RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6450
(139 letters)
>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 77.2 bits (190), Expect = 2e-20
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 25 LFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYVIKVQPGERP 84
+ +NFK + DEL + G + V + WW+G GR G+FPSNYV +++ ER
Sbjct: 12 IVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSSERS 71
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 78.5 bits (193), Expect = 2e-20
Identities = 18/62 (29%), Positives = 25/62 (40%)
Query: 25 LFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYVIKVQPGERP 84
+V + + + DE+ L G V VI WW + GYFPS Y+ K
Sbjct: 16 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQ 75
Query: 85 LQ 86
Q
Sbjct: 76 AQ 77
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 74.7 bits (184), Expect = 9e-20
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYVIKV 78
L++F + EL + G + V+D SD NWWKG C G+ G FP NYV V
Sbjct: 5 QALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPV 56
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 75.7 bits (186), Expect = 1e-19
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 22 PTNLFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYVIKVQPG 81
P + +Y++ + + DEL G + V++ D +WW+G+ G G FPSNYV
Sbjct: 33 PVCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKMTTDS 92
Query: 82 ERP 84
P
Sbjct: 93 SGP 95
Score = 40.7 bits (95), Expect = 4e-06
Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 10/84 (11%)
Query: 65 GRVGYFPSNYVIKVQPGERPLQVTHNLQ---------IADGESGLSLLRDQIVIQIGDEV 115
G+ G+FP+++V + P + A+ E LS + Q++ + +
Sbjct: 7 GQKGWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSKGQLINVMNKDD 66
Query: 116 DGMVMIRNGENRQGVCPLKYLQEV 139
G+ P Y++
Sbjct: 67 PDWWQGEIN-GVTGLFPSNYVKMT 89
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 73.6 bits (181), Expect = 3e-19
Identities = 16/54 (29%), Positives = 36/54 (66%)
Query: 25 LFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYVIKV 78
L + LY+++ + E+ +K G +T++++++++WWK + R G+ P+ YV K+
Sbjct: 2 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKL 55
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId:
9606]}
Length = 62
Score = 73.2 bits (180), Expect = 4e-19
Identities = 12/50 (24%), Positives = 29/50 (58%)
Query: 26 FVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYV 75
L+++++ ++L+ + G + V+ ++ W +G+ G+VG FP +V
Sbjct: 8 VEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFV 57
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 73.2 bits (180), Expect = 4e-19
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 23 TNLFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYV 75
T L++F + + EL K G +T+I+ D NWW+G+ R G FPSNYV
Sbjct: 2 TKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYV 54
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 73.7 bits (181), Expect = 4e-19
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 26 FVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYVIKVQPG 81
++ LY + S +L G ++ V WW G R G FPSNYV G
Sbjct: 11 YIALYPYSSVEPGDLTFTEGEEILVTQKDG-EWWTGSIGDRSGIFPSNYVKPKDSG 65
>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 73.4 bits (180), Expect = 6e-19
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 22 PTNLFVVLYNFKSRHADELDLKPGYKVTVIDTSDQ----NWWKGKCMGRVGYFPSNYVIK 77
++ +Y FK+R+ +EL + K+ +++ D WW + G+ GY PSNY+ K
Sbjct: 12 GNQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRK 71
Query: 78 VQPG 81
+ G
Sbjct: 72 TESG 75
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 72.4 bits (178), Expect = 8e-19
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 25 LFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCM--GRVGYFPSNYVIKV 78
LFV LY++++ D+L G K ++++S+ +WW+ + + G GY PSNYV V
Sbjct: 2 LFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV 57
Score = 27.8 bits (62), Expect = 0.11
Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGEN-RQGVCPLKYLQEV 139
A E LS + + + R+ G P Y+ V
Sbjct: 11 AITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV 57
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 72.5 bits (178), Expect = 9e-19
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 23 TNLFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCM-GRVGYFPSNYVIKVQPG 81
+ + V +Y+F++ A +L L+ G + +++ +D +WW+ + G GY PSNYV +
Sbjct: 2 SEIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSN 61
Query: 82 E 82
Sbjct: 62 N 62
Score = 30.9 bits (70), Expect = 0.008
Identities = 10/46 (21%), Positives = 14/46 (30%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQEV 139
A L L R Q I + R+ +G P Y+
Sbjct: 13 ATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGK 58
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 72.5 bits (178), Expect = 1e-18
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCM-GRVGYFPSNYVIKVQP 80
V LY++ +A++L L+ G + +++ S+ WW+ + G+ GY PSNYV + +
Sbjct: 12 VALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAED 66
Score = 32.1 bits (73), Expect = 0.004
Identities = 7/46 (15%), Positives = 15/46 (32%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQEV 139
+ L L + + + R+ ++G P Y+ E
Sbjct: 19 PMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEA 64
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 72.1 bits (177), Expect = 1e-18
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 26 FVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGK--CMGRVGYFPSNYVIKVQPGE 82
FV LY+++SR +L K G ++ +++ ++ +WW G+ GY PSNYV +
Sbjct: 5 FVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQ 63
Score = 28.2 bits (63), Expect = 0.074
Identities = 6/47 (12%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGEN-RQGVCPLKYLQEV 139
+ E+ LS + + + + + + + + G P Y+
Sbjct: 13 SRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS 59
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 71.3 bits (175), Expect = 2e-18
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYVIKV 78
LY+F++ DEL + G V V+D+S+ +WW G+ ++G FP+NYV +
Sbjct: 5 RALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM 56
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 58
Score = 71.2 bits (175), Expect = 2e-18
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYV 75
LY+F++ +EL K G +TV+D SD NWW+G+ G FPSN+V
Sbjct: 6 RALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFV 54
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 69.8 bits (171), Expect = 8e-18
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 24 NLFVVLYNFKSRHADELDLKPGYKVTVIDTSDQ-NWWKGKCMGRVGYFPSNYVIKV 78
NLFV LY+F + + L + G K+ V+ + W + + G+ PSNY+ V
Sbjct: 1 NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPV 56
Score = 26.3 bits (58), Expect = 0.35
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQEV 139
A G++ LS+ + + + +G +G +N QG P Y+ V
Sbjct: 11 ASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPV 56
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 70.2 bits (172), Expect = 1e-17
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYVIKVQPGE 82
L ++ ++ + L+ +TV++ + NWW G+ G G+FP +YV + E
Sbjct: 14 QALCSWTAKKDNHLNFSKHDIITVLEQQE-NWWFGEVHGGRGWFPKSYVKIIPGSE 68
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 69.5 bits (170), Expect = 2e-17
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 21 LPTNLFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWW-KGKCMGRVGYFPSNYVIK 77
L NL + L++++ H +L + G ++ +++ S + W + G+ G+ P N+V K
Sbjct: 4 LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAK 61
Score = 27.5 bits (61), Expect = 0.14
Identities = 3/45 (6%), Positives = 14/45 (31%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQE 138
+ L + + + + + ++G P ++ +
Sbjct: 17 PSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAK 61
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 70.1 bits (171), Expect = 2e-17
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 26 FVVLYNFKSRHADELDLKPGYKVTVI--DTSDQNWWKGKCMGRVGYFPSNYVIKVQPGER 83
+ LY F++R+ DE+ G + V + W G G G+FP NYV K+ E
Sbjct: 8 YRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSSEN 67
Query: 84 PLQVT 88
V+
Sbjct: 68 EKAVS 72
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 69.4 bits (170), Expect = 2e-17
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRV-GYFPSNYVIKVQPGER 83
L+++K++ DEL + ++ + WW+G G+ +FPSNYV ++ E
Sbjct: 10 KALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNPEG 67
Score = 29.0 bits (65), Expect = 0.048
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQEV 139
A E L+ ++ I+ + + G G +Q P Y++E+
Sbjct: 17 AQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEM 62
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 60
Score = 69.0 bits (169), Expect = 2e-17
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 25 LFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCM--GRVGYFPSNYV 75
+F +Y++ + ADE+ K G + + D+ W G GR G P+NYV
Sbjct: 5 IFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYV 57
>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 68.6 bits (168), Expect = 2e-17
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVID-TSDQNWWKGKCMGRVGYFPSNYV 75
+ Y+FK+ DEL K G + V++ DQNW+K + G+ G+ P NY+
Sbjct: 4 IAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
Score = 26.2 bits (58), Expect = 0.39
Identities = 10/44 (22%), Positives = 17/44 (38%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQ 137
A + LS R I+ + +E D + G P Y++
Sbjct: 11 ATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIE 54
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 68.4 bits (167), Expect = 3e-17
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 26 FVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYV 75
+V + + + DE+ L G V VI WW + GYFPS Y+
Sbjct: 3 YVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYL 52
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 68.0 bits (166), Expect = 8e-17
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGR-----VGYFPSNYVIKVQPG 81
V + + +++L L PG + ++ + WW+G+ R G+FP+++V + P
Sbjct: 11 QVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPS 70
Query: 82 ERP 84
Sbjct: 71 SER 73
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 67.5 bits (165), Expect = 8e-17
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCM--GRVGYFPSNYV 75
Y++ + +EL K+ I+ D +WW G+ G G FPSNYV
Sbjct: 4 TAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYV 54
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 67.0 bits (164), Expect = 9e-17
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 28 VLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGK-CMGRVGYFPSNYV 75
L++F ++L K G + + D ++ WW + G+ G P YV
Sbjct: 6 ALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYV 54
Score = 31.2 bits (71), Expect = 0.006
Identities = 7/45 (15%), Positives = 19/45 (42%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQE 138
+ E L + I+ + + E ++G+ P+ Y+++
Sbjct: 12 GNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human
(Homo sapiens) [TaxId: 9606]}
Length = 65
Score = 66.8 bits (163), Expect = 1e-16
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 25 LFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWW-KGKCMGRVGYFPSNYVIKVQPGE 82
+ V LY++++ H ++L + G ++ V++ S + W + + GY PSNYV +V E
Sbjct: 6 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLE 64
Score = 27.5 bits (61), Expect = 0.14
Identities = 7/46 (15%), Positives = 16/46 (34%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQEV 139
A LS + ++ + + + ++G P Y+ V
Sbjct: 15 AIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARV 60
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus
musculus [TaxId: 10090]}
Length = 53
Score = 66.5 bits (162), Expect = 1e-16
Identities = 15/52 (28%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGK-CMGRVGYFPSNYVIK 77
+ LY++++ EL L+ + ++D+S+ +WW+ + G GY PS+Y+++
Sbjct: 2 IALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE 53
Score = 30.2 bits (68), Expect = 0.011
Identities = 8/45 (17%), Positives = 16/45 (35%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQE 138
+ L+L D+ + +++ +G P YL E
Sbjct: 9 TNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE 53
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 65.9 bits (161), Expect = 3e-16
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQN--WWKGKCMGRVGYFPSNYV 75
V LY+F + +L + G +T++ SD WW G+ GR G FP+NYV
Sbjct: 5 VALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYV 55
Score = 25.1 bits (55), Expect = 0.91
Identities = 6/47 (12%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 94 ADGESGLSLLRDQIVIQIG-DEVDGMVMIRNGENRQGVCPLKYLQEV 139
+ L + ++ + + R+G+ P Y++ V
Sbjct: 12 GEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV 58
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 65.3 bits (159), Expect = 5e-16
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 26 FVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYV 75
+ + +++ E+ L G V V++ S+ WW + + G+ P++++
Sbjct: 5 YRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFL 54
>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 64.9 bits (158), Expect = 1e-15
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 22 PTNLFVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWW-KGKCMGRVGYFPSNYV 75
P LY K+ H EL G + S + W +G G+ G P NYV
Sbjct: 9 PFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYV 63
Score = 28.3 bits (63), Expect = 0.088
Identities = 7/46 (15%), Positives = 18/46 (39%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVDGMVMIRNGENRQGVCPLKYLQEV 139
A+ +S LS + + + + + G+ P Y++ +
Sbjct: 21 AEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL 66
>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 63
Score = 64.0 bits (156), Expect = 2e-15
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQN---WWKGKCMGRVGYFPSNYV 75
L++++ ++ DEL +K G +T+I D++ WW + + GY P N +
Sbjct: 8 YALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLL 59
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 59
Score = 63.8 bits (155), Expect = 2e-15
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNYVIKVQP 80
Y+F +R++ EL + + ++D Q W G G+ P+N + ++
Sbjct: 5 KSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRT 58
>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 64.1 bits (155), Expect = 3e-15
Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 22 PTNLFVVLYNFKSRHADELDLKPGYKVTVIDTSD----QNWWKGKCMGRVGYFPSNYVIK 77
P LF NF + ++ L G V VI D QN W G+ S+++
Sbjct: 16 PEKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKP 75
Query: 78 VQPGERPLQVT 88
P +
Sbjct: 76 YNPRRSHSDAS 86
>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 71
Score = 63.3 bits (154), Expect = 4e-15
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVID-TSDQNWWKGKCM-GRVGYFPSNYVIKVQ 79
+ YNF +L G +T++ T D NW+K K GR G P+NYV K +
Sbjct: 10 IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 64
Score = 30.2 bits (68), Expect = 0.017
Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 94 ADGESGLSLLRDQIVIQIGDEVD-GMVMIRNGENRQGVCPLKYLQEV 139
E L + ++ + D +N R+G+ P Y+Q+
Sbjct: 17 GTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKR 63
>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 71
Score = 62.2 bits (151), Expect = 1e-14
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 27 VVLYNFKSRHADELDLKPGYKVTVIDTSDQ--NWWKGKCM-GRVGYFPSNYVIKVQPG 81
LY F S +EL+ + G + VI+ + WWK K G+VG P NYV+ + G
Sbjct: 10 QTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG 67
Score = 29.8 bits (67), Expect = 0.024
Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 94 ADGESGLSLLRDQI--VIQIGDEVDGMVMIRNGENRQGVCPLKYLQEV 139
+ E L+ + + VI+ + +N + G+ P Y+ +
Sbjct: 17 SVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVL 64
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 59.6 bits (144), Expect = 2e-13
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 17/75 (22%)
Query: 22 PTNLF--VVLYNFKSRHADELDLKPGYKVTVI-----DTSDQNWWKGK----------CM 64
P +F +++ + DEL LK G V VI + D+ W G
Sbjct: 9 PGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELE 68
Query: 65 GRVGYFPSNYVIKVQ 79
G FP N+ +VQ
Sbjct: 69 KCRGVFPENFTERVQ 83
>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 67
Score = 56.8 bits (137), Expect = 1e-12
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 22 PTNLFVV--LYNFKSRHAD-ELDLKPGYKVTVIDTSDQ-----NWWKGK-CMGRVGYFPS 72
P+ L LY+F + + E+ LK G + ++ D +WWK + G +GY P
Sbjct: 2 PSKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPY 61
Query: 73 NYV 75
NY+
Sbjct: 62 NYI 64
Score = 23.6 bits (51), Expect = 4.2
Identities = 6/53 (11%), Positives = 19/53 (35%), Gaps = 7/53 (13%)
Query: 92 QIADGESGLSLLRDQIVIQIGDE-----VDGMVMIRNGENRQGVCPLKYLQEV 139
+ + E ++L + ++ + + +R G P Y++ +
Sbjct: 17 ENPEME--VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII 67
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 56.0 bits (135), Expect = 3e-12
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 26 FVVLYNFKSRHADELDLKPGYKVTVIDTSDQN-WWKGKCM--GRVGYFPSNYV 75
+ + L L PG V + ++ WW+G+ VG+FP N V
Sbjct: 13 YYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRV 65
>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 74
Score = 55.5 bits (133), Expect = 5e-12
Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Query: 26 FVVLYNFKSRHADELDLKPGYKVTVIDTSDQNWWKGK------CMGRVGYFPSNYV 75
V+ ++ + +E+ + G V V+ + QN G+ P + +
Sbjct: 10 MTVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSIL 65
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN
cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 54.8 bits (132), Expect = 8e-12
Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 26 FVVLYNFK-SRHADELDLKPGYKVTVIDTSDQNW-WKGKCM--GRVGYFPSNYV 75
++ + L G +T++ +++ G+ G+FPS+Y
Sbjct: 10 VKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYT 63
Score = 26.0 bits (57), Expect = 0.55
Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 94 ADGESGLSLLRDQIVIQIGDEV-DGMVM-IRNGENRQGVCPLKYLQEV 139
+ ++ LS + ++ + E DG + + +G P Y + +
Sbjct: 19 GNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLL 66
>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 56
Score = 54.2 bits (130), Expect = 1e-11
Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 28 VLYNFKSRHADELDLKPGYKVTVIDTSDQNW---WKGKCMGRVGYFPSNYV 75
VLY + + DE+ + PG K++++ + G G P+ Y+
Sbjct: 4 VLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYI 54
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 83
Score = 54.8 bits (131), Expect = 1e-11
Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 17/76 (22%)
Query: 26 FVVLYNFKSRHADELDLKPGYKVTVI---------------DTSDQNWWKGKCM--GRVG 68
+ LY++K +++DL G +TV + W G G G
Sbjct: 6 YRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERG 65
Query: 69 YFPSNYVIKVQPGERP 84
FP YV + +
Sbjct: 66 DFPGTYVEYIGRKKIS 81
>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 55.1 bits (132), Expect = 1e-11
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 25 LFVVLYNFKSRHA------DELDLKPGYKVTVIDTSDQNWW--KGKCMGRVGYFPSNYVI 76
L V Y++ EL L G + V D++ + G+ G PSN+V
Sbjct: 19 LCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVD 78
Query: 77 KVQPGERPLQ 86
VQ E L
Sbjct: 79 FVQDNESRLA 88
Score = 29.7 bits (66), Expect = 0.047
Identities = 9/49 (18%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 92 QIADGESGLSLLRDQIVIQIG-DEVDGMVMIRNGENRQGVCPLKYLQEV 139
+ E+ L L + + G + DG + ++G+ P ++ V
Sbjct: 32 PNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFV 80
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 53.6 bits (128), Expect = 6e-11
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 22 PTNLFVVLYNFKSRHADELDLKPGYKVTVI---DTSDQNWWKGKCMG--------RVGYF 70
P ++ V L ++ + L + G V V + +W G G R+GYF
Sbjct: 20 PISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYF 79
Query: 71 PSNYVIKVQP 80
PS+ V + Q
Sbjct: 80 PSSIVREDQT 89
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 52.8 bits (126), Expect = 9e-11
Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 12/72 (16%)
Query: 25 LFV-VLYNFKSR-----HADELDLKPGYKVTVIDTSDQNWWKGK------CMGRVGYFPS 72
++ L+++ + L + G + VID D+ WW+ + +G+ PS
Sbjct: 2 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPS 61
Query: 73 NYVIKVQPGERP 84
++ + R
Sbjct: 62 KRRVERREWSRL 73
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium
channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 96
Score = 46.1 bits (109), Expect = 3e-08
Identities = 8/57 (14%), Positives = 21/57 (36%), Gaps = 10/57 (17%)
Query: 29 LYNFKSRHADE-------LDLKPGYKVTVIDTSDQNWWKGKCM---GRVGYFPSNYV 75
+ + D+ + + + V + + +WW G+ + +G+ PS
Sbjct: 27 NVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVK 83
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 40.1 bits (93), Expect = 1e-05
Identities = 8/74 (10%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 36 HADELDLKPGYKVTVIDTSDQNWWKGKC---MGRVGYFPSNYVIKVQPGERPLQVTHNLQ 92
+ + + + + + +WW G+ +G+ PS ++ ++ +
Sbjct: 43 PSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLENIRIQQEQKRKRFHG 102
Query: 93 IADGESGLSLLRDQ 106
+ S L +
Sbjct: 103 GKSSGNSSSSLGEM 116
>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein
adap) {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 30.5 bits (69), Expect = 0.013
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 39 ELDLKPGYKVTVIDTSDQNWWKGKCM-GRVGYFPSNYVI 76
+L +KPG + VI T+D + G+ GY +Y+
Sbjct: 38 DLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLA 76
>d1laja_ b.121.4.5 (A:) Cucumovirus coat protein {TAV (Tomato
aspermy virus) [TaxId: 12315]}
Length = 174
Score = 27.5 bits (61), Expect = 0.48
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 7/50 (14%)
Query: 43 KPGYKVTVIDTSDQNWWKGKCMGR-------VGYFPSNYVIKVQPGERPL 85
+ GY T +D K K G+ V +P V VQ P
Sbjct: 22 RAGYTYTSLDVRPTRTEKDKSFGQRLIIPVPVSEYPKKKVSCVQVRLNPS 71
>d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 414
Score = 27.2 bits (59), Expect = 0.76
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 1 MNLIPPL---ITLHDLTQKAHRLLPTNLF 26
+L+PPL I L+D A + L +
Sbjct: 16 KSLLPPLDNIINLYDFEYLASQTLTKQAW 44
>d1tb3a1 c.1.4.1 (A:1-349) Hydroxyacid oxidase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 349
Score = 26.0 bits (56), Expect = 1.7
Identities = 6/21 (28%), Positives = 9/21 (42%)
Query: 6 PLITLHDLTQKAHRLLPTNLF 26
PL+ L D A + L +
Sbjct: 1 PLVCLADFKAHAQKQLSKTSW 21
>d1c4ea_ g.3.4.1 (A:) Gurmarin, a sweet taste-suppressing
polypeptide {Gymnema sylvestre [TaxId: 4068]}
Length = 35
Score = 22.7 bits (48), Expect = 5.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 57 NWWKGKCMG 65
NWW KC+G
Sbjct: 27 NWWDHKCIG 35
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 24.3 bits (51), Expect = 7.0
Identities = 8/32 (25%), Positives = 10/32 (31%)
Query: 43 KPGYKVTVIDTSDQNWWKGKCMGRVGYFPSNY 74
K G K ++D D G G Y
Sbjct: 24 KQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAY 55
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.141 0.429
Gapped
Lambda K H
0.267 0.0623 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 535,479
Number of extensions: 23576
Number of successful extensions: 176
Number of sequences better than 10.0: 1
Number of HSP's gapped: 140
Number of HSP's successfully gapped: 75
Length of query: 139
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 62
Effective length of database: 1,350,386
Effective search space: 83723932
Effective search space used: 83723932
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (22.5 bits)