Query psy6446
Match_columns 134
No_of_seqs 279 out of 1031
Neff 12.3
Searched_HMMs 29240
Date Fri Aug 16 18:07:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6446.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6446hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 3.9E-30 1.3E-34 157.4 18.8 132 1-133 187-320 (321)
2 1got_B GT-beta; complex (GTP-b 100.0 2E-29 7E-34 155.2 19.4 133 1-134 165-301 (340)
3 2ynn_A Coatomer subunit beta'; 100.0 2.8E-29 9.7E-34 152.6 19.1 132 1-133 36-171 (304)
4 3ow8_A WD repeat-containing pr 100.0 2.6E-29 8.9E-34 153.8 17.8 133 1-134 145-279 (321)
5 4gqb_B Methylosome protein 50; 100.0 5.1E-29 1.7E-33 153.8 17.2 133 1-134 193-331 (344)
6 2ynn_A Coatomer subunit beta'; 100.0 7.9E-29 2.7E-33 150.6 17.8 134 1-134 78-217 (304)
7 1vyh_C Platelet-activating fac 100.0 5.3E-29 1.8E-33 156.8 16.9 133 1-134 131-265 (410)
8 4h5i_A Guanine nucleotide-exch 100.0 1.4E-28 4.9E-33 152.8 18.5 131 1-133 158-342 (365)
9 3iz6_a 40S ribosomal protein R 100.0 2.9E-28 9.9E-33 152.1 19.1 133 1-133 181-328 (380)
10 4gqb_B Methylosome protein 50; 100.0 2E-28 6.9E-33 151.2 17.6 133 1-134 104-246 (344)
11 4g56_B MGC81050 protein; prote 100.0 9.8E-29 3.3E-33 153.2 15.5 132 1-133 205-342 (357)
12 4ery_A WD repeat-containing pr 100.0 1.1E-27 3.6E-32 145.8 19.7 133 1-134 46-180 (312)
13 1vyh_C Platelet-activating fac 100.0 3.1E-28 1.1E-32 153.2 17.5 132 1-133 257-410 (410)
14 1nr0_A Actin interacting prote 100.0 4.1E-28 1.4E-32 159.1 18.2 133 1-134 171-355 (611)
15 1got_B GT-beta; complex (GTP-b 100.0 4.3E-28 1.5E-32 149.3 16.9 130 1-131 207-340 (340)
16 2pbi_B Guanine nucleotide-bind 100.0 1.3E-27 4.3E-32 148.0 18.9 132 1-133 177-314 (354)
17 3frx_A Guanine nucleotide-bind 100.0 2.4E-27 8.1E-32 145.0 19.0 132 1-134 88-227 (319)
18 4ery_A WD repeat-containing pr 100.0 3.2E-27 1.1E-31 143.7 19.3 133 1-134 88-223 (312)
19 3iz6_a 40S ribosomal protein R 100.0 8.9E-28 3E-32 149.9 17.1 132 1-133 229-374 (380)
20 1erj_A Transcriptional repress 100.0 2.9E-27 1E-31 148.1 18.5 133 1-134 86-238 (393)
21 2pbi_B Guanine nucleotide-bind 100.0 3E-27 1E-31 146.4 17.8 130 1-131 221-354 (354)
22 2hes_X YDR267CP; beta-propelle 100.0 3.5E-27 1.2E-31 144.8 16.7 133 1-133 35-183 (330)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.5E-27 1.2E-31 145.6 16.5 133 1-133 39-180 (345)
24 2hes_X YDR267CP; beta-propelle 100.0 4.7E-27 1.6E-31 144.2 16.9 133 1-133 81-229 (330)
25 3vl1_A 26S proteasome regulato 100.0 3.2E-27 1.1E-31 148.4 16.3 133 1-134 120-278 (420)
26 3vu4_A KMHSV2; beta-propeller 100.0 2.1E-26 7.2E-31 142.6 19.1 132 1-133 82-270 (355)
27 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-26 4.4E-31 143.1 17.9 132 1-132 84-223 (345)
28 1erj_A Transcriptional repress 100.0 1.8E-26 6.1E-31 144.5 18.6 131 1-133 146-286 (393)
29 2xzm_R RACK1; ribosome, transl 100.0 2.9E-26 9.9E-31 141.3 18.6 130 1-133 99-243 (343)
30 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-26 6.8E-31 144.5 18.1 134 1-134 58-207 (402)
31 2pm7_B Protein transport prote 100.0 4.1E-26 1.4E-30 138.3 18.3 133 1-133 78-237 (297)
32 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-26 4.2E-31 142.9 15.8 130 4-134 108-244 (343)
33 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-26 4.7E-31 142.7 15.9 132 1-133 150-291 (343)
34 1nr0_A Actin interacting prote 99.9 1.2E-26 4E-31 152.2 14.8 130 2-134 131-270 (611)
35 2xzm_R RACK1; ribosome, transl 99.9 1E-25 3.4E-30 138.9 18.1 132 1-133 50-202 (343)
36 3frx_A Guanine nucleotide-bind 99.9 1.4E-25 4.9E-30 137.1 18.4 131 1-133 130-266 (319)
37 4g56_B MGC81050 protein; prote 99.9 3.8E-26 1.3E-30 141.6 16.0 134 1-134 162-301 (357)
38 2pm7_B Protein transport prote 99.9 1.9E-25 6.4E-30 135.4 18.7 133 1-133 32-188 (297)
39 2ymu_A WD-40 repeat protein; u 99.9 5.6E-26 1.9E-30 147.6 17.3 127 1-131 449-577 (577)
40 1sq9_A Antiviral protein SKI8; 99.9 8.3E-26 2.8E-30 141.0 17.4 133 1-134 208-395 (397)
41 2pm9_A Protein WEB1, protein t 99.9 1E-25 3.5E-30 141.3 17.8 134 1-134 189-337 (416)
42 4aow_A Guanine nucleotide-bind 99.9 1.4E-25 4.7E-30 137.4 17.9 131 1-134 196-337 (340)
43 3dwl_C Actin-related protein 2 99.9 4.7E-27 1.6E-31 145.9 11.3 134 1-134 78-236 (377)
44 3dwl_C Actin-related protein 2 99.9 7.5E-27 2.6E-31 145.1 11.8 133 1-133 34-176 (377)
45 2aq5_A Coronin-1A; WD40 repeat 99.9 5.3E-26 1.8E-30 142.6 15.7 133 1-134 105-254 (402)
46 3k26_A Polycomb protein EED; W 99.9 1.8E-25 6E-30 138.0 17.7 133 1-134 45-192 (366)
47 2w18_A PALB2, fancn, partner a 99.9 1.5E-25 5.2E-30 136.8 16.3 130 1-133 204-356 (356)
48 1gxr_A ESG1, transducin-like e 99.9 5E-25 1.7E-29 134.7 18.7 133 1-134 120-255 (337)
49 3f3f_A Nucleoporin SEH1; struc 99.9 2.2E-25 7.6E-30 136.4 17.1 134 1-134 82-337 (351)
50 1gxr_A ESG1, transducin-like e 99.9 5.3E-25 1.8E-29 134.5 18.6 130 1-133 206-336 (337)
51 3dm0_A Maltose-binding peripla 99.9 8.1E-26 2.8E-30 150.0 15.8 134 1-134 453-592 (694)
52 3ei3_B DNA damage-binding prot 99.9 8E-25 2.7E-29 136.3 19.2 131 1-134 142-282 (383)
53 2j04_B YDR362CP, TAU91; beta p 99.9 1.4E-25 4.7E-30 144.9 15.9 133 1-134 236-386 (524)
54 3v7d_B Cell division control p 99.9 8.6E-25 2.9E-29 139.1 18.9 131 1-134 291-421 (464)
55 3mmy_A MRNA export factor; mRN 99.9 1.8E-25 6.2E-30 137.9 15.3 130 5-134 24-160 (368)
56 3vl1_A 26S proteasome regulato 99.9 4.8E-26 1.6E-30 143.1 12.9 132 1-134 79-212 (420)
57 4a11_B DNA excision repair pro 99.9 1.3E-24 4.6E-29 135.7 18.7 134 1-134 167-365 (408)
58 3vu4_A KMHSV2; beta-propeller 99.9 4.4E-25 1.5E-29 136.7 16.4 132 1-133 160-335 (355)
59 4aez_A CDC20, WD repeat-contai 99.9 3.1E-24 1.1E-28 134.6 19.7 132 1-134 157-293 (401)
60 3mkq_A Coatomer beta'-subunit; 99.9 9.2E-25 3.1E-29 146.5 17.7 132 1-133 36-171 (814)
61 3sfz_A APAF-1, apoptotic pepti 99.9 1.7E-24 5.8E-29 150.5 19.4 132 1-133 638-773 (1249)
62 3odt_A Protein DOA1; ubiquitin 99.9 2.6E-24 9E-29 130.4 18.1 129 1-134 166-296 (313)
63 2ymu_A WD-40 repeat protein; u 99.9 2E-24 6.9E-29 140.3 18.6 129 1-133 408-538 (577)
64 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.5E-24 8.6E-29 136.8 18.5 133 1-134 126-271 (450)
65 3gre_A Serine/threonine-protei 99.9 9.4E-26 3.2E-30 142.6 11.8 132 1-134 193-359 (437)
66 3dm0_A Maltose-binding peripla 99.9 8.5E-25 2.9E-29 145.1 16.8 133 1-134 495-632 (694)
67 2oaj_A Protein SNI1; WD40 repe 99.9 3.5E-25 1.2E-29 150.4 15.1 132 1-134 80-242 (902)
68 3jrp_A Fusion protein of prote 99.9 3.7E-24 1.2E-28 132.6 18.5 134 1-134 80-240 (379)
69 3bg1_A Protein SEC13 homolog; 99.9 1.7E-25 5.9E-30 136.6 12.2 133 1-133 82-246 (316)
70 4e54_B DNA damage-binding prot 99.9 2E-25 7E-30 141.3 12.9 132 1-134 188-327 (435)
71 1r5m_A SIR4-interacting protei 99.9 3E-24 1E-28 134.6 17.7 131 1-133 228-360 (425)
72 3f3f_A Nucleoporin SEH1; struc 99.9 1.2E-24 4E-29 133.2 15.5 133 1-133 34-248 (351)
73 3i2n_A WD repeat-containing pr 99.9 2.3E-24 7.9E-29 132.7 16.3 133 1-133 91-242 (357)
74 1k8k_C P40, ARP2/3 complex 41 99.9 1.7E-24 5.9E-29 134.0 15.8 133 1-133 119-273 (372)
75 1pgu_A Actin interacting prote 99.9 3.3E-25 1.1E-29 144.6 12.8 132 1-134 468-614 (615)
76 1r5m_A SIR4-interacting protei 99.9 1.5E-24 5.3E-29 135.9 15.4 131 1-133 270-424 (425)
77 3i2n_A WD repeat-containing pr 99.9 1.6E-24 5.4E-29 133.4 15.1 133 1-134 191-353 (357)
78 4aez_A CDC20, WD repeat-contai 99.9 4.9E-24 1.7E-28 133.7 17.5 133 1-134 197-336 (401)
79 2j04_B YDR362CP, TAU91; beta p 99.9 4.3E-24 1.5E-28 138.0 17.5 132 1-133 184-341 (524)
80 2xyi_A Probable histone-bindin 99.9 7.3E-24 2.5E-28 134.1 18.2 133 1-133 255-409 (430)
81 3k26_A Polycomb protein EED; W 99.9 6.3E-25 2.2E-29 135.5 13.0 130 1-133 96-259 (366)
82 1sq9_A Antiviral protein SKI8; 99.9 2.2E-24 7.7E-29 134.6 15.6 132 1-134 149-322 (397)
83 3ei3_B DNA damage-binding prot 99.9 7.7E-24 2.6E-28 131.9 17.8 130 1-133 97-235 (383)
84 3dw8_B Serine/threonine-protei 99.9 7E-25 2.4E-29 138.6 13.2 116 18-134 175-315 (447)
85 3mmy_A MRNA export factor; mRN 99.9 5.4E-24 1.9E-28 131.3 16.6 95 1-97 65-163 (368)
86 2pm9_A Protein WEB1, protein t 99.9 5.2E-25 1.8E-29 138.1 11.9 133 1-134 46-197 (416)
87 2oaj_A Protein SNI1; WD40 repe 99.9 8.7E-25 3E-29 148.5 13.8 131 1-132 458-659 (902)
88 1k8k_C P40, ARP2/3 complex 41 99.9 5.9E-24 2E-28 131.6 16.4 133 1-133 75-232 (372)
89 4e54_B DNA damage-binding prot 99.9 6.5E-25 2.2E-29 139.0 12.4 133 1-134 143-282 (435)
90 3zwl_B Eukaryotic translation 99.9 2.6E-23 9E-28 128.3 19.0 131 1-133 198-345 (369)
91 3jrp_A Fusion protein of prote 99.9 3.5E-24 1.2E-28 132.7 15.2 133 1-133 34-190 (379)
92 2xyi_A Probable histone-bindin 99.9 1.7E-23 5.9E-28 132.4 18.4 134 1-134 152-309 (430)
93 3dw8_B Serine/threonine-protei 99.9 3.4E-24 1.2E-28 135.5 15.1 133 1-134 199-373 (447)
94 3bg1_A Protein SEC13 homolog; 99.9 1.8E-24 6.3E-29 132.1 13.3 117 17-133 10-135 (316)
95 3v7d_B Cell division control p 99.9 2.9E-23 1E-27 132.0 19.2 132 1-134 184-341 (464)
96 4aow_A Guanine nucleotide-bind 99.9 2.9E-23 9.9E-28 127.1 18.2 133 1-134 151-286 (340)
97 3zwl_B Eukaryotic translation 99.9 2.2E-23 7.7E-28 128.6 17.7 119 14-133 26-150 (369)
98 2j04_A TAU60, YPL007P, hypothe 99.9 8.9E-25 3E-29 140.7 11.4 125 3-133 67-210 (588)
99 2j04_A TAU60, YPL007P, hypothe 99.9 1.3E-23 4.5E-28 135.3 16.7 128 1-134 108-254 (588)
100 3mkq_A Coatomer beta'-subunit; 99.9 1.2E-23 4E-28 141.2 17.2 134 1-134 78-217 (814)
101 4gq1_A NUP37; propeller, trans 99.9 4.2E-24 1.4E-28 133.9 13.1 132 1-133 112-285 (393)
102 4gga_A P55CDC, cell division c 99.9 5.9E-23 2E-27 129.5 18.3 130 1-133 126-260 (420)
103 3jro_A Fusion protein of prote 99.9 6.3E-23 2.2E-27 137.4 18.1 134 1-134 78-238 (753)
104 4ggc_A P55CDC, cell division c 99.9 2.3E-22 7.8E-27 122.2 18.7 131 1-134 46-181 (318)
105 4a11_B DNA excision repair pro 99.9 2E-23 7E-28 130.3 14.2 133 2-134 25-175 (408)
106 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.5E-23 1.5E-27 131.1 15.9 130 2-132 173-337 (450)
107 3odt_A Protein DOA1; ubiquitin 99.9 2.1E-22 7E-27 122.1 18.1 128 1-134 125-255 (313)
108 1yfq_A Cell cycle arrest prote 99.9 1.3E-23 4.4E-28 128.9 12.4 130 1-134 34-179 (342)
109 3gre_A Serine/threonine-protei 99.9 3.1E-23 1E-27 131.1 13.3 133 1-134 134-292 (437)
110 3sfz_A APAF-1, apoptotic pepti 99.9 2E-22 6.7E-27 140.3 17.1 133 1-134 680-828 (1249)
111 3jro_A Fusion protein of prote 99.9 5.5E-23 1.9E-27 137.7 13.4 133 1-133 32-188 (753)
112 1pgu_A Actin interacting prote 99.9 2.9E-22 9.9E-27 130.8 16.4 129 2-134 144-283 (615)
113 1l0q_A Surface layer protein; 99.9 8.6E-22 2.9E-26 122.9 17.9 131 1-134 13-147 (391)
114 4gga_A P55CDC, cell division c 99.9 5.8E-22 2E-26 125.0 16.9 131 1-133 253-394 (420)
115 1yfq_A Cell cycle arrest prote 99.9 9.5E-23 3.2E-27 125.0 12.1 131 1-134 123-282 (342)
116 4ggc_A P55CDC, cell division c 99.9 2.3E-21 7.9E-26 117.7 17.9 131 1-133 173-314 (318)
117 1p22_A F-BOX/WD-repeat protein 99.9 2.6E-21 9E-26 122.5 18.3 128 1-134 194-325 (435)
118 1p22_A F-BOX/WD-repeat protein 99.9 5E-22 1.7E-26 125.8 14.6 126 1-133 277-413 (435)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3.7E-21 1.3E-25 122.0 17.6 128 1-133 300-441 (445)
120 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-22 5.4E-27 128.3 11.0 112 22-133 94-222 (434)
121 1l0q_A Surface layer protein; 99.9 1.3E-20 4.3E-25 117.6 18.9 131 1-134 55-189 (391)
122 2w18_A PALB2, fancn, partner a 99.9 3.3E-21 1.1E-25 117.8 15.7 133 1-134 158-314 (356)
123 2ovr_B FBW7, F-BOX/WD repeat p 99.9 8.9E-21 3E-25 120.3 18.3 126 1-133 180-307 (445)
124 3bws_A Protein LP49; two-domai 99.9 2.3E-21 8E-26 122.3 15.3 133 1-134 145-292 (433)
125 4h5i_A Guanine nucleotide-exch 99.9 5.6E-22 1.9E-26 123.3 10.8 94 2-95 247-344 (365)
126 4gq1_A NUP37; propeller, trans 99.9 3.4E-22 1.1E-26 125.3 9.7 107 28-134 97-218 (393)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-21 4.7E-26 124.0 11.7 131 1-133 119-277 (434)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.5E-20 1.2E-24 117.0 17.8 129 1-133 160-299 (415)
129 3bws_A Protein LP49; two-domai 99.9 7.5E-20 2.6E-24 115.4 17.8 129 2-133 285-431 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 2E-19 6.9E-24 113.5 16.2 131 1-134 204-344 (415)
131 3u4y_A Uncharacterized protein 99.8 1.7E-18 5.7E-23 105.9 16.4 132 1-133 21-159 (331)
132 1pby_B Quinohemoprotein amine 99.8 2E-18 6.9E-23 105.5 15.6 132 1-134 12-163 (337)
133 1nir_A Nitrite reductase; hemo 99.8 9.6E-18 3.3E-22 109.1 17.4 130 1-133 160-310 (543)
134 1ri6_A Putative isomerase YBHE 99.8 4.9E-18 1.7E-22 104.0 13.9 131 1-133 16-159 (343)
135 3vgz_A Uncharacterized protein 99.8 3E-17 1E-21 101.0 17.3 130 2-134 166-303 (353)
136 3u4y_A Uncharacterized protein 99.8 1.8E-17 6.3E-22 101.3 16.2 133 1-134 109-252 (331)
137 2ojh_A Uncharacterized protein 99.8 4.1E-18 1.4E-22 102.2 13.1 128 1-132 23-158 (297)
138 3vgz_A Uncharacterized protein 99.8 4.8E-17 1.6E-21 100.1 17.7 131 2-134 71-215 (353)
139 2ecf_A Dipeptidyl peptidase IV 99.8 1.8E-17 6E-22 110.8 14.2 119 1-122 65-226 (741)
140 1jmx_B Amine dehydrogenase; ox 99.8 2.3E-17 7.8E-22 101.3 13.5 130 1-134 22-175 (349)
141 1xfd_A DIP, dipeptidyl aminope 99.8 1.1E-17 3.6E-22 111.5 12.3 119 1-122 38-190 (723)
142 1pby_B Quinohemoprotein amine 99.8 4.1E-17 1.4E-21 99.7 13.7 89 44-134 221-310 (337)
143 3o4h_A Acylamino-acid-releasin 99.8 1.3E-17 4.4E-22 109.0 11.9 125 2-132 134-274 (582)
144 2z3z_A Dipeptidyl aminopeptida 99.8 9.9E-18 3.4E-22 111.5 11.3 131 1-134 102-293 (706)
145 1z68_A Fibroblast activation p 99.8 6.8E-18 2.3E-22 112.5 10.3 118 1-122 37-186 (719)
146 1nir_A Nitrite reductase; hemo 99.8 1.5E-16 5E-21 103.6 16.0 132 1-134 201-355 (543)
147 2ojh_A Uncharacterized protein 99.7 1.6E-16 5.4E-21 95.3 12.0 129 2-133 64-203 (297)
148 1jmx_B Amine dehydrogenase; ox 99.7 1.1E-15 3.8E-20 93.8 15.1 126 2-134 127-325 (349)
149 2ecf_A Dipeptidyl peptidase IV 99.7 2E-16 6.7E-21 105.8 12.2 110 23-134 39-181 (741)
150 1ri6_A Putative isomerase YBHE 99.7 2E-15 6.9E-20 92.4 15.0 131 2-133 108-261 (343)
151 3hfq_A Uncharacterized protein 99.7 5.8E-15 2E-19 90.9 16.9 131 2-133 65-217 (347)
152 1k32_A Tricorn protease; prote 99.7 5.6E-16 1.9E-20 107.2 13.0 130 2-134 319-461 (1045)
153 1k32_A Tricorn protease; prote 99.7 7.5E-16 2.6E-20 106.5 13.5 128 2-131 360-499 (1045)
154 1xfd_A DIP, dipeptidyl aminope 99.7 2.6E-16 9.1E-21 104.9 10.7 130 2-134 93-289 (723)
155 3hfq_A Uncharacterized protein 99.7 5.1E-15 1.7E-19 91.2 13.8 129 3-133 21-170 (347)
156 3scy_A Hypothetical bacterial 99.7 1.4E-14 4.7E-19 89.7 15.7 110 23-132 213-335 (361)
157 2z3z_A Dipeptidyl aminopeptida 99.7 7.5E-16 2.5E-20 102.6 10.0 132 1-132 142-340 (706)
158 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.4E-14 4.7E-19 90.1 14.9 132 1-133 61-223 (365)
159 3scy_A Hypothetical bacterial 99.6 5.1E-14 1.7E-18 87.2 16.1 110 24-133 158-290 (361)
160 3o4h_A Acylamino-acid-releasin 99.6 2.3E-15 7.8E-20 98.5 9.0 124 2-133 177-314 (582)
161 1z68_A Fibroblast activation p 99.6 1.3E-15 4.4E-20 101.7 7.1 106 26-133 21-138 (719)
162 4a5s_A Dipeptidyl peptidase 4 99.6 8E-15 2.7E-19 98.4 10.5 119 1-122 37-188 (740)
163 1jof_A Carboxy-CIS,CIS-muconat 99.6 6.2E-13 2.1E-17 82.7 17.6 132 2-133 121-290 (365)
164 1qks_A Cytochrome CD1 nitrite 99.6 5.4E-13 1.8E-17 87.3 17.9 99 1-102 178-283 (567)
165 4a5s_A Dipeptidyl peptidase 4 99.6 1.2E-14 4E-19 97.6 9.4 106 25-133 21-140 (740)
166 3fvz_A Peptidyl-glycine alpha- 99.6 2.8E-12 9.5E-17 78.8 18.9 132 1-133 70-226 (329)
167 1q7f_A NHL, brain tumor CG1071 99.6 8.4E-13 2.9E-17 79.4 16.4 128 2-133 144-279 (286)
168 3azo_A Aminopeptidase; POP fam 99.6 1.4E-13 4.6E-18 91.3 13.4 113 20-132 129-272 (662)
169 3pe7_A Oligogalacturonate lyas 99.6 2.5E-13 8.4E-18 84.7 13.1 131 2-133 62-224 (388)
170 2oiz_A Aromatic amine dehydrog 99.6 5.2E-13 1.8E-17 83.1 14.3 65 69-134 259-334 (361)
171 1xip_A Nucleoporin NUP159; bet 99.5 1.8E-13 6E-18 85.7 12.0 107 15-133 84-190 (388)
172 2oiz_A Aromatic amine dehydrog 99.5 1.8E-13 6.1E-18 85.2 11.3 127 2-132 33-180 (361)
173 3azo_A Aminopeptidase; POP fam 99.5 1.6E-13 5.4E-18 91.0 10.7 128 2-130 163-319 (662)
174 1q7f_A NHL, brain tumor CG1071 99.5 4.7E-12 1.6E-16 76.1 16.0 128 2-133 102-237 (286)
175 3pe7_A Oligogalacturonate lyas 99.5 3.2E-13 1.1E-17 84.2 11.2 130 2-134 170-329 (388)
176 3dsm_A Uncharacterized protein 99.5 4.3E-12 1.5E-16 78.0 15.5 130 1-134 65-212 (328)
177 3c5m_A Oligogalacturonate lyas 99.5 2.4E-12 8.2E-17 80.3 13.6 127 2-133 170-328 (396)
178 2dg1_A DRP35, lactonase; beta 99.5 2.5E-11 8.6E-16 74.3 17.1 131 2-133 68-212 (333)
179 3no2_A Uncharacterized protein 99.5 1.8E-11 6.2E-16 73.6 15.7 127 2-133 17-154 (276)
180 2xdw_A Prolyl endopeptidase; a 99.5 5.7E-12 1.9E-16 84.4 14.5 131 1-133 152-319 (710)
181 2gop_A Trilobed protease; beta 99.4 7.6E-12 2.6E-16 76.9 13.3 111 2-122 45-187 (347)
182 3fvz_A Peptidyl-glycine alpha- 99.4 1E-11 3.4E-16 76.3 13.6 130 2-133 168-321 (329)
183 3e5z_A Putative gluconolactona 99.4 9.3E-11 3.2E-15 70.8 17.5 110 22-134 173-286 (296)
184 2dg1_A DRP35, lactonase; beta 99.4 8.6E-11 2.9E-15 72.0 17.1 123 10-133 34-170 (333)
185 2xdw_A Prolyl endopeptidase; a 99.4 6.3E-12 2.2E-16 84.2 12.9 110 22-133 126-267 (710)
186 2bkl_A Prolyl endopeptidase; m 99.4 1.5E-11 5.2E-16 82.2 13.7 109 22-132 122-259 (695)
187 2bkl_A Prolyl endopeptidase; m 99.4 9.2E-12 3.2E-16 83.3 12.5 131 1-133 148-303 (695)
188 3dsm_A Uncharacterized protein 99.4 5.7E-11 1.9E-15 73.0 15.0 128 1-134 106-253 (328)
189 3no2_A Uncharacterized protein 99.4 7.5E-11 2.6E-15 70.9 15.0 128 2-133 58-194 (276)
190 3c5m_A Oligogalacturonate lyas 99.4 1.2E-12 4E-17 81.7 7.4 131 2-133 62-224 (396)
191 3e5z_A Putative gluconolactona 99.4 1.4E-10 4.8E-15 70.1 15.4 128 2-133 52-201 (296)
192 1xip_A Nucleoporin NUP159; bet 99.4 2.5E-11 8.4E-16 76.1 12.2 111 1-121 107-230 (388)
193 2mad_H Methylamine dehydrogena 99.4 2E-10 6.7E-15 71.9 16.1 126 1-132 48-194 (373)
194 3sjl_D Methylamine dehydrogena 99.4 8.1E-11 2.8E-15 73.6 14.2 102 2-105 61-180 (386)
195 1qks_A Cytochrome CD1 nitrite 99.3 3E-10 1E-14 74.6 14.0 104 29-134 164-275 (567)
196 2gop_A Trilobed protease; beta 99.3 2.5E-10 8.6E-15 70.2 12.7 121 2-131 87-250 (347)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.2E-09 4.2E-14 66.2 15.4 129 3-133 156-298 (314)
198 1yr2_A Prolyl oligopeptidase; 99.3 8.6E-10 2.9E-14 74.4 15.9 130 1-133 190-349 (741)
199 3c75_H MADH, methylamine dehyd 99.2 5E-10 1.7E-14 71.1 13.2 102 1-104 100-219 (426)
200 1rwi_B Serine/threonine-protei 99.2 6.8E-10 2.3E-14 66.0 13.3 109 24-133 153-263 (270)
201 1rwi_B Serine/threonine-protei 99.2 1.5E-09 5.1E-14 64.6 13.4 130 2-133 89-221 (270)
202 3sjl_D Methylamine dehydrogena 99.2 1E-09 3.5E-14 68.8 11.0 106 26-134 38-169 (386)
203 3dr2_A Exported gluconolactona 99.1 6.9E-09 2.4E-13 63.1 14.5 125 2-132 171-304 (305)
204 2iwa_A Glutamine cyclotransfer 99.1 6.5E-09 2.2E-13 62.1 13.9 128 2-132 88-235 (266)
205 1yr2_A Prolyl oligopeptidase; 99.1 1.1E-09 3.6E-14 74.0 11.8 109 22-133 164-302 (741)
206 2mad_H Methylamine dehydrogena 99.1 7.1E-08 2.4E-12 60.4 18.3 108 27-134 219-350 (373)
207 2z2n_A Virginiamycin B lyase; 99.1 8.7E-08 3E-12 57.5 17.4 127 2-132 122-253 (299)
208 1mda_H Methylamine dehydrogena 99.1 1E-09 3.5E-14 68.5 8.8 96 2-103 48-164 (368)
209 3hrp_A Uncharacterized protein 99.1 3.3E-08 1.1E-12 62.6 15.4 129 2-133 154-297 (409)
210 3hrp_A Uncharacterized protein 99.1 8.9E-08 3E-12 60.7 17.2 129 2-133 242-409 (409)
211 3iuj_A Prolyl endopeptidase; h 99.1 3.6E-08 1.2E-12 66.2 16.0 130 1-133 156-313 (693)
212 2z2n_A Virginiamycin B lyase; 99.1 1.2E-07 4.2E-12 56.9 17.0 127 2-133 164-294 (299)
213 3g4e_A Regucalcin; six bladed 99.1 6.2E-08 2.1E-12 58.7 15.6 126 2-132 37-178 (297)
214 2hz6_A Endoplasmic reticulum t 99.0 1.3E-11 4.3E-16 77.1 -0.7 126 2-134 21-149 (369)
215 1kb0_A Quinohemoprotein alcoho 99.0 5.3E-08 1.8E-12 65.4 16.2 132 2-134 285-507 (677)
216 2ghs_A AGR_C_1268P; regucalcin 99.0 9.8E-08 3.4E-12 58.6 16.0 124 2-133 73-209 (326)
217 2ece_A 462AA long hypothetical 99.0 5.3E-08 1.8E-12 62.0 14.7 130 2-133 166-351 (462)
218 3dr2_A Exported gluconolactona 99.0 6.4E-08 2.2E-12 58.8 14.2 126 2-133 69-223 (305)
219 1yiq_A Quinohemoprotein alcoho 99.0 8.4E-08 2.9E-12 64.5 15.8 132 2-134 277-505 (689)
220 2iwa_A Glutamine cyclotransfer 99.0 1.2E-07 4.1E-12 56.7 14.7 122 10-134 9-135 (266)
221 3nol_A Glutamine cyclotransfer 99.0 1.1E-07 3.6E-12 56.6 14.2 128 1-134 66-201 (262)
222 3g4e_A Regucalcin; six bladed 99.0 3.3E-08 1.1E-12 59.9 12.1 98 24-121 152-258 (297)
223 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.2E-07 4.1E-12 57.5 14.5 127 2-133 48-206 (314)
224 3iuj_A Prolyl endopeptidase; h 98.9 1.7E-08 6E-13 67.7 11.2 109 22-133 130-267 (693)
225 1fwx_A Nitrous oxide reductase 98.9 1.4E-07 4.8E-12 62.0 14.9 129 2-133 114-307 (595)
226 3c75_H MADH, methylamine dehyd 98.9 1.8E-08 6.1E-13 64.1 10.3 102 30-134 82-209 (426)
227 1fwx_A Nitrous oxide reductase 98.9 8.5E-08 2.9E-12 63.0 13.5 129 2-133 177-360 (595)
228 2qc5_A Streptogramin B lactona 98.9 9.6E-07 3.3E-11 53.0 17.1 127 2-132 43-174 (300)
229 2qc5_A Streptogramin B lactona 98.9 8.8E-07 3E-11 53.2 16.5 128 2-132 127-258 (300)
230 3nol_A Glutamine cyclotransfer 98.9 3.4E-07 1.2E-11 54.4 14.1 117 2-122 109-242 (262)
231 3nok_A Glutaminyl cyclase; bet 98.9 3.9E-07 1.3E-11 54.3 13.7 117 2-122 118-253 (268)
232 3mbr_X Glutamine cyclotransfer 98.9 1.2E-06 4.2E-11 51.6 15.7 128 1-134 44-179 (243)
233 2qe8_A Uncharacterized protein 98.9 5.1E-07 1.7E-11 55.8 14.9 130 2-132 95-276 (343)
234 2ghs_A AGR_C_1268P; regucalcin 98.8 1.1E-06 3.7E-11 54.0 15.6 98 23-121 181-288 (326)
235 2hz6_A Endoplasmic reticulum t 98.8 2.6E-10 8.7E-15 71.3 -0.9 127 1-134 60-192 (369)
236 1mda_H Methylamine dehydrogena 98.8 3.3E-08 1.1E-12 61.8 8.5 88 43-133 47-157 (368)
237 3mbr_X Glutamine cyclotransfer 98.8 1.1E-06 3.9E-11 51.7 14.4 117 2-122 87-221 (243)
238 3nok_A Glutaminyl cyclase; bet 98.7 5.1E-06 1.7E-10 49.6 16.6 118 11-134 44-164 (268)
239 2ece_A 462AA long hypothetical 98.7 7.4E-06 2.5E-10 52.5 16.2 132 2-134 45-237 (462)
240 3hxj_A Pyrrolo-quinoline quino 98.7 3.6E-06 1.2E-10 51.3 14.1 123 2-132 119-242 (330)
241 2xe4_A Oligopeptidase B; hydro 98.6 7.3E-07 2.5E-11 60.6 11.4 108 23-133 176-303 (751)
242 3q7m_A Lipoprotein YFGL, BAMB; 98.6 2.4E-06 8.2E-11 53.3 12.9 123 2-131 251-375 (376)
243 2qe8_A Uncharacterized protein 98.6 1.8E-06 6E-11 53.4 12.1 113 20-133 17-153 (343)
244 3tc9_A Hypothetical hydrolase; 98.6 1.4E-05 4.9E-10 51.0 16.4 129 2-132 161-299 (430)
245 3q7m_A Lipoprotein YFGL, BAMB; 98.6 8E-06 2.7E-10 50.9 14.8 128 2-134 65-207 (376)
246 2ad6_A Methanol dehydrogenase 98.6 7.1E-06 2.4E-10 54.3 14.8 133 2-134 274-494 (571)
247 1kv9_A Type II quinohemoprotei 98.6 9.3E-06 3.2E-10 54.6 15.1 132 2-134 272-488 (668)
248 1kb0_A Quinohemoprotein alcoho 98.6 1.3E-05 4.3E-10 54.1 15.4 101 2-102 192-354 (677)
249 3amr_A 3-phytase; beta-propell 98.5 3.1E-05 1.1E-09 48.1 15.0 129 2-133 52-209 (355)
250 1flg_A Protein (quinoprotein e 98.4 6.6E-05 2.3E-09 49.9 15.6 133 2-134 293-516 (582)
251 3hxj_A Pyrrolo-quinoline quino 98.4 3.6E-05 1.2E-09 46.9 13.1 123 2-132 159-282 (330)
252 2fp8_A Strictosidine synthase; 98.3 9.4E-05 3.2E-09 45.3 17.0 128 2-133 167-312 (322)
253 1w6s_A Methanol dehydrogenase 98.3 0.00015 5E-09 48.4 15.2 132 2-134 280-503 (599)
254 4hw6_A Hypothetical protein, I 98.3 0.00019 6.4E-09 46.0 16.0 129 2-132 164-302 (433)
255 2xe4_A Oligopeptidase B; hydro 98.3 3.1E-05 1.1E-09 52.8 11.9 129 2-133 203-353 (751)
256 1npe_A Nidogen, entactin; glyc 98.3 0.00013 4.3E-09 43.4 19.0 130 2-133 60-197 (267)
257 2fp8_A Strictosidine synthase; 98.2 0.00021 7.3E-09 43.7 16.4 107 24-133 83-215 (322)
258 2ad6_A Methanol dehydrogenase 98.2 6.3E-05 2.2E-09 49.8 11.5 79 41-121 443-523 (571)
259 1k3i_A Galactose oxidase precu 98.2 0.00037 1.3E-08 46.9 15.3 109 26-134 191-323 (656)
260 3kya_A Putative phosphatase; s 98.1 0.00049 1.7E-08 44.9 15.7 129 2-132 164-339 (496)
261 1flg_A Protein (quinoprotein e 98.1 0.00012 4.1E-09 48.7 11.7 78 41-120 465-544 (582)
262 1yiq_A Quinohemoprotein alcoho 98.1 3.1E-05 1.1E-09 52.4 9.0 77 2-79 457-533 (689)
263 1npe_A Nidogen, entactin; glyc 98.1 0.00041 1.4E-08 41.2 19.0 108 24-133 125-237 (267)
264 1ijq_A LDL receptor, low-densi 98.0 0.00053 1.8E-08 42.0 17.9 131 2-133 12-151 (316)
265 2p4o_A Hypothetical protein; p 98.0 0.00054 1.9E-08 41.6 17.4 120 10-133 22-146 (306)
266 3v65_B Low-density lipoprotein 98.0 0.00077 2.6E-08 42.5 16.3 130 2-133 98-233 (386)
267 1kv9_A Type II quinohemoprotei 98.0 0.0004 1.4E-08 46.9 12.8 131 2-134 129-333 (668)
268 3tc9_A Hypothetical hydrolase; 97.9 0.0012 3.9E-08 42.4 13.2 106 25-133 141-256 (430)
269 3sov_A LRP-6, low-density lipo 97.8 0.0015 5E-08 40.2 16.2 131 2-133 15-153 (318)
270 2p9w_A MAL S 1 allergenic prot 97.8 0.0018 6.3E-08 40.1 16.6 109 24-133 66-214 (334)
271 3v64_C Agrin; beta propeller, 97.8 0.002 6.7E-08 40.1 17.8 130 2-133 55-190 (349)
272 3p5b_L Low density lipoprotein 97.7 0.0032 1.1E-07 40.0 17.7 131 2-133 94-233 (400)
273 3qqz_A Putative uncharacterize 97.7 0.0022 7.6E-08 38.2 14.8 108 23-131 123-250 (255)
274 3qqz_A Putative uncharacterize 97.7 0.0023 7.7E-08 38.2 13.9 110 21-131 27-150 (255)
275 1w6s_A Methanol dehydrogenase 97.7 0.0028 9.7E-08 42.4 12.4 100 2-103 75-200 (599)
276 3v64_C Agrin; beta propeller, 97.7 0.0033 1.1E-07 39.1 16.9 107 26-133 121-233 (349)
277 3v65_B Low-density lipoprotein 97.6 0.0042 1.4E-07 39.2 17.3 107 26-133 164-276 (386)
278 1n7d_A LDL receptor, low-densi 97.5 0.00053 1.8E-08 46.6 7.8 130 2-132 388-526 (699)
279 4a2l_A BT_4663, two-component 97.5 0.0055 1.9E-07 42.2 12.4 107 23-133 175-290 (795)
280 3m0c_C LDL receptor, low-densi 97.5 0.012 4.2E-07 40.8 17.7 131 2-133 406-545 (791)
281 3pbp_A Nucleoporin NUP82; beta 97.5 0.0081 2.8E-07 38.6 17.0 106 21-129 67-207 (452)
282 3sbq_A Nitrous-oxide reductase 97.4 0.01 3.5E-07 39.6 12.4 120 2-122 300-452 (638)
283 4a2l_A BT_4663, two-component 97.4 0.013 4.3E-07 40.5 15.8 106 22-132 407-524 (795)
284 1n7d_A LDL receptor, low-densi 97.4 0.0047 1.6E-07 42.1 10.6 106 25-132 500-612 (699)
285 1k3i_A Galactose oxidase precu 97.4 0.0057 1.9E-07 41.3 10.9 96 26-123 404-529 (656)
286 3pbp_A Nucleoporin NUP82; beta 97.3 0.014 4.8E-07 37.6 14.4 103 28-133 28-157 (452)
287 3p5b_L Low density lipoprotein 97.2 0.015 5E-07 37.0 18.6 108 25-133 163-276 (400)
288 1ijq_A LDL receptor, low-densi 97.2 0.012 4.2E-07 36.0 18.5 107 25-133 81-194 (316)
289 3s94_A LRP-6, low-density lipo 97.2 0.022 7.4E-07 38.5 15.7 130 2-132 20-157 (619)
290 3amr_A 3-phytase; beta-propell 97.2 0.017 5.8E-07 36.2 13.5 107 26-133 133-262 (355)
291 2ism_A Putative oxidoreductase 97.2 0.017 5.7E-07 36.1 11.7 99 20-122 31-152 (352)
292 3v9f_A Two-component system se 97.1 0.023 7.9E-07 39.1 12.3 107 22-133 408-523 (781)
293 4hw6_A Hypothetical protein, I 97.1 0.02 6.9E-07 36.8 17.4 131 2-133 252-432 (433)
294 3ei3_A DNA damage-binding prot 97.1 0.039 1.3E-06 40.0 14.9 128 2-132 494-634 (1158)
295 2p4o_A Hypothetical protein; p 97.1 0.016 5.4E-07 35.2 15.9 127 2-133 55-197 (306)
296 2xzh_A Clathrin heavy chain 1; 96.9 0.031 1.1E-06 34.9 13.3 92 1-95 88-190 (365)
297 1tl2_A L10, protein (tachylect 96.9 0.0047 1.6E-07 36.2 6.1 99 23-128 43-157 (236)
298 2g8s_A Glucose/sorbosone dehyd 96.9 0.033 1.1E-06 34.8 13.9 103 19-122 17-147 (353)
299 3a9g_A Putative uncharacterize 96.8 0.042 1.4E-06 34.3 13.9 100 20-122 29-152 (354)
300 3sov_A LRP-6, low-density lipo 96.8 0.04 1.4E-06 33.9 16.9 106 25-132 126-236 (318)
301 3m0c_C LDL receptor, low-densi 96.7 0.079 2.7E-06 36.9 18.5 107 26-133 476-588 (791)
302 3sre_A PON1, serum paraoxonase 96.7 0.047 1.6E-06 34.3 16.1 106 26-133 117-251 (355)
303 2p9w_A MAL S 1 allergenic prot 96.6 0.053 1.8E-06 33.7 11.8 109 23-131 15-165 (334)
304 3kya_A Putative phosphatase; s 96.6 0.071 2.4E-06 35.1 12.0 108 25-133 143-277 (496)
305 1tl2_A L10, protein (tachylect 96.5 0.022 7.4E-07 33.5 7.0 66 64-132 41-114 (236)
306 4a0p_A LRP6, LRP-6, low-densit 96.4 0.11 3.9E-06 35.1 16.9 129 2-132 17-153 (628)
307 3v9f_A Two-component system se 96.4 0.13 4.4E-06 35.5 15.4 107 22-133 451-567 (781)
308 1bpo_A Protein (clathrin); cla 96.3 0.11 3.7E-06 33.9 14.6 92 1-95 87-189 (494)
309 4a0p_A LRP6, LRP-6, low-densit 96.1 0.19 6.4E-06 34.1 19.0 107 26-133 85-196 (628)
310 2xbg_A YCF48-like protein; pho 95.7 0.17 5.8E-06 31.1 13.2 103 25-130 126-230 (327)
311 3ii7_A Kelch-like protein 7; p 95.7 0.16 5.6E-06 30.7 13.2 128 2-134 26-178 (306)
312 3sre_A PON1, serum paraoxonase 95.6 0.22 7.4E-06 31.4 13.6 95 24-122 168-284 (355)
313 3das_A Putative oxidoreductase 95.5 0.23 7.8E-06 31.2 14.1 103 18-121 30-156 (347)
314 2xzh_A Clathrin heavy chain 1; 95.3 0.27 9.3E-06 30.9 11.8 88 40-133 47-134 (365)
315 2xn4_A Kelch-like protein 2; s 95.2 0.26 8.9E-06 29.7 11.3 128 2-134 126-276 (302)
316 2be1_A Serine/threonine-protei 95.1 0.11 3.6E-06 32.5 6.5 101 2-104 22-140 (339)
317 4gq2_M Nucleoporin NUP120; bet 95.0 0.45 1.5E-05 34.0 9.8 38 65-102 237-274 (950)
318 2vpj_A Kelch-like protein 12; 94.9 0.31 1.1E-05 29.3 13.7 130 2-134 130-278 (301)
319 1xi4_A Clathrin heavy chain; a 94.8 0.31 1.1E-05 36.6 8.8 92 1-95 87-189 (1630)
320 4asc_A Kelch repeat and BTB do 94.8 0.35 1.2E-05 29.4 12.0 96 2-99 119-226 (315)
321 1zgk_A Kelch-like ECH-associat 94.8 0.34 1.2E-05 29.3 11.9 128 2-134 139-287 (308)
322 2be1_A Serine/threonine-protei 94.8 0.015 5.2E-07 36.2 2.1 69 33-102 11-84 (339)
323 1cru_A Protein (soluble quinop 94.7 0.5 1.7E-05 30.7 14.6 103 19-122 26-161 (454)
324 3ei3_A DNA damage-binding prot 94.2 1.1 3.9E-05 32.8 14.2 126 2-132 866-997 (1158)
325 3ii7_A Kelch-like protein 7; p 94.1 0.54 1.8E-05 28.4 12.8 130 2-134 72-225 (306)
326 3s25_A Hypothetical 7-bladed b 94.1 0.57 2E-05 28.7 13.2 88 26-122 109-201 (302)
327 2zwa_A Leucine carboxyl methyl 94.0 0.98 3.4E-05 31.1 12.4 131 2-134 414-577 (695)
328 1bpo_A Protein (clathrin); cla 94.0 0.81 2.8E-05 30.0 12.4 88 40-133 46-133 (494)
329 2wg3_C Hedgehog-interacting pr 93.9 0.81 2.8E-05 29.9 14.5 105 18-123 12-157 (463)
330 2xbg_A YCF48-like protein; pho 93.8 0.68 2.3E-05 28.5 15.6 104 23-128 165-273 (327)
331 2vpj_A Kelch-like protein 12; 93.7 0.63 2.2E-05 28.0 14.7 131 2-134 33-184 (301)
332 3s94_A LRP-6, low-density lipo 93.6 1.1 3.7E-05 30.5 17.4 108 25-133 88-201 (619)
333 3sbq_A Nitrous-oxide reductase 93.5 0.63 2.2E-05 31.5 7.6 70 64-133 323-407 (638)
334 2zwa_A Leucine carboxyl methyl 93.5 1.2 4.1E-05 30.7 12.8 133 2-134 470-635 (695)
335 3zwu_A Alkaline phosphatase PH 93.4 0.74 2.5E-05 31.2 7.9 57 66-122 478-548 (592)
336 2ism_A Putative oxidoreductase 92.8 1.1 3.6E-05 28.0 10.5 67 63-132 30-112 (352)
337 2xn4_A Kelch-like protein 2; s 92.7 0.95 3.2E-05 27.2 12.1 128 2-134 79-229 (302)
338 1zgk_A Kelch-like ECH-associat 92.6 1 3.4E-05 27.3 10.6 128 2-134 92-240 (308)
339 4fhn_B Nucleoporin NUP120; pro 91.7 0.3 1E-05 35.5 4.8 38 65-102 239-276 (1139)
340 2woz_A Kelch repeat and BTB do 91.5 1.5 5.1E-05 26.7 11.8 94 2-98 129-235 (318)
341 4asc_A Kelch repeat and BTB do 90.8 1.7 5.9E-05 26.3 11.6 101 31-134 98-221 (315)
342 3a9g_A Putative uncharacterize 90.3 2.2 7.5E-05 26.7 10.3 50 64-115 29-83 (354)
343 3das_A Putative oxidoreductase 90.2 2.3 7.8E-05 26.8 10.5 53 63-115 31-90 (347)
344 3f7f_A Nucleoporin NUP120; nuc 90.2 0.96 3.3E-05 31.4 5.8 31 73-103 229-259 (729)
345 3zwu_A Alkaline phosphatase PH 90.1 1.9 6.6E-05 29.3 7.1 55 26-81 481-548 (592)
346 1cru_A Protein (soluble quinop 89.8 2.9 9.8E-05 27.3 10.5 53 63-115 26-87 (454)
347 4a9v_A PHOX; hydrolase, beta-p 89.8 3.4 0.00012 28.1 8.7 59 64-122 476-548 (592)
348 1xi4_A Clathrin heavy chain; a 88.6 4.8 0.00017 30.8 8.5 87 41-133 47-133 (1630)
349 2woz_A Kelch repeat and BTB do 88.5 2.8 9.5E-05 25.4 10.9 101 31-134 109-231 (318)
350 4a9v_A PHOX; hydrolase, beta-p 87.4 3.8 0.00013 27.9 7.0 56 26-82 481-549 (592)
351 2uvk_A YJHT; unknown function, 85.5 4.7 0.00016 24.9 10.8 39 2-41 88-128 (357)
352 3s25_A Hypothetical 7-bladed b 85.1 4.8 0.00016 24.7 12.4 97 26-132 58-174 (302)
353 3ott_A Two-component system se 82.8 9.8 0.00033 26.4 14.8 105 23-133 148-259 (758)
354 4gq2_M Nucleoporin NUP120; bet 82.4 2.9 9.8E-05 30.1 5.0 30 25-54 240-269 (950)
355 4fhn_B Nucleoporin NUP120; pro 79.8 2.9 9.8E-05 30.7 4.4 29 26-54 243-271 (1139)
356 3q6k_A 43.2 kDa salivary prote 75.1 14 0.00047 23.7 15.9 130 2-133 125-305 (381)
357 3f7f_A Nucleoporin NUP120; nuc 74.0 7.3 0.00025 27.3 4.9 30 22-53 223-252 (729)
358 2uvk_A YJHT; unknown function, 71.5 15 0.00052 22.6 13.0 47 85-132 168-224 (357)
359 3mez_B Mannose-specific lectin 71.0 8.7 0.0003 19.6 8.0 13 80-92 62-74 (113)
360 3q6k_A 43.2 kDa salivary prote 68.6 20 0.0007 23.0 7.0 70 65-134 88-190 (381)
361 3mez_A Mannose-specific lectin 61.8 14 0.00049 18.8 4.4 16 78-93 53-68 (111)
362 1q47_A Semaphorin 3A; beta pro 51.6 51 0.0018 22.0 9.0 57 33-89 422-487 (495)
363 2g8s_A Glucose/sorbosone dehyd 49.3 46 0.0016 20.8 9.6 66 64-129 271-349 (353)
364 1olz_A Semaphorin 4D; developm 44.8 78 0.0027 22.2 6.5 56 33-88 416-476 (663)
365 4gz8_A Semaphorin-3A; multi-do 40.2 95 0.0033 21.8 5.9 57 33-89 430-495 (667)
366 4h3o_A Lectin; cadmium, plant 38.7 39 0.0013 16.9 7.6 15 79-93 55-69 (105)
367 3nvq_A Semaphorin-7A; beta-pro 38.4 97 0.0033 21.4 6.9 57 33-89 381-444 (590)
368 3a0c_A Mannose/sialic acid-bin 36.9 43 0.0015 16.9 8.4 42 78-120 54-97 (110)
369 1suu_A DNA gyrase subunit A; t 36.3 76 0.0026 19.6 12.6 101 31-132 113-229 (312)
370 3uc1_A DNA gyrase subunit A; D 34.9 83 0.0029 19.6 13.0 113 18-131 93-225 (327)
371 3ol2_B Plexin-B1; beta-propell 33.2 1.1E+02 0.0039 20.7 8.5 67 23-89 389-461 (528)
372 1b2p_A Protein (lectin); manno 33.0 53 0.0018 16.9 7.2 42 78-120 64-107 (119)
373 1wp5_A Topoisomerase IV; broke 30.1 1E+02 0.0035 19.2 12.4 113 19-132 91-223 (323)
374 2hc5_A ORF 99, hypothetical pr 29.6 50 0.0017 17.2 2.4 17 2-18 71-87 (117)
375 3dzw_A Agglutinin; lectin, man 28.9 61 0.0021 16.2 7.7 15 78-92 53-67 (109)
376 1zvt_A Topoisomerase IV subuni 26.8 1.1E+02 0.0036 18.3 10.3 69 64-132 84-161 (256)
377 1uhe_A Aspartate 1-decarboxyla 26.7 69 0.0024 16.1 2.5 16 2-17 19-34 (97)
378 3oky_B Putative uncharacterize 25.5 1.7E+02 0.0058 20.2 8.5 68 23-90 405-496 (565)
379 1vc3_B L-aspartate-alpha-decar 25.3 74 0.0025 16.0 2.5 16 2-17 20-35 (96)
380 3no0_A DNA gyrase subunit A; D 24.6 1.2E+02 0.0042 18.3 11.9 111 20-132 116-244 (276)
381 3oky_A Plexin-A2; transmembran 24.4 1.9E+02 0.0066 20.5 7.1 66 24-89 402-475 (681)
382 3plx_B Aspartate 1-decarboxyla 24.2 81 0.0028 16.1 2.5 16 2-17 20-35 (102)
383 3mwp_A Nucleoprotein; structur 24.2 16 0.00056 24.0 0.0 18 80-97 162-179 (577)
384 3b7f_A Glycosyl hydrolase, BNR 22.0 1.6E+02 0.0053 18.5 11.1 53 32-85 22-77 (394)
385 3ge2_A Lipoprotein, putative; 20.6 1.1E+02 0.0037 16.2 2.9 22 105-126 83-104 (130)
386 4gz8_A Semaphorin-3A; multi-do 20.2 1.5E+02 0.0051 20.9 3.9 24 23-46 472-495 (667)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.98 E-value=3.9e-30 Score=157.44 Aligned_cols=132 Identities=25% Similarity=0.442 Sum_probs=118.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++++..++.+...+.+++|+|++++|++++.|+.|++||+++... ...+.+|...|.+++|+|++++|++
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~sp~~~~l~s 265 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL-AGTLSGHASWVLNVAFCPDDTHFVS 265 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce-eEEEcCCCCceEEEEECCCCCEEEE
Confidence 489999999999999986555566699999999999999999999999987654 4567899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.|+.|++||+.+++++..+. +...|.+++|+|++.+|+++ .|+.|++||..
T Consensus 266 ~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 266 SSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999888875 67889999999999988875 78999999974
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=2e-29 Score=155.23 Aligned_cols=133 Identities=22% Similarity=0.374 Sum_probs=117.3
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++++..+.++...+.+++|+|+++++++|+.|+.|++||++++.. ...+.+|...|.+++|+|+++.+++
T Consensus 165 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~p~~~~l~s 243 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC-RQTFTGHESDINAICFFPNGNAFAT 243 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE-EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred cEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee-EEEEcCCcCCEEEEEEcCCCCEEEE
Confidence 589999999999999986555666699999999999999999999999988654 4567899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEecC---CCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFG---AVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||+++++....+.+. ..+.+++|+|++++++++ .|+.|++||+.+
T Consensus 244 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence 999999999999998888777654 368999999999999886 689999999753
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=2.8e-29 Score=152.56 Aligned_cols=132 Identities=18% Similarity=0.294 Sum_probs=114.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++.+..+..+...+.++.|+|++++|++|+.|+.|++||+.++.. ...+.+|...|.+++|+|+++++++
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s 114 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK-VVDFEAHPDYIRSIAVHPTKPYVLS 114 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECSSSSEEEE
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE-EEEEeCCCCcEEEEEEcCCCCEEEE
Confidence 489999999999999986666666699999999999999999999999998664 4567899999999999999999999
Q ss_pred eeCCCcEEEEecCCCcee-EEEe-cCCCCeEEEEcc-CCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEV-QKLE-FGAVPNSLEISR-DGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~-~~~~-~~~~v~~~~~~~-~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.|+.|++||++++... ..+. +...|.+++|+| ++..++++ .|+.|++||++
T Consensus 115 gs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 115 GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp EETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred ECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999887544 3343 577899999999 56777765 78999999985
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.6e-29 Score=153.81 Aligned_cols=133 Identities=19% Similarity=0.302 Sum_probs=118.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++....+..+...+.+++|+|++++|++++.|+.|++||+++++. ...+.+|...|.+++|+|++++|++
T Consensus 145 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~spd~~~l~s 223 (321)
T 3ow8_A 145 KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQLLVT 223 (321)
T ss_dssp EEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCCCEEEECTTSCEEEE
T ss_pred cEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE-EEEEcccCCceeEEEEcCCCCEEEE
Confidence 378999999999888886666666699999999999999999999999988654 4567889999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||+++++....+. +...|.+++|+|++.+++++ .|+.|++||+++
T Consensus 224 ~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp ECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 9999999999999988887776 57789999999999988875 789999999864
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=5.1e-29 Score=153.83 Aligned_cols=133 Identities=15% Similarity=0.132 Sum_probs=110.5
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC-C
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN-T 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 76 (134)
+|++||++++++...+. .+...+.+++|+| ++++|++|+.|+.|++||+++++. ...+.+|...|.+++|+|++ +
T Consensus 193 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~fsp~g~~ 271 (344)
T 4gqb_B 193 RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC-VLSSAVHSQCVTGLVFSPHSVP 271 (344)
T ss_dssp CEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C-CEEEECCSSCEEEEEECSSSSC
T ss_pred ccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE-EEEEcCCCCCEEEEEEccCCCe
Confidence 58999999999988775 3344455699999 567889999999999999998665 46789999999999999987 5
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCc-EEEE-ecCCeEEEEeCCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGT-TITV-THGSCVTFLDANS 134 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~-~~~~~i~i~d~~t 134 (134)
+|++++.|+.|++||+.+++......|...|.+++|+|++. ++++ +.|++|++|++.+
T Consensus 272 ~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 272 FLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp CEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 78999999999999999988777666888999999999986 4555 4699999999863
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=7.9e-29 Score=150.60 Aligned_cols=134 Identities=17% Similarity=0.241 Sum_probs=115.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 79 (134)
+|++||+.+++++..++.+...+.+++|+|++++|++|+.|+.|++||++++......+.+|...|.+++|+| ++..++
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEE
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEE
Confidence 4899999999999999966666666999999999999999999999999876555567889999999999999 678999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEcc--CCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISR--DGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l~~~-~~~~i~i~d~~t 134 (134)
+++.|+.|++||++++.....+. +...+..+.|+| ++.+++++ .|+.|++||+++
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~ 217 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT
T ss_pred EEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC
Confidence 99999999999998887766665 346788899987 66788765 789999999864
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=5.3e-29 Score=156.76 Aligned_cols=133 Identities=20% Similarity=0.354 Sum_probs=118.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++.+..++++...+.+++|+|++++|++|+.|+.|++||+.+... ...+.+|...|.+++|+|+++++++
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~-~~~~~~h~~~V~~v~~~p~~~~l~s 209 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC-IRTMHGHDHNVSSVSIMPNGDHIVS 209 (410)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE-EECCCCCSSCEEEEEECSSSSEEEE
T ss_pred eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 589999999999999996666666699999999999999999999999987553 3457889999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||++++.+...+. +...+.++.++|++.+++++ .|+.|++||+++
T Consensus 210 ~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999999999999999888776 56789999999999998876 689999999863
No 8
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.4e-28 Score=152.83 Aligned_cols=131 Identities=13% Similarity=0.150 Sum_probs=107.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCC-------------------------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAE------------------------- 55 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~------------------------- 55 (134)
+|+|||+.+++++..+++...+.. ++|+|+|+++++++.++ +.+|+..++...
T Consensus 158 ~i~iwd~~~~~~~~~~~~~~~V~~-v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~ 235 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETRGEVKD-LHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLI 235 (365)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCE-EEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEE
T ss_pred EEEEeECCCCcEEEEeCCCCceEE-EEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEE
Confidence 489999999999999987777666 99999999999998665 555554322110
Q ss_pred --------------------------CeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe--cCCCC
Q psy6446 56 --------------------------PTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE--FGAVP 107 (134)
Q Consensus 56 --------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~v 107 (134)
...+.+|...|.+++|+|++++|++++.|+.|++||+.+++++..+. |...|
T Consensus 236 ~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 236 AASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAI 315 (365)
T ss_dssp EEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCE
T ss_pred EEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCE
Confidence 00134567789999999999999999999999999999999988764 68899
Q ss_pred eEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 108 NSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 108 ~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
.+++|+|||++|+++ .|++|+|||+.
T Consensus 316 ~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 316 TEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 999999999999976 68999999985
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=2.9e-28 Score=152.06 Aligned_cols=133 Identities=22% Similarity=0.390 Sum_probs=114.2
Q ss_pred CeeEeecCCCceeeEE-----eeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC
Q psy6446 1 MGTVWDAVSGEELHSF-----QHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 74 (134)
+|++||+.+++.+..+ .++...+.++.|++ +++.|++|+.|+.|++||++........+.+|.+.|.+++|+|+
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~ 260 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD 260 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC
Confidence 5899999999998877 33334445599987 88999999999999999998655566788999999999999999
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEecC--------CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLEFG--------AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++|++++.|+.|++||+++++.+..+... ..+.+++|+|+|++++++ .||.|++||+.
T Consensus 261 ~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 261 GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 999999999999999999999888777532 237899999999999987 68999999974
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=2e-28 Score=151.16 Aligned_cols=133 Identities=22% Similarity=0.392 Sum_probs=110.7
Q ss_pred CeeEeecCCCceeeEEe----eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQ----HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
+|+|||+.+++.+..++ ++...+.+++|+|++++|++|+.|+.|++||+.++.. ...+.+|...|.+++|+|++.
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~-~~~~~~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV-LSSYRAHAAQVTCVAASPHKD 182 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECSSCT
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-EEEEcCcCCceEEEEecCCCC
Confidence 48999999988655443 4555666699999999999999999999999998654 467889999999999999875
Q ss_pred -EEEEeeCCCcEEEEecCCCceeEEEe---cCCCCeEEEEccCC-cEEEEe-cCCeEEEEeCCC
Q psy6446 77 -RLISCAEDKTVRLWDVSASAEVQKLE---FGAVPNSLEISRDG-TTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 77 -~l~~~~~d~~i~~~d~~~~~~~~~~~---~~~~v~~~~~~~~~-~~l~~~-~~~~i~i~d~~t 134 (134)
.+++++.|+.|++||+++++....+. +...+.+++|+|++ .+++++ .|+.|++||+++
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred CceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 67899999999999999998887764 34568899999965 677765 689999999864
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=9.8e-29 Score=153.17 Aligned_cols=132 Identities=19% Similarity=0.249 Sum_probs=113.3
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEccC-CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC-C
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFATD-SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN-T 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 76 (134)
+|++||+++++++..+. .....+.+++|+|+ +.+|++|+.|+.|++||++++.. ...+.+|...|.+++|+|++ +
T Consensus 205 ~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~-~~~~~~~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 205 RILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS-AQTSAVHSQNITGLAYSYHSSP 283 (357)
T ss_dssp CEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG-CEEECCCSSCEEEEEECSSSSC
T ss_pred ceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE-eEEEeccceeEEEEEEcCCCCC
Confidence 58999999998877665 33445566999996 56888999999999999998654 46788999999999999987 5
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEcc-CCcEEEEe-cCCeEEEEeCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISR-DGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~~~~i~i~d~~ 133 (134)
+|++++.|+.|++||+++++.+..+.|...|.+++|+| ++.+|+++ .|+.|++||+.
T Consensus 284 ~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 78999999999999999999888888899999999998 78888765 78999999985
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.1e-27 Score=145.84 Aligned_cols=133 Identities=23% Similarity=0.407 Sum_probs=118.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||..+++....+..+...+.+++|+|++++|++++.|+.|++||+.++.. ...+.+|...|.+++|+|+++++++
T Consensus 46 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s 124 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVS 124 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECSSSSEEEE
T ss_pred eEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcE-EEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 489999999999988886666666699999999999999999999999998654 4567899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||+++++....+. +..++.+++|+|++.+++++ .|+.|++||+++
T Consensus 125 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 125 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 9999999999999999888776 56789999999999988875 689999999863
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=3.1e-28 Score=153.24 Aligned_cols=132 Identities=22% Similarity=0.386 Sum_probs=116.3
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccC--------------------CcEEEEecCCCeEEEEECCCCCCCCeEEe
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATD--------------------SYRLATGSNDKNIRIYDLNKPDAEPTVYR 60 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 60 (134)
+|++||+.++++...+..+...+.++.|+|+ +.+|++|+.|+.|++||++++.. ...+.
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~-~~~~~ 335 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC-LMTLV 335 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE-EEEEE
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce-EEEEE
Confidence 5899999999999999866667777999996 66899999999999999998654 35678
Q ss_pred CCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 61 GHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 61 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+|...|.+++|+|++++|++++.|+.|++||+.++++...+. |...|.+++|+|++.+++++ .|+.|++||++
T Consensus 336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999999999999999999999999998888876 67889999999999988875 78999999974
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=4.1e-28 Score=159.09 Aligned_cols=133 Identities=18% Similarity=0.292 Sum_probs=113.2
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEE-e------CCCCCEeEEEEee
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVY-R------GHSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-~------~~~~~v~~~~~~~ 73 (134)
+|++||..+++++..+.++...+.+++|+|++++|++++.|+.|++||+.++... ..+ . +|.+.|.+++|+|
T Consensus 171 ~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~-~~~~~~~~~~~~h~~~V~~v~~sp 249 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT-GVFEDDSLKNVAHSGSVFGLTWSP 249 (611)
T ss_dssp CEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-EECBCTTSSSCSSSSCEEEEEECT
T ss_pred eEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEe-eeeccccccccccCCCEEEEEECC
Confidence 5899999999999899866666666999999999999999999999999876543 233 2 7999999999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeEEEe--------------------------------------------cCCCCeE
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASAEVQKLE--------------------------------------------FGAVPNS 109 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--------------------------------------------~~~~v~~ 109 (134)
++++|++++.|++|++||+.++++...+. |...|.+
T Consensus 250 dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~ 329 (611)
T 1nr0_A 250 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITA 329 (611)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEE
Confidence 99999999999999999998876654332 4567899
Q ss_pred EEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 110 LEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 110 ~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++|+|++++++++ .|+.|++||+++
T Consensus 330 l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 330 LSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 9999999999876 689999999863
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=4.3e-28 Score=149.33 Aligned_cols=130 Identities=22% Similarity=0.372 Sum_probs=111.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe--CCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR--GHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l 78 (134)
+|++||+.+++++..+..+...+.+++|+|+++.|++++.|+.|++||+++.... ..+. .+...|.+++|+|+++++
T Consensus 207 ~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 207 SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL-MTYSHDNIICGITSVSFSKSGRLL 285 (340)
T ss_dssp CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-EEECCTTCCSCEEEEEECTTSSEE
T ss_pred cEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE-EEEccCCcccceEEEEECCCCCEE
Confidence 5899999999999999866666666999999999999999999999999875433 2222 233479999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
++++.|+.|++||+.+++....+. |...|.+++|+|++.+|+++ .|+.|++||
T Consensus 286 ~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999988887776 67899999999999988875 689999997
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=1.3e-27 Score=148.03 Aligned_cols=132 Identities=21% Similarity=0.357 Sum_probs=114.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+|++||+.+++++..+.++...+.++.|+| +++.|++|+.|+.|++||++++.. ...+.+|...|.+++|+|+++.+
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~p~~~~l 255 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC-VQAFETHESDVNSVRYYPSGDAF 255 (354)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEE
T ss_pred cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE-EEEecCCCCCeEEEEEeCCCCEE
Confidence 489999999999999986666666699987 578999999999999999998654 45678999999999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEecC---CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEFG---AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++++.|+.|++||++.++....+... ..+.+++|+|++.+++++ .|+.|++||+.
T Consensus 256 ~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 256 ASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 99999999999999988877666533 357899999999999886 68999999985
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=2.4e-27 Score=144.97 Aligned_cols=132 Identities=22% Similarity=0.363 Sum_probs=114.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN------ 74 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~------ 74 (134)
+|++||+.+++++..+.++...+.+++|+|+++.|++++.|+.|++||++.. ....+.+|...+.++.++|.
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--CLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--EEEEECCCSSCEEEEEECCC------
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eEEEEeccCCcEEEEEEccCCCCCCC
Confidence 4899999999999999866666666999999999999999999999999752 34567889999999999985
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+..+++++.|+.|++||+++.+....+. +...|.+++|+|++++++++ .|+.|++||+++
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 4489999999999999999988777665 67889999999999999876 689999999864
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=3.2e-27 Score=143.69 Aligned_cols=133 Identities=20% Similarity=0.352 Sum_probs=116.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++++..+..+...+.++.|+|++++|++++.|+.|++||++++.. ...+..|...|.+++|+|+++.+++
T Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE-EEEecCCCCcEEEEEEcCCCCEEEE
Confidence 478999999999999986666666699999999999999999999999988654 3567889999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||+++++....+. +...+..++|+|++++++++ .|+.|++||+++
T Consensus 167 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999999999999998877764 34578899999999988876 689999999863
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=8.9e-28 Score=149.86 Aligned_cols=132 Identities=20% Similarity=0.309 Sum_probs=110.6
Q ss_pred CeeEeecC-CCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC-------CCCEeEEEEe
Q psy6446 1 MGTVWDAV-SGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH-------SSGIKHVQFF 72 (134)
Q Consensus 1 ~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-------~~~v~~~~~~ 72 (134)
+|++||++ .++.+..+.++...+.+++|+|+++.|++++.|+.|++||++++... ..+..+ ...+.+++|+
T Consensus 229 ~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s 307 (380)
T 3iz6_a 229 TVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL-QVYNREPDRNDNELPIVTSVAFS 307 (380)
T ss_dssp CEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE-EEECCCCSSSCCSSCSCSEEEEC
T ss_pred eEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE-EEecccccccccccCceEEEEEC
Confidence 58999997 55777888855555666999999999999999999999999986533 233322 2358999999
Q ss_pred eCCCEEEEeeCCCcEEEEecCCCceeEEEe-----cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 73 KNNTRLISCAEDKTVRLWDVSASAEVQKLE-----FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 73 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|+++++++++.|+.|++||+..++....+. |...|.+++|+|+|.+|+++ .|+.|++|++.
T Consensus 308 ~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 308 ISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred CCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 999999999999999999999988877763 56789999999999999986 68999999985
No 20
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=2.9e-27 Score=148.09 Aligned_cols=133 Identities=26% Similarity=0.450 Sum_probs=115.5
Q ss_pred CeeEeecCCCceeeEEeeCC------------------CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPH------------------IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH 62 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~ 62 (134)
++++|++.+++.+..+..+. ..+.+++|+|++++|++|+.|+.|++||+.++.. ...+.+|
T Consensus 86 ~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~-~~~~~~h 164 (393)
T 1erj_A 86 TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKI-VMILQGH 164 (393)
T ss_dssp CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCC
T ss_pred cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE-EEEEccC
Confidence 47899999999888775322 1256699999999999999999999999987553 4567899
Q ss_pred CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEcc-CCcEEEEe-cCCeEEEEeCCC
Q psy6446 63 SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISR-DGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~~~~i~i~d~~t 134 (134)
...|.+++|+|+++.|++++.|+.|++||++++++...+.+...+.+++|+| ++.+++++ .|+.|++||+++
T Consensus 165 ~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~ 238 (393)
T 1erj_A 165 EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 238 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 9999999999999999999999999999999999988888888899999999 88888876 689999999753
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=3e-27 Score=146.36 Aligned_cols=130 Identities=25% Similarity=0.384 Sum_probs=111.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC--CCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG--HSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l 78 (134)
+|++||+++++++..+..+...+.+++|+|+++.|++++.|+.|++||++..... ..+.. +...+.+++|+|+++++
T Consensus 221 ~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~-~~~~~~~~~~~~~~~~~s~~g~~l 299 (354)
T 2pbi_B 221 KAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV-AIYSKESIIFGASSVDFSLSGRLL 299 (354)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-EEECCTTCCSCEEEEEECTTSSEE
T ss_pred eEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE-EEEcCCCcccceeEEEEeCCCCEE
Confidence 5899999999999999865666666999999999999999999999999875432 23332 23478999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
++++.|+.|++||+.+++.+..+. |...|.+++|+|++++|+++ .|+.|++|+
T Consensus 300 ~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 300 FAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999998887765 67899999999999988876 689999996
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.5e-27 Score=144.84 Aligned_cols=133 Identities=16% Similarity=0.234 Sum_probs=101.8
Q ss_pred CeeEeecCCC--ceeeEEe-e-CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC------CCCeEEeCCCCCEeEEE
Q psy6446 1 MGTVWDAVSG--EELHSFQ-H-PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD------AEPTVYRGHSSGIKHVQ 70 (134)
Q Consensus 1 ~i~v~d~~~~--~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~~~~v~~~~ 70 (134)
+|++||+.++ +.+..+. . +...+.+++|+|++++|++++.|+.|++|++.... .....+.+|...|.+++
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 114 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVA 114 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEE
T ss_pred EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEE
Confidence 5899999875 3455552 2 45556669999999999999999999999986421 12345678999999999
Q ss_pred EeeCCCEEEEeeCCCcEEEEecCCC----ceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 71 FFKNNTRLISCAEDKTVRLWDVSAS----AEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~~d~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|+|++++|++++.|+.|++||++.. +++..+. +...|.+++|+|++.+|+++ .|+.|++||.+
T Consensus 115 ~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 115 WSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDY 183 (330)
T ss_dssp ECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999999999999999532 3344444 57889999999999998876 68999999864
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=3.5e-27 Score=145.59 Aligned_cols=133 Identities=18% Similarity=0.270 Sum_probs=108.6
Q ss_pred CeeEeecCCCceeeE--E-eeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC-CCCeEEeCCCCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHS--F-QHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD-AEPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
+|+|||+.+++.... + .++...+.+++|+|++++|++++.|+.+++|++.... .....+.+|...|.+++|+|+++
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 118 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN 118 (345)
T ss_dssp CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS
T ss_pred eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC
Confidence 589999988765432 2 3455556669999999999999999999999987653 23456789999999999999999
Q ss_pred EEEEeeCCCcEEEEecCCCcee---EEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEV---QKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~---~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+|++++.|+.|++||+.++... ..+. +...+.+++|+|++.+++++ .|+.|++||.+
T Consensus 119 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 9999999999999999876533 3332 56789999999999988875 68999999974
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.7e-27 Score=144.24 Aligned_cols=133 Identities=23% Similarity=0.290 Sum_probs=105.1
Q ss_pred CeeEeecCC-------CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC---CCeEEeCCCCCEeEEE
Q psy6446 1 MGTVWDAVS-------GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA---EPTVYRGHSSGIKHVQ 70 (134)
Q Consensus 1 ~i~v~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~---~~~~~~~~~~~v~~~~ 70 (134)
+|++||+.. .+++..+.++...+.+++|+|++++|++++.|+.|++||++.... ....+.+|...|.+++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 589999853 345667775555666699999999999999999999999954322 2345678999999999
Q ss_pred EeeCCCEEEEeeCCCcEEEEecCCC--ceeEEEe-cCCCCeEEEEccC--CcEEEEe-cCCeEEEEeCC
Q psy6446 71 FFKNNTRLISCAEDKTVRLWDVSAS--AEVQKLE-FGAVPNSLEISRD--GTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~~d~~~~--~~~~~~~-~~~~v~~~~~~~~--~~~l~~~-~~~~i~i~d~~ 133 (134)
|+|++++|++++.|+.|++||..++ +++..+. |...|.+++|+|+ +..++++ .|+.|++||++
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 9999999999999999999998776 4555554 6788999999998 5677765 78999999974
No 25
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=3.2e-27 Score=148.38 Aligned_cols=133 Identities=17% Similarity=0.249 Sum_probs=113.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++....+..+...+.+++|+|++++|++++.|+.|++||+.++... ..+.+|...|.+++|+|+++.|++
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s 198 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP-RTLIGHRATVTDIAIIDRGRNVLS 198 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC-EEEECCSSCEEEEEEETTTTEEEE
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc-eEEcCCCCcEEEEEEcCCCCEEEE
Confidence 4899999999888887655556666999999999999999999999999986654 567899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEec-------------------------CCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEF-------------------------GAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~-------------------------~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||+++++....+.. ...+.+++|+|++++++++ .||.|++||+++
T Consensus 199 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 199 ASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp EETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT
T ss_pred EcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 99999999999999988887752 2445566678899888876 689999999864
No 26
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=2.1e-26 Score=142.63 Aligned_cols=132 Identities=18% Similarity=0.298 Sum_probs=108.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCC-----------------------------------cEEEE--ecCCCe
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDS-----------------------------------YRLAT--GSNDKN 43 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~l~~--~~~d~~ 43 (134)
+|++||..+++++..+.+...+.. +.|+++. ..+++ |+.+|.
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~~v~~-v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~ 160 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKVDAPVKD-LFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQ 160 (355)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEE-EEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTC
T ss_pred EEEEEECCCCcEEEEEECCCceEE-EEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcE
Confidence 478999999988888876655444 7776542 23443 678899
Q ss_pred EEEEECCCCCC--------------C-CeEEeCCCCCEeEEEEeeCCCEEEEeeCCCc-EEEEecCCCceeEEEe---cC
Q psy6446 44 IRIYDLNKPDA--------------E-PTVYRGHSSGIKHVQFFKNNTRLISCAEDKT-VRLWDVSASAEVQKLE---FG 104 (134)
Q Consensus 44 v~i~~~~~~~~--------------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~~d~~~~~~~~~~~---~~ 104 (134)
|++||+.++.. + ...+.+|.+.|.+++|+|++++|++++.|++ |++||+++++++..+. +.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 99999987541 1 4678899999999999999999999999998 9999999999999987 77
Q ss_pred CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 105 AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 105 ~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
..|.+++|+|++++++++ .|+.|++||++
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 899999999999999876 68999999985
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.3e-26 Score=143.06 Aligned_cols=132 Identities=22% Similarity=0.325 Sum_probs=110.2
Q ss_pred CeeEeecCCCc--eeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCC--CeEEeCCCCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGE--ELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAE--PTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~ 76 (134)
+|++||..++. ++..+.++...+.+++|+|++++|++++.|+.|++||+++.... ...+.+|...|.+++|+|+++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 57899988764 56677766666666999999999999999999999999875432 345678999999999999999
Q ss_pred EEEEeeCCCcEEEEecCCCcee--EEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEV--QKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
+|++++.|+.|++||..+++.. ..+. +...|.+++|+|++++|+++ .|+.|++||.
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 9999999999999999877543 3333 57889999999999998876 7899999985
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=1.8e-26 Score=144.53 Aligned_cols=131 Identities=20% Similarity=0.357 Sum_probs=112.3
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 79 (134)
+|++||+.+++.+..+.++...+.+++|+|+++.|++++.|+.|++||++++... ..+ .+...+..++|+| ++++++
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~-~~~-~~~~~v~~~~~~~~~~~~l~ 223 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS-LTL-SIEDGVTTVAVSPGDGKYIA 223 (393)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-EEE-ECSSCEEEEEECSTTCCEEE
T ss_pred eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE-EEE-EcCCCcEEEEEECCCCCEEE
Confidence 5899999999999999866666666999999999999999999999999886543 233 3667899999999 899999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe--------cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE--------FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.|+.|++||+++++....+. +...|.+++|+|++++++++ .|+.|++||++
T Consensus 224 ~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 224 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp EEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 99999999999999988777662 46789999999999998876 68999999985
No 29
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=2.9e-26 Score=141.32 Aligned_cols=130 Identities=17% Similarity=0.255 Sum_probs=107.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEE---eCCCCCEeEEEEeeCC--
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVY---RGHSSGIKHVQFFKNN-- 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~-- 75 (134)
+|++||+.+++.+..+.++...+.+++|+|+++.|++++.|+.|++||+.... . ... .+|...|.+++|+|++
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~-~~~~~~~~~~~~v~~~~~~~~~~~ 176 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-K-FSSAEKENHSDWVSCVRYSPIMKS 176 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-E-EECCTTTSCSSCEEEEEECCCCCS
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-e-eeeecccCCCceeeeeeecccccc
Confidence 48999999999999998665666669999999999999999999999987421 1 111 2688899999999986
Q ss_pred --------CEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 76 --------TRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 76 --------~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
.++++++.|+.|++||. ..+....+. +...|.+++|+|++++|+++ .|+.|++||++
T Consensus 177 ~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 177 ANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred ccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 78999999999999994 444444444 67889999999999999876 68999999983
No 30
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=2e-26 Score=144.48 Aligned_cols=134 Identities=18% Similarity=0.263 Sum_probs=113.2
Q ss_pred CeeEeecCCCc----eeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCC------CCCeEEeCCCCCEeEE
Q psy6446 1 MGTVWDAVSGE----ELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPD------AEPTVYRGHSSGIKHV 69 (134)
Q Consensus 1 ~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~~~~v~~~ 69 (134)
+|+|||+.+.. .+..+.++...+.+++|+| ++++|++++.||.|++|++.++. .....+.+|...|.++
T Consensus 58 ~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 137 (402)
T 2aq5_A 58 AFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIV 137 (402)
T ss_dssp CEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEE
T ss_pred EEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEE
Confidence 47899986542 3444555556666699999 99999999999999999998863 3456788999999999
Q ss_pred EEeeCC-CEEEEeeCCCcEEEEecCCCceeEEEe---cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 70 QFFKNN-TRLISCAEDKTVRLWDVSASAEVQKLE---FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 70 ~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+|+|++ +.+++++.|+.|++||+.+++....+. +...+.+++|+|++.+++++ .|+.|++||+++
T Consensus 138 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 138 AWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp EECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred EECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 999997 699999999999999999999988883 67889999999999888875 789999999864
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=4.1e-26 Score=138.25 Aligned_cols=133 Identities=14% Similarity=0.287 Sum_probs=107.9
Q ss_pred CeeEeecCCCc--eeeEEeeCCCceeeEEEccC--CcEEEEecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeC-
Q psy6446 1 MGTVWDAVSGE--ELHSFQHPHIVKSSVHFATD--SYRLATGSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKN- 74 (134)
Q Consensus 1 ~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~- 74 (134)
+|++||+.+++ .+..+..+...+.+++|+|+ +.+|++++.|+.|++||++.... ....+.+|...|.+++|+|+
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 48999998874 45566645555666999997 88999999999999999987532 23567899999999999996
Q ss_pred ------------CCEEEEeeCCCcEEEEecCCCc----eeEEEe-cCCCCeEEEEccCC---cEEEEe-cCCeEEEEeCC
Q psy6446 75 ------------NTRLISCAEDKTVRLWDVSASA----EVQKLE-FGAVPNSLEISRDG---TTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 75 ------------~~~l~~~~~d~~i~~~d~~~~~----~~~~~~-~~~~v~~~~~~~~~---~~l~~~-~~~~i~i~d~~ 133 (134)
++.|++++.|+.|++||+++++ ....+. |...|.+++|+|++ .+++++ .|+.|++||++
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 5789999999999999998765 333443 67889999999985 677765 68999999975
No 32
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.2e-26 Score=142.94 Aligned_cols=130 Identities=11% Similarity=0.099 Sum_probs=105.6
Q ss_pred EeecCCCceeeEEe-eCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCCCCeEE-eCCCCCEeEEEEeeCCCEEE
Q psy6446 4 VWDAVSGEELHSFQ-HPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDAEPTVY-RGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 4 v~d~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~ 79 (134)
+||..+++.+..+. .+...+.+++|+| +++++++++.||.|++||++++... ... ..+...+.+++|+|++++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~-~~~~~~~~~~i~~~~~~pdg~~la 186 (343)
T 3lrv_A 108 ILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY-IVHSAKSDVEYSSGVLHKDSLLLA 186 (343)
T ss_dssp EEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE-EEECCCSSCCCCEEEECTTSCEEE
T ss_pred EeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE-EEEecCCCCceEEEEECCCCCEEE
Confidence 34555777666665 3334455599999 9999999999999999999986653 333 34556899999999999999
Q ss_pred EeeCCCcEEEEecCCCcee-EEEe--cCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEV-QKLE--FGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~-~~~~--~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
+|+.|+.|++||+++++.. ..+. |...|.+++|+|++.+++++.++.|++||+++
T Consensus 187 sg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~ 244 (343)
T 3lrv_A 187 LYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRK 244 (343)
T ss_dssp EECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTS
T ss_pred EEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCC
Confidence 9999999999999998877 5554 57899999999999999988777999999864
No 33
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-26 Score=142.73 Aligned_cols=132 Identities=18% Similarity=0.204 Sum_probs=106.6
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC-CCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-HSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 78 (134)
+|++||+.+++++.... +....+.+++|+|++.+|++|+.||.|++||++++......+.. |.+.|.+++|+|++.+|
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEE
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEE
Confidence 58999999999877664 44444666999999999999999999999999987765356677 99999999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe----cCCCC--eEEEEccCCcEEEEe-c-CCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE----FGAVP--NSLEISRDGTTITVT-H-GSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~----~~~~v--~~~~~~~~~~~l~~~-~-~~~i~i~d~~ 133 (134)
++++ ++.|++||+++++....+. +...+ .+++|+|++++++++ . ++.+++|+++
T Consensus 230 ~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 230 VVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp EEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 9999 4599999999887654332 11223 469999999999984 4 8999999874
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=1.2e-26 Score=152.22 Aligned_cols=130 Identities=17% Similarity=0.259 Sum_probs=110.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|++|| +++.+..+.++...+.+++|+|++. .|++++.|+.+++||..+.+ ....+.+|...|.+++|+|++++|++
T Consensus 131 v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-~~~~l~~H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 131 VFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-FKSTFGEHTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp EEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-EeeeeccccCceEEEEECCCCCEEEE
Confidence 44555 5666777776666666799999986 59999999999999987654 34567899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEE--------ecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKL--------EFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||+.+++....+ .|...|.+++|+|++++|+++ .|++|++||+++
T Consensus 208 ~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 208 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 999999999999999888777 367789999999999998875 789999999863
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=1e-25 Score=138.91 Aligned_cols=132 Identities=14% Similarity=0.273 Sum_probs=107.3
Q ss_pred CeeEeecCCC-------ceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee
Q psy6446 1 MGTVWDAVSG-------EELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 73 (134)
+|++||+.++ .+...+.++...+.+++|+|++.++++++.|+.|++||++++.. ...+.+|...|.+++|+|
T Consensus 50 ~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~-~~~~~~h~~~v~~v~~sp 128 (343)
T 2xzm_R 50 TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTT-YKRFVGHQSEVYSVAFSP 128 (343)
T ss_dssp CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCE-EEEEECCCSCEEEEEECS
T ss_pred EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcE-EEEEcCCCCcEEEEEECC
Confidence 5899999753 35566776666666699999999999999999999999998654 456789999999999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeEEE---ecCCCCeEEEEccCC----------cEEEEe-cCCeEEEEeCC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASAEVQKL---EFGAVPNSLEISRDG----------TTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~~~-~~~~i~i~d~~ 133 (134)
+++++++++.|+.|++||+......... .+...+.+++|+|++ .+++++ .|+.|++||.+
T Consensus 129 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 202 (343)
T 2xzm_R 129 DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN 202 (343)
T ss_dssp STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC
Confidence 9999999999999999999743322222 245678999999987 567764 78999999953
No 36
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.4e-25 Score=137.09 Aligned_cols=131 Identities=20% Similarity=0.298 Sum_probs=113.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccC------CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATD------SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 74 (134)
+|++||+. ++++..+.++...+.++.|.|. +..+++++.|+.|++||+++... ...+.+|...|.+++|+|+
T Consensus 130 ~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 130 TIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI-EADFIGHNSNINTLTASPD 207 (319)
T ss_dssp CEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE-EEEECCCCSCEEEEEECTT
T ss_pred eEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh-heeecCCCCcEEEEEEcCC
Confidence 58999986 5667777755555666999984 44899999999999999987543 3567899999999999999
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+++|++++.|+.|++||+.+++.+..+.....+.+++|+|++.+++++.++.+++|+++
T Consensus 208 g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~ 266 (319)
T 3frx_A 208 GTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLD 266 (319)
T ss_dssp SSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEET
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeC
Confidence 99999999999999999999999999888889999999999999999888889999875
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=3.8e-26 Score=141.58 Aligned_cols=134 Identities=16% Similarity=0.192 Sum_probs=112.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCCCe-EEeCCCCCEeEEEEeeC-CCE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAEPT-VYRGHSSGIKHVQFFKN-NTR 77 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~-~~~ 77 (134)
+|++||+.+++++..++.+...+.+++|+|++. .+++++.|+.|++||+++++.... ....+...+.+++|+|+ +.+
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~ 241 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT 241 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce
Confidence 589999999999999986666666699999774 788999999999999988664432 23456778999999996 567
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCC-cEEEEe-cCCeEEEEeCCC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDG-TTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~-~~~~i~i~d~~t 134 (134)
+++++.|+.|++||+++++....+. +...|.+++|+|++ ++|+++ .|+.|++||+++
T Consensus 242 la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 242 FACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp EEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred EEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 8899999999999999999888876 56789999999997 567665 689999999864
No 38
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=1.9e-25 Score=135.38 Aligned_cols=133 Identities=14% Similarity=0.122 Sum_probs=107.5
Q ss_pred CeeEeecCC--CceeeEEeeCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCC-CCCeEEeCCCCCEeEEEEeeC-
Q psy6446 1 MGTVWDAVS--GEELHSFQHPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPD-AEPTVYRGHSSGIKHVQFFKN- 74 (134)
Q Consensus 1 ~i~v~d~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~~v~~~~~~~~- 74 (134)
+|++||+.+ ++++..+.++...+.+++|+| ++++|++++.|+.|++||+.++. .....+.+|...|.+++|+|+
T Consensus 32 ~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 111 (297)
T 2pm7_B 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE 111 (297)
T ss_dssp CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG
T ss_pred EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC
Confidence 589999974 467788886666666699986 48999999999999999998754 234556789999999999997
Q ss_pred -CCEEEEeeCCCcEEEEecCCCce--eEEE-ecCCCCeEEEEccC-------------CcEEEEe-cCCeEEEEeCC
Q psy6446 75 -NTRLISCAEDKTVRLWDVSASAE--VQKL-EFGAVPNSLEISRD-------------GTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 75 -~~~l~~~~~d~~i~~~d~~~~~~--~~~~-~~~~~v~~~~~~~~-------------~~~l~~~-~~~~i~i~d~~ 133 (134)
++.|++++.|+.|++||++++.. ...+ .+...+.+++|+|+ +++|+++ .|+.|++||++
T Consensus 112 ~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~ 188 (297)
T 2pm7_B 112 YGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (297)
T ss_dssp GCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEE
T ss_pred CCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc
Confidence 88999999999999999987632 2222 36778999999997 4577765 78999999975
No 39
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=5.6e-26 Score=147.60 Aligned_cols=127 Identities=25% Similarity=0.450 Sum_probs=109.2
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||. +++.+..+..+...+.+++|+|++++|++++.|+.|++|+... . ....+.+|...|.+++|+|++++|++
T Consensus 449 ~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~-~-~~~~~~~h~~~v~~l~~s~dg~~l~s 525 (577)
T 2ymu_A 449 TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-Q-LLQTLTGHSSSVRGVAFSPDGQTIAS 525 (577)
T ss_dssp EEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS-C-EEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred EEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC-C-EEEEEeCCCCCEEEEEEcCCCCEEEE
Confidence 4789995 5777888885556666699999999999999999999999643 3 44678899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
++.|+.|++||. +++++..+. |...|.+++|+||+++|+++ .|+.|++||
T Consensus 526 ~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 526 ASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999996 567766665 67899999999999988865 789999997
No 40
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=8.3e-26 Score=141.04 Aligned_cols=133 Identities=17% Similarity=0.239 Sum_probs=116.2
Q ss_pred CeeEeecCCCceeeEEee---C---CCceeeEEEccCCcEEEEecCC---CeEEEEECCCCCCCCeEEeC----------
Q psy6446 1 MGTVWDAVSGEELHSFQH---P---HIVKSSVHFATDSYRLATGSND---KNIRIYDLNKPDAEPTVYRG---------- 61 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~---------- 61 (134)
+|++||+.+++++..+.. + ...+.+++|+|++++|++++.| +.|++||++++.. ...+.+
T Consensus 208 ~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~-~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER-IGSLSVPTHSSQASLG 286 (397)
T ss_dssp EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE-EEEECBC--------C
T ss_pred cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc-cceeccCccccccccc
Confidence 378999999999998886 5 5666669999999999999999 9999999988654 345666
Q ss_pred ---CCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-------c---------------CCCCeEEEEccCC
Q psy6446 62 ---HSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-------F---------------GAVPNSLEISRDG 116 (134)
Q Consensus 62 ---~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-------~---------------~~~v~~~~~~~~~ 116 (134)
|...|.+++|+|++++|++++.|+.|++||+.+++.+..+. + ...|.+++|+|++
T Consensus 287 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 287 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred ccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 89999999999999999999999999999999999988887 3 6789999999998
Q ss_pred ----------cEEEEe-cCCeEEEEeCCC
Q psy6446 117 ----------TTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 117 ----------~~l~~~-~~~~i~i~d~~t 134 (134)
.+++++ .||.|++||+++
T Consensus 367 ~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 367 WRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccccccccccceEEEecCCCcEEEEEcCC
Confidence 677765 689999999864
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1e-25 Score=141.28 Aligned_cols=134 Identities=18% Similarity=0.349 Sum_probs=116.6
Q ss_pred CeeEeecCCCceeeEEeeC------CCceeeEEEccCC-cEEEEecCCC---eEEEEECCCCCCCCeEEe-CCCCCEeEE
Q psy6446 1 MGTVWDAVSGEELHSFQHP------HIVKSSVHFATDS-YRLATGSNDK---NIRIYDLNKPDAEPTVYR-GHSSGIKHV 69 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~l~~~~~d~---~v~i~~~~~~~~~~~~~~-~~~~~v~~~ 69 (134)
+|++||+.+++.+..+..+ ...+.+++|+|++ .++++++.|+ .|++||+++.......+. +|...|.++
T Consensus 189 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~ 268 (416)
T 2pm9_A 189 FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSL 268 (416)
T ss_dssp CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEE
T ss_pred CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEE
Confidence 4899999999999888853 5556669999987 6899999998 999999998655556667 899999999
Q ss_pred EEee-CCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCC-cEEEEe-cCCeEEEEeCCC
Q psy6446 70 QFFK-NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDG-TTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 70 ~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~-~~~~i~i~d~~t 134 (134)
+|+| +++++++++.|+.|++||+++++.+..+. +...+.+++|+|++ .+++++ .|+.|++||+++
T Consensus 269 ~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 269 DWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp EECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred EeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 9999 89999999999999999999999888876 57889999999998 788775 689999999863
No 42
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=1.4e-25 Score=137.42 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=108.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++++..+..+...+.+++|+|++++|++|+.|+.|++||+++.... ..+. +...+..+.|+|++. +++
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~-~~~~-~~~~v~~~~~~~~~~-~~~ 272 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL-YTLD-GGDIINALCFSPNRY-WLC 272 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE-EEEE-CSSCEEEEEECSSSS-EEE
T ss_pred EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCcee-eeec-CCceEEeeecCCCCc-eee
Confidence 4889999999999998866666666999999999999999999999999986543 3344 456899999999875 456
Q ss_pred eeCCCcEEEEecCCCceeEEEe----------cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE----------FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||++++.....+. +...|.+++|+|++++|+++ .||.|++||++|
T Consensus 273 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 273 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 6679999999999887766553 35678999999999999876 789999999875
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=4.7e-27 Score=145.95 Aligned_cols=134 Identities=14% Similarity=0.202 Sum_probs=101.2
Q ss_pred CeeEeecCCCc---eeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC--CCeEEeC-CCCCEeEEEEeeC
Q psy6446 1 MGTVWDAVSGE---ELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA--EPTVYRG-HSSGIKHVQFFKN 74 (134)
Q Consensus 1 ~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~-~~~~v~~~~~~~~ 74 (134)
+|++||+.+++ +...+..+...+.+++|+|+++.|++++.|+.|++||+++... ....+.. |...|.+++|+|+
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 58999999877 5555555555566699999999999999999999999988653 3455666 9999999999999
Q ss_pred CCEEEEeeCCCcEEEEecCC------------------CceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 75 NTRLISCAEDKTVRLWDVSA------------------SAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++++++++.|+.|++||+.. ++....+.+...+.+++|+|++++++++ .|+.|++||+++
T Consensus 158 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999852 3344444567789999999999988875 789999999863
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=7.5e-27 Score=145.06 Aligned_cols=133 Identities=14% Similarity=0.207 Sum_probs=105.1
Q ss_pred CeeEeecCCC--ceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC--CCCeEEeCCCCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSG--EELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD--AEPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
+|++||+.++ +++..+..+...+.+++|+|++++|++++.|+.|++||+.++. .....+.+|...|.+++|+|+++
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 113 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNED 113 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSS
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCC
Confidence 4889999988 6777787556666669999999999999999999999998865 22344668999999999999999
Q ss_pred EEEEeeCCCcEEEEecCCCce---eEEEe--cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAE---VQKLE--FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~---~~~~~--~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
.|++++.|+.|++||+++++. ...+. +...+.+++|+|++++++++ .|+.|++||++
T Consensus 114 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 114 KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 999999999999999998763 55555 67889999999999988875 68999999974
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=5.3e-26 Score=142.55 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=113.9
Q ss_pred CeeEeecCCC-------ceeeEEeeCCCceeeEEEccCC-cEEEEecCCCeEEEEECCCCCCCCeEE--eCCCCCEeEEE
Q psy6446 1 MGTVWDAVSG-------EELHSFQHPHIVKSSVHFATDS-YRLATGSNDKNIRIYDLNKPDAEPTVY--RGHSSGIKHVQ 70 (134)
Q Consensus 1 ~i~v~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~--~~~~~~v~~~~ 70 (134)
+|++||+.++ +++..+.++...+.+++|+|++ +.|++++.|+.|++||+.++... ..+ .+|...|.+++
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~ 183 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV-LTLGPDVHPDTIYSVD 183 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE-EEECTTTCCSCEEEEE
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc-EEEecCCCCCceEEEE
Confidence 4899999987 6677888666666669999998 69999999999999999986543 455 67999999999
Q ss_pred EeeCCCEEEEeeCCCcEEEEecCCCceeEEE-e-cCC-CCeEEEEccCCcEEEEe----cCCeEEEEeCCC
Q psy6446 71 FFKNNTRLISCAEDKTVRLWDVSASAEVQKL-E-FGA-VPNSLEISRDGTTITVT----HGSCVTFLDANS 134 (134)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~-~~~-~v~~~~~~~~~~~l~~~----~~~~i~i~d~~t 134 (134)
|+|+++.|++++.|+.|++||+++++....+ . +.. .+.++.|+|++.+++++ .++.|++||+++
T Consensus 184 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 184 WSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp ECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred ECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc
Confidence 9999999999999999999999999988887 3 333 38999999999999887 579999999863
No 46
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=1.8e-25 Score=137.96 Aligned_cols=133 Identities=20% Similarity=0.259 Sum_probs=114.8
Q ss_pred CeeEeecCCCceeeEEee-----CCCceeeEEEccC----CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQH-----PHIVKSSVHFATD----SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQF 71 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~ 71 (134)
.|++||+.+++.+..+.. +...+.+++|+|+ +++|++++.||.|++||+.++.. ...+.+|...|.+++|
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~i~~~~~ 123 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC-IKHYVGHGNAINELKF 123 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE-EEEEESCCSCEEEEEE
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE-eeeecCCCCcEEEEEE
Confidence 378999998888777762 2344666999998 67999999999999999988654 4567889999999999
Q ss_pred ee-CCCEEEEeeCCCcEEEEecCCCceeEEE----ecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 72 FK-NNTRLISCAEDKTVRLWDVSASAEVQKL----EFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 72 ~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+| +++.+++++.|+.|++||+++++....+ .+...+.+++|+|++.+++++ .|+.|++||+++
T Consensus 124 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 124 HPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred CCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 99 8999999999999999999999988887 367889999999999988876 689999999864
No 47
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=1.5e-25 Score=136.75 Aligned_cols=130 Identities=8% Similarity=0.095 Sum_probs=98.0
Q ss_pred CeeEeecCCCceeeEEe-eCC--CceeeEEEccCCcEE------------EEecCCCeEEEEECCCCCCCCeEE-----e
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPH--IVKSSVHFATDSYRL------------ATGSNDKNIRIYDLNKPDAEPTVY-----R 60 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~l------------~~~~~d~~v~i~~~~~~~~~~~~~-----~ 60 (134)
+|+|||+.+|++++++. ++. ..+.+++|+|+|..+ ++|+.|+.+++||..++.... .+ .
T Consensus 204 TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~-v~~~~~p~ 282 (356)
T 2w18_A 204 NIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVG-VMLYCLPP 282 (356)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEE-EEEECCCT
T ss_pred cEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEE-EEEeeccC
Confidence 58999999999999997 332 234447899999876 567889999999998765432 22 3
Q ss_pred CCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCC-CeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 61 GHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAV-PNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 61 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~-v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+|...+.+..+ ++..+++++.|++|++||+.+++++.++. +... +.+++|+|+|++|+++ .|++|++||+.
T Consensus 283 Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 283 GQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 56555443333 48889999999999999999999999987 4444 4568999999999987 68999999963
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=5e-25 Score=134.65 Aligned_cols=133 Identities=23% Similarity=0.346 Sum_probs=115.7
Q ss_pred CeeEeecCCCc--eeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGE--ELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+|++||+.+++ ....+..+...+.+++|+|+++.+++++.|+.+++||++++.. ...+..|...+.+++|+|+++.+
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l 198 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISNDGTKL 198 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSSEE
T ss_pred cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce-eeeeecccCceEEEEECCCCCEE
Confidence 37899999887 4555665556666699999999999999999999999988653 45677899999999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++++.|+.+++||+++++....+.+...+.+++|+|++.+++++ .++.|++||+++
T Consensus 199 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 199 WTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred EEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 99999999999999999999888888999999999999998876 689999999863
No 49
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=2.2e-25 Score=136.36 Aligned_cols=134 Identities=19% Similarity=0.292 Sum_probs=107.6
Q ss_pred CeeEeecCCC---------ceeeEEeeCCCceeeEEEccC--CcEEEEecCCCeEEEEECCCCCCC--------------
Q psy6446 1 MGTVWDAVSG---------EELHSFQHPHIVKSSVHFATD--SYRLATGSNDKNIRIYDLNKPDAE-------------- 55 (134)
Q Consensus 1 ~i~v~d~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~-------------- 55 (134)
+|++||+.++ +++..+..+...+.+++|+|+ +++|++++.|+.|++||++++...
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 5899999887 556677655555666999999 999999999999999998764321
Q ss_pred ---------------------------------------------CeEEeCCCCCEeEEEEeeCC----CEEEEeeCCCc
Q psy6446 56 ---------------------------------------------PTVYRGHSSGIKHVQFFKNN----TRLISCAEDKT 86 (134)
Q Consensus 56 ---------------------------------------------~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~ 86 (134)
...+.+|...|.+++|+|++ +++++++.|+.
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 12234688899999999998 79999999999
Q ss_pred EEEEecCCC----------------------------------------------ceeEEEe-cCCCCeEEEEccCCcEE
Q psy6446 87 VRLWDVSAS----------------------------------------------AEVQKLE-FGAVPNSLEISRDGTTI 119 (134)
Q Consensus 87 i~~~d~~~~----------------------------------------------~~~~~~~-~~~~v~~~~~~~~~~~l 119 (134)
|++||++.+ +.+..+. +...|.+++|+|++++|
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence 999999864 2333333 46789999999999988
Q ss_pred EEe-cCCeEEEEeCCC
Q psy6446 120 TVT-HGSCVTFLDANS 134 (134)
Q Consensus 120 ~~~-~~~~i~i~d~~t 134 (134)
+++ .||.|++||+++
T Consensus 322 ~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATY 337 (351)
T ss_dssp EEEETTSCEEEEEECT
T ss_pred EEecCCCcEEEEecCc
Confidence 875 689999999863
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=5.3e-25 Score=134.54 Aligned_cols=130 Identities=20% Similarity=0.282 Sum_probs=116.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++.+..+.+...+.. ++|+|+++.+++++.++.+++||+++... ..+..|...+.+++|+|+++++++
T Consensus 206 ~i~~~d~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~~~~i~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHDFTSQIFS-LGYCPTGEWLAVGMESSNVEVLHVNKPDK--YQLHLHESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEE-EEECTTSSEEEEEETTSCEEEEETTSSCE--EEECCCSSCEEEEEECTTSSEEEE
T ss_pred cEEEEECCCCceEeeecCCCceEE-EEECCCCCEEEEEcCCCcEEEEECCCCCe--EEEcCCccceeEEEECCCCCEEEE
Confidence 378999999999988887766655 99999999999999999999999987543 356789999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.|+.+++||+.+++......+...+.+++|+|++++++++ .||.|++||+.
T Consensus 283 ~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 283 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 999999999999999988888888999999999999988875 78999999974
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=8.1e-26 Score=149.97 Aligned_cols=134 Identities=22% Similarity=0.323 Sum_probs=113.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC--eEEeCCCCCEeEEEEeeCC--C
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP--TVYRGHSSGIKHVQFFKNN--T 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~--~ 76 (134)
+|++||+.+++.+..+.++...+.+++|+|+++.|++++.|+.|++||........ ....+|...|.+++|+|++ .
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 48999999999999998655666669999999999999999999999986532110 1114688899999999976 5
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.+++++.|+.|++||+++++....+. |...|.+++|+|++++++++ .|+.|++||+++
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 79999999999999999988887776 67889999999999999876 689999999864
No 52
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=8e-25 Score=136.33 Aligned_cols=131 Identities=18% Similarity=0.250 Sum_probs=110.7
Q ss_pred CeeEeecCCCceeeEEe-eC--CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC-
Q psy6446 1 MGTVWDAVSGEELHSFQ-HP--HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT- 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 76 (134)
+|++||+.+ +.+..+. +. ...+.+++|+|+++.|++++.|+.|++||++. . ....+.+|...|.+++|+|+++
T Consensus 142 ~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~-~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 142 ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG-H-EIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS-C-EEEEEECSSSCEEEEEECSSCTT
T ss_pred EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC-C-EEEEeccCCCcEEEEEECCCCCC
Confidence 478999985 5555555 22 24466699999999999999999999999953 3 4456789999999999999998
Q ss_pred EEEEeeCCCcEEEEecCC----CceeEEEecCCCCeEEEEcc-CCcEEEEe-cCCeEEEEeCCC
Q psy6446 77 RLISCAEDKTVRLWDVSA----SAEVQKLEFGAVPNSLEISR-DGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~~~~i~i~d~~t 134 (134)
.+++++.|+.|++||+++ +.....+.+...+.+++|+| ++.+++++ .|+.|++||+++
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 899999999999999998 66777777889999999999 99988875 689999999863
No 53
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.4e-25 Score=144.92 Aligned_cols=133 Identities=11% Similarity=0.073 Sum_probs=107.4
Q ss_pred CeeEeecCCCce-----------eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEE
Q psy6446 1 MGTVWDAVSGEE-----------LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHV 69 (134)
Q Consensus 1 ~i~v~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~ 69 (134)
+|++||+.+++. ...+.++...+.+++|+++ ..|++|+.||.|++||++++..+...+.+|...|.++
T Consensus 236 tvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv 314 (524)
T 2j04_B 236 TINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSV 314 (524)
T ss_dssp CEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEE
T ss_pred eEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEE
Confidence 589999986642 2355655566667999986 4899999999999999997655556688999999999
Q ss_pred --EEeeCC-CEEEEeeCCCcEEEEecCCCceeEEEe-cC--CCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 70 --QFFKNN-TRLISCAEDKTVRLWDVSASAEVQKLE-FG--AVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 70 --~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~--~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.|+|++ +.|++++.|++|++||++++++...+. +. ..+.+++|+|++..++++ .|+.|++||+++
T Consensus 315 ~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 315 STAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA 386 (524)
T ss_dssp EEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC
T ss_pred EEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc
Confidence 567787 899999999999999999887766554 22 357899999999888775 679999999864
No 54
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.94 E-value=8.6e-25 Score=139.07 Aligned_cols=131 Identities=18% Similarity=0.223 Sum_probs=117.2
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++++..+..+...+.++.|+|+++.+++|+.||.|++||++++.. ...+.+|...|.+++|+ ++++++
T Consensus 291 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~--~~~l~s 367 (464)
T 3v7d_B 291 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL-MYTLQGHTALVGLLRLS--DKFLVS 367 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEEC--SSEEEE
T ss_pred eEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE-EEEEeCCCCcEEEEEEc--CCEEEE
Confidence 589999999999999986566666699999999999999999999999988654 45678999999999996 689999
Q ss_pred eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
++.|+.|++||+.++.......+...+..++|+|++.+++++.++.|++||+++
T Consensus 368 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 368 AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRS 421 (464)
T ss_dssp EETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETTEEEEEETTT
T ss_pred EeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCCeEEEEECCC
Confidence 999999999999998888888788888999999999999998899999999864
No 55
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=1.8e-25 Score=137.90 Aligned_cols=130 Identities=15% Similarity=0.293 Sum_probs=110.6
Q ss_pred eecCCCceeeEEeeCCCceeeEEEccC---CcEEEEecCCCeEEEEECCC-CCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 5 WDAVSGEELHSFQHPHIVKSSVHFATD---SYRLATGSNDKNIRIYDLNK-PDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 5 ~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~v~i~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
++....+.+..+.++...+.+++|+|+ |++|++++.||.|++||+.+ +......+.+|...|.+++|+|++++|++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 334445556666666666777999998 69999999999999999987 34333567889999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEecCCCCeEEEE--ccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEI--SRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||+.+++......+...+.+++| +|++.+++++ .|+.|++||+++
T Consensus 104 ~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred EcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 99999999999999998888888999999999 8899888775 689999999864
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=4.8e-26 Score=143.09 Aligned_cols=132 Identities=15% Similarity=0.291 Sum_probs=112.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++....+..+ .......|+|++++|++++.|+.|++||+.++.. ...+.+|...|.+++|+|++++|++
T Consensus 79 ~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s 156 (420)
T 3vl1_A 79 HDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQ-REIDQAHVSEITKLKFFPSGEALIS 156 (420)
T ss_dssp EEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEE-EEETTSSSSCEEEEEECTTSSEEEE
T ss_pred cEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcce-eeecccccCccEEEEECCCCCEEEE
Confidence 3789999887776666544 4455478899999999999999999999987543 3455689999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|+.|++||+.+++....+. +...|.+++|+|++.+++++ .|+.|++||+++
T Consensus 157 ~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 157 SSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp EETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred EeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC
Confidence 9999999999999998888777 67889999999999988875 689999999864
No 57
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=1.3e-24 Score=135.68 Aligned_cols=134 Identities=16% Similarity=0.213 Sum_probs=110.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCCCeEE---------------eCCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAEPTVY---------------RGHSS 64 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~---------------~~~~~ 64 (134)
.|++||+.+++.+..+..+...+.+++|+|+++ .+++++.||.|++||+++.......+ ..|..
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG 246 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC
Confidence 478999999999999985556666699999988 58899999999999998765333333 57889
Q ss_pred CEeEEEEeeCCCEEEEeeCCCcEEEEecCCCce-----------------------------------------------
Q psy6446 65 GIKHVQFFKNNTRLISCAEDKTVRLWDVSASAE----------------------------------------------- 97 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~----------------------------------------------- 97 (134)
.|.+++|+|+++++++++.|+.+++||+.+++.
T Consensus 247 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 326 (408)
T 4a11_B 247 KVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ 326 (408)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE
T ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc
Confidence 999999999999999999999999999876432
Q ss_pred eEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 98 VQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 98 ~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+..+. +...|.+++|+|++++|+++ .||.|++||+++
T Consensus 327 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 327 ITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred eeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 22222 45788999999999998876 689999999864
No 58
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=4.4e-25 Score=136.71 Aligned_cols=132 Identities=11% Similarity=0.149 Sum_probs=103.9
Q ss_pred CeeEeecCCCc---------------e-eeEEeeCCCceeeEEEccCCcEEEEecCCCe-EEEEECCCCCCCCeEEe-C-
Q psy6446 1 MGTVWDAVSGE---------------E-LHSFQHPHIVKSSVHFATDSYRLATGSNDKN-IRIYDLNKPDAEPTVYR-G- 61 (134)
Q Consensus 1 ~i~v~d~~~~~---------------~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-v~i~~~~~~~~~~~~~~-~- 61 (134)
+|++||+.+++ + +..+..+...+.+++|+|++++|++++.|+. |++||++++... ..+. +
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~-~~~~~g~ 238 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV-REFRRGL 238 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE-EEEECTT
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE-EEEEcCC
Confidence 48899998765 2 6677766666666999999999999999998 999999987655 4455 5
Q ss_pred CCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeE--------------------EEec----CCCCeEEEEccCCc
Q psy6446 62 HSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQ--------------------KLEF----GAVPNSLEISRDGT 117 (134)
Q Consensus 62 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~--------------------~~~~----~~~v~~~~~~~~~~ 117 (134)
|...|.+++|+|++++|++++.|+.|++||+..+.... .+.. ......++|++++.
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~ 318 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS 318 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC
Confidence 99999999999999999999999999999997653211 1111 12236789999998
Q ss_pred EEEEe-cCCeEEEEeCC
Q psy6446 118 TITVT-HGSCVTFLDAN 133 (134)
Q Consensus 118 ~l~~~-~~~~i~i~d~~ 133 (134)
.++++ .||.+++|++.
T Consensus 319 ~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 319 LVVVWPHTRMIETFKVV 335 (355)
T ss_dssp EEEEETTTTEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEE
Confidence 88876 68999999864
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=3.1e-24 Score=134.61 Aligned_cols=132 Identities=17% Similarity=0.255 Sum_probs=114.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++.+..+..+...+.++.| +++.+++++.||.|++||++........+.+|.+.|.+++|+|+++.+++
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 234 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLAS 234 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEE
Confidence 4899999999999999866666666999 46799999999999999999666666678899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCc-EEEEec---CCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGT-TITVTH---GSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~---~~~i~i~d~~t 134 (134)
++.|+.|++||+++++....+. +...+.+++|+|++. ++++++ |+.|++||+++
T Consensus 235 ~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp EETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT
T ss_pred EeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC
Confidence 9999999999999988887775 678899999999874 555543 89999999864
No 60
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=9.2e-25 Score=146.52 Aligned_cols=132 Identities=19% Similarity=0.296 Sum_probs=114.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++.+..+..+...+.+++|+|++++|++++.||.|++||+.++.. ...+.+|...|.+++|+|+++++++
T Consensus 36 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~ 114 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK-VVDFEAHPDYIRSIAVHPTKPYVLS 114 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECSSSSEEEE
T ss_pred EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE-EEEEecCCCCEEEEEEeCCCCEEEE
Confidence 478999999999999996666666699999999999999999999999998664 3567889999999999999999999
Q ss_pred eeCCCcEEEEecCCC-ceeEEEe-cCCCCeEEEEcc-CCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSAS-AEVQKLE-FGAVPNSLEISR-DGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~-~~~~~~~-~~~~v~~~~~~~-~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.|+.|++||+.++ .....+. +...+.+++|+| ++..++++ .||.|++||++
T Consensus 115 ~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~ 171 (814)
T 3mkq_A 115 GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (814)
T ss_dssp EETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred EcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999887 4445544 578899999999 77777765 68999999985
No 61
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=1.7e-24 Score=150.53 Aligned_cols=132 Identities=21% Similarity=0.292 Sum_probs=117.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee--CCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK--NNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l 78 (134)
+|++||+.+++.+..+..+...+.+++|+|++++|++++.|+.|++||+.++.. ...+.+|...|.+++|+| ++..+
T Consensus 638 ~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l 716 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL-VHTYDEHSEQVNCCHFTNKSNHLLL 716 (1249)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECSSSSCCEE
T ss_pred eEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce-EEEEcCCCCcEEEEEEecCCCceEE
Confidence 589999999999999996666666799999999999999999999999998654 456789999999999999 55688
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++++.|+.|++||+.++++...+. +...|.+++|+|++.+++++ .||.|++||++
T Consensus 717 ~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~ 773 (1249)
T 3sfz_A 717 ATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR 773 (1249)
T ss_dssp EEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGG
T ss_pred EEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCC
Confidence 999999999999999999888776 67889999999999988876 68999999975
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.6e-24 Score=130.38 Aligned_cols=129 Identities=22% Similarity=0.397 Sum_probs=110.3
Q ss_pred CeeEeecCCCceeeEEee-CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQH-PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++|| .++....+.. +...+.+++|+|++. +++++.|+.+++||++++.. ...+.+|...+.+++|+|++ .++
T Consensus 166 ~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~-~l~ 240 (313)
T 3odt_A 166 TIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV-LRTYEGHESFVYCIKLLPNG-DIV 240 (313)
T ss_dssp CEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTS-CEE
T ss_pred CEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh-hhhhhcCCceEEEEEEecCC-CEE
Confidence 478999 4566666763 556666699999988 99999999999999998654 45678899999999999998 589
Q ss_pred EeeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
+++.|+.|++||+.+++....+.. ...+.+++|+|++++++++.||.|++||+++
T Consensus 241 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 241 SCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred EEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence 999999999999999998888874 5689999999999987777899999999863
No 63
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=2e-24 Score=140.33 Aligned_cols=129 Identities=26% Similarity=0.452 Sum_probs=110.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||. +++.+..+..+...+.+++|+|+++.|++++.|+.+++|+... .....+.+|...|.+++|+|++++|++
T Consensus 408 ~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~~las 484 (577)
T 2ymu_A 408 TVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTIAS 484 (577)
T ss_dssp EEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSCEEEE
T ss_pred EEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 3789995 5778888885555666699999999999999999999999753 334567899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.|+.|++||. +++....+. +...|.+++|+|++++|+++ .|+.|++||..
T Consensus 485 ~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 485 ASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp EETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 999999999995 567766665 67889999999999988875 68999999963
No 64
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.5e-24 Score=136.78 Aligned_cols=133 Identities=15% Similarity=0.116 Sum_probs=113.0
Q ss_pred CeeEeecC--CCceeeEEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCC---CeEEeCCCCCEeEEEEee
Q psy6446 1 MGTVWDAV--SGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAE---PTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~ 73 (134)
+|++||+. +++.+..+. .....+.+++|+|++++|++++.+|.+++|++.+.... ...+.+|...|.+++|+|
T Consensus 126 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp 205 (450)
T 2vdu_B 126 SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK 205 (450)
T ss_dssp EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE
T ss_pred eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC
Confidence 47899999 888888875 33344555999999999999999999999999876532 224678999999999999
Q ss_pred C---CCEEEEeeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 74 N---NTRLISCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 74 ~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+ +++|++++.|+.|++||+.+++.+..+. +...|.+++|+ ++.+++++ .|+.|++||+++
T Consensus 206 ~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 206 DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC
Confidence 9 9999999999999999999998877644 67889999999 99988875 689999999864
No 65
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=9.4e-26 Score=142.56 Aligned_cols=132 Identities=15% Similarity=0.227 Sum_probs=109.4
Q ss_pred CeeEeecCCCceeeEEee--CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe-CCCCCEeEEEEee----
Q psy6446 1 MGTVWDAVSGEELHSFQH--PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR-GHSSGIKHVQFFK---- 73 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~---- 73 (134)
+|++||+.+++++..+.. +...+.+++|+|++++|++|+.||.|++||++++... ..+. .|...|.+++|+|
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~s~ 271 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLI-RSWSFGDHAPITHVEVCQFYGK 271 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE-EEEBCTTCEEEEEEEECTTTCT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEE-EEEecCCCCceEEEEeccccCC
Confidence 478999999999999985 5566666999999999999999999999999985543 3343 7778999996664
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeEEEe---------------------------cCCCCeEEEEccCCcEEEEe-cCC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASAEVQKLE---------------------------FGAVPNSLEISRDGTTITVT-HGS 125 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~---------------------------~~~~v~~~~~~~~~~~l~~~-~~~ 125 (134)
+++++++++.|+.|++||++++++...+. +...|.+++|+ ++.+++++ .|+
T Consensus 272 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~ 350 (437)
T 3gre_A 272 NSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATS 350 (437)
T ss_dssp TEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGT
T ss_pred CccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCC
Confidence 57799999999999999999998887776 23347889999 67777776 689
Q ss_pred eEEEEeCCC
Q psy6446 126 CVTFLDANS 134 (134)
Q Consensus 126 ~i~i~d~~t 134 (134)
.|++||+++
T Consensus 351 ~i~~wd~~~ 359 (437)
T 3gre_A 351 SIVMFSLNE 359 (437)
T ss_dssp EEEEEETTC
T ss_pred eEEEEECCC
Confidence 999999864
No 66
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=8.5e-25 Score=145.13 Aligned_cols=133 Identities=18% Similarity=0.273 Sum_probs=112.4
Q ss_pred CeeEeecCCCceeeEEe---eCCCceeeEEEccCC--cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC
Q psy6446 1 MGTVWDAVSGEELHSFQ---HPHIVKSSVHFATDS--YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 75 (134)
+|++||........... .+...+.+++|+|++ ..+++++.|+.|++||+++.. ....+.+|.+.|.+++|+|++
T Consensus 495 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spdg 573 (694)
T 3dm0_A 495 TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDG 573 (694)
T ss_dssp CEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTS
T ss_pred EEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEeCCC
Confidence 58999986543333222 344456669999976 579999999999999998754 345678999999999999999
Q ss_pred CEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
++|++++.|+.|++||+++++.+..+.....+.+++|+|++.+++++.++.|++||+++
T Consensus 574 ~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 574 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLES 632 (694)
T ss_dssp SEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCC
Confidence 99999999999999999999988887778889999999999999998888999999864
No 67
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.5e-25 Score=150.42 Aligned_cols=132 Identities=15% Similarity=0.146 Sum_probs=111.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC----------eEEeCCCCCEeEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP----------TVYRGHSSGIKHVQ 70 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~----------~~~~~~~~~v~~~~ 70 (134)
+|++||+.+++++..+.++..+ .+++|+|+++++++|+.||.|++||+++..... ..+.+|.+.|.+++
T Consensus 80 ~v~lWd~~~~~~~~~~~~~~~V-~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~ 158 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVFVPGKI-TSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158 (902)
T ss_dssp EEEEEETTTCSEEEEEECSSCE-EEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred eEEEEECCCCcEEEEEcCCCCE-EEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence 4899999999999988866554 559999999999999999999999998754210 12357889999999
Q ss_pred EeeC-CCEEEEeeCCCcEEEEecCCCceeEEEecC-------------------CCCeEEEEccCCcEEEEe-cCCeEEE
Q psy6446 71 FFKN-NTRLISCAEDKTVRLWDVSASAEVQKLEFG-------------------AVPNSLEISRDGTTITVT-HGSCVTF 129 (134)
Q Consensus 71 ~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~-~~~~i~i 129 (134)
|+|+ +..+++++.|+.+ +||+++++....+... ..|.+++|+|+|.+|+++ .|+.|++
T Consensus 159 ~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 159 WNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp EETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred EccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 9995 5788999999999 9999999888777533 569999999999999876 6899999
Q ss_pred EeCCC
Q psy6446 130 LDANS 134 (134)
Q Consensus 130 ~d~~t 134 (134)
||+++
T Consensus 238 Wd~~~ 242 (902)
T 2oaj_A 238 WDANS 242 (902)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99863
No 68
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.7e-24 Score=132.61 Aligned_cols=134 Identities=13% Similarity=0.309 Sum_probs=110.5
Q ss_pred CeeEeecCCCc--eeeEEeeCCCceeeEEEccC--CcEEEEecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEee--
Q psy6446 1 MGTVWDAVSGE--ELHSFQHPHIVKSSVHFATD--SYRLATGSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFK-- 73 (134)
Q Consensus 1 ~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~-- 73 (134)
+|++||+.+++ .+..+..+...+.+++|+|+ ++.|++++.|+.|++||++.... ....+..|...|.+++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 48999999887 56666655556666999998 99999999999999999988643 2335678999999999999
Q ss_pred -----------CCCEEEEeeCCCcEEEEecCCCcee----EEEe-cCCCCeEEEEccC---CcEEEEe-cCCeEEEEeCC
Q psy6446 74 -----------NNTRLISCAEDKTVRLWDVSASAEV----QKLE-FGAVPNSLEISRD---GTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 74 -----------~~~~l~~~~~d~~i~~~d~~~~~~~----~~~~-~~~~v~~~~~~~~---~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.+++++.|+.|++||+++++.. ..+. +...+.+++|+|+ +.+++++ .||.|++||++
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 6999999999999999999876543 2232 5678999999999 8888875 68999999986
Q ss_pred C
Q psy6446 134 S 134 (134)
Q Consensus 134 t 134 (134)
+
T Consensus 240 ~ 240 (379)
T 3jrp_A 240 N 240 (379)
T ss_dssp S
T ss_pred C
Confidence 3
No 69
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=1.7e-25 Score=136.59 Aligned_cols=133 Identities=21% Similarity=0.277 Sum_probs=104.9
Q ss_pred CeeEeecCCCc--eeeEEeeCCCceeeEEEccC--CcEEEEecCCCeEEEEECCCCCCC--CeEEeCCCCCEeEEEEeeC
Q psy6446 1 MGTVWDAVSGE--ELHSFQHPHIVKSSVHFATD--SYRLATGSNDKNIRIYDLNKPDAE--PTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 1 ~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~ 74 (134)
+|++||+.+++ .+..+..+...+.+++|+|+ +.+|++++.|+.|++||++..... ...+.+|...+.+++|+|+
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 58999998874 45566645555556999997 789999999999999999865321 2345678899999999997
Q ss_pred -----------------CCEEEEeeCCCcEEEEecCCCc---eeEEEe-cCCCCeEEEEccCC----cEEEEe-cCCeEE
Q psy6446 75 -----------------NTRLISCAEDKTVRLWDVSASA---EVQKLE-FGAVPNSLEISRDG----TTITVT-HGSCVT 128 (134)
Q Consensus 75 -----------------~~~l~~~~~d~~i~~~d~~~~~---~~~~~~-~~~~v~~~~~~~~~----~~l~~~-~~~~i~ 128 (134)
+++|++++.|+.|++||++... +...+. |...|.+++|+|++ .+|+++ .|+.|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 4689999999999999997553 333333 56789999999986 677765 789999
Q ss_pred EEeCC
Q psy6446 129 FLDAN 133 (134)
Q Consensus 129 i~d~~ 133 (134)
+||++
T Consensus 242 iw~~~ 246 (316)
T 3bg1_A 242 IWTCD 246 (316)
T ss_dssp EEECS
T ss_pred EEEcc
Confidence 99975
No 70
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=2e-25 Score=141.30 Aligned_cols=132 Identities=20% Similarity=0.196 Sum_probs=105.2
Q ss_pred CeeEeecCCCceeeEEeeC--CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC-E
Q psy6446 1 MGTVWDAVSGEELHSFQHP--HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT-R 77 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 77 (134)
+|++||++++.......+. ...+.+++|+|++++|++|+.||.|++||++.. ....+.+|...|.+++|+|+++ .
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~~~~~~~h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--ELWNLRMHKKKVTHVALNPCCDWF 265 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--BCCCSBCCSSCEEEEEECTTCSSE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--eeEEEecccceEEeeeecCCCceE
Confidence 5899999865544333322 223455999999999999999999999999753 2345678999999999999876 6
Q ss_pred EEEeeCCCcEEEEecCCCceeEEE----ecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKL----EFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+++++.|+.|++||+++.+....+ .|...|.+++|+|++.+|+++ .|+.|++||+++
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 779999999999999876654333 357789999999999998875 789999999863
No 71
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3e-24 Score=134.61 Aligned_cols=131 Identities=22% Similarity=0.313 Sum_probs=115.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
.|++||+.+++.+..+..+...+.+++|+|+++.|++++.|+.|++||+++... ...+..|...+.+++|+|++ .+++
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~-~l~~ 305 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS-QNCFYGHSQSIVSASWVGDD-KVIS 305 (425)
T ss_dssp CEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC-SEEECCCSSCEEEEEEETTT-EEEE
T ss_pred eEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc-ceEecCCCccEEEEEECCCC-EEEE
Confidence 478999999999888885556666699999999999999999999999988654 45677899999999999999 9999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.|+.|++||+++++....+. +...+.+++|+|++.+++++ .||.|++||++
T Consensus 306 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 306 CSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 9999999999999999888777 47789999999999998876 68999999975
No 72
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=1.2e-24 Score=133.17 Aligned_cols=133 Identities=14% Similarity=0.217 Sum_probs=106.1
Q ss_pred CeeEeecCCC----ceeeEEeeCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCC--------CCeEEeCCCCCE
Q psy6446 1 MGTVWDAVSG----EELHSFQHPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDA--------EPTVYRGHSSGI 66 (134)
Q Consensus 1 ~i~v~d~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~--------~~~~~~~~~~~v 66 (134)
+|++||+.++ +.+..+..+...+.+++|+| ++++|++++.||.|++||++++.. ....+..|...|
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (351)
T 3f3f_A 34 HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSL 113 (351)
T ss_dssp EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCE
T ss_pred eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCce
Confidence 4899999876 35666675666666699999 699999999999999999987542 234567899999
Q ss_pred eEEEEeeC--CCEEEEeeCCCcEEEEecCCCcee----------------------------------------------
Q psy6446 67 KHVQFFKN--NTRLISCAEDKTVRLWDVSASAEV---------------------------------------------- 98 (134)
Q Consensus 67 ~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~---------------------------------------------- 98 (134)
.+++|+|+ ++++++++.|+.|++||+++++..
T Consensus 114 ~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~ 193 (351)
T 3f3f_A 114 YSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQA 193 (351)
T ss_dssp EEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEE
T ss_pred eEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCc
Confidence 99999999 999999999999999998765421
Q ss_pred --------------EEEe-cCCCCeEEEEccCC----cEEEEe-cCCeEEEEeCC
Q psy6446 99 --------------QKLE-FGAVPNSLEISRDG----TTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 99 --------------~~~~-~~~~v~~~~~~~~~----~~l~~~-~~~~i~i~d~~ 133 (134)
..+. +...|.+++|+|++ .+++++ .||.|++||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 194 IIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp EEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred EEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 1111 35678999999998 677765 68999999975
No 73
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=2.3e-24 Score=132.68 Aligned_cols=133 Identities=14% Similarity=0.201 Sum_probs=111.7
Q ss_pred CeeEeecCCCc-eeeEEeeCCCceeeEE------EccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCC----CEeEE
Q psy6446 1 MGTVWDAVSGE-ELHSFQHPHIVKSSVH------FATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSS----GIKHV 69 (134)
Q Consensus 1 ~i~v~d~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~----~v~~~ 69 (134)
+|++||+.+++ ++..+..+...+.++. |+|+++.|++++.|+.|++||++++......+..|.+ .+.++
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 48999999888 7888886556666585 4688999999999999999999987655566666554 78888
Q ss_pred E----EeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEcc---CCcEEEEe-cCCeEEEEeCC
Q psy6446 70 Q----FFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISR---DGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 70 ~----~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~-~~~~i~i~d~~ 133 (134)
. |+|+++++++++.|+.|++||+++++......+...+.+++|+| ++.+++++ .||.|++||++
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 8 67899999999999999999999999887777889999999999 88888875 68999999975
No 74
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=1.7e-24 Score=133.95 Aligned_cols=133 Identities=16% Similarity=0.111 Sum_probs=110.6
Q ss_pred CeeEeecCCCce---eeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCC-----------------CCCCCeEE
Q psy6446 1 MGTVWDAVSGEE---LHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK-----------------PDAEPTVY 59 (134)
Q Consensus 1 ~i~v~d~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~-----------------~~~~~~~~ 59 (134)
+|++||+.+++. ...+. .+...+.+++|+|++++|++++.|+.+++||++. .......+
T Consensus 119 ~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 119 VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 478999988763 33332 3345556699999999999999999999999742 12233455
Q ss_pred eCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 60 RGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 60 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
.+|...+.+++|+|+++++++++.|+.|++||+++++.+..+. +...+.+++|+|++.+++++.|+.|++||++
T Consensus 199 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~ 273 (372)
T 1k8k_C 199 SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYD 273 (372)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEE
T ss_pred CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEcc
Confidence 6889999999999999999999999999999999999888887 4568999999999999999999999999975
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.93 E-value=3.3e-25 Score=144.58 Aligned_cols=132 Identities=14% Similarity=0.150 Sum_probs=109.5
Q ss_pred CeeEeecCCCcee-eEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC-CCCCEeEEEEee-----
Q psy6446 1 MGTVWDAVSGEEL-HSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-HSSGIKHVQFFK----- 73 (134)
Q Consensus 1 ~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~v~~~~~~~----- 73 (134)
+|++||+.+++.. ..+..+...+.+++|+|++++|++++.|+.|++||+.++... ..+.+ |...|.+++|+|
T Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~h~~~v~~~~~sp~~~~~ 546 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK-TSRWAFRTSKINAISWKPAEKGA 546 (615)
T ss_dssp CEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-ECCSCCCSSCEEEEEECCCC---
T ss_pred eEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce-eEeecCCCCceeEEEEcCccccc
Confidence 4789999877665 444444555566999999999999999999999999886543 34455 999999999999
Q ss_pred -----CCCEEEEeeCCCcEEEEecCCC-ceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCCC
Q psy6446 74 -----NNTRLISCAEDKTVRLWDVSAS-AEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANS 134 (134)
Q Consensus 74 -----~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~t 134 (134)
++++|++++.|+.|++||+.++ +....+. +...|.+++|+|+++ |++ +.|+.|++||+++
T Consensus 547 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 547 NEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ---CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred cccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 9999999999999999999987 5665554 578899999999999 766 4789999999864
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.5e-24 Score=135.91 Aligned_cols=131 Identities=13% Similarity=0.139 Sum_probs=113.3
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++.+..+..+...+.++.|+|++ .+++++.|+.+++||++++.. ...+..|...+.+++|+|+++++++
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL-LALSIVDGVPIFAGRISQDGQKYAV 347 (425)
T ss_dssp CEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE-EEEEECTTCCEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE-eEecccCCccEEEEEEcCCCCEEEE
Confidence 48999999999998888555556669999999 999999999999999988653 4567788999999999999999999
Q ss_pred eeCCCcEEEEecCCCc--------------------eeEEEecC--C-CCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASA--------------------EVQKLEFG--A-VPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~--------------------~~~~~~~~--~-~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.|+.|++||+.+++ .+..+... . .+.+++|+|++++|+++ .||.|++||++
T Consensus 348 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 348 AFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 9999999999999877 66666643 3 89999999999988765 78999999986
No 77
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=1.6e-24 Score=133.41 Aligned_cols=133 Identities=15% Similarity=0.179 Sum_probs=108.3
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc---CCcEEEEecCCCeEEEEECCCCCCCCeE----EeCCCCCEeEEEEee
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT---DSYRLATGSNDKNIRIYDLNKPDAEPTV----YRGHSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~----~~~~~~~v~~~~~~~ 73 (134)
+|++||+.+++......+...+.. +.|+| +++.+++++.||.|++||+++....... +.+|...|.+++|+|
T Consensus 191 ~i~i~d~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 269 (357)
T 3i2n_A 191 DIKLFDLRNMALRWETNIKNGVCS-LEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP 269 (357)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEE-EEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEET
T ss_pred eEEEEECccCceeeecCCCCceEE-EEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECC
Confidence 378999999988766656655554 99999 9999999999999999999876544321 238999999999999
Q ss_pred CCC-EEEEeeCCCcEEEEecCCCc-------------------eeEEEe-cCCCCeEEEEccCCcEEE-Ee-cCCeEEEE
Q psy6446 74 NNT-RLISCAEDKTVRLWDVSASA-------------------EVQKLE-FGAVPNSLEISRDGTTIT-VT-HGSCVTFL 130 (134)
Q Consensus 74 ~~~-~l~~~~~d~~i~~~d~~~~~-------------------~~~~~~-~~~~v~~~~~~~~~~~l~-~~-~~~~i~i~ 130 (134)
+++ ++++++.|+.|++||++.+. .+..+. +...|.+++|+|++++++ ++ .|+.|++|
T Consensus 270 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw 349 (357)
T 3i2n_A 270 QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVL 349 (357)
T ss_dssp TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEE
Confidence 998 79999999999999998643 233333 577899999999998877 44 68999999
Q ss_pred eCCC
Q psy6446 131 DANS 134 (134)
Q Consensus 131 d~~t 134 (134)
|+.+
T Consensus 350 ~~~~ 353 (357)
T 3i2n_A 350 IVTK 353 (357)
T ss_dssp EECC
T ss_pred ECCC
Confidence 9864
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=4.9e-24 Score=133.72 Aligned_cols=133 Identities=19% Similarity=0.284 Sum_probs=112.5
Q ss_pred CeeEeecC-CCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC-EE
Q psy6446 1 MGTVWDAV-SGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT-RL 78 (134)
Q Consensus 1 ~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 78 (134)
+|++||+. .+..+..+..+...+.++.|+|+++.|++++.|+.|++||+++... ...+..|...|.+++|+|++. .+
T Consensus 197 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 197 AIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP-KFTKTNHNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE-EEEECCCSSCCCEEEECTTSTTEE
T ss_pred CEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc-cEEecCCcceEEEEEECCCCCCEE
Confidence 37899998 5666777775556666699999999999999999999999998553 345678999999999999765 45
Q ss_pred EEee--CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEE--e-cCCeEEEEeCCC
Q psy6446 79 ISCA--EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV--T-HGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~--~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~-~~~~i~i~d~~t 134 (134)
++++ .|+.|++||+.+++....+.+...+.+++|+|+++++++ + .+|.|++||+++
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 5554 699999999999999999988899999999999998887 4 479999999753
No 79
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.3e-24 Score=138.00 Aligned_cols=132 Identities=10% Similarity=0.050 Sum_probs=104.1
Q ss_pred CeeEeecCCCcee----eEEeeCCCceeeEEEccC------CcEEEEecCCCeEEEEECCCCCC----------CCeEEe
Q psy6446 1 MGTVWDAVSGEEL----HSFQHPHIVKSSVHFATD------SYRLATGSNDKNIRIYDLNKPDA----------EPTVYR 60 (134)
Q Consensus 1 ~i~v~d~~~~~~~----~~~~~~~~~~~~~~~~~~------~~~l~~~~~d~~v~i~~~~~~~~----------~~~~~~ 60 (134)
+|+|||+.+++.. ..+.++...+..++|+|+ +.+|++++.||.|++||+..+.. +...+.
T Consensus 184 tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~ 263 (524)
T 2j04_B 184 CIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS 263 (524)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC
T ss_pred eEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE
Confidence 4789999877642 345555555656999996 57999999999999999986532 123567
Q ss_pred CCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc-eeEEEe-cCCCCeEE--EEccCC-cEEEEe-cCCeEEEEeCC
Q psy6446 61 GHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA-EVQKLE-FGAVPNSL--EISRDG-TTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 61 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~-~~~~v~~~--~~~~~~-~~l~~~-~~~~i~i~d~~ 133 (134)
+|...|.+++|+++ ..|++|+.||+|++||++++. +...+. |...|.++ .|+|++ .+++++ .|++|++||++
T Consensus 264 ~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 264 LADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp CTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred cCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 89999999999986 489999999999999998764 333344 67889999 578887 777765 78999999985
No 80
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=7.3e-24 Score=134.08 Aligned_cols=133 Identities=20% Similarity=0.289 Sum_probs=109.0
Q ss_pred CeeEeecCCC---ceeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSG---EELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
+|++||++++ +++..+..+...+.+++|+|++. .+++|+.||.|++||++........+..|...|.+++|+|+++
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~ 334 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 334 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCT
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCC
Confidence 4789999987 56777775555666699999887 6889999999999999986666677889999999999999885
Q ss_pred -EEEEeeCCCcEEEEecCCC--------------ceeEEEe-cCCCCeEEEEccCCc-EEEEe-cCCeEEEEeCC
Q psy6446 77 -RLISCAEDKTVRLWDVSAS--------------AEVQKLE-FGAVPNSLEISRDGT-TITVT-HGSCVTFLDAN 133 (134)
Q Consensus 77 -~l~~~~~d~~i~~~d~~~~--------------~~~~~~~-~~~~v~~~~~~~~~~-~l~~~-~~~~i~i~d~~ 133 (134)
.+++++.|+.|++||+... +.+.... +...|.+++|+|+++ +++++ .||.|++|++.
T Consensus 335 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 335 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 6889999999999999872 3333332 466799999999998 66654 68999999975
No 81
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=6.3e-25 Score=135.48 Aligned_cols=130 Identities=12% Similarity=0.305 Sum_probs=108.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEE---eCCCCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVY---RGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~ 76 (134)
+|++||+.+++.+..+..+...+.+++|+| +++.|++++.||.|++||++++... ..+ .+|...|.+++|+|+++
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 174 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV-AIFGGVEGHRDEVLSADYDLLGE 174 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE-EEECSTTSCSSCEEEEEECTTSS
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE-EEecccccccCceeEEEECCCCC
Confidence 478999999999999985556666699999 9999999999999999999886543 344 57999999999999999
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEe-----------------------------cCCCCeEEEEccCCcEEEEe-cCCe
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLE-----------------------------FGAVPNSLEISRDGTTITVT-HGSC 126 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~-----------------------------~~~~v~~~~~~~~~~~l~~~-~~~~ 126 (134)
.+++++.|+.|++||+++++....+. +...+.+++|+ +.+++++ .|+.
T Consensus 175 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~ 252 (366)
T 3k26_A 175 KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENA 252 (366)
T ss_dssp EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSE
T ss_pred EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCE
Confidence 99999999999999998765432221 56789999998 5677765 6899
Q ss_pred EEEEeCC
Q psy6446 127 VTFLDAN 133 (134)
Q Consensus 127 i~i~d~~ 133 (134)
|++||++
T Consensus 253 i~~wd~~ 259 (366)
T 3k26_A 253 IVCWKPG 259 (366)
T ss_dssp EEEEEES
T ss_pred EEEEeCC
Confidence 9999975
No 82
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=2.2e-24 Score=134.58 Aligned_cols=132 Identities=19% Similarity=0.312 Sum_probs=111.9
Q ss_pred CeeEeecCC------Cceee-----EEee-------CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC-
Q psy6446 1 MGTVWDAVS------GEELH-----SFQH-------PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG- 61 (134)
Q Consensus 1 ~i~v~d~~~------~~~~~-----~~~~-------~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~- 61 (134)
+|++||+.+ ++.+. .+.. +...+.+++|+|++ .+++++.|+.|++||+++... ...+..
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~~ 226 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP-LYNFESQ 226 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE-EEEEECC
T ss_pred cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce-eEEEecc
Confidence 478999988 67666 6643 44455559999999 999999999999999988553 355677
Q ss_pred --C---CCCEeEEEEeeCCCEEEEeeCC---CcEEEEecCCCceeEEEe--------------cCCCCeEEEEccCCcEE
Q psy6446 62 --H---SSGIKHVQFFKNNTRLISCAED---KTVRLWDVSASAEVQKLE--------------FGAVPNSLEISRDGTTI 119 (134)
Q Consensus 62 --~---~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l 119 (134)
| ...+.+++|+|++++|++++.| +.|++||+++++.+..+. +...+.+++|+|+++++
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 306 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE
Confidence 8 8999999999999999999999 999999999999888776 56789999999999998
Q ss_pred EEe-cCCeEEEEeCCC
Q psy6446 120 TVT-HGSCVTFLDANS 134 (134)
Q Consensus 120 ~~~-~~~~i~i~d~~t 134 (134)
+++ .|+.|++||+++
T Consensus 307 ~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKT 322 (397)
T ss_dssp EEEETTSEEEEEETTT
T ss_pred EEEeCCCeEEEEEcCC
Confidence 876 689999999864
No 83
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=7.7e-24 Score=131.89 Aligned_cols=130 Identities=14% Similarity=0.105 Sum_probs=107.6
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeC---CCCCEeEEEEeeC
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRG---HSSGIKHVQFFKN 74 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~---~~~~v~~~~~~~~ 74 (134)
+|++||+.+++....+. ++...+.+++|+| +++.|++++.|+.|++||+.. . ....+.. |...|.+++|+|+
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~-~~~~~~~~~~~~~~v~~~~~~~~ 174 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-S-VIQVFAKTDSWDYWYCCVDVSVS 174 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-C-EEEEEECCCCSSCCEEEEEEETT
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-C-ceEEEeccCCCCCCeEEEEECCC
Confidence 58999999888887776 3555666699999 789999999999999999985 2 2233433 3478999999999
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCc-EEEEe-cCCeEEEEeCC
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGT-TITVT-HGSCVTFLDAN 133 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~-~~~~i~i~d~~ 133 (134)
++.+++++.|+.|++||++ ++....+. +...+.+++|+|+++ +++++ .|+.|++||++
T Consensus 175 ~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 175 RQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp TTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred CCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 9999999999999999994 56666665 678899999999998 77765 68999999986
No 84
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=7e-25 Score=138.64 Aligned_cols=116 Identities=19% Similarity=0.211 Sum_probs=95.0
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe-------EEeCCCCCEeEEEEeeCC-CEEEEeeCCCcEEE
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT-------VYRGHSSGIKHVQFFKNN-TRLISCAEDKTVRL 89 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~ 89 (134)
.+...+.+++|+|+++.|++| .|+.|++||++....... .+.+|...|.+++|+|++ +.+++++.|+.|++
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 344455559999999999999 799999999984332222 245789999999999998 99999999999999
Q ss_pred EecCCCce----eEEEecC-C------------CCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 90 WDVSASAE----VQKLEFG-A------------VPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 90 ~d~~~~~~----~~~~~~~-~------------~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
||+++++. ...+... . .+.+++|+|++++++++.++.|++||+++
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~ 315 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNM 315 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTC
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCC
Confidence 99998876 5666543 2 89999999999999987559999999863
No 85
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=5.4e-24 Score=131.31 Aligned_cols=95 Identities=22% Similarity=0.372 Sum_probs=79.8
Q ss_pred CeeEeecCC-Ccee-eEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEE--eeCCC
Q psy6446 1 MGTVWDAVS-GEEL-HSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQF--FKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~ 76 (134)
+|++||+.+ ++.+ ..+..+...+.+++|+|++++|++++.||.|++||+.++... ....|...|.+++| +|+++
T Consensus 65 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~--~~~~~~~~v~~~~~~~~~~~~ 142 (368)
T 3mmy_A 65 DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI--QIAQHDAPVKTIHWIKAPNYS 142 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEECSSCEEEEEEEECSSCE
T ss_pred cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce--eeccccCceEEEEEEeCCCCC
Confidence 478999997 5555 566655666666999999999999999999999999886532 35679999999999 78899
Q ss_pred EEEEeeCCCcEEEEecCCCce
Q psy6446 77 RLISCAEDKTVRLWDVSASAE 97 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~ 97 (134)
.+++++.|+.|++||+++++.
T Consensus 143 ~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 143 CVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp EEEEEETTSEEEEECSSCSSC
T ss_pred EEEEccCCCcEEEEECCCCcE
Confidence 999999999999999987653
No 86
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.2e-25 Score=138.06 Aligned_cols=133 Identities=14% Similarity=0.260 Sum_probs=108.5
Q ss_pred CeeEeecCCCc---eeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCC---CCCCCeEEeCCCCCEeEEEEeeC
Q psy6446 1 MGTVWDAVSGE---ELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK---PDAEPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 1 ~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~ 74 (134)
+|++||+.+++ ++..+.+...+ .+++|+|++++|++++.||.|++|++.. +......+.+|...|.+++|+|+
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 124 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQVDSKF-NDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK 124 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCCCSSCE-EEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS
T ss_pred eEEEEEccCCCCCcEEEEEecCCce-EEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC
Confidence 47999999876 45555555554 4599999999999999999999999987 22344567789999999999998
Q ss_pred -CCEEEEeeCCCcEEEEecCCCc------eeEEE----ecCCCCeEEEEccC-CcEEEEe-cCCeEEEEeCCC
Q psy6446 75 -NTRLISCAEDKTVRLWDVSASA------EVQKL----EFGAVPNSLEISRD-GTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 75 -~~~l~~~~~d~~i~~~d~~~~~------~~~~~----~~~~~v~~~~~~~~-~~~l~~~-~~~~i~i~d~~t 134 (134)
++++++++.|+.|++||+.+++ ....+ .+...+.+++|+|+ +.+++++ .|+.|++||+++
T Consensus 125 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 197 (416)
T 2pm9_A 125 QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA 197 (416)
T ss_dssp STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT
T ss_pred CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC
Confidence 8999999999999999999876 33332 35678999999999 6777775 689999999864
No 87
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8.7e-25 Score=148.54 Aligned_cols=131 Identities=14% Similarity=0.147 Sum_probs=104.2
Q ss_pred CeeEeecCCCcee--eEEe---------eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC---------------
Q psy6446 1 MGTVWDAVSGEEL--HSFQ---------HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA--------------- 54 (134)
Q Consensus 1 ~i~v~d~~~~~~~--~~~~---------~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~--------------- 54 (134)
+|++||+.++... ..+. .+...+.+++|+|+++.|++|+.||.|++|++.+++.
T Consensus 458 tVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~ 537 (902)
T 2oaj_A 458 SVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMN 537 (902)
T ss_dssp EEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------
T ss_pred cEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCccccee
Confidence 5899999887532 1121 3344566699999999999999999999999876521
Q ss_pred -----------------------------CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEE----
Q psy6446 55 -----------------------------EPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKL---- 101 (134)
Q Consensus 55 -----------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~---- 101 (134)
+...+.+|.+.|++++|+|+| +|++++.|++|++||++++..+...
T Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~ 616 (902)
T 2oaj_A 538 FRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIRE 616 (902)
T ss_dssp CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG
T ss_pred eeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhH
Confidence 134567899999999999999 9999999999999999877665421
Q ss_pred ---ecCCCCeEEEEc-----cCC---cEEEEe-cCCeEEEEeC
Q psy6446 102 ---EFGAVPNSLEIS-----RDG---TTITVT-HGSCVTFLDA 132 (134)
Q Consensus 102 ---~~~~~v~~~~~~-----~~~---~~l~~~-~~~~i~i~d~ 132 (134)
.|...|.+++|+ ||| ++|+++ .|++|++||+
T Consensus 617 ~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 617 ISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp TCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred hccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 245669999999 886 677775 7899999997
No 88
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=5.9e-24 Score=131.56 Aligned_cols=133 Identities=16% Similarity=0.194 Sum_probs=109.1
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC---CCeEEeCCCCCEeEEEEeeCC
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA---EPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~ 75 (134)
+|++||+.+++....+. .+...+.++.|+|++++|++++.|+.+++||++.... .......|...|.+++|+|++
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred eEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence 48999999887655543 3445555699999999999999999999999987653 222335688999999999999
Q ss_pred CEEEEeeCCCcEEEEecC------------------CCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 76 TRLISCAEDKTVRLWDVS------------------ASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~------------------~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++++++.|+.+++||++ .++....+. +...+.+++|+|++.+++++ .|+.|++||++
T Consensus 155 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 155 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 999999999999999954 556666664 56789999999999888875 68999999985
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=6.5e-25 Score=139.01 Aligned_cols=133 Identities=7% Similarity=0.003 Sum_probs=101.5
Q ss_pred CeeEeecCCCceeeEE--eeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeC--CCCCEeEEEEeeCC
Q psy6446 1 MGTVWDAVSGEELHSF--QHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRG--HSSGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~ 75 (134)
+|+|||+.+++....+ .++...+.+++|+| ++++|++++.||.|++||+++.. ....... +...+.+++|+|++
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTINIWFCSLDVSASS 221 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCSCCCCCEEEETTT
T ss_pred EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCCccEEEEEECCCC
Confidence 5899999877654444 34555566699998 78999999999999999997643 2222222 33457899999999
Q ss_pred CEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCc-EEEEe-cCCeEEEEeCCC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGT-TITVT-HGSCVTFLDANS 134 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~~~~i~i~d~~t 134 (134)
+++++++.|+.|++||++.........+...|.+++|+|++. +++++ .|+.|++||+++
T Consensus 222 ~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp TEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred CEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 999999999999999987543322223678899999999986 55554 689999999863
No 90
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.6e-23 Score=128.29 Aligned_cols=131 Identities=15% Similarity=0.162 Sum_probs=113.3
Q ss_pred CeeEeecCC-CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVS-GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||+.+ ++.+..+..+...+.+++|+|++++|++++.|+.|++||+++.... ..+. +...+..++|+|++++++
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~ 275 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL-KKYE-TDCPLNTAVITPLKEFII 275 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-EEEE-CSSCEEEEEECSSSSEEE
T ss_pred EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCcee-eeec-CCCCceeEEecCCCceEE
Confidence 378999998 7788888855555666999999999999999999999999986543 3333 778999999999999999
Q ss_pred EeeCCC--------------cEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAEDK--------------TVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~--------------~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.++ .+++||..+++....+. +...|.+++|+|++++++++ .||.|++||++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 276 LGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp EEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred EeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 999888 89999999999888877 67889999999999998876 68999999985
No 91
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.5e-24 Score=132.68 Aligned_cols=133 Identities=14% Similarity=0.132 Sum_probs=109.4
Q ss_pred CeeEeecC--CCceeeEEeeCCCceeeEEEccC--CcEEEEecCCCeEEEEECCCCC-CCCeEEeCCCCCEeEEEEeeC-
Q psy6446 1 MGTVWDAV--SGEELHSFQHPHIVKSSVHFATD--SYRLATGSNDKNIRIYDLNKPD-AEPTVYRGHSSGIKHVQFFKN- 74 (134)
Q Consensus 1 ~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~~v~~~~~~~~- 74 (134)
+|++||+. +++.+..+..+...+.+++|+++ +++|++++.||.|++||+.++. .....+..|...|.+++|+|+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 113 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHE 113 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCC
Confidence 58999998 55667777755666666999976 9999999999999999998764 133456779999999999998
Q ss_pred -CCEEEEeeCCCcEEEEecCCCceeE--E-EecCCCCeEEEEcc-------------CCcEEEEe-cCCeEEEEeCC
Q psy6446 75 -NTRLISCAEDKTVRLWDVSASAEVQ--K-LEFGAVPNSLEISR-------------DGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 75 -~~~l~~~~~d~~i~~~d~~~~~~~~--~-~~~~~~v~~~~~~~-------------~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.+++++.|+.|++||+.++.... . ..+...+.+++|+| ++.+++++ .|+.|++||++
T Consensus 114 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 190 (379)
T 3jrp_A 114 YGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 190 (379)
T ss_dssp GCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred CCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence 9999999999999999998874332 2 23678899999999 58888775 68999999975
No 92
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=1.7e-23 Score=132.37 Aligned_cols=134 Identities=16% Similarity=0.281 Sum_probs=109.4
Q ss_pred CeeEeecCC----------CceeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCC------CeEEeCCC
Q psy6446 1 MGTVWDAVS----------GEELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAE------PTVYRGHS 63 (134)
Q Consensus 1 ~i~v~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~------~~~~~~~~ 63 (134)
+|++||+.+ .+++..+.++...+.+++|+|++. +|++|+.||.|++|++...... ...+.+|.
T Consensus 152 ~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~ 231 (430)
T 2xyi_A 152 DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHT 231 (430)
T ss_dssp CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCS
T ss_pred cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCC
Confidence 488999976 567777775555555699999888 9999999999999999874321 34567899
Q ss_pred CCEeEEEEee-CCCEEEEeeCCCcEEEEecCCC---ceeEEEe-cCCCCeEEEEccCCc-EEEEe-cCCeEEEEeCCC
Q psy6446 64 SGIKHVQFFK-NNTRLISCAEDKTVRLWDVSAS---AEVQKLE-FGAVPNSLEISRDGT-TITVT-HGSCVTFLDANS 134 (134)
Q Consensus 64 ~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~---~~~~~~~-~~~~v~~~~~~~~~~-~l~~~-~~~~i~i~d~~t 134 (134)
..|.+++|+| ++..+++++.|+.|++||++++ +....+. +...+.+++|+|++. +++++ .||.|++||+++
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 9999999999 6788999999999999999976 4555553 678899999999987 56555 689999999863
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=3.4e-24 Score=135.51 Aligned_cols=133 Identities=13% Similarity=0.241 Sum_probs=104.9
Q ss_pred CeeEeecCC-CceeeEE-------eeCCCceeeEEEccCC-cEEEEecCCCeEEEEECCCCCCC---CeEEeCCCC----
Q psy6446 1 MGTVWDAVS-GEELHSF-------QHPHIVKSSVHFATDS-YRLATGSNDKNIRIYDLNKPDAE---PTVYRGHSS---- 64 (134)
Q Consensus 1 ~i~v~d~~~-~~~~~~~-------~~~~~~~~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~---~~~~~~~~~---- 64 (134)
+|++||+.+ ++.+..+ ..+...+.+++|+|++ +.|++++.||.|++||++++... ...+.+|..
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 278 (447)
T 3dw8_B 199 RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNR 278 (447)
T ss_dssp EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----C
T ss_pred eEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcccc
Confidence 478999984 4445433 3444556669999998 99999999999999999986541 456777775
Q ss_pred --------CEeEEEEeeCCCEEEEeeCCCcEEEEecCC-CceeEEEecCCC----------------CeEEEEccCCcEE
Q psy6446 65 --------GIKHVQFFKNNTRLISCAEDKTVRLWDVSA-SAEVQKLEFGAV----------------PNSLEISRDGTTI 119 (134)
Q Consensus 65 --------~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~~~~~~~~~~----------------v~~~~~~~~~~~l 119 (134)
.|.+++|+|++++|++++. +.|++||+++ ++++..+..... +..++|+|++.+|
T Consensus 279 ~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l 357 (447)
T 3dw8_B 279 SFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV 357 (447)
T ss_dssp CHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE
T ss_pred ccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEE
Confidence 8999999999999999999 9999999997 777777764332 2349999999998
Q ss_pred EEe-cCCeEEEEeCCC
Q psy6446 120 TVT-HGSCVTFLDANS 134 (134)
Q Consensus 120 ~~~-~~~~i~i~d~~t 134 (134)
+++ .||.|++||+++
T Consensus 358 ~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 358 MTGSYNNFFRMFDRNT 373 (447)
T ss_dssp EEECSTTEEEEEETTT
T ss_pred EEeccCCEEEEEEcCC
Confidence 876 689999999864
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=1.8e-24 Score=132.05 Aligned_cols=117 Identities=19% Similarity=0.303 Sum_probs=94.9
Q ss_pred eeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEee--CCCEEEEeeCCCcEEEEecC
Q psy6446 17 QHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFK--NNTRLISCAEDKTVRLWDVS 93 (134)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~ 93 (134)
.++...+.+++|+|++++|++|+.|+.|++||+.++.. ....+.+|.+.|.+++|+| +++.|++++.|+.|++||++
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 34555566699999999999999999999999987532 3356789999999999986 48999999999999999998
Q ss_pred CCc--eeEEEe-cCCCCeEEEEccC--CcEEEEe-cCCeEEEEeCC
Q psy6446 94 ASA--EVQKLE-FGAVPNSLEISRD--GTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 94 ~~~--~~~~~~-~~~~v~~~~~~~~--~~~l~~~-~~~~i~i~d~~ 133 (134)
+++ ....+. +...|.+++|+|+ +.+++++ .|+.|++||++
T Consensus 90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~ 135 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYT 135 (316)
T ss_dssp SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEEC
T ss_pred CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecC
Confidence 874 334443 6788999999998 6777776 68999999975
No 95
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=2.9e-23 Score=132.04 Aligned_cols=132 Identities=20% Similarity=0.294 Sum_probs=112.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEc--cCCcEEEEecCCCeEEEEECCCCCCC----------------------C
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFA--TDSYRLATGSNDKNIRIYDLNKPDAE----------------------P 56 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~d~~v~i~~~~~~~~~----------------------~ 56 (134)
+|++||+.+++++..+.++...+.+++|+ ++++.+++++.|+.+++||+.+.... .
T Consensus 184 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 263 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEE
T ss_pred CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEE
Confidence 58999999999999998666666669998 47799999999999999999875432 2
Q ss_pred eEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 57 TVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 57 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
..+.+|...+.++ +++++.+++++.|+.|++||+++++.+..+. +...+.+++|+|++.+++++ .|+.|++||+++
T Consensus 264 ~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 264 GVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp EEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred EEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 3456788888776 6789999999999999999999999888876 57889999999999988876 689999999864
No 96
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.92 E-value=2.9e-23 Score=127.14 Aligned_cols=133 Identities=18% Similarity=0.254 Sum_probs=111.9
Q ss_pred CeeEeecCCCceeeE-EeeCCCceeeEEEccCC--cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 1 MGTVWDAVSGEELHS-FQHPHIVKSSVHFATDS--YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
.+++||......... ...+...+.+++|++++ ..+++++.|+.|++||+++... ...+.+|.+.|.+++|+|++++
T Consensus 151 ~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~-~~~~~~h~~~v~~~~~s~~~~~ 229 (340)
T 4aow_A 151 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL-KTNHIGHTGYLNTVTVSPDGSL 229 (340)
T ss_dssp CEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSSE
T ss_pred eEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce-eeEecCCCCcEEEEEECCCCCE
Confidence 368999876554333 23444555558998754 5688999999999999998654 4567899999999999999999
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
|++++.|+.|++||+++.+++..+.....+.++.|+|++.+++++.|+.|++||+++
T Consensus 230 l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 230 CASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEG 286 (340)
T ss_dssp EEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred EEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCC
Confidence 999999999999999999999999888899999999999998888999999999863
No 97
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.2e-23 Score=128.59 Aligned_cols=119 Identities=14% Similarity=0.181 Sum_probs=106.0
Q ss_pred eEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecC
Q psy6446 14 HSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVS 93 (134)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 93 (134)
..+.++...+.+++|+|++++|++++.||.|++||+.++.. ...+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER-LGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh-hhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 34566666666799999999999999999999999988654 45678899999999999999999999999999999999
Q ss_pred CCceeEEEecCCCCeEEEEccCCcEEEEe-cC-----CeEEEEeCC
Q psy6446 94 ASAEVQKLEFGAVPNSLEISRDGTTITVT-HG-----SCVTFLDAN 133 (134)
Q Consensus 94 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~-----~~i~i~d~~ 133 (134)
+++....+.+...+.+++|+|++.+++++ .+ +.|.+||++
T Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 105 NGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp TCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred CCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 99999999989999999999999988875 56 899999974
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=8.9e-25 Score=140.68 Aligned_cols=125 Identities=12% Similarity=0.086 Sum_probs=96.8
Q ss_pred eEeecCCCce--eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCC-----CEeEEEEeeCC
Q psy6446 3 TVWDAVSGEE--LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSS-----GIKHVQFFKNN 75 (134)
Q Consensus 3 ~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~ 75 (134)
..|++.+++. +..+.+ ...+.+++|+|+|+.|++++.||.+++||... ....+. |.. .+.+++|+|||
T Consensus 67 ~~~~~~~~~~~~~~~~~~-~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG 141 (588)
T 2j04_A 67 NKLDFELAQQNGLLNSQP-VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIE 141 (588)
T ss_dssp CTTTTSCCCSSCSSTTSC-SCCEEEEEECSSSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSS
T ss_pred ceEEEEeCCCceEeecCC-CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCC
Confidence 4455554443 333345 45555599999999999999999999999544 333344 554 59999999999
Q ss_pred CEEEEeeCCCcEEEEecCCCce-------eEEEe-----cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAE-------VQKLE-----FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~-------~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
++|++++.||+|++||+.++.. +..+. |...|.+++|+|+| +++++.|+.|++||+.
T Consensus 142 ~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~ 210 (588)
T 2j04_A 142 SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVS 210 (588)
T ss_dssp SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCC
T ss_pred CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECC
Confidence 9999999999999999998753 45543 24589999999999 6666789999999985
No 99
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.3e-23 Score=135.30 Aligned_cols=128 Identities=14% Similarity=0.221 Sum_probs=101.6
Q ss_pred CeeEeecCCCceeeEEeeCC----CceeeEEEccCCcEEEEecCCCeEEEEECCCCCC------CCeEE----eCCCCCE
Q psy6446 1 MGTVWDAVSGEELHSFQHPH----IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA------EPTVY----RGHSSGI 66 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~------~~~~~----~~~~~~v 66 (134)
+|++||.++ ++..+.+.. ..+.+++|+|+|++|++|+.||.|++||+..+.. ....+ .+|...|
T Consensus 108 ~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V 185 (588)
T 2j04_A 108 NVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWV 185 (588)
T ss_dssp CEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCE
T ss_pred cEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccE
Confidence 478999543 556666332 1366699999999999999999999999988642 12344 5677899
Q ss_pred eEEEEeeCCCEEEEeeCCCcEEEEecCCCcee---EEEe--cCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 67 KHVQFFKNNTRLISCAEDKTVRLWDVSASAEV---QKLE--FGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 67 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---~~~~--~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
.+++|+|++ +++++.|+.+++||+.++... ..+. +...|.+++|+ +..++++.+++|++||+.+
T Consensus 186 ~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~ 254 (588)
T 2j04_A 186 THIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKN 254 (588)
T ss_dssp EEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTT
T ss_pred EEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCC
Confidence 999999999 889999999999999887742 3453 45789999999 6888887789999999863
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=1.2e-23 Score=141.20 Aligned_cols=134 Identities=17% Similarity=0.242 Sum_probs=117.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 79 (134)
+|++||+.+++.+..+..+...+.+++|+|+++.|++++.||.|++|++.++......+.+|...|.+++|+| +++.++
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEE
Confidence 4789999999999999855566666999999999999999999999999886555567789999999999999 889999
Q ss_pred EeeCCCcEEEEecCCCceeEEEec--CCCCeEEEEcc--CCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEF--GAVPNSLEISR--DGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~--~~~~l~~~-~~~~i~i~d~~t 134 (134)
+++.|+.|++||+.+++....+.. ...+.+++|+| ++.+++++ .+|.|++||+++
T Consensus 158 ~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 217 (814)
T 3mkq_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (814)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT
T ss_pred EEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 999999999999988887776663 37899999999 88888876 679999999763
No 101
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=4.2e-24 Score=133.88 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=102.1
Q ss_pred CeeEeecCCCceeeE-----EeeCCCceeeEEEcc--------CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEe
Q psy6446 1 MGTVWDAVSGEELHS-----FQHPHIVKSSVHFAT--------DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIK 67 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~-----~~~~~~~~~~~~~~~--------~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~ 67 (134)
+|++||..+++.... +.++...+.+++|+| ++++|++++.|+.|++||+.+..+. .....|...+.
T Consensus 112 ~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~-~~~~~~~~~v~ 190 (393)
T 4gq1_A 112 TVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI-LAGYPLSSPGI 190 (393)
T ss_dssp CEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE-EEEEECSSCEE
T ss_pred cEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee-eeecCCCCCcE
Confidence 689999998876432 345556666699998 7899999999999999999875544 34567889999
Q ss_pred EEEEeeCC-CEEEEeeCCCcEEEEecCCCceeEEEe--------------------------cCCCCeEEEEc-cCCcEE
Q psy6446 68 HVQFFKNN-TRLISCAEDKTVRLWDVSASAEVQKLE--------------------------FGAVPNSLEIS-RDGTTI 119 (134)
Q Consensus 68 ~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~--------------------------~~~~v~~~~~~-~~~~~l 119 (134)
+++|+|++ ..|++++.|+.|++||+++++...... +...+.++.|+ |++..+
T Consensus 191 ~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l 270 (393)
T 4gq1_A 191 SVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGI 270 (393)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEE
T ss_pred EEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEE
Confidence 99999977 479999999999999998876433221 23467788886 788888
Q ss_pred EEe-cCCeEEEEeCC
Q psy6446 120 TVT-HGSCVTFLDAN 133 (134)
Q Consensus 120 ~~~-~~~~i~i~d~~ 133 (134)
+++ .|+.+++||+.
T Consensus 271 ~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 271 LAMCKSGAWLRWNLF 285 (393)
T ss_dssp EEECTTSEEEEEEC-
T ss_pred EEEeCCCCEEEEECc
Confidence 876 68999999985
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=5.9e-23 Score=129.54 Aligned_cols=130 Identities=21% Similarity=0.314 Sum_probs=109.6
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+|+|||..+++++..++ .+...+.+++|+|+|++|++|+.||.|++||+.+++. ...+.+|...+.++++ ++..+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~-~~~~~~h~~~v~~~s~--~~~~l 202 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR-LRNMTSHSARVGSLSW--NSYIL 202 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEE--ETTEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE-EEEEeCCCCceEEEee--CCCEE
Confidence 58999999999988776 3445567799999999999999999999999998654 4567899999988776 57899
Q ss_pred EEeeCCCcEEEEecCCCce-eEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASAE-VQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++++.|+.+.+||...... ...+. +...+..+.++|++.+++++ .|+.+++||..
T Consensus 203 ~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 203 SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 9999999999999886543 34443 57889999999999998875 78999999975
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.3e-23 Score=137.39 Aligned_cols=134 Identities=13% Similarity=0.305 Sum_probs=110.9
Q ss_pred CeeEeecCCCc--eeeEEeeCCCceeeEEEccC--CcEEEEecCCCeEEEEECCCCC-CCCeEEeCCCCCEeEEEEee--
Q psy6446 1 MGTVWDAVSGE--ELHSFQHPHIVKSSVHFATD--SYRLATGSNDKNIRIYDLNKPD-AEPTVYRGHSSGIKHVQFFK-- 73 (134)
Q Consensus 1 ~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~~v~~~~~~~-- 73 (134)
+|++||+.+++ .+..+..+...+.+++|+|+ ++.+++|+.||.|++||++... .....+.+|...|.+++|+|
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 58999999887 56666655566666999998 9999999999999999998763 23445678999999999999
Q ss_pred -----------CCCEEEEeeCCCcEEEEecCCCce----eEEEe-cCCCCeEEEEccC---CcEEEEe-cCCeEEEEeCC
Q psy6446 74 -----------NNTRLISCAEDKTVRLWDVSASAE----VQKLE-FGAVPNSLEISRD---GTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 74 -----------~~~~l~~~~~d~~i~~~d~~~~~~----~~~~~-~~~~v~~~~~~~~---~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.+++++.||.|++||++++.. ...+. +...|.+++|+|+ +.+++++ .||.|++||++
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 589999999999999999987743 33333 5788999999999 8888875 68999999986
Q ss_pred C
Q psy6446 134 S 134 (134)
Q Consensus 134 t 134 (134)
+
T Consensus 238 ~ 238 (753)
T 3jro_A 238 N 238 (753)
T ss_dssp S
T ss_pred C
Confidence 3
No 104
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.91 E-value=2.3e-22 Score=122.18 Aligned_cols=131 Identities=20% Similarity=0.281 Sum_probs=108.3
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+|+|||+.+++++..++ ++...+.+++|+|++++|++|+.|+.|++|++.+++. ...+.+|...+.++. +++..+
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~-~~~~~~h~~~~~~~~--~~~~~l 122 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR-LRNMTSHSARVGSLS--WNSYIL 122 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSCEEEEE--EETTEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee-EEEecCccceEEEee--cCCCEE
Confidence 58999999999998886 3455566799999999999999999999999998664 456788888776654 567899
Q ss_pred EEeeCCCcEEEEecCCCcee-EEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEV-QKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++++.++.+.+|+....... ..+. +...+..+.+++++.+++++ .|+.|++||+++
T Consensus 123 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 123 SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 99999999999998876443 3333 57788999999999988876 789999999863
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=2e-23 Score=130.34 Aligned_cols=133 Identities=18% Similarity=0.252 Sum_probs=112.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEE------------eCCCCCEeE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVY------------RGHSSGIKH 68 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~------------~~~~~~v~~ 68 (134)
+++|++..++....+..+...+.+++|+| ++++|++++.||.|++||+.+........ .+|...|.+
T Consensus 25 ~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 104 (408)
T 4a11_B 25 RRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVET 104 (408)
T ss_dssp HHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEE
T ss_pred ceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEE
Confidence 56788887888877886666666799999 99999999999999999999866543322 258999999
Q ss_pred EEEee-CCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCC---cEEEEe-cCCeEEEEeCCC
Q psy6446 69 VQFFK-NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDG---TTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 69 ~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~-~~~~i~i~d~~t 134 (134)
++|+| +++.+++++.|+.|++||+.+++....+.....+.++.++|.+ .+++++ .++.|.+||+++
T Consensus 105 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 105 VQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp EEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred EEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 99999 7789999999999999999999999999888899999999855 377765 789999999863
No 106
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.5e-23 Score=131.08 Aligned_cols=130 Identities=15% Similarity=0.171 Sum_probs=109.3
Q ss_pred eeEeecCCCceee----EEeeCCCceeeEEEccC---CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELH----SFQHPHIVKSSVHFATD---SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 74 (134)
|++|++.+++... .+.++...+.+++|+|+ +++|++++.|+.|++||+.++......+.+|...|.+++|+ +
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d 251 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-K 251 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-S
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-C
Confidence 6788888776543 55655556666999999 99999999999999999988765544456899999999999 9
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEec--------------------------CCCCeEEEEccCCcEEEEe--cCCe
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLEF--------------------------GAVPNSLEISRDGTTITVT--HGSC 126 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~--------------------------~~~v~~~~~~~~~~~l~~~--~~~~ 126 (134)
+++|++++.|+.|++||+.+++.+..+.. ...+.+++|+|++++++++ .++.
T Consensus 252 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 252 DYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKC 331 (450)
T ss_dssp TTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCe
Confidence 99999999999999999999998877752 2457899999999988875 5799
Q ss_pred EEEEeC
Q psy6446 127 VTFLDA 132 (134)
Q Consensus 127 i~i~d~ 132 (134)
|++||+
T Consensus 332 i~iw~~ 337 (450)
T 2vdu_B 332 IIILEM 337 (450)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999998
No 107
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.1e-22 Score=122.06 Aligned_cols=128 Identities=17% Similarity=0.378 Sum_probs=107.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeC-CCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-HSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 78 (134)
+|++|| .++.+..+..+...+.++.|.| +++.+++++.|+.+++||... ....+.. |...+.+++|+|++. +
T Consensus 125 ~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~i~~~~~~~~~~-~ 198 (313)
T 3odt_A 125 TAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK---VIKTFSGIHNDVVRHLAVVDDGH-F 198 (313)
T ss_dssp EEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE---EEEEECSSCSSCEEEEEEEETTE-E
T ss_pred CEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc---eEEEEeccCcccEEEEEEcCCCe-E
Confidence 378999 6777878875555555588888 999999999999999999432 2334555 889999999999988 9
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
++++.|+.|++||+++++....+. +...+.+++|+|++.+++++.|+.|++||+++
T Consensus 199 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 199 ISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTT
T ss_pred EEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCC
Confidence 999999999999999999888887 67889999999999766667899999999864
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.91 E-value=1.3e-23 Score=128.86 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=107.0
Q ss_pred CeeEeecCCCc---eeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEEC-CCCCCCCeEEeC--CCCCEeEEEEee
Q psy6446 1 MGTVWDAVSGE---ELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDL-NKPDAEPTVYRG--HSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~-~~~~~~~~~~~~--~~~~v~~~~~~~ 73 (134)
+|++||+.+++ ....+..+...+.+++|+|+++ .|++++.||.|++|++ .++.. ..+.+ |...|.+++|+|
T Consensus 34 ~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~--~~~~~~~~~~~v~~l~~~~ 111 (342)
T 1yfq_A 34 SLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF--QALTNNEANLGICRICKYG 111 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE--EECBSCCCCSCEEEEEEET
T ss_pred eEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce--EeccccCCCCceEEEEeCC
Confidence 47899998877 2333334444555599999999 9999999999999999 76542 45677 999999999999
Q ss_pred CCCEEEEeeCCCcEEEEecCC---------CceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSA---------SAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
++.+++++.|+.|++||+++ +++...+.+...+.+++|+|++ +++++.++.|++||+++
T Consensus 112 -~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 112 -DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp -TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEEEESTTEEEEEESSC
T ss_pred -CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-EEEEeCCCeEEEEECCc
Confidence 99999999999999999987 6666666678889999999988 55556889999999864
No 109
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.1e-23 Score=131.11 Aligned_cols=133 Identities=10% Similarity=0.125 Sum_probs=104.6
Q ss_pred CeeEeecC---CCceeeEEee------------CCCceeeEE--EccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC--
Q psy6446 1 MGTVWDAV---SGEELHSFQH------------PHIVKSSVH--FATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-- 61 (134)
Q Consensus 1 ~i~v~d~~---~~~~~~~~~~------------~~~~~~~~~--~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-- 61 (134)
+|++||+. +++.+..+.. ....+.++. ++++++.|++++.|+.|++||++++... ..+.+
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~ 212 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL-QIIENSP 212 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE-EEEECCG
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee-EEEccCC
Confidence 47899984 5555444331 222333355 5678999999999999999999986543 45666
Q ss_pred CCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEcc----CCcEEEEe-cCCeEEEEeCCC
Q psy6446 62 HSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISR----DGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 62 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~----~~~~l~~~-~~~~i~i~d~~t 134 (134)
|.+.|.+++|+|+++++++++.|+.|++||+++++++..+. +...|.+++|+| ++.+++++ .|+.|++||+++
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 88999999999999999999999999999999999888774 456789996664 57788876 679999999863
No 110
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.90 E-value=2e-22 Score=140.31 Aligned_cols=133 Identities=29% Similarity=0.550 Sum_probs=115.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+|++||+.+++.+..+..+...+.++.|+| ++..+++++.|+.|++||+.++.. ...+.+|.+.|.+++|+|+++.+
T Consensus 680 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC-RNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-EEEECCCSSCEEEEEECSSTTEE
T ss_pred eEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch-hheecCCCCCEEEEEEecCCCEE
Confidence 489999999999999996666677799999 566899999999999999998654 45678999999999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEec--------------CCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEF--------------GAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
++++.|+.|++||+.+++....+.. ...+.+++|+|+|..++++.++.+.+||+.+
T Consensus 759 ~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~ 828 (1249)
T 3sfz_A 759 ASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHT 828 (1249)
T ss_dssp EEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTT
T ss_pred EEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecC
Confidence 9999999999999999887776652 2267899999999999998899999999753
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5.5e-23 Score=137.66 Aligned_cols=133 Identities=14% Similarity=0.127 Sum_probs=108.7
Q ss_pred CeeEeecC--CCceeeEEeeCCCceeeEEEccC--CcEEEEecCCCeEEEEECCCCC-CCCeEEeCCCCCEeEEEEeeC-
Q psy6446 1 MGTVWDAV--SGEELHSFQHPHIVKSSVHFATD--SYRLATGSNDKNIRIYDLNKPD-AEPTVYRGHSSGIKHVQFFKN- 74 (134)
Q Consensus 1 ~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~~v~~~~~~~~- 74 (134)
+|++||+. +++.+..+..+...+.+++|+|+ ++.|++|+.||.|++||+.++. .....+.+|...|.+++|+|+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~ 111 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHE 111 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCC
Confidence 48899998 55667777755666666999987 9999999999999999998754 133456789999999999998
Q ss_pred -CCEEEEeeCCCcEEEEecCCCcee---EEEecCCCCeEEEEcc-------------CCcEEEEe-cCCeEEEEeCC
Q psy6446 75 -NTRLISCAEDKTVRLWDVSASAEV---QKLEFGAVPNSLEISR-------------DGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 75 -~~~l~~~~~d~~i~~~d~~~~~~~---~~~~~~~~v~~~~~~~-------------~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.+++++.||.|++||++++... ....+...+.+++|+| ++.+++++ .||.|++||++
T Consensus 112 ~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 112 YGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp GCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc
Confidence 999999999999999999887332 2233678899999999 47777765 78999999975
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.90 E-value=2.9e-22 Score=130.78 Aligned_cols=129 Identities=16% Similarity=0.202 Sum_probs=111.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCCCeEEeCCCC---CEeEEEEeeC-CC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAEPTVYRGHSS---GIKHVQFFKN-NT 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~ 76 (134)
|++|| +++.+..+..+...+.++.|+|+++ .+++++.|+.+++||+.+... ...+.+|.. .|.+++|+|+ ++
T Consensus 144 v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 144 FISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF-SASDRTHHKQGSFVRDVEFSPDSGE 220 (615)
T ss_dssp EEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE-EEEECSSSCTTCCEEEEEECSTTCC
T ss_pred EEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcce-eeeecccCCCCceEEEEEECCCCCC
Confidence 45566 6777888886666666799999997 899999999999999987553 356778988 9999999999 99
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEE-----ecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKL-----EFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++++++.|+.|++||+.+++....+ .+...+.+++|+ ++.+++++ .|+.|++||+++
T Consensus 221 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 221 FVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred EEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 9999999999999999999999888 677889999999 99888875 689999999863
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=8.6e-22 Score=122.87 Aligned_cols=131 Identities=13% Similarity=0.173 Sum_probs=108.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEE-EEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRL-ATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||+.+++.+..+.++..+.. ++|+|+++.+ ++++.|+.|++||+.+++.. ..+..+ ..+.+++|+|+++.++
T Consensus 13 ~v~v~d~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~-~~~~~~-~~v~~~~~spdg~~l~ 89 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVGSNPMG-AVISPDGTKVYVANAHSNDVSIIDTATNNVI-ATVPAG-SSPQGVAVSPDGKQVY 89 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSSEEE-EEECTTSSEEEEEEGGGTEEEEEETTTTEEE-EEEECS-SSEEEEEECTTSSEEE
T ss_pred EEEEEECCCCeEEEEeecCCCcce-EEECCCCCEEEEECCCCCeEEEEECCCCeEE-EEEECC-CCccceEECCCCCEEE
Confidence 479999999999999887766554 9999999877 67778999999999876543 344444 4899999999999886
Q ss_pred E-eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEE-Ee-cCCeEEEEeCCC
Q psy6446 80 S-CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTIT-VT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~-~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~~~~i~i~d~~t 134 (134)
. ++.++.|++||+.+++....+.....+.+++|+|+++.++ ++ .++.|++||+++
T Consensus 90 ~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 90 VTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 5 4567999999999999988888888899999999998774 55 579999999863
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.90 E-value=5.8e-22 Score=125.05 Aligned_cols=131 Identities=22% Similarity=0.353 Sum_probs=103.7
Q ss_pred CeeEeecCCCce----eeEEeeCCCceeeEEEccCC-cEEEE--ecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee
Q psy6446 1 MGTVWDAVSGEE----LHSFQHPHIVKSSVHFATDS-YRLAT--GSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~l~~--~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 73 (134)
.+++||..+++. +.....+...+.+++|+|.+ ..+++ |+.|+.|++||+.++... ..+. +...+.++.|+|
T Consensus 253 ~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~-~~~~-~~~~v~~~~~~~ 330 (420)
T 4gga_A 253 LVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL-SAVD-AHSQVCSILWSP 330 (420)
T ss_dssp CEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE-EEEE-CSSCEEEEEEET
T ss_pred cceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc-eeec-cccceeeeeecC
Confidence 478999987653 34444445555669999955 45544 568999999999986644 3344 446799999999
Q ss_pred CCCEEEEee--CCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 74 NNTRLISCA--EDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 74 ~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.+++++ .|+.|++||+.+++++..+. |...|.+++|+|+|.+|+++ .|++|++||+.
T Consensus 331 ~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 331 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 999988765 78999999999999998887 67899999999999988875 78999999974
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.90 E-value=9.5e-23 Score=125.01 Aligned_cols=131 Identities=12% Similarity=0.126 Sum_probs=106.8
Q ss_pred CeeEeecCC---------CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCC-CCCC-CeEEeCCCCCEeEE
Q psy6446 1 MGTVWDAVS---------GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK-PDAE-PTVYRGHSSGIKHV 69 (134)
Q Consensus 1 ~i~v~d~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~-~~~~-~~~~~~~~~~v~~~ 69 (134)
+|++||+.+ ++++..+.+...+.. ++|+|++ +++++.|+.|++||+++ .... ......|...+.++
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i 199 (342)
T 1yfq_A 123 LIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFT-MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDV 199 (342)
T ss_dssp EEEEECHHHHTTBCEEEEESCSSSSSSCCCEEE-EEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEE
T ss_pred eEEEEcccccccccccccCCeeeEEeeCCceEE-EEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEE
Confidence 378999987 777777775555554 9999877 99999999999999987 5433 23445688899999
Q ss_pred EEee-CCCEEEEeeCCCcEEEEecCCC------ceeEEEec-CC---------CCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 70 QFFK-NNTRLISCAEDKTVRLWDVSAS------AEVQKLEF-GA---------VPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 70 ~~~~-~~~~l~~~~~d~~i~~~d~~~~------~~~~~~~~-~~---------~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
+|+| +++.+++++.|+.+++|++... +....+.. .. .+.+++|+|++++++++ .||.|++||
T Consensus 200 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp EECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 9999 9999999999999999999876 66666653 22 89999999999988875 689999999
Q ss_pred CCC
Q psy6446 132 ANS 134 (134)
Q Consensus 132 ~~t 134 (134)
+++
T Consensus 280 ~~~ 282 (342)
T 1yfq_A 280 LQT 282 (342)
T ss_dssp TTT
T ss_pred Ccc
Confidence 864
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.90 E-value=2.3e-21 Score=117.74 Aligned_cols=131 Identities=19% Similarity=0.303 Sum_probs=103.5
Q ss_pred CeeEeecCCCcee----eEEeeCCCceeeEEEccCCcEE---EEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee
Q psy6446 1 MGTVWDAVSGEEL----HSFQHPHIVKSSVHFATDSYRL---ATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l---~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 73 (134)
+|++||+.+++.. .........+.++.++|++..+ ++++.++.|++|+....... ....+...+..+.|+|
T Consensus 173 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~--~~~~~~~~v~~~~~~~ 250 (318)
T 4ggc_A 173 LVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL--SAVDAHSQVCSILWSP 250 (318)
T ss_dssp CEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE--EEEECSSCEEEEEEET
T ss_pred ceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc--ccccceeeeeeeeecc
Confidence 5899999887642 2333344445559999865533 46788999999999875533 3455778899999999
Q ss_pred CCCEEEEee--CCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 74 NNTRLISCA--EDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 74 ~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.+++++ .|+.|++||+++++++..+. |...|.+++|+|++++|+++ .|++|++||+.
T Consensus 251 ~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 251 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 999887654 78999999999999998887 67899999999999988875 78999999985
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=2.6e-21 Score=122.48 Aligned_cols=128 Identities=22% Similarity=0.418 Sum_probs=107.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC--eEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP--TVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+|++||+.+++.+..+.++...+.++.|+ ++.+++++.||.|++||+.++.... ..+.+|...|.+++| +++.+
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l 269 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 269 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEE
T ss_pred eEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEE
Confidence 58999999999999998666666668886 4699999999999999998865432 456789999999999 78999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++++.|+.|++||+++++.+..+. +...+.++.++ +.+++++ .||.|++||+++
T Consensus 270 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 270 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT
T ss_pred EEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCC
Confidence 999999999999999999888887 56788888884 5666665 789999999864
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.89 E-value=5e-22 Score=125.77 Aligned_cols=126 Identities=21% Similarity=0.391 Sum_probs=104.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++++..+..+...+.++.| +++.+++|+.||.|++||++++.. ...+.+|...|.+++| +++.+++
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~--~~~~l~s 351 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRF--DNKRIVS 351 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEC--CSSEEEE
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCE-EEEEeCCcCcEEEEEe--cCCEEEE
Confidence 4789999999999999966666666888 478999999999999999998654 4567889999999999 7899999
Q ss_pred eeCCCcEEEEecCCCc---------eeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASA---------EVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~---------~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.||.|++||+.+++ +...+. +...|.+++| ++.+++++ .||.|++||+.
T Consensus 352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred EeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 9999999999997665 555554 5788999999 56677765 68999999985
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=3.7e-21 Score=122.00 Aligned_cols=128 Identities=23% Similarity=0.440 Sum_probs=106.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC---CCCCEeEEEEeeCCCE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG---HSSGIKHVQFFKNNTR 77 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~ 77 (134)
+|++||+.+++++..+..+...+.++.+ +++.+++++.||.|++||++++... ..+.. |...|.+++|+ +++
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~~--~~~ 374 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCL-QTLQGPNKHQSAVTCLQFN--KNF 374 (445)
T ss_dssp CEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEE-EEECSTTSCSSCEEEEEEC--SSE
T ss_pred eEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEE-EEEccCCCCCCCEEEEEEC--CCE
Confidence 4889999999999888865555554665 5779999999999999999886543 44554 78899999994 689
Q ss_pred EEEeeCCCcEEEEecCCCceeEEE------ecCCCCeEEEEccCCcEEEEe-cCCe----EEEEeCC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKL------EFGAVPNSLEISRDGTTITVT-HGSC----VTFLDAN 133 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~-~~~~----i~i~d~~ 133 (134)
+++++.||.|++||+.+++.+..+ .+...+.+++|+|++.+++++ .||. |.+||++
T Consensus 375 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred EEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 999999999999999999998888 246789999999999998876 5675 9999986
No 120
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.6e-22 Score=128.30 Aligned_cols=112 Identities=12% Similarity=0.168 Sum_probs=92.6
Q ss_pred ceeeEEEccCCcEEE----EecCCCeEEEEECCCC-----C--CC---CeEEeCCCCCEeEEEEeeC-CCEEEEeeCCCc
Q psy6446 22 VKSSVHFATDSYRLA----TGSNDKNIRIYDLNKP-----D--AE---PTVYRGHSSGIKHVQFFKN-NTRLISCAEDKT 86 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~----~~~~d~~v~i~~~~~~-----~--~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~ 86 (134)
.+.+++|+|++++|+ +++.|+.|++||+.+. . .. ...+.+|...|.+++|+|+ +..+++++.|+.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 355599999999999 7889999999998653 1 11 2334568999999999997 789999999999
Q ss_pred EEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 87 VRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 87 i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|++||++++....... +...+.+++|+|+|.+|+++ .||.|++||++
T Consensus 174 v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 9999999886554333 56789999999999988876 68999999975
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=1.3e-20 Score=117.60 Aligned_cols=131 Identities=13% Similarity=0.247 Sum_probs=108.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE-
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL- 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l- 78 (134)
+|++||+.+++.+..+.++..+.. ++|+|+++.|+ +++.++.|++||+.+++.. ..+. +...+.+++|+|+++.+
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~~v~~-~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~-~~~~-~~~~~~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGSSPQG-VAVSPDGKQVYVTNMASSTLSVIDTTSNTVA-GTVK-TGKSPLGLALSPDGKKLY 131 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSSEEE-EEECTTSSEEEEEETTTTEEEEEETTTTEEE-EEEE-CSSSEEEEEECTTSSEEE
T ss_pred eEEEEECCCCeEEEEEECCCCccc-eEECCCCCEEEEEECCCCEEEEEECCCCeEE-EEEe-CCCCcceEEECCCCCEEE
Confidence 478999999999998886665544 99999999875 5556799999999886543 3344 44578999999999987
Q ss_pred EEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEE-Ee-cCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTIT-VT-HGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~~~~i~i~d~~t 134 (134)
++++.++.|.+||+.+++....+.....+.+++|+|+++.++ ++ .++.|++||+++
T Consensus 132 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 132 VTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 678889999999999999988888777889999999998774 44 579999999864
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=3.3e-21 Score=117.82 Aligned_cols=133 Identities=11% Similarity=0.013 Sum_probs=95.9
Q ss_pred CeeEeec-CCCceeeEEeeCCCceeeEEEcc---CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCC---CCEeEEEEee
Q psy6446 1 MGTVWDA-VSGEELHSFQHPHIVKSSVHFAT---DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHS---SGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~---~~v~~~~~~~ 73 (134)
+|++|++ .+|+.+..+..+......++|++ ++..|++++.|+.|++||+.+++.. ..+.+|. ..+.+++|+|
T Consensus 158 ~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l-~tL~g~~~~v~~v~~vafSp 236 (356)
T 2w18_A 158 QVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL-KKMHIDDSYQASVCHKAYSE 236 (356)
T ss_dssp EEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE-EEEECCC---CCCEEEEEEE
T ss_pred cEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE-EEEcCCCcceeeeEEEEECC
Confidence 3788998 45887777775555555588888 7799999999999999999997654 4566543 3677889999
Q ss_pred CCCEE------------EEeeCCCcEEEEecCCCceeEEEec----CCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 74 NNTRL------------ISCAEDKTVRLWDVSASAEVQKLEF----GAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l------------~~~~~d~~i~~~d~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+++.+ ++++.|+++++||..+++.+..+.. ......+..+.++.+++++ .|++|++||+++
T Consensus 237 dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 237 MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCC
Confidence 99876 5577899999999999988766531 1111123333346677776 689999999874
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=8.9e-21 Score=120.28 Aligned_cols=126 Identities=25% Similarity=0.463 Sum_probs=88.2
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++||+.+++.+..+..+...+.++.|+ ++.+++++.||.|++||+.++.. ...+.+|...+.++++ +++.+++
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~v~~~~~--~~~~l~~ 254 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC-LHVLMGHVAAVRCVQY--DGRRVVS 254 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE-EEEEECCSSCEEEEEE--CSSCEEE
T ss_pred eEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE-EEEEcCCcccEEEEEE--CCCEEEE
Confidence 46777777777777777555555557664 45677777777888887776543 3456677777777777 6777778
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++.|+.|++||+++++....+. +...+.++.| ++.+++++ .|+.|++||++
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC
Confidence 8888888888877777776665 4566777777 56666654 57888888875
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.88 E-value=2.3e-21 Score=122.29 Aligned_cols=133 Identities=13% Similarity=0.139 Sum_probs=110.1
Q ss_pred CeeEeecCCCceeeEEe-----eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC
Q psy6446 1 MGTVWDAVSGEELHSFQ-----HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 75 (134)
+|++||+.+++.+..+. .+...+.+++|+++++.+++++.|+.|++||++++... ..+..|...+.+++|+|++
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~ 223 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK-ATVDLTGKWSKILLYDPIR 223 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE-EEEECSSSSEEEEEEETTT
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE-EEEcCCCCCeeEEEEcCCC
Confidence 48999999998886432 34445666999999999999999999999999876543 4566888899999999999
Q ss_pred CEEE-EeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec---------CCeEEEEeCCC
Q psy6446 76 TRLI-SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH---------GSCVTFLDANS 134 (134)
Q Consensus 76 ~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------~~~i~i~d~~t 134 (134)
+.++ +++.++.|.+||+++++....+.....+.+++|+|++++++++. |+.|++||+++
T Consensus 224 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~ 292 (433)
T 3bws_A 224 DLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK 292 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT
T ss_pred CEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC
Confidence 9885 45579999999999998888777777789999999998877643 67999999863
No 125
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.88 E-value=5.6e-22 Score=123.30 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=77.4
Q ss_pred eeEeecCCCce----eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEE----LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
+++||+..+.. ...+..+...+.+++|+|+|++|++|+.|+.|++||+++++.....+.+|...|++++|+||+++
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~ 326 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTY 326 (365)
T ss_dssp EEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCE
T ss_pred EeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCE
Confidence 56788766543 23444455556669999999999999999999999999876554445789999999999999999
Q ss_pred EEEeeCCCcEEEEecCCC
Q psy6446 78 LISCAEDKTVRLWDVSAS 95 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~ 95 (134)
|++++.|++|+|||+...
T Consensus 327 laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 327 VASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEETTSEEEEEECCTT
T ss_pred EEEEeCCCeEEEEEcCCC
Confidence 999999999999999643
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=3.4e-22 Score=125.30 Aligned_cols=107 Identities=13% Similarity=0.181 Sum_probs=87.5
Q ss_pred EccCCcEEEEecCCCeEEEEECCCCCCCC----eEEeCCCCCEeEEEEee--------CCCEEEEeeCCCcEEEEecCCC
Q psy6446 28 FATDSYRLATGSNDKNIRIYDLNKPDAEP----TVYRGHSSGIKHVQFFK--------NNTRLISCAEDKTVRLWDVSAS 95 (134)
Q Consensus 28 ~~~~~~~l~~~~~d~~v~i~~~~~~~~~~----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~~~d~~~~ 95 (134)
+.+++..|++++.|+.|++||.+++.... ..+.+|.+.|.+++|+| ++++|++++.|++|++||+.++
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 34466789999999999999998754321 23468999999999998 7899999999999999999877
Q ss_pred ceeE-EEecCCCCeEEEEccCCc-EEEEe-cCCeEEEEeCCC
Q psy6446 96 AEVQ-KLEFGAVPNSLEISRDGT-TITVT-HGSCVTFLDANS 134 (134)
Q Consensus 96 ~~~~-~~~~~~~v~~~~~~~~~~-~l~~~-~~~~i~i~d~~t 134 (134)
.+.. .+.+...+.+++|+|++. +++++ .|+.|++||+++
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 6554 445788999999999885 56654 789999999864
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=1.4e-21 Score=124.00 Aligned_cols=131 Identities=8% Similarity=-0.018 Sum_probs=99.9
Q ss_pred CeeEeecCCC--------ceee---EEeeCCCceeeEEEccC-CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeE
Q psy6446 1 MGTVWDAVSG--------EELH---SFQHPHIVKSSVHFATD-SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKH 68 (134)
Q Consensus 1 ~i~v~d~~~~--------~~~~---~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~ 68 (134)
+|++||+.++ +++. .+.++...+.+++|+|+ ++.|++++.||.|++||++++.. .....+|...+.+
T Consensus 119 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~-~~~~~~~~~~v~~ 197 (434)
T 2oit_A 119 IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK-VCATLPSTVAVTS 197 (434)
T ss_dssp EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE-EEEEECGGGCEEE
T ss_pred eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc-eeeccCCCCceeE
Confidence 4789998755 3322 33334455566999997 88999999999999999988643 2345678889999
Q ss_pred EEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecC--------CCCeEEEEccCCcEEEEe--cCC------eEEEEeC
Q psy6446 69 VQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG--------AVPNSLEISRDGTTITVT--HGS------CVTFLDA 132 (134)
Q Consensus 69 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~--~~~------~i~i~d~ 132 (134)
++|+|++++|++++.|+.|++||.+ ++....+... ..+.+++|++++.++++. .+| .+++||+
T Consensus 198 v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 198 VCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEEC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEe
Confidence 9999999999999999999999998 5555544321 267899999998887653 333 4889998
Q ss_pred C
Q psy6446 133 N 133 (134)
Q Consensus 133 ~ 133 (134)
+
T Consensus 277 ~ 277 (434)
T 2oit_A 277 P 277 (434)
T ss_dssp C
T ss_pred c
Confidence 5
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=3.5e-20 Score=116.99 Aligned_cols=129 Identities=13% Similarity=0.059 Sum_probs=100.0
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCC---eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDK---NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~---~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
+|++||+.. .....+. +... +.+++|+|+|+.|++++.++ .|++||+.+++. ..+..|...+.+++|+|+++
T Consensus 160 ~i~i~d~~g-~~~~~l~~~~~~-v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~--~~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 160 ELRVSDYDG-YNQFVVHRSPQP-LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--RQVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEEETTS-CSCEEEEEESSC-EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EEEECCSSCEEEEEECTTSS
T ss_pred eEEEEcCCC-CCCEEEeCCCCc-ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE--EEeecCCCcccCEEEcCCCC
Confidence 378999874 4455555 5544 44599999999999998875 999999998653 34667888999999999999
Q ss_pred EEE-EeeCCC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--CC--eEEEEeCC
Q psy6446 77 RLI-SCAEDK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--GS--CVTFLDAN 133 (134)
Q Consensus 77 ~l~-~~~~d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d~~ 133 (134)
.|+ +++.++ .|.+||+.+++......+...+.+++|+|+|++|+.+. ++ .|.+||+.
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred EEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 887 666555 49999999887654444567789999999999888653 34 78888875
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.87 E-value=7.5e-20 Score=115.42 Aligned_cols=129 Identities=11% Similarity=0.165 Sum_probs=107.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEE-EEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRL-ATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|++||+.+++.+..+.+...+.. ++|+|+++.+ ++++.++.+++||+.+++.. ..+ .+...+.+++|+|+++.+++
T Consensus 285 i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~-~~~-~~~~~~~~~~~s~dg~~l~~ 361 (433)
T 3bws_A 285 LGIYSMDKEKLIDTIGPPGNKRH-IVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ-KSI-PVFDKPNTIALSPDGKYLYV 361 (433)
T ss_dssp EEEEETTTTEEEEEEEEEECEEE-EEECSSTTEEEEEETTTTEEEEEETTTTEEE-EEE-ECSSSEEEEEECTTSSEEEE
T ss_pred EEEEECCCCcEEeeccCCCCcce-EEECCCCCEEEEEecCCCEEEEEECCCCcEE-EEe-cCCCCCCeEEEcCCCCEEEE
Confidence 67999999998888776655555 9999999755 66689999999999875433 333 36778999999999998887
Q ss_pred eeC---------------CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-c-CCeEEEEeCC
Q psy6446 81 CAE---------------DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H-GSCVTFLDAN 133 (134)
Q Consensus 81 ~~~---------------d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~d~~ 133 (134)
++. ||.|.+||..+++....+.....+.+++|+|++++++++ . ++.|++|+++
T Consensus 362 ~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 362 SCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 776 569999999999998888887889999999999988764 4 8999999986
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=2e-19 Score=113.52 Aligned_cols=131 Identities=15% Similarity=0.174 Sum_probs=99.2
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCC--eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDK--NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
+|++||+.+++......+.. .+.+++|+|+|+.|+ +++.++ .|++||+.++.. ..+..|...+..++|+|+++.
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~spdg~~ 280 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI--RQVTDGRSNNTEPTWFPDSQN 280 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EECCCCSSCEEEEEECTTSSE
T ss_pred EEEEEECCCCcEEEeecCCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE--EeCcCCCCcccceEECCCCCE
Confidence 37899999988765443544 455599999999887 666655 499999987543 456678889999999999999
Q ss_pred EEEeeC-CC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cC---CeEEEEeCCC
Q psy6446 78 LISCAE-DK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HG---SCVTFLDANS 134 (134)
Q Consensus 78 l~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~---~~i~i~d~~t 134 (134)
|+.++. ++ .|.+||+.+++......+...+.+++|+|+|++|+.+ .+ ..|.+||+++
T Consensus 281 l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 281 LAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp EEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred EEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 987775 44 6788898887654433345677899999999988865 32 5899999864
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=1.7e-18 Score=105.94 Aligned_cols=132 Identities=8% Similarity=0.071 Sum_probs=102.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC-CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN-DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|.+||..+++.+..+....... .++|+|+++.+++++. ++.|.+||+.++.........+..+..+++|+|++++++
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 99 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV 99 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE
Confidence 47899999999988887444444 5999999997666554 889999999886642344555555555599999999998
Q ss_pred EeeCCC---cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEE-e-cCCe-EEEEeCC
Q psy6446 80 SCAEDK---TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV-T-HGSC-VTFLDAN 133 (134)
Q Consensus 80 ~~~~d~---~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~-~~~~-i~i~d~~ 133 (134)
+...++ .|.+||+.+++....+.....+.+++|+|+|+++++ + .++. |.+|++.
T Consensus 100 ~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 100 TVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp ECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred EecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 655553 899999999998888887777899999999985554 3 4477 9999864
No 132
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=2e-18 Score=105.47 Aligned_cols=132 Identities=14% Similarity=0.073 Sum_probs=103.8
Q ss_pred CeeEeecCCCceeeEEeeCC---CceeeEEEccCCcEE-EEecCCCeEEEEECCCCCCCCeEEeCC----CCCEeEEEEe
Q psy6446 1 MGTVWDAVSGEELHSFQHPH---IVKSSVHFATDSYRL-ATGSNDKNIRIYDLNKPDAEPTVYRGH----SSGIKHVQFF 72 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~----~~~v~~~~~~ 72 (134)
+|.+||+.+++.+..+.... .+.. ++|+|+++.+ +++..++.|.+||+.+++........+ ...+..++|+
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s 90 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMV-PMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALS 90 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCC-EEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEEC
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccc-eEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEEC
Confidence 47899999999998887544 3555 9999999766 555667899999998765432221122 1257789999
Q ss_pred eCCCEEEEee------------CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 73 KNNTRLISCA------------EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 73 ~~~~~l~~~~------------~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
|++++++++. .++.|.+||+.+++....+.....+.+++|+|++++++++ ++.|.+||+++
T Consensus 91 ~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~ 163 (337)
T 1pby_B 91 PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVMDPEA 163 (337)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEEETTT
T ss_pred CCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEEECCC
Confidence 9999988875 5789999999998888888777778899999999987777 68899999863
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.81 E-value=9.6e-18 Score=109.07 Aligned_cols=130 Identities=13% Similarity=0.068 Sum_probs=104.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEEC--CCCCCCCeEEeCCCCCEeEEEEee----C
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDL--NKPDAEPTVYRGHSSGIKHVQFFK----N 74 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~--~~~~~~~~~~~~~~~~v~~~~~~~----~ 74 (134)
+|.+||..+++++..+..... ...++|+|+|++|++++.|+.|++||+ .+... ...+. +...+..++|+| +
T Consensus 160 ~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~-~~~i~-~g~~p~~va~sp~~~~d 236 (543)
T 1nir_A 160 QIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK-VAEIK-IGIEARSVESSKFKGYE 236 (543)
T ss_dssp EEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE-EEEEE-CCSEEEEEEECCSTTCT
T ss_pred eEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcE-EEEEe-cCCCcceEEeCCCcCCC
Confidence 478999999999999984333 445999999999999999999999999 55443 23344 456689999999 9
Q ss_pred CCEEEEeeC-CCcEEEEecCCCceeEEEec------------CCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 75 NTRLISCAE-DKTVRLWDVSASAEVQKLEF------------GAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 75 ~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
++++++++. +++|.+||..+++++..+.. ...+..+.++|++..++++ .++.|.+||+.
T Consensus 237 g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~ 310 (543)
T 1nir_A 237 DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 310 (543)
T ss_dssp TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECT
T ss_pred CCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEec
Confidence 999988874 89999999999998887763 1257889999988765543 56999999975
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.80 E-value=4.9e-18 Score=104.00 Aligned_cols=131 Identities=15% Similarity=0.108 Sum_probs=95.4
Q ss_pred CeeEeecC-CC--ceeeEEeeCCCceeeEEEccCCcEEEEecCC-CeEEEEECC--CCCC-CCeEEeCCCCCEeEEEEee
Q psy6446 1 MGTVWDAV-SG--EELHSFQHPHIVKSSVHFATDSYRLATGSND-KNIRIYDLN--KPDA-EPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-~~v~i~~~~--~~~~-~~~~~~~~~~~v~~~~~~~ 73 (134)
+|++||+. ++ +.+..+.+...+.. ++|+|+++.|++++.+ +.+.+|++. ++.. ....+..+ ..+..++|+|
T Consensus 16 ~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~ 93 (343)
T 1ri6_A 16 QIHVWNLNHEGALTLTQVVDVPGQVQP-MVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDH 93 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCCCC-EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECT
T ss_pred eEEEEEECCCCcEEEeeeEecCCCCce-EEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcC
Confidence 37899985 34 33444555555555 9999999988888776 899999997 3321 11223333 3789999999
Q ss_pred CCCEEEEeeC-CCcEEEEecC---CCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 74 NNTRLISCAE-DKTVRLWDVS---ASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 74 ~~~~l~~~~~-d~~i~~~d~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
+++++++++. ++.|.+||+. ..+....+.....+.+++|+|++++++++ .++.|.+||+.
T Consensus 94 dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 94 QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 9998876654 7889999994 33444455555678999999999877754 57999999975
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=3e-17 Score=100.95 Aligned_cols=130 Identities=14% Similarity=0.083 Sum_probs=103.1
Q ss_pred eeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe----CCCCCEeEEEEeeCCC
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR----GHSSGIKHVQFFKNNT 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~ 76 (134)
|.+||..+++.+..+. ....... +.|+|+++.+++++.++.+.+||+.+++... .+. ++...+..++|+|+++
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQNTGKMSTG-LALDSEGKRLYTTNADGELITIDTADNKILS-RKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp EEEEETTTTEEEEEECCCCTTCCC-CEEETTTTEEEEECTTSEEEEEETTTTEEEE-EEECCCSSSCCCEEEEEEETTTT
T ss_pred EEEEcCCCCceEEEecCCCCccce-EEECCCCCEEEEEcCCCeEEEEECCCCeEEE-EEEcCCCCCCcccceEEECCCCC
Confidence 7899999999988887 4433444 9999999999999999999999998765432 232 2455688899999999
Q ss_pred EEEEeeC-CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEE-e-cCCeEEEEeCCC
Q psy6446 77 RLISCAE-DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV-T-HGSCVTFLDANS 134 (134)
Q Consensus 77 ~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~-~~~~i~i~d~~t 134 (134)
.++.++. ++.|.+||..+++....+..... ..++|+|+++++++ . .++.|.+||+.+
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 8776655 58999999999998887776543 67999999986654 4 479999999864
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.80 E-value=1.8e-17 Score=101.33 Aligned_cols=133 Identities=11% Similarity=0.153 Sum_probs=102.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEe-cCCCe-EEEEECCCCCCCCe---EEeCCCCCEeEEEEeeCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATG-SNDKN-IRIYDLNKPDAEPT---VYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~-v~i~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~ 75 (134)
+|.+||+.+++.+..+........ ++|+|+|++++++ ..++. +.+|++........ ........+..++|+|++
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~~~~~-~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg 187 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPYDAVG-IAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDG 187 (331)
T ss_dssp EEEEEETTTTEEEEEEECCTTEEE-EEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTS
T ss_pred cEEEEECCCCCeEEEEECCCCccc-eEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCC
Confidence 378999999999888876555554 9999999866555 45577 99999886443211 112344568999999999
Q ss_pred CEEEEe-eCCCcEEEEecCCCce---eEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCCC
Q psy6446 76 TRLISC-AEDKTVRLWDVSASAE---VQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDANS 134 (134)
Q Consensus 76 ~~l~~~-~~d~~i~~~d~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~t 134 (134)
++++.+ ..++.|.+||+.+++. ...+.....+..++|+|+|++++++ .++.|.+||+++
T Consensus 188 ~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 188 NFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp SEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred CEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 976554 4688999999999888 7777777888999999999977654 358899999864
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=4.1e-18 Score=102.19 Aligned_cols=128 Identities=12% Similarity=0.107 Sum_probs=94.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCC-CCCCCeEEeCC-CCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK-PDAEPTVYRGH-SSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~l 78 (134)
+|++||+.+++......+...+.. ++|+|++++|++++ ++.|++||+.+ +... .....+ ...+.+++|+|+++++
T Consensus 23 ~i~~~d~~~~~~~~~~~~~~~v~~-~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l 99 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQTPELFEA-PNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE-KVDTGFATICNNDHGISPDGALY 99 (297)
T ss_dssp EEEEEETTTTEEEEEEEESSCCEE-EEECTTSSEEEEEE-TTEEEEEESSSCCSCE-ECCCTTCCCBCSCCEECTTSSEE
T ss_pred eEEEEeCCCCceeeeccCCcceEe-eEECCCCCEEEEEc-CCeEEEEeCCCCCCce-EeccccccccccceEECCCCCEE
Confidence 478999999888766666655555 99999999999986 78999999987 5432 333344 3678899999999999
Q ss_pred EEee--CCCcEEEE--ecCCCceeEEEecCCCCeEEEEccCCcEEE-Ee-cCCeEEEEeC
Q psy6446 79 ISCA--EDKTVRLW--DVSASAEVQKLEFGAVPNSLEISRDGTTIT-VT-HGSCVTFLDA 132 (134)
Q Consensus 79 ~~~~--~d~~i~~~--d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~~~~i~i~d~ 132 (134)
++++ .++...+| +..+++ ...+.....+..++|+|+++.++ ++ .++.+.+|++
T Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 100 AISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp EEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred EEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEE
Confidence 9888 33444555 444444 34444455688899999999877 33 5788888875
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=4.8e-17 Score=100.09 Aligned_cols=131 Identities=8% Similarity=0.062 Sum_probs=104.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCCCCCeEEeCCCC---------CEeEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDAEPTVYRGHSS---------GIKHVQF 71 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~---------~v~~~~~ 71 (134)
|.+||..+++.+..+........ ++|+|+++.++ +...++.|.+||..+++.. ..+..+.. .+..+.|
T Consensus 71 v~~~d~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 148 (353)
T 3vgz_A 71 VYRLDPVTLEVTQAIHNDLKPFG-ATINNTTQTLWFGNTVNSAVTAIDAKTGEVK-GRLVLDDRKRTEEVRPLQPRELVA 148 (353)
T ss_dssp EEEECTTTCCEEEEEEESSCCCS-EEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEEESCCCCCCSSCCCCEEEEEEE
T ss_pred EEEEcCCCCeEEEEEecCCCcce-EEECCCCCEEEEEecCCCEEEEEeCCCCeeE-EEEecCCCccccccCCCCCceEEE
Confidence 78999999999998886666666 99999998655 4566799999999886543 33333322 2788999
Q ss_pred eeCCCEEEEee--CCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 72 FKNNTRLISCA--EDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 72 ~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+|+++.++.++ .++.|.+||..+++....+. ....+.+++|+|++++++++ .++.|.+||+++
T Consensus 149 s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~ 215 (353)
T 3vgz_A 149 DDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTAD 215 (353)
T ss_dssp ETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT
T ss_pred CCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 99999887665 47889999999999888887 55668899999999987765 679999999864
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.77 E-value=1.8e-17 Score=110.80 Aligned_cols=119 Identities=13% Similarity=0.088 Sum_probs=91.3
Q ss_pred CeeEeecCCCceeeEEeeCCC------------------------ceeeEEEccCCcEEEEecCCCeEEEEECCCCC--C
Q psy6446 1 MGTVWDAVSGEELHSFQHPHI------------------------VKSSVHFATDSYRLATGSNDKNIRIYDLNKPD--A 54 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~--~ 54 (134)
+|++||+.+++....+.+... .+..++|+|||+.|++++. +.|++||+.++. .
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~ 143 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA 143 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcce
Confidence 378999999988777763321 1445999999999999886 899999998762 2
Q ss_pred CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCC-----------------CeEEEEccCCc
Q psy6446 55 EPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAV-----------------PNSLEISRDGT 117 (134)
Q Consensus 55 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----------------v~~~~~~~~~~ 117 (134)
. ..+..+...+..++|+|||++|+.++. +.|.+||+.+++.......... +..+.|+|||+
T Consensus 144 ~-~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~ 221 (741)
T 2ecf_A 144 V-RQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS 221 (741)
T ss_dssp C-CBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS
T ss_pred E-EEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCC
Confidence 2 335667788999999999999998874 5899999988776544332221 47899999999
Q ss_pred EEEEe
Q psy6446 118 TITVT 122 (134)
Q Consensus 118 ~l~~~ 122 (134)
+|+.+
T Consensus 222 ~l~~~ 226 (741)
T 2ecf_A 222 AIAYA 226 (741)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 88765
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.77 E-value=2.3e-17 Score=101.30 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=96.8
Q ss_pred CeeEeecCCCceeeEEeeCC--CceeeEEEccCCcEEE-EecCCCeEEEEECCCCCCCCeEEe-CC-----CCCEeEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPH--IVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDAEPTVYR-GH-----SSGIKHVQF 71 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~-~~-----~~~v~~~~~ 71 (134)
+|.+||+.+++.+..+.... .... ++|+|+++.++ +...++.|.+||+.+++... .+. .+ ...+..++|
T Consensus 22 ~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~-~~~~~~~~~~~~~~~~~~~~ 99 (349)
T 1jmx_B 22 NLHVVDVASDTVYKSCVMPDKFGPGT-AMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF-HANLSSVPGEVGRSMYSFAI 99 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCCSSCE-EEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEESCCSTTEEEECSSCEEE
T ss_pred eEEEEECCCCcEEEEEecCCCCCCce-eEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE-EEEcccccccccccccceEE
Confidence 47899999999988887544 4555 99999998664 55678999999998765332 232 22 223788999
Q ss_pred eeCCCEEEEeeCC------------CcEEEEecCCCc---eeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 72 FKNNTRLISCAED------------KTVRLWDVSASA---EVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 72 ~~~~~~l~~~~~d------------~~i~~~d~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
+|+++++++++.+ +.|.+||+.+++ ..........+.+++|+|+|+ ++++ ++.|.+||+++
T Consensus 100 spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~-~~~i~~~d~~~ 175 (349)
T 1jmx_B 100 SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA-GPDIYKMDVKT 175 (349)
T ss_dssp CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE-SSSEEEECTTT
T ss_pred CCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEc-cCcEEEEeCCC
Confidence 9999999988865 899999998843 344555566788999999999 4443 33499999753
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.77 E-value=1.1e-17 Score=111.53 Aligned_cols=119 Identities=10% Similarity=0.046 Sum_probs=91.3
Q ss_pred CeeEeecCCCceeeEEeeCCC---ceeeEEEccCCcEEEEecCC---------CeEEEEECCCCCCCCeEEe---CCCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHI---VKSSVHFATDSYRLATGSND---------KNIRIYDLNKPDAEPTVYR---GHSSG 65 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d---------~~v~i~~~~~~~~~~~~~~---~~~~~ 65 (134)
+|++||+.+++....+.++.. .+..++|+|||++|++++.+ +.+++||+.++.. ..+. +|...
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~ 115 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAK 115 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce--EeccCCcccccc
Confidence 589999999988877775443 24459999999999988764 7888999988653 2222 34445
Q ss_pred EeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEec-CCC------------------CeEEEEccCCcEEEEe
Q psy6446 66 IKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEF-GAV------------------PNSLEISRDGTTITVT 122 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~------------------v~~~~~~~~~~~l~~~ 122 (134)
+..++|+|||+.|+.++. +.|.+||..+++....... ... +.+++|+|||+.|+.+
T Consensus 116 ~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~ 190 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYA 190 (723)
T ss_dssp CSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEE
T ss_pred ccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEE
Confidence 889999999999998876 7899999998877655543 222 2789999999988865
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=4.1e-17 Score=99.69 Aligned_cols=89 Identities=16% Similarity=0.149 Sum_probs=71.4
Q ss_pred EEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-
Q psy6446 44 IRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT- 122 (134)
Q Consensus 44 v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 122 (134)
+.+||+.+++.....+..+...+..++|+|++++++++ ++.|.+||+.+++....+.....+.+++|+|++++++++
T Consensus 221 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 221 LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEES
T ss_pred eEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEc
Confidence 56778776543322334555678899999999999887 689999999999988888777788999999999977765
Q ss_pred cCCeEEEEeCCC
Q psy6446 123 HGSCVTFLDANS 134 (134)
Q Consensus 123 ~~~~i~i~d~~t 134 (134)
.++.|.+||+++
T Consensus 299 ~~~~i~v~d~~~ 310 (337)
T 1pby_B 299 ALGDLAAYDAET 310 (337)
T ss_dssp BSSEEEEEETTT
T ss_pred CCCcEEEEECcC
Confidence 679999999864
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=1.3e-17 Score=109.03 Aligned_cols=125 Identities=10% Similarity=-0.034 Sum_probs=99.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC----CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND----KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
+.+||+.+++......++. ..+.|+|||+.|++++.+ +.|++||+.++.. ..+..|.+.+..++|+|||+.
T Consensus 134 ~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~--~~l~~~~~~~~~~~~SpDG~~ 208 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL--RVFDSGEGSFSSASISPGMKV 208 (582)
T ss_dssp EEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC--EEECCSSCEEEEEEECTTSCE
T ss_pred ceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc--eEeecCCCccccceECCCCCE
Confidence 3589999888766665554 449999999999988776 7899999987653 356788888999999999999
Q ss_pred EEEeeCCC--cEEEEecCCCceeEEEe-cCCCCeEEE--------EccCCcEEEEe-cCCeEEEEeC
Q psy6446 78 LISCAEDK--TVRLWDVSASAEVQKLE-FGAVPNSLE--------ISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 78 l~~~~~d~--~i~~~d~~~~~~~~~~~-~~~~v~~~~--------~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
|+++..++ .|.+||+.+++.. .+. +...+..+. |+|||.+++++ .++.+++|++
T Consensus 209 l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 209 TAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 99888888 8999999988876 333 334455566 99999766665 6899999985
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=9.9e-18 Score=111.53 Aligned_cols=131 Identities=18% Similarity=0.097 Sum_probs=96.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCC-----CCCCCeEEeCCCCC----------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK-----PDAEPTVYRGHSSG---------- 65 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~-----~~~~~~~~~~~~~~---------- 65 (134)
+|++||+.+++......+...+.. ++|+|+|+.|+++ .++.|++|++.+ +... .....+...
T Consensus 102 ~i~~~d~~~~~~~~l~~~~~~~~~-~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~-~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLFDTNEETAS-LDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI-AVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp EEEEEETTTTEEEEEECCTTCCTT-CEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE-ESCSCCBTTEEESSCCGGG
T ss_pred EEEEEECCCCceEEccCCcccccC-CcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE-EeccCCCCCeEcccchhhh
Confidence 478999998877665555555555 9999999999985 679999999987 5432 212222222
Q ss_pred ----EeEEEEeeCCCEEEEee---------------------------------CCCcEEEEecCCCceeEEEe---cCC
Q psy6446 66 ----IKHVQFFKNNTRLISCA---------------------------------EDKTVRLWDVSASAEVQKLE---FGA 105 (134)
Q Consensus 66 ----v~~~~~~~~~~~l~~~~---------------------------------~d~~i~~~d~~~~~~~~~~~---~~~ 105 (134)
+..+.|+||+++|++++ .+..|.+||+.+++...... +..
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 48999999999999887 34679999998887654332 335
Q ss_pred CCeEEEEccCCcEEEEe-cCC-----eEEEEeCCC
Q psy6446 106 VPNSLEISRDGTTITVT-HGS-----CVTFLDANS 134 (134)
Q Consensus 106 ~v~~~~~~~~~~~l~~~-~~~-----~i~i~d~~t 134 (134)
.+..++|+|||+.++.+ .++ .|.+||+.+
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC
Confidence 67899999999988764 343 899999764
No 145
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=6.8e-18 Score=112.53 Aligned_cols=118 Identities=14% Similarity=0.129 Sum_probs=88.4
Q ss_pred CeeEeecCCCceeeEEeeCCC---ceeeEEEccCCcEEEEecC---------CCeEEEEECCCCCCCC-eEEeCCCCCEe
Q psy6446 1 MGTVWDAVSGEELHSFQHPHI---VKSSVHFATDSYRLATGSN---------DKNIRIYDLNKPDAEP-TVYRGHSSGIK 67 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~---------d~~v~i~~~~~~~~~~-~~~~~~~~~v~ 67 (134)
+|++||+.+++....+.++.. .+.+++|+|||++|++++. ++.+++||+.++.... ..+ ...+.
T Consensus 37 ~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~ 113 (719)
T 1z68_A 37 NIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQ 113 (719)
T ss_dssp CEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBC
T ss_pred CEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Ccccc
Confidence 588999999998877765433 1344999999999998876 6899999998765310 111 25688
Q ss_pred EEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecC-------------------CCCeEEEEccCCcEEEEe
Q psy6446 68 HVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG-------------------AVPNSLEISRDGTTITVT 122 (134)
Q Consensus 68 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~ 122 (134)
.++|+|||+.|+.+. ++.|++||+.+++........ ....+++|+|||+.|+.+
T Consensus 114 ~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~ 186 (719)
T 1z68_A 114 YLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYA 186 (719)
T ss_dssp CEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEE
T ss_pred cceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEE
Confidence 999999999999875 779999999887765432211 112589999999998865
No 146
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.76 E-value=1.5e-16 Score=103.58 Aligned_cols=132 Identities=9% Similarity=0.089 Sum_probs=103.1
Q ss_pred CeeEeec--CCCceeeEEeeCCCceeeEEEcc----CCcEEEEecC-CCeEEEEECCCCCCCCeEEeC----------C-
Q psy6446 1 MGTVWDA--VSGEELHSFQHPHIVKSSVHFAT----DSYRLATGSN-DKNIRIYDLNKPDAEPTVYRG----------H- 62 (134)
Q Consensus 1 ~i~v~d~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~----------~- 62 (134)
+|++||+ .+++++..+........ ++|+| +|+++++++. ++.|.+||..+.+.. ..+.. |
T Consensus 201 ~V~v~D~~~~t~~~~~~i~~g~~p~~-va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~-~~i~~~g~~~~~~~~~~ 278 (543)
T 1nir_A 201 RIDMIDLWAKEPTKVAEIKIGIEARS-VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK-QIVSTRGMTVDTQTYHP 278 (543)
T ss_dssp EEEEEETTSSSCEEEEEEECCSEEEE-EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE-EEEECCEECSSSCCEES
T ss_pred eEEEEECcCCCCcEEEEEecCCCcce-EEeCCCcCCCCCEEEEEEccCCeEEEEeccccccc-eeecccCcccCcccccc
Confidence 4789999 88999988886666655 99999 9999999874 899999999876543 33332 2
Q ss_pred CCCEeEEEEeeCCCE-EEEeeCCCcEEEEecCCCceeE--EEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCCC
Q psy6446 63 SSGIKHVQFFKNNTR-LISCAEDKTVRLWDVSASAEVQ--KLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDANS 134 (134)
Q Consensus 63 ~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~t 134 (134)
...+..+.++|++.. +++...++.|.+||+.+.+.+. .+.....+..+.|+|+|++++++ .+++|.+||+++
T Consensus 279 ~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 279 EPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp CCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC
Confidence 236889999997665 5567778999999998876544 45556678899999999977654 469999999864
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=1.6e-16 Score=95.28 Aligned_cols=129 Identities=9% Similarity=0.003 Sum_probs=90.7
Q ss_pred eeEeecCC-CceeeEEeeC-CCceeeEEEccCCcEEEEec--CCCeEEE--EECCCCCCCCeEEeCCCCCEeEEEEeeCC
Q psy6446 2 GTVWDAVS-GEELHSFQHP-HIVKSSVHFATDSYRLATGS--NDKNIRI--YDLNKPDAEPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~--~d~~v~i--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 75 (134)
|++||+.+ ++........ ...+.+++|+|+++.|++++ .++...+ ++..++. ...+.. ...+..++|+|++
T Consensus 64 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~--~~~~~~-~~~~~~~~~spdg 140 (297)
T 2ojh_A 64 LYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT--PRLMTK-NLPSYWHGWSPDG 140 (297)
T ss_dssp EEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC--CEECCS-SSSEEEEEECTTS
T ss_pred EEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc--eEEeec-CCCccceEECCCC
Confidence 78999998 7776655533 34455599999999999988 3344455 4544433 333333 3458999999999
Q ss_pred CEEE-EeeCCCcEEEEecC--CCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 76 TRLI-SCAEDKTVRLWDVS--ASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~-~~~~d~~i~~~d~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
+.++ ++..++.+.+|++. +++......+...+.+++|+|+++.++.+ .++.+.+|++.
T Consensus 141 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 141 KSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 9887 77788989999864 34443333356678999999999987754 36788888753
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.72 E-value=1.1e-15 Score=93.78 Aligned_cols=126 Identities=10% Similarity=0.118 Sum_probs=92.7
Q ss_pred eeEeecCCCce---eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC----------------
Q psy6446 2 GTVWDAVSGEE---LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH---------------- 62 (134)
Q Consensus 2 i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~---------------- 62 (134)
|.+||+.+++. +..+.++..+.. ++|+|+++ +++++. .+.+||+.+++.. ..+..+
T Consensus 127 i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~s~dg~-l~~~~~--~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 201 (349)
T 1jmx_B 127 LEVFSTADGLEAKPVRTFPMPRQVYL-MRAADDGS-LYVAGP--DIYKMDVKTGKYT-VALPLRNWNRKGYSAPDVLYFW 201 (349)
T ss_dssp EEEEEGGGGGGBCCSEEEECCSSCCC-EEECTTSC-EEEESS--SEEEECTTTCCEE-EEECSTTCCCTTBCCCBCCCCC
T ss_pred EEEEECCCccccceeeeccCCCcccc-eeECCCCc-EEEccC--cEEEEeCCCCcee-ccccccccCCccccCccceeee
Confidence 78999988543 344555554444 99999999 666544 4999998775422 111111
Q ss_pred ----------------------------------------------------CCCEeEEEEee-CCCEEEEeeCCCcEEE
Q psy6446 63 ----------------------------------------------------SSGIKHVQFFK-NNTRLISCAEDKTVRL 89 (134)
Q Consensus 63 ----------------------------------------------------~~~v~~~~~~~-~~~~l~~~~~d~~i~~ 89 (134)
...+..++++| ++++++++ ++.|.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~ 279 (349)
T 1jmx_B 202 PHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAK 279 (349)
T ss_dssp CCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEE
T ss_pred cCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEE
Confidence 11345677889 99998887 789999
Q ss_pred EecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 90 WDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 90 ~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
||+.+++....+.....+.+++|+|++++++++ .++.|.+||+++
T Consensus 280 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 280 YDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred EECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 999999988888777778899999999877665 579999999864
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.71 E-value=2e-16 Score=105.80 Aligned_cols=110 Identities=18% Similarity=0.216 Sum_probs=88.1
Q ss_pred eeeEEEccCCcEEEEecC-CC-----eEEEEECCCCCCCCeEEeCCCC------------------------CEeEEEEe
Q psy6446 23 KSSVHFATDSYRLATGSN-DK-----NIRIYDLNKPDAEPTVYRGHSS------------------------GIKHVQFF 72 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~-d~-----~v~i~~~~~~~~~~~~~~~~~~------------------------~v~~~~~~ 72 (134)
+..++|+|||+.|++++. |+ .|++||+.++... .....+.. .+..++|+
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR-LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE-EEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee-EccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 445999999999999988 88 8999999886532 33333322 37899999
Q ss_pred eCCCEEEEeeCCCcEEEEecCCC---ceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 73 KNNTRLISCAEDKTVRLWDVSAS---AEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 73 ~~~~~l~~~~~d~~i~~~d~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
||+++|++++. +.|.+||+.++ +......+...+..++|+|||++|+.+.++.|++||+.+
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~ 181 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLAS 181 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTT
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCC
Confidence 99999998886 89999999987 544433455778999999999999988888999999853
No 150
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.70 E-value=2e-15 Score=92.38 Aligned_cols=131 Identities=15% Similarity=0.215 Sum_probs=90.5
Q ss_pred eeEeecC---CCceeeEEeeCCCceeeEEEccCCcEEEEec-CCCeEEEEECCCCCCCCe----EEeC-CCCCEeEEEEe
Q psy6446 2 GTVWDAV---SGEELHSFQHPHIVKSSVHFATDSYRLATGS-NDKNIRIYDLNKPDAEPT----VYRG-HSSGIKHVQFF 72 (134)
Q Consensus 2 i~v~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~----~~~~-~~~~v~~~~~~ 72 (134)
|.+||+. +++.+..+.....+.. ++|+|+++.+++++ .++.+.+||+.+...... .... ....+..++|+
T Consensus 108 i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (343)
T 1ri6_A 108 VSVTRLEDGLPVGVVDVVEGLDGCHS-ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH 186 (343)
T ss_dssp EEEEEEETTEEEEEEEEECCCTTBCC-CEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEEC
T ss_pred EEEEECCCCccccccccccCCCCceE-EEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEEC
Confidence 7899984 3444555554444444 99999999888776 889999999986232211 1222 34578899999
Q ss_pred eCCCEEEEee-CCCcEEEEecCC--Cce--eEEEe-c------CCCCeEEEEccCCcEEEE-e-cCCeEEEEeCC
Q psy6446 73 KNNTRLISCA-EDKTVRLWDVSA--SAE--VQKLE-F------GAVPNSLEISRDGTTITV-T-HGSCVTFLDAN 133 (134)
Q Consensus 73 ~~~~~l~~~~-~d~~i~~~d~~~--~~~--~~~~~-~------~~~v~~~~~~~~~~~l~~-~-~~~~i~i~d~~ 133 (134)
|++++++.++ .++.+.+||+.. ++. ..... . ...+..++|+|+++++++ + .++.|.+||++
T Consensus 187 pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 187 PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 9999776554 789999999953 332 22222 1 123457999999987774 4 57999999985
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.70 E-value=5.8e-15 Score=90.93 Aligned_cols=131 Identities=15% Similarity=0.135 Sum_probs=90.0
Q ss_pred eeEeecCCCce--eeEEe-eCCCceeeEEEccCCcEEEEec-CCCeEEEEECCCCCCCCe--EEeC---------CCCCE
Q psy6446 2 GTVWDAVSGEE--LHSFQ-HPHIVKSSVHFATDSYRLATGS-NDKNIRIYDLNKPDAEPT--VYRG---------HSSGI 66 (134)
Q Consensus 2 i~v~d~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~--~~~~---------~~~~v 66 (134)
|++||+.+++. +..+. +...+.. ++|+|++++|++++ .++.+.+|++........ .... ....+
T Consensus 65 v~~~~~~~g~~~~~~~~~~~~~~p~~-~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~ 143 (347)
T 3hfq_A 65 IAAWQIDGQTAHKLNTVVAPGTPPAY-VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHI 143 (347)
T ss_dssp EEEEEEETTEEEEEEEEEEESCCCSE-EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCE
T ss_pred EEEEEecCCcEEEeeeeecCCCCCEE-EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCc
Confidence 78999977663 33433 4444445 99999999888877 679999999964322211 1111 11247
Q ss_pred eEEEEeeCCCEEEEeeCCCcEEEEecC-CCceeEE--Ee--cCCCCeEEEEccCCcEEEE-e-cCCeEEEEeCC
Q psy6446 67 KHVQFFKNNTRLISCAEDKTVRLWDVS-ASAEVQK--LE--FGAVPNSLEISRDGTTITV-T-HGSCVTFLDAN 133 (134)
Q Consensus 67 ~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~~~--~~--~~~~v~~~~~~~~~~~l~~-~-~~~~i~i~d~~ 133 (134)
.+++|+|+++.+++...++.+.+|++. +++.... +. ....+..++|+|+|+++++ + .++.|.+|++.
T Consensus 144 ~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 144 HYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred eEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 889999999955666678899999998 4543322 12 2345778999999997665 3 46899999864
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.70 E-value=5.6e-16 Score=107.17 Aligned_cols=130 Identities=12% Similarity=0.070 Sum_probs=102.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEE-EEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIR-IYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~-i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.+|+..+++......+....+..+.|+ +|+.|+.++.++.+. +|++..+.. ..+.+|...+..++|+|++++|++
T Consensus 319 i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~--~~l~~~~~~~~~~~~SpDG~~la~ 395 (1045)
T 1k32_A 319 AFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA--EKFEENLGNVFAMGVDRNGKFAVV 395 (1045)
T ss_dssp EEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE--EECCCCCCSEEEEEECTTSSEEEE
T ss_pred EEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc--eEecCCccceeeeEECCCCCEEEE
Confidence 6788887776554323444244559999 999999988888888 899876542 233477788999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEE-ecCCCCeEEEEccCCcEEEEe-cC----------CeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKL-EFGAVPNSLEISRDGTTITVT-HG----------SCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~----------~~i~i~d~~t 134 (134)
++.++.+++||+.+++..... .+...+..++|+|||++++.+ .+ +.|++||+.+
T Consensus 396 ~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 396 ANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred ECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 999999999999999887776 356778999999999988764 32 4899999863
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.69 E-value=7.5e-16 Score=106.52 Aligned_cols=128 Identities=10% Similarity=0.008 Sum_probs=96.4
Q ss_pred ee-EeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GT-VWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~-v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+. +||+.+++..... .+...+..++|+|+|+.|++++.++.+++||+.++.. .....+|.+.+..++|+||+++|++
T Consensus 360 l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~-~~~~~~~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 360 FLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP-TVIERSREAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp EEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-EEEEECSSSCCCCEEECTTSCEEEE
T ss_pred eEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce-EEeccCCCCCccceEECCCCCeEEE
Confidence 44 7788776654333 4434455599999999999999999999999987653 3445588889999999999999988
Q ss_pred eeCCC----------cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 81 CAEDK----------TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 81 ~~~d~----------~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
++.++ .|++||+.+++......+...+..++|+|+|++++.. .++....|+
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred EecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 77644 8999999987733322345667889999999988765 445555565
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=2.6e-16 Score=104.88 Aligned_cols=130 Identities=12% Similarity=0.042 Sum_probs=92.9
Q ss_pred eeEeecCCCceeeEEee---CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCC-------------
Q psy6446 2 GTVWDAVSGEELHSFQH---PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSG------------- 65 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~------------- 65 (134)
+++||+.+++. ..+.. ....+..++|+|||+.|+.++. +.|++|++.++... .....+...
T Consensus 93 i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~-~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 93 YVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI-RVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp EEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE-EEECCCBTTTEEEEECCHHHHH
T ss_pred EEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE-EEecCCCCCceECcccceeEEE
Confidence 56999998876 33332 2222444999999999999876 79999999876543 333333332
Q ss_pred -----EeEEEEeeCCCEEEEeeCCC----------------------------------cEEEEecCCCceeEEEec---
Q psy6446 66 -----IKHVQFFKNNTRLISCAEDK----------------------------------TVRLWDVSASAEVQKLEF--- 103 (134)
Q Consensus 66 -----v~~~~~~~~~~~l~~~~~d~----------------------------------~i~~~d~~~~~~~~~~~~--- 103 (134)
+..++|+||++.|+.++.++ .|.+||+.+++....+..
T Consensus 170 e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~ 249 (723)
T 1xfd_A 170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD 249 (723)
T ss_dssp TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC
T ss_pred EeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc
Confidence 37899999999999876543 789999988876454442
Q ss_pred ----CCCCeEEEEccCCcEEEEe-c----CCeEEEEeCCC
Q psy6446 104 ----GAVPNSLEISRDGTTITVT-H----GSCVTFLDANS 134 (134)
Q Consensus 104 ----~~~v~~~~~~~~~~~l~~~-~----~~~i~i~d~~t 134 (134)
...+..++|+|||++++.. . +..|.+||+.+
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 3457889999999988654 2 25899999753
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.67 E-value=5.1e-15 Score=91.19 Aligned_cols=129 Identities=9% Similarity=0.085 Sum_probs=87.8
Q ss_pred eEeecCCCceee--EEeeCCCceeeEEEccCCcEEEEecC---CCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeCCC
Q psy6446 3 TVWDAVSGEELH--SFQHPHIVKSSVHFATDSYRLATGSN---DKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 3 ~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~---d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
..||..+++... ...+...... ++|+|+|+ |++++. ++.|.+|++..+.. .......+...+..++|+|+++
T Consensus 21 ~~~d~~tg~~~~~~~~~~~~~p~~-~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 21 GTLDTTAKTLTNDGLLAATQNPTY-LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQ 98 (347)
T ss_dssp EEEETTTTEEEEEEEEEECSCCCC-EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTT
T ss_pred EEEcCCCCeEEEeeeeeccCCcce-EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCC
Confidence 344555666543 2334555555 99999999 555543 68999999965432 1222344667889999999999
Q ss_pred EEEEee-CCCcEEEEecCC-Cc--eeEEEecC----------CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 77 RLISCA-EDKTVRLWDVSA-SA--EVQKLEFG----------AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~-~d~~i~~~d~~~-~~--~~~~~~~~----------~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+|++++ .++.+.+|++.. +. .+..+... ..+.+++|+|+|+++++. .++.|.+||+.
T Consensus 99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 888877 678999999963 33 23333221 136789999999955555 46899999975
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=1.4e-14 Score=89.74 Aligned_cols=110 Identities=11% Similarity=0.143 Sum_probs=78.8
Q ss_pred eeeEEEccCCcEEEEec-CCCeEEEEECCCCCCC-CeEE---eCCCCCEeEEEEeeCCCEEEEeeCC--CcEEEEecC--
Q psy6446 23 KSSVHFATDSYRLATGS-NDKNIRIYDLNKPDAE-PTVY---RGHSSGIKHVQFFKNNTRLISCAED--KTVRLWDVS-- 93 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~-~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~~~d~~-- 93 (134)
...++|+|+|+++++++ .++.|.+|++.++... .... ..+......++|+|++++|+++..+ +.+.+|++.
T Consensus 213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~ 292 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET 292 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT
T ss_pred CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC
Confidence 34499999999887766 6899999999854311 1111 1233456899999999998766654 889999985
Q ss_pred CCc--eeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeC
Q psy6446 94 ASA--EVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDA 132 (134)
Q Consensus 94 ~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~ 132 (134)
+++ .+..+.....+..++|+|+|++|+++ .++.|.+|++
T Consensus 293 ~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 293 NGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp TCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 344 33334445578899999999988765 3589999654
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.66 E-value=7.5e-16 Score=102.59 Aligned_cols=132 Identities=9% Similarity=0.007 Sum_probs=93.3
Q ss_pred CeeEeecCC-----CceeeEEeeCCC-c-------------eeeEEEccCCcEEEEec----------------------
Q psy6446 1 MGTVWDAVS-----GEELHSFQHPHI-V-------------KSSVHFATDSYRLATGS---------------------- 39 (134)
Q Consensus 1 ~i~v~d~~~-----~~~~~~~~~~~~-~-------------~~~~~~~~~~~~l~~~~---------------------- 39 (134)
+|++||+.+ ++.......... + ..++.|+|||+.|++++
T Consensus 142 ~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~ 221 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESK 221 (706)
T ss_dssp EEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEE
T ss_pred eEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceE
Confidence 378999988 776654442222 2 24599999999999887
Q ss_pred -----------CCCeEEEEECCCCCCCCeE-EeCCCCCEeEEEEeeCCCEEEEeeCCC-----cEEEEecCCCceeEEEe
Q psy6446 40 -----------NDKNIRIYDLNKPDAEPTV-YRGHSSGIKHVQFFKNNTRLISCAEDK-----TVRLWDVSASAEVQKLE 102 (134)
Q Consensus 40 -----------~d~~v~i~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~ 102 (134)
.+..|++||+.++...... ...|...+..++|+||++.|++++.++ .|.+||..+++....+.
T Consensus 222 ~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 222 PLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE
T ss_pred EeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE
Confidence 4467999999875422111 124567789999999999999877665 89999999884333332
Q ss_pred -c--CC---CCeEEEEcc--CCcEEEEe-cCCeEEEEeC
Q psy6446 103 -F--GA---VPNSLEISR--DGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 103 -~--~~---~v~~~~~~~--~~~~l~~~-~~~~i~i~d~ 132 (134)
. .. .+..+.|+| +|++++++ .++.+++|++
T Consensus 302 ~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~ 340 (706)
T 2z3z_A 302 VETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLY 340 (706)
T ss_dssp EEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEE
T ss_pred EccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEE
Confidence 2 21 246789999 99988776 5677777764
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.66 E-value=1.4e-14 Score=90.08 Aligned_cols=132 Identities=12% Similarity=0.116 Sum_probs=92.4
Q ss_pred CeeEeecC-CCceeeEEeeC--CCceeeEEEccCCcE--EEEec-------------CCCeEEEEECCCCCCCCeEEe--
Q psy6446 1 MGTVWDAV-SGEELHSFQHP--HIVKSSVHFATDSYR--LATGS-------------NDKNIRIYDLNKPDAEPTVYR-- 60 (134)
Q Consensus 1 ~i~v~d~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~--l~~~~-------------~d~~v~i~~~~~~~~~~~~~~-- 60 (134)
+|.+||+. +++......+. ..... ++|+|+|+. +++++ .++.+.+|++...........
T Consensus 61 ~v~~~~~~~~g~~~~~~~~~~~g~~~~-~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~ 139 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEASHPIGGHPRA-NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNY 139 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEECCSSGGG-GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEE
T ss_pred eEEEEEECCCCCEEEeeEeecCCCCcc-EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeE
Confidence 37899987 78765544422 33344 899999994 45554 688999999974332222222
Q ss_pred --CCCCCEeEEEEeeCCCEEEEeeC-CCcEEEEecC-CCcee--EEEe---cCCCCeEEEEccCCcEEEEe--cCCeEEE
Q psy6446 61 --GHSSGIKHVQFFKNNTRLISCAE-DKTVRLWDVS-ASAEV--QKLE---FGAVPNSLEISRDGTTITVT--HGSCVTF 129 (134)
Q Consensus 61 --~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~-~~~~~--~~~~---~~~~v~~~~~~~~~~~l~~~--~~~~i~i 129 (134)
.+...+..++|+|++++++++.. ++.|.+||+. +++.. ..+. +...+..++|+|+|++++++ .++.|.+
T Consensus 140 ~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v 219 (365)
T 1jof_A 140 EYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICE 219 (365)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEE
Confidence 24567999999999998887654 6789999998 66643 2233 14568899999999988764 3589999
Q ss_pred EeCC
Q psy6446 130 LDAN 133 (134)
Q Consensus 130 ~d~~ 133 (134)
|++.
T Consensus 220 ~~~~ 223 (365)
T 1jof_A 220 YVID 223 (365)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8753
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.64 E-value=5.1e-14 Score=87.19 Aligned_cols=110 Identities=14% Similarity=0.162 Sum_probs=79.2
Q ss_pred eeEEEccCCcEEEEe-cCCCeEEEEECCCCCC------C------CeEEeCCCCCEeEEEEeeCCCEEEEee-CCCcEEE
Q psy6446 24 SSVHFATDSYRLATG-SNDKNIRIYDLNKPDA------E------PTVYRGHSSGIKHVQFFKNNTRLISCA-EDKTVRL 89 (134)
Q Consensus 24 ~~~~~~~~~~~l~~~-~~d~~v~i~~~~~~~~------~------~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~ 89 (134)
.+++|+|+|++++++ ..++.+.+|++..... + ..........+..++|+|++++++.++ .++.|.+
T Consensus 158 ~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 237 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA 237 (361)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEE
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE
Confidence 459999999976555 4578999999876442 1 111233455688999999999887776 5889999
Q ss_pred EecCCCceeE--EEec----CCCCeEEEEccCCcEEEEe-c--CCeEEEEeCC
Q psy6446 90 WDVSASAEVQ--KLEF----GAVPNSLEISRDGTTITVT-H--GSCVTFLDAN 133 (134)
Q Consensus 90 ~d~~~~~~~~--~~~~----~~~v~~~~~~~~~~~l~~~-~--~~~i~i~d~~ 133 (134)
||+.+++... .+.. ......++|+|+|++++++ . ++.|.+|++.
T Consensus 238 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 238 FRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 9998765432 2221 1335699999999988654 3 4899999974
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.62 E-value=2.3e-15 Score=98.48 Aligned_cols=124 Identities=10% Similarity=0.010 Sum_probs=93.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCC--eEEEEECCCCCCCCeEEeCCCCCEeEEE--------E
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDK--NIRIYDLNKPDAEPTVYRGHSSGIKHVQ--------F 71 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~--------~ 71 (134)
|++||+.+++.. .+..+......++|+|||+.|+++..++ .|++||+.++... .+.+|...+..+. |
T Consensus 177 i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3o4h_A 177 LFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE--DLELPSKDFSSYRPTAITWLGY 253 (582)
T ss_dssp EEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE--ECCCSCSHHHHHCCSEEEEEEE
T ss_pred EEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE--EccCCCcChhhhhhccccceeE
Confidence 789999888866 4443334445599999999999888888 8999999876543 5566766677677 9
Q ss_pred eeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cC---CeEEEEeCC
Q psy6446 72 FKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HG---SCVTFLDAN 133 (134)
Q Consensus 72 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~---~~i~i~d~~ 133 (134)
+||+..+++++.++.+++|++ ++... .....+.+++|+ +++++++. .+ ..+.+||..
T Consensus 254 spdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 254 LPDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp CTTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred cCCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 999988889999999999999 55443 234567889999 88877754 33 467777754
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.61 E-value=1.3e-15 Score=101.67 Aligned_cols=106 Identities=14% Similarity=0.151 Sum_probs=82.6
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCC---CEeEEEEeeCCCEEEEeeC---------CCcEEEEecC
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSS---GIKHVQFFKNNTRLISCAE---------DKTVRLWDVS 93 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~ 93 (134)
+.|+|+++++++ +.|+.|++||+.++... ..+..+.. .+..++|+|||++|+.++. ++.+++||+.
T Consensus 21 ~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 21 PNWISGQEYLHQ-SADNNIVLYNIETGQSY-TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CEESSSSEEEEE-CTTSCEEEEESSSCCEE-EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred cEECCCCeEEEE-cCCCCEEEEEcCCCcEE-EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 899999965554 46899999999886532 33333332 3899999999999998776 6899999999
Q ss_pred CCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 94 ASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 94 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+++..........+..++|+|||+.|+.+.++.|++||+.
T Consensus 99 ~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~ 138 (719)
T 1z68_A 99 NGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRP 138 (719)
T ss_dssp TTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESST
T ss_pred CCccccceecCcccccceECCCCCEEEEEECCeEEEEeCC
Confidence 8876211112356889999999999998889999999975
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.61 E-value=8e-15 Score=98.41 Aligned_cols=119 Identities=15% Similarity=0.066 Sum_probs=88.1
Q ss_pred CeeEeecCCCceeeEEeeCC-Cce----eeEEEccCCcEEEEecCC---------CeEEEEECCCCCCCCeEEeCCCCCE
Q psy6446 1 MGTVWDAVSGEELHSFQHPH-IVK----SSVHFATDSYRLATGSND---------KNIRIYDLNKPDAEPTVYRGHSSGI 66 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~l~~~~~d---------~~v~i~~~~~~~~~~~~~~~~~~~v 66 (134)
+|++||+.+++....+.++. ... ..+.|||||+.|+.++.+ +.+.+||+.++... .+..+.+.+
T Consensus 37 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~--~l~~~~~~~ 114 (740)
T 4a5s_A 37 NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--TEERIPNNT 114 (740)
T ss_dssp EEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC--CSSCCCTTE
T ss_pred cEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE--EcccCCCcc
Confidence 47899999999877777433 221 227889999999998875 56779999986532 245677889
Q ss_pred eEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecC-------------------CCCeEEEEccCCcEEEEe
Q psy6446 67 KHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG-------------------AVPNSLEISRDGTTITVT 122 (134)
Q Consensus 67 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~ 122 (134)
...+|||||+.|+.+. ++.|.+||..+++..+..... .....+.|||||+.|+..
T Consensus 115 ~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 115 QWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp EEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred eeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 9999999999998874 678999999887754322111 112358999999988864
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.60 E-value=6.2e-13 Score=82.66 Aligned_cols=132 Identities=9% Similarity=0.099 Sum_probs=89.8
Q ss_pred eeEeecC-CCceeeEEee----CCCceeeEEEccCCcEEEEec-CCCeEEEEECC-CCCCCC-eEEe--CCCCCEeEEEE
Q psy6446 2 GTVWDAV-SGEELHSFQH----PHIVKSSVHFATDSYRLATGS-NDKNIRIYDLN-KPDAEP-TVYR--GHSSGIKHVQF 71 (134)
Q Consensus 2 i~v~d~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~-~d~~v~i~~~~-~~~~~~-~~~~--~~~~~v~~~~~ 71 (134)
+.+|++. +++....+.. .......++|+|+|++++++. .++.|++|++. +++... .... .+...+..++|
T Consensus 121 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~ 200 (365)
T 1jof_A 121 GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAM 200 (365)
T ss_dssp EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEE
T ss_pred EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEE
Confidence 6789987 4665544431 233455599999999888765 46799999998 543211 1222 23567899999
Q ss_pred eeCCCEEEEeeC-CCcEEEEecC--CCceeE---EEec-C------C-------CCeEEE-EccCCcEEEEe-c-CC---
Q psy6446 72 FKNNTRLISCAE-DKTVRLWDVS--ASAEVQ---KLEF-G------A-------VPNSLE-ISRDGTTITVT-H-GS--- 125 (134)
Q Consensus 72 ~~~~~~l~~~~~-d~~i~~~d~~--~~~~~~---~~~~-~------~-------~v~~~~-~~~~~~~l~~~-~-~~--- 125 (134)
+|+++++++++. ++.+.+|++. +++... .+.. . . .+..++ |+|||++++++ . ++
T Consensus 201 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~ 280 (365)
T 1jof_A 201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFEL 280 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTS
T ss_pred CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCC
Confidence 999999887765 6789999765 455422 2221 1 1 367899 99999987764 2 23
Q ss_pred --eEEEEeCC
Q psy6446 126 --CVTFLDAN 133 (134)
Q Consensus 126 --~i~i~d~~ 133 (134)
.|.+|++.
T Consensus 281 ~~~i~v~~~~ 290 (365)
T 1jof_A 281 QGYIAGFKLR 290 (365)
T ss_dssp CCEEEEEEEC
T ss_pred CCeEEEEEEC
Confidence 89999874
No 164
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.60 E-value=5.4e-13 Score=87.32 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=76.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECC--CCCCCCeEEeCCCCCEeEEEEe----eC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLN--KPDAEPTVYRGHSSGIKHVQFF----KN 74 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~--~~~~~~~~~~~~~~~v~~~~~~----~~ 74 (134)
+|.++|..+++.+..+........ +.|+|+|+++++++.++.|.+||+. +.+.. ..+.. ......++|+ ||
T Consensus 178 ~V~viD~~t~~v~~~i~~g~~p~~-v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v-~~i~~-G~~P~~ia~s~~~~pD 254 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGYAVHI-SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV-AEIKI-GSEARSIETSKMEGWE 254 (567)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEE-EEECTTSCEEEEEETTSEEEEEETTSSSCCEE-EEEEC-CSEEEEEEECCSTTCT
T ss_pred eEEEEECCCCeEEEEEeCCCCccc-eEECCCCCEEEEEcCCCeEEEEECCCCCCcEe-EEEec-CCCCceeEEccccCCC
Confidence 378999999999999885544444 9999999999999999999999996 44332 33332 3456899999 69
Q ss_pred CCEEEEeeC-CCcEEEEecCCCceeEEEe
Q psy6446 75 NTRLISCAE-DKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 75 ~~~l~~~~~-d~~i~~~d~~~~~~~~~~~ 102 (134)
+++++++.. ++.+.++|..+.+.+..+.
T Consensus 255 Gk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 255 DKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp TTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 999887665 5889999988877766554
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.58 E-value=1.2e-14 Score=97.60 Aligned_cols=106 Identities=8% Similarity=0.101 Sum_probs=84.9
Q ss_pred eEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCC-----EeEEEEeeCCCEEEEeeCC---------CcEEEE
Q psy6446 25 SVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSG-----IKHVQFFKNNTRLISCAED---------KTVRLW 90 (134)
Q Consensus 25 ~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------~~i~~~ 90 (134)
.+.|+|++++++++ |+.|++||+.++... ..+.+|... ...++||||+++|+.++.+ +.+.+|
T Consensus 21 ~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ--ENNILVFNAEYGNSS-VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CEEECSSSEEEEEE--TTEEEEEETTTCCEE-EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCcEEEEc--CCcEEEEECCCCceE-EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 39999999888886 899999999987643 445555432 2448899999999988775 556799
Q ss_pred ecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 91 DVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 91 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
|+.+++......+...+..++|||||+.|+.+.++.|++||+.
T Consensus 98 d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~ 140 (740)
T 4a5s_A 98 DLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEP 140 (740)
T ss_dssp ETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESST
T ss_pred ECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECC
Confidence 9999886554334667899999999999998889999999975
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.58 E-value=2.8e-12 Score=78.79 Aligned_cols=132 Identities=13% Similarity=0.104 Sum_probs=96.5
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEE---------eCCCCCEeEEE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVY---------RGHSSGIKHVQ 70 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~---------~~~~~~v~~~~ 70 (134)
+|.+||..+++.+..+. ..-.....++++|+|+.+++...++.|++|+..........+ .++-.....++
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia 149 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVA 149 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEE
Confidence 37899998898876665 222233449999999988888889999999986542233333 23344689999
Q ss_pred Eee-CCCEEEEee-CCCcEEEEecCCCceeEEEecC-----------CCCeEEEEccC-CcEEEEe-cCCeEEEEeCC
Q psy6446 71 FFK-NNTRLISCA-EDKTVRLWDVSASAEVQKLEFG-----------AVPNSLEISRD-GTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 71 ~~~-~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~-----------~~v~~~~~~~~-~~~l~~~-~~~~i~i~d~~ 133 (134)
++| +++.+++.+ .++.|.+|| .+++....+... ..+..++++|+ +.++++. .++.|.+||.+
T Consensus 150 ~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 150 VEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp ECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 999 788777776 689999999 567766666421 23689999998 6666665 56899999975
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.58 E-value=8.4e-13 Score=79.36 Aligned_cols=128 Identities=13% Similarity=0.157 Sum_probs=93.3
Q ss_pred eeEeecCCCceeeEEee--CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC--CCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQH--PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH--SSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~ 77 (134)
|.+||. +++.+..+.. .......++++++++.+++...++.|++|+... . ....+..+ ...+..++++++++.
T Consensus 144 i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~~~~g~~~~p~~i~~d~~G~l 220 (286)
T 1q7f_A 144 VIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-Q-YLRQIGGEGITNYPIGVGINSNGEI 220 (286)
T ss_dssp EEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-C-EEEEESCTTTSCSEEEEEECTTCCE
T ss_pred EEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-C-EEEEEccCCccCCCcEEEECCCCCE
Confidence 677885 4666666642 222344599999999888878889999999754 2 22233322 357899999999988
Q ss_pred EEEeeCCC-cEEEEecCCCceeEEEecC---CCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 78 LISCAEDK-TVRLWDVSASAEVQKLEFG---AVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 78 l~~~~~d~-~i~~~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+++...++ .|.+||. +++.+..+... ..+.+++++|+|++++++.++.|++|++.
T Consensus 221 ~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 221 LIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp EEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred EEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 88887776 9999995 56666666532 23678999999987777778999999974
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.57 E-value=1.4e-13 Score=91.26 Aligned_cols=113 Identities=10% Similarity=0.026 Sum_probs=81.8
Q ss_pred CCceeeEEEccCCcEEEEecCC----------CeEEEEECCCCC----CCCeEEe-CCCCCEeEEEEeeCCCEEEEeeCC
Q psy6446 20 HIVKSSVHFATDSYRLATGSND----------KNIRIYDLNKPD----AEPTVYR-GHSSGIKHVQFFKNNTRLISCAED 84 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~d----------~~v~i~~~~~~~----~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d 84 (134)
......++|+|||+.|++++.+ ..|++|++.+.. .....+. .+...+..++|+|||++|+..+.+
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEEC
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECC
Confidence 3344559999999999988876 589999998721 1223344 555678889999999999877754
Q ss_pred --------CcEEEEecC-CC---ceeEEEec-CCCCeEEEEccCCcEEEEe-cCC--eEEEEeC
Q psy6446 85 --------KTVRLWDVS-AS---AEVQKLEF-GAVPNSLEISRDGTTITVT-HGS--CVTFLDA 132 (134)
Q Consensus 85 --------~~i~~~d~~-~~---~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~--~i~i~d~ 132 (134)
..|.+||+. ++ +....... ...+..+.|+|||++++++ .++ .|.+||+
T Consensus 209 ~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 209 HPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp TTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECT
T ss_pred CCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEEC
Confidence 379999998 56 33333333 5678899999999966665 455 7777775
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.56 E-value=2.5e-13 Score=84.68 Aligned_cols=131 Identities=11% Similarity=0.016 Sum_probs=95.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEE--EeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQ--FFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~ 79 (134)
|.+||+.+++......++........|+|+++.|+.++.++.+++||+.+++.. .....+...+.... ++|+++.++
T Consensus 62 l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 62 YYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN-VVYQVPAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp EEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE-EEEECCTTEEEEEEEEECTTSSEEE
T ss_pred EEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce-eeeechhhcccccceeECCCCCeec
Confidence 678898888877666555444423889999999999999999999999986533 34444555454444 478888887
Q ss_pred Ee----------------------eCCCcEEEEecCCCceeEEEecCCCCeEEEEcc-CCcEEEEe-c------CCeEEE
Q psy6446 80 SC----------------------AEDKTVRLWDVSASAEVQKLEFGAVPNSLEISR-DGTTITVT-H------GSCVTF 129 (134)
Q Consensus 80 ~~----------------------~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~------~~~i~i 129 (134)
.. ..+..|.+||+.+++..........+..+.|+| +|+.++.. . ...|.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~ 220 (388)
T 3pe7_A 141 GIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWL 220 (388)
T ss_dssp EEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEE
T ss_pred cccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEE
Confidence 42 234679999999988766666677789999999 99887754 2 237888
Q ss_pred EeCC
Q psy6446 130 LDAN 133 (134)
Q Consensus 130 ~d~~ 133 (134)
+|+.
T Consensus 221 ~d~~ 224 (388)
T 3pe7_A 221 INED 224 (388)
T ss_dssp EETT
T ss_pred EeCC
Confidence 8764
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.55 E-value=5.2e-13 Score=83.08 Aligned_cols=65 Identities=14% Similarity=0.217 Sum_probs=53.6
Q ss_pred EEEeeCCCEEEEeeC-----------CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 69 VQFFKNNTRLISCAE-----------DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 69 ~~~~~~~~~l~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
++|+|+++.++.... .+.|.+||..+++.+..+.... +.+++|+|+|++++++.++.|.+||+++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t 334 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQ 334 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCC
Confidence 577777777765432 3479999999999999998777 9999999999988877559999999864
No 171
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.55 E-value=1.8e-13 Score=85.65 Aligned_cols=107 Identities=9% Similarity=0.099 Sum_probs=83.2
Q ss_pred EEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCC
Q psy6446 15 SFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 94 (134)
....+. +..++| +++.|+++ .++.|++||+.+... ......|...+.++.+.+. .++++..||.+.+||+.+
T Consensus 84 ~~~lp~--V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~-~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 84 EKEIPD--VIFVCF--HGDQVLVS-TRNALYSLDLEELSE-FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRT 155 (388)
T ss_dssp EEECTT--EEEEEE--ETTEEEEE-ESSEEEEEESSSTTC-EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTT
T ss_pred EeeCCC--eeEEEE--CCCEEEEE-cCCcEEEEEchhhhc-cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccC
Confidence 344555 445999 89999999 889999999987653 3445677788888877654 388899999999999998
Q ss_pred CceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 95 SAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 95 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
++... ....|.+++|+|+| ..+...||.+++|+..
T Consensus 156 ~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 156 KSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp CCEEE---EEESEEEEEECSSE-EEEEETTSCEEEEEEE
T ss_pred Ccccc---ccCCceEEEEcCCc-eEEEEcCCcEEEEcCC
Confidence 77643 34589999999999 4455688999999754
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.54 E-value=1.8e-13 Score=85.16 Aligned_cols=127 Identities=12% Similarity=0.076 Sum_probs=87.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec----------CCCeEEEEECCCCCCCCeEEeC------CCCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS----------NDKNIRIYDLNKPDAEPTVYRG------HSSG 65 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~------~~~~ 65 (134)
|.+||..+++.+..+...... . ++|+|+++++++++ .++.|.+||..+.+.. ..+.. +...
T Consensus 33 v~v~D~~t~~~~~~i~~g~~p-~-i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~-~~i~~~~~~~~~g~~ 109 (361)
T 2oiz_A 33 VHVYDYTNGKFLGMVPTAFNG-H-VQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFE-KEISLPPKRVQGLNY 109 (361)
T ss_dssp EEEEETTTCCEEEEEECCEEE-E-EEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEE-EEEEECTTBCCBCCC
T ss_pred EEEEECCCCeEEEEecCCCCC-c-eEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEE-EEEEcCccccccCCC
Confidence 679999999998888744444 5 99999999999886 3567999999875533 22221 2345
Q ss_pred EeEEEEeeCCCEEEEeeC--CCcEEEEecCCCceeEE-EecCCCCeEEEEccCC--cEEEEecCCeEEEEeC
Q psy6446 66 IKHVQFFKNNTRLISCAE--DKTVRLWDVSASAEVQK-LEFGAVPNSLEISRDG--TTITVTHGSCVTFLDA 132 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~-~~~~~~v~~~~~~~~~--~~l~~~~~~~i~i~d~ 132 (134)
...++++|++++|+++.. ++.|.+||+.+++.+.. +..... ..+.+.|++ .+++.+.||.+.+++.
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 678999999999988764 57899999999988776 443222 224455554 2233345566555554
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.52 E-value=1.6e-13 Score=90.96 Aligned_cols=128 Identities=8% Similarity=0.013 Sum_probs=87.6
Q ss_pred eeEeecCC------CceeeEE-eeCCCceeeEEEccCCcEEEEecCC--------CeEEEEECC-CCC--CCCeEEeCCC
Q psy6446 2 GTVWDAVS------GEELHSF-QHPHIVKSSVHFATDSYRLATGSND--------KNIRIYDLN-KPD--AEPTVYRGHS 63 (134)
Q Consensus 2 i~v~d~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d--------~~v~i~~~~-~~~--~~~~~~~~~~ 63 (134)
|++||+.+ ++..... .+.. ....+.|+|||+.|+.++.+ ..|++||+. ++. .......++.
T Consensus 163 i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAVRELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE 241 (662)
T ss_dssp EEEEETTSTTTTCGGGSEESSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT
T ss_pred EEEEECCCCccccCCceeEEEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC
Confidence 78899887 5554333 3333 34449999999999877644 379999998 441 2333344557
Q ss_pred CCEeEEEEeeCCCEEEEeeCCC--cEEEEecCCCceeEEEecCCC---------CeEEEEccCCcEEEEecCCeEEEE
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDK--TVRLWDVSASAEVQKLEFGAV---------PNSLEISRDGTTITVTHGSCVTFL 130 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~~~~i~i~ 130 (134)
..+..+.|+||++.++++..++ .|.+||..+++.......... +..++|+|++++++++..+.+++|
T Consensus 242 ~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (662)
T 3azo_A 242 EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLG 319 (662)
T ss_dssp BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEE
T ss_pred ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEE
Confidence 8899999999999777777787 566777656654433322211 467899999998887633777777
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.52 E-value=4.7e-12 Score=76.11 Aligned_cols=128 Identities=13% Similarity=0.166 Sum_probs=93.4
Q ss_pred eeEeecCCCceeeEEee-CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe--CCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQH-PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR--GHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l 78 (134)
|.+|| .+++.+..+.. .......++++|+++.+++...++.|.+|+... . ....+. .+...+..++++++++.+
T Consensus 102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-N-VLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp EEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-C-EEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred EEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-C-EEEEeCCCCccCCcEEEEECCCCCEE
Confidence 67888 56777776652 223344599999999888878889999999653 2 222332 344568999999999887
Q ss_pred EEeeCCCcEEEEecCCCceeEEEecC---CCCeEEEEccCCcEEEEe-cCC-eEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEFG---AVPNSLEISRDGTTITVT-HGS-CVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~-~~~-~i~i~d~~ 133 (134)
++...++.|.+||. +++.+..+... ..+..++++++|.++++. .++ .|.+||..
T Consensus 179 v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 179 ISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 77778899999997 45555555432 467899999999888776 454 99999864
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=3.2e-13 Score=84.18 Aligned_cols=130 Identities=12% Similarity=0.100 Sum_probs=85.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCC------CeEEEEECCCCCCCCeEEeCCC--CCEeEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSND------KNIRIYDLNKPDAEPTVYRGHS--SGIKHVQFF 72 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~~--~~v~~~~~~ 72 (134)
|.+||+.+++......+...+.. +.|+| +|+.|+..+.+ ..+.+++..... . ..+..+. ..+....|+
T Consensus 170 l~~~d~~~g~~~~l~~~~~~~~~-~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~-~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 170 LMRVDLKTGESTVILQENQWLGH-PIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-M-RKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEEETTTCCEEEEEEESSCEEE-EEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-C-EESCCCCTTEEEEEEEEC
T ss_pred EEEEECCCCceEEeecCCccccc-cEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-e-EEeeeCCCCcccccceEC
Confidence 67899998877665555555544 99999 99988876653 378888876543 2 2333333 247788999
Q ss_pred eCCCEEEEeeC-CC----cEEEEecCCCceeEEEecCC------CCeEEEEccCCcEEEEe----------cCCeEEEEe
Q psy6446 73 KNNTRLISCAE-DK----TVRLWDVSASAEVQKLEFGA------VPNSLEISRDGTTITVT----------HGSCVTFLD 131 (134)
Q Consensus 73 ~~~~~l~~~~~-d~----~i~~~d~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~----------~~~~i~i~d 131 (134)
||++.|+..+. ++ .|.+||+.+++......... ......|+|+|+.++.. .+..|.+||
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 247 PDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp TTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred CCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 99998765433 22 39999999887544333222 12334799999877642 346899999
Q ss_pred CCC
Q psy6446 132 ANS 134 (134)
Q Consensus 132 ~~t 134 (134)
+++
T Consensus 327 ~~~ 329 (388)
T 3pe7_A 327 MKN 329 (388)
T ss_dssp TTT
T ss_pred ccC
Confidence 863
No 176
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.51 E-value=4.3e-12 Score=77.97 Aligned_cols=130 Identities=16% Similarity=0.137 Sum_probs=94.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCC-----CCEeEEEEeeCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHS-----SGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~ 75 (134)
+|.++|..+++.+..+........ ++++++++..++...++.|.++|..+.+.. ..+.... .....+++ . +
T Consensus 65 ~v~viD~~t~~~~~~i~~~~~p~~-i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~-~~i~~g~~~~~~~~p~~i~~-~-~ 140 (328)
T 3dsm_A 65 VIFAIDINTFKEVGRITGFTSPRY-IHFLSDEKAYVTQIWDYRIFIINPKTYEIT-GYIECPDMDMESGSTEQMVQ-Y-G 140 (328)
T ss_dssp EEEEEETTTCCEEEEEECCSSEEE-EEEEETTEEEEEEBSCSEEEEEETTTTEEE-EEEECTTCCTTTCBCCCEEE-E-T
T ss_pred EEEEEECcccEEEEEcCCCCCCcE-EEEeCCCeEEEEECCCCeEEEEECCCCeEE-EEEEcCCccccCCCcceEEE-E-C
Confidence 378999999999998875555555 999888854444447899999999875432 2222211 14567777 3 4
Q ss_pred CEEEEee--CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec-C----------CeEEEEeCCC
Q psy6446 76 TRLISCA--EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH-G----------SCVTFLDANS 134 (134)
Q Consensus 76 ~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~----------~~i~i~d~~t 134 (134)
..++.+. .++.|.++|..+++....+........+.++|+|++++++. + +.|.++|.++
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred CEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 4554444 48899999999999888888777778999999999777653 3 6899999763
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.49 E-value=2.4e-12 Score=80.26 Aligned_cols=127 Identities=9% Similarity=0.075 Sum_probs=86.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCC------CeEEEEECCCCCCCCeEEeCC--CCCEeEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSND------KNIRIYDLNKPDAEPTVYRGH--SSGIKHVQFF 72 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~--~~~v~~~~~~ 72 (134)
|++||+.+++......+...+.. +.|+| +++.|+..+.+ ..|.+|++..+.. ..+..+ ...+..+.|+
T Consensus 170 l~~~d~~~g~~~~~~~~~~~~~~-~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~s 246 (396)
T 3c5m_A 170 LIKVDIETGELEVIHQDTAWLGH-PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV--RKIKEHAEGESCTHEFWI 246 (396)
T ss_dssp EEEEETTTCCEEEEEEESSCEEE-EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC--EESSCCCTTEEEEEEEEC
T ss_pred EEEEECCCCcEEeeccCCccccc-ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce--eEeeccCCCccccceEEC
Confidence 67899988887666555544444 99999 78877665443 3688888865432 222222 2357889999
Q ss_pred eCCCEEEEeeCC-----CcEEEEecCCCceeEEEecCCCCeEEEEcc-CCcEEEEe-----------------cCCeEEE
Q psy6446 73 KNNTRLISCAED-----KTVRLWDVSASAEVQKLEFGAVPNSLEISR-DGTTITVT-----------------HGSCVTF 129 (134)
Q Consensus 73 ~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-----------------~~~~i~i 129 (134)
|+++.|+..+.+ +.|.+||+.+++......... .. +.|+| +|++++.+ .+..|++
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~ 324 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYV 324 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEE
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEE
Confidence 999988766543 349999998887654433332 23 89999 99987753 2378999
Q ss_pred EeCC
Q psy6446 130 LDAN 133 (134)
Q Consensus 130 ~d~~ 133 (134)
||+.
T Consensus 325 ~d~~ 328 (396)
T 3c5m_A 325 LNTK 328 (396)
T ss_dssp EETT
T ss_pred Eecc
Confidence 9975
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.47 E-value=2.5e-11 Score=74.34 Aligned_cols=131 Identities=11% Similarity=0.025 Sum_probs=89.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC----CeEEEEECCCCCCCCeEEe--CCCCCEeEEEEeeCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND----KNIRIYDLNKPDAEPTVYR--GHSSGIKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~ 75 (134)
|.+||..+++...........+.+++++|+++++++...+ +.|.+||..+.... ..+. .+...+..+.++|++
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~i~~d~~g 146 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-DIIEDLSTAYCIDDMVFDSKG 146 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-EEECSSSSCCCEEEEEECTTS
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-EEEccCccCCcccceEECCCC
Confidence 6788888777655443333344559999999888877666 68999998765422 1222 234568999999999
Q ss_pred CEEEEeeC------CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 76 TRLISCAE------DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
+.+++... .+.|..+|..+++..........+..++|+|+++.+..+ .++.|.+||++
T Consensus 147 ~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 147 GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 87776553 345667776555544333333457889999999866543 46899999873
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.47 E-value=1.8e-11 Score=73.61 Aligned_cols=127 Identities=12% Similarity=0.084 Sum_probs=96.1
Q ss_pred eeEeecCCCceeeEEeeCC-CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC-CCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPH-IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH-SSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~ 79 (134)
|.+||.++|+.+.++..+. .....+.+.|+|+.+++ .++.|..||. +++.. ..+... ...+..+.+.++++.++
T Consensus 17 v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~-W~~~~~~~~~~~~~~~~~dG~~lv 92 (276)
T 3no2_A 17 IAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGREL-WNIAAPAGCEMQTARILPDGNALV 92 (276)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEE-EEEECCTTCEEEEEEECTTSCEEE
T ss_pred EEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEE-EEEcCCCCccccccEECCCCCEEE
Confidence 7899998999999998544 33444999999998883 4678999998 55533 344443 34688899999999999
Q ss_pred EeeC-CCcEEEEecCCCceeEEEecC-------CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAE-DKTVRLWDVSASAEVQKLEFG-------AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~-d~~i~~~d~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+.+. ++.+..+|. +++.+..+... .....+.+.++|.++++. .++.|..||.+
T Consensus 93 ~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 93 AWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred EecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 8887 777888885 77777776532 234567788999988876 57999999864
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.46 E-value=5.7e-12 Score=84.42 Aligned_cols=131 Identities=10% Similarity=0.017 Sum_probs=89.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCe----------------EEEEECCCCCCCC-eEEeC--
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKN----------------IRIYDLNKPDAEP-TVYRG-- 61 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~----------------v~i~~~~~~~~~~-~~~~~-- 61 (134)
+|++||+.+++.+.......... .++|+|||+.|+.++.++. |++|++.++.... ..+..
T Consensus 152 ~i~v~d~~tg~~~~~~~~~~~~~-~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~ 230 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLERVKFS-CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD 230 (710)
T ss_dssp EEEEEETTTTEEEEEEEEEECSC-CEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEEEEECCCCCCCcccccCcccc-eEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC
Confidence 37899999998876433222233 4999999999998877655 9999998754321 22232
Q ss_pred CCCCEeEEEEeeCCCEEEEeeC-----CCcEEEEecCC------Cc-eeEEEec-CCCCeEEEEccCCcEEEE-ec----
Q psy6446 62 HSSGIKHVQFFKNNTRLISCAE-----DKTVRLWDVSA------SA-EVQKLEF-GAVPNSLEISRDGTTITV-TH---- 123 (134)
Q Consensus 62 ~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~------~~-~~~~~~~-~~~v~~~~~~~~~~~l~~-~~---- 123 (134)
+...+..+.|+||+++|+..+. +..+.+||+.+ +. ....+.. ...+. ..|+|+|..++. +.
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~ 309 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRHSP 309 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTTCT
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCCCC
Confidence 3455789999999999887654 56899999976 43 3444443 33333 358888877664 32
Q ss_pred CCeEEEEeCC
Q psy6446 124 GSCVTFLDAN 133 (134)
Q Consensus 124 ~~~i~i~d~~ 133 (134)
.+.|.+||+.
T Consensus 310 ~~~l~~~d~~ 319 (710)
T 2xdw_A 310 NYRLINIDFT 319 (710)
T ss_dssp TCEEEEEETT
T ss_pred CCEEEEEeCC
Confidence 2479999875
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.44 E-value=7.6e-12 Score=76.95 Aligned_cols=111 Identities=13% Similarity=0.143 Sum_probs=77.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC---C--eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND---K--NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
|.+||+.+++... + ..+ ..+.|+|+|+.|+..+.+ + .|.+|++.++.. .. +..+.. +..+.|+|+++
T Consensus 45 l~~~d~~~~~~~~-l---~~~-~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~-~~-l~~~~~-~~~~~wspdg~ 116 (347)
T 2gop_A 45 IVIENLKNNARRF-I---ENA-TMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSS-KK-ILEAKN-IRSLEWNEDSR 116 (347)
T ss_dssp EEEEETTTCCEEE-E---ESC-EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEE-EE-EEEESE-EEEEEECTTSS
T ss_pred EEEEeCCCCceEE-c---ccC-CCeEECCCCCEEEEEEeccCCCcceEEEEECCCCce-EE-EEcCCC-ccceeECCCCC
Confidence 6788888776533 3 233 349999999999887643 3 477788876442 22 222334 89999999999
Q ss_pred EEEEeeCC---------------------------CcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe
Q psy6446 77 RLISCAED---------------------------KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 77 ~l~~~~~d---------------------------~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 122 (134)
.|+.++.+ ..|.+||+.+++....+... .+..+.|+|+| +++++
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEE
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEE
Confidence 98877632 46899999888763444334 78899999999 66654
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.44 E-value=1e-11 Score=76.32 Aligned_cols=130 Identities=12% Similarity=0.134 Sum_probs=92.3
Q ss_pred eeEeecCCCceeeEEeeCCC----------ceeeEEEccC-CcEEEEecCCCeEEEEECCCCCCCCeEE--eCCCCCEeE
Q psy6446 2 GTVWDAVSGEELHSFQHPHI----------VKSSVHFATD-SYRLATGSNDKNIRIYDLNKPDAEPTVY--RGHSSGIKH 68 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~----------~~~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~--~~~~~~v~~ 68 (134)
|++|| .+++.+..+..... ....++++|+ +..+++...++.|++|+..+++.. ..+ ..+...+..
T Consensus 168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~-~~~~~~~~~~~~~~ 245 (329)
T 3fvz_A 168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV-REIKHASFGRNVFA 245 (329)
T ss_dssp EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEECCTTTTTCEEE
T ss_pred EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE-EEEeccccCCCcce
Confidence 67888 56777777652211 1344999998 777778888899999999865432 333 235567888
Q ss_pred EEEee------CCCEEEEeeCCCcEEEEecCCCceeEEEe----cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 69 VQFFK------NNTRLISCAEDKTVRLWDVSASAEVQKLE----FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 69 ~~~~~------~~~~l~~~~~d~~i~~~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++++| +++..++...+..+.+||..+++.+..+. ....+..++++|+|.++++. .++.|++|++.
T Consensus 246 ~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 246 ISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 99988 33333333445689999999999888774 23457899999999666665 57899999864
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=9.3e-11 Score=70.84 Aligned_cols=110 Identities=13% Similarity=0.133 Sum_probs=80.5
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEECCCCCCC---CeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCcee
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAE---PTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEV 98 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 98 (134)
....++|+|+++.+++.+.++.|.+|++...... ...+..+.+.+..+++.++++.+++. ++.|.+||.. ++.+
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 3345999999998877788899999998732222 12223345567889999999876665 7889999986 7777
Q ss_pred EEEecCCCCeEEEE-ccCCcEEEEecCCeEEEEeCCC
Q psy6446 99 QKLEFGAVPNSLEI-SRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 99 ~~~~~~~~v~~~~~-~~~~~~l~~~~~~~i~i~d~~t 134 (134)
..+.....+.+++| .|+++.|.++..+.+..++.++
T Consensus 250 ~~~~~~~~~~~~~f~~~d~~~L~v~t~~~l~~~~~~~ 286 (296)
T 3e5z_A 250 GRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWSIETNV 286 (296)
T ss_dssp EEEECSSCCCEEEEESTTSCEEEEEETTEEEEEECSC
T ss_pred EEEECCCCceeEEEECCCCCEEEEEcCCeEEEEEccc
Confidence 77765444899999 5888888877666777777653
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.43 E-value=8.6e-11 Score=71.98 Aligned_cols=123 Identities=8% Similarity=0.078 Sum_probs=87.3
Q ss_pred CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCC----C
Q psy6446 10 GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAED----K 85 (134)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~ 85 (134)
++....+.........++|+++++.++++..++.|.+||..++.. ......+...+.+++++|+++.+++...+ +
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 34 AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTG 112 (333)
T ss_dssp CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCC
T ss_pred cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE-EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCc
Confidence 344445543333345599999999888888899999999887542 22233566789999999999887777666 6
Q ss_pred cEEEEecCCCceeEEEe---cCCCCeEEEEccCCcEEEEec-------CCeEEEEeCC
Q psy6446 86 TVRLWDVSASAEVQKLE---FGAVPNSLEISRDGTTITVTH-------GSCVTFLDAN 133 (134)
Q Consensus 86 ~i~~~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~-------~~~i~i~d~~ 133 (134)
.|.+||..+++....+. ....+..++++|+|+++++.. .+.|..+|.+
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 89999988776543332 234678999999998877654 2567777653
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.42 E-value=6.3e-12 Score=84.21 Aligned_cols=110 Identities=14% Similarity=0.173 Sum_probs=79.1
Q ss_pred ceeeEEEccCCcEEEEecCCC-----eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCc----------
Q psy6446 22 VKSSVHFATDSYRLATGSNDK-----NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKT---------- 86 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------- 86 (134)
.+..++|||||++|+.++.++ .|++||+.++........ ...+..++|+||++.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc--CcccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 345599999999998765433 899999988654322222 223678999999999998877655
Q ss_pred ------EEEEecCCCcee--EEEec---CCCCeEEEEccCCcEEEEe-c-----CCeEEEEeCC
Q psy6446 87 ------VRLWDVSASAEV--QKLEF---GAVPNSLEISRDGTTITVT-H-----GSCVTFLDAN 133 (134)
Q Consensus 87 ------i~~~d~~~~~~~--~~~~~---~~~v~~~~~~~~~~~l~~~-~-----~~~i~i~d~~ 133 (134)
|.+|++.+++.. ..... ...+..+.|+|||++|+.+ . +..|++||+.
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence 999999887633 22222 2335789999999988754 2 4689999874
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.41 E-value=1.5e-11 Score=82.23 Aligned_cols=109 Identities=12% Similarity=0.104 Sum_probs=77.1
Q ss_pred ceeeEEEccCCcEEE-----EecCCCeEEEEECCCCCCC-CeEEeCCCCCEeEEEEeeCCCEEEEeeCCCc---------
Q psy6446 22 VKSSVHFATDSYRLA-----TGSNDKNIRIYDLNKPDAE-PTVYRGHSSGIKHVQFFKNNTRLISCAEDKT--------- 86 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~-----~~~~d~~v~i~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------- 86 (134)
.+..++|||||++|+ .|+.+..|++||+.++... ...+.. .....++|+||++.|+.++.+..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~ 199 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERP 199 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc--ccccceEEecCCCEEEEEEecCCCCCccccCC
Confidence 455599999999998 4555678999999987643 111111 11268999999999998887765
Q ss_pred ----EEEEecCCCcee--EEEec---CCCCeEEEEccCCcEEEEe-cCC----eEEEEeC
Q psy6446 87 ----VRLWDVSASAEV--QKLEF---GAVPNSLEISRDGTTITVT-HGS----CVTFLDA 132 (134)
Q Consensus 87 ----i~~~d~~~~~~~--~~~~~---~~~v~~~~~~~~~~~l~~~-~~~----~i~i~d~ 132 (134)
|++|++.++... ..... ...+..+.|+|||++++.+ .++ .|+++|.
T Consensus 200 ~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 200 GYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp GGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECT
T ss_pred CCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcC
Confidence 999999887632 22222 2456789999999988764 333 6777664
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.40 E-value=9.2e-12 Score=83.27 Aligned_cols=131 Identities=13% Similarity=-0.007 Sum_probs=88.1
Q ss_pred CeeEeecCCCcee-eEEeeCCCceeeEEEccCCcEEEEecCCCe-------------EEEEECCCCCCCC-eEEe--CCC
Q psy6446 1 MGTVWDAVSGEEL-HSFQHPHIVKSSVHFATDSYRLATGSNDKN-------------IRIYDLNKPDAEP-TVYR--GHS 63 (134)
Q Consensus 1 ~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-------------v~i~~~~~~~~~~-~~~~--~~~ 63 (134)
+|++||+.+++.+ .. .........++|+|||+.|+.++.|.. |++|++.++.... ..+. .+.
T Consensus 148 ~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~ 226 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP 226 (695)
T ss_dssp EEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT
T ss_pred EEEEEECCCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC
Confidence 3789999998865 21 111111134999999999999887765 9999998765321 2222 344
Q ss_pred CCEeEEEEeeCCCEEEEeeCCC----cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec----CCeEEEEeCC
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDK----TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH----GSCVTFLDAN 133 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~ 133 (134)
..+..+.|+|||++|+..+.++ .+.++|..+++...............+ ++|.+++.+. ++.|.+||+.
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTT
T ss_pred EEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCC
Confidence 5788999999999998777655 677777665654444444555566666 5666444443 4789999874
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.40 E-value=5.7e-11 Score=73.02 Aligned_cols=128 Identities=9% Similarity=0.007 Sum_probs=92.7
Q ss_pred CeeEeecCCCceeeEEeeCC------CceeeEEEccCCcEEEEec--CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEe
Q psy6446 1 MGTVWDAVSGEELHSFQHPH------IVKSSVHFATDSYRLATGS--NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFF 72 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~ 72 (134)
+|.+||..+++....+.... .... +++ . +..++++. .++.|.++|..+.+.. ..+.. ......+.++
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~-i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~-~~i~~-g~~p~~i~~~ 180 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMDMESGSTEQ-MVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVV-DELTI-GIQPTSLVMD 180 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCBCCC-EEE-E-TTEEEEEECTTCCEEEEEETTTTEEE-EEEEC-SSCBCCCEEC
T ss_pred eEEEEECCCCeEEEEEEcCCccccCCCcce-EEE-E-CCEEEEEcCCCCCEEEEEECCCCeEE-EEEEc-CCCccceEEc
Confidence 37889999999888877433 3444 666 3 44554444 4889999999886533 23332 3446788999
Q ss_pred eCCCEEEEeeCC----------CcEEEEecCCCceeEEEec--CCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 73 KNNTRLISCAED----------KTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 73 ~~~~~l~~~~~d----------~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
|+++.+++...+ +.|.++|..+++....+.. ...+..++++|+++.+.++.. .|.+||+.+
T Consensus 181 ~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t 253 (328)
T 3dsm_A 181 KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEA 253 (328)
T ss_dssp TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTC
T ss_pred CCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCC
Confidence 999877776654 7899999999888777764 346899999999988877644 888998753
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.39 E-value=7.5e-11 Score=70.95 Aligned_cols=128 Identities=13% Similarity=0.182 Sum_probs=97.2
Q ss_pred eeEeecCCCceeeEEeeC-CCceeeEEEccCCcEEEEecC-CCeEEEEECCCCCCCCeEEe------CCCCCEeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQHP-HIVKSSVHFATDSYRLATGSN-DKNIRIYDLNKPDAEPTVYR------GHSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~------~~~~~v~~~~~~~ 73 (134)
|..||. +|+.+..+... ...+..+.+.++|+.+++.+. ++.+..++. +++.. ..+. .+......+++.+
T Consensus 58 V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l-~~~~~~~~~~~~~~~~~~v~~~~ 134 (276)
T 3no2_A 58 AKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVL-SKTEFETGIERPHAQFRQINKNK 134 (276)
T ss_dssp EEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEE-EEEEECCSCSSGGGSCSCCEECT
T ss_pred EEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEE-EEEeccCCCCcccccccCceECC
Confidence 678887 89999999853 334555889999999998876 777777775 33322 2222 1222445667888
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec-CCeEEEEeCC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDAN 133 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 133 (134)
+++++++...++.|..||.. ++.+..+.....+.++...++|..++++. ++.|..+|.+
T Consensus 135 ~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 135 KGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 99999999999999999987 99999888777778888999999888764 5689888875
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.39 E-value=1.2e-12 Score=81.69 Aligned_cols=131 Identities=9% Similarity=-0.030 Sum_probs=88.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeE-------------
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKH------------- 68 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~------------- 68 (134)
|.+||+.+++......+.......+.|+|+|+.|+.++.++.+++|++.++.. ......+......
T Consensus 62 l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~ 140 (396)
T 3c5m_A 62 YYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE-QVIYTVDEEWKGYGTWVANSDCTKLV 140 (396)
T ss_dssp EEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE-EEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred EEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc-EEEEecccccCCCCCEEEeccCCccc
Confidence 56788887776544334433333378999999999998888999999987543 2333333332222
Q ss_pred ------EEEeeCCCEEEEe-----eCCCcEEEEecCCCceeEEEecCCCCeEEEEcc-CCcEEEE-ecC------CeEEE
Q psy6446 69 ------VQFFKNNTRLISC-----AEDKTVRLWDVSASAEVQKLEFGAVPNSLEISR-DGTTITV-THG------SCVTF 129 (134)
Q Consensus 69 ------~~~~~~~~~l~~~-----~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~-~~~------~~i~i 129 (134)
..|+|+++.++.. ..+..|.+||+.+++..........+..+.|+| ++..++. +.+ ..|.+
T Consensus 141 ~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~ 220 (396)
T 3c5m_A 141 GIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWL 220 (396)
T ss_dssp EEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEE
T ss_pred cccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEE
Confidence 2456666665543 345679999999888766666677788999999 7876654 322 46888
Q ss_pred EeCC
Q psy6446 130 LDAN 133 (134)
Q Consensus 130 ~d~~ 133 (134)
||+.
T Consensus 221 ~d~~ 224 (396)
T 3c5m_A 221 VNED 224 (396)
T ss_dssp EETT
T ss_pred EECC
Confidence 8864
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.37 E-value=1.4e-10 Score=70.08 Aligned_cols=128 Identities=11% Similarity=0.053 Sum_probs=86.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC----CCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH----SSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~ 77 (134)
|..||..++ ...+........+++++++|+++++...++.|.+||..++... ...... ...+..++++|+++.
T Consensus 52 i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~l 128 (296)
T 3e5z_A 52 TWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE-SIADSFEGKKLNSPNDVCLAPDGSL 128 (296)
T ss_dssp EEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE-EEECEETTEECCCCCCEEECTTSCE
T ss_pred EEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE-EEeeccCCCCCCCCCCEEECCCCCE
Confidence 678888766 5556544455556999999998888777789999998765422 111111 134678999999998
Q ss_pred EEE----ee-------------CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 78 LIS----CA-------------EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 78 l~~----~~-------------~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++ +. ..+.|..++.. ++.............++|+|+++.+++. .++.|.+||+.
T Consensus 129 ~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 129 WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 886 32 13456666654 4443333344556899999999988554 46899999874
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=2.5e-11 Score=76.09 Aligned_cols=111 Identities=10% Similarity=0.063 Sum_probs=83.2
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
.|++||+.+........ +... +..+.+.+. .++++..||.+.+||+.++... . +...|++++|+|+| ++
T Consensus 107 ~l~v~dv~sl~~~~~~~~~~~~-v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--~---~~~~Vs~v~WSpkG--~~ 176 (388)
T 1xip_A 107 ALYSLDLEELSEFRTVTSFEKP-VFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--Q---LAQNVTSFDVTNSQ--LA 176 (388)
T ss_dssp EEEEEESSSTTCEEEEEECSSC-EEEEEECSS--EEEEEETTSEEEEEETTTCCEE--E---EEESEEEEEECSSE--EE
T ss_pred cEEEEEchhhhccCccceeecc-eeeEEecCC--CEEEEECCCCEEEEEccCCccc--c---ccCCceEEEEcCCc--eE
Confidence 37899998766555554 3444 444666543 3888899999999999875432 1 44689999999999 67
Q ss_pred EeeCCCcEEEEecCCCce--eEEEe----------cCCCCeEEEEccCCcEEEE
Q psy6446 80 SCAEDKTVRLWDVSASAE--VQKLE----------FGAVPNSLEISRDGTTITV 121 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~--~~~~~----------~~~~v~~~~~~~~~~~l~~ 121 (134)
.+..||.+++|+...... ...+. +...|.++.|.+++.++++
T Consensus 177 vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 899999999998877765 55562 3566899999999988875
No 193
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.37 E-value=2e-10 Score=71.89 Aligned_cols=126 Identities=14% Similarity=-0.002 Sum_probs=87.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec----------CCCeEEEEECCCCCCCCeEEeC------CCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS----------NDKNIRIYDLNKPDAEPTVYRG------HSS 64 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~------~~~ 64 (134)
+|.++|..+++.+..+...... . +.++||++.++++. .++.|.++|..+.+.......+ +..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~-i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-N-PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-C-eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 4689999999998888744444 5 99999999999886 3678999999875433221111 012
Q ss_pred CEeEEEEeeCCCEEEEeeC--CCcEEEEecCCCceeEE-EecCCCCeEEEEccCCc--EEEEecCCeEEEEeC
Q psy6446 65 GIKHVQFFKNNTRLISCAE--DKTVRLWDVSASAEVQK-LEFGAVPNSLEISRDGT--TITVTHGSCVTFLDA 132 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~-~~~~~~v~~~~~~~~~~--~l~~~~~~~i~i~d~ 132 (134)
....+.++||+++|+.+.. ++.|.++| .+++.... +..... +.+.|++. ++..+.||.+.++|.
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC
Confidence 3568999999999998764 47899999 99988877 654332 44455553 333346677777664
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.36 E-value=8.1e-11 Score=73.64 Aligned_cols=102 Identities=13% Similarity=0.067 Sum_probs=78.5
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec----------CCCeEEEEECCCCCCCCeEEeCC------CCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS----------NDKNIRIYDLNKPDAEPTVYRGH------SSG 65 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~~------~~~ 65 (134)
|.+.|..+++.+..+...... . +.++|+|+.+++++ .++.|.+||..+.+.......+. ...
T Consensus 61 V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~ 138 (386)
T 3sjl_D 61 QFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTY 138 (386)
T ss_dssp EEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred EEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCC
Confidence 679999999999999844444 5 99999999998875 35789999998865433222221 124
Q ss_pred EeEEEEeeCCCEEEEeeC--CCcEEEEecCCCceeEEEecCC
Q psy6446 66 IKHVQFFKNNTRLISCAE--DKTVRLWDVSASAEVQKLEFGA 105 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~ 105 (134)
...+.++||+++++.+.. ++.|.++|+.+++.+..+....
T Consensus 139 P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred CceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC
Confidence 678999999999887764 6889999999999998886543
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.29 E-value=3e-10 Score=74.57 Aligned_cols=104 Identities=14% Similarity=0.171 Sum_probs=82.8
Q ss_pred ccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecC--CCceeEEEecCCC
Q psy6446 29 ATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVS--ASAEVQKLEFGAV 106 (134)
Q Consensus 29 ~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~--~~~~~~~~~~~~~ 106 (134)
++.+..+++...++.|.++|..+++.. ..+. ....+..+.|+||++++++++.++.|.+||+. +++.+..+.....
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~-~~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~ 241 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIK-TVLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE 241 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEE-EEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEE-EEEe-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC
Confidence 344556677778899999999886543 3333 33457799999999999999999999999995 7888888877777
Q ss_pred CeEEEEc----cCCcEEEEe--cCCeEEEEeCCC
Q psy6446 107 PNSLEIS----RDGTTITVT--HGSCVTFLDANS 134 (134)
Q Consensus 107 v~~~~~~----~~~~~l~~~--~~~~i~i~d~~t 134 (134)
...++|+ |+|++++++ .++.|.++|..+
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 8899999 699988765 469999999754
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.27 E-value=2.5e-10 Score=70.18 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=77.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC---------------------------CeEEEEECCCCCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND---------------------------KNIRIYDLNKPDA 54 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---------------------------~~v~i~~~~~~~~ 54 (134)
|.+||+.+++......... +..+.|+|+|+.|+.++.+ ..+++|++.++..
T Consensus 87 l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 87 IWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred EEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 6788888887766665554 5559999999998887632 5788999987543
Q ss_pred CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCC-------cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cC--
Q psy6446 55 EPTVYRGHSSGIKHVQFFKNNTRLISCAEDK-------TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HG-- 124 (134)
Q Consensus 55 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~-- 124 (134)
. ..+.. . .+..+.|+|++ .++++..+. ...+|.+.+++....... ..+. .++|+|+.++.. .+
T Consensus 165 ~-~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~--~~spdg~~l~~~~~~~~ 237 (347)
T 2gop_A 165 I-EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFY--AVDSDGERILLYGKPEK 237 (347)
T ss_dssp E-EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEE--EEEECSSCEEEEECCSS
T ss_pred E-eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-ccee--eECCCCCEEEEEEcccc
Confidence 1 22333 3 78899999999 777665542 334444444444333333 3333 349999877653 22
Q ss_pred ------CeEEEEe
Q psy6446 125 ------SCVTFLD 131 (134)
Q Consensus 125 ------~~i~i~d 131 (134)
..|.+||
T Consensus 238 ~~~~~~~~l~~~d 250 (347)
T 2gop_A 238 KYMSEHNKLYIYD 250 (347)
T ss_dssp SCCCSSCEEEEEC
T ss_pred CCccccceEEEEC
Confidence 4687776
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.27 E-value=1.2e-09 Score=66.21 Aligned_cols=129 Identities=14% Similarity=0.206 Sum_probs=86.3
Q ss_pred eEeecCCCceeeEEeeCCCceeeEEEc----cCCcEEEEe-cCCCeEEEEECC-CCCC----CCeEEeCCC-CCEeEEEE
Q psy6446 3 TVWDAVSGEELHSFQHPHIVKSSVHFA----TDSYRLATG-SNDKNIRIYDLN-KPDA----EPTVYRGHS-SGIKHVQF 71 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~-~~d~~v~i~~~~-~~~~----~~~~~~~~~-~~v~~~~~ 71 (134)
..+|.. ++......+.... ..++++ |+++.++.+ ..++.|.+|++. .+.. ....+..+. ..+..+++
T Consensus 156 ~~~~~~-g~~~~~~~~~~~~-~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 156 YCFTTD-GQMIQVDTAFQFP-NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp EEECTT-SCEEEEEEEESSE-EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred EEECCC-CCEEEeccCCCCc-ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence 344443 4443333333333 348899 998765544 567899999976 2211 111122232 55788999
Q ss_pred eeCCCEEEEeeCCCcEEEEecCCCceeEEEecC-CCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 72 FKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG-AVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 72 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
.++++.+++...++.|.+||..+++....+... ..+.+++++|+++.|.++ .++.|..|++.
T Consensus 234 d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 234 DEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp BTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 999988888778889999998877766666543 678899999999855544 35799999875
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.27 E-value=8.6e-10 Score=74.40 Aligned_cols=130 Identities=11% Similarity=0.053 Sum_probs=84.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCC--------------eEEEEECCCCCCCC-eEEeC--CC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDK--------------NIRIYDLNKPDAEP-TVYRG--HS 63 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--------------~v~i~~~~~~~~~~-~~~~~--~~ 63 (134)
+|++||+.+++.+........ ...++|+|| +.|+.++.++ .|++|++.++.... ..+.. +.
T Consensus 190 ~i~v~dl~tg~~~~~~~~~~~-~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~ 267 (741)
T 1yr2_A 190 TVKFVGVADGKPLADELKWVK-FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELP 267 (741)
T ss_dssp EEEEEETTTCCEEEEEEEEEE-SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred EEEEEECCCCCCCCccCCCce-eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCC
Confidence 378999999987654222211 234899999 8888877654 38899987754221 22322 22
Q ss_pred CCEeEEEEeeCCCEEEEeeCC-----CcEEEEecCCC--ceeEEEe-cCCCCeEEEEccCCcEEEE-ec----CCeEEEE
Q psy6446 64 SGIKHVQFFKNNTRLISCAED-----KTVRLWDVSAS--AEVQKLE-FGAVPNSLEISRDGTTITV-TH----GSCVTFL 130 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~----~~~i~i~ 130 (134)
..+..+.|+|||++|+..+.+ ..|.+||+.++ +....+. ........ ++|+|..++. +. ++.|.+|
T Consensus 268 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~ 346 (741)
T 1yr2_A 268 KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRV 346 (741)
T ss_dssp TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence 358899999999998876654 37999999876 4133343 33344444 3488877665 32 3579999
Q ss_pred eCC
Q psy6446 131 DAN 133 (134)
Q Consensus 131 d~~ 133 (134)
|+.
T Consensus 347 d~~ 349 (741)
T 1yr2_A 347 DLS 349 (741)
T ss_dssp ECS
T ss_pred eCC
Confidence 875
No 199
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.25 E-value=5e-10 Score=71.08 Aligned_cols=102 Identities=14% Similarity=0.022 Sum_probs=79.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec----------CCCeEEEEECCCCCCCCeEEeC------CCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS----------NDKNIRIYDLNKPDAEPTVYRG------HSS 64 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~------~~~ 64 (134)
+|.++|..+++.+..+.-.... . +.++|+++.++++. .++.|.++|..+.+.......+ ...
T Consensus 100 ~VsVID~~t~~vv~~I~vG~~P-g-ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~ 177 (426)
T 3c75_H 100 QQFVIDGSTGRILGMTDGGFLP-H-PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGT 177 (426)
T ss_dssp EEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred eEEEEECCCCEEEEEEECCCCC-c-eEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCC
Confidence 3789999999999999854455 6 99999999998876 3678999999886543322222 123
Q ss_pred CEeEEEEeeCCCEEEEeeC--CCcEEEEecCCCceeEEEecC
Q psy6446 65 GIKHVQFFKNNTRLISCAE--DKTVRLWDVSASAEVQKLEFG 104 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~ 104 (134)
....+.++||+++++.+.. ++.|.+.|+.+++.+..+...
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence 4568999999999998764 578999999999988888753
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.25 E-value=6.8e-10 Score=66.02 Aligned_cols=109 Identities=8% Similarity=0.002 Sum_probs=78.5
Q ss_pred eeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEec
Q psy6446 24 SSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 103 (134)
Q Consensus 24 ~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 103 (134)
..++++++++.+++...++.|.+|+....... .....+...+..+++.+++..+++...++.|.+||............
T Consensus 153 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~ 231 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFT 231 (270)
T ss_dssp CCEEECTTCCEEEEEGGGTEEEEECTTTCCEE-ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCC
T ss_pred eeEEEeCCCCEEEEECCCCEEEEEecCCCceE-eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccC
Confidence 34999999987777777889999998764321 11122336688999999997777777788999999865443321111
Q ss_pred -CCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 104 -GAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 104 -~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
...+.+++++++|+++++. .++.|.++++.
T Consensus 232 ~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 232 GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp SCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred CCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 2457899999999876665 57999999874
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.21 E-value=1.5e-09 Score=64.56 Aligned_cols=130 Identities=9% Similarity=0.013 Sum_probs=86.5
Q ss_pred eeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.+||...+.. ..+. ........++++++++.+++...++.|.+|+..+.... .........+..+++.++++.+++
T Consensus 89 i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 89 VVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPFTGLNDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp EEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECCCCSCCSCCCEEECTTCCEEEE
T ss_pred EEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-eeccccCCCceeEEEeCCCCEEEE
Confidence 56777654432 3332 22133444999999987777777889999976543221 111122346788999999987777
Q ss_pred eeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
...++.|.+||............ ...+.+++++++|.++++. .++.|.+||..
T Consensus 167 ~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 167 DTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp EGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred ECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 77788999999876654332222 2567899999999777766 46899999875
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.15 E-value=1e-09 Score=68.77 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=80.9
Q ss_pred EEEccCCcEEEEecC-----CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee----------CCCcEEEE
Q psy6446 26 VHFATDSYRLATGSN-----DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA----------EDKTVRLW 90 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~ 90 (134)
....|+++.+++... ++.|.++|..+.+.......+. .+ .+.++||+++++.+. .++.|.+|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~-~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF-LP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCC-CC--cEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 445689998888765 5799999998866443333333 33 499999999987765 35789999
Q ss_pred ecCCCceeEEEecC--------CCCeEEEEccCCcEEEEe-c--CCeEEEEeCCC
Q psy6446 91 DVSASAEVQKLEFG--------AVPNSLEISRDGTTITVT-H--GSCVTFLDANS 134 (134)
Q Consensus 91 d~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~-~--~~~i~i~d~~t 134 (134)
|..+.+....+... .....+.++|||+++.++ . ++.|.++|+++
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC
Confidence 99999998888643 256789999999987765 2 58999999864
No 203
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.15 E-value=6.9e-09 Score=63.07 Aligned_cols=125 Identities=9% Similarity=0.028 Sum_probs=81.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC------CeEEEEECCCCCCCC--eEE-eCCCCCEeEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND------KNIRIYDLNKPDAEP--TVY-RGHSSGIKHVQFF 72 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------~~v~i~~~~~~~~~~--~~~-~~~~~~v~~~~~~ 72 (134)
|..+|..+++..... ..... ..++|+|+++.|+.+... +.|..|++.... .. ..+ ....+....+++.
T Consensus 171 v~~~d~~~g~~~~~~-~~~~p-~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d 247 (305)
T 3dr2_A 171 VYRLPPDGSPLQRMA-DLDHP-NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVD 247 (305)
T ss_dssp EEEECSSSCCCEEEE-EESSE-EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEEC
T ss_pred EEEEcCCCCcEEEEe-cCCCC-cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEEC
Confidence 445565555544333 22233 348999999988776554 689999987532 11 111 1123445678899
Q ss_pred eCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 73 KNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 73 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
++++..++ ..+ .|.+|+. +++.+..+.....+..++|+|+++.|.++..+.+..+++
T Consensus 248 ~~G~lwv~-~~~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~~~ 304 (305)
T 3dr2_A 248 RGGWLWSS-SGT-GVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWMLPL 304 (305)
T ss_dssp TTSCEEEC-CSS-EEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEEEC
T ss_pred CCCCEEEe-cCC-cEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEEEC
Confidence 99985444 444 4999997 577777777666789999999988887776666666554
No 204
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.15 E-value=6.5e-09 Score=62.10 Aligned_cols=128 Identities=11% Similarity=0.075 Sum_probs=91.5
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCC----CCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHS----SGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~ 77 (134)
+.++|..+.+.+.++... .... ..++++++.++++..++.+.++|..+.+.......+.. ..++.+.|. +++.
T Consensus 88 v~viD~~t~~v~~~i~~g-~~~g-~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQ-MKDG-WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEEETTTTEEEEEEECC-SSSC-CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCCCcEEEEEECC-CCCe-EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 678999999999998744 1222 44667888888877788999999988654333222211 236778887 6755
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEecC--------------CCCeEEEEccCCcEEEE-e-cCCeEEEEeC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLEFG--------------AVPNSLEISRDGTTITV-T-HGSCVTFLDA 132 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~-~-~~~~i~i~d~ 132 (134)
.+....++.|.+.|..+++....+... .....++|+|+++.+++ + ..+++...++
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 555556789999999999999888742 24489999999876554 4 4588887765
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.15 E-value=1.1e-09 Score=73.97 Aligned_cols=109 Identities=12% Similarity=0.121 Sum_probs=74.9
Q ss_pred ceeeEEEccCCcEEEEecCC-----CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCc----------
Q psy6446 22 VKSSVHFATDSYRLATGSND-----KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKT---------- 86 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------- 86 (134)
.+..+.|+|||++|+.++.+ ..|++||+.++..... ..+...+..++|+|| +.|+.++.++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~--~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD--ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE--EEEEEESCCCEESTT-SEEEEEECCCC--------CC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc--cCCCceeccEEEECC-CEEEEEEecCcccccccccCC
Confidence 44559999999999876543 4699999998654221 112222357899999 98887776543
Q ss_pred ----EEEEecCCCcee--EEEecC---CCCeEEEEccCCcEEEEe-cC-----CeEEEEeCC
Q psy6446 87 ----VRLWDVSASAEV--QKLEFG---AVPNSLEISRDGTTITVT-HG-----SCVTFLDAN 133 (134)
Q Consensus 87 ----i~~~d~~~~~~~--~~~~~~---~~v~~~~~~~~~~~l~~~-~~-----~~i~i~d~~ 133 (134)
|.+|++.++... ..+... ..+..+.|+|||++++.. .+ ..|++||+.
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~ 302 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT 302 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE
T ss_pred CCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC
Confidence 889998776532 222222 246789999999988754 22 489999874
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=7.1e-08 Score=60.43 Aligned_cols=108 Identities=15% Similarity=0.189 Sum_probs=74.0
Q ss_pred EEccCCcEEEEecCCCeEEEEECCCCCCC-CeEEeC----------CCCCEeEEEEeeCCCEEEEeeC----------CC
Q psy6446 27 HFATDSYRLATGSNDKNIRIYDLNKPDAE-PTVYRG----------HSSGIKHVQFFKNNTRLISCAE----------DK 85 (134)
Q Consensus 27 ~~~~~~~~l~~~~~d~~v~i~~~~~~~~~-~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------d~ 85 (134)
.+.+++..++..+..+.+.+.|+...... ...+.. .......+.++|+++.++.... .+
T Consensus 219 ~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 219 AQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred eeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCC
Confidence 34454444444446678888887643211 111110 1223445788999888776543 35
Q ss_pred cEEEEecCCCceeEEEecCCCCeEEEEccCCc-EEEEe--cCCeEEEEeCCC
Q psy6446 86 TVRLWDVSASAEVQKLEFGAVPNSLEISRDGT-TITVT--HGSCVTFLDANS 134 (134)
Q Consensus 86 ~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~--~~~~i~i~d~~t 134 (134)
.|.++|..+++.+..+.......++.|+|||+ .++++ .++.|.++|+++
T Consensus 299 ~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 299 EVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred eEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 79999999999999998887899999999998 66665 379999999864
No 207
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.09 E-value=8.7e-08 Score=57.53 Aligned_cols=127 Identities=9% Similarity=-0.029 Sum_probs=85.5
Q ss_pred eeEeecCCCceeeEE-eeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSF-QHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.+||. +++..... .........++++++++..++...++.+..+|. ++.............+..+++.++++.+++
T Consensus 122 i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 199 (299)
T 2z2n_A 122 IGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFV 199 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEE
T ss_pred EEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEE
Confidence 456666 44443221 122233445999999988887777789999998 433211112233456889999999887777
Q ss_pred eeCCCcEEEEecCCCceeEEEec---CCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEF---GAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
...++.|..||. +++... +.. ...+.+++++++|.++++. .++.|..||.
T Consensus 200 ~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 200 EIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp ETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred ccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 666788999998 665432 322 2567899999999877766 5688999985
No 208
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.08 E-value=1e-09 Score=68.52 Aligned_cols=96 Identities=11% Similarity=-0.065 Sum_probs=72.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec----------CCCeEEEEECCCCCCCCeEEeCC-------CC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS----------NDKNIRIYDLNKPDAEPTVYRGH-------SS 64 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~~-------~~ 64 (134)
|.++|..+++.+.++.-.... . +.++|+++.++++. .++.|.+||+.+.+... .+... ..
T Consensus 48 vsvID~~t~~v~~~i~vG~~P-~-i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~-~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 48 NWVSCAGCGVTLGHSLGAFLS-L-AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA-DIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEETTTTEEEEEEEECTTC-E-EEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE-EEEETTSCSCCBSC
T ss_pred EEEEECCCCeEEEEEeCCCCC-c-eEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE-EEECCCccccccCC
Confidence 569999999999999844444 6 99999999998886 36789999999876543 33222 13
Q ss_pred CEeEEEEeeCCCEEEEeeC--CCcEEE--EecCCCceeEEEec
Q psy6446 65 GIKHVQFFKNNTRLISCAE--DKTVRL--WDVSASAEVQKLEF 103 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~--d~~i~~--~d~~~~~~~~~~~~ 103 (134)
....+.++||+++++.+.. +..+.+ +|..+ ...+..
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v 164 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS 164 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC
Confidence 4678999999999998764 456888 99877 444443
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.07 E-value=3.3e-08 Score=62.63 Aligned_cols=129 Identities=12% Similarity=-0.031 Sum_probs=85.2
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCC--eEEEEECCCCCCCCeEE----eCCCCCEeEEEEeeCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDK--NIRIYDLNKPDAEPTVY----RGHSSGIKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~v~i~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~ 75 (134)
|++||..+++....... ..... ++|+++++.|+++..++ .|.+++....... ..+ ......+.+++++|++
T Consensus 154 I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~-~~~g~~~~~~~~~p~~iav~p~~ 230 (409)
T 3hrp_A 154 VRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP-TRIGQLGSTFSGKIGAVALDETE 230 (409)
T ss_dssp EEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE-EEEEECCTTSCSCCCBCEECTTS
T ss_pred EEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee-EEeeeccchhcCCcEEEEEeCCC
Confidence 67888877766554443 22334 89999999988887765 7888887654432 222 1144667899999955
Q ss_pred CEEEEeeCCCcEEEEecCCCceeEEE---ec-C-C-CCe-EEEEccC-CcEEEEe-cCCeEEEEeCC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEVQKL---EF-G-A-VPN-SLEISRD-GTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~~~~---~~-~-~-~v~-~~~~~~~-~~~l~~~-~~~~i~i~d~~ 133 (134)
..|+.+..++.|..||..++...... .. . . ... .++|+|+ +.++++. .++.|+.|+..
T Consensus 231 g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~ 297 (409)
T 3hrp_A 231 EWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp SEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred CeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence 55665777889999998876543221 11 1 1 123 9999996 4544454 46899999864
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.06 E-value=8.9e-08 Score=60.68 Aligned_cols=129 Identities=8% Similarity=-0.036 Sum_probs=86.0
Q ss_pred eeEeecCCCceeeE----EeeCCCc--eeeEEEccC-CcEEEEecCCCeEEEEECCCCCCCCeEEeCCC-----------
Q psy6446 2 GTVWDAVSGEELHS----FQHPHIV--KSSVHFATD-SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHS----------- 63 (134)
Q Consensus 2 i~v~d~~~~~~~~~----~~~~~~~--~~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~----------- 63 (134)
|+.||..++..... ....... .+.++|+|+ +.++++-..++.|+.|+.+.. ...+.++.
T Consensus 242 I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~ 318 (409)
T 3hrp_A 242 FGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLRE 318 (409)
T ss_dssp EEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGG
T ss_pred EEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCccc
Confidence 67788776653222 1111111 214999994 666666677889999987642 22233322
Q ss_pred ----CCEeEEEEeeCCCEEEEee-CCCcEEEEecCCCceeEEEec---------------CCCCeEEEEccCCcEEEEe-
Q psy6446 64 ----SGIKHVQFFKNNTRLISCA-EDKTVRLWDVSASAEVQKLEF---------------GAVPNSLEISRDGTTITVT- 122 (134)
Q Consensus 64 ----~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~- 122 (134)
.....++++|+++.+++-. .++.|+.|+..++........ -..+..+++++++.++++.
T Consensus 319 ~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~ 398 (409)
T 3hrp_A 319 EALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEA 398 (409)
T ss_dssp GCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEES
T ss_pred ccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEEC
Confidence 3478999999999777777 788999999877764433332 1346899999998777775
Q ss_pred cCCeEEEEeCC
Q psy6446 123 HGSCVTFLDAN 133 (134)
Q Consensus 123 ~~~~i~i~d~~ 133 (134)
.++.|+.++++
T Consensus 399 ~n~~Ir~i~~e 409 (409)
T 3hrp_A 399 WGKAIRKYAVE 409 (409)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCeEEEEEeC
Confidence 56899988764
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.06 E-value=3.6e-08 Score=66.23 Aligned_cols=130 Identities=15% Similarity=0.161 Sum_probs=82.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCC-------------eEEEEECCCCCCCCe-EEeC---CC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDK-------------NIRIYDLNKPDAEPT-VYRG---HS 63 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-------------~v~i~~~~~~~~~~~-~~~~---~~ 63 (134)
+|+++|+.+++.+...-.. .....++|+ |++.|+.++.+. .|++|++.+...... .+.. |.
T Consensus 156 ~i~v~dl~tg~~~~~~~~~-~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~ 233 (693)
T 3iuj_A 156 EIHLMDVESKQPLETPLKD-VKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQH 233 (693)
T ss_dssp EEEEEETTTCSEEEEEEEE-EESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGC
T ss_pred EEEEEECCCCCCCccccCC-ceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCC
Confidence 4789999999876532111 112348999 999998887763 499999987543222 2222 33
Q ss_pred CCEeEEEEeeCCCEEEEeeC----CCcEEEEecCCCc-eeEEEe-cCCCCeEEEEccCCcEEE-Eec----CCeEEEEeC
Q psy6446 64 SGIKHVQFFKNNTRLISCAE----DKTVRLWDVSASA-EVQKLE-FGAVPNSLEISRDGTTIT-VTH----GSCVTFLDA 132 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~-~~~----~~~i~i~d~ 132 (134)
.....+.|+||+++|+.... .+.+.++|+.++. ....+. ........ ++++|..++ .+. .+.|..+|+
T Consensus 234 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~ 312 (693)
T 3iuj_A 234 HRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDA 312 (693)
T ss_dssp CSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEET
T ss_pred eEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence 45788999999998864332 3579999987763 333443 33333343 666665544 442 268888887
Q ss_pred C
Q psy6446 133 N 133 (134)
Q Consensus 133 ~ 133 (134)
.
T Consensus 313 ~ 313 (693)
T 3iuj_A 313 A 313 (693)
T ss_dssp T
T ss_pred C
Confidence 5
No 212
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.06 E-value=1.2e-07 Score=56.88 Aligned_cols=127 Identities=7% Similarity=-0.070 Sum_probs=84.8
Q ss_pred eeEeecCCCceeeE-EeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHS-FQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|..||. +++.... +.........++++++++..++...++.+..|+. ++.........+...+..+++.++++.+++
T Consensus 164 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEe
Confidence 556776 5554432 1222233344999999987777777889999998 443211112234467899999999987666
Q ss_pred eeCCCcEEEEecCCCceeEEEec---CCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEF---GAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
...++.|..||. +++ ...+.. ...+.++.+ +++.++++...+.+..+|.+
T Consensus 242 ~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~ 294 (299)
T 2z2n_A 242 EWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLI 294 (299)
T ss_dssp ETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC
T ss_pred ccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcC
Confidence 667788999998 443 333332 356788999 88888777667788888765
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.05 E-value=6.2e-08 Score=58.70 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=77.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC----CCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG----HSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~ 77 (134)
|..||..+++. ..+.....+ .+++++++++++++. ++.|.+||..++... ..... ....+..+++.|+++.
T Consensus 37 i~~~d~~~~~~-~~~~~~~~~-~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~-~~~~~~~~~~~~~~~di~~d~dG~l 111 (297)
T 3g4e_A 37 VCRWDSFTKQV-QRVTMDAPV-SSVALRQSGGYVATI--GTKFCALNWKEQSAV-VLATVDNDKKNNRFNDGKVDPAGRY 111 (297)
T ss_dssp EEEEETTTCCE-EEEECSSCE-EEEEEBTTSSEEEEE--TTEEEEEETTTTEEE-EEEECCTTCSSEEEEEEEECTTSCE
T ss_pred EEEEECCCCcE-EEEeCCCce-EEEEECCCCCEEEEE--CCeEEEEECCCCcEE-EEEecCCCCCCCCCCCEEECCCCCE
Confidence 56778776654 334444444 459999999955543 567999998764421 11111 1234788999999997
Q ss_pred EEEeeCC---------CcEEEEecCC-CceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeC
Q psy6446 78 LISCAED---------KTVRLWDVSA-SAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDA 132 (134)
Q Consensus 78 l~~~~~d---------~~i~~~d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~ 132 (134)
+++.... ..-.+|.+.. ++.............++|+|+++.+..+ .++.|.+||+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 112 FAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp EEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred EEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 7654221 2234554432 3333333334456899999999876543 4689999986
No 214
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.05 E-value=1.3e-11 Score=77.10 Aligned_cols=126 Identities=10% Similarity=0.012 Sum_probs=62.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCC-CEe-EEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSS-GIK-HVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-~v~-~~~~~~~~~~l~ 79 (134)
|+.||..+|+.+..++. ..+.. ..+..++..+++++.|+.++.||..+++... ....+.. .+. ...+. ++..++
T Consensus 21 v~a~d~~tG~~~W~~~~-~~~~s-~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w-~~~~~~~~~~~~sp~~~-~~~~v~ 96 (369)
T 2hz6_A 21 LHAVSKRTGSIKWTLKE-DPVLQ-VPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT-KLPFTIPELVQASPCRS-SDGILY 96 (369)
T ss_dssp EEEEETTTCCEEEEEEC-CCSCC-CC-----CCEEECTTTCCEEEC-----CCSE-ECSCCHHHHHTTCSCC------CC
T ss_pred EEEEECCCCCEEEEecC-CCcee-cceEcCCCEEEEeCCCCEEEEEECCCCceee-eeeccCccccccCceEe-cCCEEE
Confidence 68899999999998887 44444 4455677788888899999999998766432 2221111 010 00111 345677
Q ss_pred EeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+++.++.+..||..+|+....+..... ..++|++..++++ .++.|+.||.++
T Consensus 97 ~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~t 149 (369)
T 2hz6_A 97 MGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKT 149 (369)
T ss_dssp CCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSS
T ss_pred EEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCC
Confidence 788899999999999998877654332 3445666666654 678999999764
No 215
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.04 E-value=5.3e-08 Score=65.38 Aligned_cols=132 Identities=11% Similarity=0.026 Sum_probs=92.1
Q ss_pred eeEeecCCCceeeEEee--C--------CCceeeEEEccCC---cEEEEecCCCeEEEEECCCCCCCCeEEeCC------
Q psy6446 2 GTVWDAVSGEELHSFQH--P--------HIVKSSVHFATDS---YRLATGSNDKNIRIYDLNKPDAEPTVYRGH------ 62 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~--~--------~~~~~~~~~~~~~---~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~------ 62 (134)
|..+|..+|+.+..++. + ...+. .....+| ..++.++.+|.++++|..+++.+.......
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l-~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMIL-ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEE-EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEE-EecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 67889999999998872 1 11222 3333467 678999999999999999876432211110
Q ss_pred ----CCCE------------------------eEEEEeeCCCEEEEeeC-------------------------------
Q psy6446 63 ----SSGI------------------------KHVQFFKNNTRLISCAE------------------------------- 83 (134)
Q Consensus 63 ----~~~v------------------------~~~~~~~~~~~l~~~~~------------------------------- 83 (134)
...+ ..++++|+...++....
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 0001 25688888877766432
Q ss_pred ------------CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 84 ------------DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 84 ------------d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.+.|..||+.+++.+.......++....+...+..++.+ .+|.+++||.+|
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 267999999999999988877766666677777666655 689999999875
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.03 E-value=9.8e-08 Score=58.62 Aligned_cols=124 Identities=15% Similarity=0.091 Sum_probs=78.5
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC-----CCCEeEEEEeeCCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH-----SSGIKHVQFFKNNT 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~ 76 (134)
|..||..+++. ..+..... +.++.++++++++++. . ..+.+||..++.. ..+... ...+..+.++|+++
T Consensus 73 i~~~d~~~~~~-~~~~~~~~-v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~--~~~~~~~~~~~~~~~~~i~~d~~G~ 146 (326)
T 2ghs_A 73 LHELHLASGRK-TVHALPFM-GSALAKISDSKQLIAS-D-DGLFLRDTATGVL--TLHAELESDLPGNRSNDGRMHPSGA 146 (326)
T ss_dssp EEEEETTTTEE-EEEECSSC-EEEEEEEETTEEEEEE-T-TEEEEEETTTCCE--EEEECSSTTCTTEEEEEEEECTTSC
T ss_pred EEEEECCCCcE-EEEECCCc-ceEEEEeCCCeEEEEE-C-CCEEEEECCCCcE--EEEeeCCCCCCCCCCCCEEECCCCC
Confidence 56788776654 33444433 4459999999877765 3 3589999876542 122211 23578999999998
Q ss_pred EEEEeeC------CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 77 RLISCAE------DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
.+++... .+.|..++ +++.............++|+|+++.+..+ .++.|.+||+.
T Consensus 147 l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 147 LWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred EEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 7765432 24455555 44433322333456789999999876544 35899999864
No 217
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.02 E-value=5.3e-08 Score=62.05 Aligned_cols=130 Identities=12% Similarity=0.040 Sum_probs=88.3
Q ss_pred eeEeecCCCceeeEEe-eCCC---ceeeEEEccCCcEEEEec-------------------CCCeEEEEECCCCCCCCeE
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHI---VKSSVHFATDSYRLATGS-------------------NDKNIRIYDLNKPDAEPTV 58 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~l~~~~-------------------~d~~v~i~~~~~~~~~~~~ 58 (134)
|.++|..+.+.+.+++ .... ... +.|+|+++.+++.. ....|.+||+.+.+. ...
T Consensus 166 v~vlD~~T~~v~~~~~~~~~~~~~~Yd-~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~-~~t 243 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEIDRGDQYLAYD-FWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR-IHS 243 (462)
T ss_dssp EEEECTTTCCEEEECCSBCTTCCCCCC-EEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE-EEE
T ss_pred EEEEECCCCeEEEEEccCCCCccccce-EEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE-eeE
Confidence 6789999999998887 2222 233 78899999888874 368999999987532 233
Q ss_pred EeC--CCCCEeEEEE--eeCCCEEEEeeC------CCcEEEEecCCCcee--EEE--ec-----------------CCCC
Q psy6446 59 YRG--HSSGIKHVQF--FKNNTRLISCAE------DKTVRLWDVSASAEV--QKL--EF-----------------GAVP 107 (134)
Q Consensus 59 ~~~--~~~~v~~~~~--~~~~~~l~~~~~------d~~i~~~d~~~~~~~--~~~--~~-----------------~~~v 107 (134)
+.. .......+.| +|++++++.+.+ +++|.+|....++.. ..+ .. ....
T Consensus 244 I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce
Confidence 332 1134556666 899998876664 567877665543311 111 00 2346
Q ss_pred eEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 108 NSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 108 ~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
..+.+++||++|.++ ..+.|.+||+.
T Consensus 324 a~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 789999999999876 35899999973
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.00 E-value=6.4e-08 Score=58.82 Aligned_cols=126 Identities=12% Similarity=0.090 Sum_probs=81.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC-----CCCEeEEEEeeCCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH-----SSGIKHVQFFKNNT 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~ 76 (134)
|..|+. +++ ...+.........+.++++|+++++...++.|..|+.. +. . ..+..+ ...+..+.+.|+++
T Consensus 69 i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~-~-~~~~~~~~~~~~~~~~~i~~d~dG~ 143 (305)
T 3dr2_A 69 VLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ-A-HLLVGRYAGKRLNSPNDLIVARDGA 143 (305)
T ss_dssp EEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-E-EEEECEETTEECSCCCCEEECTTSC
T ss_pred EEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC-E-EEEEeccCCCccCCCCCEEECCCCC
Confidence 456765 444 33444344445559999999977776667889999875 33 2 222111 13467899999999
Q ss_pred EEEE----eeC-------------CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cC------CeEEEEeC
Q psy6446 77 RLIS----CAE-------------DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HG------SCVTFLDA 132 (134)
Q Consensus 77 ~l~~----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~------~~i~i~d~ 132 (134)
.+++ +.. .+.|..+|..+++..... .......++|+|+++.+..+ .. +.|.+||+
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~ 222 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAW 222 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEE
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEe
Confidence 8886 332 245777887666654433 33456789999999876654 33 68999886
Q ss_pred C
Q psy6446 133 N 133 (134)
Q Consensus 133 ~ 133 (134)
.
T Consensus 223 ~ 223 (305)
T 3dr2_A 223 R 223 (305)
T ss_dssp E
T ss_pred c
Confidence 4
No 219
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.00 E-value=8.4e-08 Score=64.53 Aligned_cols=132 Identities=11% Similarity=0.074 Sum_probs=89.1
Q ss_pred eeEeecCCCceeeEEeeC-C---------CceeeEEEccCCc---EEEEecCCCeEEEEECCCCCCCCeEEeCC------
Q psy6446 2 GTVWDAVSGEELHSFQHP-H---------IVKSSVHFATDSY---RLATGSNDKNIRIYDLNKPDAEPTVYRGH------ 62 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~---~l~~~~~d~~v~i~~~~~~~~~~~~~~~~------ 62 (134)
|..+|..+|+.+..++.. . ..+. .....+|+ .++.++.+|.++++|..+++.+.......
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l-~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMIL-AELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEE-EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEE-EeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 678999999999988731 1 1111 22223565 78899999999999998876431110000
Q ss_pred ---------------------C-----------CCEeEEEEeeCCCEEEEeeC---------------------------
Q psy6446 63 ---------------------S-----------SGIKHVQFFKNNTRLISCAE--------------------------- 83 (134)
Q Consensus 63 ---------------------~-----------~~v~~~~~~~~~~~l~~~~~--------------------------- 83 (134)
. ..-..++++|+...++....
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 0 00123678887777665421
Q ss_pred ------------------CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 84 ------------------DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 84 ------------------d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.+..||+.+++.+.......+.....+...+.+++.+ .|+.|+.||.+|
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCC
Confidence 367999999999999988877666555666666666665 689999999875
No 220
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.99 E-value=1.2e-07 Score=56.68 Aligned_cols=122 Identities=13% Similarity=0.144 Sum_probs=78.9
Q ss_pred CceeeEEeeCCCc-eeeEEEccCCcEEEEecC--CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe-eCCC
Q psy6446 10 GEELHSFQHPHIV-KSSVHFATDSYRLATGSN--DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC-AEDK 85 (134)
Q Consensus 10 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~ 85 (134)
.+.+.++.+.... ..-+.|++++.+..+.+. ++.|+++|+.+++.......+.......+++ +++.++.. -.++
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~~~ 86 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETTCS
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEecCC
Confidence 4567777766543 344999998755444443 5799999999876443222222222233444 45566544 4578
Q ss_pred cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 86 TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 86 ~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.+.++|..+.+.+..+... ......+++||..++.+ .++.|.++|.++
T Consensus 87 ~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t 135 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHT 135 (266)
T ss_dssp EEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTT
T ss_pred EEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCC
Confidence 9999999999999988765 22334456677655554 568999999864
No 221
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.99 E-value=1.1e-07 Score=56.59 Aligned_cols=128 Identities=13% Similarity=0.090 Sum_probs=88.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEe-cCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATG-SNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|+++|+.+++.+..+.-....+. ....++++.|... -.++.+.++|..+.+... .+... . ....+.++++.|+
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~Fg-eGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~-ti~~~-~--eG~glt~dg~~L~ 140 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRYFG-EGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR-SFNYD-G--EGWGLTHNDQYLI 140 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTCCE-EEEEEETTEEEEEESSSSEEEEEETTTCCEEE-EEECS-S--CCCCEEECSSCEE
T ss_pred eEEEEECCCCcEEEEEecCCccce-eEEEEeCCEEEEEEeeCCEEEEEECccCcEEE-EEECC-C--CceEEecCCCEEE
Confidence 378999999999998885555443 4444455565554 457899999998866443 33322 1 3344556888888
Q ss_pred EeeCCCcEEEEecCCCceeEEEecC---CC---CeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEFG---AV---PNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~~---~~---v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.+..++.|.++|..+.+....+... .+ ++.+.|. +|+..+.. .++.|.+.|.+|
T Consensus 141 ~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 141 MSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp ECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTT
T ss_pred EECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCC
Confidence 7777888999999999988887642 22 3457776 67655555 468888888764
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.97 E-value=3.3e-08 Score=59.90 Aligned_cols=98 Identities=9% Similarity=0.092 Sum_probs=71.8
Q ss_pred eeEEEccCCcEEE-EecCCCeEEEEECC--CCCCC-CeEE---eCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc
Q psy6446 24 SSVHFATDSYRLA-TGSNDKNIRIYDLN--KPDAE-PTVY---RGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA 96 (134)
Q Consensus 24 ~~~~~~~~~~~l~-~~~~d~~v~i~~~~--~~~~~-~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 96 (134)
..++|+|+++.++ +.+.++.|..|+++ ++... ...+ ..+.+.+..+++.++++..++....+.|..||..+++
T Consensus 152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 3499999998764 45667899999874 32211 0111 2233567899999999888887778889999998899
Q ss_pred eeEEEecC-CCCeEEEEc-cCCcEEEE
Q psy6446 97 EVQKLEFG-AVPNSLEIS-RDGTTITV 121 (134)
Q Consensus 97 ~~~~~~~~-~~v~~~~~~-~~~~~l~~ 121 (134)
....+... ..+.+++|. |+++.|.+
T Consensus 232 ~~~~i~~p~~~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 232 RLQTVKLPVDKTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp EEEEEECSSSBEEEEEEESGGGCEEEE
T ss_pred EEEEEECCCCCceEEEEeCCCCCEEEE
Confidence 88888765 578999998 88776554
No 223
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.97 E-value=1.2e-07 Score=57.45 Aligned_cols=127 Identities=10% Similarity=0.074 Sum_probs=80.2
Q ss_pred eeEeecCCCceeeEEe-----eCCCceeeEEEccC-CcEEEEecCCCeEEEEECCCCCCCCeE-Ee---C-CCCCEeEEE
Q psy6446 2 GTVWDAVSGEELHSFQ-----HPHIVKSSVHFATD-SYRLATGSNDKNIRIYDLNKPDAEPTV-YR---G-HSSGIKHVQ 70 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~---~-~~~~v~~~~ 70 (134)
|.+||..+++...... +...+. .+.++++ ++++++.. .+.|.+||.. +.. ... .. . ....+..++
T Consensus 48 i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~ 123 (314)
T 1pjx_A 48 ILRIDLKTGKKTVICKPEVNGYGGIPA-GCQCDRDANQLFVADM-RLGLLVVQTD-GTF-EEIAKKDSEGRRMQGCNDCA 123 (314)
T ss_dssp EEEECTTTCCEEEEECCEETTEECCEE-EEEECSSSSEEEEEET-TTEEEEEETT-SCE-EECCSBCTTSCBCBCCCEEE
T ss_pred EEEEeCCCCcEEEEEecccCCCCCCCc-eEEEecCCCcEEEEEC-CCCEEEEeCC-CCE-EEEEeccCCCccccCCcCEE
Confidence 6778877777543222 223334 4999998 76555554 4478889987 432 111 11 1 123578999
Q ss_pred EeeCCCEEEEeeCC---------------CcEEEEecCCCceeEEEecCCCCeEEEEc----cCCcEEEEe--cCCeEEE
Q psy6446 71 FFKNNTRLISCAED---------------KTVRLWDVSASAEVQKLEFGAVPNSLEIS----RDGTTITVT--HGSCVTF 129 (134)
Q Consensus 71 ~~~~~~~l~~~~~d---------------~~i~~~d~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~--~~~~i~i 129 (134)
+.++++.+++...+ +.|..+|.. ++.............++++ |+++.+..+ .++.|.+
T Consensus 124 ~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~ 202 (314)
T 1pjx_A 124 FDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWS 202 (314)
T ss_dssp ECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEE
Confidence 99999887776554 567777765 5544333334456889999 999755443 4689999
Q ss_pred EeCC
Q psy6446 130 LDAN 133 (134)
Q Consensus 130 ~d~~ 133 (134)
||++
T Consensus 203 ~~~~ 206 (314)
T 1pjx_A 203 YDIK 206 (314)
T ss_dssp EEEE
T ss_pred EECC
Confidence 9853
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.95 E-value=1.7e-08 Score=67.74 Aligned_cols=109 Identities=16% Similarity=0.209 Sum_probs=73.7
Q ss_pred ceeeEEEccCCcEEEE-----ecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCC-----------
Q psy6446 22 VKSSVHFATDSYRLAT-----GSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDK----------- 85 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~-----~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------- 85 (134)
.+..+.|||||++|+. |+.+..|+++|+.+++.....+.. .....++|+ |++.|+.+..+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 3455899999999884 333457999999987633221211 113578899 999998877663
Q ss_pred --cEEEEecCCCce--eEEEecC----CCCeEEEEccCCcEEEEe--c---CCeEEEEeCC
Q psy6446 86 --TVRLWDVSASAE--VQKLEFG----AVPNSLEISRDGTTITVT--H---GSCVTFLDAN 133 (134)
Q Consensus 86 --~i~~~d~~~~~~--~~~~~~~----~~v~~~~~~~~~~~l~~~--~---~~~i~i~d~~ 133 (134)
.|.+|++.++.. ...+... .....+.|+|||++++.. . .+.|+++|+.
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 267 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLS 267 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETT
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECC
Confidence 399999887653 2222222 235788999999988653 2 2589999874
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.95 E-value=1.4e-07 Score=62.00 Aligned_cols=129 Identities=12% Similarity=0.036 Sum_probs=93.3
Q ss_pred eeEeecCCCceeeEEee--CCCceeeEEE-c-cCCcEEEEec------------------CCCeEEEEECCCCCCCCeEE
Q psy6446 2 GTVWDAVSGEELHSFQH--PHIVKSSVHF-A-TDSYRLATGS------------------NDKNIRIYDLNKPDAEPTVY 59 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~l~~~~------------------~d~~v~i~~~~~~~~~~~~~ 59 (134)
|.+.|+.+.++.+.++- ...... +++ + |+++++++++ .++.+.+.|..+.+...+..
T Consensus 114 VavIdl~t~~~~~ii~ip~g~~phg-~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~ 192 (595)
T 1fwx_A 114 VARVRCDVMKCDAILEIPNAKGIHG-LRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL 192 (595)
T ss_dssp EEEEETTTTEEEEEEECSSCCSEEE-EEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCceEeeEEeCCCCCCCcc-eeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEE
Confidence 67889999998886652 233334 776 5 8999998884 24578899988754333322
Q ss_pred eCCCCCEeEEEEeeCCCEEEEeeCCC--------------------------------------cEEEEecCC--Cce-e
Q psy6446 60 RGHSSGIKHVQFFKNNTRLISCAEDK--------------------------------------TVRLWDVSA--SAE-V 98 (134)
Q Consensus 60 ~~~~~~v~~~~~~~~~~~l~~~~~d~--------------------------------------~i~~~d~~~--~~~-~ 98 (134)
.+ +....++++|+++++++.+.+. .+.+.|..+ ++. .
T Consensus 193 Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~ 270 (595)
T 1fwx_A 193 VS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFT 270 (595)
T ss_dssp ES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSE
T ss_pred eC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeE
Confidence 22 2457788999999988777543 477778877 445 5
Q ss_pred EEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 99 QKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 99 ~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
..++......++.++|||++++++ .+.+|.++|++
T Consensus 271 ~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 271 RYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp EEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred EEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 667777778899999999998876 46899999986
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.94 E-value=1.8e-08 Score=64.09 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=76.7
Q ss_pred cCCcEEEEecCC-----CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee----------CCCcEEEEecCC
Q psy6446 30 TDSYRLATGSND-----KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA----------EDKTVRLWDVSA 94 (134)
Q Consensus 30 ~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~ 94 (134)
++++.+++.... +.|.++|..+.+.......+. .+ .+.++||+++++.+. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 466766665442 699999999866543333333 33 899999999888765 367899999999
Q ss_pred CceeEEEecC--------CCCeEEEEccCCcEEEEe-c--CCeEEEEeCCC
Q psy6446 95 SAEVQKLEFG--------AVPNSLEISRDGTTITVT-H--GSCVTFLDANS 134 (134)
Q Consensus 95 ~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~-~--~~~i~i~d~~t 134 (134)
++....+... .....+.++|||++++++ . ++.|.+.|+.+
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 9998888653 346789999999988875 2 57899999864
No 227
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.93 E-value=8.5e-08 Score=62.99 Aligned_cols=129 Identities=15% Similarity=0.056 Sum_probs=92.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCC--------------------------------------e
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDK--------------------------------------N 43 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--------------------------------------~ 43 (134)
+.+.|..+.+.+.++.-....-. ++++|+|+++++.+.+. .
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~-~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDN-CDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCC-EEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCCCccc-eEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 67889999999999884335555 88999999998887543 3
Q ss_pred EEEEECCC--CCCCCeEEeCCCCCEeEEEEeeCCCEEEEee-CCCcEEEEecCCCc------------eeEEEecCCCCe
Q psy6446 44 IRIYDLNK--PDAEPTVYRGHSSGIKHVQFFKNNTRLISCA-EDKTVRLWDVSASA------------EVQKLEFGAVPN 108 (134)
Q Consensus 44 v~i~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~------------~~~~~~~~~~v~ 108 (134)
|.+.|..+ +........ -.....++.++|||++++..+ .+..+.++|+.+.+ ............
T Consensus 256 V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp EEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred EEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 66777766 322112222 224567899999999887655 57889999998653 334444566789
Q ss_pred EEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 109 SLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 109 ~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
.++|+|+| .+.++ -+++|.+||+.
T Consensus 335 h~aF~~dG-~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 335 HTAFDGRG-NAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp EEEECTTS-EEEEEETTTTEEEEEEHH
T ss_pred eEEECCCC-eEEEEEecCCcEEEEEhh
Confidence 99999999 55443 58999999974
No 228
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.92 E-value=9.6e-07 Score=53.00 Aligned_cols=127 Identities=10% Similarity=0.030 Sum_probs=85.0
Q ss_pred eeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
|.+||.. ++... +. ........++++++++..++...++.|..+|.. +.............+..+++.++++.++
T Consensus 43 v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v 119 (300)
T 2qc5_A 43 ISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWF 119 (300)
T ss_dssp EEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred EEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEE
Confidence 5567765 44432 32 122334448899999888877778889999977 3322111122346789999999998888
Q ss_pred EeeCCCcEEEEecCCCceeEE-Ee-cCCCCeEEEEccCCcEEEEec-CCeEEEEeC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQK-LE-FGAVPNSLEISRDGTTITVTH-GSCVTFLDA 132 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~ 132 (134)
+...++.|..+|.. ++.... +. ....+..++++++++++++.. ++.|..+|.
T Consensus 120 ~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 120 TQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp EETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 77778889999987 544322 11 235678999999998666654 678888875
No 229
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.90 E-value=8.8e-07 Score=53.16 Aligned_cols=128 Identities=6% Similarity=-0.048 Sum_probs=82.9
Q ss_pred eeEeecCCCceeeE-EeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHS-FQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|..+|.. ++.... +.........+.+.++++..++...++.|..++. ++.............+..+.+.++++.+++
T Consensus 127 i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~ 204 (300)
T 2qc5_A 127 IGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFV 204 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEE
T ss_pred EEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEE
Confidence 4556655 444321 1222333445899999987777666788999988 333221111233456889999998887776
Q ss_pred eeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
....+.|..+|. +++...... ....+.+++++++|.+.++. .++.|..||.
T Consensus 205 ~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 205 EIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp ETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred ccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 666778999998 444333211 23457899999999877766 4588988875
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.90 E-value=3.4e-07 Score=54.44 Aligned_cols=117 Identities=13% Similarity=0.192 Sum_probs=82.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC-CC---CCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-HS---SGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~---~~v~~~~~~~~~~~ 77 (134)
+.+||..+.+.+.++...... ..+.++++.|+.+..++.+.++|..+.+........ .. ..++.+.|. +++.
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~l 184 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEI 184 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECccCcEEEEEECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEE
Confidence 679999999999999854433 233357788887777788999998876543322211 11 334567776 6766
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEecC-------------CCCeEEEEccCCcEEEEe
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLEFG-------------AVPNSLEISRDGTTITVT 122 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~ 122 (134)
.+..-.++.|.+.|..+++....+... .-.+.++++|+++.+.++
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 666667889999999999999888742 234889999988666554
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.87 E-value=3.9e-07 Score=54.29 Aligned_cols=117 Identities=9% Similarity=0.003 Sum_probs=82.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe-CCC---CCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR-GHS---SGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~---~~v~~~~~~~~~~~ 77 (134)
+.+||..+.+.+.++........ ++ ++++.|+.+..++.+.++|..+.+....... .+. ..++.+.|. +++.
T Consensus 118 v~V~D~~Tl~~~~ti~~~~eGwG-Lt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGEGWG-LC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEEEETTTTEEEEEEECSSCCCC-EE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCCCceeE-Ee--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 67999999999999985443333 44 5688888887789999999888654332211 121 234667776 7765
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEecC--------------CCCeEEEEccCCcE-EEEe
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLEFG--------------AVPNSLEISRDGTT-ITVT 122 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~-l~~~ 122 (134)
.+....++.|.+.|..+++....+... .-.+.++++|++.. +++|
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 555556789999999999998888732 23489999998754 4455
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.87 E-value=1.2e-06 Score=51.63 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=86.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|+++|+.+++.+..+.-+...+. ....+.++.|. ..-.++.+.++|..+.+... .+... . ....+.++++.|+
T Consensus 44 ~v~~vD~~tgkv~~~~~l~~~~fg-eGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~-ti~~~-~--~Gwglt~dg~~L~ 118 (243)
T 3mbr_X 44 SVRKVDLETGRILQRAEVPPPYFG-AGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA-RFRYP-G--EGWALTSDDSHLY 118 (243)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCE-EEEEEETTEEEEEESSSSEEEEEETTTTEEEE-EEECS-S--CCCEEEECSSCEE
T ss_pred eEEEEECCCCCEEEEEeCCCCcce-eEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE-EEeCC-C--CceEEeeCCCEEE
Confidence 378999999999998885555443 33334445554 44567899999998865443 33322 2 2244456788887
Q ss_pred EeeCCCcEEEEecCCCceeEEEecC------CCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEFG------AVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.+..++.|.++|..+.+....+... ..++.+.+. +|+..+.. .+..|.+.|.++
T Consensus 119 vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 119 MSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp EECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred EECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence 7777889999999999988887742 234556665 66655544 467888888764
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=5.1e-07 Score=55.81 Aligned_cols=130 Identities=11% Similarity=0.135 Sum_probs=83.1
Q ss_pred eeEeecCCCceeeEEeeCC------CceeeEEEccCCcEE-EEec---CCCeEEEEECCCCCCCCeEEeCC---------
Q psy6446 2 GTVWDAVSGEELHSFQHPH------IVKSSVHFATDSYRL-ATGS---NDKNIRIYDLNKPDAEPTVYRGH--------- 62 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l-~~~~---~d~~v~i~~~~~~~~~~~~~~~~--------- 62 (134)
|.+||+.+++.+..+..+. .....+++++++..+ ++.. .++.|.+||+.++.. ...+.+|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~-~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA-ARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-EEECTTCTTTSCCSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-EEEecCCCcccccccc
Confidence 6789999998877776321 122448999865444 5544 578999999876431 1111111
Q ss_pred --------------------CCCEeEEEEeeCCCEEEEeeCCC-cEEEEecC---CCc--------eeEEEecCCCCeEE
Q psy6446 63 --------------------SSGIKHVQFFKNNTRLISCAEDK-TVRLWDVS---ASA--------EVQKLEFGAVPNSL 110 (134)
Q Consensus 63 --------------------~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~---~~~--------~~~~~~~~~~v~~~ 110 (134)
...+..++++|+++.|+.+...+ .+..++.. .+. .+...........+
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgi 253 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGI 253 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCE
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceE
Confidence 12368899999999888777665 45444432 110 11222233456789
Q ss_pred EEccCCcEEEEe-cCCeEEEEeC
Q psy6446 111 EISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 111 ~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
+++++|.++++. .++.|.+||.
T Consensus 254 a~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EECTTCCEEEEEGGGTEEEEEET
T ss_pred EECCCCCEEEEccCCCeEEEEEC
Confidence 999999887776 5689999997
No 234
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.84 E-value=1.1e-06 Score=54.02 Aligned_cols=98 Identities=12% Similarity=0.116 Sum_probs=68.2
Q ss_pred eeeEEEccCCcEEEEe-cCCCeEEEEECC--CC-CCC-CeEE---eCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCC
Q psy6446 23 KSSVHFATDSYRLATG-SNDKNIRIYDLN--KP-DAE-PTVY---RGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~-~~d~~v~i~~~~--~~-~~~-~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 94 (134)
...++|+|+++.++.+ +.++.|.+|++. ++ ... ...+ ......+..+.+.++++.+++...++.|..||. +
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~ 259 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D 259 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-C
Confidence 3449999999876544 567899999986 43 211 1122 123455778999999987777767788999998 5
Q ss_pred CceeEEEecC-CCCeEEEEc-cCCcEEEE
Q psy6446 95 SAEVQKLEFG-AVPNSLEIS-RDGTTITV 121 (134)
Q Consensus 95 ~~~~~~~~~~-~~v~~~~~~-~~~~~l~~ 121 (134)
++....+... ..+.+++|+ +++..|.+
T Consensus 260 g~~~~~i~~~~~~~~~~af~g~d~~~L~v 288 (326)
T 2ghs_A 260 GNHIARYEVPGKQTTCPAFIGPDASRLLV 288 (326)
T ss_dssp CCEEEEEECSCSBEEEEEEESTTSCEEEE
T ss_pred CCEEEEEECCCCCcEEEEEecCCCCEEEE
Confidence 6666666644 458899998 88776544
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.82 E-value=2.6e-10 Score=71.25 Aligned_cols=127 Identities=13% Similarity=0.051 Sum_probs=63.6
Q ss_pred CeeEeecCCCceeeEEeeCC--CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPH--IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
.|+.||..+|+.+...+... ....+..+. .+..+++++.++.++.||..+++.... +..+. ...++|++..+
T Consensus 60 ~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~-~~~~~----~~~~~p~~~~v 133 (369)
T 2hz6_A 60 SLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQT-LSSAF----ADSLSPSTSLL 133 (369)
T ss_dssp CEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------E
T ss_pred EEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEE-ecCCC----cccccccCCEE
Confidence 36789988888876665221 111111111 345678888899999999998765432 32222 23456688889
Q ss_pred EEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccC----CcEEEEecCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRD----GTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~~~i~i~d~~t 134 (134)
++++.++.+..||..+++....+.... .....++++ +..++.+.+|.|..||.++
T Consensus 134 ~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 134 YLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp EEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred EEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 999999999999999998776654221 122223332 4555566789999998753
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.82 E-value=3.3e-08 Score=61.80 Aligned_cols=88 Identities=5% Similarity=-0.050 Sum_probs=68.5
Q ss_pred eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee----------CCCcEEEEecCCCceeEEEecC--------
Q psy6446 43 NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA----------EDKTVRLWDVSASAEVQKLEFG-------- 104 (134)
Q Consensus 43 ~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~~~~~~~~~~-------- 104 (134)
.+.++|..+.+.......+. .+ .+.++||+++++.+. .++.|.++|..+++....+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 88899998876554443444 34 799999999988775 3678999999999999998754
Q ss_pred CCCeEEEEccCCcEEEEe--c-CCeEEE--EeCC
Q psy6446 105 AVPNSLEISRDGTTITVT--H-GSCVTF--LDAN 133 (134)
Q Consensus 105 ~~v~~~~~~~~~~~l~~~--~-~~~i~i--~d~~ 133 (134)
.....+.++|||++++++ . +..+.+ +|+.
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 357899999999888765 2 467888 8864
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.82 E-value=1.1e-06 Score=51.74 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=81.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe-CCC---CCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR-GHS---SGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~---~~v~~~~~~~~~~~ 77 (134)
+.+||..+.+.+.++........ + .+++..|+.+..++.|.++|..+.+....... .+. ..++.+.+. +++.
T Consensus 87 v~v~D~~tl~~~~ti~~~~~Gwg-l--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEGWA-L--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCCCE-E--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCCCCceE-E--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 67999999999999985544333 3 45677787777788999999988654322211 111 244566665 6665
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEecC--------------CCCeEEEEccCCcEEEEe
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLEFG--------------AVPNSLEISRDGTTITVT 122 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~ 122 (134)
.+..-.+..|.+.|..+++....+... .-.+.++++|++..|.++
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 656656789999999999999888732 134789999987655543
No 238
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.73 E-value=5.1e-06 Score=49.59 Aligned_cols=118 Identities=10% Similarity=0.121 Sum_probs=81.1
Q ss_pred ceeeEEeeCCCce-eeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE-eeCCCcEE
Q psy6446 11 EELHSFQHPHIVK-SSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS-CAEDKTVR 88 (134)
Q Consensus 11 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~ 88 (134)
+.+.++.|....+ ..+.|+ ++.+..+.+.+|.|+.+|+.+++..... -..........++++.|.. .-.++.+.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME---RLGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE---ECTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE---CCCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 3456666555443 447776 4666777788899999999997765443 2234444334445555544 44678999
Q ss_pred EEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 89 LWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 89 ~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++|..+.+.+.++.....-..++ +++..|+.+ .++.|+++|.+|
T Consensus 120 V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T 164 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDG 164 (268)
T ss_dssp EEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTT
T ss_pred EEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCC
Confidence 99999999999998765545555 557666655 578999999764
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.70 E-value=7.4e-06 Score=52.48 Aligned_cols=132 Identities=15% Similarity=0.132 Sum_probs=85.6
Q ss_pred eeEeecCC-----CceeeEEe--eCCCceeeEEE-----------c--cCCcEEEE-ecCCCeEEEEECCCCCCCCeEEe
Q psy6446 2 GTVWDAVS-----GEELHSFQ--HPHIVKSSVHF-----------A--TDSYRLAT-GSNDKNIRIYDLNKPDAEPTVYR 60 (134)
Q Consensus 2 i~v~d~~~-----~~~~~~~~--~~~~~~~~~~~-----------~--~~~~~l~~-~~~d~~v~i~~~~~~~~~~~~~~ 60 (134)
|.+.|+.. ++.+..+. .......-..| + +++++|++ +-.++.|+++|+.+........+
T Consensus 45 la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k 124 (462)
T 2ece_A 45 IAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIK 124 (462)
T ss_dssp EEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEE
T ss_pred EEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeee
Confidence 44566665 66777665 21212222445 5 66777655 55678999999875432222222
Q ss_pred CC----------CCCEeEEEEeeCCCEEEEeeCC------CcEEEEecCCCceeEEEecC----CCCeEEEEccCCcEEE
Q psy6446 61 GH----------SSGIKHVQFFKNNTRLISCAED------KTVRLWDVSASAEVQKLEFG----AVPNSLEISRDGTTIT 120 (134)
Q Consensus 61 ~~----------~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~ 120 (134)
.- ......+...|++ .++++..+ +.+.+.|..+.+.+..+... ..-..+-|+|+++.++
T Consensus 125 ~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mv 203 (462)
T 2ece_A 125 VIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLV 203 (462)
T ss_dssp EECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEE
T ss_pred eechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEE
Confidence 11 1234567788999 66655444 68999999999998888643 1234578899999888
Q ss_pred Eec--------------------CCeEEEEeCCC
Q psy6446 121 VTH--------------------GSCVTFLDANS 134 (134)
Q Consensus 121 ~~~--------------------~~~i~i~d~~t 134 (134)
++. +++|.+||+.+
T Consensus 204 sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 204 SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred EccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 874 68999999863
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.67 E-value=3.6e-06 Score=51.29 Aligned_cols=123 Identities=14% Similarity=0.109 Sum_probs=81.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
|..+|.. ++....+........++...+++. +..++.++.+..+|.. +... ..+......+..+...+++..++..
T Consensus 119 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~-~~~~~~~~~~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 119 LYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEK-WRFKTNDAITSAASIGKDGTIYFGS 194 (330)
T ss_dssp EEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEE-EEEECSSCCCSCCEECTTCCEEEES
T ss_pred EEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEe-EEEecCCCceeeeEEcCCCEEEEEe
Confidence 5567776 777776665545555467766665 6667777889999987 4432 2333344556666666666654443
Q ss_pred eCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 82 AEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
+.+..+| .+++....... ...+.++..+++|...+.+.++.|..+|.
T Consensus 195 ---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 195 ---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP 242 (330)
T ss_dssp ---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT
T ss_pred ---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC
Confidence 7788898 67766655553 35577888888887777777777777764
No 241
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.65 E-value=7.3e-07 Score=60.60 Aligned_cols=108 Identities=14% Similarity=0.078 Sum_probs=71.0
Q ss_pred eeeEEEc-cCCcEEEEecC-C----CeEEEEECCCC-CCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCC-----CcEEEE
Q psy6446 23 KSSVHFA-TDSYRLATGSN-D----KNIRIYDLNKP-DAEPTVYRGHSSGIKHVQFFKNNTRLISCAED-----KTVRLW 90 (134)
Q Consensus 23 ~~~~~~~-~~~~~l~~~~~-d----~~v~i~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~ 90 (134)
.....|| |||++|+.+.. + ..|+++|+.++ ......+. .....+.|+||++.|+....+ ..|..+
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 4558999 99998875432 2 35999999887 53221121 123578899999988766654 257888
Q ss_pred ecCCCcee--EEEec--CCCCeEEEEccCCcEEEEec----CCeEEEEeCC
Q psy6446 91 DVSASAEV--QKLEF--GAVPNSLEISRDGTTITVTH----GSCVTFLDAN 133 (134)
Q Consensus 91 d~~~~~~~--~~~~~--~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~ 133 (134)
++.++... ..+.. ......+.|+|||++|+... ...|.++|+.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 88776422 22222 23346788999999887542 3578888875
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.64 E-value=2.4e-06 Score=53.25 Aligned_cols=123 Identities=11% Similarity=0.037 Sum_probs=80.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe-CCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR-GHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~ 80 (134)
+..+|..+|+.+....... ...+.. ++..++.++.++.+..+|..+++... ... ........... .+..++.
T Consensus 251 l~~~d~~tG~~~w~~~~~~--~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w-~~~~~~~~~~~~~~~--~~~~l~v 323 (376)
T 3q7m_A 251 LTALDLRSGQIMWKRELGS--VNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLW-TQSDLLHRLLTSPVL--YNGNLVV 323 (376)
T ss_dssp EEEEETTTCCEEEEECCCC--EEEEEE--ETTEEEEEETTCCEEEEETTTCCEEE-EECTTTTSCCCCCEE--ETTEEEE
T ss_pred EEEEECCCCcEEeeccCCC--CCCceE--ECCEEEEEcCCCeEEEEECCCCcEEE-eecccCCCcccCCEE--ECCEEEE
Confidence 5678888898887765322 221333 46678888888999999998876432 222 11122223333 3567888
Q ss_pred eeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEecCCeEEEEe
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVTHGSCVTFLD 131 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~i~i~d 131 (134)
++.+|.+..+|..+++....... ...+.......++.+++.+.+|.|..||
T Consensus 324 ~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 324 GDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 88999999999999998887765 3333222222356666667889999887
No 243
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.64 E-value=1.8e-06 Score=53.41 Aligned_cols=113 Identities=7% Similarity=0.018 Sum_probs=72.6
Q ss_pred CCceeeEEEccCCcEEEEecC--CCeEEEEECCCCCCC-----CeEEeCCCCCEeEEEEeeCCCEEEEeeC-----CCcE
Q psy6446 20 HIVKSSVHFATDSYRLATGSN--DKNIRIYDLNKPDAE-----PTVYRGHSSGIKHVQFFKNNTRLISCAE-----DKTV 87 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i 87 (134)
..... ++++++|+.+++... ++.+++|.+..+... ......+-..+..+++.++++.+++-.. ++.|
T Consensus 17 ~~p~~-va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGN-ITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEE-EEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcce-EEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 34445 999999998888532 342444444332110 0001134467899999999876655433 5789
Q ss_pred EEEecCCCceeEEEecC-------CCCeEEEEccCCcEE-EEe----cCCeEEEEeCC
Q psy6446 88 RLWDVSASAEVQKLEFG-------AVPNSLEISRDGTTI-TVT----HGSCVTFLDAN 133 (134)
Q Consensus 88 ~~~d~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l-~~~----~~~~i~i~d~~ 133 (134)
.+||+.+++....+... ..+..+++++++..+ ++. .++.|.+||+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 99999998877766532 345899999865444 443 35899999975
No 244
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=1.4e-05 Score=51.05 Aligned_cols=129 Identities=8% Similarity=0.037 Sum_probs=78.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC-CC----eEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN-DK----NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NN 75 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~----~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 75 (134)
|+.+|+.+++............. ++|+++++.|+++.. ++ .+...+..........+. .......++++| ++
T Consensus 161 I~~id~~~~~v~~~~~~~~~P~~-ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g 238 (430)
T 3tc9_A 161 TRLIDFEKEYVSTVYSGLSKVRT-ICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPING 238 (430)
T ss_dssp EEEEETTTTEEEEEECCCSCEEE-EEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTC
T ss_pred EEEEECCCCEEEEEecCCCCcce-EEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCC
Confidence 56778776555444443344445 999999996666543 22 344444332211112222 234467888999 66
Q ss_pred CEEEEeeCCCcEEEEecCCCceeEEEec--CCCCeEEEEccCCcEEEEe--cCCeEEEEeC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTTITVT--HGSCVTFLDA 132 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~ 132 (134)
..+++-..++.|..++...+........ ......++|+|++++|..+ ..+.|..++.
T Consensus 239 ~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 239 ELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 6666666778899999876654333332 2357899999999965544 4688888764
No 245
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.62 E-value=8e-06 Score=50.91 Aligned_cols=128 Identities=8% Similarity=0.047 Sum_probs=79.4
Q ss_pred eeEeecCCCceeeEEeeCC---------CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPH---------IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFF 72 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~ 72 (134)
|..+|..+|+.+..+.... ..+. .....++..+++++.++.+..+|..+++... ..............
T Consensus 65 v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W-~~~~~~~~~~~p~~- 141 (376)
T 3q7m_A 65 VKALNADDGKEIWSVSLAEKDGWFSKEPALLS-GGVTVSGGHVYIGSEKAQVYALNTSDGTVAW-QTKVAGEALSRPVV- 141 (376)
T ss_dssp EEEEETTTCCEEEEEECCC---CCSCCCCCEE-EEEEEETTEEEEEETTSEEEEEETTTCCEEE-EEECSSCCCSCCEE-
T ss_pred EEEEEccCCceeeeecCccccccccccCcccc-cCceEeCCEEEEEcCCCEEEEEECCCCCEEE-EEeCCCceEcCCEE-
Confidence 6788999999988877421 1222 1222246678888889999999998876432 22222211112222
Q ss_pred eCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCC------eEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 73 KNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP------NSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 73 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v------~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
.+..++.++.++.+..+|..+++..........+ ...... ++..++.+.++.+..+|.++
T Consensus 142 -~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~t 207 (376)
T 3q7m_A 142 -SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQ 207 (376)
T ss_dssp -ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEETTT
T ss_pred -ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCC
Confidence 2457778888999999999999988877654332 122222 34444444678888888753
No 246
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.61 E-value=7.1e-06 Score=54.26 Aligned_cols=133 Identities=10% Similarity=-0.023 Sum_probs=83.5
Q ss_pred eeEeecCCCceeeEEeeCC-------Cceee--EEEccCCc---EEEEecCCCeEEEEECCCCCCCCeEEeCC-------
Q psy6446 2 GTVWDAVSGEELHSFQHPH-------IVKSS--VHFATDSY---RLATGSNDKNIRIYDLNKPDAEPTVYRGH------- 62 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~---~l~~~~~d~~v~i~~~~~~~~~~~~~~~~------- 62 (134)
|..+|..+|+.+..++... ....- ....++|+ .++.++.+|.++++|..+++.........
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~ 353 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK 353 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccccc
Confidence 6778999999999887221 11111 22224674 57788899999999998876432211111
Q ss_pred -----CCCE--------------------------eEEEEeeCCCEEEEee-----------------------------
Q psy6446 63 -----SSGI--------------------------KHVQFFKNNTRLISCA----------------------------- 82 (134)
Q Consensus 63 -----~~~v--------------------------~~~~~~~~~~~l~~~~----------------------------- 82 (134)
..++ ..++++|+...++...
T Consensus 354 ~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 433 (571)
T 2ad6_A 354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP 433 (571)
T ss_dssp ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred ccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceecc
Confidence 0011 2456777766665432
Q ss_pred --------CCCcEEEEecCCCceeEEEecCCCCeEEEEccCC-cEEEEecCCeEEEEeCCC
Q psy6446 83 --------EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDG-TTITVTHGSCVTFLDANS 134 (134)
Q Consensus 83 --------~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~i~i~d~~t 134 (134)
.++.+..+|..+++..........+....+...+ ..++.+.++.|+.+|.++
T Consensus 434 ~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 434 GPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp CTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred CccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCC
Confidence 3478999999999998888765554443333334 444445789999999864
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.58 E-value=9.3e-06 Score=54.65 Aligned_cols=132 Identities=11% Similarity=0.069 Sum_probs=85.5
Q ss_pred eeEeecCCCceeeEEeeC----------CCceeeEEEccCCc---EEEEecCCCeEEEEECCCCCCCCeEEeCC------
Q psy6446 2 GTVWDAVSGEELHSFQHP----------HIVKSSVHFATDSY---RLATGSNDKNIRIYDLNKPDAEPTVYRGH------ 62 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~----------~~~~~~~~~~~~~~---~l~~~~~d~~v~i~~~~~~~~~~~~~~~~------ 62 (134)
|..+|..+|+.+..++.. ...+. ..+..+|+ .++.++.+|.++++|..+++.+.......
T Consensus 272 v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~-~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 272 ILAIRPDTGKLAWHYQVTPGDSWDFTATQQITL-AELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCEEE-EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred EEEEcCCCCceeeEeecCCCccccccCCCCcEE-EEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 678899999999988732 11122 23334665 68899999999999998876431110000
Q ss_pred ----C-CC------------------------EeEEEEeeCCCEEEEe--------------------------------
Q psy6446 63 ----S-SG------------------------IKHVQFFKNNTRLISC-------------------------------- 81 (134)
Q Consensus 63 ----~-~~------------------------v~~~~~~~~~~~l~~~-------------------------------- 81 (134)
. .+ -..++++|+...++..
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD 430 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence 0 00 0126677765554431
Q ss_pred ----eCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 82 ----AEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 82 ----~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
..++.|..||..+++...............+...+.+++.+ .++.++.||.++
T Consensus 431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 431 VPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp CCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred CCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 12377999999999998888776665555555566666655 689999999864
No 248
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.57 E-value=1.3e-05 Score=54.13 Aligned_cols=101 Identities=11% Similarity=0.058 Sum_probs=69.6
Q ss_pred eeEeecCCCceeeEEeeCCCc--------------------------------eeeEEEccCCcEEEEecCCC-------
Q psy6446 2 GTVWDAVSGEELHSFQHPHIV--------------------------------KSSVHFATDSYRLATGSNDK------- 42 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~l~~~~~d~------- 42 (134)
|+.+|..+|+.+..+...... ...+.++|++..++.+..++
T Consensus 192 v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~ 271 (677)
T 1kb0_A 192 ITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKV 271 (677)
T ss_dssp EEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHH
T ss_pred EEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCC
Confidence 678999999999888732111 12367888888888887664
Q ss_pred ------------eEEEEECCCCCCCCeEEeC-CC-------CCEeEEEEeeCC---CEEEEeeCCCcEEEEecCCCceeE
Q psy6446 43 ------------NIRIYDLNKPDAEPTVYRG-HS-------SGIKHVQFFKNN---TRLISCAEDKTVRLWDVSASAEVQ 99 (134)
Q Consensus 43 ------------~v~i~~~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~---~~l~~~~~d~~i~~~d~~~~~~~~ 99 (134)
.|..+|.++++........ |. .....+....++ ..++.++.+|.+.++|..+++.+.
T Consensus 272 ~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~ 351 (677)
T 1kb0_A 272 RSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFIS 351 (677)
T ss_dssp HSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred CCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEec
Confidence 4888999887644322211 21 122333444477 678899999999999999999887
Q ss_pred EEe
Q psy6446 100 KLE 102 (134)
Q Consensus 100 ~~~ 102 (134)
...
T Consensus 352 ~~~ 354 (677)
T 1kb0_A 352 AKN 354 (677)
T ss_dssp EEE
T ss_pred ccc
Confidence 665
No 249
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.52 E-value=3.1e-05 Score=48.11 Aligned_cols=129 Identities=9% Similarity=0.214 Sum_probs=83.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEcc----CCc---EEEEecC---CCeEEEEECCCCCCCCeEEeC------CC-C
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFAT----DSY---RLATGSN---DKNIRIYDLNKPDAEPTVYRG------HS-S 64 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~---d~~v~i~~~~~~~~~~~~~~~------~~-~ 64 (134)
+.+||+ +|+.++.+.. ..... +..-| .|+ ++++... ++.+.+|+++........... .. .
T Consensus 52 L~Vydl-~G~~l~~~~~-g~~nn-VD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~ 128 (355)
T 3amr_A 52 LVVYSL-DGKMLHSYNT-GKLNN-VDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAIN 128 (355)
T ss_dssp EEEEET-TSCEEEEECC-SCEEE-EEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCS
T ss_pred EEEEcC-CCcEEEEccC-CCccc-EEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCC
Confidence 679999 7999888864 33333 55544 232 2333333 578999977432222222211 11 4
Q ss_pred CEeEEEE--eeC-CC-EEEEeeCCCcEEEEecC-------CCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 65 GIKHVQF--FKN-NT-RLISCAEDKTVRLWDVS-------ASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 65 ~v~~~~~--~~~-~~-~l~~~~~d~~i~~~d~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
.+..+++ +|. ++ +++....++.+..|++. +.+.++.+...+.+..+..++....|..+ .+..|..||.
T Consensus 129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEEC
T ss_pred CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeC
Confidence 5667777 563 43 57788888999999883 34567778788889999999887777776 5666877774
Q ss_pred C
Q psy6446 133 N 133 (134)
Q Consensus 133 ~ 133 (134)
+
T Consensus 209 ~ 209 (355)
T 3amr_A 209 E 209 (355)
T ss_dssp S
T ss_pred C
Confidence 3
No 250
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.42 E-value=6.6e-05 Score=49.87 Aligned_cols=133 Identities=15% Similarity=0.046 Sum_probs=79.8
Q ss_pred eeEeecCCCceeeEEee--CC-----CceeeEEEc---cCCc---EEEEecCCCeEEEEECCCCCCCCeEEeCC------
Q psy6446 2 GTVWDAVSGEELHSFQH--PH-----IVKSSVHFA---TDSY---RLATGSNDKNIRIYDLNKPDAEPTVYRGH------ 62 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~--~~-----~~~~~~~~~---~~~~---~l~~~~~d~~v~i~~~~~~~~~~~~~~~~------ 62 (134)
|..+|..+|+.+..++. +. ....-+.+. .+|+ .++.++.+|.++++|..+++.+.......
T Consensus 293 v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 372 (582)
T 1flg_A 293 QVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWAS 372 (582)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEE
T ss_pred EEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccc
Confidence 56789999999998873 21 111112222 4663 68889999999999998865432111110
Q ss_pred ------CCC--------------------------------EeEEEEeeCCCEEEEee----------------------
Q psy6446 63 ------SSG--------------------------------IKHVQFFKNNTRLISCA---------------------- 82 (134)
Q Consensus 63 ------~~~--------------------------------v~~~~~~~~~~~l~~~~---------------------- 82 (134)
..+ -..++++|+...++...
T Consensus 373 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g 452 (582)
T 1flg_A 373 HIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLG 452 (582)
T ss_dssp EECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred cccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceec
Confidence 000 01345555444443321
Q ss_pred -----------CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEE-EecCCeEEEEeCCC
Q psy6446 83 -----------EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTIT-VTHGSCVTFLDANS 134 (134)
Q Consensus 83 -----------~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~i~i~d~~t 134 (134)
.++.|..||+.+++.+.......+...-.....+.+++ .+.|+.++.||.+|
T Consensus 453 ~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~t 516 (582)
T 1flg_A 453 MGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKS 516 (582)
T ss_dssp EEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTT
T ss_pred cceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCC
Confidence 25789999999999988877654443322223344444 44789999999864
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.38 E-value=3.6e-05 Score=46.86 Aligned_cols=123 Identities=11% Similarity=0.091 Sum_probs=75.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
|..+|.. ++.+..+......+.++...+++...+ ++ +.+..+| .++... .........+.++...+++. +..+
T Consensus 159 l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~-~~~~~~~~~~~~~~~~~~g~-l~v~ 231 (330)
T 3hxj_A 159 LYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEK-WNFYAGYWTVTRPAISEDGT-IYVT 231 (330)
T ss_dssp EEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEE-EEECCSSCCCSCCEECTTSC-EEEE
T ss_pred EEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEE-EEEccCCcceeceEECCCCe-EEEE
Confidence 4567777 777777765445555577777776444 44 6788888 443322 22333345567777766654 4555
Q ss_pred eCCCcEEEEecCCCceeEEEecC-CCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 82 AEDKTVRLWDVSASAEVQKLEFG-AVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
+.++.+..+|. +++........ ..+..+...+++...+++.+|.|..+|.
T Consensus 232 t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 232 SLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp ETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred cCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC
Confidence 66777777773 55555555533 2344566666777666666777887774
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.35 E-value=9.4e-05 Score=45.25 Aligned_cols=128 Identities=15% Similarity=0.098 Sum_probs=77.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEe-cCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATG-SNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
|..+|..+++............. ++++|+++.|+.+ ...+.|..+++..... ....+....+ ...+++.++|+.++
T Consensus 167 v~~~d~~~~~~~~~~~~~~~p~g-ia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~v 244 (322)
T 2fp8_A 167 LIKYDPSTKETTLLLKELHVPGG-AEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWV 244 (322)
T ss_dssp EEEEETTTTEEEEEEEEESCCCE-EEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEE
T ss_pred EEEEeCCCCEEEEeccCCccCcc-eEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEE
Confidence 44556555543322222223334 8999999866655 5568999999875321 1112222233 78899999998766
Q ss_pred EeeC----------CCcEEEEecCCCceeEEEecC-----CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAE----------DKTVRLWDVSASAEVQKLEFG-----AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~----------d~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+... .+.|..+|. .++.+..+... ..+..+++ .++++++++ ..+.|..+++.
T Consensus 245 a~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 245 SSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred EecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 6544 456888886 46666666532 24566666 456655554 56899998874
No 253
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.30 E-value=0.00015 Score=48.41 Aligned_cols=132 Identities=9% Similarity=-0.011 Sum_probs=79.8
Q ss_pred eeEeecCCCceeeEEeeCCC----------ceeeEEEc-cCC---cEEEEecCCCeEEEEECCCCCCCCeEEeCC-----
Q psy6446 2 GTVWDAVSGEELHSFQHPHI----------VKSSVHFA-TDS---YRLATGSNDKNIRIYDLNKPDAEPTVYRGH----- 62 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~----------~~~~~~~~-~~~---~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~----- 62 (134)
|..+|..+|+.+..++.... .+. +... .+| ..++.++.+|.++++|..+++.+.......
T Consensus 280 v~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~ 358 (599)
T 1w6s_A 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVF 358 (599)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccc
Confidence 56789999999998873211 111 2222 467 567778999999999998876432211000
Q ss_pred ------CC-CE--------------------------eEEEEeeCCCEEEEe----------------------------
Q psy6446 63 ------SS-GI--------------------------KHVQFFKNNTRLISC---------------------------- 81 (134)
Q Consensus 63 ------~~-~v--------------------------~~~~~~~~~~~l~~~---------------------------- 81 (134)
.+ ++ ..++++|+...++..
T Consensus 359 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (599)
T 1w6s_A 359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (599)
T ss_dssp EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred cccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccccee
Confidence 00 00 234566654444331
Q ss_pred -----e------CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEE-EecCCeEEEEeCCC
Q psy6446 82 -----A------EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTIT-VTHGSCVTFLDANS 134 (134)
Q Consensus 82 -----~------~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~i~i~d~~t 134 (134)
+ .++.+..||+.+++.+.......+...-.+...+..++ .+.|+.++.||.+|
T Consensus 439 ~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 439 YPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDT 503 (599)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCC
Confidence 1 34789999999999888877654433222233344444 45789999999864
No 254
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.28 E-value=0.00019 Score=46.04 Aligned_cols=129 Identities=10% Similarity=0.042 Sum_probs=75.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC---Ce-EEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND---KN-IRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNT 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~-v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 76 (134)
|+.+|..+++............. ++++++++++++.... .. +...+..........+. .......+++.| ++.
T Consensus 164 I~~id~~~g~v~~~~~~~~~P~g-iavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~ 241 (433)
T 4hw6_A 164 FRHVDFVNQYVDIKTTNIGQCAD-VNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGK 241 (433)
T ss_dssp EEEEETTTTEEEEECCCCSCEEE-EEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCC
T ss_pred EEEEECCCCEEEEeecCCCCccE-EEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCe
Confidence 67778776665544433333444 9999999944443321 12 33333222111111221 234567788999 666
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEE-ecC--CCCeEEEEccCCcEEEEe--cCCeEEEEeC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKL-EFG--AVPNSLEISRDGTTITVT--HGSCVTFLDA 132 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~-~~~--~~v~~~~~~~~~~~l~~~--~~~~i~i~d~ 132 (134)
..++-..++.|..+|..++.....+ ... .....++++|++.+|..+ ..+.|..++.
T Consensus 242 lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 242 IYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp EEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred EEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 6666667788999998877652322 221 223469999999855544 4588988774
No 255
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.28 E-value=3.1e-05 Score=52.84 Aligned_cols=129 Identities=10% Similarity=0.083 Sum_probs=74.8
Q ss_pred eeEeecCCC-ceee-EEeeCCCceeeEEEccCCcEEEEecCC-----CeEEEEECCCCCCCC-eEEe-CCCCCEeEEEEe
Q psy6446 2 GTVWDAVSG-EELH-SFQHPHIVKSSVHFATDSYRLATGSND-----KNIRIYDLNKPDAEP-TVYR-GHSSGIKHVQFF 72 (134)
Q Consensus 2 i~v~d~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~-~~~~-~~~~~v~~~~~~ 72 (134)
|+++|+.++ +.+. .+.. ....+.|+||++.|+....+ ..|+.+++.++.... ..+. ........+.|+
T Consensus 203 l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~S 279 (751)
T 2xe4_A 203 IEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA 279 (751)
T ss_dssp EEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEEC
T ss_pred EEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEEC
Confidence 788898888 6322 1211 23348999999888776654 367888887653221 2222 223446788999
Q ss_pred eCCCEEEEeeC---CCcEEEEecCCCc-ee--EEEec--CCCCeEEEEccCCcEEEEe-cC----CeEEEEeCC
Q psy6446 73 KNNTRLISCAE---DKTVRLWDVSASA-EV--QKLEF--GAVPNSLEISRDGTTITVT-HG----SCVTFLDAN 133 (134)
Q Consensus 73 ~~~~~l~~~~~---d~~i~~~d~~~~~-~~--~~~~~--~~~v~~~~~~~~~~~l~~~-~~----~~i~i~d~~ 133 (134)
||+++|+.... ...+.++|+.++. .. ..+.. ......+.|+..+.+++.+ .+ ..|..+|+.
T Consensus 280 pDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 280 ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp TTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 99999875543 3458888987652 22 22221 2333445544444444444 22 367666653
No 256
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.27 E-value=0.00013 Score=43.44 Aligned_cols=130 Identities=8% Similarity=0.003 Sum_probs=77.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.++|...+.....+.........+++++++..|+ +-...+.|.+++++... ..............++++|++..++.
T Consensus 60 I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~i~vd~~~g~lyv 138 (267)
T 1npe_A 60 IGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTGLVNPRGIVTDPVRGNLYW 138 (267)
T ss_dssp EEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEE
T ss_pred EEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECCCCCccEEEEeeCCCEEEE
Confidence 45666654433322222212233489998655554 54567889999987532 21222222256789999997666554
Q ss_pred eeC---CCcEEEEecCCCceeEEEe-c-CCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 81 CAE---DKTVRLWDVSASAEVQKLE-F-GAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~---d~~i~~~d~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
+.. .+.|..+++.. .....+. . ......++++|++..|..+ ..+.|.++|+.
T Consensus 139 ~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 139 TDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 443 36788888754 3333332 1 2356889999987665543 45899999874
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.21 E-value=0.00021 Score=43.67 Aligned_cols=107 Identities=12% Similarity=0.034 Sum_probs=67.5
Q ss_pred eeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeC-----CCCCEeEEEEee-CCCEEEEeeC-------------
Q psy6446 24 SSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-----HSSGIKHVQFFK-NNTRLISCAE------------- 83 (134)
Q Consensus 24 ~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~------------- 83 (134)
..+++.+ +++ |+++...+.+..+|..++.. ..+.. .......+++.+ +++..++-..
T Consensus 83 ~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 83 YDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHA--TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp EEEEEETTTTE-EEEEETTTEEEEECTTCEEC--EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred ceEEEcCCCCc-EEEEECCCCEEEEeCCCCEE--EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 3488887 555 55444445578888764321 12211 113468899999 8877665432
Q ss_pred ----CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 84 ----DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 84 ----d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
++.+..+|..+++.............++++|++..+..+ ..+.|.+|++.
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred ccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 356888887766543333333456789999999866554 45899999875
No 258
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.18 E-value=6.3e-05 Score=49.83 Aligned_cols=79 Identities=14% Similarity=0.090 Sum_probs=52.7
Q ss_pred CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCC--eEEEEccCCcE
Q psy6446 41 DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP--NSLEISRDGTT 118 (134)
Q Consensus 41 d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v--~~~~~~~~~~~ 118 (134)
++.+..+|+.+++...+. . +...+....+...+..++.++.|+.+..+|.++++.+..+.....+ ..+.+..+|+.
T Consensus 443 ~g~l~a~D~~tG~~~W~~-~-~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTK-W-EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CEEEEEECTTTCCEEEEE-E-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCeEEEEECCCCCEEEEe-c-CCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEE
Confidence 578899999887644322 2 1222333333445677788899999999999999999988865433 33445578875
Q ss_pred EEE
Q psy6446 119 ITV 121 (134)
Q Consensus 119 l~~ 121 (134)
++.
T Consensus 521 yv~ 523 (571)
T 2ad6_A 521 YIG 523 (571)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 259
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.18 E-value=0.00037 Score=46.90 Aligned_cols=109 Identities=15% Similarity=0.081 Sum_probs=69.6
Q ss_pred EEEcc-CCcEEEEecCCC-----------eEEEEECCCCCCCC-eEE-eCCCCCEeEEEEeeCCCEEEEeeC-CCcEEEE
Q psy6446 26 VHFAT-DSYRLATGSNDK-----------NIRIYDLNKPDAEP-TVY-RGHSSGIKHVQFFKNNTRLISCAE-DKTVRLW 90 (134)
Q Consensus 26 ~~~~~-~~~~l~~~~~d~-----------~v~i~~~~~~~~~~-~~~-~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~ 90 (134)
.++.+ +++.++.|+.+. .+.+||..+..-.. ... ..+......+++.++++.++.|+. +..+.+|
T Consensus 191 ~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~y 270 (656)
T 1k3i_A 191 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLY 270 (656)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEE
T ss_pred EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEe
Confidence 67777 888888876432 57889988754221 112 223333345677788999888884 4579999
Q ss_pred ecCCCceeEEEe--cCCCCeEEEEccCCcEEEEec--C-----CeEEEEeCCC
Q psy6446 91 DVSASAEVQKLE--FGAVPNSLEISRDGTTITVTH--G-----SCVTFLDANS 134 (134)
Q Consensus 91 d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~--~-----~~i~i~d~~t 134 (134)
|..+.+....-. ....-.++...++++.++.|+ + ..+.+||.++
T Consensus 271 d~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 271 DSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 988765433221 122224566777888888764 2 4789999753
No 260
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.00049 Score=44.91 Aligned_cols=129 Identities=10% Similarity=0.037 Sum_probs=76.8
Q ss_pred eeEeecCCCceeeEEeeCC----CceeeEEE-------ccCCcEEEEecCCC-------eEEEEECCCCCCCC-----eE
Q psy6446 2 GTVWDAVSGEELHSFQHPH----IVKSSVHF-------ATDSYRLATGSNDK-------NIRIYDLNKPDAEP-----TV 58 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~----~~~~~~~~-------~~~~~~l~~~~~d~-------~v~i~~~~~~~~~~-----~~ 58 (134)
|++.|+.++.......... .... ++| +++++.|+++...+ .+.+++........ ..
T Consensus 164 i~~ID~~~~~v~~l~~~~~~~~~~p~~-ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~ 242 (496)
T 3kya_A 164 IQLIDLKNRMLSSPLNINTIPTNRIRS-IAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQL 242 (496)
T ss_dssp EEEEETTTTEEEEEECCTTSSCSBEEE-EEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEE
T ss_pred EEEEECCCCEEEEEEccCccccCCCcE-EEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeeccccee
Confidence 5677777666554443221 2344 999 99998666665443 26666544311111 22
Q ss_pred EeCCCCCEeEEEEeeCCCE-EEEeeCCCcEEEEecC-------CCce-----------eEE-Eec--CCCCeEEEEccCC
Q psy6446 59 YRGHSSGIKHVQFFKNNTR-LISCAEDKTVRLWDVS-------ASAE-----------VQK-LEF--GAVPNSLEISRDG 116 (134)
Q Consensus 59 ~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~-------~~~~-----------~~~-~~~--~~~v~~~~~~~~~ 116 (134)
+.. ......++++|++.. +++-..++.|..+|+. ++.. ... +.. ......++|+|+|
T Consensus 243 v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G 321 (496)
T 3kya_A 243 IAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTG 321 (496)
T ss_dssp EEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTS
T ss_pred ecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCC
Confidence 221 234567888995544 5556677889999987 4443 112 222 3446899999999
Q ss_pred cEEEEe--cCCeEEEEeC
Q psy6446 117 TTITVT--HGSCVTFLDA 132 (134)
Q Consensus 117 ~~l~~~--~~~~i~i~d~ 132 (134)
.+|..+ ..+.|+.++.
T Consensus 322 ~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 322 KYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp SEEEEEETTTTEEEEEEE
T ss_pred CEEEEEeCCCCEEEEEec
Confidence 965544 4588888653
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.10 E-value=0.00012 Score=48.67 Aligned_cols=78 Identities=12% Similarity=0.058 Sum_probs=52.9
Q ss_pred CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCe--EEEEccCCcE
Q psy6446 41 DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPN--SLEISRDGTT 118 (134)
Q Consensus 41 d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~--~~~~~~~~~~ 118 (134)
+|.+..||+.+++..-+.... .++..-.....+..++.++.|+.++.+|.++++.+..+.....+. -+.+..+|+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 578889999887644322211 222222223356778889999999999999999999988765543 3677788864
Q ss_pred EE
Q psy6446 119 IT 120 (134)
Q Consensus 119 l~ 120 (134)
.+
T Consensus 543 Yv 544 (582)
T 1flg_A 543 YL 544 (582)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 262
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.10 E-value=3.1e-05 Score=52.36 Aligned_cols=77 Identities=13% Similarity=0.128 Sum_probs=56.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
|..||+.+|+.+..++....... ..+...+.+++.++.|+.++.||.++++.+.....++.....-+.|..+|+..+
T Consensus 457 l~A~D~~tG~~~W~~~~~~~~~~-g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 457 LIAWDPVKQQAAWEVPYVTIFNG-GTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp EEEEETTTTEEEEEEEESSSCCC-CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EEEEECCCCCeEeEccCCCCccC-ccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 67899999999999986655544 455667889999999999999999998765433333333335577778886544
No 263
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.06 E-value=0.00041 Score=41.22 Aligned_cols=108 Identities=9% Similarity=-0.017 Sum_probs=66.6
Q ss_pred eeEEEccCCcEEEEecC---CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE-eeCCCcEEEEecCCCceeE
Q psy6446 24 SSVHFATDSYRLATGSN---DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS-CAEDKTVRLWDVSASAEVQ 99 (134)
Q Consensus 24 ~~~~~~~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~ 99 (134)
..++++|++..|+.+.. .+.|..++++... ..............+++++++..|+. -...+.|..+|........
T Consensus 125 ~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 203 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK 203 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE
T ss_pred cEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE
Confidence 34899996655554443 4688888876432 21122233356789999998776654 4456789999987554433
Q ss_pred EEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 100 KLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 100 ~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
..........++.. ++..+++. .++.|..+|..
T Consensus 204 ~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 204 VLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 33333344567654 34444444 45899999875
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.04 E-value=0.00053 Score=42.04 Aligned_cols=131 Identities=11% Similarity=-0.006 Sum_probs=80.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEE-EEecCCCeEEEEECCCC---CCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRL-ATGSNDKNIRIYDLNKP---DAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
|+..|+.+.+....+........ ++|++.++.| .+-..++.|..+++... ..........-.....+++.+.+..
T Consensus 12 I~~i~~~~~~~~~~~~~~~~p~g-~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ 90 (316)
T 1ijq_A 12 VRKMTLDRSEYTSLIPNLRNVVA-LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN 90 (316)
T ss_dssp EEEEETTSCCCEEEECSCSSEEE-EEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTE
T ss_pred EEEEECCCcceEehhcCCCceEE-EEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCe
Confidence 67788877766555554455555 9999865554 45556789999998751 2222222222245688999875554
Q ss_pred E-EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEE-Ee-cC-CeEEEEeCC
Q psy6446 78 L-ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTIT-VT-HG-SCVTFLDAN 133 (134)
Q Consensus 78 l-~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~~-~~-~~i~i~d~~ 133 (134)
| ++-...+.|.+.+........... .......++++|.+..|. +. .. +.|...++.
T Consensus 91 ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 91 IYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp EEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 4 455667889999987544333333 235678999998665544 33 33 678877653
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.03 E-value=0.00054 Score=41.65 Aligned_cols=120 Identities=13% Similarity=0.062 Sum_probs=74.1
Q ss_pred CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCC--cE
Q psy6446 10 GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDK--TV 87 (134)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i 87 (134)
.+.+..+........ ++|+++++.+++-..++.|..+|.... ..... .....+..+++.++++.+++..... .+
T Consensus 22 ~~~~~~~p~~~~peg-ia~~~~g~lyv~d~~~~~I~~~d~~g~--~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 22 AKIITSFPVNTFLEN-LASAPDGTIFVTNHEVGEIVSITPDGN--QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPV 97 (306)
T ss_dssp EEEEEEECTTCCEEE-EEECTTSCEEEEETTTTEEEEECTTCC--EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred ceEeEeCCCCCCcce-EEECCCCCEEEEeCCCCeEEEECCCCc--eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceE
Confidence 344555543334444 999999987777778899999987652 22222 2345688999999998666554332 46
Q ss_pred EEEecCCCceeEEEecC--CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 88 RLWDVSASAEVQKLEFG--AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 88 ~~~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
..+|..+++........ .....++..+++..+++. .++.|..+|..
T Consensus 98 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp EEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETT
T ss_pred EEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCC
Confidence 77777777654333321 223455555555555554 46888888864
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.00 E-value=0.00077 Score=42.52 Aligned_cols=130 Identities=9% Similarity=-0.054 Sum_probs=78.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEE-EEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE-E
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRL-ATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL-I 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 79 (134)
|+..++..+.....+........ ++|++.+..| .+-...+.|..+++.... ..............+++.+.+..| +
T Consensus 98 I~~i~~~~~~~~~~~~~~~~~~g-l~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~~~~~~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 98 IRQVLPHRSEYTLLLNNLENAIA-LDFHHRRELVFWSDVTLDRILRANLNGSN-VEEVVSTGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp EEEECTTSCCCEEEECSCSCEEE-EEEETTTTEEEEEETTTTEEEEEETTSCC-EEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred ceeeccCCCcEEEEecCCCccEE-EEEecCCCeEEEEeCCCCcEEEEecCCCC-cEEEEeCCCCCccEEEEEeCCCeEEE
Confidence 45566655444444444444555 9999755544 555567889999987643 222222223456788998755554 4
Q ss_pred EeeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEe--cC-CeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVT--HG-SCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~--~~-~~i~i~d~~ 133 (134)
+-...+.|.+.++........+.. ......++++|.+..|..+ .. +.|..+++.
T Consensus 176 ~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 176 TDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp EETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 555567888888765443333322 2456899999877655543 34 678877754
No 267
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.00 E-value=0.0004 Score=46.93 Aligned_cols=131 Identities=11% Similarity=0.096 Sum_probs=79.7
Q ss_pred eeEeecCCCceeeEEeeCC-----CceeeEEEccCCcEEEEecC------CCeEEEEECCCCCCCCeEEeC--C------
Q psy6446 2 GTVWDAVSGEELHSFQHPH-----IVKSSVHFATDSYRLATGSN------DKNIRIYDLNKPDAEPTVYRG--H------ 62 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~------d~~v~i~~~~~~~~~~~~~~~--~------ 62 (134)
|..+|..+|+.+..++... ........ .+..++++.. ++.+..+|..+++........ .
T Consensus 129 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~ 206 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYE 206 (668)
T ss_dssp EEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCS
T ss_pred EEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccc
Confidence 5778999999998887421 11111122 2345555543 589999999887644322110 0
Q ss_pred ----------------------CCCEeEEEEeeCCCEEEEeeCCC-------------------cEEEEecCCCceeEEE
Q psy6446 63 ----------------------SSGIKHVQFFKNNTRLISCAEDK-------------------TVRLWDVSASAEVQKL 101 (134)
Q Consensus 63 ----------------------~~~v~~~~~~~~~~~l~~~~~d~-------------------~i~~~d~~~~~~~~~~ 101 (134)
......+++.|+...++.+..++ .|..+|..+++....+
T Consensus 207 ~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~ 286 (668)
T 1kv9_A 207 HPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHY 286 (668)
T ss_dssp SHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE
T ss_pred ccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEe
Confidence 01112467888778887776665 3999999999998887
Q ss_pred ecC----------CCCeEEEEccCCc---EEEEe-cCCeEEEEeCCC
Q psy6446 102 EFG----------AVPNSLEISRDGT---TITVT-HGSCVTFLDANS 134 (134)
Q Consensus 102 ~~~----------~~v~~~~~~~~~~---~l~~~-~~~~i~i~d~~t 134 (134)
... .+.....+..+|+ .++.+ .+|.++++|.++
T Consensus 287 ~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 333 (668)
T 1kv9_A 287 QVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN 333 (668)
T ss_dssp ESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred ecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC
Confidence 642 1222222334664 44444 679999998754
No 268
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=0.0012 Score=42.39 Aligned_cols=106 Identities=14% Similarity=0.122 Sum_probs=66.8
Q ss_pred eEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeC-CC----cEEEEecCCCcee
Q psy6446 25 SVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAE-DK----TVRLWDVSASAEV 98 (134)
Q Consensus 25 ~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~~~d~~~~~~~ 98 (134)
.++++| ++..|+++...+.|+.+|+.... . ..+.........++++++++.|+.+.. ++ .+...+. .+...
T Consensus 141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~-v-~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~ 217 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEY-V-STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFK 217 (430)
T ss_dssp EEEEETTEEEEEEEEEBTEEEEEEETTTTE-E-EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSC
T ss_pred EEEECCCCCCeEEEEeCCCcEEEEECCCCE-E-EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCcee
Confidence 388997 45566666555788889987643 2 233334566899999999996665543 22 2333432 33222
Q ss_pred --EEEecCCCCeEEEEcc-CCcEEEEe-cCCeEEEEeCC
Q psy6446 99 --QKLEFGAVPNSLEISR-DGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 99 --~~~~~~~~v~~~~~~~-~~~~l~~~-~~~~i~i~d~~ 133 (134)
..+........++++| ++.++++. .++.|..+|..
T Consensus 218 ~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 218 VITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp SEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred eeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 3333345568899999 66666665 56899998864
No 269
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.84 E-value=0.0015 Score=40.24 Aligned_cols=131 Identities=10% Similarity=0.007 Sum_probs=78.5
Q ss_pred eeEeecCCCc--eeeEEeeCCCceeeEEEccC-CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC-E
Q psy6446 2 GTVWDAVSGE--ELHSFQHPHIVKSSVHFATD-SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT-R 77 (134)
Q Consensus 2 i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 77 (134)
|+..|+.... ....+......+. +.|++. +..+.+-...+.|..++++............-.....+++.+.+. .
T Consensus 15 I~~i~l~~~~~~~~~~~~~~~~~~~-ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~l 93 (318)
T 3sov_A 15 LRLVDATNGKENATIVVGGLEDAAA-VDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKL 93 (318)
T ss_dssp EEEEETTCTTSCCEEEEEEEEEEEE-EEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEE
T ss_pred EEEEECCCCceEEEEEecCCCccEE-EEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeE
Confidence 5677776553 2222333334444 899985 445555566788999998765322223333334567899987554 4
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe--c-CCeEEEEeCC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT--H-GSCVTFLDAN 133 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~-~~~i~i~d~~ 133 (134)
.++-...+.|.++++.......... .......++++|.+..|..+ . .+.|...++.
T Consensus 94 y~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 94 YWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 4555567789999986543332222 23456889999876555543 2 4677777653
No 270
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.79 E-value=0.0018 Score=40.06 Aligned_cols=109 Identities=8% Similarity=0.092 Sum_probs=73.4
Q ss_pred eeEEE---ccCCcEEEEec-------------CCCeEEEEECC---CCCCCCeEE-eC-----------CCCCEeEEEEe
Q psy6446 24 SSVHF---ATDSYRLATGS-------------NDKNIRIYDLN---KPDAEPTVY-RG-----------HSSGIKHVQFF 72 (134)
Q Consensus 24 ~~~~~---~~~~~~l~~~~-------------~d~~v~i~~~~---~~~~~~~~~-~~-----------~~~~v~~~~~~ 72 (134)
..+.| .|+++++++.. .+..+..+|+. +++.....- .. .......++..
T Consensus 66 sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD 145 (334)
T 2p9w_A 66 SGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQD 145 (334)
T ss_dssp EEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEEC
T ss_pred eEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEEC
Confidence 45899 68877776533 25779999998 655432211 11 11347899999
Q ss_pred eCCCEEEEeeCC-CcEEEEecCCCceeEEEe--c-----CCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 73 KNNTRLISCAED-KTVRLWDVSASAEVQKLE--F-----GAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 73 ~~~~~l~~~~~d-~~i~~~d~~~~~~~~~~~--~-----~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++|+..++.+.. +.|...+.... ....+. . ....+.++++|+|..|++. ..+.|..+|++
T Consensus 146 ~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 146 RDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp TTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 999999988877 88777776533 222222 1 1125699999999887765 57899999864
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.78 E-value=0.002 Score=40.14 Aligned_cols=130 Identities=9% Similarity=-0.049 Sum_probs=78.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEE-EEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE-E
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRL-ATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL-I 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 79 (134)
|+..++........+........ ++|++....| .+-...+.|..+++..... .............+++.+.+..| +
T Consensus 55 I~~i~~~g~~~~~~~~~~~~~~~-l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~~~~p~glavd~~~g~ly~ 132 (349)
T 3v64_C 55 IRQVLPHRSEYTLLLNNLENAIA-LDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTGLESPGGLAVDWVHDKLYW 132 (349)
T ss_dssp EEEECTTSCCEEEEECSCSCEEE-EEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCEEEEETTTTEEEE
T ss_pred eEEEeCCCCeeEEeecCCCceEE-EEEeccccEEEEEeccCCceEEEecCCCCc-eEEEeCCCCCccEEEEecCCCeEEE
Confidence 44555554443333334444444 9999755555 4555678899999876432 22222233456789998755544 5
Q ss_pred EeeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEe--cC-CeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVT--HG-SCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~--~~-~~i~i~d~~ 133 (134)
+-...+.|.+.++........... ......++++|.+..|..+ .. +.|..+++.
T Consensus 133 ~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 133 TDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp EETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 555677899999865443333322 2456899999976655543 34 778887754
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.69 E-value=0.0032 Score=40.00 Aligned_cols=131 Identities=11% Similarity=-0.018 Sum_probs=78.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCC---CCCeEEeCCCCCEeEEEEeeCCC-
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPD---AEPTVYRGHSSGIKHVQFFKNNT- 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~- 76 (134)
|+..|+........+.....+.. ++|++....|+ +-...+.|+.+++.... ...............+++.+.+.
T Consensus 94 I~~i~l~~~~~~~~~~~~~~~~~-l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~ 172 (400)
T 3p5b_L 94 VRKMTLDRSEYTSLIPNLRNVVA-LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN 172 (400)
T ss_dssp EEEECTTSCSCEEEECSCSCEEE-EEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTE
T ss_pred eEEEccCCcceeEeccccCcceE-EeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCc
Confidence 45566655544444444445555 99998555554 44567889888887522 12222333445678899987444
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe--c-CCeEEEEeCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT--H-GSCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~-~~~i~i~d~~ 133 (134)
..++-...+.|.+.++........+. .......++++|.+..|..+ . .+.|...++.
T Consensus 173 lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 173 IYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred eEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 44555567789999987655444443 23457899999976655543 2 3677777653
No 273
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.69 E-value=0.0022 Score=38.24 Aligned_cols=108 Identities=9% Similarity=0.158 Sum_probs=70.7
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCC--CCCCCeEEe-------CCCCCEeEEEEeeCC-CEEEEeeCCCcEEEEec
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNK--PDAEPTVYR-------GHSSGIKHVQFFKNN-TRLISCAEDKTVRLWDV 92 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~--~~~~~~~~~-------~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~ 92 (134)
...++|+|.++.|.++.......+|.++. ......... .+...+..++++|.. .+++.....+.+..+|.
T Consensus 123 ~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~ 202 (255)
T 3qqz_A 123 FEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL 202 (255)
T ss_dssp CEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcC
Confidence 45599999887777776655555555431 111112221 123467899999954 45556667778999996
Q ss_pred CCCceeEEEecC----------CCCeEEEEccCCcEEEEecCCeEEEEe
Q psy6446 93 SASAEVQKLEFG----------AVPNSLEISRDGTTITVTHGSCVTFLD 131 (134)
Q Consensus 93 ~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~~~i~i~d 131 (134)
. ++.+..+... .....++|+++|+..+++..+.++.+.
T Consensus 203 ~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 203 V-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp T-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred C-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 5 5666666533 245899999999977777767777765
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.69 E-value=0.0023 Score=38.22 Aligned_cols=110 Identities=18% Similarity=0.190 Sum_probs=69.2
Q ss_pred CceeeEEEccCCcEE-EEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCce--
Q psy6446 21 IVKSSVHFATDSYRL-ATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAE-- 97 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-- 97 (134)
..++.++++|+++.| ++...++.|...|.. +.........-....-.+++.+++.++++.-.++.+.++++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 346669999976655 456778888888887 4432222112225678899988887767766677899998765442
Q ss_pred -eEEEec-------CCCCeEEEEccCCcEEEE-ec-CC-eEEEEe
Q psy6446 98 -VQKLEF-------GAVPNSLEISRDGTTITV-TH-GS-CVTFLD 131 (134)
Q Consensus 98 -~~~~~~-------~~~v~~~~~~~~~~~l~~-~~-~~-~i~i~d 131 (134)
...... ......++++|.+..+.+ .. +. .|..|+
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 222221 223479999999865554 33 32 455544
No 275
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.66 E-value=0.0028 Score=42.42 Aligned_cols=100 Identities=10% Similarity=0.046 Sum_probs=62.4
Q ss_pred eeEeec-CCCceeeEEeeCCCc-----------eeeEEEccCCcE----EEEecCCCeEEEEECCCCCCCCeEEeCC-C-
Q psy6446 2 GTVWDA-VSGEELHSFQHPHIV-----------KSSVHFATDSYR----LATGSNDKNIRIYDLNKPDAEPTVYRGH-S- 63 (134)
Q Consensus 2 i~v~d~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----l~~~~~d~~v~i~~~~~~~~~~~~~~~~-~- 63 (134)
|.-+|. .+|+.+..++..... ...+++.|.+.. ++.++.|+.+..+|..+++......... .
T Consensus 75 v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~ 154 (599)
T 1w6s_A 75 TFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKV 154 (599)
T ss_dssp EEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGG
T ss_pred EEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCc
Confidence 567898 899999988743221 112455443444 8888889999999999877543221111 0
Q ss_pred -CCEeE-EEEeeCCCEEEEee------CCCcEEEEecCCCceeEEEec
Q psy6446 64 -SGIKH-VQFFKNNTRLISCA------EDKTVRLWDVSASAEVQKLEF 103 (134)
Q Consensus 64 -~~v~~-~~~~~~~~~l~~~~------~d~~i~~~d~~~~~~~~~~~~ 103 (134)
..+.. ... .++ .++.++ .++.|.-+|..+++.+..+..
T Consensus 155 ~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 155 GSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp TCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred cceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 01111 111 244 444444 378999999999999887764
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.66 E-value=0.0033 Score=39.15 Aligned_cols=107 Identities=9% Similarity=0.041 Sum_probs=67.0
Q ss_pred EEEccC-CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE-EeeCC-CcEEEEecCCCceeEEEe
Q psy6446 26 VHFATD-SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI-SCAED-KTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 26 ~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d-~~i~~~d~~~~~~~~~~~ 102 (134)
+++.+. ++..++-...+.|.+.+++... ..............+++.|.+..++ +-... +.|...++..........
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 199 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 199 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 888874 4455555667889999987533 2222333345678999998666554 44444 678888876433222111
Q ss_pred c-CCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 103 F-GAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 103 ~-~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
. -.....++++|++..|..+ ..+.|..+|+.
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 1 2346899999877665544 45788888764
No 277
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.61 E-value=0.0042 Score=39.22 Aligned_cols=107 Identities=9% Similarity=0.044 Sum_probs=66.6
Q ss_pred EEEccC-CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee-CC-CcEEEEecCCCceeEEEe
Q psy6446 26 VHFATD-SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA-ED-KTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 26 ~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~~d~~~~~~~~~~~ 102 (134)
+++++. +++.++-...+.|.+.+++... ..............+++.|.+..|+... .. +.|...++..........
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 242 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 242 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 788874 4444555667788888876533 2222333335678999998766655443 34 678888876443333222
Q ss_pred c-CCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 103 F-GAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 103 ~-~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
. -.....++++|++..|..+ ..+.|..+|+.
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 2 2346899999877655543 45788888764
No 278
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.54 E-value=0.00053 Score=46.63 Aligned_cols=130 Identities=11% Similarity=-0.043 Sum_probs=72.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEe-cCCCeEEEEECCCC---CCCCeEEeCCCCCEeEEEEeeCC-C
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATG-SNDKNIRIYDLNKP---DAEPTVYRGHSSGIKHVQFFKNN-T 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~v~i~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~-~ 76 (134)
|+..++.+.+....+.....+.. ++|++.+..|+.+ ...+.|+.+++... ................+++.+.+ +
T Consensus 388 I~~id~~~~~~~~~~~~~~~p~g-la~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~ 466 (699)
T 1n7d_A 388 VRKMTLDRSEYTSLIPNLRNVVA-LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN 466 (699)
T ss_dssp -CEECTTSCCEECCSCCCTTCCC-CEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSB
T ss_pred eEEEeCCCCcceeeeccCcceEE-EccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCc
Confidence 45556655544444433344455 8999866666555 45678999988751 11111121122345678887544 4
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEe--cC-CeEEEEeC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVT--HG-SCVTFLDA 132 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~--~~-~~i~i~d~ 132 (134)
.+++-...+.|.+.++........+.. ......++++|.+.+|+.+ .. +.|..+++
T Consensus 467 LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~ 526 (699)
T 1n7d_A 467 IYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 526 (699)
T ss_dssp CEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCS
T ss_pred EEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeC
Confidence 445555667899999875443333322 2456788999876555443 22 56766654
No 279
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.50 E-value=0.0055 Score=42.18 Aligned_cols=107 Identities=9% Similarity=0.059 Sum_probs=63.9
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 102 (134)
+.++...+++...+ ++.++.+..|+..+..............|.++...+++...+ +..++.+..||..+++... +.
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~-~~ 251 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKN-YL 251 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEE-EC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEE-ee
Confidence 34477777775444 555445888887654311100112345688888777766554 4444448889977654332 22
Q ss_pred c---------CCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 103 F---------GAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 103 ~---------~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
. ...|.++..+++|.+.+++.+ .|.+||..
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEG 290 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETT
T ss_pred cCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCC
Confidence 1 245788988989887777655 57777754
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.46 E-value=0.012 Score=40.76 Aligned_cols=131 Identities=11% Similarity=-0.029 Sum_probs=76.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCC---CCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPD---AEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
|+..++...+....+........ ++|++... ++++-...+.|+.+++.... .....+.........+++.+.++.
T Consensus 406 Ir~i~l~~~~~~~l~~~~~~~~g-l~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~ 484 (791)
T 3m0c_C 406 VRKMTLDRSEYTSLIPNLRNVVA-LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN 484 (791)
T ss_dssp EEEECTTSCCCEEEECSCSSEEE-EEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTE
T ss_pred eeEeeccCCcceeeecCCCceEE-EeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCc
Confidence 34455554444333334444555 89988544 44555566788888887531 122233334456788999886655
Q ss_pred EE-EeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe--cC-CeEEEEeCC
Q psy6446 78 LI-SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT--HG-SCVTFLDAN 133 (134)
Q Consensus 78 l~-~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~-~~i~i~d~~ 133 (134)
|+ +-...+.|.+.++........+. .......++++|.+..|..+ .. +.|...++.
T Consensus 485 LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 485 IYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp EEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 54 55567789999987554433333 23457899999976555543 23 677777653
No 281
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.46 E-value=0.0081 Score=38.63 Aligned_cols=106 Identities=22% Similarity=0.235 Sum_probs=71.8
Q ss_pred CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC---------e--EEeC------CCCCEeEEEEee---CCCEEEE
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP---------T--VYRG------HSSGIKHVQFFK---NNTRLIS 80 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~---------~--~~~~------~~~~v~~~~~~~---~~~~l~~ 80 (134)
.+.. +..+|+|++|+..+. ..|.|..+..+.... . .+.- ...+|..+.|+| ++..|++
T Consensus 67 ~i~q-lvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFH-VISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCE-EEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeE-EEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 3445 999999999998865 578888877322111 1 1221 246799999999 4578999
Q ss_pred eeCCCcEEEEecCCCc--eeEEEe-------c---CCCCeEEEEccCCcEEEE-e--cCCeEEE
Q psy6446 81 CAEDKTVRLWDVSASA--EVQKLE-------F---GAVPNSLEISRDGTTITV-T--HGSCVTF 129 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~--~~~~~~-------~---~~~v~~~~~~~~~~~l~~-~--~~~~i~i 129 (134)
-..|+.|++||+.... +. .+. . ...+.+++|.+++-.|.+ + .+|.|+-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 9999999999997522 22 222 1 156789999998854443 3 4577754
No 282
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.44 E-value=0.01 Score=39.57 Aligned_cols=120 Identities=15% Similarity=0.130 Sum_probs=75.3
Q ss_pred eeEeecCC----Cc-eeeEEeeCCCceeeEEEccCCcEEEEec-CCCeEEEEECCCC------CC--CC---eEEeCCCC
Q psy6446 2 GTVWDAVS----GE-ELHSFQHPHIVKSSVHFATDSYRLATGS-NDKNIRIYDLNKP------DA--EP---TVYRGHSS 64 (134)
Q Consensus 2 i~v~d~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~------~~--~~---~~~~~~~~ 64 (134)
+.|.|.+. +. .+..+.-++..-. +.++|||+++++++ .+..+.++|+... +. +. .....-.-
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHG-v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHG-CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCC-EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred eeEEccccccccCCceEEEEeCCCCCcc-eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 45667655 22 3444556666666 99999999987765 5778999998741 10 00 11112335
Q ss_pred CEeEEEEeeCCCEEEEeeCCCcEEEEecCCC----------ceeEEEecCCCCeEEEE------ccCCcEEEEe
Q psy6446 65 GIKHVQFFKNNTRLISCAEDKTVRLWDVSAS----------AEVQKLEFGAVPNSLEI------SRDGTTITVT 122 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~----------~~~~~~~~~~~v~~~~~------~~~~~~l~~~ 122 (134)
.....+|.++|.-..+-.-|.+|..|++... ..+..+.....+-.+.- .|+|++|++.
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 6788999999965566778999999998753 33444443333333332 4677777653
No 283
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.44 E-value=0.013 Score=40.46 Aligned_cols=106 Identities=5% Similarity=-0.042 Sum_probs=68.4
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe-----CCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR-----GHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA 96 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 96 (134)
.+.++...++++.|..|+.++-+..++..++.. ..+. .....|.++...++++..+.. . +.+..||..+++
T Consensus 407 ~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~--~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV--ENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRS 482 (795)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEETTTCCE--EEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTE
T ss_pred cEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE--EEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCe
Confidence 445577777887567777767799999876431 1221 123568888887777755544 4 458889987654
Q ss_pred eeEEEe-------cCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 97 EVQKLE-------FGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 97 ~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
...... ....|.++..+++|.+.+++. +.|..||.
T Consensus 483 ~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~ 524 (795)
T 4a2l_A 483 FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQ 524 (795)
T ss_dssp EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEE
T ss_pred EEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeC
Confidence 332211 124578888899998777766 55777765
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.35 E-value=0.0047 Score=42.12 Aligned_cols=106 Identities=14% Similarity=0.000 Sum_probs=59.6
Q ss_pred eEEEccCCcEEEEecC--CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE-EeeCCCcEEEEecCCCceeEEE
Q psy6446 25 SVHFATDSYRLATGSN--DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI-SCAEDKTVRLWDVSASAEVQKL 101 (134)
Q Consensus 25 ~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~ 101 (134)
.++++|.+..|+.+.. .+.|..+++..... .......-.....++++|++..|+ +-...+.|..+++........+
T Consensus 500 giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~ 578 (699)
T 1n7d_A 500 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 578 (699)
T ss_dssp CEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEEC
T ss_pred eEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEE
Confidence 3888886555554432 26777777654322 112222234567899998765554 4455678999998643332222
Q ss_pred ec---CCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 102 EF---GAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 102 ~~---~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
.. ......+++..+ .++++. ..+.|..+|.
T Consensus 579 ~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 579 EDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp CCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred ecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 21 123456666554 333333 4578888875
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.35 E-value=0.0057 Score=41.29 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=55.6
Q ss_pred EEEcc-CCcEEEEecCCC-----------eEEEEECCCCCCCCeEEe---CCCCC-EeEEEEeeCCCEEEEeeCC-----
Q psy6446 26 VHFAT-DSYRLATGSNDK-----------NIRIYDLNKPDAEPTVYR---GHSSG-IKHVQFFKNNTRLISCAED----- 84 (134)
Q Consensus 26 ~~~~~-~~~~l~~~~~d~-----------~v~i~~~~~~~~~~~~~~---~~~~~-v~~~~~~~~~~~l~~~~~d----- 84 (134)
+.+.. +++.++.|+.++ .+.+||..+..- .... -.... -.++...|+++.++.++.+
T Consensus 404 v~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W--~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 404 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPN--TVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF 481 (656)
T ss_dssp EEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCE--EEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred EeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCe--eEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc
Confidence 44443 677788887532 577777765331 1111 11222 2344566799999988754
Q ss_pred ------CcEEEEecCCCceeEEEe--cC-CCCeEEEEccCCcEEEEec
Q psy6446 85 ------KTVRLWDVSASAEVQKLE--FG-AVPNSLEISRDGTTITVTH 123 (134)
Q Consensus 85 ------~~i~~~d~~~~~~~~~~~--~~-~~v~~~~~~~~~~~l~~~~ 123 (134)
..+.+||..+.+....-. .. ....+..+.|+++.++.|+
T Consensus 482 ~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp CCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred CCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 468999987765432111 11 1223455678999888764
No 286
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.28 E-value=0.014 Score=37.57 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=68.8
Q ss_pred EccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC----CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc-------
Q psy6446 28 FATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH----SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA------- 96 (134)
Q Consensus 28 ~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~------- 96 (134)
...++..++.+. ++.||..++.... ..+.++.. -..+..+..+|+|++|+..+.. .|.+..+..+.
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccc
Confidence 344666666654 3788888887543 33444432 2368889999999999887654 67887776321
Q ss_pred -----eeEEEec-------CCCCeEEEEccCC---c-EEEEecCCeEEEEeCC
Q psy6446 97 -----EVQKLEF-------GAVPNSLEISRDG---T-TITVTHGSCVTFLDAN 133 (134)
Q Consensus 97 -----~~~~~~~-------~~~v~~~~~~~~~---~-~l~~~~~~~i~i~d~~ 133 (134)
..+.+.. ..+|..+.|+|-+ . .++...|+.|++||+.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~ 157 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDIL 157 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETT
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcc
Confidence 1123332 3578999999955 3 4455799999999986
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.24 E-value=0.015 Score=37.00 Aligned_cols=108 Identities=10% Similarity=0.030 Sum_probs=68.8
Q ss_pred eEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee-C-CCcEEEEecCCCceeEEE
Q psy6446 25 SVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA-E-DKTVRLWDVSASAEVQKL 101 (134)
Q Consensus 25 ~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~i~~~d~~~~~~~~~~ 101 (134)
.+++.+ .+++..+-...+.|.+.+++... ..............+++.|.+..|+... . .+.|...++.........
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~-~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCS-EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCc-eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 378877 45555555667888888887533 2223333445688999999666655443 2 467888887644333333
Q ss_pred ecC-CCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 102 EFG-AVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 102 ~~~-~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
... .....+++++++..|..+ ..+.|..+|+.
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 222 456899999887666554 45788888864
No 288
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.23 E-value=0.012 Score=35.99 Aligned_cols=107 Identities=10% Similarity=0.027 Sum_probs=67.4
Q ss_pred eEEEccCC-cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeC-C-CcEEEEecCCCceeEEE
Q psy6446 25 SVHFATDS-YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAE-D-KTVRLWDVSASAEVQKL 101 (134)
Q Consensus 25 ~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~~~d~~~~~~~~~~ 101 (134)
.+++++.+ +..++-...+.|.+.+++... ..............+++.|.+..++.... . +.|...++.. .....+
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~ 158 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSL 158 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEE
Confidence 38887644 444555667889999987532 22223333456789999986665554443 2 6788888753 333333
Q ss_pred ec--CCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 102 EF--GAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 102 ~~--~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
.. -.....++++|++..|..+ ..+.|..+|+.
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 21 2456799999887666544 45789888864
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.22 E-value=0.022 Score=38.45 Aligned_cols=130 Identities=11% Similarity=0.011 Sum_probs=72.6
Q ss_pred eeEeecCCCc--eeeEEeeCCCceeeEEEccCCcEEEE-ecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGE--ELHSFQHPHIVKSSVHFATDSYRLAT-GSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|+..|+.... ............. ++|++.+..|+. -...+.|..++++...........--.....+++.+.++.|
T Consensus 20 I~~i~~~~~~~~~~~~~~~~~~~~~-ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~l 98 (619)
T 3s94_A 20 LRLVDATNGKENATIVVGGLEDAAA-VDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKL 98 (619)
T ss_dssp EEEECCC---------CBCCSCEEE-EEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEE
T ss_pred EEEEeCCCCcceEEEEEcCCCceEE-EEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEE
Confidence 5566665432 2222223344455 999986665554 44567888888876432222333333578899999855555
Q ss_pred -EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe--c-CCeEEEEeC
Q psy6446 79 -ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT--H-GSCVTFLDA 132 (134)
Q Consensus 79 -~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~-~~~i~i~d~ 132 (134)
++-...+.|.+.++.......... .-.....++++|.+..|..+ . .+.|...++
T Consensus 99 y~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~ 157 (619)
T 3s94_A 99 YWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGM 157 (619)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEEC
Confidence 455567889999987544333332 23457889999875555443 2 356665554
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.16 E-value=0.017 Score=36.20 Aligned_cols=107 Identities=12% Similarity=0.166 Sum_probs=69.3
Q ss_pred EEE--ccC-Cc-EEEEecCCCeEEEEECCC---CC---CCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecC--
Q psy6446 26 VHF--ATD-SY-RLATGSNDKNIRIYDLNK---PD---AEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVS-- 93 (134)
Q Consensus 26 ~~~--~~~-~~-~l~~~~~d~~v~i~~~~~---~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-- 93 (134)
+++ +|. +. ++++...+|.+..|++.. +. ...+.+. -.+.+..+...+....|+.+-++.-|..++..
T Consensus 133 lcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~ 211 (355)
T 3amr_A 133 FTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPD 211 (355)
T ss_dssp EEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTT
T ss_pred EEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEEeCCcC
Confidence 555 663 43 578888889999988843 11 1122332 34678888888888899999998777777744
Q ss_pred ---CCceeEEEecC---CCCeEEEEc--cCCc-EEEE-e-cCCeEEEEeCC
Q psy6446 94 ---ASAEVQKLEFG---AVPNSLEIS--RDGT-TITV-T-HGSCVTFLDAN 133 (134)
Q Consensus 94 ---~~~~~~~~~~~---~~v~~~~~~--~~~~-~l~~-~-~~~~i~i~d~~ 133 (134)
+++.+...... ..+..+++. ++++ ++++ + .++.+.+||.+
T Consensus 212 ~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 212 GGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp SCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 23344333222 457788874 5554 5555 4 46899999974
No 291
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.16 E-value=0.017 Score=36.06 Aligned_cols=99 Identities=14% Similarity=0.156 Sum_probs=58.5
Q ss_pred CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCC-Ce---EEeCCCCCEeEEEEeeC---CCEEEEeeC-C-----Cc
Q psy6446 20 HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAE-PT---VYRGHSSGIKHVQFFKN---NTRLISCAE-D-----KT 86 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~-~~---~~~~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~ 86 (134)
..... ++|.|+|+.+++ ..+|.|.+++ . +... .. ...........++++|+ +..|+.+.. + +.
T Consensus 31 ~~P~~-ia~~pdG~l~V~-e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWA-LAFLPDGGMLIA-ERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEE-EEECTTSCEEEE-ETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceE-EEEcCCCeEEEE-eCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 34445 999999985554 5569999998 2 2211 00 01112356899999998 555554433 2 56
Q ss_pred EEEEecCCCce-----eE-EEec-C---CCCeEEEEccCCcEEEEe
Q psy6446 87 VRLWDVSASAE-----VQ-KLEF-G---AVPNSLEISRDGTTITVT 122 (134)
Q Consensus 87 i~~~d~~~~~~-----~~-~~~~-~---~~v~~~~~~~~~~~l~~~ 122 (134)
|..++...+.. +. .+.. . .....++|.|+|.+.++.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 77887764321 11 1221 1 234689999999766653
No 292
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.023 Score=39.13 Aligned_cols=107 Identities=13% Similarity=0.078 Sum_probs=65.3
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe---CCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCcee
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR---GHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEV 98 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 98 (134)
.+.++...++++ |..|+.++-+..++..++.. ..+. .....|.++...++++.. .+.. +-+..+|..+++..
T Consensus 408 ~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 408 SVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKF--QIIELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVI 482 (781)
T ss_dssp BEEEEEECTTSC-EEEEETTEEEEEECSSSCEE--EECCSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCC
T ss_pred ceEEEEECCCCC-EEEEeccCCEEEEcCCCCcE--EEeccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEE
Confidence 344466666665 44466656688888765321 1111 123568888776666544 4444 55888998776543
Q ss_pred EEEec------CCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 99 QKLEF------GAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 99 ~~~~~------~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
..... ...+.++..+++|.+.+++.++.|..||.+
T Consensus 483 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~ 523 (781)
T 3v9f_A 483 HHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPD 523 (781)
T ss_dssp EEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTT
T ss_pred ecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCC
Confidence 33221 246788889999988877764446667653
No 293
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.15 E-value=0.02 Score=36.81 Aligned_cols=131 Identities=12% Similarity=0.057 Sum_probs=75.9
Q ss_pred eeEeecCCCceeeEE-e-eCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCCC-C--CeEEeCC-------------
Q psy6446 2 GTVWDAVSGEELHSF-Q-HPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDA-E--PTVYRGH------------- 62 (134)
Q Consensus 2 i~v~d~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~-~--~~~~~~~------------- 62 (134)
|+.+|..++.....+ . ........++|+|+++.|+ +-...+.|+.++++.... . ...+.+.
T Consensus 252 V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~ 331 (433)
T 4hw6_A 252 ISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTG 331 (433)
T ss_dssp EEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGG
T ss_pred EEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccc
Confidence 556666656552222 2 2222222399999998554 445668899988653211 1 1122221
Q ss_pred --CCCEeEEEE---------eeCCCEEEEeeCCCcEEEEecCCCceeEEEecC------------------CCCeEEEEc
Q psy6446 63 --SSGIKHVQF---------FKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG------------------AVPNSLEIS 113 (134)
Q Consensus 63 --~~~v~~~~~---------~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~------------------~~v~~~~~~ 113 (134)
-.....+++ .+++..+++-..++.|+.++. ++......... .....++++
T Consensus 332 a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd 410 (433)
T 4hw6_A 332 ARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYD 410 (433)
T ss_dssp SBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEE
T ss_pred eEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEE
Confidence 123667888 556666666666778999884 45332222110 125689999
Q ss_pred -cCCcEEEEe-cCCeEEEEeCC
Q psy6446 114 -RDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 114 -~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.++++- .++.|+.++++
T Consensus 411 ~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 411 MKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEecC
Confidence 566666664 56899988875
No 294
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.15 E-value=0.039 Score=40.03 Aligned_cols=128 Identities=7% Similarity=0.088 Sum_probs=73.8
Q ss_pred eeEeecCCCceeeEEeeCC-CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC------
Q psy6446 2 GTVWDAVSGEELHSFQHPH-IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN------ 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~------ 74 (134)
|++.+...+..+.....+. ..+.+.+.+ +.+++.++ .+.+.++.++.+.........-...|.++++.|.
T Consensus 494 Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~ 570 (1158)
T 3ei3_A 494 VRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGL 570 (1158)
T ss_dssp EEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTC
T ss_pred EEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCccc
Confidence 5566655444555554322 223324443 34565554 5677777776532111111233568999999763
Q ss_pred CCEEEEeeC-CCcEEEEecCCCceeEEEecC--CCCeEEEEcc--CCcEEEEe-cCCeEEEEeC
Q psy6446 75 NTRLISCAE-DKTVRLWDVSASAEVQKLEFG--AVPNSLEISR--DGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 75 ~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~-~~~~i~i~d~ 132 (134)
+++++.|.. |++++++++.+.+.+...... ..+.++.+.. ...++.++ .||.+..+.+
T Consensus 571 s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 571 SPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp CSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred ccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 368888886 999999999877666554432 2445554432 23466666 6787765543
No 295
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.13 E-value=0.016 Score=35.21 Aligned_cols=127 Identities=13% Similarity=0.060 Sum_probs=66.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC--CeEEEEECCCCCCCCeEEe-CCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND--KNIRIYDLNKPDAEPTVYR-GHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--~~v~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l 78 (134)
|..+|.. ++....+..... ...+++.++++++++.... ..+..++..++.. ..... ........++..+++..+
T Consensus 55 I~~~d~~-g~~~~~~~~~~~-p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~-~~~~~~~~~~~~~g~~~~~~~~~~ 131 (306)
T 2p4o_A 55 IVSITPD-GNQQIHATVEGK-VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV-ETLLTLPDAIFLNGITPLSDTQYL 131 (306)
T ss_dssp EEEECTT-CCEEEEEECSSE-EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE-EEEEECTTCSCEEEEEESSSSEEE
T ss_pred EEEECCC-CceEEEEeCCCC-ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE-EEEEeCCCccccCcccccCCCcEE
Confidence 4455544 333333333333 3448999999866554332 2466677665442 11111 112223445544444444
Q ss_pred EEeeCCCcEEEEecCCCce-eEEEe--------cC--CCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASAE-VQKLE--------FG--AVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~-~~~~~--------~~--~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
++-..++.|..+|...++. +.... .. .....+ +|++..+..+ ..+.|..||+.
T Consensus 132 v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 132 TADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVD 197 (306)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBC
T ss_pred EEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeC
Confidence 4444578888888765431 11111 01 123445 7888766654 45899999874
No 296
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.90 E-value=0.031 Score=34.89 Aligned_cols=92 Identities=10% Similarity=0.134 Sum_probs=63.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCC----CCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHS----SGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~ 76 (134)
++.|+|+++.+.++.+.-.+.++. ..|-.+. .|+..+ +..|+.|++.....+...+.-|. ..|-.-..+++.+
T Consensus 88 ~LQiFnletK~klks~~~~e~Vvf-WkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~k 164 (365)
T 2xzh_A 88 TLQIFNIEMKSKMKAHTMTDDVTF-WKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQK 164 (365)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEE-EEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSC
T ss_pred eEEEechHHhhhhcceecCCccEE-EEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCC
Confidence 478999999999999987778877 8886544 444333 35799999987556666666553 4566667778889
Q ss_pred EEEEeeC---C----CcEEEEecCCC
Q psy6446 77 RLISCAE---D----KTVRLWDVSAS 95 (134)
Q Consensus 77 ~l~~~~~---d----~~i~~~d~~~~ 95 (134)
+++..+- + |.+.+|..+.+
T Consensus 165 W~~l~GI~~~~~~v~G~mQLYS~er~ 190 (365)
T 2xzh_A 165 WLLLTGISAQQNRVVGAMQLYSVDRK 190 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEEEETTTT
T ss_pred EEEEEeEeccCCccceeEEEEeeccc
Confidence 8764432 2 56777776543
No 297
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.88 E-value=0.0047 Score=36.17 Aligned_cols=99 Identities=10% Similarity=-0.007 Sum_probs=61.7
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCC--------EeEEEEeeCCCEEEEeeCCCcEEEEecCC
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSG--------IKHVQFFKNNTRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 94 (134)
+..++|+|+|.+.++ .+|.++-.+..+..... ..+.... ...+.|.|++...++ .||.|.-++-.+
T Consensus 43 ~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~--W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN--WMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC--HHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ceeEEECCCccEEEE--eCCeEEEECCCCCCccc--ccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 345999999986666 67777766654422211 1111112 377888889887776 568888777543
Q ss_pred Ccee------EEEec--CCCCeEEEEccCCcEEEEecCCeEE
Q psy6446 95 SAEV------QKLEF--GAVPNSLEISRDGTTITVTHGSCVT 128 (134)
Q Consensus 95 ~~~~------~~~~~--~~~v~~~~~~~~~~~l~~~~~~~i~ 128 (134)
.... ..+.. =..+..+.+.|+|.+.++. ++.+.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~ly 157 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFY 157 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEE
Confidence 2111 11111 1356889999999998888 88754
No 298
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.88 E-value=0.033 Score=34.77 Aligned_cols=103 Identities=13% Similarity=0.132 Sum_probs=57.4
Q ss_pred CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC-CCe----EEeCCCCCEeEEEEeeC---CCEEEEee-C------
Q psy6446 19 PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA-EPT----VYRGHSSGIKHVQFFKN---NTRLISCA-E------ 83 (134)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~-~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~-~------ 83 (134)
-..... ++|.|+|+.++++...|.|++++...... ... ...........++++|+ +..|.... .
T Consensus 17 l~~P~~-i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWA-LAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEE-EEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEE-EEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 344455 99999998344555679999998543211 111 11122346789999995 45554332 2
Q ss_pred -CCcEEEEecCCC--c--eeEEE-e-cC------CCCeEEEEccCCcEEEEe
Q psy6446 84 -DKTVRLWDVSAS--A--EVQKL-E-FG------AVPNSLEISRDGTTITVT 122 (134)
Q Consensus 84 -d~~i~~~d~~~~--~--~~~~~-~-~~------~~v~~~~~~~~~~~l~~~ 122 (134)
...|..++.... + ....+ . .. .....+.|.|||.+.++.
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 234666666432 1 11111 1 11 124689999999766654
No 299
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.76 E-value=0.042 Score=34.34 Aligned_cols=100 Identities=10% Similarity=0.009 Sum_probs=57.8
Q ss_pred CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeE---EeCCCCCEeEEEEeeC---CCEEEEeeC----C----C
Q psy6446 20 HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTV---YRGHSSGIKHVQFFKN---NTRLISCAE----D----K 85 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~---~~~~~~~v~~~~~~~~---~~~l~~~~~----d----~ 85 (134)
..... ++|.|+|+++++ ..+|.|++++. .+...... ..........++++|+ +..|+.+.. + +
T Consensus 29 ~~P~~-ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWS-IAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEE-EEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeE-EEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34444 999999975554 55699998873 22211100 0112356889999997 555544332 3 5
Q ss_pred cEEEEecCCC--c---e--e-EEEec--CCCCeEEEEccCCcEEEEe
Q psy6446 86 TVRLWDVSAS--A---E--V-QKLEF--GAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 86 ~i~~~d~~~~--~---~--~-~~~~~--~~~v~~~~~~~~~~~l~~~ 122 (134)
.|..++.... . . + ..+.. ......+.|.|+|.++++.
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 6777776543 1 1 1 11221 1235789999999866653
No 300
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.75 E-value=0.04 Score=33.93 Aligned_cols=106 Identities=7% Similarity=-0.024 Sum_probs=62.8
Q ss_pred eEEEccCCcEEEEec--CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe-eCCCcEEEEecCCCceeEEE
Q psy6446 25 SVHFATDSYRLATGS--NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC-AEDKTVRLWDVSASAEVQKL 101 (134)
Q Consensus 25 ~~~~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~ 101 (134)
.++++|.+..|+.+. ..+.|...+++... ........-.....++++|++..|+.+ ...+.|..+|+.........
T Consensus 126 giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 204 (318)
T 3sov_A 126 AIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV 204 (318)
T ss_dssp EEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe
Confidence 388888655555544 35788888876432 212222233467899999977666544 45678999998643332222
Q ss_pred e-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 102 E-FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 102 ~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
. .......+++..+ ..+.+. ..+.|..+|.
T Consensus 205 ~~~~~~P~glav~~~-~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 205 KGSLPHPFALTLFED-ILYWTDWSTHSILACNK 236 (318)
T ss_dssp CSCCSCEEEEEEETT-EEEEEETTTTEEEEEET
T ss_pred cCCCCCceEEEEeCC-EEEEEecCCCeEEEEEC
Confidence 2 2234567777543 333333 4578887775
No 301
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.72 E-value=0.079 Score=36.94 Aligned_cols=107 Identities=9% Similarity=0.015 Sum_probs=68.5
Q ss_pred EEEccCCcE-EEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee-C-CCcEEEEecCCCceeEEEe
Q psy6446 26 VHFATDSYR-LATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA-E-DKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 26 ~~~~~~~~~-l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~i~~~d~~~~~~~~~~~ 102 (134)
+++.+.++. .++-...+.|.+.+++... ..............+++.|....|+... . .+.|...++..........
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~ 554 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 554 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe
Confidence 888876644 4555667899999987533 2223333445689999999765555443 3 3678888876544433333
Q ss_pred cC-CCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 103 FG-AVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 103 ~~-~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
.. .....|++++.+..|..+ ..+.|..+|+.
T Consensus 555 ~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 555 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 22 457899999876655544 34788888764
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.71 E-value=0.047 Score=34.26 Aligned_cols=106 Identities=9% Similarity=0.083 Sum_probs=62.2
Q ss_pred EEEcc--CCc-EEEEe-cC--CCeEEEEECCCCCCCCeE---EeCC-CCCEeEEEEeeCCCEEEEeeC------------
Q psy6446 26 VHFAT--DSY-RLATG-SN--DKNIRIYDLNKPDAEPTV---YRGH-SSGIKHVQFFKNNTRLISCAE------------ 83 (134)
Q Consensus 26 ~~~~~--~~~-~l~~~-~~--d~~v~i~~~~~~~~~~~~---~~~~-~~~v~~~~~~~~~~~l~~~~~------------ 83 (134)
+.+.+ ++. +|+++ .. +..+.+|++......... +.+. -...+.+.+.++|.+.++...
T Consensus 117 i~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~ 196 (355)
T 3sre_A 117 ISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEM 196 (355)
T ss_dssp EEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHH
T ss_pred eEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchh
Confidence 55544 343 34333 33 467788777654322221 2221 245789999999987776431
Q ss_pred -----CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 84 -----DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 84 -----d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
.+.+.-+|. ++.......-...+.++|+||++.+..+ ..+.|..|++.
T Consensus 197 ~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 197 HLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp HTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred hccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 234444544 3332222233456899999999877765 45899999874
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.63 E-value=0.053 Score=33.74 Aligned_cols=109 Identities=10% Similarity=0.145 Sum_probs=69.1
Q ss_pred eeeEEEccCCcEEEEec-CCCeEEEEECCCCCCCCeEEeC----C--CCCEeEEEE---eeCCCEEEEee----------
Q psy6446 23 KSSVHFATDSYRLATGS-NDKNIRIYDLNKPDAEPTVYRG----H--SSGIKHVQF---FKNNTRLISCA---------- 82 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~l~~~~---------- 82 (134)
-.+++|++....|..++ ..+.|..|+...+......+.. . ...+..+.+ .|+++.+++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34599988555555555 7899999998743321111111 0 113578999 57877766443
Q ss_pred ---CCCcEEEEecC---CCceeEEEecC--------------CCCeEEEEccCCcEEEE-ecC-CeEEEEe
Q psy6446 83 ---EDKTVRLWDVS---ASAEVQKLEFG--------------AVPNSLEISRDGTTITV-THG-SCVTFLD 131 (134)
Q Consensus 83 ---~d~~i~~~d~~---~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~-~~~-~~i~i~d 131 (134)
.+..+..+|+. +++........ .....++.+++|+..++ +.. +.|...+
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence 25779999999 78777666521 13678999999986664 344 5555544
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.61 E-value=0.071 Score=35.06 Aligned_cols=108 Identities=16% Similarity=0.094 Sum_probs=63.5
Q ss_pred eEEEcc-CCcEEEEecC-CCeEEEEECCCCCCCCeEEeCC---CCCEeEEEE-------eeCCCEEEEeeCCC-------
Q psy6446 25 SVHFAT-DSYRLATGSN-DKNIRIYDLNKPDAEPTVYRGH---SSGIKHVQF-------FKNNTRLISCAEDK------- 85 (134)
Q Consensus 25 ~~~~~~-~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~d~------- 85 (134)
.++|+| +...|+++.. .+.|++.|+..+. .......- -.....++| +++++.|+.....+
T Consensus 143 ~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~ 221 (496)
T 3kya_A 143 RLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESP 221 (496)
T ss_dssp EEEEETTEEEEEEEEEETEEEEEEEETTTTE-EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEE
T ss_pred EEEEccCCCCEEEEEECCCCeEEEEECCCCE-EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCc
Confidence 488998 3555555443 4678888887643 22222211 124889999 99999766655443
Q ss_pred cEEEEecCC-Ccee-----EEEecCCCCeEEEEccCCcE-EEEe-cCCeEEEEeCC
Q psy6446 86 TVRLWDVSA-SAEV-----QKLEFGAVPNSLEISRDGTT-ITVT-HGSCVTFLDAN 133 (134)
Q Consensus 86 ~i~~~d~~~-~~~~-----~~~~~~~~v~~~~~~~~~~~-l~~~-~~~~i~i~d~~ 133 (134)
.+.+++... +... ..+........++++|++.. +++. .++.|..+|++
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred eEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 255665333 1221 22322234568899995544 4444 56889999864
No 305
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.50 E-value=0.022 Score=33.47 Aligned_cols=66 Identities=11% Similarity=-0.012 Sum_probs=43.3
Q ss_pred CCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCce------eEEEecC--CCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAE------VQKLEFG--AVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~------~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
..+..++|+|++...+. .++.+.-.+..+... ...+... ..-..+.|+|+|.+.++ .||.|.-++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCC
Confidence 46789999998885554 677766666544211 1222110 11478999999998888 6798887764
No 306
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.42 E-value=0.11 Score=35.12 Aligned_cols=129 Identities=9% Similarity=-0.080 Sum_probs=76.5
Q ss_pred eeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|+..|+.+......+. +-..... ++|++.+..|+ +-..++.|..++++... .......-......+++.+.+..|
T Consensus 17 I~~i~l~~~~~~~~~~~~~~~~~~~-l~~d~~~~~lywtD~~~~~I~r~~~~g~~-~~~v~~~g~~~P~GlAvD~~~~~L 94 (628)
T 4a0p_A 17 IRRISLETNNNNVAIPLTGVKEASA-LDFDVTDNRIYWTDISLKTISRAFMNGSA-LEHVVEFGLDYPEGMAVDWLGKNL 94 (628)
T ss_dssp EEEEESSCTTCEEECCCCSCSCEEE-EEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEEEEETTTTEE
T ss_pred EEEEECCCCCcceEEEcCCCCceEE-EEEECCCCEEEEEECCCCeEEEEECCCCC-cEEEEeCCCCCcceEEEEeCCCEE
Confidence 5566666544333332 2234444 99998655554 55567889999887533 222232222457889998765555
Q ss_pred -EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe--c-CCeEEEEeC
Q psy6446 79 -ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT--H-GSCVTFLDA 132 (134)
Q Consensus 79 -~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~-~~~i~i~d~ 132 (134)
++-...+.|.+.++.......... .-.....++++|....|..+ . .+.|...++
T Consensus 95 Y~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~ 153 (628)
T 4a0p_A 95 YWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAM 153 (628)
T ss_dssp EEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeC
Confidence 455556789999986544333222 23456899999865444443 2 467776665
No 307
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.40 E-value=0.13 Score=35.53 Aligned_cols=107 Identities=13% Similarity=0.059 Sum_probs=64.0
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC-----CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH-----SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA 96 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 96 (134)
.+.++...+++.. ..|+. +-+..++..++... ...... ...|.++...++++..+ ++.++-+..+|..+++
T Consensus 451 ~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 451 DVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVI-HHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQL 526 (781)
T ss_dssp CEEEEEECTTSEE-EEEET-TEEEEEESSSSSCC-EEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCE
T ss_pred eEEEEEECCCCCE-EEEEC-CceEEEeCCCCeEE-ecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCe
Confidence 3444777777654 44444 45888888764322 221111 35688888877777554 4443347778876554
Q ss_pred eeEEEec-----CCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 97 EVQKLEF-----GAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 97 ~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
. ..+.. ...|.++..+++|.+.+++.+|-+..||.+
T Consensus 527 ~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~ 567 (781)
T 3v9f_A 527 V-RKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSAR 567 (781)
T ss_dssp E-EEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTT
T ss_pred E-EEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCC
Confidence 3 33321 245788888888887777665544777654
No 308
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.32 E-value=0.11 Score=33.89 Aligned_cols=92 Identities=10% Similarity=0.136 Sum_probs=63.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCC----CCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHS----SGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~ 76 (134)
++.|+|+++.+.++.+.-.+.++. ..|-.+. .|+..+ +..|+.|++.....+...+.-|. ..|-.-..+++.+
T Consensus 87 ~lQiFnle~K~klks~~~~e~Vvf-WkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~k 163 (494)
T 1bpo_A 87 TLQIFNIEMKSKMKAHTMTDDVTF-WKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQK 163 (494)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCE-EEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSS
T ss_pred eEEEEchHHhhhhcceecCCCceE-EEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCC
Confidence 478999999999999987777777 7776544 444443 35799999976556666666553 4566677788889
Q ss_pred EEEEee---C----CCcEEEEecCCC
Q psy6446 77 RLISCA---E----DKTVRLWDVSAS 95 (134)
Q Consensus 77 ~l~~~~---~----d~~i~~~d~~~~ 95 (134)
+++..+ . .|.+.+|....+
T Consensus 164 W~~l~GI~~~~~~v~G~mQLYS~er~ 189 (494)
T 1bpo_A 164 WLLLTGISAQQNRVVGAMQLYSVDRK 189 (494)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESTTC
T ss_pred eEEEEeecccCCcccceEEEeecccc
Confidence 887433 2 256777776544
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.06 E-value=0.19 Score=34.13 Aligned_cols=107 Identities=7% Similarity=-0.037 Sum_probs=68.1
Q ss_pred EEEccCCc-EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee--CCCcEEEEecCCCceeEEEe
Q psy6446 26 VHFATDSY-RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA--EDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 26 ~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~ 102 (134)
+++.+.+. ...+-...+.|.+.+++.... .......-.....+++.|....|+-.. ..+.|...++..........
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~ 163 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP 163 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC
Confidence 78876544 445555678899999875432 222324445678999998655555443 35678888776544333333
Q ss_pred cCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 103 FGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 103 ~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
.-.....+++++++..|..+ ..+.|..+|+.
T Consensus 164 ~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 164 NVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 34556899999987665544 45788888764
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.75 E-value=0.17 Score=31.15 Aligned_cols=103 Identities=7% Similarity=0.044 Sum_probs=57.8
Q ss_pred eEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEec--CCCceeEEEe
Q psy6446 25 SVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDV--SASAEVQKLE 102 (134)
Q Consensus 25 ~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~--~~~~~~~~~~ 102 (134)
.+.+.+++..++.+. ++.+.. ..+.+..-..........+..+.+.+++..++.+...+..+-.|- .+.+... ..
T Consensus 126 ~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~~ 202 (327)
T 2xbg_A 126 LIKALGNGSAEMITN-VGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN-RT 202 (327)
T ss_dssp EEEEEETTEEEEEET-TCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-CC
T ss_pred EEEEECCCCEEEEeC-CccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-CC
Confidence 366666666666554 454432 122222222223344567889999988877765544333333332 2222221 12
Q ss_pred cCCCCeEEEEccCCcEEEEecCCeEEEE
Q psy6446 103 FGAVPNSLEISRDGTTITVTHGSCVTFL 130 (134)
Q Consensus 103 ~~~~v~~~~~~~~~~~l~~~~~~~i~i~ 130 (134)
....+..+.+.+++..++++.+|.+.+.
T Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~G~~~~s 230 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLWMIVNGGKIAFS 230 (327)
T ss_dssp SSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred CCCccceeEECCCCCEEEEeCCceEEEe
Confidence 3456678888999888877777777665
No 311
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.71 E-value=0.16 Score=30.66 Aligned_cols=128 Identities=9% Similarity=-0.022 Sum_probs=63.0
Q ss_pred eeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCC----CeEEEEECCCCCCCCeEEeCCC-CCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSND----KNIRIYDLNKPDAEPTVYRGHS-SGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~~-~~v~~~~~~~~ 74 (134)
+.+||..+++-...-. ....... +. ..++..++.|+.+ ..+.+||..+..- ..+.... .........-+
T Consensus 26 ~~~~d~~~~~W~~~~~~p~~r~~~~-~~-~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~~ 101 (306)
T 3ii7_A 26 CRYFNPKDYSWTDIRCPFEKRRDAA-CV-FWDNVVYILGGSQLFPIKRMDCYNVVKDSW--YSKLGPPTPRDSLAACAAE 101 (306)
T ss_dssp EEEEETTTTEEEECCCCSCCCBSCE-EE-EETTEEEEECCBSSSBCCEEEEEETTTTEE--EEEECCSSCCBSCEEEEET
T ss_pred EEEecCCCCCEecCCCCCcccceeE-EE-EECCEEEEEeCCCCCCcceEEEEeCCCCeE--EECCCCCccccceeEEEEC
Confidence 5678887765432211 1111222 22 2366677777654 5688888876431 1111111 11111112236
Q ss_pred CCEEEEeeCC------CcEEEEecCCCceeEEEecC--CCCeEEEEccCCcEEEEec----------CCeEEEEeCCC
Q psy6446 75 NTRLISCAED------KTVRLWDVSASAEVQKLEFG--AVPNSLEISRDGTTITVTH----------GSCVTFLDANS 134 (134)
Q Consensus 75 ~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~----------~~~i~i~d~~t 134 (134)
++.++.|+.+ ..+.+||..+.+....-... ..-.++.. -+++.++.++ -..+.+||+++
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 6666777654 45889998876543322211 11122332 2556555542 24588888753
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.60 E-value=0.22 Score=31.36 Aligned_cols=95 Identities=8% Similarity=0.055 Sum_probs=60.2
Q ss_pred eeEEEccCCcEEEEec-----------------CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee-CCC
Q psy6446 24 SSVHFATDSYRLATGS-----------------NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA-EDK 85 (134)
Q Consensus 24 ~~~~~~~~~~~l~~~~-----------------~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~ 85 (134)
+-+.+.++|.+.++.. ..|.+..++. + .. ......-...+.++|+||++.++.+. ..+
T Consensus 168 ND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~-~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~ 243 (355)
T 3sre_A 168 NDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N-DV-RVVAEGFDFANGINISPDGKYVYIAELLAH 243 (355)
T ss_dssp EEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T-CC-EEEEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred ceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C-eE-EEeecCCcccCcceECCCCCEEEEEeCCCC
Confidence 4488888888766643 1245555554 2 22 22222335679999999998876554 567
Q ss_pred cEEEEecCC-Cce--eEEEecCCCCeEEEEcc-CCcEEEEe
Q psy6446 86 TVRLWDVSA-SAE--VQKLEFGAVPNSLEISR-DGTTITVT 122 (134)
Q Consensus 86 ~i~~~d~~~-~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~ 122 (134)
.|..|++.. ++. ...+......-.+++++ +|.+.+++
T Consensus 244 ~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 244 KIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred eEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEe
Confidence 899999863 322 22333355567889998 58877654
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.53 E-value=0.23 Score=31.15 Aligned_cols=103 Identities=9% Similarity=-0.005 Sum_probs=60.3
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe-----EEeCCCCCEeEEEEeeC---CCEEEEe---eCCCc
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT-----VYRGHSSGIKHVQFFKN---NTRLISC---AEDKT 86 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~---~~~l~~~---~~d~~ 86 (134)
+-..... ++|.|+|..+++-...|.|++++...+..... ......+....++++|+ +..|... ..++.
T Consensus 30 gL~~P~~-ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWG-LAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEE-EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceE-EEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3344444 99999998777766589999987654332110 11123456899999985 3444432 23455
Q ss_pred EEEEecCCC----------ceeE-EEec--CCCCeEEEEccCCcEEEE
Q psy6446 87 VRLWDVSAS----------AEVQ-KLEF--GAVPNSLEISRDGTTITV 121 (134)
Q Consensus 87 i~~~d~~~~----------~~~~-~~~~--~~~v~~~~~~~~~~~l~~ 121 (134)
|.-+....+ +.+. .+.. ......+.|.|||.+.++
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt 156 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAG 156 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEE
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEE
Confidence 666655441 1111 1211 123467999999986665
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.34 E-value=0.27 Score=30.86 Aligned_cols=88 Identities=10% Similarity=0.115 Sum_probs=62.5
Q ss_pred CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEE
Q psy6446 40 NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTI 119 (134)
Q Consensus 40 ~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l 119 (134)
.+.+|.+.|+..+..+.+..-. .-+.-.+|..+.++.-. ...+.++|+.+.+.+........|.--+|-.+ +.|
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~----AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L 120 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTV 120 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECC----CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEE
T ss_pred CCCEEEEEECCCCCCccccccc----cceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeE
Confidence 3447899999886654322111 12344578888776654 67899999999999998888888888888755 455
Q ss_pred EEecCCeEEEEeCC
Q psy6446 120 TVTHGSCVTFLDAN 133 (134)
Q Consensus 120 ~~~~~~~i~i~d~~ 133 (134)
+.-.+..|+.|+++
T Consensus 121 ~lVT~taVyHWs~~ 134 (365)
T 2xzh_A 121 ALVTDNAVYHWSME 134 (365)
T ss_dssp EEEESSEEEEEESS
T ss_pred EEEcCCcEEEEccc
Confidence 55556788889875
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.17 E-value=0.26 Score=29.69 Aligned_cols=128 Identities=16% Similarity=0.139 Sum_probs=61.1
Q ss_pred eeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCC-------CeEEEEECCCCCCCCeEEeCCCCC-EeEEEE
Q psy6446 2 GTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSND-------KNIRIYDLNKPDAEPTVYRGHSSG-IKHVQF 71 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d-------~~v~i~~~~~~~~~~~~~~~~~~~-v~~~~~ 71 (134)
+.+||+.+.+-...-. ....... +.. .+++.++.|+.+ ..+.+||+.+..- ........+ ......
T Consensus 126 ~~~~d~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~ 201 (302)
T 2xn4_A 126 VEAYNIKSNEWFHVAPMNTRRSSVG-VGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEW--TYIAEMSTRRSGAGVG 201 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCE-EEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEE--EEECCCSSCCBSCEEE
T ss_pred EEEEeCCCCeEeecCCCCCcccCce-EEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE--EECCCCccccccccEE
Confidence 4577777655433211 1111122 222 256666776542 3578888876421 111111111 111111
Q ss_pred eeCCCEEEEeeCC-----CcEEEEecCCCceeEEEecC--CCCeEEEEccCCcEEEEe-cC-----CeEEEEeCCC
Q psy6446 72 FKNNTRLISCAED-----KTVRLWDVSASAEVQKLEFG--AVPNSLEISRDGTTITVT-HG-----SCVTFLDANS 134 (134)
Q Consensus 72 ~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~-~~-----~~i~i~d~~t 134 (134)
..+++.++.|+.+ ..+.+||+.+.+....-... ..-.++.. .+++.++.| .+ ..+.+||+++
T Consensus 202 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 202 VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 2266666777654 36889998876544322211 11122322 255665554 22 3689998764
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.14 E-value=0.11 Score=32.52 Aligned_cols=101 Identities=9% Similarity=0.035 Sum_probs=60.1
Q ss_pred eeEeecCCCceeeEEeeC--CCceeeEEE--cc-CCcEEEEe-cCCCeEEEEECCCCCCCCeEEeC----CCCCEeE-E-
Q psy6446 2 GTVWDAVSGEELHSFQHP--HIVKSSVHF--AT-DSYRLATG-SNDKNIRIYDLNKPDAEPTVYRG----HSSGIKH-V- 69 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~--~~~~~~~~~--~~-~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~----~~~~v~~-~- 69 (134)
|.-.|..+|+.+..++.. ...+. ..- .+ ++..++.. +.||.+..++..++.... .+.. ...++.. .
T Consensus 22 l~Ald~~tG~~~W~~~~~~~~p~~~-~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~-~~~~~~lv~~SP~~~~~~ 99 (339)
T 2be1_A 22 LHAVDRRNGHIIWSIEPENFQPLIE-IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL-PLSIRQLVSTSPLHLKTN 99 (339)
T ss_dssp EEEEETTTTEEEEEECGGGSCCSEE-CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE-EEEHHHHHTTCSEEEECC
T ss_pred EEEEECCCCcEEEEecCCccCCcEE-ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe-eeccccceeccccccCCC
Confidence 567788899999998854 22222 110 01 22333343 689999999987653211 1110 1111111 0
Q ss_pred -EE-----eeCCCEEEEeeCCCcEEEEecCCCceeEEEecC
Q psy6446 70 -QF-----FKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG 104 (134)
Q Consensus 70 -~~-----~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 104 (134)
.. .-.+..+++++.++.+...|..+|+.+..+...
T Consensus 100 pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 100 IVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp ----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 00 004567889999999999999999999988754
No 317
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.96 E-value=0.45 Score=34.03 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=32.9
Q ss_pred CEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe
Q psy6446 65 GIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 102 (134)
.+.++...++..++++.+.|+.+++|++.+++++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677777788899999999999999999999888765
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.94 E-value=0.31 Score=29.32 Aligned_cols=130 Identities=9% Similarity=0.010 Sum_probs=63.2
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC-----CeEEEEECCCCCCCCeEEeCCCCC-EeEEEEeeCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND-----KNIRIYDLNKPDAEPTVYRGHSSG-IKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~ 75 (134)
+.+||+.+.+-...-..+...........+++.++.|+.+ ..+.+||+.+..- ........+ ........++
T Consensus 130 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~~~ 207 (301)
T 2vpj_A 130 MERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHW--TNVTPMATKRSGAGVALLND 207 (301)
T ss_dssp EEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE--EEECCCSSCCBSCEEEEETT
T ss_pred EEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcE--EeCCCCCcccccceEEEECC
Confidence 5678877665433222111111112222367777777654 4588888876421 111111111 1111122256
Q ss_pred CEEEEeeCC-----CcEEEEecCCCceeEEEec--CCCCeEEEEccCCcEEEEe-cC-----CeEEEEeCCC
Q psy6446 76 TRLISCAED-----KTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTTITVT-HG-----SCVTFLDANS 134 (134)
Q Consensus 76 ~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~-~~-----~~i~i~d~~t 134 (134)
+.++.|+.+ ..+.+||+.+.+....-.. ...-.++.. -+++.++.+ .+ ..+.+||+++
T Consensus 208 ~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 208 HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV-LRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp EEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred EEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE-ECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 666676654 4689999987654433221 111122222 256665554 22 4688888763
No 319
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.85 E-value=0.31 Score=36.63 Aligned_cols=92 Identities=9% Similarity=0.117 Sum_probs=60.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC----CCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH----SSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~ 76 (134)
++.|+|+.+.+.++.+.-...++. ..|-.+. .|+..+ +..|+.|++.....+...+.-| ...|-.-..+++.+
T Consensus 87 ~lQiFnl~~k~klks~~~~e~Vvf-WkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~k 163 (1630)
T 1xi4_A 87 TLQIFNIEMKSKMKAHTMTDDVTF-WKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQK 163 (1630)
T ss_pred eEEEeehHHhhhhcccccCCCceE-EEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCC
Confidence 467888888888888877777776 7776443 344433 3579999997644454444444 35677777788889
Q ss_pred EEEEee-------CCCcEEEEecCCC
Q psy6446 77 RLISCA-------EDKTVRLWDVSAS 95 (134)
Q Consensus 77 ~l~~~~-------~d~~i~~~d~~~~ 95 (134)
+++..| -.|.+.+|....+
T Consensus 164 W~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 164 WLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred eEEEEeeccCCCcccceeeeeecccc
Confidence 887433 2366777766543
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.85 E-value=0.35 Score=29.41 Aligned_cols=96 Identities=9% Similarity=0.077 Sum_probs=46.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC-C-----CeEEEEECCCCCCCCeEEeCCC-CCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN-D-----KNIRIYDLNKPDAEPTVYRGHS-SGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d-----~~v~i~~~~~~~~~~~~~~~~~-~~v~~~~~~~~ 74 (134)
+.+||..+.+-...-..+...........+++.++.|+. + ..+.+||..+..- ....... ......+..-+
T Consensus 119 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~~ 196 (315)
T 4asc_A 119 VMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW--KELAPMQTARSLFGATVHD 196 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEE--EECCCCSSCCBSCEEEEET
T ss_pred EEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeE--EECCCCCCchhceEEEEEC
Confidence 567787765432211111111111222246667777765 2 3688888876421 1111000 11111122226
Q ss_pred CCEEEEeeCCC-----cEEEEecCCCceeE
Q psy6446 75 NTRLISCAEDK-----TVRLWDVSASAEVQ 99 (134)
Q Consensus 75 ~~~l~~~~~d~-----~i~~~d~~~~~~~~ 99 (134)
++.++.|+.++ .+.+||+.+.+-..
T Consensus 197 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 197 GRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp TEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred CEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 66667776543 47888887765443
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.84 E-value=0.34 Score=29.34 Aligned_cols=128 Identities=13% Similarity=0.078 Sum_probs=61.6
Q ss_pred eeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCC-----CeEEEEECCCCCCCC-eEEeCCCCCEeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSND-----KNIRIYDLNKPDAEP-TVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~ 73 (134)
+.+||..+.+-...-. .......++.+ ++..++.|+.+ ..+.+||+.+..-.. ............+. -
T Consensus 139 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~ 214 (308)
T 1zgk_A 139 VERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV--L 214 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--E
T ss_pred EEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE--E
Confidence 5677777654332211 11112221222 56777777654 458888887642100 00011111111222 2
Q ss_pred CCCEEEEeeCC-----CcEEEEecCCCceeEEEec--CCCCeEEEEccCCcEEEEec------CCeEEEEeCCC
Q psy6446 74 NNTRLISCAED-----KTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTTITVTH------GSCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~------~~~i~i~d~~t 134 (134)
+++.++.|+.+ ..+.+||+.+.+-...-.. ...-.++... ++++++.|+ -..+.+||+++
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCC
Confidence 66666676654 4689999887654332111 1112233332 556655542 25788998764
No 322
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.81 E-value=0.015 Score=36.21 Aligned_cols=69 Identities=7% Similarity=-0.018 Sum_probs=37.3
Q ss_pred cEEEEecCCCeEEEEECCCCCCCCeEEeCC-CCCEeEEEE--eeCCCEEEEe--eCCCcEEEEecCCCceeEEEe
Q psy6446 33 YRLATGSNDKNIRIYDLNKPDAEPTVYRGH-SSGIKHVQF--FKNNTRLISC--AEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 33 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~l~~~--~~d~~i~~~d~~~~~~~~~~~ 102 (134)
..+++++.||.+.-.|..+++.... +... ..++....- .+.+..++.+ ..||.+..++..+|.....+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~-~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~ 84 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWS-IEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS 84 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEE-ECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEE-ecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec
Confidence 4677777888888888776553322 2111 011111100 0112233333 689999999988886655444
No 323
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.72 E-value=0.5 Score=30.71 Aligned_cols=103 Identities=12% Similarity=0.102 Sum_probs=57.8
Q ss_pred CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC-eEEe------CCCCCEeEEEEeeC---CCEEEEeeC-----
Q psy6446 19 PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP-TVYR------GHSSGIKHVQFFKN---NTRLISCAE----- 83 (134)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~-~~~~------~~~~~v~~~~~~~~---~~~l~~~~~----- 83 (134)
-..... ++|.|+|+++++-...+.|++++...+.... ..+. ...+....++|+|+ +..|.....
T Consensus 26 l~~P~~-~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHA-LLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEE-EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceE-EEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 334444 9999999877776554578888765433111 0111 12456779999995 555544332
Q ss_pred --------CCcEEEEecCCC--c-----eeE-EEec--CCCCeEEEEccCCcEEEEe
Q psy6446 84 --------DKTVRLWDVSAS--A-----EVQ-KLEF--GAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 84 --------d~~i~~~d~~~~--~-----~~~-~~~~--~~~v~~~~~~~~~~~l~~~ 122 (134)
...|.-++.... + .+. .+.. ......+.|.|||.+.++.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~ 161 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTI 161 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEE
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEE
Confidence 234555655332 1 111 1111 1335789999999876653
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.25 E-value=1.1 Score=32.83 Aligned_cols=126 Identities=13% Similarity=0.085 Sum_probs=67.1
Q ss_pred eeEeecCCCceee--EEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELH--SFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
|.+|++..++... ..+..+.+..-..| +| +|++|- .+.+++|++...+........+ ..+..+.....+++++
T Consensus 866 i~vf~v~~~kL~lv~~~~v~g~v~al~~~--~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l~~~~~~I~ 940 (1158)
T 3ei3_A 866 IVVFQYSDGKLQTVAEKEVKGAVYSMVEF--NG-KLLASI-NSTVRLYEWTTEKELRTECNHY-NNIMALYLKTKGDFIL 940 (1158)
T ss_dssp EEEEEEETTEEEEEEEEEESSCEEEEEEE--TT-EEEEEE-TTEEEEEEECTTSCEEEEEEEC-CCSCEEEEEEETTEEE
T ss_pred EEEEEEECCEEEEEEEEEcCCcCEEEeee--CC-EEEEEc-CCEEEEEECCCCceEEEEeecc-ccEEEEEEeccCCEEE
Confidence 5566665443322 22234444442334 45 444443 3689999997644322111112 1233333334578888
Q ss_pred EeeCCCcEEEEecC--CCceeEEEe--cCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 80 SCAEDKTVRLWDVS--ASAEVQKLE--FGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 80 ~~~~d~~i~~~d~~--~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
.|.....+.+...+ .++....-. ....+.++.+-.++.++.+-.+|+|.++..
T Consensus 941 vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 941 VGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQK 997 (1158)
T ss_dssp EEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEE
T ss_pred EEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEec
Confidence 88887777766544 222222222 244567788766655555556788888754
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.08 E-value=0.54 Score=28.38 Aligned_cols=130 Identities=11% Similarity=0.071 Sum_probs=61.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC------CeEEEEECCCCCCCCeEEeCCC-CCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND------KNIRIYDLNKPDAEPTVYRGHS-SGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~~-~~v~~~~~~~~ 74 (134)
+.+||..+.+-...-..+...........+++.++.|+.+ ..+.+||..+..- ....... ..........+
T Consensus 72 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~~ 149 (306)
T 3ii7_A 72 MDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESW--HTKPSMLTQRCSHGMVEAN 149 (306)
T ss_dssp EEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEE--EEECCCSSCCBSCEEEEET
T ss_pred EEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCce--EeCCCCcCCcceeEEEEEC
Confidence 4678877765433222111111112222366777777654 4588888876431 1111111 11111111225
Q ss_pred CCEEEEeeC---------CCcEEEEecCCCceeEEEecC--CCCeEEEEccCCcEEEEec-C-----CeEEEEeCCC
Q psy6446 75 NTRLISCAE---------DKTVRLWDVSASAEVQKLEFG--AVPNSLEISRDGTTITVTH-G-----SCVTFLDANS 134 (134)
Q Consensus 75 ~~~l~~~~~---------d~~i~~~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~t 134 (134)
++.++.|+. -..+.+||+.+.+....-... ..-.++... +++.++.|+ + ..+.+||+++
T Consensus 150 ~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 150 GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTT
T ss_pred CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCC
Confidence 666666553 345889998876543322211 111233333 555555542 1 4688888753
No 326
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.06 E-value=0.57 Score=28.68 Aligned_cols=88 Identities=6% Similarity=-0.006 Sum_probs=50.8
Q ss_pred EEEccCCcEEEEec----CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeC-CCcEEEEecCCCceeEE
Q psy6446 26 VHFATDSYRLATGS----NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAE-DKTVRLWDVSASAEVQK 100 (134)
Q Consensus 26 ~~~~~~~~~l~~~~----~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~ 100 (134)
..|+++++.|+-.. .+..|+..+++... ...+..+.. .+++++++.|.-.+. ...|...++..+.....
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALF 182 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence 46778888887664 33456666665432 233444432 456778888774443 56788888766554433
Q ss_pred EecCCCCeEEEEccCCcEEEEe
Q psy6446 101 LEFGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 101 ~~~~~~v~~~~~~~~~~~l~~~ 122 (134)
+. ... ...++|++.+|+-.
T Consensus 183 ~~--~~~-~~~~~P~g~~iy~t 201 (302)
T 3s25_A 183 YD--CNC-YKPVVLDDTNVYYM 201 (302)
T ss_dssp EC--SCE-EEEEEEETTEEEEE
T ss_pred eC--CCc-cceeeecCCEEEEE
Confidence 22 222 23356888777643
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.98 E-value=0.98 Score=31.09 Aligned_cols=131 Identities=10% Similarity=0.049 Sum_probs=66.0
Q ss_pred eeEeecCCCceeeEE-e------eCCCceeeEEEcc-CCcEEEEecCC------CeEEEEECCCCCCCCeEEeCCC-CCE
Q psy6446 2 GTVWDAVSGEELHSF-Q------HPHIVKSSVHFAT-DSYRLATGSND------KNIRIYDLNKPDAEPTVYRGHS-SGI 66 (134)
Q Consensus 2 i~v~d~~~~~~~~~~-~------~~~~~~~~~~~~~-~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~~-~~v 66 (134)
+.+||..+++-...- . .......++...+ ++..++.|+.+ ..+.+||..+..- ....... ...
T Consensus 414 v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W--~~~~~~p~~R~ 491 (695)
T 2zwa_A 414 ILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREW--SMIKSLSHTRF 491 (695)
T ss_dssp EEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEE--EECCCCSBCCB
T ss_pred EEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcE--EECCCCCCCcc
Confidence 567888776543322 1 1111222233333 67777777643 3577888776321 0110000 111
Q ss_pred -eEEEEeeCCCEEEEeeCCC--cEEEEecCCCceeEEEe-----cC-CCCeEEEEccC-CcEEEEe-c--C-----CeEE
Q psy6446 67 -KHVQFFKNNTRLISCAEDK--TVRLWDVSASAEVQKLE-----FG-AVPNSLEISRD-GTTITVT-H--G-----SCVT 128 (134)
Q Consensus 67 -~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~-----~~-~~v~~~~~~~~-~~~l~~~-~--~-----~~i~ 128 (134)
.++....+++.++.|+.++ .+.+||..+.+....-. .. .....+.+..+ +..++.| . + +.+.
T Consensus 492 ~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~ 571 (695)
T 2zwa_A 492 RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAI 571 (695)
T ss_dssp SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEE
T ss_pred cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEE
Confidence 1222223777777777654 68999988765433221 11 11233555555 5555554 2 2 4688
Q ss_pred EEeCCC
Q psy6446 129 FLDANS 134 (134)
Q Consensus 129 i~d~~t 134 (134)
+||+.+
T Consensus 572 ~yd~~~ 577 (695)
T 2zwa_A 572 IFKYDA 577 (695)
T ss_dssp EEEECT
T ss_pred EEEccC
Confidence 888753
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.96 E-value=0.81 Score=30.05 Aligned_cols=88 Identities=10% Similarity=0.115 Sum_probs=63.1
Q ss_pred CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEE
Q psy6446 40 NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTI 119 (134)
Q Consensus 40 ~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l 119 (134)
.+..+.+.|+..+..+.+..- ..-+.-.+|..+.++.-. ...+.+||+.+.+.+........|.--+|-.+ +.|
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi----~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l 119 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPI----SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTV 119 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEEC----CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEE
T ss_pred CCCeEEEEECCCCCcceeccc----ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeE
Confidence 345899999988665432211 123344677777776554 67899999999999998888888888888755 455
Q ss_pred EEecCCeEEEEeCC
Q psy6446 120 TVTHGSCVTFLDAN 133 (134)
Q Consensus 120 ~~~~~~~i~i~d~~ 133 (134)
+.-.+..|+.|+++
T Consensus 120 ~lVT~taVyHWsi~ 133 (494)
T 1bpo_A 120 ALVTDNAVYHWSME 133 (494)
T ss_dssp EEECSSEEEEEESS
T ss_pred EEEcCCeeEEeccc
Confidence 55567888999874
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.94 E-value=0.81 Score=29.93 Aligned_cols=105 Identities=16% Similarity=0.135 Sum_probs=57.9
Q ss_pred eCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCC--CCCeE----E-eC----CCCCEeEEEEeeC---CCEE-EEe
Q psy6446 18 HPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPD--AEPTV----Y-RG----HSSGIKHVQFFKN---NTRL-ISC 81 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~--~~~~~----~-~~----~~~~v~~~~~~~~---~~~l-~~~ 81 (134)
.-..... ++|.|++. .++++...|.|++++..... ..... + .+ .......++|+|+ ..+| ++-
T Consensus 12 gL~~P~~-~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~y 90 (463)
T 2wg3_C 12 GLRQPVG-ALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSY 90 (463)
T ss_dssp EESSEEE-EECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEE
T ss_pred CCCCceE-EEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEE
Confidence 3344555 99999986 56666778999999754321 11111 1 11 1456889999986 2333 332
Q ss_pred eC--C----------CcEEEEecCC----------CceeEEEec---CCCCeEEEEccCCcEEEEec
Q psy6446 82 AE--D----------KTVRLWDVSA----------SAEVQKLEF---GAVPNSLEISRDGTTITVTH 123 (134)
Q Consensus 82 ~~--d----------~~i~~~d~~~----------~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~ 123 (134)
+. + ..|.-|.+.. .+.+..+.. ......+.|.|||.+.++..
T Consensus 91 t~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 91 TTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp EECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred eCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 21 1 1344455432 122233321 22357899999997666543
No 330
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.76 E-value=0.68 Score=28.48 Aligned_cols=104 Identities=10% Similarity=0.010 Sum_probs=59.3
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 102 (134)
+..+.+.+++..++.+...+..+-.|-. +..-..........+..+.+.++++.+ .++.+|.+.+.+...++.-..+.
T Consensus 165 ~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~ 242 (327)
T 2xbg_A 165 MRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELL 242 (327)
T ss_dssp EEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCB
T ss_pred eEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEecc
Confidence 4448888888877776544333333321 121111223345678888888887655 55567777766422232222221
Q ss_pred c-----CCCCeEEEEccCCcEEEEecCCeEE
Q psy6446 103 F-----GAVPNSLEISRDGTTITVTHGSCVT 128 (134)
Q Consensus 103 ~-----~~~v~~~~~~~~~~~l~~~~~~~i~ 128 (134)
. ...+..+.+.+++..++++.++.|.
T Consensus 243 ~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~ 273 (327)
T 2xbg_A 243 SPLRRNSVGFLDLAYRTPNEVWLAGGAGALL 273 (327)
T ss_dssp CTTSSCCSCEEEEEESSSSCEEEEESTTCEE
T ss_pred CCcccCCcceEEEEecCCCEEEEEeCCCeEE
Confidence 1 1246788888888888887777663
No 331
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.72 E-value=0.63 Score=27.97 Aligned_cols=131 Identities=9% Similarity=-0.030 Sum_probs=63.3
Q ss_pred eeEeecCCCceeeEEeeCC-CceeeEEEccCCcEEEEecCC-----CeEEEEECCCCCCC-CeEEeCCC-CCEeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQHPH-IVKSSVHFATDSYRLATGSND-----KNIRIYDLNKPDAE-PTVYRGHS-SGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~-~~~~~~~~-~~v~~~~~~~ 73 (134)
+.+||..+.+-...-..+. .... .....++..++.|+.+ ..+.+||+.+.... ......-. ..........
T Consensus 33 ~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~ 111 (301)
T 2vpj_A 33 VEKYDPKTQEWSFLPSITRKRRYV-ASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL 111 (301)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSC-EEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE
T ss_pred EEEEcCCCCeEEeCCCCChhhccc-cEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE
Confidence 5678877665332111111 1112 2222356777777754 36889998775410 11111111 1111111222
Q ss_pred CCCEEEEeeCC-----CcEEEEecCCCceeEEEecC--CCCeEEEEccCCcEEEEe-cC-----CeEEEEeCCC
Q psy6446 74 NNTRLISCAED-----KTVRLWDVSASAEVQKLEFG--AVPNSLEISRDGTTITVT-HG-----SCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~-~~-----~~i~i~d~~t 134 (134)
+++.++.|+.+ ..+.+||+.+.+....-... ..-.++.. .+++.++.| .+ ..+.+||+.+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCC
Confidence 56666666643 35888998776544432222 11122322 256655554 22 5688888753
No 332
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.63 E-value=1.1 Score=30.45 Aligned_cols=108 Identities=8% Similarity=0.009 Sum_probs=66.7
Q ss_pred eEEEccCCc-EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee--CCCcEEEEecCCCceeEEE
Q psy6446 25 SVHFATDSY-RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA--EDKTVRLWDVSASAEVQKL 101 (134)
Q Consensus 25 ~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~ 101 (134)
.+++++.+. ...+-...+.|.+.+++.... .......-.....+++.|.+..|+-.. ..+.|...++.........
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~ 166 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 166 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCE-EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE
Confidence 388888544 445556678999999876432 223334445678999999755554433 2456777776543332222
Q ss_pred e-cCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 102 E-FGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 102 ~-~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
. .-.....+++++++..|..+ ..+.|..+|+.
T Consensus 167 ~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 167 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 2 22456899999876655544 45788887764
No 333
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.55 E-value=0.63 Score=31.51 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=49.0
Q ss_pred CCEeEEEEeeCCCEEEEee-CCCcEEEEecCCC------ce-------eEEEecCCCCeEEEEccCCcEEEEe-cCCeEE
Q psy6446 64 SGIKHVQFFKNNTRLISCA-EDKTVRLWDVSAS------AE-------VQKLEFGAVPNSLEISRDGTTITVT-HGSCVT 128 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~------~~-------~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~ 128 (134)
.....+..+|||++++.++ .+.++.++|+..- +. .......-.....+|+++|....+- -|.+|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 4557788999999987655 4788999998742 11 2222234556889999999433333 689999
Q ss_pred EEeCC
Q psy6446 129 FLDAN 133 (134)
Q Consensus 129 i~d~~ 133 (134)
.|++.
T Consensus 403 kWni~ 407 (638)
T 3sbq_A 403 KWNME 407 (638)
T ss_dssp EEEHH
T ss_pred EEecc
Confidence 99874
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.54 E-value=1.2 Score=30.66 Aligned_cols=133 Identities=14% Similarity=0.127 Sum_probs=65.1
Q ss_pred eeEeecCCCceeeEEeeC-CCceeeEEEccCCcEEEEecCCC--eEEEEECCCCCCCCeE----EeCCCCCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELHSFQHP-HIVKSSVHFATDSYRLATGSNDK--NIRIYDLNKPDAEPTV----YRGHSSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~--~v~i~~~~~~~~~~~~----~~~~~~~v~~~~~~~~ 74 (134)
+.+||..+.+-...-..+ .....+...-.++..++.|+.++ .+.+||..+..-.... ..........+.+..+
T Consensus 470 v~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 470 NWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp CEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred EEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 467777765432221111 11222233323777888887654 6888998764311000 0011112233444444
Q ss_pred -CCEEEEeeC--C-----CcEEEEecCCCc------eeEEEe---cCCCCeEEEEccCCcEEEEec---------CCeEE
Q psy6446 75 -NTRLISCAE--D-----KTVRLWDVSASA------EVQKLE---FGAVPNSLEISRDGTTITVTH---------GSCVT 128 (134)
Q Consensus 75 -~~~l~~~~~--d-----~~i~~~d~~~~~------~~~~~~---~~~~v~~~~~~~~~~~l~~~~---------~~~i~ 128 (134)
++.++.|+. + +.+..||+.+.. ...... ....-.++....++..++.|+ ...+.
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 556666655 2 358899988776 222111 111122344444366666542 24688
Q ss_pred EEeCCC
Q psy6446 129 FLDANS 134 (134)
Q Consensus 129 i~d~~t 134 (134)
+||+.+
T Consensus 630 ~yd~~t 635 (695)
T 2zwa_A 630 SLDPLS 635 (695)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 998764
No 335
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=93.36 E-value=0.74 Score=31.18 Aligned_cols=57 Identities=18% Similarity=0.115 Sum_probs=40.2
Q ss_pred EeEEEEeeCCCEEEEeeCC------------CcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEEe
Q psy6446 66 IKHVQFFKNNTRLISCAED------------KTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~ 122 (134)
.-.+.|+|.++.++.-..+ +.+.+.+..+++..+.+. ...+++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678899999876654322 345666666676655554 46789999999999887764
No 336
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.84 E-value=1.1 Score=28.03 Aligned_cols=67 Identities=13% Similarity=0.056 Sum_probs=41.7
Q ss_pred CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCcee--EEEe----cCCCCeEEEEccC---CcEEEEe--cC-----Ce
Q psy6446 63 SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEV--QKLE----FGAVPNSLEISRD---GTTITVT--HG-----SC 126 (134)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~----~~~~v~~~~~~~~---~~~l~~~--~~-----~~ 126 (134)
-.....++|.|+++.+++ ..++.|.+++ +++.. ..+. .......++++|+ +..+.++ .. +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345789999999985554 5568899988 34322 1111 1245689999998 4444332 22 56
Q ss_pred EEEEeC
Q psy6446 127 VTFLDA 132 (134)
Q Consensus 127 i~i~d~ 132 (134)
|..++.
T Consensus 107 v~r~~~ 112 (352)
T 2ism_A 107 VVRLRH 112 (352)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 766664
No 337
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.74 E-value=0.95 Score=27.23 Aligned_cols=128 Identities=11% Similarity=0.061 Sum_probs=60.0
Q ss_pred eeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCCC-----eEEEEECCCCCCCCeEEeCCCCC-EeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDK-----NIRIYDLNKPDAEPTVYRGHSSG-IKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~~~~-v~~~~~~~ 73 (134)
+.+||..+.+-...-. ....... +.. .++..++.|+.++ .+.+||+.+..- ........+ ........
T Consensus 79 ~~~~d~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~ 154 (302)
T 2xn4_A 79 VDSYDPVKDQWTSVANMRDRRSTLG-AAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEW--FHVAPMNTRRSSVGVGVV 154 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCE-EEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEE--EEECCCSSCCBSCEEEEE
T ss_pred eEEECCCCCceeeCCCCCccccceE-EEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeE--eecCCCCCcccCceEEEE
Confidence 5677777655332222 1111122 222 2567777776543 577888776321 111111111 11111122
Q ss_pred CCCEEEEeeCC-------CcEEEEecCCCceeEEEec--CCCCeEEEEccCCcEEEEe-cC-----CeEEEEeCCC
Q psy6446 74 NNTRLISCAED-------KTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTTITVT-HG-----SCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~-~~-----~~i~i~d~~t 134 (134)
+++.++.|+.+ ..+..||+.+.+-...-.. ...-.++... ++..++.| .+ ..+.+||+++
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCC
Confidence 56666665542 3588899887654432221 1111233322 45655554 22 4788898763
No 338
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.65 E-value=1 Score=27.29 Aligned_cols=128 Identities=8% Similarity=-0.014 Sum_probs=60.1
Q ss_pred eeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCC-----CeEEEEECCCCCCC-CeEEeCCCCCEeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSND-----KNIRIYDLNKPDAE-PTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~-~~~~~~~~~~v~~~~~~~ 73 (134)
+.+||..+.+-...-. .......++. .+++.++.|+.+ ..+.+||..+..-. .............+. -
T Consensus 92 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~ 167 (308)
T 1zgk_A 92 LDCYNPMTNQWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV--L 167 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--E
T ss_pred EEEECCCCCeEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE--E
Confidence 5677776654322111 1111122122 266777777643 35788888763210 000011111111222 2
Q ss_pred CCCEEEEeeCC-----CcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEEe-cC-----CeEEEEeCCC
Q psy6446 74 NNTRLISCAED-----KTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVT-HG-----SCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~-----~~i~i~d~~t 134 (134)
+++.++.|+.+ ..+..||+.+.+-...-. ....-.++... ++..++.+ .+ ..+.+||+++
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCC
Confidence 56666666654 458889987765432211 11111233332 55555554 22 5788888753
No 339
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.69 E-value=0.3 Score=35.52 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=31.7
Q ss_pred CEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe
Q psy6446 65 GIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 102 (134)
.+.++...++..++++.+.|+.+++|++.+++++....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34555666788899999999999999999999888765
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.46 E-value=1.5 Score=26.67 Aligned_cols=94 Identities=14% Similarity=0.104 Sum_probs=44.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC------CCeEEEEECCCCCCCCeEEeCCCC-CE-eEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN------DKNIRIYDLNKPDAEPTVYRGHSS-GI-KHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------d~~v~i~~~~~~~~~~~~~~~~~~-~v-~~~~~~~ 73 (134)
+.+||..+.+-...-..+...........+++.++.|+. -..+.+||+.+..- ........ .. .++. .-
T Consensus 129 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~-~~ 205 (318)
T 2woz_A 129 VLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW--KDLAPMKTPRSMFGVA-IH 205 (318)
T ss_dssp EEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEE--EEECCCSSCCBSCEEE-EE
T ss_pred EEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEE--EECCCCCCCcccceEE-EE
Confidence 456777665533221211111111122246667777764 23588899876431 11111111 11 1122 22
Q ss_pred CCCEEEEeeCC-----CcEEEEecCCCcee
Q psy6446 74 NNTRLISCAED-----KTVRLWDVSASAEV 98 (134)
Q Consensus 74 ~~~~l~~~~~d-----~~i~~~d~~~~~~~ 98 (134)
+++.++.|+.+ ..+.+||+.+.+-.
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 56666666543 24678888776543
No 341
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.83 E-value=1.7 Score=26.32 Aligned_cols=101 Identities=9% Similarity=0.006 Sum_probs=49.3
Q ss_pred CCcEEEEecCC--------CeEEEEECCCCCCCCeEEeCC-CCCEeEEEEeeCCCEEEEeeC-C-----CcEEEEecCCC
Q psy6446 31 DSYRLATGSND--------KNIRIYDLNKPDAEPTVYRGH-SSGIKHVQFFKNNTRLISCAE-D-----KTVRLWDVSAS 95 (134)
Q Consensus 31 ~~~~l~~~~~d--------~~v~i~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d-----~~i~~~d~~~~ 95 (134)
++..++.|+.+ ..+.+||..+..- .....- ...........+++.++.|+. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW--GESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEE--EECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcE--eECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 56666777632 3588888876421 111000 011111122236666666665 2 36889998876
Q ss_pred ceeEEEec--CCCCeEEEEccCCcEEEEe-cC-----CeEEEEeCCC
Q psy6446 96 AEVQKLEF--GAVPNSLEISRDGTTITVT-HG-----SCVTFLDANS 134 (134)
Q Consensus 96 ~~~~~~~~--~~~v~~~~~~~~~~~l~~~-~~-----~~i~i~d~~t 134 (134)
+-...-.. ...-.++... +++.++.| .+ ..+.+||+++
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred eEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCC
Confidence 54332111 1111233322 55555544 32 2688888754
No 342
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.33 E-value=2.2 Score=26.70 Aligned_cols=50 Identities=10% Similarity=0.004 Sum_probs=33.1
Q ss_pred CCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc-eeEEEe----cCCCCeEEEEccC
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA-EVQKLE----FGAVPNSLEISRD 115 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~----~~~~v~~~~~~~~ 115 (134)
.....++|.|+++.++ +..++.|.++| .+++ .+..+. .......++++|+
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pd 83 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPE 83 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCC
Confidence 4578999999998554 45568999887 4454 111111 1245688999997
No 343
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.23 E-value=2.3 Score=26.76 Aligned_cols=53 Identities=13% Similarity=0.047 Sum_probs=37.1
Q ss_pred CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-------cCCCCeEEEEccC
Q psy6446 63 SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-------FGAVPNSLEISRD 115 (134)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-------~~~~v~~~~~~~~ 115 (134)
-.....++|.|+++.+++-...|.|.+++..+++...... .......++++|+
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 4567899999999977776658999999866555322211 1234678999995
No 344
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=90.16 E-value=0.96 Score=31.42 Aligned_cols=31 Identities=16% Similarity=0.430 Sum_probs=27.6
Q ss_pred eCCCEEEEeeCCCcEEEEecCCCceeEEEec
Q psy6446 73 KNNTRLISCAEDKTVRLWDVSASAEVQKLEF 103 (134)
Q Consensus 73 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 103 (134)
.+..++++-+.|..+++|++.+++++.....
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3688999999999999999999998887764
No 345
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=90.10 E-value=1.9 Score=29.27 Aligned_cols=55 Identities=11% Similarity=0.121 Sum_probs=35.1
Q ss_pred EEEccCCcEEEEecCC------------CeEEEEECCCCCCCCeEEeCC-CCCEeEEEEeeCCCEEEEe
Q psy6446 26 VHFATDSYRLATGSND------------KNIRIYDLNKPDAEPTVYRGH-SSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d------------~~v~i~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 81 (134)
+.|+|.|++++.-..+ ..+.+.+..+++ +.+++.+. ..+++.+.|+||++.|+..
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~-~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe-EEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 8899999877664432 234444444433 33444443 4689999999999887654
No 346
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.84 E-value=2.9 Score=27.28 Aligned_cols=53 Identities=4% Similarity=-0.058 Sum_probs=34.5
Q ss_pred CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEec---------CCCCeEEEEccC
Q psy6446 63 SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEF---------GAVPNSLEISRD 115 (134)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~---------~~~v~~~~~~~~ 115 (134)
-.....|+|.|+++.+++-...+.|.+++..+++....... ......++|+|+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 34568999999999777655445788887655543322221 123458999995
No 347
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=89.81 E-value=3.4 Score=28.10 Aligned_cols=59 Identities=15% Similarity=0.070 Sum_probs=40.9
Q ss_pred CCEeEEEEeeCCCEEEEeeC------------CCcEEEEecCCCceeEEEec--CCCCeEEEEccCCcEEEEe
Q psy6446 64 SGIKHVQFFKNNTRLISCAE------------DKTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~------------d~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~ 122 (134)
.....+.|.++|...+.... ...+..++..+++....+.. ..+++.++|+||++.|.++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 34678999999887773221 22566677767776555542 3568999999999887764
No 348
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.65 E-value=4.8 Score=30.84 Aligned_cols=87 Identities=10% Similarity=0.116 Sum_probs=59.2
Q ss_pred CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEE
Q psy6446 41 DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTIT 120 (134)
Q Consensus 41 d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 120 (134)
..+|.|.|+..+..+.+.. -..-+.-.+|..+.++.-. ...+.+||+.+...+.......+|.--+|-.+ +.++
T Consensus 47 ~~~vvIidl~~~~~~~rrp----i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP----ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 120 (1630)
T ss_pred CceEEEEECCCCCCccccc----ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCC-CeeE
Confidence 3478899998765442211 1122334567776665543 67899999999888888877778877888644 4555
Q ss_pred EecCCeEEEEeCC
Q psy6446 121 VTHGSCVTFLDAN 133 (134)
Q Consensus 121 ~~~~~~i~i~d~~ 133 (134)
.-.+..|..|++.
T Consensus 121 lVT~~aVyHW~~~ 133 (1630)
T 1xi4_A 121 LVTDNAVYHWSME 133 (1630)
T ss_pred EEcCCeEEEeccC
Confidence 5557889999874
No 349
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.54 E-value=2.8 Score=25.45 Aligned_cols=101 Identities=11% Similarity=0.084 Sum_probs=48.8
Q ss_pred CCcEEEEecCC-------CeEEEEECCCCCCCCeEEeCCCCCE-eEEEEeeCCCEEEEeeC------CCcEEEEecCCCc
Q psy6446 31 DSYRLATGSND-------KNIRIYDLNKPDAEPTVYRGHSSGI-KHVQFFKNNTRLISCAE------DKTVRLWDVSASA 96 (134)
Q Consensus 31 ~~~~l~~~~~d-------~~v~i~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~ 96 (134)
++..++.|+.+ ..+.+||..+..- ........+. .......+++.++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKW--SEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEE--EEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCE--eECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56677777643 2477888776321 1111111111 11112236666666653 2358899988765
Q ss_pred eeEEEecC--CCCeEEEEccCCcEEEEe-cC-----CeEEEEeCCC
Q psy6446 97 EVQKLEFG--AVPNSLEISRDGTTITVT-HG-----SCVTFLDANS 134 (134)
Q Consensus 97 ~~~~~~~~--~~v~~~~~~~~~~~l~~~-~~-----~~i~i~d~~t 134 (134)
-...-... ..-.++... +++.++.| .+ ..+.+||+++
T Consensus 187 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred EEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCC
Confidence 43322211 111233332 45555544 21 4677888753
No 350
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=87.44 E-value=3.8 Score=27.85 Aligned_cols=56 Identities=9% Similarity=0.099 Sum_probs=35.7
Q ss_pred EEEccCCcEEEEecC------------CCeEEEEECCCCCCCCeEEeCC-CCCEeEEEEeeCCCEEEEee
Q psy6446 26 VHFATDSYRLATGSN------------DKNIRIYDLNKPDAEPTVYRGH-SSGIKHVQFFKNNTRLISCA 82 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~------------d~~v~i~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 82 (134)
+.|+++|.+.+.... ...+..++..+++ +...+.+. ...++.++|+||++.|+..-
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe-l~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCe-EEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 888998887773322 1245556655543 33344432 35789999999999887543
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=85.52 E-value=4.7 Score=24.88 Aligned_cols=39 Identities=5% Similarity=0.040 Sum_probs=18.9
Q ss_pred eeEeecCCCceeeEEe-e-CCCceeeEEEccCCcEEEEecCC
Q psy6446 2 GTVWDAVSGEELHSFQ-H-PHIVKSSVHFATDSYRLATGSND 41 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~d 41 (134)
+.+||..+.+-...-. . ....-.++. ..+++.++.|+.+
T Consensus 88 v~~yd~~~~~W~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 88 VHKYNPKTNSWVKLMSHAPMGMAGHVTF-VHNGKAYVTGGVN 128 (357)
T ss_dssp EEEEETTTTEEEECSCCCSSCCSSEEEE-EETTEEEEEECCC
T ss_pred EEEEeCCCCcEEECCCCCCcccccceEE-EECCEEEEEeCcC
Confidence 5677877655332111 1 111112122 2567777888754
No 352
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=85.08 E-value=4.8 Score=24.65 Aligned_cols=97 Identities=7% Similarity=-0.010 Sum_probs=54.0
Q ss_pred EEEccCCcEEEEecCC--------------CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee----CCCcE
Q psy6446 26 VHFATDSYRLATGSND--------------KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA----EDKTV 87 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d--------------~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i 87 (134)
--+++++..|+..... ..|+..++.... ...+... ....+++++++|+-.. .+..|
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~--~~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG--STVLDPD----PCIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC--CEEEECS----CEEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc--ceEeecC----CccEEEEeCCEEEEEeecCCCCceE
Confidence 4567888888766542 357777776643 2233222 1236788888887655 23456
Q ss_pred EEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--CCeEEEEeC
Q psy6446 88 RLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--GSCVTFLDA 132 (134)
Q Consensus 88 ~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~ 132 (134)
...++.... ...+..... ..++|+++.|.-.. ...|...++
T Consensus 132 y~~~~dGs~-~~~lt~~~~---~~~~~~g~~iy~t~~g~~~Iy~~~l 174 (302)
T 3s25_A 132 YRIRIDGEE-KKKIKNHYL---FTCNTSDRYFYYNNPKNGQLYRYDT 174 (302)
T ss_dssp EEEETTSCC-CEEEESSCC---CCSEEETTEEEEECTTTCCEEEEET
T ss_pred EEEECCCCC-eEEEeCCCc---eEeeEECCEEEEEeCCCceEEEEEC
Confidence 666665433 333332221 34567777766443 356665554
No 353
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=82.78 E-value=9.8 Score=26.41 Aligned_cols=105 Identities=10% Similarity=-0.019 Sum_probs=58.1
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe--C----CCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR--G----HSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA 96 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~--~----~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 96 (134)
+.++...+++...+ ++.+ -+..++..+... ..+. . ....|.++...+++..|..+.. +-+..+|..+++
T Consensus 148 i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~--~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 148 IYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKF--EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp EEEEEECTTCCEEE-EETT-EEEEEETTTTEE--EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred EEEEEEcCCCCEEE-EeCC-CHhhCccCCCce--EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 34466666666544 4444 466777655321 1111 0 1123777776666665555553 457888877654
Q ss_pred eeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 97 EVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 97 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
...... ....|.++...++|.+.+.+. +-+.++|.+
T Consensus 223 ~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~ 259 (758)
T 3ott_A 223 IKQTEAFHNNSIKSLALDGNGDLLAGTD-NGLYVYHND 259 (758)
T ss_dssp EEEEEEEEEEEEEEEEECTTCCEEEEET-TEEEEECCT
T ss_pred EEeccCCCCCeEEEEEEcCCCCEEEEeC-CceeEEecC
Confidence 322111 234577888888888777663 457777653
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.36 E-value=2.9 Score=30.12 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=25.1
Q ss_pred eEEEccCCcEEEEecCCCeEEEEECCCCCC
Q psy6446 25 SVHFATDSYRLATGSNDKNIRIYDLNKPDA 54 (134)
Q Consensus 25 ~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~ 54 (134)
++...++..++++-+.|+.+|+|++.++..
T Consensus 240 ~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 240 SMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp EEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred EEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 366677888999999999999999988653
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.85 E-value=2.9 Score=30.72 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=24.5
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCC
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDA 54 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~ 54 (134)
+...++..++++-+.|+.+++|++.++.+
T Consensus 243 ~~~~~~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 243 MIFLSTYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CEEETTTTEEEEEBTTCEEEEEETTTTEE
T ss_pred eeccCCccEEEEEeCCCEEEEEECCCCCe
Confidence 56667788999999999999999988643
No 356
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=75.06 E-value=14 Score=23.73 Aligned_cols=130 Identities=14% Similarity=0.112 Sum_probs=73.9
Q ss_pred eeEeecCCC--ceeeEEeeC------CCceeeEEEc---cC----CcEEEEe-cCCCeEEEEECCCCCCCCeEE------
Q psy6446 2 GTVWDAVSG--EELHSFQHP------HIVKSSVHFA---TD----SYRLATG-SNDKNIRIYDLNKPDAEPTVY------ 59 (134)
Q Consensus 2 i~v~d~~~~--~~~~~~~~~------~~~~~~~~~~---~~----~~~l~~~-~~d~~v~i~~~~~~~~~~~~~------ 59 (134)
|.+||+.+. +.++.+.-+ ...+..+++. |. +.++..+ +..+-+.++|+.+++.- +..
T Consensus 125 Lv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw-Rv~~~~~~p 203 (381)
T 3q6k_A 125 IVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW-NVTHPTFKA 203 (381)
T ss_dssp EEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE-EEECGGGSC
T ss_pred EEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE-EEccCCCcc
Confidence 678999999 999888732 2234447776 22 3344333 34678999999875421 111
Q ss_pred ------e--CC----CCCEeEEEEeeC----CCEEEEeeCCCcEEEEecC-----C---CceeEEEecCC---CCeEEEE
Q psy6446 60 ------R--GH----SSGIKHVQFFKN----NTRLISCAEDKTVRLWDVS-----A---SAEVQKLEFGA---VPNSLEI 112 (134)
Q Consensus 60 ------~--~~----~~~v~~~~~~~~----~~~l~~~~~d~~i~~~d~~-----~---~~~~~~~~~~~---~v~~~~~ 112 (134)
. +. ...+..++++|+ ++.|.-....+. ++|.+. + ...+..+.... .-..++.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 0 11 246888899887 677765544432 233222 2 12233333332 2234566
Q ss_pred c-cCCcEEEEe-cCCeEEEEeCC
Q psy6446 113 S-RDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 113 ~-~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+ .+|..+++- ..+.|..|+..
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~ 305 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQ 305 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETT
T ss_pred eCCCCeEEEEeccCCeEEEEeCC
Confidence 5 566655554 56899999875
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=73.98 E-value=7.3 Score=27.33 Aligned_cols=30 Identities=23% Similarity=0.276 Sum_probs=23.7
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEECCCCC
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYDLNKPD 53 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~ 53 (134)
++.++.+ +..++++-+.|..+|+|++.++.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 4553444 47799999999999999999865
No 358
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=71.52 E-value=15 Score=22.60 Aligned_cols=47 Identities=17% Similarity=-0.030 Sum_probs=24.7
Q ss_pred CcEEEEecCCCceeEEEecCC--CC-eEEEEccCCcEEEEec-------CCeEEEEeC
Q psy6446 85 KTVRLWDVSASAEVQKLEFGA--VP-NSLEISRDGTTITVTH-------GSCVTFLDA 132 (134)
Q Consensus 85 ~~i~~~d~~~~~~~~~~~~~~--~v-~~~~~~~~~~~l~~~~-------~~~i~i~d~ 132 (134)
..+.+||..+.+....-.... .- .+++.. ++++++.|+ ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 468899988765444332221 11 233333 455555542 245777765
No 359
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=70.97 E-value=8.7 Score=19.63 Aligned_cols=13 Identities=8% Similarity=0.031 Sum_probs=7.0
Q ss_pred EeeCCCcEEEEec
Q psy6446 80 SCAEDKTVRLWDV 92 (134)
Q Consensus 80 ~~~~d~~i~~~d~ 92 (134)
.-..||.+.++|-
T Consensus 62 ~l~~dGNLVl~d~ 74 (113)
T 3mez_B 62 RLGHSGELDITDD 74 (113)
T ss_dssp EECTTSCEEEECT
T ss_pred EEeCCCcEEEECC
Confidence 3345566666653
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=68.57 E-value=20 Score=22.97 Aligned_cols=70 Identities=11% Similarity=0.117 Sum_probs=44.9
Q ss_pred CEeEEEEeeCCCEEE--EeeC-------------CCcEEEEecCCC--ceeEEEecC-------CCCeEEEEc---cC--
Q psy6446 65 GIKHVQFFKNNTRLI--SCAE-------------DKTVRLWDVSAS--AEVQKLEFG-------AVPNSLEIS---RD-- 115 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~--~~~~-------------d~~i~~~d~~~~--~~~~~~~~~-------~~v~~~~~~---~~-- 115 (134)
.|..+...+.++..+ +|-. ...|.+||+.+. +.++.+..+ +....+.++ |+
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 466777766555443 2211 125889999999 888887742 345677777 22
Q ss_pred --CcEEEEe--cCCeEEEEeCCC
Q psy6446 116 --GTTITVT--HGSCVTFLDANS 134 (134)
Q Consensus 116 --~~~l~~~--~~~~i~i~d~~t 134 (134)
+.++.++ ..+.|.+||+++
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~ 190 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKK 190 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTT
T ss_pred CCccEEEEEcCCCCcEEEEECCC
Confidence 3444454 458999999864
No 361
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=61.82 E-value=14 Score=18.76 Aligned_cols=16 Identities=0% Similarity=0.100 Sum_probs=9.1
Q ss_pred EEEeeCCCcEEEEecC
Q psy6446 78 LISCAEDKTVRLWDVS 93 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~ 93 (134)
.+.-..||.+.++|-.
T Consensus 53 ~l~l~~dGNLVl~~~~ 68 (111)
T 3mez_A 53 TLRLNNRGQLEIHSAN 68 (111)
T ss_dssp EEEECTTSCEEEECSS
T ss_pred EEEEcCCCcEEEEeCC
Confidence 3344556777777643
No 362
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=51.64 E-value=51 Score=22.05 Aligned_cols=57 Identities=9% Similarity=0.027 Sum_probs=35.6
Q ss_pred cEEEEecCCCeEEEEECC-CC------CCCCeEEe--CCCCCEeEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 33 YRLATGSNDKNIRIYDLN-KP------DAEPTVYR--GHSSGIKHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 33 ~~l~~~~~d~~v~i~~~~-~~------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
..++.|..+|.|.-.-+. .. ......+. ....+|..|.++++.++|..++.++.+++
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 357788889977543332 21 11222222 13468899999999999999888775543
No 363
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=49.28 E-value=46 Score=20.78 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=42.7
Q ss_pred CCEeEEEEee-------CCCEEEEeeCCCcEEEEecCCCceeEEEe----cCCCCeEEEEccCCcEEEEec--CCeEEE
Q psy6446 64 SGIKHVQFFK-------NNTRLISCAEDKTVRLWDVSASAEVQKLE----FGAVPNSLEISRDGTTITVTH--GSCVTF 129 (134)
Q Consensus 64 ~~v~~~~~~~-------~~~~l~~~~~d~~i~~~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~--~~~i~i 129 (134)
..+..+.|.. +++++++....+.|...++..++...... ....+..+++.|+|.+++++. +|.|..
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~r 349 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLK 349 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEE
Confidence 3567778763 45666666667778888877654333222 134688999999998777643 465543
No 364
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=44.82 E-value=78 Score=22.17 Aligned_cols=56 Identities=4% Similarity=-0.041 Sum_probs=34.3
Q ss_pred cEEEEecCCCeEEE-EECCCCCCCCeEE--eCCCCCEeEEEEeeCC--CEEEEeeCCCcEE
Q psy6446 33 YRLATGSNDKNIRI-YDLNKPDAEPTVY--RGHSSGIKHVQFFKNN--TRLISCAEDKTVR 88 (134)
Q Consensus 33 ~~l~~~~~d~~v~i-~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~ 88 (134)
..++.|..+|.|.- ............. .....+|..|.++++. ..|+.++..+.++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~ 476 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQ 476 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEE
Confidence 36788899997743 3333221111111 1234678899999887 8888887776544
No 365
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=40.16 E-value=95 Score=21.84 Aligned_cols=57 Identities=9% Similarity=0.053 Sum_probs=34.8
Q ss_pred cEEEEecCCCeEE-EEECCCCCC------CCeEE--eCCCCCEeEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 33 YRLATGSNDKNIR-IYDLNKPDA------EPTVY--RGHSSGIKHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 33 ~~l~~~~~d~~v~-i~~~~~~~~------~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
..++.|..+|.|. +........ ..... .....+|..|.++++.+.|+.++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4577888999875 332222110 11111 124567899999999999998888775543
No 366
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=38.75 E-value=39 Score=16.92 Aligned_cols=15 Identities=20% Similarity=0.240 Sum_probs=9.5
Q ss_pred EEeeCCCcEEEEecC
Q psy6446 79 ISCAEDKTVRLWDVS 93 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~ 93 (134)
+.-..||.+.++|-.
T Consensus 55 L~l~~dGnLvL~d~~ 69 (105)
T 4h3o_A 55 AVLQSDGNFVVYDSS 69 (105)
T ss_dssp EEECTTSCEEEECTT
T ss_pred EEEeCCccEEEECCC
Confidence 444567777777643
No 367
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=38.43 E-value=97 Score=21.44 Aligned_cols=57 Identities=7% Similarity=-0.001 Sum_probs=35.0
Q ss_pred cEEEEecCCCeEEEEECCCCC-C--CC--eEEe--CCCCCEeEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 33 YRLATGSNDKNIRIYDLNKPD-A--EP--TVYR--GHSSGIKHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 33 ~~l~~~~~d~~v~i~~~~~~~-~--~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
..++.|+.+|.|.-.-..... . .. ..+. ....+|..|.++++...|+.++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 467788889987643332211 0 11 1111 23567899999998888888777665443
No 368
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=36.94 E-value=43 Score=16.88 Aligned_cols=42 Identities=7% Similarity=0.138 Sum_probs=20.6
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEec--CCCCeEEEEccCCcEEE
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTTIT 120 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~ 120 (134)
.+.-..||.+.++|- .++.+..-.. ......+.+.++|.+++
T Consensus 54 ~l~l~~dGNLVl~~~-~~~~~W~S~t~~~~g~~~l~l~~dGnlvl 97 (110)
T 3a0c_A 54 RLTLHNNGNLVIYDQ-SNRVIWQTKTNGKEDHYVLVLQQDRNVVI 97 (110)
T ss_dssp EEEECTTSCEEEECT-TCCEEEECCCCCSSSCCEEEECTTSCEEE
T ss_pred EEEEeCCCCEEEECC-CCcEEEecCCCCCCCCEEEEEeCCccEEE
Confidence 344456777777764 3333332211 11223566666666444
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=36.30 E-value=76 Score=19.58 Aligned_cols=101 Identities=10% Similarity=0.095 Sum_probs=58.6
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCC------CeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCC----c---e
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAE------PTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSAS----A---E 97 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~----~---~ 97 (134)
+...++..+.+|.++...+..-... ...+.. ...+-.+....++..++..+.+|.+..++...- + -
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~G 191 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQG 191 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCC
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCC
Confidence 3566788888999888776432110 111222 456666666555677888899999888876431 1 1
Q ss_pred eEE--EecCCCCeEEEEccCCc-EEEEecCCeEEEEeC
Q psy6446 98 VQK--LEFGAVPNSLEISRDGT-TITVTHGSCVTFLDA 132 (134)
Q Consensus 98 ~~~--~~~~~~v~~~~~~~~~~-~l~~~~~~~i~i~d~ 132 (134)
... +..+..+..+...+++. .++.+..|.....++
T Consensus 192 v~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~ 229 (312)
T 1suu_A 192 VCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNM 229 (312)
T ss_dssp EECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred eEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence 122 22344555555444444 455567777766654
No 370
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=34.88 E-value=83 Score=19.64 Aligned_cols=113 Identities=12% Similarity=0.144 Sum_probs=64.9
Q ss_pred eCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCCCC------eEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 18 HPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDAEP------TVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 18 ~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
..+.++..+.... +...++..+.+|.++--.+..-.... ..++. ...+..+........++..+..|.+..
T Consensus 93 ~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 93 PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIR 171 (327)
T ss_dssp TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEE
T ss_pred CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEE
Confidence 3445555455543 56789999999999988765422111 11222 345555555556677888888898777
Q ss_pred EecC--CCc---------eeEEEecCCCCeEEEEccCC-cEEEEecCCeEEEEe
Q psy6446 90 WDVS--ASA---------EVQKLEFGAVPNSLEISRDG-TTITVTHGSCVTFLD 131 (134)
Q Consensus 90 ~d~~--~~~---------~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~i~i~d 131 (134)
+... .-. ....+..+..|.++...+++ .+++++..|.++.-.
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~ 225 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTA 225 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEE
T ss_pred EECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEE
Confidence 7655 211 11122234556666555444 445556777766544
No 371
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=33.22 E-value=1.1e+02 Score=20.73 Aligned_cols=67 Identities=9% Similarity=0.094 Sum_probs=41.0
Q ss_pred eeeEEEcc--CCcEEEEecCCCeEEEEECC-CC-CCCCeEEe-CCCCCE-eEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 23 KSSVHFAT--DSYRLATGSNDKNIRIYDLN-KP-DAEPTVYR-GHSSGI-KHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 23 ~~~~~~~~--~~~~l~~~~~d~~v~i~~~~-~~-~~~~~~~~-~~~~~v-~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
.++++... ....++.|..+|.|.-.-+. .. ......+. ....+| ..|.++++...|+.++..+.+++
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 44466554 23456788899988654443 21 12222222 334567 48999998889988888776554
No 372
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=33.02 E-value=53 Score=16.86 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=19.9
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEec-C-CCCeEEEEccCCcEEE
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLEF-G-AVPNSLEISRDGTTIT 120 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~~-~-~~v~~~~~~~~~~~l~ 120 (134)
.+.-..||.+.++|- .++.+..-.. . .....+.+.++|.+++
T Consensus 64 ~l~l~~dGNLVl~d~-~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl 107 (119)
T 1b2p_A 64 RAVLQPDGVLVVITN-ENVTVWQSPVAGKAGHYVLVLQPDRNVVI 107 (119)
T ss_dssp EEEECTTSCEEEECT-TCCEEEECSCCCCSSCEEEEECTTSCEEE
T ss_pred EEEEccCCEEEEEeC-CCcEEEcCCCCCCCCCEEEEEECCCcEEE
Confidence 444456777777763 3333332211 1 1123455556665443
No 373
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=30.09 E-value=1e+02 Score=19.19 Aligned_cols=113 Identities=11% Similarity=0.083 Sum_probs=61.3
Q ss_pred CCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCCCC-------eEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 19 PHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDAEP-------TVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 19 ~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
.+.++..+.... ++..++..+.+|.++--.+..-.... ..+.. ...+-.+......+.++..+.+|.+..
T Consensus 91 ~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~ir 169 (323)
T 1wp5_A 91 DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALW 169 (323)
T ss_dssp TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEE
T ss_pred CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 344555344443 25678888999999987764321111 01222 245555555556667888889998888
Q ss_pred EecCCCc-------eeEE--EecCCCCeEEEEccCCc--EEEEecCCeEEEEeC
Q psy6446 90 WDVSASA-------EVQK--LEFGAVPNSLEISRDGT--TITVTHGSCVTFLDA 132 (134)
Q Consensus 90 ~d~~~~~-------~~~~--~~~~~~v~~~~~~~~~~--~l~~~~~~~i~i~d~ 132 (134)
++...-. -... +..+..+.++...+++. .++.+..|..+..++
T Consensus 170 f~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~ 223 (323)
T 1wp5_A 170 FDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKL 223 (323)
T ss_dssp EEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred EEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEH
Confidence 8764311 1121 22334555554433333 555566666555443
No 374
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=29.61 E-value=50 Score=17.22 Aligned_cols=17 Identities=12% Similarity=0.134 Sum_probs=13.7
Q ss_pred eeEeecCCCceeeEEee
Q psy6446 2 GTVWDAVSGEELHSFQH 18 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~ 18 (134)
|+|.|..|++.++.+..
T Consensus 71 VkVvD~~TgEVIRqIPp 87 (117)
T 2hc5_A 71 VKVIEDSTNEVIREIPP 87 (117)
T ss_dssp EEEEETTTTEEEEEECH
T ss_pred EEEEECCCCcEEEeCCh
Confidence 67888889998888753
No 375
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=28.85 E-value=61 Score=16.23 Aligned_cols=15 Identities=13% Similarity=0.239 Sum_probs=9.0
Q ss_pred EEEeeCCCcEEEEec
Q psy6446 78 LISCAEDKTVRLWDV 92 (134)
Q Consensus 78 l~~~~~d~~i~~~d~ 92 (134)
.+.-..||.+.++|-
T Consensus 53 ~l~l~~dGNLvl~~~ 67 (109)
T 3dzw_A 53 HLSMQSDGNLVVYSP 67 (109)
T ss_dssp EEEECTTSCEEEECT
T ss_pred EEEEeCCCCEEEECC
Confidence 344456677777763
No 376
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=26.83 E-value=1.1e+02 Score=18.34 Aligned_cols=69 Identities=7% Similarity=0.099 Sum_probs=41.5
Q ss_pred CCEeEEEEeeCCCEEEEeeCCCcEEEEecCC-------CceeEEEecCCCCeEEEEc--cCCcEEEEecCCeEEEEeC
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDKTVRLWDVSA-------SAEVQKLEFGAVPNSLEIS--RDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-------~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~i~i~d~ 132 (134)
..|..+....++.+++.++.+|.++...+.. +.....+.....+..+... .+...++.+.+|.+..++.
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 4566664334567788899999998887643 2222223333445444444 3445666678888777765
No 377
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=26.68 E-value=69 Score=16.13 Aligned_cols=16 Identities=19% Similarity=0.378 Sum_probs=13.5
Q ss_pred eeEeecCCCceeeEEe
Q psy6446 2 GTVWDAVSGEELHSFQ 17 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~ 17 (134)
|.|||..+|....++-
T Consensus 19 V~IvNvnNG~RfeTYv 34 (97)
T 1uhe_A 19 VEIVDVNNGERFSTYV 34 (97)
T ss_dssp EEEEETTTCCEEEEEC
T ss_pred EEEEECCCCceEEEEE
Confidence 6799999999888775
No 378
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=25.50 E-value=1.7e+02 Score=20.21 Aligned_cols=68 Identities=9% Similarity=-0.032 Sum_probs=40.3
Q ss_pred eeeEEEcc----C--CcEEEEecCCCeEE-EEECCCC---CCCCeE---EeC-----------CCCCEeEEEEeeCCCEE
Q psy6446 23 KSSVHFAT----D--SYRLATGSNDKNIR-IYDLNKP---DAEPTV---YRG-----------HSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 23 ~~~~~~~~----~--~~~l~~~~~d~~v~-i~~~~~~---~~~~~~---~~~-----------~~~~v~~~~~~~~~~~l 78 (134)
++.+++.. + -..++.|+.+|.|. +...... ...... +.. ...+|..|.++++...|
T Consensus 405 lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~L 484 (565)
T 3oky_B 405 LTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSL 484 (565)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEE
T ss_pred eEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEE
Confidence 34466654 1 35678899999875 4332211 010111 111 14578899999999999
Q ss_pred EEeeCCCcEEEE
Q psy6446 79 ISCAEDKTVRLW 90 (134)
Q Consensus 79 ~~~~~d~~i~~~ 90 (134)
+.++..+.+++-
T Consensus 485 YV~s~~~V~qVP 496 (565)
T 3oky_B 485 YVAFSTCVIKVP 496 (565)
T ss_dssp EEECSSCEEEEE
T ss_pred EEEecCeEEEee
Confidence 988888766554
No 379
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=25.27 E-value=74 Score=16.00 Aligned_cols=16 Identities=19% Similarity=0.538 Sum_probs=13.3
Q ss_pred eeEeecCCCceeeEEe
Q psy6446 2 GTVWDAVSGEELHSFQ 17 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~ 17 (134)
|.|||..+|+...++-
T Consensus 20 V~IvNvnNG~Rf~TYv 35 (96)
T 1vc3_B 20 VDIYDITNGARLTTYA 35 (96)
T ss_dssp EEEEETTTCCEEEEEC
T ss_pred EEEEECCCCceEEEEE
Confidence 6789999999887775
No 380
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=24.57 E-value=1.2e+02 Score=18.29 Aligned_cols=111 Identities=7% Similarity=0.072 Sum_probs=59.3
Q ss_pred CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC--------eEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEe
Q psy6446 20 HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP--------TVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWD 91 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 91 (134)
..++. +........++..+..|.+..+....-.... ..+. ....|..+...+++..++..+..|.++..+
T Consensus 116 D~l~~-~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~ 193 (276)
T 3no0_A 116 DEVVS-IASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKIS 193 (276)
T ss_dssp CCEEE-EEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEE
T ss_pred CEEEE-EEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeE
Confidence 34444 3333345567777788888777654311100 0111 234566666556677888889999888877
Q ss_pred cCC-------CceeEEEecCCCCeEEE-EccCCcEEEEecCCeEEE--EeC
Q psy6446 92 VSA-------SAEVQKLEFGAVPNSLE-ISRDGTTITVTHGSCVTF--LDA 132 (134)
Q Consensus 92 ~~~-------~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~~~i~i--~d~ 132 (134)
+.. ++-...+.....+..+. ..++...++.+.+|.+.. ++.
T Consensus 194 ~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 194 HEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp GGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEG
T ss_pred HHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCH
Confidence 642 12222222233333333 233335556667776665 543
No 381
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=24.38 E-value=1.9e+02 Score=20.48 Aligned_cols=66 Identities=17% Similarity=0.191 Sum_probs=39.1
Q ss_pred eeEEEcc--CCcEEEEecCCCeEEEEECCCCCC---CCeEEe--CCCCCE-eEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 24 SSVHFAT--DSYRLATGSNDKNIRIYDLNKPDA---EPTVYR--GHSSGI-KHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 24 ~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~---~~~~~~--~~~~~v-~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
++++... +...++.|..+|.|.-.-+..... ....+. ....+| ..|.++++...|+.++..+.+++
T Consensus 402 T~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 402 TSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp CCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 3355544 345678899999887544443211 111111 134555 68999988888888777665443
No 382
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=24.16 E-value=81 Score=16.06 Aligned_cols=16 Identities=13% Similarity=0.304 Sum_probs=13.2
Q ss_pred eeEeecCCCceeeEEe
Q psy6446 2 GTVWDAVSGEELHSFQ 17 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~ 17 (134)
|.|||..+|....++-
T Consensus 20 V~I~NvnNG~Rf~TYv 35 (102)
T 3plx_B 20 VQVVNVNNGARFETYT 35 (102)
T ss_dssp EEEEETTTCCEEEEEC
T ss_pred EEEEECCCCcEEEEEE
Confidence 6789999999887775
No 383
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=24.16 E-value=16 Score=24.03 Aligned_cols=18 Identities=33% Similarity=0.650 Sum_probs=11.8
Q ss_pred EeeCCCcEEEEecCCCce
Q psy6446 80 SCAEDKTVRLWDVSASAE 97 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~ 97 (134)
.+..+|.|++||+++...
T Consensus 162 ~~~~~GVVrvWDVkd~sl 179 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAEL 179 (577)
T ss_dssp ----CCEECSEECSCGGG
T ss_pred CCCCCCeEEEEecCCHHH
Confidence 456789999999987654
No 384
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=22.03 E-value=1.6e+02 Score=18.54 Aligned_cols=53 Identities=9% Similarity=-0.019 Sum_probs=26.6
Q ss_pred CcEEEEecCCCeEEEEECCCCCCCCeEE--eCCCCCEeEEEEee-CCCEEEEeeCCC
Q psy6446 32 SYRLATGSNDKNIRIYDLNKPDAEPTVY--RGHSSGIKHVQFFK-NNTRLISCAEDK 85 (134)
Q Consensus 32 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~ 85 (134)
...|.+|...| +.+++........... ......+.++.+.| +...+..+...+
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 34677777766 4444433211111111 12345689999988 344455555444
No 385
>3ge2_A Lipoprotein, putative; beta-barrel, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.20A {Streptococcus pneumoniae}
Probab=20.57 E-value=1.1e+02 Score=16.21 Aligned_cols=22 Identities=0% Similarity=0.015 Sum_probs=16.0
Q ss_pred CCCeEEEEccCCcEEEEecCCe
Q psy6446 105 AVPNSLEISRDGTTITVTHGSC 126 (134)
Q Consensus 105 ~~v~~~~~~~~~~~l~~~~~~~ 126 (134)
..+..+.|.|....|.+|.|-.
T Consensus 83 qEikqV~iD~~NQ~m~IGDDvk 104 (130)
T 3ge2_A 83 QKVKQVTFDSANQRMIIGDDVK 104 (130)
T ss_dssp EEEEEEEEETTTTEEEETTEEE
T ss_pred eeeEEEEEccCcCEEEecCcce
Confidence 3567788889888888875533
No 386
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.19 E-value=1.5e+02 Score=20.93 Aligned_cols=24 Identities=21% Similarity=0.275 Sum_probs=19.3
Q ss_pred eeeEEEccCCcEEEEecCCCeEEE
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRI 46 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i 46 (134)
+..+.++++...|++++.++.+++
T Consensus 472 I~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 472 ISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp CCEEEEETTTTEEEEEBSSCEEEE
T ss_pred eeeEEEcCCCCEEEEEECCEEEEE
Confidence 334889999999999998887765
Done!