Query psy6451
Match_columns 332
No_of_seqs 362 out of 1923
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 18:14:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6451.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6451hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idv_A Protein disulfide-isome 99.9 2E-27 6.8E-32 213.6 15.0 170 61-232 14-232 (241)
2 1a0r_P Phosducin, MEKA, PP33; 99.9 1.6E-27 5.4E-32 217.7 14.2 152 24-249 77-230 (245)
3 2trc_P Phosducin, MEKA, PP33; 99.9 2.9E-27 9.9E-32 212.4 10.6 145 29-247 71-215 (217)
4 3evi_A Phosducin-like protein 99.9 2.9E-26 9.8E-31 186.8 12.3 112 131-247 2-116 (118)
5 1a8l_A Protein disulfide oxido 99.9 4.3E-25 1.5E-29 197.0 15.5 156 80-235 22-224 (226)
6 3zzx_A Thioredoxin; oxidoreduc 99.9 6.1E-23 2.1E-27 163.4 13.4 88 135-222 3-92 (105)
7 2ywm_A Glutaredoxin-like prote 99.9 1.4E-22 4.9E-27 181.3 16.0 164 72-238 10-221 (229)
8 2av4_A Thioredoxin-like protei 99.9 2E-22 6.9E-27 170.6 11.9 107 134-240 23-142 (160)
9 2dbc_A PDCL2, unnamed protein 99.9 7E-22 2.4E-26 163.7 12.9 118 127-249 5-125 (135)
10 3apo_A DNAJ homolog subfamily 99.9 1E-21 3.4E-26 205.7 16.5 159 62-222 543-748 (780)
11 2qsi_A Putative hydrogenase ex 99.9 4.2E-22 1.4E-26 165.6 10.6 103 133-236 16-122 (137)
12 2hls_A Protein disulfide oxido 99.9 2.2E-21 7.7E-26 176.6 13.4 161 70-234 14-223 (243)
13 2qgv_A Hydrogenase-1 operon pr 99.8 1.7E-21 5.9E-26 162.5 8.9 98 139-236 23-124 (140)
14 4euy_A Uncharacterized protein 99.8 9E-22 3.1E-26 155.0 6.6 100 134-233 2-101 (105)
15 3qfa_C Thioredoxin; protein-pr 99.8 1.4E-20 4.8E-25 151.3 12.6 102 130-232 9-112 (116)
16 3f3q_A Thioredoxin-1; His TAG, 99.8 3.1E-20 1.1E-24 147.5 14.2 95 129-223 3-97 (109)
17 1gh2_A Thioredoxin-like protei 99.8 3.4E-20 1.2E-24 146.0 13.6 91 134-224 3-95 (107)
18 3uem_A Protein disulfide-isome 99.8 4E-20 1.4E-24 176.5 15.5 163 61-227 116-347 (361)
19 3m9j_A Thioredoxin; oxidoreduc 99.8 6.8E-20 2.3E-24 143.1 13.6 99 134-233 2-102 (105)
20 2oe3_A Thioredoxin-3; electron 99.8 4.5E-20 1.5E-24 148.1 12.7 95 129-223 9-103 (114)
21 3apo_A DNAJ homolog subfamily 99.8 9.1E-20 3.1E-24 190.9 18.5 170 61-234 439-653 (780)
22 3gnj_A Thioredoxin domain prot 99.8 2E-19 6.9E-24 141.8 15.3 102 134-236 6-109 (111)
23 3gix_A Thioredoxin-like protei 99.8 7.2E-20 2.5E-24 154.3 13.1 113 134-246 5-130 (149)
24 2b5e_A Protein disulfide-isome 99.8 4.4E-20 1.5E-24 184.1 13.7 82 148-231 374-461 (504)
25 3d6i_A Monothiol glutaredoxin- 99.8 2.2E-19 7.6E-24 142.3 13.7 91 134-224 2-97 (112)
26 1ep7_A Thioredoxin CH1, H-type 99.8 2.1E-19 7E-24 142.2 13.3 101 132-233 2-107 (112)
27 2ppt_A Thioredoxin-2; thiredox 99.8 4.1E-19 1.4E-23 150.5 14.8 105 131-236 46-151 (155)
28 1r26_A Thioredoxin; redox-acti 99.8 3.6E-19 1.2E-23 145.4 13.8 98 134-232 21-118 (125)
29 1syr_A Thioredoxin; SGPP, stru 99.8 2.5E-19 8.6E-24 142.5 11.8 102 129-231 5-106 (112)
30 3tco_A Thioredoxin (TRXA-1); d 99.8 3.7E-19 1.3E-23 139.5 12.6 98 138-235 9-107 (109)
31 1v98_A Thioredoxin; oxidoreduc 99.8 2.8E-19 9.7E-24 147.9 12.4 85 152-236 52-137 (140)
32 2vim_A Thioredoxin, TRX; thior 99.8 6.8E-19 2.3E-23 137.0 13.6 96 135-231 2-99 (104)
33 1xfl_A Thioredoxin H1; AT3G510 99.8 5.3E-19 1.8E-23 144.0 13.4 94 129-222 13-110 (124)
34 2xc2_A Thioredoxinn; oxidoredu 99.8 5.6E-19 1.9E-23 141.4 13.2 89 133-222 14-104 (117)
35 2j23_A Thioredoxin; immune pro 99.8 3.5E-19 1.2E-23 144.0 11.7 104 128-232 11-116 (121)
36 2vlu_A Thioredoxin, thioredoxi 99.8 9.9E-19 3.4E-23 140.7 14.0 100 132-232 12-115 (122)
37 2vm1_A Thioredoxin, thioredoxi 99.8 1.2E-18 4.3E-23 138.7 14.2 93 130-222 4-100 (118)
38 1t00_A Thioredoxin, TRX; redox 99.8 9.6E-19 3.3E-23 138.5 13.3 102 133-234 6-108 (112)
39 1w4v_A Thioredoxin, mitochondr 99.8 1.9E-18 6.4E-23 139.2 14.8 106 129-234 9-116 (119)
40 2trx_A Thioredoxin; electron t 99.8 1.3E-18 4.4E-23 136.7 13.5 100 134-234 4-105 (108)
41 2l6c_A Thioredoxin; oxidoreduc 99.8 4.4E-19 1.5E-23 141.0 10.8 92 135-227 5-96 (110)
42 2wz9_A Glutaredoxin-3; protein 99.8 9E-19 3.1E-23 147.6 13.2 92 131-222 11-104 (153)
43 3die_A Thioredoxin, TRX; elect 99.8 7.2E-19 2.5E-23 137.3 11.7 97 134-232 5-102 (106)
44 1ti3_A Thioredoxin H, PTTRXH1; 99.8 1.2E-18 4.1E-23 137.8 13.1 103 131-234 3-109 (113)
45 3d22_A TRXH4, thioredoxin H-ty 99.8 1.5E-18 5E-23 143.2 14.1 97 131-228 23-123 (139)
46 1xwb_A Thioredoxin; dimerizati 99.8 1.4E-18 4.7E-23 135.7 12.8 89 134-222 2-93 (106)
47 2pu9_C TRX-F, thioredoxin F-ty 99.8 1.2E-18 4.1E-23 138.0 12.5 91 132-223 5-98 (111)
48 3p2a_A Thioredoxin 2, putative 99.8 2.4E-18 8.1E-23 143.7 14.5 104 132-236 38-142 (148)
49 2e0q_A Thioredoxin; electron t 99.8 2.3E-18 7.8E-23 133.4 13.0 96 140-235 6-101 (104)
50 3hz4_A Thioredoxin; NYSGXRC, P 99.8 1.4E-18 4.9E-23 144.1 12.6 104 134-238 8-113 (140)
51 1nsw_A Thioredoxin, TRX; therm 99.8 1.4E-18 4.9E-23 135.7 11.1 91 141-231 8-99 (105)
52 1thx_A Thioredoxin, thioredoxi 99.8 5E-18 1.7E-22 134.4 13.8 100 134-234 9-110 (115)
53 2i4a_A Thioredoxin; acidophIle 99.8 2.8E-18 9.5E-23 134.1 12.1 98 134-232 4-103 (107)
54 1qgv_A Spliceosomal protein U5 99.8 1.7E-18 5.8E-23 144.7 11.5 88 134-221 5-95 (142)
55 3emx_A Thioredoxin; structural 99.8 1.1E-18 3.7E-23 144.0 9.7 93 132-228 16-117 (135)
56 2voc_A Thioredoxin; electron t 99.8 2.5E-18 8.6E-23 136.8 11.1 88 140-228 8-96 (112)
57 2yzu_A Thioredoxin; redox prot 99.8 3.7E-18 1.3E-22 133.5 11.7 98 134-232 3-101 (109)
58 1x5d_A Protein disulfide-isome 99.8 4.3E-18 1.5E-22 138.6 12.6 105 132-237 7-117 (133)
59 3uvt_A Thioredoxin domain-cont 99.8 4.9E-18 1.7E-22 133.6 12.3 98 134-233 7-108 (111)
60 1fb6_A Thioredoxin M; electron 99.8 6.5E-18 2.2E-22 131.6 12.8 93 141-233 8-102 (105)
61 2o8v_B Thioredoxin 1; disulfid 99.8 3.1E-18 1E-22 140.3 11.3 101 134-235 24-126 (128)
62 3dxb_A Thioredoxin N-terminall 99.8 4.2E-18 1.4E-22 152.3 12.8 109 128-236 8-117 (222)
63 3h79_A Thioredoxin-like protei 99.8 4E-18 1.4E-22 138.7 11.5 101 132-233 15-124 (127)
64 1dby_A Chloroplast thioredoxin 99.8 4.1E-18 1.4E-22 133.5 11.0 95 139-233 7-103 (107)
65 1faa_A Thioredoxin F; electron 99.8 7.9E-18 2.7E-22 135.9 13.0 92 131-223 17-111 (124)
66 2i1u_A Thioredoxin, TRX, MPT46 99.8 8E-18 2.7E-22 134.8 12.8 98 131-228 11-109 (121)
67 3cxg_A Putative thioredoxin; m 99.8 3.2E-18 1.1E-22 141.1 10.3 94 128-222 16-115 (133)
68 3aps_A DNAJ homolog subfamily 99.8 4.5E-18 1.5E-22 136.8 10.7 99 134-233 5-109 (122)
69 3qou_A Protein YBBN; thioredox 99.7 4.4E-18 1.5E-22 157.1 11.8 101 133-234 8-111 (287)
70 2dj1_A Protein disulfide-isome 99.7 5.3E-18 1.8E-22 139.7 10.9 100 132-233 17-120 (140)
71 2dml_A Protein disulfide-isome 99.7 7.6E-18 2.6E-22 136.9 11.7 105 131-236 16-123 (130)
72 2f51_A Thioredoxin; electron t 99.7 1.3E-17 4.6E-22 134.3 12.6 91 134-224 5-101 (118)
73 3ul3_B Thioredoxin, thioredoxi 99.7 3.6E-18 1.2E-22 139.3 8.0 86 146-231 38-124 (128)
74 2dj0_A Thioredoxin-related tra 99.7 3.9E-18 1.3E-22 140.7 8.2 102 132-234 7-118 (137)
75 1x5e_A Thioredoxin domain cont 99.7 1.5E-17 5.1E-22 134.8 11.1 94 131-228 6-101 (126)
76 3hxs_A Thioredoxin, TRXP; elec 99.7 1.9E-17 6.5E-22 136.6 11.2 101 132-234 22-136 (141)
77 2es7_A Q8ZP25_salty, putative 99.7 4.8E-18 1.7E-22 142.3 6.8 101 134-235 19-123 (142)
78 2l5l_A Thioredoxin; structural 99.7 5.3E-17 1.8E-21 133.8 12.8 95 132-228 9-117 (136)
79 3apq_A DNAJ homolog subfamily 99.7 4.8E-17 1.6E-21 144.0 12.4 102 134-236 99-201 (210)
80 1oaz_A Thioredoxin 1; immune s 99.7 5.1E-18 1.8E-22 138.1 5.2 98 134-232 5-118 (123)
81 1zma_A Bacterocin transport ac 99.7 1.4E-17 4.9E-22 133.5 7.7 93 139-231 18-115 (118)
82 3iv4_A Putative oxidoreductase 99.7 5.8E-17 2E-21 129.8 10.6 88 132-220 6-98 (112)
83 1mek_A Protein disulfide isome 99.7 1.1E-17 3.9E-22 133.0 5.1 94 134-228 9-108 (120)
84 2fwh_A Thiol:disulfide interch 99.7 6.8E-17 2.3E-21 132.9 9.6 95 133-227 12-118 (134)
85 2l57_A Uncharacterized protein 99.7 1.5E-16 5E-21 128.8 10.4 81 147-227 23-107 (126)
86 1wmj_A Thioredoxin H-type; str 99.7 6.2E-18 2.1E-22 137.1 2.2 92 131-222 13-108 (130)
87 2r2j_A Thioredoxin domain-cont 99.7 1.9E-16 6.6E-21 152.7 11.8 102 134-236 7-116 (382)
88 3fk8_A Disulphide isomerase; A 99.7 1.8E-16 6.1E-21 129.5 9.8 75 147-221 26-110 (133)
89 3idv_A Protein disulfide-isome 99.7 3.3E-16 1.1E-20 140.1 11.9 100 133-234 16-119 (241)
90 2dj3_A Protein disulfide-isome 99.7 4.4E-17 1.5E-21 132.9 5.4 100 132-232 7-113 (133)
91 3ga4_A Dolichyl-diphosphooligo 99.7 3.6E-16 1.2E-20 135.6 10.4 83 133-216 19-116 (178)
92 2yj7_A LPBCA thioredoxin; oxid 99.5 8.3E-18 2.8E-22 130.6 0.0 89 145-233 14-103 (106)
93 2b5e_A Protein disulfide-isome 99.6 6.7E-16 2.3E-20 153.8 13.2 104 132-236 14-121 (504)
94 3f8u_A Protein disulfide-isome 99.6 5.3E-16 1.8E-20 153.4 11.6 96 139-234 7-106 (481)
95 2djj_A PDI, protein disulfide- 99.6 1.4E-16 4.6E-21 127.7 5.8 92 133-228 8-108 (121)
96 3us3_A Calsequestrin-1; calciu 99.6 9.2E-16 3.2E-20 147.4 12.4 102 131-234 12-121 (367)
97 3ed3_A Protein disulfide-isome 99.6 1.1E-15 3.7E-20 143.0 11.8 100 133-233 18-138 (298)
98 1nho_A Probable thioredoxin; b 99.6 4.5E-16 1.5E-20 116.7 6.7 79 152-234 3-82 (85)
99 3dml_A Putative uncharacterize 99.6 4.4E-16 1.5E-20 125.8 6.9 85 149-233 17-106 (116)
100 1fo5_A Thioredoxin; disulfide 99.6 8.6E-16 2.9E-20 115.1 7.5 79 151-233 3-82 (85)
101 3q6o_A Sulfhydryl oxidase 1; p 99.6 3.1E-15 1.1E-19 135.2 11.8 84 132-216 12-102 (244)
102 3us3_A Calsequestrin-1; calciu 99.6 6.6E-15 2.3E-19 141.4 13.7 166 61-234 12-224 (367)
103 1sji_A Calsequestrin 2, calseq 99.6 5.8E-15 2E-19 140.5 13.1 165 61-234 10-222 (350)
104 1wou_A Thioredoxin -related pr 99.6 1.5E-15 5.2E-20 123.0 7.4 82 135-216 7-105 (123)
105 2kuc_A Putative disulphide-iso 99.6 4.1E-15 1.4E-19 120.6 9.6 81 148-228 25-112 (130)
106 1sji_A Calsequestrin 2, calseq 99.6 1.7E-15 5.8E-20 144.2 8.3 98 132-232 11-117 (350)
107 1z6n_A Hypothetical protein PA 99.6 3.8E-15 1.3E-19 128.1 8.3 81 141-221 43-129 (167)
108 2djk_A PDI, protein disulfide- 99.6 9.3E-15 3.2E-19 120.3 10.2 96 139-236 12-114 (133)
109 3f9u_A Putative exported cytoc 99.6 4E-15 1.4E-19 127.0 8.3 92 148-239 45-168 (172)
110 2lst_A Thioredoxin; structural 99.3 3.2E-16 1.1E-20 127.4 0.0 91 142-232 11-111 (130)
111 2ju5_A Thioredoxin disulfide i 99.5 2.6E-14 9E-19 120.4 10.3 78 145-223 42-136 (154)
112 1sen_A Thioredoxin-like protei 99.5 3.4E-15 1.2E-19 127.4 4.8 85 140-224 36-125 (164)
113 3ph9_A Anterior gradient prote 99.5 8.7E-15 3E-19 123.8 7.1 89 134-222 27-120 (151)
114 1a8l_A Protein disulfide oxido 99.5 3E-14 1E-18 126.5 10.9 98 139-236 8-112 (226)
115 3kp8_A Vkorc1/thioredoxin doma 99.5 7.2E-15 2.5E-19 116.7 5.8 69 150-228 12-86 (106)
116 3f8u_A Protein disulfide-isome 99.5 1E-13 3.4E-18 137.1 14.1 141 63-211 2-183 (481)
117 1lu4_A Soluble secreted antige 99.5 8.4E-14 2.9E-18 112.8 10.6 81 149-230 23-129 (136)
118 3t58_A Sulfhydryl oxidase 1; o 99.5 6.5E-14 2.2E-18 140.5 11.1 101 133-234 13-124 (519)
119 2c0g_A ERP29 homolog, windbeut 99.5 6.6E-14 2.3E-18 127.7 10.1 95 134-234 18-129 (248)
120 2qc7_A ERP31, ERP28, endoplasm 99.5 9.3E-14 3.2E-18 126.1 10.9 97 134-235 7-117 (240)
121 2b5x_A YKUV protein, TRXY; thi 99.5 1.8E-13 6E-18 112.3 11.5 83 149-231 28-139 (148)
122 3ira_A Conserved protein; meth 99.5 1.1E-13 3.7E-18 119.6 10.6 98 121-219 10-121 (173)
123 1ilo_A Conserved hypothetical 99.5 6E-14 2.1E-18 103.3 7.6 68 153-227 2-71 (77)
124 1zzo_A RV1677; thioredoxin fol 99.5 1.9E-13 6.4E-18 110.4 10.9 82 149-231 24-129 (136)
125 2r2j_A Thioredoxin domain-cont 99.5 1.5E-13 5.1E-18 132.4 11.4 164 61-234 4-215 (382)
126 3qcp_A QSOX from trypanosoma b 99.5 3.2E-14 1.1E-18 140.3 6.4 95 132-227 23-130 (470)
127 3erw_A Sporulation thiol-disul 99.5 2E-13 6.8E-18 111.6 10.1 80 149-228 33-140 (145)
128 3uem_A Protein disulfide-isome 99.5 4E-13 1.4E-17 127.8 13.5 171 62-236 17-229 (361)
129 2ywm_A Glutaredoxin-like prote 99.4 6E-13 2.1E-17 118.5 11.9 96 141-236 9-114 (229)
130 2fgx_A Putative thioredoxin; N 99.4 2.6E-13 8.9E-18 108.0 8.3 73 151-227 29-101 (107)
131 3or5_A Thiol:disulfide interch 99.4 6.6E-13 2.2E-17 111.3 10.5 88 149-236 33-150 (165)
132 3raz_A Thioredoxin-related pro 99.4 5.8E-13 2E-17 110.7 9.9 80 149-228 23-131 (151)
133 2f9s_A Thiol-disulfide oxidore 99.4 7.8E-13 2.7E-17 109.7 10.5 78 149-226 25-127 (151)
134 3hcz_A Possible thiol-disulfid 99.4 5E-13 1.7E-17 109.7 8.6 76 149-224 30-133 (148)
135 2b1k_A Thiol:disulfide interch 99.4 8.5E-13 2.9E-17 111.5 9.9 91 148-240 49-163 (168)
136 3lor_A Thiol-disulfide isomera 99.4 1.2E-12 4.1E-17 109.3 10.6 88 149-240 29-154 (160)
137 1hyu_A AHPF, alkyl hydroperoxi 99.4 6.6E-12 2.2E-16 125.8 17.7 143 81-228 19-191 (521)
138 1kng_A Thiol:disulfide interch 99.4 1.1E-12 3.7E-17 109.0 9.9 90 149-239 41-154 (156)
139 3evi_A Phosducin-like protein 99.4 3.9E-13 1.3E-17 108.9 6.9 61 61-122 2-65 (118)
140 2h30_A Thioredoxin, peptide me 99.4 2.6E-13 8.8E-18 113.9 5.8 79 149-227 37-146 (164)
141 3eyt_A Uncharacterized protein 99.4 1.5E-12 5E-17 108.7 10.4 88 149-240 27-151 (158)
142 1ttz_A Conserved hypothetical 99.4 2.2E-13 7.4E-18 104.5 4.7 58 154-217 3-60 (87)
143 4evm_A Thioredoxin family prot 99.4 1.9E-12 6.5E-17 104.1 10.5 79 149-227 21-129 (138)
144 3fkf_A Thiol-disulfide oxidore 99.4 2.2E-12 7.4E-17 105.9 10.3 72 149-220 32-132 (148)
145 3ia1_A THIO-disulfide isomeras 99.4 2.1E-12 7.3E-17 107.2 10.3 74 151-225 31-132 (154)
146 2lja_A Putative thiol-disulfid 99.4 1.6E-12 5.6E-17 107.5 9.4 79 149-227 29-133 (152)
147 3gl3_A Putative thiol:disulfid 99.4 3.2E-12 1.1E-16 105.7 11.0 77 149-225 27-128 (152)
148 3q6o_A Sulfhydryl oxidase 1; p 99.4 7.1E-12 2.4E-16 113.0 14.2 168 61-238 11-237 (244)
149 2lrn_A Thiol:disulfide interch 99.4 3.9E-12 1.3E-16 105.8 10.9 73 149-221 28-128 (152)
150 2l5o_A Putative thioredoxin; s 99.4 2.8E-12 9.5E-17 106.3 9.9 89 149-241 27-141 (153)
151 2e7p_A Glutaredoxin; thioredox 99.3 5.4E-13 1.9E-17 106.2 4.5 95 142-247 11-110 (116)
152 3hdc_A Thioredoxin family prot 99.3 7.4E-12 2.5E-16 104.9 11.6 79 149-227 40-140 (158)
153 3ed3_A Protein disulfide-isome 99.3 1.1E-11 3.9E-16 115.7 14.0 174 61-247 16-270 (298)
154 3ha9_A Uncharacterized thiored 99.3 4.6E-12 1.6E-16 106.7 10.0 73 149-223 36-149 (165)
155 3fw2_A Thiol-disulfide oxidore 99.3 2E-11 6.9E-16 101.2 13.4 72 149-220 32-134 (150)
156 2lrt_A Uncharacterized protein 99.3 7.8E-12 2.7E-16 104.5 10.6 78 149-226 34-137 (152)
157 3eur_A Uncharacterized protein 99.3 7.3E-12 2.5E-16 102.9 9.8 73 149-221 30-132 (142)
158 3kh7_A Thiol:disulfide interch 99.3 9.3E-12 3.2E-16 106.8 9.9 90 149-240 57-170 (176)
159 1o8x_A Tryparedoxin, TRYX, TXN 99.3 6.9E-12 2.4E-16 103.5 8.8 73 149-221 27-128 (146)
160 1i5g_A Tryparedoxin II; electr 99.3 7.5E-12 2.5E-16 103.0 8.8 72 149-220 27-127 (144)
161 3zzx_A Thioredoxin; oxidoreduc 99.3 1.8E-12 6.2E-17 102.5 4.4 74 64-137 2-77 (105)
162 3lwa_A Secreted thiol-disulfid 99.3 9.6E-12 3.3E-16 106.7 9.3 84 149-232 58-176 (183)
163 3s9f_A Tryparedoxin; thioredox 99.3 1.2E-11 4.2E-16 105.0 9.5 72 149-220 47-147 (165)
164 1o73_A Tryparedoxin; electron 99.3 8.6E-12 2.9E-16 102.4 8.1 72 149-220 27-127 (144)
165 3kcm_A Thioredoxin family prot 99.3 1.9E-11 6.5E-16 101.3 10.3 77 149-225 27-129 (154)
166 3ewl_A Uncharacterized conserv 99.3 9.4E-12 3.2E-16 101.9 8.1 70 149-218 26-125 (142)
167 1jfu_A Thiol:disulfide interch 99.3 5.4E-11 1.9E-15 102.1 12.9 76 149-224 59-165 (186)
168 2hls_A Protein disulfide oxido 99.3 2.2E-11 7.4E-16 110.4 10.6 95 138-235 12-115 (243)
169 2hyx_A Protein DIPZ; thioredox 99.2 5.7E-11 2E-15 113.5 11.1 88 149-236 81-198 (352)
170 2ywi_A Hypothetical conserved 99.2 4.8E-11 1.6E-15 103.2 9.5 72 149-220 44-148 (196)
171 2av4_A Thioredoxin-like protei 99.2 2.4E-11 8.3E-16 102.7 7.1 74 64-137 23-99 (160)
172 4fo5_A Thioredoxin-like protei 99.2 6.6E-11 2.2E-15 97.3 9.2 73 149-221 31-132 (143)
173 3kp9_A Vkorc1/thioredoxin doma 99.2 6.9E-12 2.4E-16 116.7 3.3 78 141-228 190-271 (291)
174 2cvb_A Probable thiol-disulfid 99.2 8.8E-11 3E-15 101.1 10.0 70 149-218 32-132 (188)
175 2dbc_A PDCL2, unnamed protein 99.2 5.3E-11 1.8E-15 97.8 7.3 64 59-123 7-73 (135)
176 1wjk_A C330018D20RIK protein; 99.1 9.1E-11 3.1E-15 91.8 7.9 62 149-216 14-77 (100)
177 2k8s_A Thioredoxin; dimer, str 99.1 3.2E-11 1.1E-15 90.0 4.6 62 154-217 4-67 (80)
178 1ego_A Glutaredoxin; electron 99.1 1.2E-10 4.1E-15 87.2 7.7 63 153-217 2-70 (85)
179 4f9z_D Endoplasmic reticulum r 99.1 6.3E-10 2.1E-14 99.4 13.5 150 61-214 8-200 (227)
180 4euy_A Uncharacterized protein 99.1 2.9E-11 9.9E-16 94.3 3.9 74 64-137 2-75 (105)
181 2lus_A Thioredoxion; CR-Trp16, 98.7 6.4E-12 2.2E-16 102.7 0.0 71 149-219 24-125 (143)
182 3t58_A Sulfhydryl oxidase 1; o 99.1 4.5E-10 1.5E-14 112.6 12.9 150 61-219 11-221 (519)
183 1gh2_A Thioredoxin-like protei 99.1 9.6E-11 3.3E-15 91.4 5.9 75 63-137 2-78 (107)
184 2rli_A SCO2 protein homolog, m 99.1 5.1E-10 1.7E-14 94.3 10.8 90 149-242 25-165 (171)
185 2oe3_A Thioredoxin-3; electron 99.1 4.3E-11 1.5E-15 95.3 3.8 78 59-136 9-86 (114)
186 3f3q_A Thioredoxin-1; His TAG, 99.1 1.1E-10 3.8E-15 91.9 5.6 78 60-137 4-81 (109)
187 3drn_A Peroxiredoxin, bacterio 99.1 8.2E-10 2.8E-14 92.9 11.3 74 149-222 27-130 (161)
188 2k6v_A Putative cytochrome C o 99.1 2.4E-10 8.3E-15 96.3 7.2 75 149-223 34-157 (172)
189 3qfa_C Thioredoxin; protein-pr 99.0 1.1E-10 3.7E-15 93.1 4.2 79 59-137 8-88 (116)
190 2ggt_A SCO1 protein homolog, m 99.0 6.6E-10 2.3E-14 92.8 9.2 89 149-241 22-161 (164)
191 2ls5_A Uncharacterized protein 98.6 2.4E-11 8.3E-16 101.6 0.0 74 149-222 32-134 (159)
192 3m9j_A Thioredoxin; oxidoreduc 99.0 2E-10 7E-15 88.7 5.2 73 64-136 2-76 (105)
193 3u5r_E Uncharacterized protein 99.0 9.9E-10 3.4E-14 97.5 10.1 70 149-218 57-159 (218)
194 1we0_A Alkyl hydroperoxide red 99.0 9.2E-10 3.1E-14 94.9 9.5 92 149-240 30-156 (187)
195 2dlx_A UBX domain-containing p 99.0 2.2E-09 7.6E-14 90.6 11.5 96 147-247 39-142 (153)
196 3cmi_A Peroxiredoxin HYR1; thi 99.0 1E-09 3.4E-14 93.2 9.3 79 149-228 31-159 (171)
197 2v1m_A Glutathione peroxidase; 99.0 2E-09 7E-14 90.3 10.6 82 149-230 30-160 (169)
198 3d6i_A Monothiol glutaredoxin- 99.0 3.4E-10 1.2E-14 88.9 5.2 74 64-137 2-80 (112)
199 1r26_A Thioredoxin; redox-acti 99.0 3.3E-10 1.1E-14 91.9 5.1 74 64-137 21-94 (125)
200 1xvw_A Hypothetical protein RV 99.0 1.3E-09 4.6E-14 90.9 9.0 77 149-225 34-144 (160)
201 2vm1_A Thioredoxin, thioredoxi 99.0 4.2E-10 1.4E-14 88.8 5.3 78 59-136 3-84 (118)
202 2bmx_A Alkyl hydroperoxidase C 99.0 1.5E-09 5.1E-14 94.3 9.3 77 149-225 44-154 (195)
203 1ep7_A Thioredoxin CH1, H-type 99.0 3.2E-10 1.1E-14 88.8 4.5 75 62-136 2-81 (112)
204 2vup_A Glutathione peroxidase- 99.0 1.6E-09 5.3E-14 93.8 9.2 89 149-241 47-185 (190)
205 2wz9_A Glutaredoxin-3; protein 99.0 3.4E-10 1.2E-14 94.7 4.6 79 59-137 9-89 (153)
206 3gix_A Thioredoxin-like protei 99.0 4.3E-10 1.5E-14 94.1 5.1 75 63-137 4-81 (149)
207 1kte_A Thioltransferase; redox 99.0 7.5E-10 2.6E-14 86.5 5.9 92 143-246 5-104 (105)
208 1zof_A Alkyl hydroperoxide-red 99.0 1.4E-09 4.9E-14 94.6 8.2 91 149-239 32-159 (198)
209 3h79_A Thioredoxin-like protei 98.9 7E-10 2.4E-14 89.5 5.6 76 60-136 13-95 (127)
210 3dxb_A Thioredoxin N-terminall 98.9 1.2E-09 4.3E-14 97.0 7.7 80 57-137 7-88 (222)
211 3gnj_A Thioredoxin domain prot 98.9 7.6E-10 2.6E-14 86.3 5.6 76 61-137 3-80 (111)
212 3kij_A Probable glutathione pe 98.9 3E-09 1E-13 91.2 9.7 93 149-241 37-174 (180)
213 2pu9_C TRX-F, thioredoxin F-ty 98.9 7.9E-10 2.7E-14 86.7 5.5 76 60-136 3-81 (111)
214 2j23_A Thioredoxin; immune pro 98.9 5.5E-10 1.9E-14 89.5 4.6 77 59-135 12-90 (121)
215 3gyk_A 27KDA outer membrane pr 98.9 2.6E-09 8.9E-14 90.9 9.0 41 149-189 21-61 (175)
216 2vim_A Thioredoxin, TRX; thior 98.9 8.5E-10 2.9E-14 84.9 5.2 73 64-136 1-75 (104)
217 2p5q_A Glutathione peroxidase 98.9 2.5E-09 8.4E-14 89.8 8.4 80 149-228 31-159 (170)
218 1xfl_A Thioredoxin H1; AT3G510 98.9 6.6E-10 2.3E-14 89.7 4.6 78 59-136 13-94 (124)
219 1ti3_A Thioredoxin H, PTTRXH1; 98.9 4.4E-10 1.5E-14 88.0 3.4 76 60-135 2-81 (113)
220 2ppt_A Thioredoxin-2; thiredox 98.9 1.3E-09 4.5E-14 91.6 6.4 76 61-137 46-122 (155)
221 2xc2_A Thioredoxinn; oxidoredu 98.9 1.2E-09 4.1E-14 86.6 5.4 73 63-136 14-88 (117)
222 2h01_A 2-Cys peroxiredoxin; th 98.9 6.5E-09 2.2E-13 89.9 10.3 92 149-240 30-158 (192)
223 1syr_A Thioredoxin; SGPP, stru 98.9 9.6E-10 3.3E-14 86.6 4.4 77 60-136 6-82 (112)
224 3tco_A Thioredoxin (TRXA-1); d 98.9 1.3E-09 4.4E-14 84.4 5.0 75 61-136 3-78 (109)
225 1qgv_A Spliceosomal protein U5 98.9 1.9E-09 6.6E-14 89.3 6.3 75 63-137 4-81 (142)
226 1uul_A Tryparedoxin peroxidase 98.9 6.4E-09 2.2E-13 90.9 9.9 92 149-240 35-164 (202)
227 3qou_A Protein YBBN; thioredox 98.9 1.5E-09 5.1E-14 99.7 6.0 76 61-137 6-84 (287)
228 1xwb_A Thioredoxin; dimerizati 98.9 1.7E-09 5.7E-14 83.5 5.3 73 64-136 2-77 (106)
229 1faa_A Thioredoxin F; electron 98.9 2.1E-09 7.1E-14 86.0 5.8 76 59-135 15-93 (124)
230 3d22_A TRXH4, thioredoxin H-ty 98.9 1.3E-09 4.4E-14 89.1 4.6 77 61-137 23-103 (139)
231 2dj3_A Protein disulfide-isome 98.9 2.6E-09 8.9E-14 86.3 6.3 77 60-137 5-85 (133)
232 2dj0_A Thioredoxin-related tra 98.9 1.8E-09 6.2E-14 88.3 5.0 72 60-132 5-80 (137)
233 1zye_A Thioredoxin-dependent p 98.9 1.2E-08 4.2E-13 90.6 10.8 92 149-240 55-184 (220)
234 2yzu_A Thioredoxin; redox prot 98.9 1.9E-09 6.6E-14 83.3 4.9 73 62-135 1-74 (109)
235 3cxg_A Putative thioredoxin; m 98.8 1.3E-09 4.3E-14 89.2 3.9 78 59-137 17-96 (133)
236 2p31_A CL683, glutathione pero 98.8 1.7E-09 5.9E-14 92.8 4.9 77 149-225 48-169 (181)
237 3dwv_A Glutathione peroxidase- 98.8 5.6E-09 1.9E-13 90.1 8.2 79 149-227 45-173 (187)
238 2dj1_A Protein disulfide-isome 98.8 2.9E-09 9.8E-14 86.9 5.8 74 62-136 17-94 (140)
239 1qmv_A Human thioredoxin perox 98.8 1.4E-08 4.7E-13 88.3 10.5 77 149-225 33-147 (197)
240 2vlu_A Thioredoxin, thioredoxi 98.8 2.1E-09 7.3E-14 85.5 4.7 76 61-136 11-90 (122)
241 3die_A Thioredoxin, TRX; elect 98.8 3E-09 1E-13 82.0 5.4 74 61-136 2-76 (106)
242 2l6c_A Thioredoxin; oxidoreduc 98.8 1.2E-09 4E-14 86.1 3.1 72 64-136 4-75 (110)
243 2djj_A PDI, protein disulfide- 98.8 4.7E-09 1.6E-13 83.3 6.6 62 61-123 6-74 (121)
244 1nsw_A Thioredoxin, TRX; therm 98.8 3.7E-09 1.3E-13 81.6 5.5 71 64-135 2-73 (105)
245 1eej_A Thiol:disulfide interch 98.8 5.7E-09 2E-13 92.6 7.3 81 149-235 85-209 (216)
246 2e0q_A Thioredoxin; electron t 98.8 2.9E-09 1E-13 81.4 4.7 72 64-136 1-72 (104)
247 2gs3_A PHGPX, GPX-4, phospholi 98.8 1.4E-08 4.9E-13 87.3 9.6 84 149-232 48-181 (185)
248 2hze_A Glutaredoxin-1; thiored 98.8 1.5E-09 5E-14 86.7 3.0 85 152-246 19-111 (114)
249 2dml_A Protein disulfide-isome 98.8 3.4E-09 1.2E-13 85.3 5.0 75 61-136 16-92 (130)
250 2obi_A PHGPX, GPX-4, phospholi 98.8 6.5E-09 2.2E-13 89.1 7.0 78 149-226 46-173 (183)
251 2voc_A Thioredoxin; electron t 98.8 7E-09 2.4E-13 81.6 6.6 72 64-137 3-75 (112)
252 2f8a_A Glutathione peroxidase 98.8 2E-08 6.7E-13 88.7 10.1 42 149-190 46-89 (208)
253 2f51_A Thioredoxin; electron t 98.8 3.9E-09 1.3E-13 84.2 5.1 74 63-136 4-79 (118)
254 1mek_A Protein disulfide isome 98.8 3.8E-09 1.3E-13 83.1 4.7 72 62-134 7-82 (120)
255 2i81_A 2-Cys peroxiredoxin; st 98.8 2.6E-08 8.8E-13 88.2 10.6 92 149-240 51-179 (213)
256 1wmj_A Thioredoxin H-type; str 98.8 1.8E-09 6.2E-14 86.7 2.8 78 60-137 12-93 (130)
257 3aps_A DNAJ homolog subfamily 98.8 3.7E-09 1.3E-13 84.1 4.6 72 63-135 4-77 (122)
258 2trx_A Thioredoxin; electron t 98.8 9.8E-09 3.4E-13 79.6 6.8 75 62-137 2-78 (108)
259 3hz4_A Thioredoxin; NYSGXRC, P 98.8 4.1E-09 1.4E-13 86.6 4.7 76 61-137 5-82 (140)
260 1x5d_A Protein disulfide-isome 98.8 5.4E-09 1.9E-13 84.2 5.4 76 61-137 6-87 (133)
261 2jsy_A Probable thiol peroxida 98.8 4.4E-08 1.5E-12 82.3 11.1 75 149-223 43-148 (167)
262 1t00_A Thioredoxin, TRX; redox 98.8 7E-09 2.4E-13 81.1 5.7 74 62-136 5-80 (112)
263 1xvq_A Thiol peroxidase; thior 98.8 2.8E-08 9.6E-13 84.8 9.9 72 149-221 43-147 (175)
264 1x5e_A Thioredoxin domain cont 98.8 6.9E-09 2.4E-13 83.2 5.5 74 60-136 5-80 (126)
265 3uvt_A Thioredoxin domain-cont 98.8 4.6E-09 1.6E-13 81.7 4.3 73 62-136 5-81 (111)
266 3hxs_A Thioredoxin, TRXP; elec 98.8 6.9E-09 2.4E-13 84.8 5.3 77 60-137 20-109 (141)
267 3p2a_A Thioredoxin 2, putative 98.7 8.2E-09 2.8E-13 85.3 5.7 76 61-137 37-113 (148)
268 1a0r_P Phosducin, MEKA, PP33; 98.7 4.2E-09 1.4E-13 95.7 4.2 57 78-135 131-187 (245)
269 2i4a_A Thioredoxin; acidophIle 98.7 1.2E-08 4.2E-13 78.7 6.3 73 63-136 3-77 (107)
270 3ztl_A Thioredoxin peroxidase; 98.7 4.2E-08 1.4E-12 87.3 10.3 78 149-226 68-183 (222)
271 2o8v_B Thioredoxin 1; disulfid 98.7 1.9E-08 6.6E-13 81.5 7.1 75 62-137 22-98 (128)
272 3emx_A Thioredoxin; structural 98.7 3.1E-09 1.1E-13 86.9 2.2 55 61-119 15-69 (135)
273 1w4v_A Thioredoxin, mitochondr 98.7 1.3E-08 4.4E-13 81.1 5.8 77 60-136 10-88 (119)
274 2b7k_A SCO1 protein; metalloch 98.7 5E-08 1.7E-12 85.2 10.0 91 149-243 40-181 (200)
275 2l5l_A Thioredoxin; structural 98.7 1.4E-08 4.9E-13 82.8 5.9 77 60-137 7-96 (136)
276 2i1u_A Thioredoxin, TRX, MPT46 98.7 1.5E-08 5E-13 80.2 5.7 74 61-135 11-86 (121)
277 2a4v_A Peroxiredoxin DOT5; yea 98.7 1.2E-07 4.2E-12 79.1 11.4 77 149-226 34-140 (159)
278 1thx_A Thioredoxin, thioredoxi 98.7 1.7E-08 5.9E-13 78.9 5.7 74 62-136 7-82 (115)
279 2trc_P Phosducin, MEKA, PP33; 98.7 5.8E-09 2E-13 92.9 3.2 58 78-136 118-175 (217)
280 2qsi_A Putative hydrogenase ex 98.7 8.2E-09 2.8E-13 85.4 3.8 75 61-137 15-93 (137)
281 1t3b_A Thiol:disulfide interch 98.7 1.8E-08 6.2E-13 89.1 6.0 72 149-226 85-200 (211)
282 2cq9_A GLRX2 protein, glutared 98.7 3.4E-08 1.2E-12 80.7 7.0 93 140-247 17-117 (130)
283 1r7h_A NRDH-redoxin; thioredox 98.7 6.3E-08 2.2E-12 70.2 7.7 59 154-222 3-64 (75)
284 3gkn_A Bacterioferritin comigr 98.7 8.4E-08 2.9E-12 80.2 9.2 76 149-224 34-146 (163)
285 1h75_A Glutaredoxin-like prote 98.7 7.1E-08 2.4E-12 71.3 7.8 55 154-215 3-60 (81)
286 1fb6_A Thioredoxin M; electron 98.7 2.8E-08 9.4E-13 76.4 5.7 72 64-136 2-75 (105)
287 2qgv_A Hydrogenase-1 operon pr 98.6 7.2E-09 2.5E-13 86.1 2.3 74 63-137 18-95 (140)
288 1dby_A Chloroplast thioredoxin 98.6 2.2E-08 7.5E-13 77.5 4.6 71 64-135 3-75 (107)
289 3h93_A Thiol:disulfide interch 98.6 8.7E-08 3E-12 82.7 8.7 41 149-189 24-65 (192)
290 2ht9_A Glutaredoxin-2; thiored 98.6 5.7E-08 2E-12 81.2 7.2 94 138-246 37-138 (146)
291 3ul3_B Thioredoxin, thioredoxi 98.6 2.2E-08 7.5E-13 80.8 3.9 68 69-136 31-99 (128)
292 3apq_A DNAJ homolog subfamily 98.6 2.9E-08 9.9E-13 87.2 5.0 73 63-136 98-171 (210)
293 3c1r_A Glutaredoxin-1; oxidize 98.6 8.5E-08 2.9E-12 77.0 7.3 92 141-244 16-116 (118)
294 3hd5_A Thiol:disulfide interch 98.6 1.7E-07 5.8E-12 81.1 9.7 42 149-190 24-66 (195)
295 1xzo_A BSSCO, hypothetical pro 98.6 7.5E-08 2.6E-12 81.0 7.0 76 149-224 32-157 (174)
296 3ga4_A Dolichyl-diphosphooligo 98.6 4.3E-08 1.5E-12 84.7 5.5 75 62-137 18-107 (178)
297 1nm3_A Protein HI0572; hybrid, 98.5 8.5E-07 2.9E-11 79.4 13.2 131 79-216 32-230 (241)
298 1oaz_A Thioredoxin 1; immune s 98.5 5.3E-08 1.8E-12 78.4 4.1 75 62-137 3-93 (123)
299 1wou_A Thioredoxin -related pr 98.5 5.5E-08 1.9E-12 78.0 4.2 55 65-119 7-71 (123)
300 3iv4_A Putative oxidoreductase 98.5 4.9E-08 1.7E-12 77.8 3.7 61 62-123 6-66 (112)
301 1zma_A Bacterocin transport ac 98.5 5.2E-08 1.8E-12 77.2 3.8 54 61-115 11-65 (118)
302 2c0d_A Thioredoxin peroxidase 98.5 7.9E-07 2.7E-11 79.1 10.6 75 149-223 55-166 (221)
303 2yan_A Glutaredoxin-3; oxidore 98.5 2.8E-07 9.7E-12 72.1 6.7 67 142-217 9-84 (105)
304 1v58_A Thiol:disulfide interch 98.5 3.6E-07 1.2E-11 82.4 8.1 77 150-228 97-224 (241)
305 2yj7_A LPBCA thioredoxin; oxid 97.8 2.5E-08 8.4E-13 76.4 0.0 72 64-136 3-76 (106)
306 3qcp_A QSOX from trypanosoma b 98.4 1.2E-07 4.3E-12 93.4 5.0 75 61-136 22-107 (470)
307 1fo5_A Thioredoxin; disulfide 98.4 2.3E-07 7.9E-12 68.5 5.2 57 81-137 3-60 (85)
308 2fwh_A Thiol:disulfide interch 98.4 8.2E-08 2.8E-12 78.1 2.7 58 63-120 12-74 (134)
309 2wfc_A Peroxiredoxin 5, PRDX5; 98.4 1.7E-06 5.8E-11 73.5 10.9 77 149-225 30-145 (167)
310 2l57_A Uncharacterized protein 98.4 1E-07 3.6E-12 76.2 2.8 61 75-135 21-84 (126)
311 1v98_A Thioredoxin; oxidoreduc 98.4 1.8E-07 6.1E-12 76.4 4.2 99 33-137 9-108 (140)
312 3rhb_A ATGRXC5, glutaredoxin-C 98.4 5.1E-07 1.7E-11 71.4 6.6 89 142-245 11-108 (113)
313 2pn8_A Peroxiredoxin-4; thiore 98.4 1.4E-06 4.6E-11 76.9 10.0 77 149-225 47-161 (211)
314 3ixr_A Bacterioferritin comigr 98.4 1.9E-06 6.5E-11 73.6 10.5 76 149-224 50-162 (179)
315 3fk8_A Disulphide isomerase; A 98.4 1.6E-07 5.5E-12 75.8 3.4 54 78-131 27-86 (133)
316 2l4c_A Endoplasmic reticulum r 98.4 3.7E-06 1.3E-10 68.2 11.4 81 134-221 23-104 (124)
317 2klx_A Glutaredoxin; thioredox 98.4 4.5E-07 1.5E-11 68.4 5.4 57 153-216 7-66 (89)
318 2es7_A Q8ZP25_salty, putative 98.4 1.4E-07 4.7E-12 78.4 2.6 74 63-137 18-95 (142)
319 1nm3_A Protein HI0572; hybrid, 98.4 1.5E-06 5.2E-11 77.7 9.6 77 149-225 32-146 (241)
320 2khp_A Glutaredoxin; thioredox 98.4 1.1E-06 3.6E-11 66.6 7.4 80 153-246 7-91 (92)
321 1nho_A Probable thioredoxin; b 98.3 3.6E-07 1.2E-11 67.4 4.4 56 82-137 3-59 (85)
322 1n8j_A AHPC, alkyl hydroperoxi 98.3 2.2E-06 7.4E-11 73.8 10.0 76 149-224 29-139 (186)
323 3a2v_A Probable peroxiredoxin; 98.3 1.2E-06 4.1E-11 79.6 8.7 100 149-248 32-171 (249)
324 4g2e_A Peroxiredoxin; redox pr 98.3 7.5E-07 2.6E-11 74.6 6.4 77 149-225 29-141 (157)
325 2r37_A Glutathione peroxidase 98.3 2.3E-06 7.7E-11 75.4 9.1 41 149-190 37-79 (207)
326 1q98_A Thiol peroxidase, TPX; 98.3 3.6E-06 1.2E-10 70.7 9.6 74 149-222 42-149 (165)
327 1psq_A Probable thiol peroxida 98.3 5E-06 1.7E-10 69.6 10.3 76 149-224 41-147 (163)
328 2i3y_A Epididymal secretory gl 98.3 3E-06 1E-10 75.2 9.3 41 149-190 55-97 (215)
329 3hz8_A Thiol:disulfide interch 98.3 5.7E-06 1.9E-10 71.8 10.9 42 149-190 23-65 (193)
330 2lqo_A Putative glutaredoxin R 98.2 1.7E-06 5.9E-11 66.5 6.4 77 153-247 5-86 (92)
331 2c0g_A ERP29 homolog, windbeut 98.2 7.4E-07 2.5E-11 80.9 5.1 113 62-179 16-173 (248)
332 3qpm_A Peroxiredoxin; oxidored 98.2 4E-06 1.4E-10 75.5 9.6 78 149-226 76-191 (240)
333 2djk_A PDI, protein disulfide- 98.2 1.9E-06 6.7E-11 70.0 6.8 71 61-133 5-76 (133)
334 3qmx_A Glutaredoxin A, glutare 98.2 3.3E-06 1.1E-10 65.6 7.8 61 150-217 14-79 (99)
335 1z6n_A Hypothetical protein PA 98.2 4.1E-07 1.4E-11 77.6 2.6 51 79-129 53-103 (167)
336 1un2_A DSBA, thiol-disulfide i 98.2 5.7E-07 2E-11 78.7 3.4 43 150-192 113-159 (197)
337 1tp9_A Peroxiredoxin, PRX D (t 98.2 7.2E-06 2.5E-10 68.8 10.0 74 149-222 34-146 (162)
338 3me7_A Putative uncharacterize 98.2 4E-06 1.4E-10 71.0 8.3 75 149-223 27-147 (170)
339 4gqc_A Thiol peroxidase, perox 98.2 6.5E-07 2.2E-11 75.8 3.3 84 143-226 26-144 (164)
340 1fov_A Glutaredoxin 3, GRX3; a 98.2 4E-06 1.4E-10 61.6 7.2 56 154-216 3-62 (82)
341 3ic4_A Glutaredoxin (GRX-1); s 98.2 3.1E-06 1.1E-10 64.0 6.1 59 154-222 14-81 (92)
342 3uma_A Hypothetical peroxiredo 98.2 7.1E-06 2.4E-10 70.9 9.1 74 150-223 56-168 (184)
343 2yzh_A Probable thiol peroxida 98.1 8.4E-06 2.9E-10 68.7 9.3 73 149-222 46-152 (171)
344 3zrd_A Thiol peroxidase; oxido 98.1 8.5E-06 2.9E-10 71.1 9.4 74 149-222 77-184 (200)
345 3p7x_A Probable thiol peroxida 98.1 8.9E-06 3E-10 68.3 9.0 74 149-223 45-149 (166)
346 4f9z_D Endoplasmic reticulum r 98.1 9.6E-06 3.3E-10 72.0 9.6 76 132-214 9-84 (227)
347 2qc7_A ERP31, ERP28, endoplasm 98.1 2.4E-06 8.1E-11 77.2 5.6 71 62-137 5-87 (240)
348 2h8l_A Protein disulfide-isome 98.1 0.00011 3.6E-09 66.2 16.3 143 63-211 7-202 (252)
349 1sen_A Thioredoxin-like protei 98.1 1.3E-06 4.4E-11 73.9 3.1 55 70-124 36-91 (164)
350 2lst_A Thioredoxin; structural 97.4 4.2E-07 1.4E-11 72.9 0.0 66 71-136 10-81 (130)
351 2pwj_A Mitochondrial peroxired 98.1 8.1E-06 2.8E-10 69.4 7.9 75 149-224 43-156 (171)
352 2znm_A Thiol:disulfide interch 98.1 7.1E-06 2.4E-10 70.6 7.1 41 149-189 21-62 (195)
353 3kp8_A Vkorc1/thioredoxin doma 98.1 4.2E-07 1.4E-11 71.5 -0.7 53 81-136 13-69 (106)
354 3tjj_A Peroxiredoxin-4; thiore 98.0 9.9E-06 3.4E-10 73.6 8.1 78 149-226 90-205 (254)
355 3mng_A Peroxiredoxin-5, mitoch 98.0 1.3E-05 4.4E-10 68.5 8.3 78 149-226 42-160 (173)
356 2rem_A Disulfide oxidoreductas 98.0 4E-05 1.4E-09 65.6 11.4 40 150-189 25-65 (193)
357 3h8q_A Thioredoxin reductase 3 98.0 1.2E-05 4.1E-10 63.8 7.4 68 141-217 8-82 (114)
358 3ph9_A Anterior gradient prote 98.0 4.3E-06 1.5E-10 70.1 4.6 50 71-120 35-86 (151)
359 4hde_A SCO1/SENC family lipopr 98.0 4.9E-05 1.7E-09 64.3 11.3 89 149-239 31-168 (170)
360 3msz_A Glutaredoxin 1; alpha-b 98.0 8.9E-06 3E-10 60.6 5.8 61 152-217 4-73 (89)
361 3gv1_A Disulfide interchange p 98.0 1.7E-05 5.8E-10 66.1 7.6 72 149-228 13-130 (147)
362 4dvc_A Thiol:disulfide interch 98.0 2.7E-05 9.3E-10 65.8 9.1 41 149-189 20-61 (184)
363 2kuc_A Putative disulphide-iso 98.0 3.5E-06 1.2E-10 67.3 3.1 66 70-135 13-88 (130)
364 3ctg_A Glutaredoxin-2; reduced 98.0 6E-06 2.1E-10 67.3 4.5 71 140-216 27-105 (129)
365 1z6m_A Conserved hypothetical 98.0 1.8E-05 6.3E-10 66.8 7.7 40 150-189 27-69 (175)
366 3nzn_A Glutaredoxin; structura 97.9 2.1E-05 7.2E-10 61.0 7.4 54 151-209 21-83 (103)
367 1prx_A HORF6; peroxiredoxin, h 97.9 9.4E-05 3.2E-09 65.7 11.9 74 152-225 34-153 (224)
368 3ira_A Conserved protein; meth 97.9 3.6E-06 1.2E-10 72.2 2.1 57 70-126 29-89 (173)
369 1ilo_A Conserved hypothetical 97.9 6E-06 2E-10 59.7 2.9 36 83-118 2-38 (77)
370 1lu4_A Soluble secreted antige 97.9 1.4E-05 4.6E-10 63.7 4.9 43 79-121 23-65 (136)
371 1wik_A Thioredoxin-like protei 97.8 5.3E-05 1.8E-09 59.4 8.0 66 142-216 7-81 (109)
372 2v2g_A Peroxiredoxin 6; oxidor 97.8 0.00011 3.7E-09 65.8 10.2 76 150-225 29-149 (233)
373 2ju5_A Thioredoxin disulfide i 97.8 1.6E-05 5.4E-10 66.2 4.1 46 78-123 45-95 (154)
374 3f9u_A Putative exported cytoc 97.8 1.9E-05 6.3E-10 66.5 4.3 54 70-123 33-94 (172)
375 3l9s_A Thiol:disulfide interch 97.7 0.00011 3.9E-09 63.5 9.4 41 150-190 21-65 (191)
376 3ec3_A Protein disulfide-isome 97.7 0.00085 2.9E-08 60.2 15.5 144 63-211 7-201 (250)
377 3erw_A Sporulation thiol-disul 97.7 2.3E-05 8E-10 62.9 4.2 42 79-120 33-76 (145)
378 2e7p_A Glutaredoxin; thioredox 97.7 1.5E-05 5.1E-10 62.5 2.7 45 72-120 11-55 (116)
379 1xcc_A 1-Cys peroxiredoxin; un 97.7 9.5E-05 3.2E-09 65.5 7.8 73 152-224 34-149 (220)
380 3dml_A Putative uncharacterize 97.7 2.4E-05 8.2E-10 62.7 3.4 41 79-122 17-63 (116)
381 1zzo_A RV1677; thioredoxin fol 97.6 4.9E-05 1.7E-09 60.2 5.0 42 79-120 24-65 (136)
382 2b5x_A YKUV protein, TRXY; thi 97.6 4.6E-05 1.6E-09 61.4 4.8 43 78-120 27-70 (148)
383 1i5g_A Tryparedoxin II; electr 97.5 7.8E-05 2.7E-09 60.4 4.9 42 79-120 27-71 (144)
384 3hcz_A Possible thiol-disulfid 97.5 3.8E-05 1.3E-09 62.0 2.9 44 79-122 30-75 (148)
385 3raz_A Thioredoxin-related pro 97.5 7.7E-05 2.6E-09 61.0 4.7 42 79-120 23-66 (151)
386 1un2_A DSBA, thiol-disulfide i 97.5 2.9E-05 1E-09 67.7 2.0 41 80-120 113-157 (197)
387 3ha9_A Uncharacterized thiored 97.5 8.3E-05 2.8E-09 61.7 4.7 42 79-120 36-77 (165)
388 1o8x_A Tryparedoxin, TRYX, TXN 97.5 9.2E-05 3.1E-09 60.2 4.9 42 79-120 27-71 (146)
389 3kp9_A Vkorc1/thioredoxin doma 97.5 2.4E-05 8.3E-10 72.5 1.5 64 72-137 191-255 (291)
390 3eur_A Uncharacterized protein 97.5 9.6E-05 3.3E-09 59.8 4.9 41 80-120 31-76 (142)
391 2wci_A Glutaredoxin-4; redox-a 97.5 0.00022 7.6E-09 58.5 7.1 91 143-247 28-127 (135)
392 3l9v_A Putative thiol-disulfid 97.5 6.2E-05 2.1E-09 64.9 3.9 42 150-191 14-59 (189)
393 1o73_A Tryparedoxin; electron 97.5 0.00011 3.7E-09 59.3 4.9 42 79-120 27-71 (144)
394 1ego_A Glutaredoxin; electron 97.4 5E-05 1.7E-09 56.0 2.4 39 83-121 2-40 (85)
395 3keb_A Probable thiol peroxida 97.4 0.001 3.5E-08 59.2 11.4 72 149-223 47-157 (224)
396 3s9f_A Tryparedoxin; thioredox 97.4 8.5E-05 2.9E-09 62.3 4.2 43 79-121 47-92 (165)
397 2ec4_A FAS-associated factor 1 97.4 0.00097 3.3E-08 57.2 10.7 92 148-239 53-170 (178)
398 2fgx_A Putative thioredoxin; N 97.4 6.5E-05 2.2E-09 59.2 3.0 54 82-137 30-83 (107)
399 3fkf_A Thiol-disulfide oxidore 97.4 9E-05 3.1E-09 59.7 3.7 42 79-120 32-76 (148)
400 3lwa_A Secreted thiol-disulfid 97.4 0.00013 4.5E-09 61.7 4.9 43 79-121 58-108 (183)
401 3l4n_A Monothiol glutaredoxin- 97.4 0.00021 7.1E-09 58.0 5.9 93 141-245 5-105 (127)
402 2b1k_A Thiol:disulfide interch 97.4 0.00018 6E-09 59.8 5.6 41 78-120 49-89 (168)
403 2h30_A Thioredoxin, peptide me 97.4 0.00016 5.3E-09 59.6 5.1 57 63-120 22-80 (164)
404 3hdc_A Thioredoxin family prot 97.4 0.00013 4.5E-09 60.1 4.6 43 79-121 40-84 (158)
405 3or5_A Thiol:disulfide interch 97.4 0.00015 5.3E-09 59.6 5.0 43 79-121 33-77 (165)
406 2h8l_A Protein disulfide-isome 97.4 0.00072 2.5E-08 60.7 9.7 73 134-213 8-81 (252)
407 2f9s_A Thiol-disulfide oxidore 97.4 0.00016 5.4E-09 58.9 4.8 42 79-120 25-68 (151)
408 3lor_A Thiol-disulfide isomera 97.4 0.00015 5.2E-09 59.5 4.6 41 79-119 29-72 (160)
409 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00013 4.4E-09 72.7 4.5 66 72-137 107-174 (521)
410 3gx8_A Monothiol glutaredoxin- 97.3 0.0012 4.1E-08 52.9 9.3 92 147-248 12-112 (121)
411 2lrn_A Thiol:disulfide interch 97.3 0.0002 6.9E-09 58.5 4.8 42 79-120 28-71 (152)
412 3eyt_A Uncharacterized protein 97.3 0.0002 6.7E-09 58.7 4.6 41 79-119 27-70 (158)
413 1ttz_A Conserved hypothetical 97.3 5.3E-05 1.8E-09 57.4 0.8 49 84-137 3-51 (87)
414 3ewl_A Uncharacterized conserv 97.3 0.0002 7E-09 57.5 4.3 42 79-120 26-72 (142)
415 3gl3_A Putative thiol:disulfid 97.3 0.00026 9E-09 57.5 5.0 42 79-120 27-70 (152)
416 4fo5_A Thioredoxin-like protei 97.3 0.00022 7.6E-09 57.6 4.4 42 79-120 31-74 (143)
417 2wem_A Glutaredoxin-related pr 97.3 0.0015 5.3E-08 52.1 9.3 88 147-247 16-113 (118)
418 2lus_A Thioredoxion; CR-Trp16, 96.3 4.3E-05 1.5E-09 61.5 0.0 42 80-121 25-71 (143)
419 4eo3_A Bacterioferritin comigr 97.2 0.0025 8.5E-08 59.7 12.1 89 149-240 23-138 (322)
420 3kcm_A Thioredoxin family prot 97.2 0.00031 1.1E-08 57.2 5.0 42 79-120 27-70 (154)
421 3gha_A Disulfide bond formatio 97.2 0.0018 6.2E-08 56.3 10.2 41 150-190 29-73 (202)
422 3feu_A Putative lipoprotein; a 97.2 0.00018 6.2E-09 61.8 3.5 41 150-191 22-62 (185)
423 2lja_A Putative thiol-disulfid 97.2 0.00038 1.3E-08 56.5 5.0 43 79-121 29-73 (152)
424 3ia1_A THIO-disulfide isomeras 97.2 0.00032 1.1E-08 57.2 4.5 38 81-119 31-68 (154)
425 4evm_A Thioredoxin family prot 97.1 0.00037 1.3E-08 54.8 4.6 41 79-119 21-62 (138)
426 2lrt_A Uncharacterized protein 97.1 0.00039 1.3E-08 57.1 4.6 42 80-121 35-78 (152)
427 1kng_A Thiol:disulfide interch 97.1 0.00029 9.9E-09 57.4 3.8 41 79-120 41-81 (156)
428 2k8s_A Thioredoxin; dimer, str 97.1 0.00012 4.1E-09 53.7 1.3 55 83-137 3-59 (80)
429 3ec3_A Protein disulfide-isome 97.1 0.0019 6.6E-08 57.8 9.3 74 133-213 7-82 (250)
430 2l5o_A Putative thioredoxin; s 97.1 0.00053 1.8E-08 55.6 5.1 41 79-119 27-69 (153)
431 2p5q_A Glutathione peroxidase 97.1 0.00051 1.7E-08 56.8 4.9 42 79-120 31-74 (170)
432 1wjk_A C330018D20RIK protein; 97.1 0.0001 3.6E-09 56.9 0.4 53 80-136 15-69 (100)
433 2v1m_A Glutathione peroxidase; 97.0 0.00056 1.9E-08 56.5 4.9 42 79-120 30-73 (169)
434 3fw2_A Thiol-disulfide oxidore 97.0 0.00052 1.8E-08 55.9 4.4 42 79-120 32-78 (150)
435 1jfu_A Thiol:disulfide interch 97.0 0.00057 1.9E-08 57.7 4.8 42 79-120 59-102 (186)
436 2cvb_A Probable thiol-disulfid 97.0 0.00057 2E-08 57.9 4.7 42 79-120 32-74 (188)
437 3ipz_A Monothiol glutaredoxin- 96.9 0.0028 9.7E-08 49.5 7.6 65 145-216 12-84 (109)
438 2p31_A CL683, glutathione pero 96.9 0.00087 3E-08 56.7 4.9 42 79-120 48-91 (181)
439 4f82_A Thioredoxin reductase; 96.9 0.0039 1.3E-07 53.3 8.6 78 145-222 43-158 (176)
440 3kh7_A Thiol:disulfide interch 96.8 0.00095 3.2E-08 56.3 4.6 39 79-119 57-95 (176)
441 3kij_A Probable glutathione pe 96.8 0.0011 3.9E-08 55.9 4.8 41 79-119 37-79 (180)
442 2ywi_A Hypothetical conserved 96.8 0.0012 4.2E-08 56.0 5.0 41 80-120 45-88 (196)
443 2vup_A Glutathione peroxidase- 96.8 0.0013 4.4E-08 56.1 5.1 42 79-120 47-90 (190)
444 3dwv_A Glutathione peroxidase- 96.8 0.00099 3.4E-08 56.8 4.4 42 79-120 45-88 (187)
445 2k6v_A Putative cytochrome C o 96.8 0.00099 3.4E-08 55.1 4.1 42 79-120 34-81 (172)
446 2obi_A PHGPX, GPX-4, phospholi 96.7 0.0014 4.7E-08 55.4 4.9 42 79-120 46-89 (183)
447 2hyx_A Protein DIPZ; thioredox 96.7 0.0014 4.8E-08 62.2 5.2 42 79-120 81-124 (352)
448 2ls5_A Uncharacterized protein 95.7 0.00026 9E-09 58.2 0.0 43 79-121 32-78 (159)
449 3f4s_A Alpha-DSBA1, putative u 96.7 0.013 4.6E-07 51.8 11.2 40 150-189 39-82 (226)
450 3cmi_A Peroxiredoxin HYR1; thi 96.7 0.0013 4.4E-08 55.0 4.1 40 79-119 31-72 (171)
451 3hd5_A Thiol:disulfide interch 96.7 0.0015 5.2E-08 55.8 4.7 42 79-120 24-66 (195)
452 1aba_A Glutaredoxin; electron 96.6 0.0055 1.9E-07 45.4 7.1 57 154-216 2-76 (87)
453 2f8a_A Glutathione peroxidase 96.6 0.0018 6E-08 56.6 4.9 42 79-120 46-89 (208)
454 2rli_A SCO2 protein homolog, m 96.6 0.0017 5.6E-08 53.8 4.5 41 80-120 26-73 (171)
455 3bj5_A Protein disulfide-isome 96.6 0.018 6.1E-07 47.4 10.5 78 134-212 16-99 (147)
456 2gs3_A PHGPX, GPX-4, phospholi 96.5 0.0023 7.9E-08 54.3 4.9 42 79-120 48-91 (185)
457 2jsy_A Probable thiol peroxida 96.5 0.0024 8.3E-08 52.8 4.9 42 79-120 43-85 (167)
458 3sbc_A Peroxiredoxin TSA1; alp 96.5 0.0078 2.7E-07 53.1 8.2 78 149-226 51-166 (216)
459 3u5r_E Uncharacterized protein 96.5 0.0025 8.4E-08 55.8 4.9 41 80-120 58-101 (218)
460 3hz8_A Thiol:disulfide interch 96.5 0.0021 7.1E-08 55.3 4.3 41 80-120 24-65 (193)
461 3zyw_A Glutaredoxin-3; metal b 96.5 0.0055 1.9E-07 48.1 6.4 60 149-216 14-82 (111)
462 1xvw_A Hypothetical protein RV 96.4 0.0021 7.1E-08 52.7 3.7 41 80-120 35-79 (160)
463 2ggt_A SCO1 protein homolog, m 96.4 0.0029 1E-07 51.8 4.6 42 79-120 22-70 (164)
464 1t1v_A SH3BGRL3, SH3 domain-bi 96.4 0.013 4.6E-07 44.0 7.8 56 154-216 4-71 (93)
465 1we0_A Alkyl hydroperoxide red 96.3 0.0029 1E-07 53.6 4.3 41 80-120 31-74 (187)
466 3bci_A Disulfide bond protein 96.3 0.0079 2.7E-07 50.9 7.0 119 78-238 9-179 (186)
467 3drn_A Peroxiredoxin, bacterio 96.3 0.0035 1.2E-07 51.7 4.5 41 80-120 28-72 (161)
468 3gyk_A 27KDA outer membrane pr 96.3 0.0035 1.2E-07 52.4 4.6 38 79-116 21-58 (175)
469 2bmx_A Alkyl hydroperoxidase C 96.3 0.0029 9.9E-08 54.1 3.9 41 80-120 45-88 (195)
470 1qmv_A Human thioredoxin perox 96.3 0.0033 1.1E-07 53.8 4.3 42 79-120 33-77 (197)
471 3l9v_A Putative thiol-disulfid 96.2 0.002 6.8E-08 55.3 2.7 40 81-120 15-58 (189)
472 2ct6_A SH3 domain-binding glut 96.2 0.014 4.6E-07 45.7 7.3 58 152-216 8-83 (111)
473 1xzo_A BSSCO, hypothetical pro 96.2 0.0036 1.2E-07 51.8 4.2 42 79-120 32-78 (174)
474 3feu_A Putative lipoprotein; a 96.2 0.0024 8.3E-08 54.6 3.0 40 80-120 22-61 (185)
475 1kte_A Thioltransferase; redox 96.1 0.0019 6.4E-08 49.4 1.8 43 73-117 5-47 (105)
476 1zof_A Alkyl hydroperoxide-red 95.9 0.0045 1.5E-07 53.0 3.5 42 79-120 32-76 (198)
477 2h01_A 2-Cys peroxiredoxin; th 95.9 0.0048 1.6E-07 52.5 3.7 42 79-120 30-74 (192)
478 1uul_A Tryparedoxin peroxidase 95.9 0.0063 2.1E-07 52.3 4.3 41 80-120 36-79 (202)
479 1eej_A Thiol:disulfide interch 95.8 0.0052 1.8E-07 53.7 3.4 30 79-108 85-114 (216)
480 2dlx_A UBX domain-containing p 95.8 0.0075 2.6E-07 50.3 4.2 43 78-120 40-86 (153)
481 1xvq_A Thiol peroxidase; thior 95.7 0.0091 3.1E-07 50.1 4.4 41 79-120 43-84 (175)
482 3h93_A Thiol:disulfide interch 95.7 0.0073 2.5E-07 51.3 3.9 38 79-116 24-62 (192)
483 2i81_A 2-Cys peroxiredoxin; st 95.7 0.0087 3E-07 52.2 4.4 42 79-120 51-95 (213)
484 1r7h_A NRDH-redoxin; thioredox 95.6 0.0054 1.8E-07 43.5 2.3 33 84-121 3-35 (75)
485 2b7k_A SCO1 protein; metalloch 95.6 0.011 3.7E-07 50.8 4.7 42 79-120 40-87 (200)
486 1zye_A Thioredoxin-dependent p 95.5 0.011 3.7E-07 51.8 4.5 41 80-120 56-99 (220)
487 3kzq_A Putative uncharacterize 95.4 0.16 5.6E-06 43.5 11.7 32 153-184 4-36 (208)
488 3gkn_A Bacterioferritin comigr 95.4 0.017 5.8E-07 47.3 5.0 41 80-120 35-78 (163)
489 3ztl_A Thioredoxin peroxidase; 95.4 0.012 4.2E-07 51.5 4.2 42 79-120 68-112 (222)
490 3c7m_A Thiol:disulfide interch 95.3 0.027 9.1E-07 47.6 6.2 41 150-190 17-59 (195)
491 1h75_A Glutaredoxin-like prote 95.3 0.0079 2.7E-07 43.4 2.3 33 84-121 3-35 (81)
492 1t3b_A Thiol:disulfide interch 95.2 0.011 3.7E-07 51.6 3.3 30 79-108 85-114 (211)
493 2cq9_A GLRX2 protein, glutared 95.1 0.0085 2.9E-07 48.2 2.3 34 71-106 18-51 (130)
494 1q98_A Thiol peroxidase, TPX; 95.1 0.017 5.9E-07 47.8 4.2 42 79-120 42-84 (165)
495 2hze_A Glutaredoxin-1; thiored 95.1 0.004 1.4E-07 48.8 0.1 37 82-120 19-55 (114)
496 1psq_A Probable thiol peroxida 94.9 0.019 6.5E-07 47.4 3.9 42 79-120 41-83 (163)
497 2yzh_A Probable thiol peroxida 94.8 0.02 6.8E-07 47.5 3.9 41 80-120 47-88 (171)
498 2ht9_A Glutaredoxin-2; thiored 94.8 0.012 4.3E-07 48.4 2.3 35 70-106 39-73 (146)
499 2pn8_A Peroxiredoxin-4; thiore 94.7 0.024 8.3E-07 49.2 4.3 42 79-120 47-91 (211)
500 3tue_A Tryparedoxin peroxidase 94.6 0.076 2.6E-06 46.8 7.2 78 149-226 55-170 (219)
No 1
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.95 E-value=2e-27 Score=213.58 Aligned_cols=170 Identities=15% Similarity=0.244 Sum_probs=140.2
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh----ceeeecccCCCCcccccCCCCc---
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE----TRFIKLNVERAPFLTGQQGHGE--- 133 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~----~~f~kvd~~k~pfl~~k~g~g~--- 133 (332)
.+.+.+++ +++|.+++.++++++|+||++||++|+.+.+.|.++|..+.+ +.|+.+|+...+.++.+.+...
T Consensus 14 ~~~v~~l~-~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (241)
T 3idv_A 14 ENGVLVLN-DANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPT 92 (241)
T ss_dssp ETTEEEEC-TTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCCcEEec-ccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCE
Confidence 46788885 679999999999999999999999999999999999998865 7899999887544433333211
Q ss_pred --------------------------------------ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHH
Q psy6451 134 --------------------------------------YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTL 175 (332)
Q Consensus 134 --------------------------------------~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~L 175 (332)
.....+.++|...+..+++++|+||++||++|+.+.|.|..+
T Consensus 93 ~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~ 172 (241)
T 3idv_A 93 IKILKKGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKA 172 (241)
T ss_dssp EEEEETTEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHH
T ss_pred EEEEcCCCcccccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHH
Confidence 122235567778888889999999999999999999999999
Q ss_pred HHHcC----CceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhHhH
Q psy6451 176 CKKHL----ETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 176 a~~~~----~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~ 232 (332)
+..+. .+.|++||++..+.++++|+|.++||+++|++|+.+. +.|......+..|+
T Consensus 173 a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~-~~g~~~~~~l~~~l 232 (241)
T 3idv_A 173 AKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPYD-YNGPREKYGIVDYM 232 (241)
T ss_dssp HHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE-CCSCCSHHHHHHHH
T ss_pred HHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEEE-ecCCCCHHHHHHHH
Confidence 98864 3999999999999999999999999999999999887 77766555543333
No 2
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.95 E-value=1.6e-27 Score=217.66 Aligned_cols=152 Identities=21% Similarity=0.310 Sum_probs=128.0
Q ss_pred HHHhc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHH
Q psy6451 24 IYRLE--NLDLDSIEKLREDHLKKLKAKAKRNQELKALGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEH 101 (332)
Q Consensus 24 ~~~l~--~~d~~~l~~~r~~Rl~el~~~~~~~~~~~~~g~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~ 101 (332)
++.++ +.|+++|++||++||++|++.... ..+||.|.+|++..+|.+++.++
T Consensus 77 ~~~~~~d~eDe~fL~~~r~~Rl~el~~~~~~-----~~~~G~V~ei~s~~~f~~~v~~~--------------------- 130 (245)
T 1a0r_P 77 YELIHKDKEDENCLRKYRRQCMQDMHQKLSF-----GPRYGFVYELESGEQFLETIEKE--------------------- 130 (245)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHHHHHHHCC-----CCCCCSEEECCSHHHHHHHHHSS---------------------
T ss_pred hhhcccccccHHHHHHHHHHHHHHHHHHhhc-----cCCCCeEEEeCCHHHHHHHHHHh---------------------
Confidence 44554 346779999999999999976431 24699999997777777666421
Q ss_pred HHHHHHhhhhceeeecccCCCCcccccCCCCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC
Q psy6451 102 MKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE 181 (332)
Q Consensus 102 l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~ 181 (332)
.++++|||+||||||++|+.+.|+|..||.+|++
T Consensus 131 ----------------------------------------------~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~ 164 (245)
T 1a0r_P 131 ----------------------------------------------QKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM 164 (245)
T ss_dssp ----------------------------------------------CTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT
T ss_pred ----------------------------------------------cCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC
Confidence 1367889999999999999999999999999999
Q ss_pred ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhHhHHHHHHHHHHHcCCcccc
Q psy6451 182 TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCADFSTEMLEWRIAQAGVIDYE 249 (332)
Q Consensus 182 v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~~~g~l~~~ 249 (332)
++|++||++. +.++.+|+|.++||+++|++|+.+.+++|+...++ ..|+.+.|+++|.++|+|+..
T Consensus 165 v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g-~~~~~e~Le~~L~~~g~l~~~ 230 (245)
T 1a0r_P 165 VKFCKIKASN-TGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLA-EEFFTGDVESFLNEYGLLPEK 230 (245)
T ss_dssp SEEEEEEHHH-HCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSC-TTCCHHHHHHHHHTTTCSCCC
T ss_pred CEEEEEeCCc-HHHHHHCCCCCCCEEEEEECCEEEEEEeCCccccc-ccccHHHHHHHHHHcCCCCCc
Confidence 9999999988 77899999999999999999999999999987655 578899999999999999644
No 3
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.94 E-value=2.9e-27 Score=212.36 Aligned_cols=145 Identities=21% Similarity=0.321 Sum_probs=124.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHh
Q psy6451 29 NLDLDSIEKLREDHLKKLKAKAKRNQELKALGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKK 108 (332)
Q Consensus 29 ~~d~~~l~~~r~~Rl~el~~~~~~~~~~~~~g~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~ 108 (332)
+.|+++|++||++||++|++.... ..+||.|.+|.+..+|.+++.++
T Consensus 71 ~~d~~fl~~~r~~Rl~el~~~~~~-----~~~~g~v~~i~~~~~f~~~v~~~---------------------------- 117 (217)
T 2trc_P 71 KEDEGCLRKYRRQCMQDMHQKLSF-----GPRYGFVYELETGEQFLETIEKE---------------------------- 117 (217)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHCC-----CCCCCSEEECCSHHHHHHHHHHS----------------------------
T ss_pred cccHHHHHHHHHHHHHHHHHHHHh-----ccCCCeEEEcCCHHHHHHHHHhc----------------------------
Confidence 447789999999999999875432 24699999997777777666421
Q ss_pred hhhceeeecccCCCCcccccCCCCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEE
Q psy6451 109 HLETRFIKLNVERAPFLTGQQGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLN 188 (332)
Q Consensus 109 ~~~~~f~kvd~~k~pfl~~k~g~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd 188 (332)
.++++|||+||+|||++|+.+.|+|..|+.+|+.++|++||
T Consensus 118 ---------------------------------------~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~vd 158 (217)
T 2trc_P 118 ---------------------------------------QKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIR 158 (217)
T ss_dssp ---------------------------------------CTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred ---------------------------------------CCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEEE
Confidence 13478888999999999999999999999999999999999
Q ss_pred CcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhHhHHHHHHHHHHHcCCcc
Q psy6451 189 VERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCADFSTEMLEWRIAQAGVID 247 (332)
Q Consensus 189 ~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~~~g~l~ 247 (332)
++ ++.++.+|+|.++||+++|++|+.+.+++|+.+.++ .+|+.+.|+++|.++|+|+
T Consensus 159 ~~-~~~l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g-~~~~~~~Le~~L~~~g~l~ 215 (217)
T 2trc_P 159 AS-NTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFA-EDFFAADVESFLNEYGLLP 215 (217)
T ss_dssp HH-HHTCSTTSCGGGCSEEEEEETTEEEEEETTGGGGSC-SSCCHHHHHHHHHTTTCSC
T ss_pred CC-cHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccCc-ccCCHHHHHHHHHHcCCCC
Confidence 99 888999999999999999999999999999988776 5899999999999999984
No 4
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.94 E-value=2.9e-26 Score=186.80 Aligned_cols=112 Identities=25% Similarity=0.541 Sum_probs=101.6
Q ss_pred CCcccccCChhHHHHHhc-cCC--cEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEE
Q psy6451 131 HGEYEEIPDEKKFFDLCK-KSP--NMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTL 207 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~-~~~--~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl 207 (332)
+|.+.+++. ++|.+.+. +++ +|||+||||||++|+.|.|+|++||.+|++++|++||++.+ +++|+|+++||+
T Consensus 2 ~G~v~~it~-~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~---~~~~~v~~~PT~ 77 (118)
T 3evi_A 2 FGELREISG-NQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSC---IQHYHDNCLPTI 77 (118)
T ss_dssp CCSCEECCG-GGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGT---STTCCGGGCSEE
T ss_pred CcceEEeCH-HHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHh---HHHCCCCCCCEE
Confidence 678889954 56666554 444 89999999999999999999999999999999999999987 689999999999
Q ss_pred EEEeCCeeeeeEecccCcchhhHhHHHHHHHHHHHcCCcc
Q psy6451 208 TLVKDSVTKDYIVGFTELGNCADFSTEMLEWRIAQAGVID 247 (332)
Q Consensus 208 ~~~~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~~~g~l~ 247 (332)
++|++|+.+.+++|+.+.++. +|+.+.||++|.++|+|+
T Consensus 78 ~~fk~G~~v~~~~G~~~~gg~-~~~~~~le~~L~~~g~i~ 116 (118)
T 3evi_A 78 FVYKNGQIEAKFIGIIECGGI-NLKLEELEWKLAEVGAIQ 116 (118)
T ss_dssp EEEETTEEEEEEESTTTTTCS-SCCHHHHHHHHHTTTSCC
T ss_pred EEEECCEEEEEEeChhhhCCC-CCCHHHHHHHHHHcCCcC
Confidence 999999999999999999884 999999999999999984
No 5
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.93 E-value=4.3e-25 Score=197.02 Aligned_cols=156 Identities=10% Similarity=0.113 Sum_probs=122.7
Q ss_pred CCcEEEEEccC-CChhhhhhHHHHHHHHHhhhhceeeecccCC--C------------Ccccc-cCCC---Ccccc----
Q psy6451 80 SPNMVVHFYKD-GSVNCKILDEHMKTLCKKHLETRFIKLNVER--A------------PFLTG-QQGH---GEYEE---- 136 (332)
Q Consensus 80 ~~~vvVhFy~p-~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k--~------------pfl~~-k~g~---g~~~e---- 136 (332)
++.+||.||+| ||++|+.+.+.|.++|.....+.|+++|++. . |.+.- ..|. ..+.-
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~~ 101 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAG 101 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCCT
T ss_pred CCeEEEEEecCCCCchhHHHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccCcH
Confidence 45678999999 9999999999999999888889999999876 3 32221 1110 00100
Q ss_pred ------------------cCChhHHHHHhccCCcE-EEEEecCCChhhHHHHHHHHHHHHHcC-----CceEEEEECcCC
Q psy6451 137 ------------------IPDEKKFFDLCKKSPNM-VVHFYKDGSVNCKILDEHMKTLCKKHL-----ETRFIKLNVERA 192 (332)
Q Consensus 137 ------------------i~~e~~~~~~~~~~~~V-vV~Fya~wc~~Ck~l~~~l~~La~~~~-----~v~f~kVd~~~~ 192 (332)
..++..+......++++ +|.||+|||++|+.+.|.+++++..++ .+.|++||++..
T Consensus 102 ~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~ 181 (226)
T 1a8l_A 102 HEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY 181 (226)
T ss_dssp THHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC
T ss_pred HHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC
Confidence 11233344444455667 999999999999999999999999997 699999999999
Q ss_pred hHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhHhHHHH
Q psy6451 193 PFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCADFSTEM 235 (332)
Q Consensus 193 ~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~~ 235 (332)
+.++++|+|.++||+++|++|+.+.++.|..+...+..|+.+.
T Consensus 182 ~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 182 PEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp HHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHhCCCcccCeEEEEeCCceeEEEcCCCCHHHHHHHHHHh
Confidence 9999999999999999999999999999988776665555443
No 6
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.89 E-value=6.1e-23 Score=163.44 Aligned_cols=88 Identities=19% Similarity=0.405 Sum_probs=83.1
Q ss_pred cccCChhHHHHHhcc--CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEeC
Q psy6451 135 EEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 135 ~ei~~e~~~~~~~~~--~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~ 212 (332)
.+|.+.++|.+.+.. +++|||+||||||++|+.+.|.+++++..|+++.|++||+++++.++++|+|+++||+++|++
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~ 82 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIACMPTFLFMKN 82 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCBSSEEEEEET
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCCCeecEEEEEEC
Confidence 468888999998854 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeeEecc
Q psy6451 213 SVTKDYIVGF 222 (332)
Q Consensus 213 G~~v~~~~G~ 222 (332)
|+.+.++.|.
T Consensus 83 G~~v~~~~G~ 92 (105)
T 3zzx_A 83 GQKLDSLSGA 92 (105)
T ss_dssp TEEEEEEESC
T ss_pred CEEEEEEeCc
Confidence 9999999995
No 7
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.89 E-value=1.4e-22 Score=181.33 Aligned_cols=164 Identities=9% Similarity=0.029 Sum_probs=124.2
Q ss_pred hhhhhh--cCCCcEEEEEc-----cCCChhhhhhHHHHHHHHHhh---hhceeeecccCCCCcccccCCCCccc------
Q psy6451 72 KFFDLC--KKSPNMVVHFY-----KDGSVNCKILDEHMKTLCKKH---LETRFIKLNVERAPFLTGQQGHGEYE------ 135 (332)
Q Consensus 72 ~f~~~~--~~~~~vvVhFy-----~p~~~~Ck~~~~~l~~LA~~~---~~~~f~kvd~~k~pfl~~k~g~g~~~------ 135 (332)
.+.+++ +...+|+|.|| +|||++|+.+.+.|.++|..+ ..+.|+++|+...+-++.+.|...++
T Consensus 10 ~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~ 89 (229)
T 2ywm_A 10 QLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEG 89 (229)
T ss_dssp HHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEES
T ss_pred HHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEEC
Confidence 344444 33456777777 899999999999999998776 34889999987654333322221111
Q ss_pred -------------------------------ccCChhHHHHHhccCCcE-EEEEecCCChhhHHHHHHHHHHHHHcCCce
Q psy6451 136 -------------------------------EIPDEKKFFDLCKKSPNM-VVHFYKDGSVNCKILDEHMKTLCKKHLETR 183 (332)
Q Consensus 136 -------------------------------ei~~e~~~~~~~~~~~~V-vV~Fya~wc~~Ck~l~~~l~~La~~~~~v~ 183 (332)
..-++..|......++++ ||.||+|||++|+.+.|.++.++..++.+.
T Consensus 90 ~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~v~ 169 (229)
T 2ywm_A 90 DKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDYIT 169 (229)
T ss_dssp SSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEE
T ss_pred CCcccceecCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCCCeE
Confidence 111344555555555666 889999999999999999999999998899
Q ss_pred EEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhHhHHHHHHH
Q psy6451 184 FIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCADFSTEMLEW 238 (332)
Q Consensus 184 f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~~Le~ 238 (332)
|+.||++..+.++++|+|.++||+++ +|+ +.++.|..+...+..|+.+.+..
T Consensus 170 ~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~-~~~~~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 170 SKVIDASENQDLAEQFQVVGVPKIVI--NKG-VAEFVGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp EEEEEGGGCHHHHHHTTCCSSSEEEE--GGG-TEEEESCCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHcCCcccCEEEE--CCE-EEEeeCCCCHHHHHHHHHHHhhh
Confidence 99999999999999999999999998 888 67799988877776776665543
No 8
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.88 E-value=2e-22 Score=170.61 Aligned_cols=107 Identities=8% Similarity=0.045 Sum_probs=93.6
Q ss_pred ccccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEE
Q psy6451 134 YEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLV 210 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~ 210 (332)
++++.+..+|.+.+. ++++|||+|||+||+||+.|+|.|++||.+|++ +.|++||++++|++++.|+|.++||+++|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEE
Confidence 578999999988773 678999999999999999999999999999987 99999999999999999999999999999
Q ss_pred eCCeee--e-------eEecccC-cchhhHhHHHHHHHHH
Q psy6451 211 KDSVTK--D-------YIVGFTE-LGNCADFSTEMLEWRI 240 (332)
Q Consensus 211 ~~G~~v--~-------~~~G~~~-~~~~~~f~~~~Le~~L 240 (332)
++|+.+ . +++|..+ ...+.+++...+....
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~ 142 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGAR 142 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhh
Confidence 999998 5 8999866 6556566555554443
No 9
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.87 E-value=7e-22 Score=163.68 Aligned_cols=118 Identities=25% Similarity=0.515 Sum_probs=106.2
Q ss_pred ccCCCCcccccCChhHHHHHhccC---CcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCccc
Q psy6451 127 GQQGHGEYEEIPDEKKFFDLCKKS---PNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKV 203 (332)
Q Consensus 127 ~k~g~g~~~ei~~e~~~~~~~~~~---~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~ 203 (332)
...++|.+.++ +..+|.+.+... ++|||+||+|||++|+.+.|.|++++.+|+.++|++||++.++ ++|+|.+
T Consensus 5 ~~~~~g~v~~i-~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~---~~~~i~~ 80 (135)
T 2dbc_A 5 SSGKFGELREI-SGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCI---EHYHDNC 80 (135)
T ss_dssp CCCCCCSCEEC-CHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSC---SSCCSSC
T ss_pred ccCCCCceEEc-CHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCc---ccCCCCC
Confidence 45678899999 788888887542 6899999999999999999999999999999999999999885 7999999
Q ss_pred CcEEEEEeCCeeeeeEecccCcchhhHhHHHHHHHHHHHcCCcccc
Q psy6451 204 IPTLTLVKDSVTKDYIVGFTELGNCADFSTEMLEWRIAQAGVIDYE 249 (332)
Q Consensus 204 ~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~~~g~l~~~ 249 (332)
+||+++|++|+.+.++.|+.++++. ++..+.|+++|.++|++.+.
T Consensus 81 ~Pt~~~~~~G~~v~~~~G~~~~~~~-~~~~~~l~~~l~~~~~i~~~ 125 (135)
T 2dbc_A 81 LPTIFVYKNGQIEGKFIGIIECGGI-NLKLEELEWKLSEVGAIQSD 125 (135)
T ss_dssp CSEEEEESSSSCSEEEESTTTTTCT-TCCHHHHHHHHHHHTSSCCC
T ss_pred CCEEEEEECCEEEEEEEeEEeeCCC-cCCHHHHHHHHHHcCCcccc
Confidence 9999999999999999999888775 78889999999999999643
No 10
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.87 E-value=1e-21 Score=205.73 Aligned_cols=159 Identities=18% Similarity=0.204 Sum_probs=129.7
Q ss_pred cceEecCCchhhhhhhcC---CCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCC------------Ccc
Q psy6451 62 GEYEEIPDEKKFFDLCKK---SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERA------------PFL 125 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~---~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~------------pfl 125 (332)
..|.+|+ .++|.+++.. ...++|.||+|||++|+.+.+.|.++|..+.+ +.|+++|+... |.+
T Consensus 543 ~~v~~l~-~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pti 621 (780)
T 3apo_A 543 PSVVSLT-PSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRYPEI 621 (780)
T ss_dssp CSEEECC-HHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred cceeecC-cccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcchHHHHHHcCCCCCCeE
Confidence 5688886 5799998865 45689999999999999999999999999865 88898887652 221
Q ss_pred cc-cCC----------CC------------------cccccCChhHHHH-HhccCCcEEEEEecCCChhhHHHHHHHHHH
Q psy6451 126 TG-QQG----------HG------------------EYEEIPDEKKFFD-LCKKSPNMVVHFYKDGSVNCKILDEHMKTL 175 (332)
Q Consensus 126 ~~-k~g----------~g------------------~~~ei~~e~~~~~-~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~L 175 (332)
.- ..| .| .+.++ +..+|.+ ++..+++|||.||||||++|+.+.|.++++
T Consensus 622 ~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l-~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~l 700 (780)
T 3apo_A 622 RFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDL-TPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELL 700 (780)
T ss_dssp EEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEE-CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccC-CHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHH
Confidence 11 011 01 12222 3456655 446779999999999999999999999999
Q ss_pred HHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecc
Q psy6451 176 CKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGF 222 (332)
Q Consensus 176 a~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~ 222 (332)
+.++.+ +.|++||++..+.++++|+|.++||+++|++|+.+.++.|.
T Consensus 701 a~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~ 748 (780)
T 3apo_A 701 ARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEE 748 (780)
T ss_dssp HHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTTTEEEEE
T ss_pred HHHhcCCceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCccccccCc
Confidence 999965 99999999999999999999999999999999999999885
No 11
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.87 E-value=4.2e-22 Score=165.63 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=91.2
Q ss_pred cccccCChhHHHHHhccCC-cEEEEEecCCC--hhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 133 EYEEIPDEKKFFDLCKKSP-NMVVHFYKDGS--VNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~~~~~-~VvV~Fya~wc--~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
+++++++ .+|.+.+.++. +|||+|||+|| ++|+.+.|.|++|+.+|.+ ++|++||+++++.++.+|+|+++||++
T Consensus 16 g~~~vt~-~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 16 APTLVDE-ATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLA 94 (137)
T ss_dssp -CEEECT-TTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEE
T ss_pred CCcccCH-hHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 4556655 56777776655 99999999999 9999999999999999976 999999999999999999999999999
Q ss_pred EEeCCeeeeeEecccCcchhhHhHHHHH
Q psy6451 209 LVKDSVTKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 209 ~~~~G~~v~~~~G~~~~~~~~~f~~~~L 236 (332)
+|++|+.+.+++|+.+...+.+++.+.|
T Consensus 95 lFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 95 VVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999887777776655
No 12
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.86 E-value=2.2e-21 Score=176.56 Aligned_cols=161 Identities=12% Similarity=0.138 Sum_probs=117.9
Q ss_pred chhhhhhhcC-CCcEEEEEccCC--ChhhhhhHHHHHHHHHhhhh------ceeeecccCCC------------Cccccc
Q psy6451 70 EKKFFDLCKK-SPNMVVHFYKDG--SVNCKILDEHMKTLCKKHLE------TRFIKLNVERA------------PFLTGQ 128 (332)
Q Consensus 70 e~~f~~~~~~-~~~vvVhFy~p~--~~~Ck~~~~~l~~LA~~~~~------~~f~kvd~~k~------------pfl~~k 128 (332)
.+.|.++..+ ..+|+|+||++| |++|+.+.+.+.++|..+.. +.|+++|++.. |.+.-.
T Consensus 14 ~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~ 93 (243)
T 2hls_A 14 RRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL 93 (243)
T ss_dssp HHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE
Confidence 3455555543 468999999999 99999999999999999765 88999887554 332221
Q ss_pred CCCCcccccCC---------------------hhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHc-----C
Q psy6451 129 QGHGEYEEIPD---------------------EKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-----L 180 (332)
Q Consensus 129 ~g~g~~~ei~~---------------------e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~-----~ 180 (332)
.|...|.-... ..+..+.+. .++.+|+.||+|||++|+.+.|.|++++..+ +
T Consensus 94 ~g~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~ 173 (243)
T 2hls_A 94 GGEVRWTGIPAGEEIRALVEVIMRLSEDESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNP 173 (243)
T ss_dssp TTTEEEESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCceeEcCCCcHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCC
Confidence 11001111111 111222222 2456789999999999999999999999998 6
Q ss_pred CceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhHhHHH
Q psy6451 181 ETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 181 ~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
++.+..||++..+.++++|+|.++||+++ +|+.+ +.|..+...+..++.+
T Consensus 174 ~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~~--~~G~~~~~~l~~~l~~ 223 (243)
T 2hls_A 174 VILSEAVEAYENPDIADKYGVMSVPSIAI--NGYLV--FVGVPYEEDFLDYVKS 223 (243)
T ss_dssp CEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE--EESCCCHHHHHHHHHH
T ss_pred cEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEEE--EeCCCCHHHHHHHHHH
Confidence 79999999999999999999999999988 99865 7887766555444443
No 13
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.85 E-value=1.7e-21 Score=162.52 Aligned_cols=98 Identities=11% Similarity=0.153 Sum_probs=88.1
Q ss_pred ChhHHHHHhccCCcEEEEEecCC--ChhhHHHHHHHHHHHHHcCC--ceEEEEECcCChHHHHhCCcccCcEEEEEeCCe
Q psy6451 139 DEKKFFDLCKKSPNMVVHFYKDG--SVNCKILDEHMKTLCKKHLE--TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSV 214 (332)
Q Consensus 139 ~e~~~~~~~~~~~~VvV~Fya~w--c~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~ 214 (332)
++.+|.+.+.++++|||+||++| |++|+.+.|.|++|+.+|.+ ++|++||+++++.++.+|+|+++||+++|++|+
T Consensus 23 t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G~ 102 (140)
T 2qgv_A 23 SESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGN 102 (140)
T ss_dssp CHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEEEETTE
T ss_pred CHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEEEECCE
Confidence 45678888888889999999999 99999999999999999975 899999999999999999999999999999999
Q ss_pred eeeeEecccCcchhhHhHHHHH
Q psy6451 215 TKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 215 ~v~~~~G~~~~~~~~~f~~~~L 236 (332)
.+.+++|+.+...+..++.+.|
T Consensus 103 ~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 103 YRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp EEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEecCCCHHHHHHHHHHHh
Confidence 9999999988776655554443
No 14
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.85 E-value=9e-22 Score=154.99 Aligned_cols=100 Identities=9% Similarity=0.074 Sum_probs=75.4
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEeCC
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVKDS 213 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G 213 (332)
+.++++.++|.+.+++++++||+||+|||++|+.+.|.+++++..|+++.|++||++.++.++++|+|.++||+++|++|
T Consensus 2 m~~i~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 81 (105)
T 4euy_A 2 MNTFKTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNG 81 (105)
T ss_dssp --------CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC---------CCCCEEEEEETT
T ss_pred ccccCCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCCCCCEEEEEeCC
Confidence 34566677777778889999999999999999999999999999998899999999999999999999999999999999
Q ss_pred eeeeeEecccCcchhhHhHH
Q psy6451 214 VTKDYIVGFTELGNCADFST 233 (332)
Q Consensus 214 ~~v~~~~G~~~~~~~~~f~~ 233 (332)
+.+.++.|..+...+.+++.
T Consensus 82 ~~~~~~~g~~~~~~l~~~l~ 101 (105)
T 4euy_A 82 KEILRESRFISLENLERTIQ 101 (105)
T ss_dssp EEEEEEESSCCHHHHHHHHH
T ss_pred eEEEEEeCCcCHHHHHHHHH
Confidence 99999999887665544443
No 15
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.84 E-value=1.4e-20 Score=151.33 Aligned_cols=102 Identities=17% Similarity=0.248 Sum_probs=91.0
Q ss_pred CCCcccccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEE
Q psy6451 130 GHGEYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTL 207 (332)
Q Consensus 130 g~g~~~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl 207 (332)
+.+...+..+.++|.+.+. +++++||+||++||++|+.+.|.|++++.+|+++.|++||++.++.++++|+|.++||+
T Consensus 9 ~~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 9 HHGSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp ---CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred cCCcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCccccEE
Confidence 4566778889999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCeeeeeEecccCcchhhHhH
Q psy6451 208 TLVKDSVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 208 ~~~~~G~~v~~~~G~~~~~~~~~f~ 232 (332)
++|++|+.+.++.|. ....+..++
T Consensus 89 ~~~~~G~~~~~~~G~-~~~~l~~~l 112 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-NKEKLEATI 112 (116)
T ss_dssp EEESSSSEEEEEESC-CHHHHHHHH
T ss_pred EEEeCCeEEEEEcCC-CHHHHHHHH
Confidence 999999999999997 555444444
No 16
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.84 E-value=3.1e-20 Score=147.53 Aligned_cols=95 Identities=20% Similarity=0.336 Sum_probs=89.7
Q ss_pred CCCCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 129 QGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 129 ~g~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
.+++......+..+|.+.+.+++++||+||++||++|+.+.|.|++++.+++++.|+.||++..+.++++|+|.++||++
T Consensus 3 ~~~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 82 (109)
T 3f3q_A 3 HHHHMVTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLL 82 (109)
T ss_dssp CSCCCCEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cccccccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 35666777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCeeeeeEeccc
Q psy6451 209 LVKDSVTKDYIVGFT 223 (332)
Q Consensus 209 ~~~~G~~v~~~~G~~ 223 (332)
+|++|+.+.++.|..
T Consensus 83 ~~~~G~~~~~~~G~~ 97 (109)
T 3f3q_A 83 LFKNGKEVAKVVGAN 97 (109)
T ss_dssp EEETTEEEEEEESSC
T ss_pred EEECCEEEEEEeCCC
Confidence 999999999999973
No 17
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.84 E-value=3.4e-20 Score=146.04 Aligned_cols=91 Identities=18% Similarity=0.250 Sum_probs=85.0
Q ss_pred ccccCChhHHHHHh--ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIPDEKKFFDLC--KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~~e~~~~~~~--~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.++.+.++|.+.+ .+++++||+||+|||++|+.+.|.|++++++++++.|++||++.++.++++|+|.++||+++|+
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 82 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFQFFR 82 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCCcccEEEEEE
Confidence 56788888999988 5789999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCeeeeeEecccC
Q psy6451 212 DSVTKDYIVGFTE 224 (332)
Q Consensus 212 ~G~~v~~~~G~~~ 224 (332)
+|+.+.++.|...
T Consensus 83 ~G~~~~~~~G~~~ 95 (107)
T 1gh2_A 83 NKVRIDQYQGADA 95 (107)
T ss_dssp TTEEEEEEESSCH
T ss_pred CCeEEEEEeCCCH
Confidence 9999999999643
No 18
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.83 E-value=4e-20 Score=176.47 Aligned_cols=163 Identities=17% Similarity=0.171 Sum_probs=124.5
Q ss_pred CcceEecCCchhhhhhhcCC-CcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccC--C--------------C
Q psy6451 61 HGEYEEIPDEKKFFDLCKKS-PNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE--R--------------A 122 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~-~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~--k--------------~ 122 (332)
.+.+.+++ +++|..+.... +.++|.||++||++|+.+.+.|.++|..|.+ +.|+.+|+. . .
T Consensus 116 ~p~v~~~~-~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~ 194 (361)
T 3uem_A 116 LPLVIEFT-EQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEEC 194 (361)
T ss_dssp SCSEEECS-TTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTC
T ss_pred CCcceecC-cccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCC
Confidence 56788885 56777777654 4578999999999999999999999999975 788988887 2 1
Q ss_pred Ccccc-cC-C-CCc------------------------------------------ccccCChhHHHHHh-ccCCcEEEE
Q psy6451 123 PFLTG-QQ-G-HGE------------------------------------------YEEIPDEKKFFDLC-KKSPNMVVH 156 (332)
Q Consensus 123 pfl~~-k~-g-~g~------------------------------------------~~ei~~e~~~~~~~-~~~~~VvV~ 156 (332)
|.+.- .. + ... +..+ +.+.|.+.+ .++++++|.
T Consensus 195 P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l-~~~~f~~~~~~~~k~~lv~ 273 (361)
T 3uem_A 195 PAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVL-VGKNFEDVAFDEKKNVFVE 273 (361)
T ss_dssp SEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEE-CTTTHHHHHTCTTCEEEEE
T ss_pred ccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEe-ecCchhhhcccCCCcEEEE
Confidence 21111 00 0 000 1112 234555555 578999999
Q ss_pred EecCCChhhHHHHHHHHHHHHHcCC---ceEEEEECcCChHHHHhCCcccCcEEEEEeCC--eeeeeEecccCcch
Q psy6451 157 FYKDGSVNCKILDEHMKTLCKKHLE---TRFIKLNVERAPFLTERLRIKVIPTLTLVKDS--VTKDYIVGFTELGN 227 (332)
Q Consensus 157 Fya~wc~~Ck~l~~~l~~La~~~~~---v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G--~~v~~~~G~~~~~~ 227 (332)
||||||++|+.+.|.|++++..+.+ +.|++||++.++ +++|+|.++||+++|.+| +.+.++.|......
T Consensus 274 f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~ 347 (361)
T 3uem_A 274 FYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPASADRTVIDYNGERTLDG 347 (361)
T ss_dssp EECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSSSSCCCEECCSCSSHHH
T ss_pred EecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECCCCcceeEecCCCCHHH
Confidence 9999999999999999999999875 899999999887 789999999999999654 66778888655443
No 19
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.83 E-value=6.8e-20 Score=143.14 Aligned_cols=99 Identities=16% Similarity=0.255 Sum_probs=89.7
Q ss_pred ccccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.++.+.++|.+.+. +++++||+||++||++|+.+.|.+++++.+|+++.|+.||++..+.+++.|+|.++||+++|+
T Consensus 2 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 81 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPTFQFFK 81 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCCBSSEEEEEE
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCCcCcEEEEEE
Confidence 357888899999987 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeeEecccCcchhhHhHH
Q psy6451 212 DSVTKDYIVGFTELGNCADFST 233 (332)
Q Consensus 212 ~G~~v~~~~G~~~~~~~~~f~~ 233 (332)
+|+.+.++.|. +...+..++.
T Consensus 82 ~g~~~~~~~g~-~~~~l~~~l~ 102 (105)
T 3m9j_A 82 KGQKVGEFSGA-NKEKLEATIN 102 (105)
T ss_dssp TTEEEEEEESS-CHHHHHHHHH
T ss_pred CCeEEEEEeCC-CHHHHHHHHH
Confidence 99999999998 5555444443
No 20
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.83 E-value=4.5e-20 Score=148.15 Aligned_cols=95 Identities=23% Similarity=0.453 Sum_probs=90.9
Q ss_pred CCCCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 129 QGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 129 ~g~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
.|+|.+.++++.++|.+.+++++++||.||++||++|+.+.|.|++++.+++++.|++||++..+.++++|+|.++||++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 88 (114)
T 2oe3_A 9 SSYTSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFV 88 (114)
T ss_dssp CCGGGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred cchhheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCcccEEE
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCeeeeeEeccc
Q psy6451 209 LVKDSVTKDYIVGFT 223 (332)
Q Consensus 209 ~~~~G~~v~~~~G~~ 223 (332)
+|++|+.+.++.|..
T Consensus 89 ~~~~G~~~~~~~G~~ 103 (114)
T 2oe3_A 89 LGKDGQLIGKIIGAN 103 (114)
T ss_dssp EEETTEEEEEEESSC
T ss_pred EEeCCeEEEEEeCCC
Confidence 999999999999975
No 21
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.83 E-value=9.1e-20 Score=190.87 Aligned_cols=170 Identities=11% Similarity=0.104 Sum_probs=132.1
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCC-------
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHG------- 132 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g------- 132 (332)
.+.+.+++ .++|.+. .+.+++|+||+|||++|+.+.|.|.++|..+. .+.|+.+|+...+.++...|..
T Consensus 439 ~~~v~~l~-~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 515 (780)
T 3apo_A 439 NSHVTTLG-PQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVV 515 (780)
T ss_dssp TSCEEECC-TTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCCCEecC-HHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEE
Confidence 56788886 4577766 67899999999999999999999999999984 5889999987643332222211
Q ss_pred ----------------------------cccccCChhHHHHHhcc---CCcEEEEEecCCChhhHHHHHHHHHHHHHcCC
Q psy6451 133 ----------------------------EYEEIPDEKKFFDLCKK---SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE 181 (332)
Q Consensus 133 ----------------------------~~~ei~~e~~~~~~~~~---~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~ 181 (332)
.+.+++ .++|.+.+.. +..++|.||+|||++|+.+.|.|+++|..+.+
T Consensus 516 ~~~g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~-~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~ 594 (780)
T 3apo_A 516 FNQSSIHEYEGHHSAEQILEFIEDLRNPSVVSLT-PSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG 594 (780)
T ss_dssp EETTEEEEECSCSCHHHHHHHHHHHHSCSEEECC-HHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred EcCCceeeecCcccHHHHHHHHHhhcccceeecC-cccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC
Confidence 122333 4567776654 57789999999999999999999999999976
Q ss_pred -ceEEEEECcCChHHHHhCCcccCcEEEEEeCCee----eeeEec-ccCcchhhHhHHH
Q psy6451 182 -TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVT----KDYIVG-FTELGNCADFSTE 234 (332)
Q Consensus 182 -v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~----v~~~~G-~~~~~~~~~f~~~ 234 (332)
+.|++||++.+..+|+.|+|.++||+++|+.|.. ...+.| ......+..|+.+
T Consensus 595 ~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~ 653 (780)
T 3apo_A 595 LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLG 653 (780)
T ss_dssp TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHT
T ss_pred CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhh
Confidence 9999999999999999999999999999988753 234556 4454455455443
No 22
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.82 E-value=2e-19 Score=141.82 Aligned_cols=102 Identities=22% Similarity=0.319 Sum_probs=91.0
Q ss_pred ccccCChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.++ +.++|.+.+ .+++++||+||++||++|+.+.|.+++++..+++ +.|++||++.++.++++|+|.++||+++|+
T Consensus 6 v~~l-~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 84 (111)
T 3gnj_A 6 LEKL-DTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYFK 84 (111)
T ss_dssp SEEC-CHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEE
T ss_pred ceec-CHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEEE
Confidence 4455 567888888 7889999999999999999999999999999996 999999999999999999999999999999
Q ss_pred CCeeeeeEecccCcchhhHhHHHHH
Q psy6451 212 DSVTKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 212 ~G~~v~~~~G~~~~~~~~~f~~~~L 236 (332)
+|+.+.++.|..+...+..|+.+.+
T Consensus 85 ~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 85 DGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeccCCHHHHHHHHHHHh
Confidence 9999999999877766666655544
No 23
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.82 E-value=7.2e-20 Score=154.29 Aligned_cols=113 Identities=14% Similarity=0.228 Sum_probs=97.4
Q ss_pred ccccCChhHHHHHh--ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEE
Q psy6451 134 YEEIPDEKKFFDLC--KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLV 210 (332)
Q Consensus 134 ~~ei~~e~~~~~~~--~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~ 210 (332)
++.+.+.++|.+.+ .++++|||+||||||++|+.+.|.|++++.+|++ +.|++||++..+.++++|+|.++||+++|
T Consensus 5 l~~i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~ 84 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFF 84 (149)
T ss_dssp CCEECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred eeecCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEE
Confidence 56777888999888 4589999999999999999999999999999988 99999999999999999999999999999
Q ss_pred eCCeee---------eeEec-ccCcchhhHhHHHHHHHHHHHcCCc
Q psy6451 211 KDSVTK---------DYIVG-FTELGNCADFSTEMLEWRIAQAGVI 246 (332)
Q Consensus 211 ~~G~~v---------~~~~G-~~~~~~~~~f~~~~Le~~L~~~g~l 246 (332)
++|+.+ .++.| +.+...+.+++...+.....-.|++
T Consensus 85 ~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~~~g~~~~ 130 (149)
T 3gix_A 85 FNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLIV 130 (149)
T ss_dssp ETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHHHTTCSEE
T ss_pred ECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHhhcCCceE
Confidence 999999 99999 7777777666666655443333333
No 24
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.82 E-value=4.4e-20 Score=184.06 Aligned_cols=82 Identities=20% Similarity=0.248 Sum_probs=69.1
Q ss_pred ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcC----CceEEEEECcCChHHHHhCCcccCcEEEEEeCCee--eeeEec
Q psy6451 148 KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL----ETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVT--KDYIVG 221 (332)
Q Consensus 148 ~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~----~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~--v~~~~G 221 (332)
..+++|||+||||||++|+.+.|.|++++..+. .+.|++||++.++.. . |+|.++||+++|++|+. +.++.|
T Consensus 374 ~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~G 451 (504)
T 2b5e_A 374 DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQG 451 (504)
T ss_dssp CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCCS
T ss_pred cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceecCeEEEEeCCceecceEecC
Confidence 346899999999999999999999999999886 599999999987644 3 99999999999999987 677788
Q ss_pred ccCcchhhHh
Q psy6451 222 FTELGNCADF 231 (332)
Q Consensus 222 ~~~~~~~~~f 231 (332)
..+...+..|
T Consensus 452 ~~~~~~l~~~ 461 (504)
T 2b5e_A 452 SRSLDSLFDF 461 (504)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 6655444333
No 25
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.81 E-value=2.2e-19 Score=142.34 Aligned_cols=91 Identities=16% Similarity=0.334 Sum_probs=82.0
Q ss_pred ccccCChhHHHHHhcc---CCcEEEEEecCCChhhHHHHHHHHHHHHH--cCCceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 134 YEEIPDEKKFFDLCKK---SPNMVVHFYKDGSVNCKILDEHMKTLCKK--HLETRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~---~~~VvV~Fya~wc~~Ck~l~~~l~~La~~--~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
+.++++.++|.+.+.+ ++++||+||++||++|+.+.|.|++++.+ ++++.|++||++..+.++++|+|.++||++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 4567787889998876 89999999999999999999999999998 677999999999999999999999999999
Q ss_pred EEeCCeeeeeEecccC
Q psy6451 209 LVKDSVTKDYIVGFTE 224 (332)
Q Consensus 209 ~~~~G~~v~~~~G~~~ 224 (332)
+|++|+.+.++.|...
T Consensus 82 ~~~~G~~~~~~~G~~~ 97 (112)
T 3d6i_A 82 IIHKGTILKELSGADP 97 (112)
T ss_dssp EEETTEEEEEECSCCH
T ss_pred EEECCEEEEEecCCCH
Confidence 9999999999999743
No 26
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.81 E-value=2.1e-19 Score=142.19 Aligned_cols=101 Identities=23% Similarity=0.323 Sum_probs=90.0
Q ss_pred CcccccCChhHHHHHhcc----CCcEEEEEecCCChhhHHHHHHHHHHHHHcC-CceEEEEECcCChHHHHhCCcccCcE
Q psy6451 132 GEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTERLRIKVIPT 206 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~----~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~-~v~f~kVd~~~~~~l~~~~~I~~~PT 206 (332)
+.+.++++.++|.+.+.. ++++||+||++||++|+.+.|.|++++..++ ++.|+.||++..+.+++.|+|.++||
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 81 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPT 81 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSE
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccE
Confidence 457788888999998875 8999999999999999999999999999998 59999999999999999999999999
Q ss_pred EEEEeCCeeeeeEecccCcchhhHhHH
Q psy6451 207 LTLVKDSVTKDYIVGFTELGNCADFST 233 (332)
Q Consensus 207 l~~~~~G~~v~~~~G~~~~~~~~~f~~ 233 (332)
+++|++|+.+.++.|. ....+..++.
T Consensus 82 ~~~~~~G~~~~~~~G~-~~~~l~~~l~ 107 (112)
T 1ep7_A 82 FHVYKDGVKADDLVGA-SQDKLKALVA 107 (112)
T ss_dssp EEEEETTEEEEEEESC-CHHHHHHHHH
T ss_pred EEEEECCeEEEEEcCC-CHHHHHHHHH
Confidence 9999999999999997 5444444443
No 27
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.81 E-value=4.1e-19 Score=150.53 Aligned_cols=105 Identities=16% Similarity=0.254 Sum_probs=91.8
Q ss_pred CCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEE
Q psy6451 131 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTL 209 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~ 209 (332)
.|.+.+++ ..+|.+.+.+++++||+||++||++|+.+.|.|++++++|.+ +.|++||++.++.++.+|+|.++||+++
T Consensus 46 ~~~~~~l~-~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 124 (155)
T 2ppt_A 46 TGKVAGID-PAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFIL 124 (155)
T ss_dssp CSSEEECC-HHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEE
T ss_pred CCCCccCC-HHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEE
Confidence 34556665 678888887889999999999999999999999999999984 9999999999999999999999999999
Q ss_pred EeCCeeeeeEecccCcchhhHhHHHHH
Q psy6451 210 VKDSVTKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 210 ~~~G~~v~~~~G~~~~~~~~~f~~~~L 236 (332)
|++|+.+.++.|..+...+..|+.+.+
T Consensus 125 ~~~G~~~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 125 FHKGRELARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EeCCeEEEEecCCCCHHHHHHHHHHHh
Confidence 999999999999877766656655443
No 28
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.81 E-value=3.6e-19 Score=145.44 Aligned_cols=98 Identities=13% Similarity=0.241 Sum_probs=88.3
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEeCC
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVKDS 213 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G 213 (332)
+.++++.++|.+.+.+++++||+||++||++|+.+.|.|++++..++++.|++||++..+.+++.|+|.++||+++|++|
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~~G 100 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQLPTFIIARSG 100 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCcccEEEEEeCC
Confidence 67788878999999899999999999999999999999999999998899999999999999999999999999999999
Q ss_pred eeeeeEecccCcchhhHhH
Q psy6451 214 VTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 214 ~~v~~~~G~~~~~~~~~f~ 232 (332)
+.+.++.|. ....+..++
T Consensus 101 ~~~~~~~G~-~~~~l~~~l 118 (125)
T 1r26_A 101 KMLGHVIGA-NPGMLRQKL 118 (125)
T ss_dssp EEEEEEESS-CHHHHHHHH
T ss_pred eEEEEEeCC-CHHHHHHHH
Confidence 999999994 333333333
No 29
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.80 E-value=2.5e-19 Score=142.51 Aligned_cols=102 Identities=19% Similarity=0.324 Sum_probs=89.8
Q ss_pred CCCCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 129 QGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 129 ~g~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
.+++......+..+|.+.+++++++||+||++||++|+.+.|.|++++.+++++.|+.||++..+.++++|+|.++||++
T Consensus 5 ~~~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 84 (112)
T 1syr_A 5 HHHHMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENITSMPTFK 84 (112)
T ss_dssp ----CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred ccceeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 34566777888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCeeeeeEecccCcchhhHh
Q psy6451 209 LVKDSVTKDYIVGFTELGNCADF 231 (332)
Q Consensus 209 ~~~~G~~v~~~~G~~~~~~~~~f 231 (332)
+|++|+.+.++.|. +...+..+
T Consensus 85 ~~~~G~~~~~~~G~-~~~~l~~~ 106 (112)
T 1syr_A 85 VYKNGSSVDTLLGA-NDSALKQL 106 (112)
T ss_dssp EEETTEEEEEEESC-CHHHHHHH
T ss_pred EEECCcEEEEEeCC-CHHHHHHH
Confidence 99999999999997 54444333
No 30
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.80 E-value=3.7e-19 Score=139.47 Aligned_cols=98 Identities=16% Similarity=0.278 Sum_probs=88.0
Q ss_pred CChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeee
Q psy6451 138 PDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 138 ~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v 216 (332)
.+.++|.+.+.+++++||+||++||++|+.+.|.+.+++..+++ +.|+.||++..+.++++|+|.++||+++|++|+.+
T Consensus 9 l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~ 88 (109)
T 3tco_A 9 LTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFVNGQLV 88 (109)
T ss_dssp CCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred ecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEEcCCcEE
Confidence 34567888888899999999999999999999999999999985 99999999999999999999999999999999999
Q ss_pred eeEecccCcchhhHhHHHH
Q psy6451 217 DYIVGFTELGNCADFSTEM 235 (332)
Q Consensus 217 ~~~~G~~~~~~~~~f~~~~ 235 (332)
.++.|..+...+..++.+.
T Consensus 89 ~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 89 DSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp EEEESCCCHHHHHHHHHHH
T ss_pred EeeeccCCHHHHHHHHHHH
Confidence 9999987766665555443
No 31
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.80 E-value=2.8e-19 Score=147.94 Aligned_cols=85 Identities=21% Similarity=0.364 Sum_probs=75.9
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhH
Q psy6451 152 NMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCAD 230 (332)
Q Consensus 152 ~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~ 230 (332)
.+||+||++||++|+.+.|.|+.++.+|++ +.|++||++.++.++++|+|.++||+++|++|+.+.++.|..+...+..
T Consensus 52 ~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~ 131 (140)
T 1v98_A 52 LTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEE 131 (140)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHH
Confidence 388999999999999999999999999984 9999999999999999999999999999999999999999877666656
Q ss_pred hHHHHH
Q psy6451 231 FSTEML 236 (332)
Q Consensus 231 f~~~~L 236 (332)
|+.+.|
T Consensus 132 ~i~~~l 137 (140)
T 1v98_A 132 RLRPYL 137 (140)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 32
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.80 E-value=6.8e-19 Score=136.97 Aligned_cols=96 Identities=19% Similarity=0.325 Sum_probs=86.3
Q ss_pred cccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEeC
Q psy6451 135 EEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 135 ~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~ 212 (332)
.++++.++|.+.+. +++++||.||++||++|+.+.|.|.+++..++++.|+.||++..+.+++.|+|.++||+++|++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKD 81 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCccccEEEEEeC
Confidence 56778888999887 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeeEecccCcchhhHh
Q psy6451 213 SVTKDYIVGFTELGNCADF 231 (332)
Q Consensus 213 G~~v~~~~G~~~~~~~~~f 231 (332)
|+.+.++.|. ....+..+
T Consensus 82 g~~~~~~~G~-~~~~l~~~ 99 (104)
T 2vim_A 82 GKEVDRFSGA-NETKLRET 99 (104)
T ss_dssp TEEEEEEESS-CHHHHHHH
T ss_pred CcEEEEEeCC-CHHHHHHH
Confidence 9999999994 44333333
No 33
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.80 E-value=5.3e-19 Score=143.95 Aligned_cols=94 Identities=19% Similarity=0.315 Sum_probs=87.4
Q ss_pred CCCCcccccCChhHHHHHhcc----CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccC
Q psy6451 129 QGHGEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVI 204 (332)
Q Consensus 129 ~g~g~~~ei~~e~~~~~~~~~----~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~ 204 (332)
...+.+.++.+.++|.+.+.. ++++||+||++||++|+.+.|.|++++.+++++.|+.||++..+.++++|+|.++
T Consensus 13 ~~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 13 SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CCCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCCSS
T ss_pred cCCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCCcc
Confidence 345678899999999888864 8999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEeCCeeeeeEecc
Q psy6451 205 PTLTLVKDSVTKDYIVGF 222 (332)
Q Consensus 205 PTl~~~~~G~~v~~~~G~ 222 (332)
||+++|++|+.+.++.|.
T Consensus 93 Pt~~~~~~G~~~~~~~G~ 110 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVGA 110 (124)
T ss_dssp SEEEEEETTEEEEEEESC
T ss_pred CEEEEEECCEEEEEEeCC
Confidence 999999999999999995
No 34
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.80 E-value=5.6e-19 Score=141.40 Aligned_cols=89 Identities=24% Similarity=0.393 Sum_probs=84.0
Q ss_pred cccccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEE
Q psy6451 133 EYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLV 210 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~ 210 (332)
.+.++++.++|.+.+. +++++||+||++||++|+.+.|.|++++.++ ++.|++||++..+.++++|+|.++||+++|
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 92 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNISAMPTFIAI 92 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCCCccceEEEE
Confidence 4778888889998887 7899999999999999999999999999999 999999999999999999999999999999
Q ss_pred eCCeeeeeEecc
Q psy6451 211 KDSVTKDYIVGF 222 (332)
Q Consensus 211 ~~G~~v~~~~G~ 222 (332)
++|+.+.++.|.
T Consensus 93 ~~G~~~~~~~G~ 104 (117)
T 2xc2_A 93 KNGEKVGDVVGA 104 (117)
T ss_dssp ETTEEEEEEESS
T ss_pred eCCcEEEEEeCC
Confidence 999999999994
No 35
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.80 E-value=3.5e-19 Score=143.99 Aligned_cols=104 Identities=16% Similarity=0.312 Sum_probs=94.3
Q ss_pred cCCCCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCChHHHHhCCcccCc
Q psy6451 128 QQGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERAPFLTERLRIKVIP 205 (332)
Q Consensus 128 k~g~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~~~l~~~~~I~~~P 205 (332)
..|.+.+.++++.++|.+.+.+++++||.||++||++|+.+.|.|++++..+++ +.|+.||++..+.+++.|+|.++|
T Consensus 11 ~~~~~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~P 90 (121)
T 2j23_A 11 LVPRGSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMP 90 (121)
T ss_dssp CCCCCCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSS
T ss_pred ccCCcceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCccc
Confidence 456788999999999999998899999999999999999999999999999887 999999999999999999999999
Q ss_pred EEEEEeCCeeeeeEecccCcchhhHhH
Q psy6451 206 TLTLVKDSVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 206 Tl~~~~~G~~v~~~~G~~~~~~~~~f~ 232 (332)
|+++|++|+.+.++.|. ....+..|+
T Consensus 91 t~~~~~~G~~~~~~~G~-~~~~l~~~l 116 (121)
T 2j23_A 91 TFVFFKNGQKIDTVVGA-DPSKLQAAI 116 (121)
T ss_dssp EEEEEETTEEEEEEESS-CHHHHHHHH
T ss_pred EEEEEECCeEEeeEcCC-CHHHHHHHH
Confidence 99999999999999997 544443433
No 36
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.79 E-value=9.9e-19 Score=140.67 Aligned_cols=100 Identities=19% Similarity=0.303 Sum_probs=88.4
Q ss_pred CcccccCChhHHHHHhc----cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEE
Q psy6451 132 GEYEEIPDEKKFFDLCK----KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTL 207 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~----~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl 207 (332)
..+..+.+.++|...+. +++++||+||++||++|+.+.|.|++++.+|+++.|++||++..+.++++|+|.++||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCCcccEE
Confidence 44567778888888875 48999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCeeeeeEecccCcchhhHhH
Q psy6451 208 TLVKDSVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 208 ~~~~~G~~v~~~~G~~~~~~~~~f~ 232 (332)
++|++|+.+.++.|.. ...+..|+
T Consensus 92 ~~~~~G~~~~~~~G~~-~~~l~~~l 115 (122)
T 2vlu_A 92 LFMKEGDVKDRVVGAI-KEELTAKV 115 (122)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHH
T ss_pred EEEeCCEEEEEEeCcC-HHHHHHHH
Confidence 9999999999999976 44444443
No 37
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.79 E-value=1.2e-18 Score=138.74 Aligned_cols=93 Identities=18% Similarity=0.316 Sum_probs=86.9
Q ss_pred CCCcccccCChhHHHHHhcc----CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCc
Q psy6451 130 GHGEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIP 205 (332)
Q Consensus 130 g~g~~~ei~~e~~~~~~~~~----~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~P 205 (332)
+.+.+.++.+.++|.+.+.. ++++||.||++||++|+.+.|.|++++.+|+++.|+.||++..+.+++.|+|.++|
T Consensus 4 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 83 (118)
T 2vm1_A 4 EEGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVEAMP 83 (118)
T ss_dssp -CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSBS
T ss_pred CCCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCCcCc
Confidence 45678899999999988865 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCeeeeeEecc
Q psy6451 206 TLTLVKDSVTKDYIVGF 222 (332)
Q Consensus 206 Tl~~~~~G~~v~~~~G~ 222 (332)
|+++|++|+.+.++.|.
T Consensus 84 t~~~~~~g~~~~~~~g~ 100 (118)
T 2vm1_A 84 TFLFIKDGEKVDSVVGG 100 (118)
T ss_dssp EEEEEETTEEEEEEESC
T ss_pred EEEEEeCCeEEEEecCC
Confidence 99999999999999995
No 38
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.79 E-value=9.6e-19 Score=138.47 Aligned_cols=102 Identities=17% Similarity=0.281 Sum_probs=86.3
Q ss_pred cccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 133 EYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
.+.+++++.....++++++++||.||++||++|+.+.|.|.+++..+++ +.|+.||++..+.++++|+|.++||+++|+
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 85 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQ 85 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEEe
Confidence 3455665543344556789999999999999999999999999999965 999999999999999999999999999999
Q ss_pred CCeeeeeEecccCcchhhHhHHH
Q psy6451 212 DSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 212 ~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
+|+.+.++.|..+...+..++.+
T Consensus 86 ~G~~~~~~~G~~~~~~l~~~l~~ 108 (112)
T 1t00_A 86 GGEVAKTIVGAKPKAAIVRDLED 108 (112)
T ss_dssp TTEEEEEEESCCCHHHHHHHTHH
T ss_pred CCEEEEEEeCCCCHHHHHHHHHH
Confidence 99999999998776555555443
No 39
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.79 E-value=1.9e-18 Score=139.17 Aligned_cols=106 Identities=20% Similarity=0.294 Sum_probs=92.3
Q ss_pred CCCCcccccCChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcE
Q psy6451 129 QGHGEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPT 206 (332)
Q Consensus 129 ~g~g~~~ei~~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PT 206 (332)
.++|......+.++|.+.+ .+++++||.||++||++|+.+.|.|.+++.++.+ +.|+.||++.++.++++|+|.++||
T Consensus 9 ~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 88 (119)
T 1w4v_A 9 HHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPT 88 (119)
T ss_dssp -CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred cCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccE
Confidence 4567777888888898865 6678999999999999999999999999999865 9999999999999999999999999
Q ss_pred EEEEeCCeeeeeEecccCcchhhHhHHH
Q psy6451 207 LTLVKDSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 207 l~~~~~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
+++|++|+.+.++.|..+...+..|+.+
T Consensus 89 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 116 (119)
T 1w4v_A 89 VLAMKNGDVVDKFVGIKDEDQLEAFLKK 116 (119)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCCCHHHHHHHHHH
Confidence 9999999999999998776555555443
No 40
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.79 E-value=1.3e-18 Score=136.66 Aligned_cols=100 Identities=22% Similarity=0.345 Sum_probs=85.4
Q ss_pred ccccCChhHHHH-HhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIPDEKKFFD-LCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~~e~~~~~-~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.+++. ++|.. +..+++++||+||++||++|+.+.|.|++++..+++ +.|+.||++..+.++++|+|.++||+++|+
T Consensus 4 v~~l~~-~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 82 (108)
T 2trx_A 4 IIHLTD-DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82 (108)
T ss_dssp EEECCT-TTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEEE
T ss_pred ceecch-hhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEEe
Confidence 344544 45554 456789999999999999999999999999999975 999999999999999999999999999999
Q ss_pred CCeeeeeEecccCcchhhHhHHH
Q psy6451 212 DSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 212 ~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
+|+.+.++.|..+...+..|+.+
T Consensus 83 ~G~~~~~~~G~~~~~~l~~~l~~ 105 (108)
T 2trx_A 83 NGEVAATKVGALSKGQLKEFLDA 105 (108)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHH
T ss_pred CCEEEEEEecCCCHHHHHHHHHH
Confidence 99999999998776655555544
No 41
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.79 E-value=4.4e-19 Score=141.05 Aligned_cols=92 Identities=17% Similarity=0.325 Sum_probs=83.4
Q ss_pred cccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEeCCe
Q psy6451 135 EEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSV 214 (332)
Q Consensus 135 ~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~ 214 (332)
..+.+.++| +.+.+++++||+||++||++|+.+.|.|++++..++++.|++||++..+.++++|+|.++||+++|++|+
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 83 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVFIRDGK 83 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESSS
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCcccCEEEEEECCE
Confidence 445556678 7778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeEecccCcch
Q psy6451 215 TKDYIVGFTELGN 227 (332)
Q Consensus 215 ~v~~~~G~~~~~~ 227 (332)
.+.++.|..+...
T Consensus 84 ~v~~~~G~~~~~~ 96 (110)
T 2l6c_A 84 VAKVFSGIMNPRE 96 (110)
T ss_dssp EEEEEESCCCHHH
T ss_pred EEEEEcCCCCHHH
Confidence 9999999765543
No 42
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.79 E-value=9e-19 Score=147.59 Aligned_cols=92 Identities=28% Similarity=0.457 Sum_probs=86.8
Q ss_pred CCcccccCChhHHHHHhcc--CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 131 HGEYEEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~~--~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
.+.+.++++.++|...+.+ ++++||+||++||++|+.+.|.|++++..++++.|++||++..+.++++|+|.++||++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 90 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPTFL 90 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 4668889999999999887 89999999999999999999999999999989999999999999999999999999999
Q ss_pred EEeCCeeeeeEecc
Q psy6451 209 LVKDSVTKDYIVGF 222 (332)
Q Consensus 209 ~~~~G~~v~~~~G~ 222 (332)
+|++|+.+.++.|.
T Consensus 91 ~~~~G~~~~~~~G~ 104 (153)
T 2wz9_A 91 FFKNSQKIDRLDGA 104 (153)
T ss_dssp EEETTEEEEEEESS
T ss_pred EEECCEEEEEEeCC
Confidence 99999999999985
No 43
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.79 E-value=7.2e-19 Score=137.29 Aligned_cols=97 Identities=24% Similarity=0.391 Sum_probs=86.0
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeC
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~ 212 (332)
+.++ +.++|.+.+ +++++||+||++||++|+.+.|.++++++.+++ +.|+.||++..+.+++.|+|.++||+++|++
T Consensus 5 v~~l-~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (106)
T 3die_A 5 IVKV-TDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 82 (106)
T ss_dssp CEEC-CTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEET
T ss_pred eEEC-CHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEeC
Confidence 4445 445677777 889999999999999999999999999999987 9999999999999999999999999999999
Q ss_pred CeeeeeEecccCcchhhHhH
Q psy6451 213 SVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 213 G~~v~~~~G~~~~~~~~~f~ 232 (332)
|+.+.++.|..+...+..++
T Consensus 83 G~~~~~~~g~~~~~~l~~~l 102 (106)
T 3die_A 83 GQPVDKVVGFQPKENLAEVL 102 (106)
T ss_dssp TEEEEEEESCCCHHHHHHHH
T ss_pred CeEEEEEeCCCCHHHHHHHH
Confidence 99999999987765554444
No 44
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.79 E-value=1.2e-18 Score=137.77 Aligned_cols=103 Identities=20% Similarity=0.331 Sum_probs=91.7
Q ss_pred CCcccccCChhHHHHHhcc----CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcE
Q psy6451 131 HGEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPT 206 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~~----~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PT 206 (332)
.|.+.++.+.++|.+.+.. ++++||.||++||++|+.+.|.|++++..++++.|+.||++..+.+++.|+|.++||
T Consensus 3 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (113)
T 1ti3_A 3 EGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMPT 82 (113)
T ss_dssp CCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCSSTTE
T ss_pred CCceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCCcccE
Confidence 4668889999999988864 899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeeeeeEecccCcchhhHhHHH
Q psy6451 207 LTLVKDSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 207 l~~~~~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
+++|++|+.+.++.|. ....+..++.+
T Consensus 83 ~~~~~~G~~~~~~~g~-~~~~l~~~l~~ 109 (113)
T 1ti3_A 83 FIFLKDGKLVDKTVGA-DKDGLPTLVAK 109 (113)
T ss_dssp EEEEETTEEEEEEECC-CTTHHHHHHHH
T ss_pred EEEEeCCEEEEEEecC-CHHHHHHHHHH
Confidence 9999999999999995 44455444443
No 45
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.79 E-value=1.5e-18 Score=143.17 Aligned_cols=97 Identities=14% Similarity=0.194 Sum_probs=88.1
Q ss_pred CCcccccCChhHHHHHhc----cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcE
Q psy6451 131 HGEYEEIPDEKKFFDLCK----KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPT 206 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~----~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PT 206 (332)
.+.+.++.+.++|.+.+. +++++||+||++||++|+.+.|.|++++.+++++.|+.||++..+.+++.|+|.++||
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt 102 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPT 102 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCEESE
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCCcccE
Confidence 456888888889988773 5899999999999999999999999999999889999999999999999999999999
Q ss_pred EEEEeCCeeeeeEecccCcchh
Q psy6451 207 LTLVKDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 207 l~~~~~G~~v~~~~G~~~~~~~ 228 (332)
+++|++|+.+.++.|. ....+
T Consensus 103 ~~~~~~G~~~~~~~G~-~~~~l 123 (139)
T 3d22_A 103 FFFLRDGQQVDKLVGA-NKPEL 123 (139)
T ss_dssp EEEEETTEEEEEEESC-CHHHH
T ss_pred EEEEcCCeEEEEEeCC-CHHHH
Confidence 9999999999999997 43333
No 46
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.78 E-value=1.4e-18 Score=135.66 Aligned_cols=89 Identities=16% Similarity=0.299 Sum_probs=82.5
Q ss_pred ccccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHc-CCceEEEEECcCChHHHHhCCcccCcEEEEE
Q psy6451 134 YEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LETRFIKLNVERAPFLTERLRIKVIPTLTLV 210 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~-~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~ 210 (332)
+.++++.++|.+.+. +++++||.||++||++|+.+.|.|++++..+ +++.|+.||++.++.++++|+|.++||+++|
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 356778788888887 7899999999999999999999999999999 5699999999999999999999999999999
Q ss_pred eCCeeeeeEecc
Q psy6451 211 KDSVTKDYIVGF 222 (332)
Q Consensus 211 ~~G~~v~~~~G~ 222 (332)
++|+.+.++.|.
T Consensus 82 ~~G~~~~~~~g~ 93 (106)
T 1xwb_A 82 KNGVKVEEFAGA 93 (106)
T ss_dssp ETTEEEEEEESC
T ss_pred cCCcEEEEEcCC
Confidence 999999999994
No 47
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.78 E-value=1.2e-18 Score=138.01 Aligned_cols=91 Identities=21% Similarity=0.422 Sum_probs=81.9
Q ss_pred CcccccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc-CChHHHHhCCcccCcEEE
Q psy6451 132 GEYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE-RAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~-~~~~l~~~~~I~~~PTl~ 208 (332)
|.+.+++. ++|.+.+. +++++||+||++||++|+.+.|.|.+++..++++.|++||++ ..+.++++|+|.++||++
T Consensus 5 ~~v~~l~~-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~~~Pt~~ 83 (111)
T 2pu9_C 5 GKVTEVNK-DTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFK 83 (111)
T ss_dssp TSEEEECT-TTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSBSSEEE
T ss_pred CccEEech-HHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCCeeeEEE
Confidence 45666665 46777776 579999999999999999999999999999999999999998 789999999999999999
Q ss_pred EEeCCeeeeeEeccc
Q psy6451 209 LVKDSVTKDYIVGFT 223 (332)
Q Consensus 209 ~~~~G~~v~~~~G~~ 223 (332)
+|++|+.+.++.|..
T Consensus 84 ~~~~G~~~~~~~G~~ 98 (111)
T 2pu9_C 84 ILKENSVVGEVTGAK 98 (111)
T ss_dssp EESSSSEEEEEESSC
T ss_pred EEeCCcEEEEEcCCC
Confidence 999999999999974
No 48
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.78 E-value=2.4e-18 Score=143.69 Aligned_cols=104 Identities=24% Similarity=0.391 Sum_probs=90.5
Q ss_pred CcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEE
Q psy6451 132 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLV 210 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~ 210 (332)
+.+..++. ++|...+.+++++||+||++||++|+.+.|.|++++..+.+ +.|++||++..+.++++|+|.++||+++|
T Consensus 38 ~~v~~l~~-~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 116 (148)
T 3p2a_A 38 GEVINATA-ETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIMLY 116 (148)
T ss_dssp CCCEECCT-TTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCceecCH-HHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEEEE
Confidence 34555544 57888888899999999999999999999999999999964 99999999999999999999999999999
Q ss_pred eCCeeeeeEecccCcchhhHhHHHHH
Q psy6451 211 KDSVTKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 211 ~~G~~v~~~~G~~~~~~~~~f~~~~L 236 (332)
++|+.+.++.|..+...+..|+.+.+
T Consensus 117 ~~G~~~~~~~G~~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 117 RNGKMIDMLNGAVPKAPFDNWLDEQL 142 (148)
T ss_dssp ETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred ECCeEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999877766655555444
No 49
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.78 E-value=2.3e-18 Score=133.40 Aligned_cols=96 Identities=23% Similarity=0.319 Sum_probs=86.3
Q ss_pred hhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeE
Q psy6451 140 EKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYI 219 (332)
Q Consensus 140 e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~ 219 (332)
.++|.+.+.+++++||+||++||++|+.+.|.++++++.++++.|+.+|++..+.+++.|++.++||+++|++|+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~ 85 (104)
T 2e0q_A 6 SKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPTVIFFKDGEPVDEI 85 (104)
T ss_dssp TTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEEEE
T ss_pred HHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCccccCEEEEEECCeEhhhc
Confidence 35677888889999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred ecccCcchhhHhHHHH
Q psy6451 220 VGFTELGNCADFSTEM 235 (332)
Q Consensus 220 ~G~~~~~~~~~f~~~~ 235 (332)
.|..+...+..|+.+.
T Consensus 86 ~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 86 IGAVPREEIEIRIKNL 101 (104)
T ss_dssp ESCCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH
Confidence 9987766655555443
No 50
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.78 E-value=1.4e-18 Score=144.07 Aligned_cols=104 Identities=17% Similarity=0.242 Sum_probs=91.5
Q ss_pred ccccCChhHHH-HHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIPDEKKFF-DLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~~e~~~~-~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.+++ .++|. .++.+++++||.||++||++|+.+.|.|.+++..+++ +.|+.||++..+.++++|+|.++||+++|+
T Consensus 8 v~~l~-~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 86 (140)
T 3hz4_A 8 IIEFE-DMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKFFC 86 (140)
T ss_dssp EEEEC-HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEEEE
T ss_pred eEEcc-hHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEEEe
Confidence 44554 45666 6667889999999999999999999999999999998 999999999999999999999999999999
Q ss_pred CCeeeeeEecccCcchhhHhHHHHHHH
Q psy6451 212 DSVTKDYIVGFTELGNCADFSTEMLEW 238 (332)
Q Consensus 212 ~G~~v~~~~G~~~~~~~~~f~~~~Le~ 238 (332)
+|+.+.++.|..+...+..|+.+.++.
T Consensus 87 ~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 87 HGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 999999999998877776776666654
No 51
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.77 E-value=1.4e-18 Score=135.73 Aligned_cols=91 Identities=21% Similarity=0.365 Sum_probs=82.1
Q ss_pred hHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeE
Q psy6451 141 KKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYI 219 (332)
Q Consensus 141 ~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~ 219 (332)
++|...+.+++++||.||++||++|+.+.|.+++++..+++ +.|+.||++..+.++++|+|.++||+++|++|+.+.++
T Consensus 8 ~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~ 87 (105)
T 1nsw_A 8 ANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQL 87 (105)
T ss_dssp TTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEE
T ss_pred HhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeCCeEEEEE
Confidence 45677788889999999999999999999999999999987 99999999999999999999999999999999999999
Q ss_pred ecccCcchhhHh
Q psy6451 220 VGFTELGNCADF 231 (332)
Q Consensus 220 ~G~~~~~~~~~f 231 (332)
.|..+...+..+
T Consensus 88 ~G~~~~~~l~~~ 99 (105)
T 1nsw_A 88 IGYQPKEQLEAQ 99 (105)
T ss_dssp ESCCCHHHHHHH
T ss_pred ecCCCHHHHHHH
Confidence 998765544333
No 52
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.77 E-value=5e-18 Score=134.43 Aligned_cols=100 Identities=17% Similarity=0.302 Sum_probs=86.3
Q ss_pred ccccCChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.+++ .++|...+ .+++++||+||++||++|+.+.|.|++++..+++ +.|+.||++..+.++++|+|.++||+++|+
T Consensus 9 v~~l~-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 87 (115)
T 1thx_A 9 VITIT-DAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLVK 87 (115)
T ss_dssp EEECC-GGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eEEee-ccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEEc
Confidence 45554 45676654 6789999999999999999999999999999985 999999999999999999999999999999
Q ss_pred CCeeeeeEecccCcchhhHhHHH
Q psy6451 212 DSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 212 ~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
+|+.+.++.|..+...+..|+.+
T Consensus 88 ~G~~~~~~~g~~~~~~l~~~l~~ 110 (115)
T 1thx_A 88 GEQILDSTEGVISKDKLLSFLDT 110 (115)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHH
T ss_pred CCEEEEEecCCCCHHHHHHHHHH
Confidence 99999999998776555555443
No 53
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.77 E-value=2.8e-18 Score=134.15 Aligned_cols=98 Identities=22% Similarity=0.325 Sum_probs=83.6
Q ss_pred ccccCChhHHHHH-hccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIPDEKKFFDL-CKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~~e~~~~~~-~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.+++.+ +|... ..+++++||+||++||++|+.+.|.+++++..+++ +.|+.||++..+.++++|+|.++||+++|+
T Consensus 4 v~~l~~~-~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 82 (107)
T 2i4a_A 4 TLAVSDS-SFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLVR 82 (107)
T ss_dssp EEECCTT-THHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEEE
T ss_pred eeecchh-hhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEEe
Confidence 3445443 55544 46789999999999999999999999999999985 999999999999999999999999999999
Q ss_pred CCeeeeeEecccCcchhhHhH
Q psy6451 212 DSVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 212 ~G~~v~~~~G~~~~~~~~~f~ 232 (332)
+|+.+.++.|..+...+..|+
T Consensus 83 ~G~~~~~~~G~~~~~~l~~~l 103 (107)
T 2i4a_A 83 DGKVIDKKVGALPKSQLKAWV 103 (107)
T ss_dssp TTEEEEEEESCCCHHHHHHHH
T ss_pred CCEEEEEecCCCCHHHHHHHH
Confidence 999999999987655544443
No 54
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.77 E-value=1.7e-18 Score=144.70 Aligned_cols=88 Identities=11% Similarity=0.114 Sum_probs=79.0
Q ss_pred ccccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEE
Q psy6451 134 YEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLV 210 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~ 210 (332)
+.++.+.++|...+. ++++|||+||||||++|+.+.|.|++++.++.+ +.|++||++.++.++++|+|.++||+++|
T Consensus 5 l~~i~~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~ 84 (142)
T 1qgv_A 5 LPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFF 84 (142)
T ss_dssp SCBCCSHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEE
T ss_pred HhccCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEE
Confidence 456778888887664 589999999999999999999999999999954 99999999999999999999999999999
Q ss_pred eCCeeeeeEec
Q psy6451 211 KDSVTKDYIVG 221 (332)
Q Consensus 211 ~~G~~v~~~~G 221 (332)
++|+.+....|
T Consensus 85 ~~G~~v~~~~g 95 (142)
T 1qgv_A 85 FRNKHIMIDLG 95 (142)
T ss_dssp ETTEEEEEECC
T ss_pred ECCcEEEEecC
Confidence 99999985444
No 55
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.77 E-value=1.1e-18 Score=144.03 Aligned_cols=93 Identities=17% Similarity=0.191 Sum_probs=83.8
Q ss_pred CcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEEC---------cCChHHHHhCCcc
Q psy6451 132 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV---------ERAPFLTERLRIK 202 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~---------~~~~~l~~~~~I~ 202 (332)
|.+.++ +..+|.+.+.+ +|||+||++||++|+.+.|.|++++++|+ +.|++||+ +..+.++++|+|.
T Consensus 16 ~~v~~l-~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~ 91 (135)
T 3emx_A 16 GRLIYI-TPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGVE 91 (135)
T ss_dssp TEEEEC-CHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred Cceeec-CHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCCc
Confidence 455666 56788888876 99999999999999999999999999998 99999999 8889999999999
Q ss_pred cCcEEEEEeCCeeeeeEecccCcchh
Q psy6451 203 VIPTLTLVKDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 203 ~~PTl~~~~~G~~v~~~~G~~~~~~~ 228 (332)
++||+++|++|+.+.++.|..+...+
T Consensus 92 ~~Pt~~~~~~G~~v~~~~G~~~~~~~ 117 (135)
T 3emx_A 92 GTPTLVFYKEGRIVDKLVGATPWSLK 117 (135)
T ss_dssp SSSEEEEEETTEEEEEEESCCCHHHH
T ss_pred eeCeEEEEcCCEEEEEEeCCCCHHHH
Confidence 99999999999999999998775444
No 56
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.76 E-value=2.5e-18 Score=136.82 Aligned_cols=88 Identities=17% Similarity=0.267 Sum_probs=80.1
Q ss_pred hhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeee
Q psy6451 140 EKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDY 218 (332)
Q Consensus 140 e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~ 218 (332)
.++|.+.+ +++++||+||++||++|+.+.|.|++++..+++ +.|+.||++..+.++++|+|.++||+++|++|+.+.+
T Consensus 8 ~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~ 86 (112)
T 2voc_A 8 DQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVET 86 (112)
T ss_dssp TTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEETTEEEEE
T ss_pred HHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEEEE
Confidence 35677777 889999999999999999999999999999975 9999999999999999999999999999999999999
Q ss_pred EecccCcchh
Q psy6451 219 IVGFTELGNC 228 (332)
Q Consensus 219 ~~G~~~~~~~ 228 (332)
+.|..+...+
T Consensus 87 ~~G~~~~~~l 96 (112)
T 2voc_A 87 SVGFKPKEAL 96 (112)
T ss_dssp EESCCCHHHH
T ss_pred EeCCCCHHHH
Confidence 9998765443
No 57
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.76 E-value=3.7e-18 Score=133.52 Aligned_cols=98 Identities=23% Similarity=0.366 Sum_probs=85.3
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeC
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~ 212 (332)
+.+++. ++|...+.+++++||.||++||++|+.+.|.|++++..+++ +.|+.||++..+.++++|+|.++||+++|++
T Consensus 3 v~~l~~-~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (109)
T 2yzu_A 3 PIEVTD-QNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKD 81 (109)
T ss_dssp CEECCT-TTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceEccH-hHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeC
Confidence 444544 45667788899999999999999999999999999999985 9999999999999999999999999999999
Q ss_pred CeeeeeEecccCcchhhHhH
Q psy6451 213 SVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 213 G~~v~~~~G~~~~~~~~~f~ 232 (332)
|+.+.++.|..+...+..|+
T Consensus 82 g~~~~~~~g~~~~~~l~~~l 101 (109)
T 2yzu_A 82 GQPVEVLVGAQPKRNYQAKI 101 (109)
T ss_dssp TEEEEEEESCCCHHHHHHHH
T ss_pred CcEeeeEeCCCCHHHHHHHH
Confidence 99999999977655544443
No 58
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=4.3e-18 Score=138.60 Aligned_cols=105 Identities=15% Similarity=0.237 Sum_probs=89.2
Q ss_pred CcccccCChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcC-----CceEEEEECcCChHHHHhCCcccCc
Q psy6451 132 GEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-----ETRFIKLNVERAPFLTERLRIKVIP 205 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~-----~v~f~kVd~~~~~~l~~~~~I~~~P 205 (332)
+.+.+++. .+|.+.+ .+++++||+||++||++|+.+.|.|.+++..+. .+.|++||++..+.++++|+|.++|
T Consensus 7 ~~v~~l~~-~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 7 GDVIELTD-DSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CSCEECCT-THHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CcCEEcCH-hhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 34556655 4666655 678999999999999999999999999999985 4999999999999999999999999
Q ss_pred EEEEEeCCeeeeeEecccCcchhhHhHHHHHH
Q psy6451 206 TLTLVKDSVTKDYIVGFTELGNCADFSTEMLE 237 (332)
Q Consensus 206 Tl~~~~~G~~v~~~~G~~~~~~~~~f~~~~Le 237 (332)
|+++|.+|+.+.++.|......+..|+.+.+.
T Consensus 86 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 86 TIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp EEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred eEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 99999999999999998777666666555544
No 59
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.76 E-value=4.9e-18 Score=133.64 Aligned_cols=98 Identities=18% Similarity=0.264 Sum_probs=85.1
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcC----CceEEEEECcCChHHHHhCCcccCcEEEE
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL----ETRFIKLNVERAPFLTERLRIKVIPTLTL 209 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~----~v~f~kVd~~~~~~l~~~~~I~~~PTl~~ 209 (332)
+.++ +.++|.+.+. ++++||.||++||++|+.+.|.|.++++.+. .+.|++||++..+.++++|+|.++||+++
T Consensus 7 v~~l-~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (111)
T 3uvt_A 7 VLAL-TENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLL 84 (111)
T ss_dssp SEEC-CTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEc-ChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEE
Confidence 3444 4457777777 7899999999999999999999999999874 69999999999999999999999999999
Q ss_pred EeCCeeeeeEecccCcchhhHhHH
Q psy6451 210 VKDSVTKDYIVGFTELGNCADFST 233 (332)
Q Consensus 210 ~~~G~~v~~~~G~~~~~~~~~f~~ 233 (332)
|++|+.+.++.|..+...+..|+.
T Consensus 85 ~~~g~~~~~~~g~~~~~~l~~~l~ 108 (111)
T 3uvt_A 85 FRGGKKVSEHSGGRDLDSLHRFVL 108 (111)
T ss_dssp EETTEEEEEECSCCSHHHHHHHHH
T ss_pred EeCCcEEEeccCCcCHHHHHHHHH
Confidence 999999999999877666555543
No 60
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.76 E-value=6.5e-18 Score=131.58 Aligned_cols=93 Identities=22% Similarity=0.353 Sum_probs=81.6
Q ss_pred hHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeee
Q psy6451 141 KKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDY 218 (332)
Q Consensus 141 ~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~ 218 (332)
++|...+ .+++++||.||++||++|+.+.|.+++++.++++ +.|+.+|++..+.++++|+|.++||+++|++|+.+.+
T Consensus 8 ~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~ 87 (105)
T 1fb6_A 8 SSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKES 87 (105)
T ss_dssp TTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEE
T ss_pred hhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeCCeEEEE
Confidence 4566644 5678999999999999999999999999999986 9999999999999999999999999999999999999
Q ss_pred EecccCcchhhHhHH
Q psy6451 219 IVGFTELGNCADFST 233 (332)
Q Consensus 219 ~~G~~~~~~~~~f~~ 233 (332)
+.|..+...+..++.
T Consensus 88 ~~G~~~~~~l~~~l~ 102 (105)
T 1fb6_A 88 IIGAVPKSTLTDSIE 102 (105)
T ss_dssp EEECCCHHHHHHHHH
T ss_pred EecCCCHHHHHHHHH
Confidence 999876655544443
No 61
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.76 E-value=3.1e-18 Score=140.26 Aligned_cols=101 Identities=21% Similarity=0.279 Sum_probs=86.7
Q ss_pred ccccCChhHHHHH-hccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIPDEKKFFDL-CKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~~e~~~~~~-~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.+++. ++|... +.+++++||.||++||++|+.+.|.|+++++.+++ +.|++||++..+.++++|+|.++||+++|+
T Consensus 24 v~~l~~-~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 102 (128)
T 2o8v_B 24 IIHLTD-DSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 102 (128)
T ss_dssp SEEECT-TTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEEE
T ss_pred cEecCh-hhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEEe
Confidence 555544 456644 57789999999999999999999999999999985 999999999999999999999999999999
Q ss_pred CCeeeeeEecccCcchhhHhHHHH
Q psy6451 212 DSVTKDYIVGFTELGNCADFSTEM 235 (332)
Q Consensus 212 ~G~~v~~~~G~~~~~~~~~f~~~~ 235 (332)
+|+.+.++.|..+...+..|+.+.
T Consensus 103 ~G~~~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 103 NGEVAATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHh
Confidence 999999999987766665555443
No 62
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.76 E-value=4.2e-18 Score=152.34 Aligned_cols=109 Identities=21% Similarity=0.301 Sum_probs=93.0
Q ss_pred cCCCCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcE
Q psy6451 128 QQGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPT 206 (332)
Q Consensus 128 k~g~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PT 206 (332)
..+++.+..++.+..-..+++++++|||+||++||++|+.+.|.|++++.++++ +.|++||++..+.++++|+|.++||
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPT 87 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSE
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCE
Confidence 356677777776644444678899999999999999999999999999999987 9999999999999999999999999
Q ss_pred EEEEeCCeeeeeEecccCcchhhHhHHHHH
Q psy6451 207 LTLVKDSVTKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 207 l~~~~~G~~v~~~~G~~~~~~~~~f~~~~L 236 (332)
+++|++|+.+.++.|..+...+..|+.+.+
T Consensus 88 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 88 LLLFKNGEVAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEEECCeEEEEeccccChHHHHHHHHhhc
Confidence 999999999999999877666555544433
No 63
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.76 E-value=4e-18 Score=138.65 Aligned_cols=101 Identities=17% Similarity=0.181 Sum_probs=82.0
Q ss_pred CcccccCChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHc------CCceEEEEECcCChHHHHhCCcccC
Q psy6451 132 GEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKH------LETRFIKLNVERAPFLTERLRIKVI 204 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~------~~v~f~kVd~~~~~~l~~~~~I~~~ 204 (332)
+.+.+++ .++|.+.+ .++++|||+||||||++|+.+.|.|++++..+ +.+.|++||++.++.++++|+|.++
T Consensus 15 ~~v~~l~-~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 15 SRVVELT-DETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCEECC-TTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CceEECC-hhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 3455554 44677776 46899999999999999999999999999865 2499999999999999999999999
Q ss_pred cEEEEEeCCeee--eeEecccCcchhhHhHH
Q psy6451 205 PTLTLVKDSVTK--DYIVGFTELGNCADFST 233 (332)
Q Consensus 205 PTl~~~~~G~~v--~~~~G~~~~~~~~~f~~ 233 (332)
||+++|++|..+ ..+.|......+..|+.
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~ 124 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYLSLVDSFVF 124 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCHHHHHHHHH
T ss_pred CEEEEEeCCCCCCceEecCCccHHHHHHHHH
Confidence 999999988765 46777666655544443
No 64
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.76 E-value=4.1e-18 Score=133.54 Aligned_cols=95 Identities=18% Similarity=0.355 Sum_probs=83.1
Q ss_pred ChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeee
Q psy6451 139 DEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 139 ~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v 216 (332)
+.++|.+.+ .+++++||.||++||++|+.+.|.|++++..+++ +.|+.||++..+.++++|+|.++||+++|++|+.+
T Consensus 7 ~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 86 (107)
T 1dby_A 7 NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKC 86 (107)
T ss_dssp CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEESSSSEE
T ss_pred cHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEeCCEEE
Confidence 345676654 5689999999999999999999999999999986 99999999999999999999999999999999999
Q ss_pred eeEecccCcchhhHhHH
Q psy6451 217 DYIVGFTELGNCADFST 233 (332)
Q Consensus 217 ~~~~G~~~~~~~~~f~~ 233 (332)
.++.|..+...+..++.
T Consensus 87 ~~~~G~~~~~~l~~~l~ 103 (107)
T 1dby_A 87 ETIIGAVPKATIVQTVE 103 (107)
T ss_dssp EEEESCCCHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHH
Confidence 99999877655544443
No 65
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.76 E-value=7.9e-18 Score=135.89 Aligned_cols=92 Identities=22% Similarity=0.459 Sum_probs=81.9
Q ss_pred CCcccccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc-CChHHHHhCCcccCcEE
Q psy6451 131 HGEYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE-RAPFLTERLRIKVIPTL 207 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~-~~~~l~~~~~I~~~PTl 207 (332)
.+.+.+++++ +|.+.+. +++++||+||++||++|+.+.|.+++++++|+++.|+.||++ ..+.++++|+|.++||+
T Consensus 17 ~~~v~~l~~~-~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~~~Pt~ 95 (124)
T 1faa_A 17 VGKVTEVNKD-TFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTF 95 (124)
T ss_dssp TTSEEEECTT-THHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSSSSEE
T ss_pred CCceEEecch-hHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCCeeeEE
Confidence 4556666654 5666665 679999999999999999999999999999999999999998 78999999999999999
Q ss_pred EEEeCCeeeeeEeccc
Q psy6451 208 TLVKDSVTKDYIVGFT 223 (332)
Q Consensus 208 ~~~~~G~~v~~~~G~~ 223 (332)
++|++|+.+.++.|..
T Consensus 96 ~~~~~G~~~~~~~G~~ 111 (124)
T 1faa_A 96 KILKENSVVGEVTGAK 111 (124)
T ss_dssp EEEETTEEEEEEESSC
T ss_pred EEEeCCcEEEEEcCCC
Confidence 9999999999999974
No 66
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.76 E-value=8e-18 Score=134.78 Aligned_cols=98 Identities=20% Similarity=0.307 Sum_probs=84.1
Q ss_pred CCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEE
Q psy6451 131 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTL 209 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~ 209 (332)
.+.+.+++++.....++.+++++||+||++||++|+.+.|.|++++..+++ +.|+.||++..+.++++|+|.++||+++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 90 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLIL 90 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEEE
Confidence 344566666544444567789999999999999999999999999999975 9999999999999999999999999999
Q ss_pred EeCCeeeeeEecccCcchh
Q psy6451 210 VKDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 210 ~~~G~~v~~~~G~~~~~~~ 228 (332)
|++|+.+.++.|..+...+
T Consensus 91 ~~~g~~~~~~~G~~~~~~l 109 (121)
T 2i1u_A 91 FKDGQPVKRIVGAKGKAAL 109 (121)
T ss_dssp EETTEEEEEEESCCCHHHH
T ss_pred EECCEEEEEecCCCCHHHH
Confidence 9999999999997765443
No 67
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.75 E-value=3.2e-18 Score=141.07 Aligned_cols=94 Identities=18% Similarity=0.289 Sum_probs=85.4
Q ss_pred cCCCCcccccCChhHHHHHhcc--CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCc
Q psy6451 128 QQGHGEYEEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIP 205 (332)
Q Consensus 128 k~g~g~~~ei~~e~~~~~~~~~--~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~P 205 (332)
..+.+.+.++++.++|...+.. +++|||+||++||++|+.+.|.|++++..+ ++.|++||++..+.++++|+|.++|
T Consensus 16 ~~~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v~~~P 94 (133)
T 3cxg_A 16 FQGQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNIKALP 94 (133)
T ss_dssp EETTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTCCSSS
T ss_pred ccCCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCCCCCC
Confidence 3456678899998899988865 469999999999999999999999999888 7999999999999999999999999
Q ss_pred EEEEEe--CCe--eeeeEecc
Q psy6451 206 TLTLVK--DSV--TKDYIVGF 222 (332)
Q Consensus 206 Tl~~~~--~G~--~v~~~~G~ 222 (332)
|+++|+ +|+ .+.++.|.
T Consensus 95 t~~~~~~~~g~g~~~~~~~G~ 115 (133)
T 3cxg_A 95 TFEFYFNLNNEWVLVHTVEGA 115 (133)
T ss_dssp EEEEEEEETTEEEEEEEEESC
T ss_pred EEEEEEecCCCeEEEEEEcCC
Confidence 999997 998 89999997
No 68
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.75 E-value=4.5e-18 Score=136.80 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=82.0
Q ss_pred ccccCChhHHH-HHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIPDEKKFF-DLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~~e~~~~-~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.+++ .++|. .++.+++++||+||++||++|+.+.|.|++++..+++ +.|++||++..+.++.+|+|.++||+++|.
T Consensus 5 v~~l~-~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 83 (122)
T 3aps_A 5 SIDLT-PQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQ 83 (122)
T ss_dssp SEECC-HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred hhcCC-HHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEEe
Confidence 34454 45664 4567889999999999999999999999999999984 999999999999999999999999999998
Q ss_pred CCeeeeeEecc----cCcchhhHhHH
Q psy6451 212 DSVTKDYIVGF----TELGNCADFST 233 (332)
Q Consensus 212 ~G~~v~~~~G~----~~~~~~~~f~~ 233 (332)
+|..+.++.|. .+...+..|+.
T Consensus 84 ~~~~~~~~~g~~~~~~~~~~l~~~l~ 109 (122)
T 3aps_A 84 YERAKKSIWEEQINSRDAKTIAALIY 109 (122)
T ss_dssp EEGGGTEEEEEEECCSCHHHHHHHHH
T ss_pred CCCccceeeccccCcCCHHHHHHHHH
Confidence 77778888886 34444444433
No 69
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.75 E-value=4.4e-18 Score=157.09 Aligned_cols=101 Identities=14% Similarity=0.256 Sum_probs=88.8
Q ss_pred cccccCChhHHHHHhcc--CCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEE
Q psy6451 133 EYEEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTL 209 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~~~--~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~ 209 (332)
.+.+++. .+|.+++.. +++|||+||+|||++|+.+.|.|++++.+|++ +.|++||++.++.+++.|+|.++||+++
T Consensus 8 ~v~~~~~-~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 86 (287)
T 3qou_A 8 NIVNINE-SNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYL 86 (287)
T ss_dssp TEEECCT-TTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEEE
T ss_pred ccEECCH-HHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEEE
Confidence 4555554 577787754 79999999999999999999999999999987 9999999999999999999999999999
Q ss_pred EeCCeeeeeEecccCcchhhHhHHH
Q psy6451 210 VKDSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 210 ~~~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
|++|+++.++.|..+...+..|+..
T Consensus 87 ~~~G~~~~~~~g~~~~~~l~~~l~~ 111 (287)
T 3qou_A 87 FQNGQPVDGFQGPQPEEAIRALLDX 111 (287)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHH
T ss_pred EECCEEEEEeeCCCCHHHHHHHHHH
Confidence 9999999999998776666555544
No 70
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=5.3e-18 Score=139.65 Aligned_cols=100 Identities=12% Similarity=0.212 Sum_probs=85.6
Q ss_pred CcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC----ceEEEEECcCChHHHHhCCcccCcEE
Q psy6451 132 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE----TRFIKLNVERAPFLTERLRIKVIPTL 207 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~----v~f~kVd~~~~~~l~~~~~I~~~PTl 207 (332)
+.+.++ +.++|...+.+++++||+||++||++|+.+.|.|.+++..+.+ +.|++||++..+.++++|+|.++||+
T Consensus 17 ~~v~~l-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 95 (140)
T 2dj1_A 17 NGVWVL-NDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTI 95 (140)
T ss_dssp TTEEEC-CTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEE
T ss_pred CCCEEc-ChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeE
Confidence 345666 5567888888899999999999999999999999999998864 89999999999999999999999999
Q ss_pred EEEeCCeeeeeEecccCcchhhHhHH
Q psy6451 208 TLVKDSVTKDYIVGFTELGNCADFST 233 (332)
Q Consensus 208 ~~~~~G~~v~~~~G~~~~~~~~~f~~ 233 (332)
++|++|+ +.++.|......+..|+.
T Consensus 96 ~~~~~G~-~~~~~g~~~~~~l~~~l~ 120 (140)
T 2dj1_A 96 KILKKGQ-AVDYDGSRTQEEIVAKVR 120 (140)
T ss_dssp EEEETTE-EEECCSCCCHHHHHHHHH
T ss_pred EEEECCc-EEEcCCCCCHHHHHHHHH
Confidence 9999999 778888766555444433
No 71
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=7.6e-18 Score=136.94 Aligned_cols=105 Identities=14% Similarity=0.179 Sum_probs=87.4
Q ss_pred CCcccccCChhHHHH-HhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 131 HGEYEEIPDEKKFFD-LCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~-~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
.+.+.+++. ++|.. +..+++++||+||++||++|+.+.|.|++++..+++ +.|+.||++..+.++.+|+|.++||++
T Consensus 16 ~~~v~~l~~-~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 94 (130)
T 2dml_A 16 SDDVIELTP-SNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIK 94 (130)
T ss_dssp TSSSEECCT-TTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEE
T ss_pred CCCcEECCH-HHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEE
Confidence 345666665 46666 446789999999999999999999999999999987 999999999999999999999999999
Q ss_pred EEeCCee-eeeEecccCcchhhHhHHHHH
Q psy6451 209 LVKDSVT-KDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 209 ~~~~G~~-v~~~~G~~~~~~~~~f~~~~L 236 (332)
+|.+|.. +.++.|......+..|+.+.+
T Consensus 95 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 95 IFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp EESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 9987765 888888776655555544443
No 72
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.74 E-value=1.3e-17 Score=134.30 Aligned_cols=91 Identities=19% Similarity=0.316 Sum_probs=82.0
Q ss_pred ccccC-ChhHHHHH-hccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 134 YEEIP-DEKKFFDL-CKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 134 ~~ei~-~e~~~~~~-~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+..+. +..+|.+. .++++++||.||++||++|+.+.|.|++++..++++.|++||++..+.++++|+|.++||+++|+
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~ 84 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSSIPALFFVK 84 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCCCCCEEEEEe
Confidence 45565 67788754 46789999999999999999999999999999977999999999999999999999999999999
Q ss_pred C----CeeeeeEecccC
Q psy6451 212 D----SVTKDYIVGFTE 224 (332)
Q Consensus 212 ~----G~~v~~~~G~~~ 224 (332)
+ |+.+.++.|..+
T Consensus 85 ~~~~~G~~~~~~~G~~~ 101 (118)
T 2f51_A 85 KEGNEIKTLDQFVGADV 101 (118)
T ss_dssp EETTEEEEEEEEESCCH
T ss_pred CCCCcceEEEeecCCCH
Confidence 8 999999999753
No 73
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.74 E-value=3.6e-18 Score=139.27 Aligned_cols=86 Identities=17% Similarity=0.305 Sum_probs=77.8
Q ss_pred HhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccC
Q psy6451 146 LCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTE 224 (332)
Q Consensus 146 ~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~ 224 (332)
...+++++||+||++||++|+.+.|.++++++++++ +.|+.||++..+.++++|+|.++||+++|++|+.+.++.|..+
T Consensus 38 ~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~ 117 (128)
T 3ul3_B 38 VNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLARKDHFVS 117 (128)
T ss_dssp TTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCC
T ss_pred HHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEEEecCCCC
Confidence 345789999999999999999999999999999975 9999999999999999999999999999999999999999776
Q ss_pred cchhhHh
Q psy6451 225 LGNCADF 231 (332)
Q Consensus 225 ~~~~~~f 231 (332)
...+..|
T Consensus 118 ~~~l~~~ 124 (128)
T 3ul3_B 118 SNDLIAL 124 (128)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6554443
No 74
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=3.9e-18 Score=140.68 Aligned_cols=102 Identities=18% Similarity=0.253 Sum_probs=88.5
Q ss_pred CcccccCChhHHHHHhccCC--cEEEEEecCCChhhHHHHHHHHHHHHHcC--CceEEEEECcCChHHHHhCCcc-----
Q psy6451 132 GEYEEIPDEKKFFDLCKKSP--NMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERAPFLTERLRIK----- 202 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~~~--~VvV~Fya~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~~~~l~~~~~I~----- 202 (332)
+.+.+++ ..+|.+.+..++ +|||+||++||++|+.+.|.|++++.+|. .+.|++||++.++.++++|+|.
T Consensus 7 ~~v~~l~-~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 7 GYIKYFN-DKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp SCCEECC-TTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred ceEEEcc-HhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 4455555 456777775554 89999999999999999999999999996 4999999999999999999999
Q ss_pred -cCcEEEEEeCCeeeeeEecccCcchhhHhHHH
Q psy6451 203 -VIPTLTLVKDSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 203 -~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
++||+++|++|+.+.++.|..+...+..|+.+
T Consensus 86 ~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 86 KQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SCSSEEEEESSSSEEEEESCBCSSSCBCCCCCC
T ss_pred CCCCEEEEEECCEEEEEecCcCchHHHHHHHhc
Confidence 99999999999999999999888777666644
No 75
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=134.77 Aligned_cols=94 Identities=20% Similarity=0.315 Sum_probs=79.5
Q ss_pred CCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcC--CceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 131 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
.+.+.+++ .++|.+.+++ .+||+||++||++|+.+.|.|++++..++ ++.|+.||++..+.++++|+|.++||++
T Consensus 6 ~~~v~~l~-~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 82 (126)
T 1x5e_A 6 SGNVRVIT-DENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIY 82 (126)
T ss_dssp CCSEEECC-TTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCccEEec-HHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEE
Confidence 45566664 4567777654 39999999999999999999999999987 4999999999999999999999999999
Q ss_pred EEeCCeeeeeEecccCcchh
Q psy6451 209 LVKDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 209 ~~~~G~~v~~~~G~~~~~~~ 228 (332)
+|++|+ +.++.|..+...+
T Consensus 83 ~~~~G~-~~~~~G~~~~~~l 101 (126)
T 1x5e_A 83 HCKDGE-FRRYQGPRTKKDF 101 (126)
T ss_dssp EEETTE-EEECCSCCCHHHH
T ss_pred EEeCCe-EEEeecCCCHHHH
Confidence 999999 5778886654443
No 76
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.73 E-value=1.9e-17 Score=136.61 Aligned_cols=101 Identities=20% Similarity=0.310 Sum_probs=83.4
Q ss_pred CcccccCChhHHHHHhc------------cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHh
Q psy6451 132 GEYEEIPDEKKFFDLCK------------KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTER 198 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~------------~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~ 198 (332)
+.+..+ +..+|...+. +++++||+||++||++|+.+.|.|.+++..|++ +.|+.||++..+.++++
T Consensus 22 ~~v~~l-~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 100 (141)
T 3hxs_A 22 SGTIHL-TRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARD 100 (141)
T ss_dssp -CCEEC-CHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCcccc-cHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHH
Confidence 344555 4556766665 379999999999999999999999999999986 99999999999999999
Q ss_pred CCcccCcEEEEE-eCCeeeeeEecccCcchhhHhHHH
Q psy6451 199 LRIKVIPTLTLV-KDSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 199 ~~I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
|+|.++||+++| ++|+++ ++.|..+...+..|+.+
T Consensus 101 ~~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~ 136 (141)
T 3hxs_A 101 FGIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDK 136 (141)
T ss_dssp TTCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHH
T ss_pred cCCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHH
Confidence 999999999999 577776 88887766555444443
No 77
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.72 E-value=4.8e-18 Score=142.32 Aligned_cols=101 Identities=10% Similarity=0.172 Sum_probs=72.3
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCC--ChhhHHHHHHHHHHHHHcCCce--EEEEECcCChHHHHhCCcccCcEEEE
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDG--SVNCKILDEHMKTLCKKHLETR--FIKLNVERAPFLTERLRIKVIPTLTL 209 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~w--c~~Ck~l~~~l~~La~~~~~v~--f~kVd~~~~~~l~~~~~I~~~PTl~~ 209 (332)
+..+++ .+|.+.+.+++.+||.||++| |++|+.+.|.|++++++|+.+. |++||++.++.++.+|+|.++||+++
T Consensus 19 ~~~l~~-~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~ 97 (142)
T 2es7_A 19 WQPVEA-STVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRRFPATLV 97 (142)
T ss_dssp CEECCC-C--------CCSEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCCSSSEEEE
T ss_pred Cccccc-ccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCCCcCCeEEE
Confidence 344444 578888888888999999987 9999999999999999995588 99999999999999999999999999
Q ss_pred EeCCeeeeeEecccCcchhhHhHHHH
Q psy6451 210 VKDSVTKDYIVGFTELGNCADFSTEM 235 (332)
Q Consensus 210 ~~~G~~v~~~~G~~~~~~~~~f~~~~ 235 (332)
|++|+.+.++.|..+...+.+++.+.
T Consensus 98 fk~G~~v~~~~G~~~~~~l~~~i~~~ 123 (142)
T 2es7_A 98 FTDGKLRGALSGIHPWAELLTLMRSI 123 (142)
T ss_dssp ESCC----CEESCCCHHHHHHHHHHH
T ss_pred EeCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 99999999999987765554554443
No 78
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.72 E-value=5.3e-17 Score=133.79 Aligned_cols=95 Identities=18% Similarity=0.307 Sum_probs=81.1
Q ss_pred CcccccCChhHHHHHhc------------cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHh
Q psy6451 132 GEYEEIPDEKKFFDLCK------------KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTER 198 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~------------~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~ 198 (332)
+.+.+++ ..+|.+.+. +++++||+||++||++|+.+.|.|.+++.++++ +.|+.||++..+.++++
T Consensus 9 ~~v~~l~-~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 9 GKVIHLT-KAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TSEEEEC-HHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CceEEec-chHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence 3455554 457777664 468999999999999999999999999999975 99999999999999999
Q ss_pred CCcccCcEEEEE-eCCeeeeeEecccCcchh
Q psy6451 199 LRIKVIPTLTLV-KDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 199 ~~I~~~PTl~~~-~~G~~v~~~~G~~~~~~~ 228 (332)
|+|.++||+++| ++|+.+ ++.|..+...+
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l 117 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPE-MAQGAMPKASF 117 (136)
T ss_dssp TTCCSSCEEEEECSSSCCE-EEESCCCHHHH
T ss_pred cCCCCCCEEEEECCCCcEE-EEeCCCCHHHH
Confidence 999999999999 899988 67886655443
No 79
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.71 E-value=4.8e-17 Score=144.02 Aligned_cols=102 Identities=15% Similarity=0.224 Sum_probs=89.3
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeC
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~ 212 (332)
+..+ +..+|...+.+++++||+||++||++|+.+.|.|++++..+++ +.|+.||++..+.++..|+|.++||+++|++
T Consensus 99 v~~l-~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 177 (210)
T 3apq_A 99 IITL-ERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRS 177 (210)
T ss_dssp SEEC-CHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEECT
T ss_pred eEEe-cHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEEEEC
Confidence 4444 4567888888899999999999999999999999999999987 9999999999999999999999999999999
Q ss_pred CeeeeeEecccCcchhhHhHHHHH
Q psy6451 213 SVTKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 213 G~~v~~~~G~~~~~~~~~f~~~~L 236 (332)
|+.+.++.|..+...+..|+.+.|
T Consensus 178 G~~~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 178 GMAAVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp TSCCEECCSCCCHHHHHHHHHHHH
T ss_pred CCceeEecCCCCHHHHHHHHHHhC
Confidence 999999999777666555554443
No 80
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.71 E-value=5.1e-18 Score=138.07 Aligned_cols=98 Identities=23% Similarity=0.368 Sum_probs=78.7
Q ss_pred ccccCChhHHH-HHhccCCcEEEEEecCCCh--------------hhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHH
Q psy6451 134 YEEIPDEKKFF-DLCKKSPNMVVHFYKDGSV--------------NCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTE 197 (332)
Q Consensus 134 ~~ei~~e~~~~-~~~~~~~~VvV~Fya~wc~--------------~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~ 197 (332)
+.+++. .+|. .++++++++||+||+|||+ +|+.+.|.+++++++|++ +.|++||++.++.+++
T Consensus 5 v~~l~~-~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~ 83 (123)
T 1oaz_A 5 IIHLTD-DSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 83 (123)
T ss_dssp CEECCS-TTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTGG
T ss_pred cEecCh-hhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHH
Confidence 445544 4555 4457789999999999999 999999999999999975 9999999999999999
Q ss_pred hCCcccCcEEEEEeCCeeeeeEecccCcchhhHhH
Q psy6451 198 RLRIKVIPTLTLVKDSVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 198 ~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~ 232 (332)
+|+|.++||+++|++|+.+.++.|..+...+.+|+
T Consensus 84 ~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l 118 (123)
T 1oaz_A 84 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 118 (123)
T ss_dssp GGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHH
T ss_pred HcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHH
Confidence 99999999999999999999999987655544443
No 81
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.71 E-value=1.4e-17 Score=133.46 Aligned_cols=93 Identities=11% Similarity=0.139 Sum_probs=75.9
Q ss_pred ChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEE----CcCChHHHHhCCcccCcEEEEEeCC
Q psy6451 139 DEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLN----VERAPFLTERLRIKVIPTLTLVKDS 213 (332)
Q Consensus 139 ~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd----~~~~~~l~~~~~I~~~PTl~~~~~G 213 (332)
+.++|...+.+++++||+||+|||++|+.+.|.|++++..+.. +.++.++ ++..+.++++|+|.++||+++|++|
T Consensus 18 ~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G 97 (118)
T 1zma_A 18 TVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDG 97 (118)
T ss_dssp CHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETT
T ss_pred CHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECC
Confidence 5667888888899999999999999999999999999998863 5554222 2233578899999999999999999
Q ss_pred eeeeeEecccCcchhhHh
Q psy6451 214 VTKDYIVGFTELGNCADF 231 (332)
Q Consensus 214 ~~v~~~~G~~~~~~~~~f 231 (332)
+.+.++.|..+...+..|
T Consensus 98 ~~~~~~~G~~~~~~l~~~ 115 (118)
T 1zma_A 98 QINVRCDSSMSAQEIKDF 115 (118)
T ss_dssp EEEEECCTTCCHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHH
Confidence 999999997766554443
No 82
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.70 E-value=5.8e-17 Score=129.79 Aligned_cols=88 Identities=8% Similarity=-0.013 Sum_probs=81.5
Q ss_pred CcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChH----HHHhCCcc-cCcE
Q psy6451 132 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPF----LTERLRIK-VIPT 206 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~----l~~~~~I~-~~PT 206 (332)
+.+..|++.++|.++++++++|||+|+|+|||+|+.+.|.|++++.. +++.|++||+++++. ++++|+|+ ..||
T Consensus 6 ~~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq 84 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQ 84 (112)
T ss_dssp GCEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSE
T ss_pred cceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCCccCCCe
Confidence 56788999999999999999999999999999999999999999986 779999999999966 79999999 5999
Q ss_pred EEEEeCCeeeeeEe
Q psy6451 207 LTLVKDSVTKDYIV 220 (332)
Q Consensus 207 l~~~~~G~~v~~~~ 220 (332)
+++|++|+.+.+-.
T Consensus 85 ~il~k~G~~v~~~S 98 (112)
T 3iv4_A 85 AFYFVNGEMVWNRD 98 (112)
T ss_dssp EEEEETTEEEEEEE
T ss_pred EEEEECCEEEEEee
Confidence 99999999998844
No 83
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.69 E-value=1.1e-17 Score=132.98 Aligned_cols=94 Identities=17% Similarity=0.239 Sum_probs=81.5
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcC----CceEEEEECcCChHHHHhCCcccCcEEEE
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL----ETRFIKLNVERAPFLTERLRIKVIPTLTL 209 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~----~v~f~kVd~~~~~~l~~~~~I~~~PTl~~ 209 (332)
+.+++ .++|.+.+.+++++||+||++||++|+.+.|.|.+++..+. .+.|++||++..+.++++|+|.++||+++
T Consensus 9 v~~l~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 87 (120)
T 1mek_A 9 VLVLR-KSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKF 87 (120)
T ss_dssp EEECC-TTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEEEE
T ss_pred cEEec-hhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEEEE
Confidence 44444 45777888889999999999999999999999999999885 48999999999999999999999999999
Q ss_pred EeCCeee--eeEecccCcchh
Q psy6451 210 VKDSVTK--DYIVGFTELGNC 228 (332)
Q Consensus 210 ~~~G~~v--~~~~G~~~~~~~ 228 (332)
|++|+.+ .++.|..+...+
T Consensus 88 ~~~g~~~~~~~~~g~~~~~~l 108 (120)
T 1mek_A 88 FRNGDTASPKEYTAGREADDI 108 (120)
T ss_dssp EESSCSSSCEECCCCSSHHHH
T ss_pred EeCCCcCCcccccCccCHHHH
Confidence 9999987 888886554443
No 84
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.69 E-value=6.8e-17 Score=132.89 Aligned_cols=95 Identities=17% Similarity=0.312 Sum_probs=83.2
Q ss_pred cccccCChhHHHHHhcc--CCcEEEEEecCCChhhHHHHHHH---HHHHHHcCCceEEEEEC----cCChHHHHhCCccc
Q psy6451 133 EYEEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHM---KTLCKKHLETRFIKLNV----ERAPFLTERLRIKV 203 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~~~--~~~VvV~Fya~wc~~Ck~l~~~l---~~La~~~~~v~f~kVd~----~~~~~l~~~~~I~~ 203 (332)
.+..+.+..++...+.. ++++||+||++||++|+.+.|.+ ..++..++++.|++||+ +..+.++++|+|.+
T Consensus 12 ~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v~~ 91 (134)
T 2fwh_A 12 NFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLG 91 (134)
T ss_dssp CCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTCCS
T ss_pred CcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCCCC
Confidence 35567788888877754 79999999999999999999999 99999999999999999 55678999999999
Q ss_pred CcEEEEE-eCCeee--eeEecccCcch
Q psy6451 204 IPTLTLV-KDSVTK--DYIVGFTELGN 227 (332)
Q Consensus 204 ~PTl~~~-~~G~~v--~~~~G~~~~~~ 227 (332)
+||+++| ++|+++ .++.|..+...
T Consensus 92 ~Pt~~~~d~~G~~v~~~~~~G~~~~~~ 118 (134)
T 2fwh_A 92 LPTILFFDGQGQEHPQARVTGFMDAET 118 (134)
T ss_dssp SSEEEEECTTSCBCGGGCBCSCCCHHH
T ss_pred CCEEEEECCCCCEeeeeeeeeccCHHH
Confidence 9999999 899998 78999766544
No 85
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.68 E-value=1.5e-16 Score=128.85 Aligned_cols=81 Identities=14% Similarity=0.188 Sum_probs=74.0
Q ss_pred hccCCcEEEEEecCCChhhHHHHHHHHHHHHHc-CCceEEEEE--CcCChHHHHhCCcccCcEEEEEe-CCeeeeeEecc
Q psy6451 147 CKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LETRFIKLN--VERAPFLTERLRIKVIPTLTLVK-DSVTKDYIVGF 222 (332)
Q Consensus 147 ~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~-~~v~f~kVd--~~~~~~l~~~~~I~~~PTl~~~~-~G~~v~~~~G~ 222 (332)
..+++++||+||++||++|+.+.|.|.+++..+ .++.|+.|| ++..+.+++.|+|.++||+++|. +|+.+.++.|.
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~ 102 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGL 102 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESC
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCC
Confidence 456789999999999999999999999999999 569999999 99999999999999999999998 99999999997
Q ss_pred cCcch
Q psy6451 223 TELGN 227 (332)
Q Consensus 223 ~~~~~ 227 (332)
.+...
T Consensus 103 ~~~~~ 107 (126)
T 2l57_A 103 MRKNN 107 (126)
T ss_dssp CCHHH
T ss_pred CCHHH
Confidence 65433
No 86
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.68 E-value=6.2e-18 Score=137.13 Aligned_cols=92 Identities=20% Similarity=0.362 Sum_probs=85.3
Q ss_pred CCcccccCChhHHHHHhcc----CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcE
Q psy6451 131 HGEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPT 206 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~~----~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PT 206 (332)
.+.+.++++.++|.+.+.. ++++||+||++||++|+.+.|.|.+++..|+++.|+.||++..+.++++|+|.++||
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt 92 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPT 92 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCCSSCC
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCCccce
Confidence 4568888888888888754 899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeeeeeEecc
Q psy6451 207 LTLVKDSVTKDYIVGF 222 (332)
Q Consensus 207 l~~~~~G~~v~~~~G~ 222 (332)
+++|++|+.+.++.|.
T Consensus 93 ~~~~~~g~~~~~~~g~ 108 (130)
T 1wmj_A 93 FLFIKDGAEADKVVGA 108 (130)
T ss_dssp CCBCTTTTCCBCCCTT
T ss_pred EEEEeCCeEEEEEeCC
Confidence 9999999999999985
No 87
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.67 E-value=1.9e-16 Score=152.71 Aligned_cols=102 Identities=16% Similarity=0.260 Sum_probs=86.8
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHc------CC-ceEEEEECcCChHHHHhCCcccCcE
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKH------LE-TRFIKLNVERAPFLTERLRIKVIPT 206 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~------~~-v~f~kVd~~~~~~l~~~~~I~~~PT 206 (332)
+.+++. ++|...+.++++|||+||||||++|+.+.|.|+++|..+ .+ +.|++||++.++.+|++|+|.++||
T Consensus 7 v~~l~~-~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt 85 (382)
T 2r2j_A 7 ITSLDT-ENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPT 85 (382)
T ss_dssp -CBCCT-TTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEESE
T ss_pred eEECCH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCCE
Confidence 445544 567788888999999999999999999999999999987 23 9999999999999999999999999
Q ss_pred EEEEeCCeeeee-EecccCcchhhHhHHHHH
Q psy6451 207 LTLVKDSVTKDY-IVGFTELGNCADFSTEML 236 (332)
Q Consensus 207 l~~~~~G~~v~~-~~G~~~~~~~~~f~~~~L 236 (332)
+++|++|+.+.+ +.|......+..|+.+.+
T Consensus 86 ~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~ 116 (382)
T 2r2j_A 86 LKLFRNGMMMKREYRGQRSVKALADYIRQQK 116 (382)
T ss_dssp EEEEETTEEEEEECCSCCSHHHHHHHHHHHH
T ss_pred EEEEeCCcEeeeeecCcchHHHHHHHHHHhc
Confidence 999999999884 889877766666655544
No 88
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.67 E-value=1.8e-16 Score=129.54 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=70.4
Q ss_pred hccCCcEEEEEecCCChhhHHHHHHHH--HHHHHcC-CceEEEEEC---cCChHHHHhCCc---ccCcEEEEE-eCCeee
Q psy6451 147 CKKSPNMVVHFYKDGSVNCKILDEHMK--TLCKKHL-ETRFIKLNV---ERAPFLTERLRI---KVIPTLTLV-KDSVTK 216 (332)
Q Consensus 147 ~~~~~~VvV~Fya~wc~~Ck~l~~~l~--~La~~~~-~v~f~kVd~---~~~~~l~~~~~I---~~~PTl~~~-~~G~~v 216 (332)
..++++|||+||++||++|+.+.|.|. +++..+. .+.|+.||+ +..+.++++|+| .++||+++| ++|+.+
T Consensus 26 ~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 26 KRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR 105 (133)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEE
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEE
Confidence 356899999999999999999999999 9999884 599999999 999999999999 999999999 899999
Q ss_pred eeEec
Q psy6451 217 DYIVG 221 (332)
Q Consensus 217 ~~~~G 221 (332)
.++.|
T Consensus 106 ~~~~g 110 (133)
T 3fk8_A 106 YTTKG 110 (133)
T ss_dssp EECCS
T ss_pred EEecC
Confidence 99988
No 89
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.66 E-value=3.3e-16 Score=140.08 Aligned_cols=100 Identities=14% Similarity=0.226 Sum_probs=85.6
Q ss_pred cccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC----ceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 133 EYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE----TRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~----v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
.+.+++ .+.|...+.++++++|+|||+||++|+.+.|.|++++..+.+ +.|++||++..+.++++|+|.++||++
T Consensus 16 ~v~~l~-~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 94 (241)
T 3idv_A 16 GVLVLN-DANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIK 94 (241)
T ss_dssp TEEEEC-TTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcEEec-ccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEE
Confidence 355554 457888888999999999999999999999999999998764 899999999999999999999999999
Q ss_pred EEeCCeeeeeEecccCcchhhHhHHH
Q psy6451 209 LVKDSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 209 ~~~~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
+|++|+.+ ++.|......+..|+.+
T Consensus 95 ~~~~g~~~-~~~g~~~~~~l~~~i~~ 119 (241)
T 3idv_A 95 ILKKGQAV-DYEGSRTQEEIVAKVRE 119 (241)
T ss_dssp EEETTEEE-ECCSCSCHHHHHHHHHH
T ss_pred EEcCCCcc-cccCcccHHHHHHHHhh
Confidence 99999988 57787666555555444
No 90
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=4.4e-17 Score=132.93 Aligned_cols=100 Identities=18% Similarity=0.317 Sum_probs=78.1
Q ss_pred CcccccCChhHHHHHhc-cCCcEEEEEecCCChhhHHHHHHHHHHHHHcC---CceEEEEECcCChHHHHhCCcccCcEE
Q psy6451 132 GEYEEIPDEKKFFDLCK-KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL---ETRFIKLNVERAPFLTERLRIKVIPTL 207 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~-~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~---~v~f~kVd~~~~~~l~~~~~I~~~PTl 207 (332)
+.+.+++. ++|...+. +++++||+||++||++|+.+.|.|++++..+. .+.|++||++..+.++++|+|.++||+
T Consensus 7 ~~v~~l~~-~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (133)
T 2dj3_A 7 GPVKVVVG-KTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTI 85 (133)
T ss_dssp CSSEECCT-TTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEE
T ss_pred CceEEEcC-CCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEE
Confidence 44555553 34544443 47999999999999999999999999999986 499999999999999999999999999
Q ss_pred EEEeCCeeee--eEe-cccCcchhhHhH
Q psy6451 208 TLVKDSVTKD--YIV-GFTELGNCADFS 232 (332)
Q Consensus 208 ~~~~~G~~v~--~~~-G~~~~~~~~~f~ 232 (332)
++|.+|..+. .+. |..+...+..|+
T Consensus 86 ~~~~~g~~~~~~~~~gg~~~~~~l~~~l 113 (133)
T 2dj3_A 86 YFAPSGDKKNPIKFEGGNRDLEHLSKFI 113 (133)
T ss_dssp EEECTTCTTSCEECCSSCCSTTHHHHHH
T ss_pred EEEeCCCcccceEecCCCcCHHHHHHHH
Confidence 9999887554 345 434444443333
No 91
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.65 E-value=3.6e-16 Score=135.62 Aligned_cols=83 Identities=11% Similarity=0.198 Sum_probs=70.9
Q ss_pred cccccCChhHHHHHhcc--CCcEEEEEec-------CCChhhHHHHHHHHHHHHHcC-----C-ceEEEEECcCChHHHH
Q psy6451 133 EYEEIPDEKKFFDLCKK--SPNMVVHFYK-------DGSVNCKILDEHMKTLCKKHL-----E-TRFIKLNVERAPFLTE 197 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~~~--~~~VvV~Fya-------~wc~~Ck~l~~~l~~La~~~~-----~-v~f~kVd~~~~~~l~~ 197 (332)
.+.++++ .+|.+.+.. +.+|||.||| +||++|+.|.|.|+++|..|. + +.|++||++.++.+++
T Consensus 19 ~vi~lt~-~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~ 97 (178)
T 3ga4_A 19 GVITVTA-DNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVK 97 (178)
T ss_dssp SEEECCT-TTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHH
T ss_pred CCEECCH-HHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHH
Confidence 3455544 467777753 5689999999 499999999999999999885 4 9999999999999999
Q ss_pred hCCcccCcEEEEEeCCeee
Q psy6451 198 RLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 198 ~~~I~~~PTl~~~~~G~~v 216 (332)
+|+|+++||+++|++|...
T Consensus 98 ~~~I~siPtl~~F~~g~~~ 116 (178)
T 3ga4_A 98 DLKLQNVPHLVVYPPAESN 116 (178)
T ss_dssp HTTCCSSCEEEEECCCCGG
T ss_pred HcCCCCCCEEEEEcCCCCC
Confidence 9999999999999988643
No 92
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.47 E-value=8.3e-18 Score=130.63 Aligned_cols=89 Identities=22% Similarity=0.366 Sum_probs=79.0
Q ss_pred HHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEeccc
Q psy6451 145 DLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFT 223 (332)
Q Consensus 145 ~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~ 223 (332)
....+++++||.||++||++|+.+.|.+++++..+++ +.|+.+|++..+.++++|+|.++||+++|++|+.+.++.|..
T Consensus 14 ~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~ 93 (106)
T 2yj7_A 14 EVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQ 93 (106)
Confidence 3346789999999999999999999999999999984 999999999999999999999999999999999999999877
Q ss_pred CcchhhHhHH
Q psy6451 224 ELGNCADFST 233 (332)
Q Consensus 224 ~~~~~~~f~~ 233 (332)
+...+.+++.
T Consensus 94 ~~~~l~~~l~ 103 (106)
T 2yj7_A 94 PKEALKERID 103 (106)
Confidence 6665555543
No 93
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.65 E-value=6.7e-16 Score=153.81 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=91.4
Q ss_pred CcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCChHHHHhCCcccCcEEEE
Q psy6451 132 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERAPFLTERLRIKVIPTLTL 209 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~~~l~~~~~I~~~PTl~~ 209 (332)
+.+.+++ ..+|...+++++++||+||||||++|+.+.|.|++++..+.+ +.|++||++..+.+|++|+|.++||+++
T Consensus 14 ~~v~~l~-~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 92 (504)
T 2b5e_A 14 SAVVKLA-TDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKI 92 (504)
T ss_dssp SSCEECC-TTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCcEECC-HHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEE
Confidence 4466664 457888899999999999999999999999999999999975 9999999999999999999999999999
Q ss_pred EeCCee--eeeEecccCcchhhHhHHHHH
Q psy6451 210 VKDSVT--KDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 210 ~~~G~~--v~~~~G~~~~~~~~~f~~~~L 236 (332)
|++|+. +.++.|......+..|+.+.+
T Consensus 93 ~~~g~~~~~~~~~G~~~~~~l~~~l~~~~ 121 (504)
T 2b5e_A 93 FKNSDVNNSIDYEGPRTAEAIVQFMIKQS 121 (504)
T ss_dssp EETTCTTCEEECCSCCSHHHHHHHHHHHT
T ss_pred EeCCccccceeecCCCCHHHHHHHHHHhc
Confidence 999997 888999887777766665543
No 94
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.64 E-value=5.3e-16 Score=153.44 Aligned_cols=96 Identities=13% Similarity=0.145 Sum_probs=85.7
Q ss_pred ChhHHHHHhccC---CcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCe
Q psy6451 139 DEKKFFDLCKKS---PNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSV 214 (332)
Q Consensus 139 ~e~~~~~~~~~~---~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~ 214 (332)
+.++|.+.+.++ +++||+||||||++|+.+.|.|++++..+.+ +.|++||++..+.+|++|+|.++||+++|++|+
T Consensus 7 ~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~g~ 86 (481)
T 3f8u_A 7 TDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGE 86 (481)
T ss_dssp CTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEEEETTE
T ss_pred cHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCc
Confidence 345788888777 9999999999999999999999999999988 999999999999999999999999999999999
Q ss_pred eeeeEecccCcchhhHhHHH
Q psy6451 215 TKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 215 ~v~~~~G~~~~~~~~~f~~~ 234 (332)
.+.++.|......+..|+.+
T Consensus 87 ~~~~~~G~~~~~~l~~~~~~ 106 (481)
T 3f8u_A 87 EAGAYDGPRTADGIVSHLKK 106 (481)
T ss_dssp EEEECCSCSSHHHHHHHHHH
T ss_pred eeeeecCccCHHHHHHHHHh
Confidence 99999998777666555433
No 95
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.64 E-value=1.4e-16 Score=127.71 Aligned_cols=92 Identities=14% Similarity=0.249 Sum_probs=74.1
Q ss_pred cccccCChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcC------CceEEEEECcCChHHHHhCCcccCc
Q psy6451 133 EYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL------ETRFIKLNVERAPFLTERLRIKVIP 205 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~------~v~f~kVd~~~~~~l~~~~~I~~~P 205 (332)
.+.+++. ++|...+ .+++++||+||++||++|+.+.|.|++++.+++ .+.|++||++.++ +++ +|.++|
T Consensus 8 ~v~~l~~-~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~~P 83 (121)
T 2djj_A 8 PVTVVVA-KNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQGFP 83 (121)
T ss_dssp SSEECCT-TTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSSSS
T ss_pred CeEEecc-cCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCcCC
Confidence 4455543 4555554 678999999999999999999999999999987 4899999999887 554 999999
Q ss_pred EEEEEeCCee--eeeEecccCcchh
Q psy6451 206 TLTLVKDSVT--KDYIVGFTELGNC 228 (332)
Q Consensus 206 Tl~~~~~G~~--v~~~~G~~~~~~~ 228 (332)
|+++|.+|.. +.++.|..+...+
T Consensus 84 t~~~~~~~~~~~~~~~~G~~~~~~l 108 (121)
T 2djj_A 84 TIKLYPAGAKGQPVTYSGSRTVEDL 108 (121)
T ss_dssp EEEEECSSCTTSCCCCCCCSCHHHH
T ss_pred eEEEEeCcCCCCceEecCCCCHHHH
Confidence 9999998754 6778886554443
No 96
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.64 E-value=9.2e-16 Score=147.38 Aligned_cols=102 Identities=9% Similarity=0.073 Sum_probs=84.3
Q ss_pred CCcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHH------HHHHHHHHHcCC--ceEEEEECcCChHHHHhCCcc
Q psy6451 131 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILD------EHMKTLCKKHLE--TRFIKLNVERAPFLTERLRIK 202 (332)
Q Consensus 131 ~g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~------~~l~~La~~~~~--v~f~kVd~~~~~~l~~~~~I~ 202 (332)
...+.+++. .+|.+.++++++|||+||||||++|+... |.++.+|..+.+ +.|++||++..+.+|++|+|+
T Consensus 12 ~~~v~~lt~-~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~ 90 (367)
T 3us3_A 12 VDRVINVNA-KNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLT 90 (367)
T ss_dssp CCCCEECCT-TTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCC
T ss_pred CCccEECCH-HHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCC
Confidence 344555544 47888888999999999999999974443 689999988754 999999999999999999999
Q ss_pred cCcEEEEEeCCeeeeeEecccCcchhhHhHHH
Q psy6451 203 VIPTLTLVKDSVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 203 ~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
++||+++|++|+++ .+.|......+..|+.+
T Consensus 91 ~~PTl~~f~~G~~~-~y~G~~~~~~i~~~i~~ 121 (367)
T 3us3_A 91 EEDSIYVFKEDEVI-EYDGEFSADTLVEFLLD 121 (367)
T ss_dssp STTEEEEEETTEEE-ECCSCCSHHHHHHHHHH
T ss_pred cCceEEEEECCcEE-EeCCCCCHHHHHHHHHH
Confidence 99999999999886 78888777666555544
No 97
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.1e-15 Score=143.04 Aligned_cols=100 Identities=20% Similarity=0.308 Sum_probs=83.6
Q ss_pred cccccCChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECc--CChHHHHhCCcccCcEEE
Q psy6451 133 EYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE--RAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~--~~~~l~~~~~I~~~PTl~ 208 (332)
.+.++ +.++|.+.+ +.+++|||.||||||++|+.+.|.|++++..+.+ +.|+.|+++ ..+.+|+.|+|.++||++
T Consensus 18 ~vv~l-t~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~ 96 (298)
T 3ed3_A 18 HISEL-TPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLM 96 (298)
T ss_dssp TCEEC-CHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEE
T ss_pred CeEEe-CHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEE
Confidence 34555 456788888 5678999999999999999999999999999987 899999988 689999999999999999
Q ss_pred EEeCCee-----------------eeeEecccCcchhhHhHH
Q psy6451 209 LVKDSVT-----------------KDYIVGFTELGNCADFST 233 (332)
Q Consensus 209 ~~~~G~~-----------------v~~~~G~~~~~~~~~f~~ 233 (332)
+|++|+. ...+.|......+..|+.
T Consensus 97 ~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~ 138 (298)
T 3ed3_A 97 VFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSL 138 (298)
T ss_dssp EEECCCC-------------CCCEEEECCSCCSHHHHHHHHH
T ss_pred EEECCceeecccccccccccccccceeecCCcCHHHHHHHHH
Confidence 9999973 556677766666655544
No 98
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.62 E-value=4.5e-16 Score=116.69 Aligned_cols=79 Identities=11% Similarity=0.113 Sum_probs=69.9
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHHHHcC-CceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhH
Q psy6451 152 NMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCAD 230 (332)
Q Consensus 152 ~VvV~Fya~wc~~Ck~l~~~l~~La~~~~-~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~ 230 (332)
.+||.||++||++|+.+.|.|++++.+++ ++.|+.+|++..+.++++|+|.++||+++ +|+. ++.|..+...+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~ 78 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFE 78 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHH
Confidence 46899999999999999999999999998 49999999999999999999999999998 9987 8888776666555
Q ss_pred hHHH
Q psy6451 231 FSTE 234 (332)
Q Consensus 231 f~~~ 234 (332)
++.+
T Consensus 79 ~l~~ 82 (85)
T 1nho_A 79 AIND 82 (85)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 99
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.62 E-value=4.4e-16 Score=125.85 Aligned_cols=85 Identities=15% Similarity=0.206 Sum_probs=65.9
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHc---CCceEEEEECcCC--hHHHHhCCcccCcEEEEEeCCeeeeeEeccc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKH---LETRFIKLNVERA--PFLTERLRIKVIPTLTLVKDSVTKDYIVGFT 223 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~---~~v~f~kVd~~~~--~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~ 223 (332)
+...+||.|||+||++|+.|.+.+....... ..+.+++||++.+ +.++..|+|.++||+++|++|+++.+++|+.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 4689999999999999999996543322111 1267889998875 5789999999999999999999999999998
Q ss_pred CcchhhHhHH
Q psy6451 224 ELGNCADFST 233 (332)
Q Consensus 224 ~~~~~~~f~~ 233 (332)
+...+..++.
T Consensus 97 ~~~~f~~~L~ 106 (116)
T 3dml_A 97 GEDFFWPMLA 106 (116)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 8755444433
No 100
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.61 E-value=8.6e-16 Score=115.13 Aligned_cols=79 Identities=11% Similarity=0.139 Sum_probs=69.5
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHHHHcC-CceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhh
Q psy6451 151 PNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCA 229 (332)
Q Consensus 151 ~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~-~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~ 229 (332)
.++||.||++||++|+.+.|.|++++.+++ ++.|+.+|++..+.++++|+|.++||+++ +|+. ++.|..+...+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~ 78 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALV 78 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHH
Confidence 468999999999999999999999999998 59999999999999999999999999998 9987 788876665554
Q ss_pred HhHH
Q psy6451 230 DFST 233 (332)
Q Consensus 230 ~f~~ 233 (332)
.++.
T Consensus 79 ~~l~ 82 (85)
T 1fo5_A 79 EAIK 82 (85)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 101
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.61 E-value=3.1e-15 Score=135.17 Aligned_cols=84 Identities=11% Similarity=0.134 Sum_probs=71.4
Q ss_pred CcccccCChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC----ceEEEEEC--cCChHHHHhCCcccC
Q psy6451 132 GEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE----TRFIKLNV--ERAPFLTERLRIKVI 204 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~----v~f~kVd~--~~~~~l~~~~~I~~~ 204 (332)
..+.+++.. +|...+ .+++++||+|||+||++|+.+.|.|++++..+++ +.|++||+ +.++.++++|+|.++
T Consensus 12 ~~v~~l~~~-~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 12 DPLTLLQAD-TVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp SSSEEECTT-THHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCceeCChh-hHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 345566554 555554 5669999999999999999999999999999874 99999999 778999999999999
Q ss_pred cEEEEEeCCeee
Q psy6451 205 PTLTLVKDSVTK 216 (332)
Q Consensus 205 PTl~~~~~G~~v 216 (332)
||+++|++|+..
T Consensus 91 Pt~~~~~~g~~~ 102 (244)
T 3q6o_A 91 PTVRFFXAFTXN 102 (244)
T ss_dssp SEEEEECTTCCS
T ss_pred CEEEEEeCCCcC
Confidence 999999986544
No 102
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.60 E-value=6.6e-15 Score=141.39 Aligned_cols=166 Identities=10% Similarity=0.101 Sum_probs=123.0
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhH------HHHHHHHHhhh--hceeeecccCCCCcccccCCCC
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILD------EHMKTLCKKHL--ETRFIKLNVERAPFLTGQQGHG 132 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~------~~l~~LA~~~~--~~~f~kvd~~k~pfl~~k~g~g 132 (332)
...|.+++ +.+|.+++++...|||+||||||++|+... +.++.+|..+. .+.|++||+...+-++.+.|..
T Consensus 12 ~~~v~~lt-~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~ 90 (367)
T 3us3_A 12 VDRVINVN-AKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLT 90 (367)
T ss_dssp CCCCEECC-TTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCC
T ss_pred CCccEECC-HHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCC
Confidence 35688885 679999999899999999999999974433 68888888764 4889999998865444443322
Q ss_pred -----------------------------------cccccCChhHHHHHhc-cCCcEEEEEecCCChhhHHHHHHHHHHH
Q psy6451 133 -----------------------------------EYEEIPDEKKFFDLCK-KSPNMVVHFYKDGSVNCKILDEHMKTLC 176 (332)
Q Consensus 133 -----------------------------------~~~ei~~e~~~~~~~~-~~~~VvV~Fya~wc~~Ck~l~~~l~~La 176 (332)
.+.++++..++...+. +...++|-||++||. .+.+.|.++|
T Consensus 91 ~~PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A 167 (367)
T 3us3_A 91 EEDSIYVFKEDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAA 167 (367)
T ss_dssp STTEEEEEETTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHH
T ss_pred cCceEEEEECCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHH
Confidence 2345667788888887 678999999999876 4667889999
Q ss_pred HHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCe-eeeeEec-ccCcchhhHhHHH
Q psy6451 177 KKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSV-TKDYIVG-FTELGNCADFSTE 234 (332)
Q Consensus 177 ~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~-~v~~~~G-~~~~~~~~~f~~~ 234 (332)
..+.+ +.|+.+. .+.++++|++.. |||++|+.+. ....+.| ......+..|+..
T Consensus 168 ~~~~~~~~F~~~~---~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~ 224 (367)
T 3us3_A 168 EEFHPYIPFFATF---DSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEE 224 (367)
T ss_dssp HHHTTTSCEEEEC---CHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCHHHHHHHHHH
T ss_pred HhhcCCcEEEEEC---CHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHH
Confidence 99865 8998874 457899999985 9999998742 2233445 2344444455443
No 103
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.60 E-value=5.8e-15 Score=140.52 Aligned_cols=165 Identities=12% Similarity=0.160 Sum_probs=123.9
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHH-------HHHHHHhhh--hceeeecccCCCCcccccCCC
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEH-------MKTLCKKHL--ETRFIKLNVERAPFLTGQQGH 131 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~-------l~~LA~~~~--~~~f~kvd~~k~pfl~~k~g~ 131 (332)
.+.|.+++ +++|.++++++.+++|.||||||+ |+.+.|. |.++|..+. ++.|+++|+...+-++.+.|.
T Consensus 10 ~~~v~~l~-~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v 87 (350)
T 1sji_A 10 KDRVVSLT-EKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGF 87 (350)
T ss_dssp CCCCEEEC-HHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTC
T ss_pred CCccEECC-HHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCC
Confidence 34688885 689999999889999999999999 9999898 899998875 488999999875433333221
Q ss_pred C-----------------------------------cccccCChhHHHHHhc-cCCcEEEEEecCCChhhHHHHHHHHHH
Q psy6451 132 G-----------------------------------EYEEIPDEKKFFDLCK-KSPNMVVHFYKDGSVNCKILDEHMKTL 175 (332)
Q Consensus 132 g-----------------------------------~~~ei~~e~~~~~~~~-~~~~VvV~Fya~wc~~Ck~l~~~l~~L 175 (332)
. .+.++++.+++...+. +...++|.||++||.+ ..+.+.++
T Consensus 88 ~~~Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~---~~~~~~~~ 164 (350)
T 1sji_A 88 DEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESE---YYKAFEEA 164 (350)
T ss_dssp CSTTEEEEEETTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSH---HHHHHHHH
T ss_pred CccceEEEEECCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcH---HHHHHHHH
Confidence 1 2445667788888887 7788999999998754 46889999
Q ss_pred HHHcC-CceEEEEECcCChHHHHhCCcccCcEEEEEeCC-eeeeeEecc-cCcchhhHhHHH
Q psy6451 176 CKKHL-ETRFIKLNVERAPFLTERLRIKVIPTLTLVKDS-VTKDYIVGF-TELGNCADFSTE 234 (332)
Q Consensus 176 a~~~~-~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G-~~v~~~~G~-~~~~~~~~f~~~ 234 (332)
|..+. .+.|+.+ .++.++++|++. .||+++|+.+ +....+.|- .....+..|+..
T Consensus 165 A~~~~~~~~f~~~---~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~ 222 (350)
T 1sji_A 165 AEHFQPYIKFFAT---FDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKE 222 (350)
T ss_dssp HHHTTTTSEEEEE---CCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHH
T ss_pred HHhhccCcEEEEE---CCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHH
Confidence 99984 4889887 356789999999 9999999863 333345553 344444444443
No 104
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.59 E-value=1.5e-15 Score=123.04 Aligned_cols=82 Identities=13% Similarity=0.169 Sum_probs=72.8
Q ss_pred cccCChhHHHHHhcc--CCcEEEEEecC-------CChhhHHHHHHHHHHHHHcC-CceEEEEEC-------cCChHHHH
Q psy6451 135 EEIPDEKKFFDLCKK--SPNMVVHFYKD-------GSVNCKILDEHMKTLCKKHL-ETRFIKLNV-------ERAPFLTE 197 (332)
Q Consensus 135 ~ei~~e~~~~~~~~~--~~~VvV~Fya~-------wc~~Ck~l~~~l~~La~~~~-~v~f~kVd~-------~~~~~l~~ 197 (332)
..+.+.++|...+.. +++|||+||++ ||++|+.+.|.|++++.+++ ++.|++||+ +..+.++.
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~ 86 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRK 86 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHH
Confidence 345677788888865 89999999999 99999999999999999997 599999999 78899999
Q ss_pred hCCcccCcEEEEEeCCeee
Q psy6451 198 RLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 198 ~~~I~~~PTl~~~~~G~~v 216 (332)
+|+|.++||+++|++|..+
T Consensus 87 ~~~i~~~Pt~~~~~~~~~~ 105 (123)
T 1wou_A 87 NLKVTAVPTLLKYGTPQKL 105 (123)
T ss_dssp HHCCCSSSEEEETTSSCEE
T ss_pred HCCCCeeCEEEEEcCCceE
Confidence 9999999999999885433
No 105
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=4.1e-15 Score=120.65 Aligned_cols=81 Identities=15% Similarity=0.200 Sum_probs=70.3
Q ss_pred ccCCcEEEEEecCCChhhHHHHHHH---HHHHHHcC-CceEEEEECc--CChHHHHhCCcccCcEEEEE-eCCeeeeeEe
Q psy6451 148 KKSPNMVVHFYKDGSVNCKILDEHM---KTLCKKHL-ETRFIKLNVE--RAPFLTERLRIKVIPTLTLV-KDSVTKDYIV 220 (332)
Q Consensus 148 ~~~~~VvV~Fya~wc~~Ck~l~~~l---~~La~~~~-~v~f~kVd~~--~~~~l~~~~~I~~~PTl~~~-~~G~~v~~~~ 220 (332)
.+++++||.||++||++|+.+.|.+ ..++..+. .+.++.||++ ..+.+++.|+|.++||+++| ++|+.+.++.
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~ 104 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLV 104 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEE
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEec
Confidence 4689999999999999999999999 77776654 3899999998 47789999999999999999 7999999999
Q ss_pred cccCcchh
Q psy6451 221 GFTELGNC 228 (332)
Q Consensus 221 G~~~~~~~ 228 (332)
|..+...+
T Consensus 105 G~~~~~~l 112 (130)
T 2kuc_A 105 GAEDAPEL 112 (130)
T ss_dssp SCCCHHHH
T ss_pred CCCCHHHH
Confidence 98765443
No 106
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.59 E-value=1.7e-15 Score=144.22 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=82.9
Q ss_pred CcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHH-------HHHHHHHcC--CceEEEEECcCChHHHHhCCcc
Q psy6451 132 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEH-------MKTLCKKHL--ETRFIKLNVERAPFLTERLRIK 202 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~-------l~~La~~~~--~v~f~kVd~~~~~~l~~~~~I~ 202 (332)
+.+.+++ ..+|.+.+.++++|||+||||||+ |+.+.|. |+++|..+. ++.|++||++..+.+|++|+|.
T Consensus 11 ~~v~~l~-~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 88 (350)
T 1sji_A 11 DRVVSLT-EKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD 88 (350)
T ss_dssp CCCEEEC-HHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC
T ss_pred CccEECC-HHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC
Confidence 3455554 567889998899999999999999 9988888 899998876 4999999999999999999999
Q ss_pred cCcEEEEEeCCeeeeeEecccCcchhhHhH
Q psy6451 203 VIPTLTLVKDSVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 203 ~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~ 232 (332)
++||+++|++|+ +..+.|..+...+..|+
T Consensus 89 ~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i 117 (350)
T 1sji_A 89 EEGSLYVLKGDR-TIEFDGEFAADVLVEFL 117 (350)
T ss_dssp STTEEEEEETTE-EEEECSCCCHHHHHHHH
T ss_pred ccceEEEEECCc-EEEecCCCCHHHHHHHH
Confidence 999999999999 55788877665554443
No 107
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.57 E-value=3.8e-15 Score=128.06 Aligned_cols=81 Identities=9% Similarity=-0.017 Sum_probs=70.2
Q ss_pred hHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCC---cccCcEEEEEeC-Ce
Q psy6451 141 KKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLR---IKVIPTLTLVKD-SV 214 (332)
Q Consensus 141 ~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~---I~~~PTl~~~~~-G~ 214 (332)
+++...+. +++++||.|||+|||+|+.+.|.|++++..++++.|+.|+++.++.++..|. +.++||+++|++ |+
T Consensus 43 ~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~ 122 (167)
T 1z6n_A 43 SALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFN 122 (167)
T ss_dssp HHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCC
T ss_pred HHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCC
Confidence 34444443 4688999999999999999999999999999999999999999999999997 999999999986 58
Q ss_pred eeeeEec
Q psy6451 215 TKDYIVG 221 (332)
Q Consensus 215 ~v~~~~G 221 (332)
.+.++.|
T Consensus 123 ~~~~~g~ 129 (167)
T 1z6n_A 123 LLGRFVE 129 (167)
T ss_dssp EEEEEES
T ss_pred EEEEEcC
Confidence 8877744
No 108
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.57 E-value=9.3e-15 Score=120.25 Aligned_cols=96 Identities=10% Similarity=0.144 Sum_probs=82.0
Q ss_pred ChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCccc--CcEEEEEeC--C
Q psy6451 139 DEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKV--IPTLTLVKD--S 213 (332)
Q Consensus 139 ~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~--~PTl~~~~~--G 213 (332)
+..+|...+++..+|+|+||++ |++|+.+.|.|+++|++|.+ +.|++||++.++.+++.|+|++ +||+++|++ |
T Consensus 12 t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~~~g 90 (133)
T 2djk_A 12 GPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVAKN 90 (133)
T ss_dssp CHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEECTTTC
T ss_pred ChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEEecCcC
Confidence 4456777788889999999999 89999999999999999986 9999999999999999999999 999999997 7
Q ss_pred eeeeeEe--cccCcchhhHhHHHHH
Q psy6451 214 VTKDYIV--GFTELGNCADFSTEML 236 (332)
Q Consensus 214 ~~v~~~~--G~~~~~~~~~f~~~~L 236 (332)
+. .++. |..+...+..|+.+.+
T Consensus 91 ~~-~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 91 QK-FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp CB-CCCCSSSCCCHHHHHHHHHHHH
T ss_pred cc-cCCCCccccCHHHHHHHHHHHH
Confidence 66 4655 7766666666665544
No 109
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.57 E-value=4e-15 Score=127.03 Aligned_cols=92 Identities=16% Similarity=0.264 Sum_probs=75.3
Q ss_pred ccCCcEEEEEecCCChhhHHHHHHH---HHHHHHcC-CceEEEEECcCChHH--------------------------HH
Q psy6451 148 KKSPNMVVHFYKDGSVNCKILDEHM---KTLCKKHL-ETRFIKLNVERAPFL--------------------------TE 197 (332)
Q Consensus 148 ~~~~~VvV~Fya~wc~~Ck~l~~~l---~~La~~~~-~v~f~kVd~~~~~~l--------------------------~~ 197 (332)
.++++|||+|||+||++|+.|.+.+ ..+.+.+. ++.|+.||++..+.+ +.
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQRV 124 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHHHH
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHHHH
Confidence 6789999999999999999985544 55555554 499999999887654 78
Q ss_pred hCCcccCcEEEEE-eCCeeeeeEecccC-cchhhHhHHHHHHHH
Q psy6451 198 RLRIKVIPTLTLV-KDSVTKDYIVGFTE-LGNCADFSTEMLEWR 239 (332)
Q Consensus 198 ~~~I~~~PTl~~~-~~G~~v~~~~G~~~-~~~~~~f~~~~Le~~ 239 (332)
.|+|.++||+++| ++|+++.++.|..+ ...+..++.+.|+..
T Consensus 125 ~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~~ 168 (172)
T 3f9u_A 125 KFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLENY 168 (172)
T ss_dssp HHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHHH
T ss_pred HcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999 79999999999987 766666766666543
No 110
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.32 E-value=3.2e-16 Score=127.36 Aligned_cols=91 Identities=12% Similarity=0.116 Sum_probs=76.7
Q ss_pred HHHHHhccCCcEEEEEecCCChhhHHHHHHH---HHHHHHcCC-ceEEEEEC--cCChHHHHhCCcccCcEEEEE--eCC
Q psy6451 142 KFFDLCKKSPNMVVHFYKDGSVNCKILDEHM---KTLCKKHLE-TRFIKLNV--ERAPFLTERLRIKVIPTLTLV--KDS 213 (332)
Q Consensus 142 ~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l---~~La~~~~~-v~f~kVd~--~~~~~l~~~~~I~~~PTl~~~--~~G 213 (332)
.+.....+++++||+||++||++|+.+.|.+ ..+++.+.. +.|+.||+ +..+.+++.|+|.++||+++| ++|
T Consensus 11 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G 90 (130)
T 2lst_A 11 ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAG 90 (130)
Confidence 3444456789999999999999999999999 999988876 89999998 466889999999999999999 789
Q ss_pred ee--eeeEecccCcchhhHhH
Q psy6451 214 VT--KDYIVGFTELGNCADFS 232 (332)
Q Consensus 214 ~~--v~~~~G~~~~~~~~~f~ 232 (332)
++ +.++.|..+...+..++
T Consensus 91 ~~~~~~~~~G~~~~~~l~~~l 111 (130)
T 2lst_A 91 AWEEVGRLFGSRPRAEFLKEL 111 (130)
Confidence 99 89999977655544443
No 111
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.53 E-value=2.6e-14 Score=120.37 Aligned_cols=78 Identities=10% Similarity=0.257 Sum_probs=68.5
Q ss_pred HHhccCCcEEEEEe-cCCChhhHHHHHHH---HHHHHHc-CCceEEEEECcCCh-----------HHHHhCCcccCcEEE
Q psy6451 145 DLCKKSPNMVVHFY-KDGSVNCKILDEHM---KTLCKKH-LETRFIKLNVERAP-----------FLTERLRIKVIPTLT 208 (332)
Q Consensus 145 ~~~~~~~~VvV~Fy-a~wc~~Ck~l~~~l---~~La~~~-~~v~f~kVd~~~~~-----------~l~~~~~I~~~PTl~ 208 (332)
....++++|||+|| ++||++|+.+.|.+ .+++..+ .++.++.||++..+ .+++.|+|.++||++
T Consensus 42 ~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~ 121 (154)
T 2ju5_A 42 HSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELV 121 (154)
T ss_dssp HHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEE
T ss_pred HHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEE
Confidence 33356899999999 99999999999999 7887665 45999999998764 789999999999999
Q ss_pred EE-eCCeeeeeEeccc
Q psy6451 209 LV-KDSVTKDYIVGFT 223 (332)
Q Consensus 209 ~~-~~G~~v~~~~G~~ 223 (332)
+| ++|+++.++ |..
T Consensus 122 ~~d~~G~~~~~~-G~~ 136 (154)
T 2ju5_A 122 FIDAEGKQLARM-GFE 136 (154)
T ss_dssp EECTTCCEEEEE-CCC
T ss_pred EEcCCCCEEEEe-cCC
Confidence 99 799999999 987
No 112
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.53 E-value=3.4e-15 Score=127.42 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=72.5
Q ss_pred hhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChH-HHHhCCc--ccCcEEEEE-eCCe
Q psy6451 140 EKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPF-LTERLRI--KVIPTLTLV-KDSV 214 (332)
Q Consensus 140 e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~-l~~~~~I--~~~PTl~~~-~~G~ 214 (332)
++.|.....++++|||+||++||++|+.+.|.|.+++..+.. +.|+.|+++..+. ++..|++ .++||+++| ++|+
T Consensus 36 ~~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 36 EDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGK 115 (164)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSC
T ss_pred HHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCC
Confidence 355666677899999999999999999999999998776643 8889999888776 7888888 669999999 7999
Q ss_pred eeeeEecccC
Q psy6451 215 TKDYIVGFTE 224 (332)
Q Consensus 215 ~v~~~~G~~~ 224 (332)
++.++.|...
T Consensus 116 ~~~~~~G~~~ 125 (164)
T 1sen_A 116 VHPEIINENG 125 (164)
T ss_dssp BCTTCCCTTS
T ss_pred EEEEEeCCCC
Confidence 9999999643
No 113
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.53 E-value=8.7e-15 Score=123.78 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=68.4
Q ss_pred ccccCCh-hHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHH--HcCCceEEEEECc-CChHHHHhCCcccCcEEEE
Q psy6451 134 YEEIPDE-KKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCK--KHLETRFIKLNVE-RAPFLTERLRIKVIPTLTL 209 (332)
Q Consensus 134 ~~ei~~e-~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~--~~~~v~f~kVd~~-~~~~l~~~~~I~~~PTl~~ 209 (332)
+....+- +.+.....++++|||+|||+||++|+.|.|.+..... .+....|+.|+++ ....++..|++.++||+++
T Consensus 27 i~W~~~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f 106 (151)
T 3ph9_A 27 ITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMF 106 (151)
T ss_dssp SCCCSSHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEE
T ss_pred CcchhCHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEE
Confidence 3343333 3344555778999999999999999999999986532 2333457777775 3456788999999999999
Q ss_pred Ee-CCeeeeeEecc
Q psy6451 210 VK-DSVTKDYIVGF 222 (332)
Q Consensus 210 ~~-~G~~v~~~~G~ 222 (332)
|. +|+++.+++|.
T Consensus 107 ~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 107 VDPSLTVRADIAGR 120 (151)
T ss_dssp ECTTSCBCTTCCCS
T ss_pred ECCCCCEEEEEeCC
Confidence 98 99999999998
No 114
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.53 E-value=3e-14 Score=126.50 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=81.2
Q ss_pred ChhHHHHHh---ccCCcEEEEEecC-CChhhHHHHHHHHHHHHHcCCceEEEEECcC--ChHHHHhCCcccCcEEEEEeC
Q psy6451 139 DEKKFFDLC---KKSPNMVVHFYKD-GSVNCKILDEHMKTLCKKHLETRFIKLNVER--APFLTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 139 ~e~~~~~~~---~~~~~VvV~Fya~-wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~--~~~l~~~~~I~~~PTl~~~~~ 212 (332)
+.+++.+.+ .++..+||.||++ ||++|+.+.|.|+++++.++.+.|++||++. .+.++++|+|.++||+++|++
T Consensus 8 ~~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~ 87 (226)
T 1a8l_A 8 DKKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQD 87 (226)
T ss_dssp HHHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEET
T ss_pred HHHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcC
Confidence 344555555 2346678999999 9999999999999999877779999999999 999999999999999999999
Q ss_pred Ceee-eeEecccCcchhhHhHHHHH
Q psy6451 213 SVTK-DYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 213 G~~v-~~~~G~~~~~~~~~f~~~~L 236 (332)
|+.. .++.|......+..|+...+
T Consensus 88 g~~~~~~~~G~~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 88 GKDFGVRYFGLPAGHEFAAFLEDIV 112 (226)
T ss_dssp TBCCSEEEESCCCTTHHHHHHHHHH
T ss_pred CceeeEEEeccCcHHHHHHHHHHHH
Confidence 9875 78889877666666655543
No 115
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.53 E-value=7.2e-15 Score=116.73 Aligned_cols=69 Identities=12% Similarity=0.029 Sum_probs=57.1
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc------CChHHHHhCCcccCcEEEEEeCCeeeeeEeccc
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE------RAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFT 223 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~------~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~ 223 (332)
++++||.||||||++|+.+.|.|++++..++ .|+++ ..+.++++|+|+++||+++ +|+. +.|..
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~~---~~G~~ 81 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT---YTGVR 81 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTEE---EESCC
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-----EEEEecccccchhHHHHHHcCCeEeCEEEE--CCEE---ecCCC
Confidence 4667999999999999999999999998775 45555 6789999999999999777 8874 77776
Q ss_pred Ccchh
Q psy6451 224 ELGNC 228 (332)
Q Consensus 224 ~~~~~ 228 (332)
+...+
T Consensus 82 ~~~~l 86 (106)
T 3kp8_A 82 SLEAL 86 (106)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 65443
No 116
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.51 E-value=1e-13 Score=137.08 Aligned_cols=141 Identities=13% Similarity=0.159 Sum_probs=114.9
Q ss_pred ceEecCCchhhhhhhcCC---CcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCC------
Q psy6451 63 EYEEIPDEKKFFDLCKKS---PNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHG------ 132 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~~~---~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g------ 132 (332)
.|.+|+ +++|.+.+.+. .++||+||+|||++|+.+.|.|.++|..+.+ +.|+++|+...+-++.+.|..
T Consensus 2 ~v~~l~-~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~ 80 (481)
T 3f8u_A 2 DVLELT-DDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLK 80 (481)
T ss_dssp CCEEEC-TTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEE
T ss_pred ceEEec-HHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 467784 68999999777 8999999999999999999999999999987 889999998865555444322
Q ss_pred ------------------------------cccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcC-C
Q psy6451 133 ------------------------------EYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-E 181 (332)
Q Consensus 133 ------------------------------~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~-~ 181 (332)
.+.++.+.+++...+..+..++|-||.++|..| .+.|..+|..+. .
T Consensus 81 ~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~~ 157 (481)
T 3f8u_A 81 IFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEA---HSEFLKAASNLRDN 157 (481)
T ss_dssp EEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHH---HHHHHHHHHHHTTT
T ss_pred EEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccch---HHHHHHHHHHhccC
Confidence 234566788888888889999999999987755 567889999884 4
Q ss_pred ceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 182 TRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 182 v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
+.|+.+ ..+.++++|++...| +++|+
T Consensus 158 ~~F~~~---~~~~~~~~~~v~~~~-i~~~~ 183 (481)
T 3f8u_A 158 YRFAHT---NVESLVNEYDDNGEG-IILFR 183 (481)
T ss_dssp SCEEEE---CCHHHHHHHCSSSEE-EEEEC
T ss_pred ceEEEE---CCHHHHHHhCCCCCc-EEEEe
Confidence 889875 456789999998866 78887
No 117
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.50 E-value=8.4e-14 Score=112.78 Aligned_cols=81 Identities=9% Similarity=0.202 Sum_probs=71.5
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcC----------------------ChHHHHhCCcccCcE
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVER----------------------APFLTERLRIKVIPT 206 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~----------------------~~~l~~~~~I~~~PT 206 (332)
+++++||.||++||++|+.+.|.|.+++.+++++.|+.|+++. ...+++.|++.++||
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~ 102 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPA 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCE
Confidence 5689999999999999999999999999999999999999977 677899999999999
Q ss_pred EEEE-eCCeeeeeEe---cccCcchhhH
Q psy6451 207 LTLV-KDSVTKDYIV---GFTELGNCAD 230 (332)
Q Consensus 207 l~~~-~~G~~v~~~~---G~~~~~~~~~ 230 (332)
++++ ++|+++ ++. |..+...+..
T Consensus 103 ~~lid~~G~i~-~~~~~~g~~~~~~l~~ 129 (136)
T 1lu4_A 103 FVFYRADGTST-FVNNPTAAMSQDELSG 129 (136)
T ss_dssp EEEECTTSCEE-EECCSSSCCCHHHHHH
T ss_pred EEEECCCCcEE-EEEcCCCccCHHHHHH
Confidence 9999 699999 888 7665444433
No 118
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.49 E-value=6.5e-14 Score=140.48 Aligned_cols=101 Identities=9% Similarity=0.056 Sum_probs=79.6
Q ss_pred cccccCChhHHHHHh-ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC----ceEEEEECc--CChHHHHhCCcccCc
Q psy6451 133 EYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE----TRFIKLNVE--RAPFLTERLRIKVIP 205 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~-~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~----v~f~kVd~~--~~~~l~~~~~I~~~P 205 (332)
.+.+++.+ +|...+ .++++|||+|||+||++|+.+.|.|++++.++.+ +.|++||++ .++.++++|+|.++|
T Consensus 13 ~V~~Lt~~-~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~P 91 (519)
T 3t58_A 13 PLTLLDAD-SVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFP 91 (519)
T ss_dssp SSEEECTT-THHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBS
T ss_pred CcEECChH-HHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccC
Confidence 45555544 566655 6679999999999999999999999999999875 999999995 589999999999999
Q ss_pred EEEEEeC----CeeeeeEecccCcchhhHhHHH
Q psy6451 206 TLTLVKD----SVTKDYIVGFTELGNCADFSTE 234 (332)
Q Consensus 206 Tl~~~~~----G~~v~~~~G~~~~~~~~~f~~~ 234 (332)
|+++|.+ |+.+....|..+...+.+++.+
T Consensus 92 Tl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~ 124 (519)
T 3t58_A 92 TVRFFQAFTKNGSGATLPGAGANVQTLRMRLID 124 (519)
T ss_dssp EEEEECTTCCSCCCEEECCSSCCHHHHHHHHHH
T ss_pred EEEEEcCcccCCCceeEecCCCCHHHHHHHHHH
Confidence 9999984 5555666665554444444433
No 119
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.49 E-value=6.6e-14 Score=127.67 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=77.8
Q ss_pred ccccCChhHHHHHhccCCcEEEEEe--cCCChhhHHHHHHHHHHHHHc----CCceEEEEECcC-----ChHHHHhCCcc
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFY--KDGSVNCKILDEHMKTLCKKH----LETRFIKLNVER-----APFLTERLRIK 202 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fy--a~wc~~Ck~l~~~l~~La~~~----~~v~f~kVd~~~-----~~~l~~~~~I~ 202 (332)
+.+++ ..+|.+++.++++|||.|| ||||+ |.|.|++||..+ +.+.|++||++. ++.+|++|+|.
T Consensus 18 v~~Lt-~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~ 92 (248)
T 2c0g_A 18 CVDLD-ELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVD 92 (248)
T ss_dssp CEECC-TTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCC
T ss_pred cEECC-HHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCC
Confidence 44444 4578888888899999999 99999 999999999987 359999999998 89999999999
Q ss_pred --cCcEEEEEeCCee--eeeE--ecccCcchhhHhHHH
Q psy6451 203 --VIPTLTLVKDSVT--KDYI--VGFTELGNCADFSTE 234 (332)
Q Consensus 203 --~~PTl~~~~~G~~--v~~~--~G~~~~~~~~~f~~~ 234 (332)
++||+++|+ |+. ...+ .|..+...+..|+.+
T Consensus 93 ~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~ 129 (248)
T 2c0g_A 93 DKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSA 129 (248)
T ss_dssp TTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHH
T ss_pred cCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHH
Confidence 999999999 983 4556 676665555444443
No 120
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.49 E-value=9.3e-14 Score=126.13 Aligned_cols=97 Identities=14% Similarity=0.210 Sum_probs=80.1
Q ss_pred ccccCChhHHHHHhccCCcEEEEEec--CCChhhHHHHHHHHHHHHHcC---CceEEEEECc-----CChHHHHhCCcc-
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYK--DGSVNCKILDEHMKTLCKKHL---ETRFIKLNVE-----RAPFLTERLRIK- 202 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya--~wc~~Ck~l~~~l~~La~~~~---~v~f~kVd~~-----~~~~l~~~~~I~- 202 (332)
+.+++ ..+|..++.++++|||.||| |||+ +.|.|+++|..+. .+.|++||++ .++.+|++|+|.
T Consensus 7 v~~Lt-~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~ 81 (240)
T 2qc7_A 7 ALPLD-TVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDK 81 (240)
T ss_dssp CEECC-TTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCG
T ss_pred ceECC-HHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCC
Confidence 34444 45788888888999999999 9999 9999999999984 4999999954 589999999999
Q ss_pred -cCcEEEEEeCCe--eeeeEecccCcchhhHhHHHH
Q psy6451 203 -VIPTLTLVKDSV--TKDYIVGFTELGNCADFSTEM 235 (332)
Q Consensus 203 -~~PTl~~~~~G~--~v~~~~G~~~~~~~~~f~~~~ 235 (332)
++||+++|++|+ ...++.|..+...+..|+.+.
T Consensus 82 ~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 82 ESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp GGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred CCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 999999999998 466788877766655555443
No 121
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.49 E-value=1.8e-13 Score=112.31 Aligned_cols=83 Identities=12% Similarity=0.216 Sum_probs=72.4
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEEC---------------------------cCChHHHHhCC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNV---------------------------ERAPFLTERLR 200 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~---------------------------~~~~~l~~~~~ 200 (332)
+++++||.||++||++|+.+.|.|.+++.+|++ +.|+.|++ +....+++.|+
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFE 107 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhC
Confidence 678999999999999999999999999999988 99999995 44567899999
Q ss_pred cccCcEEEEE-eCCeeeeeEecccCcchhhHh
Q psy6451 201 IKVIPTLTLV-KDSVTKDYIVGFTELGNCADF 231 (332)
Q Consensus 201 I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f 231 (332)
|.++||++++ ++|+++.++.|..+...+..+
T Consensus 108 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 139 (148)
T 2b5x_A 108 NEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKR 139 (148)
T ss_dssp CCCSSEEEEECTTCBEEEEEESCSTTHHHHHH
T ss_pred CCCCCEEEEECCCCcEEEEecCCCCHHHHHHH
Confidence 9999999999 799999999997665444333
No 122
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.49 E-value=1.1e-13 Score=119.64 Aligned_cols=98 Identities=12% Similarity=0.085 Sum_probs=76.0
Q ss_pred CCCcccccCCCCcccccCC-hhHHHHHhccCCcEEEEEecCCChhhHHHHHH-H--HHHHHHcC-CceEEEEECcCChHH
Q psy6451 121 RAPFLTGQQGHGEYEEIPD-EKKFFDLCKKSPNMVVHFYKDGSVNCKILDEH-M--KTLCKKHL-ETRFIKLNVERAPFL 195 (332)
Q Consensus 121 k~pfl~~k~g~g~~~ei~~-e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~-l--~~La~~~~-~v~f~kVd~~~~~~l 195 (332)
.+|++.+ ..+..+..... ++.|.....++++|||+|||+||++|+.|.|. + .++++.+. .+.+++||.++.+.+
T Consensus 10 ~spyl~~-ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l 88 (173)
T 3ira_A 10 KSPYLLQ-HAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDI 88 (173)
T ss_dssp CCHHHHT-TTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHH
T ss_pred CCHHHHh-ccCCCCCCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcH
Confidence 3444433 22333444443 66777777889999999999999999999993 3 46666554 389999999999999
Q ss_pred HHhC--------CcccCcEEEEEe-CCeeeeeE
Q psy6451 196 TERL--------RIKVIPTLTLVK-DSVTKDYI 219 (332)
Q Consensus 196 ~~~~--------~I~~~PTl~~~~-~G~~v~~~ 219 (332)
++.| ++.++||+++|. +|+++...
T Consensus 89 ~~~y~~~~q~~~gv~g~Pt~v~l~~dG~~v~~~ 121 (173)
T 3ira_A 89 DNIYMTVCQIILGRGGWPLNIIMTPGKKPFFAG 121 (173)
T ss_dssp HHHHHHHHHHHHSCCCSSEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcceeeECCCCCceeee
Confidence 9988 999999999996 99998763
No 123
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.49 E-value=6e-14 Score=103.31 Aligned_cols=68 Identities=21% Similarity=0.323 Sum_probs=59.7
Q ss_pred EEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEeccc-Ccch
Q psy6451 153 MVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFT-ELGN 227 (332)
Q Consensus 153 VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~-~~~~ 227 (332)
..|.||++||++|+.+.|.+++++..+.. +.+++|| .+.++++|+|.++||+++ +|+.+.+ |.. +...
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~ 71 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEE 71 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHH
Confidence 46899999999999999999999999874 8999998 788999999999999998 9998876 765 4433
No 124
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.48 E-value=1.9e-13 Score=110.35 Aligned_cols=82 Identities=11% Similarity=0.113 Sum_probs=71.3
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcC-----------------------ChHHHHhCCcccCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVER-----------------------APFLTERLRIKVIP 205 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~-----------------------~~~l~~~~~I~~~P 205 (332)
+++++||+||++||++|+.+.|.|.+++.+++++.|+.|+++. ...++..|+|.++|
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P 103 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQP 103 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCc
Confidence 5689999999999999999999999999999999999999853 56789999999999
Q ss_pred EEEEE-eCCeeeeeEecccCcchhhHh
Q psy6451 206 TLTLV-KDSVTKDYIVGFTELGNCADF 231 (332)
Q Consensus 206 Tl~~~-~~G~~v~~~~G~~~~~~~~~f 231 (332)
|++++ ++|+++ ++.|..+...+..+
T Consensus 104 ~~~~id~~g~i~-~~~g~~~~~~l~~~ 129 (136)
T 1zzo_A 104 AYAFVDPHGNVD-VVRGRMSQDELTRR 129 (136)
T ss_dssp EEEEECTTCCEE-EEESCCCHHHHHHH
T ss_pred eEEEECCCCCEE-EEecCCCHHHHHHH
Confidence 99999 599999 99997665444333
No 125
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.47 E-value=1.5e-13 Score=132.44 Aligned_cols=164 Identities=9% Similarity=0.135 Sum_probs=100.5
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-------hceeeecccCCCCcccccCCCCc
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-------ETRFIKLNVERAPFLTGQQGHGE 133 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-------~~~f~kvd~~k~pfl~~k~g~g~ 133 (332)
.+.|.+|+ .++|.++++++.++||+||+|||++|+.+.|.|.++|..+. .+.|+++|+...+-++.+.+...
T Consensus 4 ~~~v~~l~-~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~ 82 (382)
T 2r2j_A 4 GSEITSLD-TENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK 82 (382)
T ss_dssp ----CBCC-TTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE
T ss_pred CCceEECC-HHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc
Confidence 35678885 58899999888999999999999999999999999999872 28899999987554444333211
Q ss_pred -------------------------------------ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHH
Q psy6451 134 -------------------------------------YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLC 176 (332)
Q Consensus 134 -------------------------------------~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La 176 (332)
+.++++..++.. +..+..++|.||++++.++ .+.|..+|
T Consensus 83 ~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~---~~~f~~~A 158 (382)
T 2r2j_A 83 YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDN---YRVFERVA 158 (382)
T ss_dssp ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHH---HHHHHHHH
T ss_pred CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChh---HHHHHHHH
Confidence 223434445555 5667888999999987664 56788999
Q ss_pred HHcCC-ceEEEEECcCChHHHHhCCcccCcEEEEEeCCe--eeeeEeccc-CcchhhHhHHH
Q psy6451 177 KKHLE-TRFIKLNVERAPFLTERLRIKVIPTLTLVKDSV--TKDYIVGFT-ELGNCADFSTE 234 (332)
Q Consensus 177 ~~~~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~--~v~~~~G~~-~~~~~~~f~~~ 234 (332)
..+.+ +.|+.+..+ ++..+++.+.| ++++..|. ....+.|-. ....+..|+..
T Consensus 159 ~~~~~~~~F~~~~~~----~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~ 215 (382)
T 2r2j_A 159 NILHDDCAFLSAFGD----VSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQD 215 (382)
T ss_dssp HHHTTTCEEEEEESC----C--------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHH
T ss_pred HHhhccceEEEEehh----hHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHh
Confidence 98855 888776662 46789999999 55444422 223345543 45556666553
No 126
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.47 E-value=3.2e-14 Score=140.32 Aligned_cols=95 Identities=15% Similarity=0.214 Sum_probs=77.5
Q ss_pred CcccccCChhHHHHHhcc--CCcEEEEEecCCChhhHHHHHHHHHHHHHcC---------CceEEEEECcCChHHHHhCC
Q psy6451 132 GEYEEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHMKTLCKKHL---------ETRFIKLNVERAPFLTERLR 200 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~--~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~---------~v~f~kVd~~~~~~l~~~~~ 200 (332)
+.+.+++. .+|.+.+.. +++|||+||||||++|+.+.|.|+++++.|. .+.|++||++..+.++++|+
T Consensus 23 ~~V~~Lt~-~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 23 SSVVDLSG-DDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp TTEEECSC-SCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCcEECCH-HHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 44555544 356666644 3789999999999999999999999999997 39999999999999999999
Q ss_pred cccCcEEEEEeCCe--eeeeEecccCcch
Q psy6451 201 IKVIPTLTLVKDSV--TKDYIVGFTELGN 227 (332)
Q Consensus 201 I~~~PTl~~~~~G~--~v~~~~G~~~~~~ 227 (332)
|.++||+++|++|. ...++.|....+.
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e~ 130 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLEH 130 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEEE
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHHH
Confidence 99999999997543 4566777666554
No 127
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.47 E-value=2e-13 Score=111.58 Aligned_cols=80 Identities=18% Similarity=0.280 Sum_probs=71.7
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC-------------------------ChHHHHhCCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER-------------------------APFLTERLRI 201 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~-------------------------~~~l~~~~~I 201 (332)
+++++||+||++||++|+.+.|.|.+++++|+ ++.|+.|+++. ...+++.|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 57899999999999999999999999999998 59999999854 5678999999
Q ss_pred ccCcEEEEE-eCCeeeeeEecccCcchh
Q psy6451 202 KVIPTLTLV-KDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 202 ~~~PTl~~~-~~G~~v~~~~G~~~~~~~ 228 (332)
.++||++++ ++|+++.++.|..+...+
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~~l 140 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAEQL 140 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHHHH
Confidence 999999999 799999999998765544
No 128
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.46 E-value=4e-13 Score=127.85 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=122.7
Q ss_pred cceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCC--------CCccc--ccCCC
Q psy6451 62 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVER--------APFLT--GQQGH 131 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k--------~pfl~--~k~g~ 131 (332)
..+.+|++.+++.++++....+||-||.+.+..+ ...|..+|..+.++.|+.+.-.+ .|.++ .+.+.
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~~~~~F~~t~~~~v~~~~~v~~~~i~lfk~f~~ 93 (361)
T 3uem_A 17 EFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDE 93 (361)
T ss_dssp SSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHCSSSCEEEECCHHHHHHTTCSSSEEEEEESSTT
T ss_pred ccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcCCCceEEEECcHHHHHHhCCCCCeEEEEEecCC
Confidence 3578899999999999999999999998765554 46899999998778886554211 12111 11111
Q ss_pred ------C-----------------cccccCChhHHHHHhcc-CCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEE
Q psy6451 132 ------G-----------------EYEEIPDEKKFFDLCKK-SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIK 186 (332)
Q Consensus 132 ------g-----------------~~~ei~~e~~~~~~~~~-~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~k 186 (332)
| .+.+++ .+.+.....+ .++++|.||++||++|+.+.|.|+++|++|.+ +.|+.
T Consensus 94 ~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~-~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~ 172 (361)
T 3uem_A 94 GRNNFEGEVTKENLLDFIKHNQLPLVIEFT-EQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIF 172 (361)
T ss_dssp SEEECCSCCCHHHHHHHHHHHSSCSEEECS-TTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEE
T ss_pred CccccCCcCCHHHHHHHHHHcCCCcceecC-cccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEE
Confidence 1 122233 3344444444 35678999999999999999999999999987 99999
Q ss_pred EECc--CChHHHHhCCccc--CcEEEEEeCCeeeeeEe---cccCcchhhHhHHHHH
Q psy6451 187 LNVE--RAPFLTERLRIKV--IPTLTLVKDSVTKDYIV---GFTELGNCADFSTEML 236 (332)
Q Consensus 187 Vd~~--~~~~l~~~~~I~~--~PTl~~~~~G~~v~~~~---G~~~~~~~~~f~~~~L 236 (332)
||++ ..+.+++.|+|.+ +||+++|..|.....+. |......+.+|+.+.+
T Consensus 173 vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l 229 (361)
T 3uem_A 173 IDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFL 229 (361)
T ss_dssp ECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHH
T ss_pred ecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHh
Confidence 9999 6899999999998 99999999876666665 4444444555544443
No 129
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.44 E-value=6e-13 Score=118.49 Aligned_cols=96 Identities=8% Similarity=0.085 Sum_probs=79.7
Q ss_pred hHHHHHh--ccCCcEEEEEe-----cCCChhhHHHHHHHHHHHHHc--CC-ceEEEEECcCChHHHHhCCcccCcEEEEE
Q psy6451 141 KKFFDLC--KKSPNMVVHFY-----KDGSVNCKILDEHMKTLCKKH--LE-TRFIKLNVERAPFLTERLRIKVIPTLTLV 210 (332)
Q Consensus 141 ~~~~~~~--~~~~~VvV~Fy-----a~wc~~Ck~l~~~l~~La~~~--~~-v~f~kVd~~~~~~l~~~~~I~~~PTl~~~ 210 (332)
+.+.+.+ +...+|+|.|| +|||++|+.+.|.|+++|..+ .+ ++|++||++..+.+|++|+|+++||+++|
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~ 88 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIE 88 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEE
Confidence 4455555 34567776666 899999999999999998876 44 99999999999999999999999999999
Q ss_pred eCCeeeeeEecccCcchhhHhHHHHH
Q psy6451 211 KDSVTKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 211 ~~G~~v~~~~G~~~~~~~~~f~~~~L 236 (332)
++|....++.|......+..|+...+
T Consensus 89 ~~~~~~~~~~G~~~~~~l~~~~~~~~ 114 (229)
T 2ywm_A 89 GDKDYGIRYIGLPAGLEFTTLINGIF 114 (229)
T ss_dssp SSSCCCEEEESCCCTTHHHHHHHHHH
T ss_pred CCCcccceecCCccHHHHHHHHHHHH
Confidence 98889999999887776666655443
No 130
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.43 E-value=2.6e-13 Score=108.04 Aligned_cols=73 Identities=19% Similarity=0.282 Sum_probs=63.9
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcch
Q psy6451 151 PNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGN 227 (332)
Q Consensus 151 ~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~ 227 (332)
..+|+.||+|||++|+.+.|.|++++..+. +.|.+||++..+.++.+|+++ +||+++|.+|+.+ ..|..+...
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~ 101 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDV 101 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHH
Confidence 367999999999999999999999999875 999999999999999999997 9999999999987 335444433
No 131
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.42 E-value=6.6e-13 Score=111.33 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=74.7
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCChHHHHhC---------------------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERAPFLTERL--------------------------- 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~~~l~~~~--------------------------- 199 (332)
+++++||.||++||++|+.+.|.|.+++.+|++ +.|+.|+++..+..+..|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 578999999999999999999999999999986 899999999887766666
Q ss_pred CcccCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHH
Q psy6451 200 RIKVIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 200 ~I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~L 236 (332)
++.++||++++ ++|+++.++.|..+...+..++.+.|
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 150 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMAL 150 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 89999999988 79999999999876555544443333
No 132
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.42 E-value=5.8e-13 Score=110.72 Aligned_cols=80 Identities=13% Similarity=0.186 Sum_probs=68.5
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC------------------------ChHHHHhCC--
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER------------------------APFLTERLR-- 200 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~------------------------~~~l~~~~~-- 200 (332)
++++|||.||++||++|+.+.|.|.+++.+|. ++.|+.|+++. ...++..|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 57899999999999999999999999999984 38999999863 345778899
Q ss_pred cccCcEEEEE-eCCeeeeeEecccCcchh
Q psy6451 201 IKVIPTLTLV-KDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 201 I~~~PTl~~~-~~G~~v~~~~G~~~~~~~ 228 (332)
+.++||++++ ++|+++.++.|..+...+
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~~l 131 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEKSL 131 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHHHH
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHHHH
Confidence 9999998888 699999999997665433
No 133
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.42 E-value=7.8e-13 Score=109.67 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=69.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCC----------------------hHHHHhCCcccC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERA----------------------PFLTERLRIKVI 204 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~----------------------~~l~~~~~I~~~ 204 (332)
+++++||.||++||++|+.+.|.|.+++.+++. +.|+.|+++.. ..++..|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 578999999999999999999999999999875 89999998763 478899999999
Q ss_pred cEEEEE-eCCeeeeeEecccCcc
Q psy6451 205 PTLTLV-KDSVTKDYIVGFTELG 226 (332)
Q Consensus 205 PTl~~~-~~G~~v~~~~G~~~~~ 226 (332)
||++++ ++|+++.++.|..+..
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~ 127 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTES 127 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHH
T ss_pred CeEEEECCCCcEEEEEeCCCCHH
Confidence 999999 7999999999876543
No 134
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.41 E-value=5e-13 Score=109.72 Aligned_cols=76 Identities=16% Similarity=0.269 Sum_probs=69.7
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCChH-------------------------HHHhCCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERAPF-------------------------LTERLRI 201 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~~~-------------------------l~~~~~I 201 (332)
+++++||.||++||++|+.+.|.|.+++.+|+. +.|+.|+++..+. ++..|+|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 578999999999999999999999999999876 9999999998776 8999999
Q ss_pred ccCcEEEEE-eCCeeeeeEecccC
Q psy6451 202 KVIPTLTLV-KDSVTKDYIVGFTE 224 (332)
Q Consensus 202 ~~~PTl~~~-~~G~~v~~~~G~~~ 224 (332)
.++||++++ ++|+++.++.|...
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~~ 133 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYEN 133 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGGG
T ss_pred CCCCEEEEECCCCcEEEecCCHHH
Confidence 999999999 79999999888643
No 135
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.40 E-value=8.5e-13 Score=111.54 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=74.3
Q ss_pred ccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEEC-----------------------cCChHHHHhCCcccC
Q psy6451 148 KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV-----------------------ERAPFLTERLRIKVI 204 (332)
Q Consensus 148 ~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~-----------------------~~~~~l~~~~~I~~~ 204 (332)
.+++++||+||++||++|+.+.|.|.+++++ ++.|+.|++ +....++..|+|.++
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 126 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGA 126 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCcccc
Confidence 4689999999999999999999999999987 788888873 455678899999999
Q ss_pred cEEE-EEeCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 205 PTLT-LVKDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 205 PTl~-~~~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
||++ +.++|+++.++.|..+...+..++.+.|+...
T Consensus 127 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 163 (168)
T 2b1k_A 127 PETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYS 163 (168)
T ss_dssp SEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHHHHH
T ss_pred CEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 9555 55799999999998777666666666555443
No 136
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.40 E-value=1.2e-12 Score=109.33 Aligned_cols=88 Identities=13% Similarity=0.100 Sum_probs=72.0
Q ss_pred cCCcEEEEEecCCChhhHH-HHHHHHHHHHHcCC--ceEEEEECc----------------------------CChH---
Q psy6451 149 KSPNMVVHFYKDGSVNCKI-LDEHMKTLCKKHLE--TRFIKLNVE----------------------------RAPF--- 194 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~-l~~~l~~La~~~~~--v~f~kVd~~----------------------------~~~~--- 194 (332)
++++|||+||++||++|+. +.|.|.+++.+|++ +.|+.|+++ ....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 5789999999999999999 79999999999975 899999852 2333
Q ss_pred ---HHHhCCcccCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 195 ---LTERLRIKVIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 195 ---l~~~~~I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
++..|+|.++||++++ ++|+++.++.|..+... +.+.|+.+|
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~----l~~~i~~ll 154 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFV----LGLLLGSLL 154 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHH----HHHHHHHHH
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHH----HHHHHHHHH
Confidence 8899999999999999 59999999999765433 344445444
No 137
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.40 E-value=6.6e-12 Score=125.83 Aligned_cols=143 Identities=11% Similarity=0.125 Sum_probs=105.7
Q ss_pred CcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeeccc--CCCCccccc--------------CCC------------C
Q psy6451 81 PNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV--ERAPFLTGQ--------------QGH------------G 132 (332)
Q Consensus 81 ~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~--~k~pfl~~k--------------~g~------------g 132 (332)
.+|.+.+|...|..|..|...|.++|..-+.+.+...+. ...|.+.-. .|| +
T Consensus 19 ~~v~l~~~~~~~~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~p~~~~~~~~~~~~i~f~g~p~g~e~~s~~~~l~~~~ 98 (521)
T 1hyu_A 19 KPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNTLPVRKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTG 98 (521)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHTTCTTEEEEECTTSSSCSSEEEEECTTCCCSCEEESCCCGGGHHHHHHHHHHHT
T ss_pred CCEEEEEEeCCCcchHHHHHHHHHHHHhCCceEEEEcCCcccCCCEEEEecCCCcceEEEeccCcchhHHHHHHHHHhhc
Confidence 467788888899999999999999998877666533321 223432221 122 0
Q ss_pred cccccCChhHHHHHhc--cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEE
Q psy6451 133 EYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLV 210 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~~--~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~ 210 (332)
..+. .-..++.+.+. ..+..|+.||++||++|+.+.|.+++++..++.+.|.++|++..+.++++|+|.++||+++
T Consensus 99 ~~~~-~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~~~i~svPt~~i- 176 (521)
T 1hyu_A 99 GHPS-KEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFV- 176 (521)
T ss_dssp TCCC-CSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCSSSEEEE-
T ss_pred CCCC-CCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhhHHHHHHhCCCccCEEEE-
Confidence 1111 11334445443 3567799999999999999999999999999999999999999999999999999999977
Q ss_pred eCCeeeeeEecccCcchh
Q psy6451 211 KDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 211 ~~G~~v~~~~G~~~~~~~ 228 (332)
||+.+.. |..+...+
T Consensus 177 -~g~~~~~--G~~~~~~l 191 (521)
T 1hyu_A 177 -NGKEFGQ--GRMTLTEI 191 (521)
T ss_dssp -TTEEEEE--SCCCHHHH
T ss_pred -CCEEEec--CCCCHHHH
Confidence 9998865 66554443
No 138
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.40 E-value=1.1e-12 Score=109.00 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=73.9
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc-----------------------CChHHHHhCCcccCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE-----------------------RAPFLTERLRIKVIP 205 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~-----------------------~~~~l~~~~~I~~~P 205 (332)
.++++||.||++||++|+.+.|.|.+++.+ ..+.|+.|+++ ....++..|++.++|
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 119 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVP 119 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccC
Confidence 478999999999999999999999999887 55899988864 345688899999999
Q ss_pred EEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHH
Q psy6451 206 TLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWR 239 (332)
Q Consensus 206 Tl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~ 239 (332)
|++++ ++|+++.++.|..+...+..++.+.|+..
T Consensus 120 ~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 154 (156)
T 1kng_A 120 ETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKA 154 (156)
T ss_dssp EEEEECTTSBEEEEEESCCCHHHHHHTHHHHHHHH
T ss_pred eEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 76666 79999999999877766666666555543
No 139
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.39 E-value=3.9e-13 Score=108.88 Aligned_cols=61 Identities=25% Similarity=0.548 Sum_probs=55.2
Q ss_pred CcceEecCCchhhhhhhcCCC---cEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCC
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSP---NMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA 122 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~---~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~ 122 (332)
||.|.+|+ ..+|.+.+.++. +||||||+|||++|+.|+|+|++||..|++++|+++|+++.
T Consensus 2 ~G~v~~it-~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~ 65 (118)
T 3evi_A 2 FGELREIS-GNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSC 65 (118)
T ss_dssp CCSCEECC-GGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGT
T ss_pred CcceEEeC-HHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHh
Confidence 89999995 678888775543 79999999999999999999999999999999999999975
No 140
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.39 E-value=2.6e-13 Score=113.89 Aligned_cols=79 Identities=15% Similarity=0.259 Sum_probs=65.8
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcC--CceEEEEE----------------------------CcCChHHHHh
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLN----------------------------VERAPFLTER 198 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd----------------------------~~~~~~l~~~ 198 (332)
+++++||+||++||++|+.+.|.|.+++.+|. ++.|+.|+ ++....+++.
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 57899999999999999999999999998863 36665554 3345678999
Q ss_pred CCcccCcEEEEE-eCCeeeeeEecccCcch
Q psy6451 199 LRIKVIPTLTLV-KDSVTKDYIVGFTELGN 227 (332)
Q Consensus 199 ~~I~~~PTl~~~-~~G~~v~~~~G~~~~~~ 227 (332)
|+|.++||++++ ++|+++.++.|..+...
T Consensus 117 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~ 146 (164)
T 2h30_A 117 LNISVYPSWALIGKDGDVQRIVKGSINEAQ 146 (164)
T ss_dssp TTCCSSSEEEEECTTSCEEEEEESCCCHHH
T ss_pred cCCCccceEEEECCCCcEEEEEcCCCCHHH
Confidence 999999999999 79999999999665433
No 141
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.39 E-value=1.5e-12 Score=108.70 Aligned_cols=88 Identities=10% Similarity=0.059 Sum_probs=71.5
Q ss_pred cCCcEEEEEecCCChhhHHH-HHHHHHHHHHcCC--ceEEEEECc----------------------------CCh----
Q psy6451 149 KSPNMVVHFYKDGSVNCKIL-DEHMKTLCKKHLE--TRFIKLNVE----------------------------RAP---- 193 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l-~~~l~~La~~~~~--v~f~kVd~~----------------------------~~~---- 193 (332)
++++|||+||++||++|+.. .|.|.+++++|++ +.|+.|+++ ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 47899999999999999995 9999999999973 899998863 122
Q ss_pred -HHHHhCCcccCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 194 -FLTERLRIKVIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 194 -~l~~~~~I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
.++..|+|.++||++++ ++|+++.++.|..+... +.+.|+.+|
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~----l~~~i~~ll 151 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELL----LGAEIATLL 151 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHH----HHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHH----HHHHHHHHh
Confidence 58899999999999988 69999999999765433 344455444
No 142
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.39 E-value=2.2e-13 Score=104.49 Aligned_cols=58 Identities=14% Similarity=0.216 Sum_probs=53.4
Q ss_pred EEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeee
Q psy6451 154 VVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKD 217 (332)
Q Consensus 154 vV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~ 217 (332)
|+.||+|||++|+.+.|.|++++..+ |.+||++.++.++++|+++ +||+++ .+|+.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~ 60 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD 60 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe
Confidence 78999999999999999999887654 7899999999999999998 999999 9999874
No 143
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.38 E-value=1.9e-12 Score=104.10 Aligned_cols=79 Identities=15% Similarity=0.201 Sum_probs=68.4
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEEC----------------------------cCChHHHHhC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNV----------------------------ERAPFLTERL 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~----------------------------~~~~~l~~~~ 199 (332)
+++++||.||++||++|+.+.|.|.+++.+++. +.++.|+. +....+++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 578999999999999999999999999999875 88888853 3345689999
Q ss_pred CcccCcEEEEE-eCCeeeeeEecccCcch
Q psy6451 200 RIKVIPTLTLV-KDSVTKDYIVGFTELGN 227 (332)
Q Consensus 200 ~I~~~PTl~~~-~~G~~v~~~~G~~~~~~ 227 (332)
++.++||++++ ++|+++.++.|..+...
T Consensus 101 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~ 129 (138)
T 4evm_A 101 GVRSYPTQAFIDKEGKLVKTHPGFMEKDA 129 (138)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESCCCHHH
T ss_pred CcccCCeEEEECCCCcEEEeecCCCcHHH
Confidence 99999999999 79999999999766443
No 144
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.37 E-value=2.2e-12 Score=105.88 Aligned_cols=72 Identities=11% Similarity=0.138 Sum_probs=65.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHc-CC--ceEEEEECcCCh-------------------------HHHHhCC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LE--TRFIKLNVERAP-------------------------FLTERLR 200 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~-~~--v~f~kVd~~~~~-------------------------~l~~~~~ 200 (332)
+++++||.||++||++|+.+.|.|.+++.+| .+ +.|+.|+++..+ .++..|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 5789999999999999999999999999999 54 899999988743 7899999
Q ss_pred cccCcEEEEE-eCCeeeeeEe
Q psy6451 201 IKVIPTLTLV-KDSVTKDYIV 220 (332)
Q Consensus 201 I~~~PTl~~~-~~G~~v~~~~ 220 (332)
|.++||++++ ++|+++.+..
T Consensus 112 v~~~P~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARDI 132 (148)
T ss_dssp CCSSSEEEEECTTSBEEEESC
T ss_pred CCCcCEEEEECCCCeEEEecC
Confidence 9999999999 7999998876
No 145
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.37 E-value=2.1e-12 Score=107.23 Aligned_cols=74 Identities=14% Similarity=0.203 Sum_probs=67.4
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEEC---------------------------cCChHHHHhCCccc
Q psy6451 151 PNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV---------------------------ERAPFLTERLRIKV 203 (332)
Q Consensus 151 ~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~---------------------------~~~~~l~~~~~I~~ 203 (332)
+++||.||++||++|+.+.|.|.++++++ ++.|+.|++ +....++..|++.+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 109 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG 109 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc
Confidence 89999999999999999999999999999 999999999 35677899999999
Q ss_pred CcEEEEE-eCCeeeeeEecccCc
Q psy6451 204 IPTLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 204 ~PTl~~~-~~G~~v~~~~G~~~~ 225 (332)
+||++++ ++|+++.++.|..+.
T Consensus 110 ~P~~~lid~~G~i~~~~~g~~~~ 132 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFAGRAGR 132 (154)
T ss_dssp SCEEEEECTTSEEEEEEESBCCH
T ss_pred ccEEEEECCCCCEEEEEcCCCCH
Confidence 9998888 799999999986553
No 146
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.37 E-value=1.6e-12 Score=107.54 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=70.0
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCCh-----------------------HHHHhCCccc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERAP-----------------------FLTERLRIKV 203 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~~-----------------------~l~~~~~I~~ 203 (332)
.++++||.||++||++|+.+.|.|.+++.++++ +.|+.|+++..+ .+++.|+|.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 468999999999999999999999999999975 899999988765 6889999999
Q ss_pred CcEEEEEe-CCeeeeeEecccCcch
Q psy6451 204 IPTLTLVK-DSVTKDYIVGFTELGN 227 (332)
Q Consensus 204 ~PTl~~~~-~G~~v~~~~G~~~~~~ 227 (332)
+||++++. +|+++.++.|..+...
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~ 133 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPK 133 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHH
T ss_pred CCEEEEECCCCeEEEccCCCCCHHH
Confidence 99999996 9999999888655433
No 147
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.37 E-value=3.2e-12 Score=105.73 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=69.3
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCCh----------------------HHHHhCCcccC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERAP----------------------FLTERLRIKVI 204 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~~----------------------~l~~~~~I~~~ 204 (332)
+++++||.||++||++|+.+.|.|.+++.+|+. +.|+.|+++..+ .+++.|++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 578999999999999999999999999999976 899999988765 67888999999
Q ss_pred cEEEEE-eCCeeeeeEecccCc
Q psy6451 205 PTLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 205 PTl~~~-~~G~~v~~~~G~~~~ 225 (332)
||++++ ++|+++.++.|..+.
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~ 128 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPA 128 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTT
T ss_pred CeEEEECCCCCEEEEEccCCCc
Confidence 998888 799999999997543
No 148
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.37 E-value=7.1e-12 Score=113.01 Aligned_cols=168 Identities=11% Similarity=0.115 Sum_probs=105.3
Q ss_pred CcceEecCCchhhhhhhcC-CCcEEEEEccCCChhhhhhHHHHHHHHHhhhh----ceeeeccc--CCCCcccccCCCCc
Q psy6451 61 HGEYEEIPDEKKFFDLCKK-SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE----TRFIKLNV--ERAPFLTGQQGHGE 133 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~-~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~----~~f~kvd~--~k~pfl~~k~g~g~ 133 (332)
.+.+.+|+ ..+|.+.+.+ +.++||+||++||++|+.+.|.|.++|..+.+ +.|+++++ +..+-++...+...
T Consensus 11 ~~~v~~l~-~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~ 89 (244)
T 3q6o_A 11 SDPLTLLQ-ADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG 89 (244)
T ss_dssp TSSSEEEC-TTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS
T ss_pred CCCceeCC-hhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc
Confidence 45688885 5788887754 48899999999999999999999999999985 88999998 33222221111100
Q ss_pred cc-------------------------------------------------ccCChhHHHHHh--ccCCcEEEEEecCCC
Q psy6451 134 YE-------------------------------------------------EIPDEKKFFDLC--KKSPNMVVHFYKDGS 162 (332)
Q Consensus 134 ~~-------------------------------------------------ei~~e~~~~~~~--~~~~~VvV~Fya~wc 162 (332)
++ +..+..++...+ ....++++.|....|
T Consensus 90 ~Pt~~~~~~g~~~~~g~~~~~~g~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~ 169 (244)
T 3q6o_A 90 FPTVRFFXAFTXNGSGAVFPVAGADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGGS 169 (244)
T ss_dssp SSEEEEECTTCCSSSCEECCCTTCCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTTC
T ss_pred cCEEEEEeCCCcCCCCeeEecCCCCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECCc
Confidence 00 112234444443 344667777887765
Q ss_pred hhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEe-CCeeeeeEecccCcchhhHhHHHHHHH
Q psy6451 163 VNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVK-DSVTKDYIVGFTELGNCADFSTEMLEW 238 (332)
Q Consensus 163 ~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~-~G~~v~~~~G~~~~~~~~~f~~~~Le~ 238 (332)
..++.+.-. +. .++.+.+..++ +....++++|+|.++||+++|. +|+....-+.. ....|....|+.
T Consensus 170 ~~~~~~~~d---~~-~~~~i~v~~~~-~~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~~~~----~~r~~~~~~l~~ 237 (244)
T 3q6o_A 170 YLAREVALD---LS-QHKGVAVRRVL-NTEANVVRKFGVTDFPSCYLLFRNGSVSRVPVLM----ESRSFYTAYLQR 237 (244)
T ss_dssp CHHHHHHHH---TT-TCTTEEEEEEE-TTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSS----SSHHHHHHHHHT
T ss_pred chHHHHHHH---hc-cCCceEEEEEe-CchHHHHHHcCCCCCCeEEEEeCCCCeEeecccc----ccHHHHHHHHHh
Confidence 543332211 11 12346665554 4568899999999999998886 66554433221 224555555554
No 149
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.36 E-value=3.9e-12 Score=105.79 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=66.1
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC-------------------------ChHHHHhCCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER-------------------------APFLTERLRI 201 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~-------------------------~~~l~~~~~I 201 (332)
+++++||.||++||++|+.+.|.|.+++.+|++ +.|+.|+++. ...+++.|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 578999999999999999999999999999976 8999999987 4678899999
Q ss_pred ccCcEEEEE-eCCeeeeeEec
Q psy6451 202 KVIPTLTLV-KDSVTKDYIVG 221 (332)
Q Consensus 202 ~~~PTl~~~-~~G~~v~~~~G 221 (332)
.++||++++ ++|+++.++.+
T Consensus 108 ~~~P~~~lid~~G~i~~~~~~ 128 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKELR 128 (152)
T ss_dssp CSSCEEEEECTTSEEEEECCC
T ss_pred CcCCeEEEECCCCeEEEeeCC
Confidence 999999999 79999988743
No 150
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.35 E-value=2.8e-12 Score=106.27 Aligned_cols=89 Identities=11% Similarity=0.166 Sum_probs=73.3
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEEC-----------------------cCChHHHHhCCccc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNV-----------------------ERAPFLTERLRIKV 203 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~-----------------------~~~~~l~~~~~I~~ 203 (332)
+++++||.||++||++|+.+.|.|.+++.+++. +.|+.|+. +....+++.|+|.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 578999999999999999999999999999875 78877663 34567899999999
Q ss_pred CcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHHH
Q psy6451 204 IPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRIA 241 (332)
Q Consensus 204 ~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~ 241 (332)
+||++++ ++|+++..+.|..+...+ .+.|+..|.
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l----~~~l~~ll~ 141 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKL----YQEIDTAWR 141 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHH----HHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHH----HHHHHHHHH
Confidence 9999999 799999999997655443 444555554
No 151
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.34 E-value=5.4e-13 Score=106.19 Aligned_cols=95 Identities=14% Similarity=0.075 Sum_probs=68.4
Q ss_pred HHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC-----hHHHHhCCcccCcEEEEEeCCeee
Q psy6451 142 KFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA-----PFLTERLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 142 ~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~-----~~l~~~~~I~~~PTl~~~~~G~~v 216 (332)
++...+.++.+|++ ||++||++|+.+.|.|+.++.. ..++.|+.+.. +.+++.|++.++||+ |.+|+.+
T Consensus 11 ~~~~~~~~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~---~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v 84 (116)
T 2e7p_A 11 KKAKELASSAPVVV-FSKTYCGYCNRVKQLLTQVGAS---YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQI 84 (116)
T ss_dssp HHHHHHHTSSSEEE-EECTTCHHHHHHHHHHHHHTCC---CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEE
T ss_pred HHHHHHHcCCCEEE-EECCCChhHHHHHHHHHHcCCC---eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 44444444566776 9999999999999999988654 36666666665 568999999999999 6699888
Q ss_pred eeEecccCcchhhHhHHHHHHHHHHHcCCcc
Q psy6451 217 DYIVGFTELGNCADFSTEMLEWRIAQAGVID 247 (332)
Q Consensus 217 ~~~~G~~~~~~~~~f~~~~Le~~L~~~g~l~ 247 (332)
..+.|... -...+.|+.+|.+.|++.
T Consensus 85 ~~~~~~~~-----~~~~~~l~~~l~~~g~~~ 110 (116)
T 2e7p_A 85 GGCDTVVE-----KHQRNELLPLLQDAAATA 110 (116)
T ss_dssp ECHHHHHH-----HHHTTCHHHHHHHTTC--
T ss_pred CChHHHHH-----HHhCChHHHHHHHccccc
Confidence 76655321 113346788888888764
No 152
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.34 E-value=7.4e-12 Score=104.87 Aligned_cols=79 Identities=18% Similarity=0.304 Sum_probs=71.6
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC-------------------ChHHHHhCCcccCcEE
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER-------------------APFLTERLRIKVIPTL 207 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~-------------------~~~l~~~~~I~~~PTl 207 (332)
+++++||.||++||++|+.+.|.|.+++.+++ ++.|+.|+++. ...++..|+|.++||+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDT 119 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceE
Confidence 57899999999999999999999999999998 49999999887 6789999999999997
Q ss_pred EEE-eCCeeeeeEecccCcch
Q psy6451 208 TLV-KDSVTKDYIVGFTELGN 227 (332)
Q Consensus 208 ~~~-~~G~~v~~~~G~~~~~~ 227 (332)
+++ ++|+++.++.|..+...
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~ 140 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDA 140 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTS
T ss_pred EEEcCCCCEEEEEeCCCccch
Confidence 777 79999999999877654
No 153
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.1e-11 Score=115.68 Aligned_cols=174 Identities=16% Similarity=0.161 Sum_probs=114.4
Q ss_pred CcceEecCCchhhhhhhc-CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccC--CC------------Cc
Q psy6451 61 HGEYEEIPDEKKFFDLCK-KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE--RA------------PF 124 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~-~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~--k~------------pf 124 (332)
.+.|.+|+ .++|.+++. .+.++||.||+|||++|+.+.|.|.++|..+.+ +.|+.++++ .. |.
T Consensus 16 ~~~vv~lt-~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt 94 (298)
T 3ed3_A 16 DPHISELT-PKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPT 94 (298)
T ss_dssp CTTCEECC-HHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSE
T ss_pred CCCeEEeC-HHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccce
Confidence 36899995 789999994 567899999999999999999999999999976 677777665 21 21
Q ss_pred ccc-cCCC-----------------------C-----------------cccccCChhHHHHHhccC-CcEEEEEecCCC
Q psy6451 125 LTG-QQGH-----------------------G-----------------EYEEIPDEKKFFDLCKKS-PNMVVHFYKDGS 162 (332)
Q Consensus 125 l~~-k~g~-----------------------g-----------------~~~ei~~e~~~~~~~~~~-~~VvV~Fya~wc 162 (332)
+.- ..|. | .+..+.+.+++...+... .++|+.| ....
T Consensus 95 ~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~f-s~~~ 173 (298)
T 3ed3_A 95 LMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLF-SKQD 173 (298)
T ss_dssp EEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEE-ESSS
T ss_pred EEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEE-cCCC
Confidence 111 1111 1 134456777788888765 5555555 4332
Q ss_pred hhhHHHHHHHHHHHHHcCC-ceEEEEECcCChHHH--HhCC-----c-------------ccCcEEEEEeC-CeeeeeEe
Q psy6451 163 VNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLT--ERLR-----I-------------KVIPTLTLVKD-SVTKDYIV 220 (332)
Q Consensus 163 ~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~~~~l~--~~~~-----I-------------~~~PTl~~~~~-G~~v~~~~ 220 (332)
...+.|..+|..+.+ +.|+.++......+. .+|+ | ...|+|++|+. ++....+.
T Consensus 174 ----~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~ 249 (298)
T 3ed3_A 174 ----KISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYE 249 (298)
T ss_dssp ----SCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECC
T ss_pred ----cchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEec
Confidence 244788999999865 999999865442222 2333 3 67999999985 33334444
Q ss_pred cccCcchhhHhHHHHHHHHHH-HcCCcc
Q psy6451 221 GFTELGNCADFSTEMLEWRIA-QAGVID 247 (332)
Q Consensus 221 G~~~~~~~~~f~~~~Le~~L~-~~g~l~ 247 (332)
| ..+..+.|..+|. +...++
T Consensus 250 g-------~~~~~~~i~~fi~~~~~~~p 270 (298)
T 3ed3_A 250 G-------NSINKNDISKFLRDTFSITP 270 (298)
T ss_dssp C-------SSCCHHHHHHHHHHHHTCCC
T ss_pred c-------ccCCHHHHHHHHHhhcCCCC
Confidence 3 1344455555554 344443
No 154
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.33 E-value=4.6e-12 Score=106.68 Aligned_cols=73 Identities=19% Similarity=0.306 Sum_probs=65.5
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc------------------CCh-----------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE------------------RAP----------------- 193 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~------------------~~~----------------- 193 (332)
+++++||.||++||++|+.+.|.|.+++++|+++.|+.|+++ ..+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIM 115 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeE
Confidence 568999999999999999999999999999999999999987 443
Q ss_pred -----HHHHhCCcccCcEEEEE-eCCeeeeeEeccc
Q psy6451 194 -----FLTERLRIKVIPTLTLV-KDSVTKDYIVGFT 223 (332)
Q Consensus 194 -----~l~~~~~I~~~PTl~~~-~~G~~v~~~~G~~ 223 (332)
.++..|+|.++||++++ ++|+++. .|..
T Consensus 116 ~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~ 149 (165)
T 3ha9_A 116 VMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTT 149 (165)
T ss_dssp EECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEES
T ss_pred EeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCC
Confidence 78899999999999999 6899888 6654
No 155
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.32 E-value=2e-11 Score=101.20 Aligned_cols=72 Identities=14% Similarity=0.212 Sum_probs=65.3
Q ss_pred cCCcEEEEEecCCChh--hHHHHHHHHHHHHHc-C--CceEEEEECcCCh-------------------------HHHHh
Q psy6451 149 KSPNMVVHFYKDGSVN--CKILDEHMKTLCKKH-L--ETRFIKLNVERAP-------------------------FLTER 198 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~--Ck~l~~~l~~La~~~-~--~v~f~kVd~~~~~-------------------------~l~~~ 198 (332)
++++|||+||++||++ |+.+.|.|.++..+| . ++.|+.|+++..+ .+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 5789999999999999 999999999999999 3 4899999988765 68899
Q ss_pred CCcccCcEEEEE-eCCeeeeeEe
Q psy6451 199 LRIKVIPTLTLV-KDSVTKDYIV 220 (332)
Q Consensus 199 ~~I~~~PTl~~~-~~G~~v~~~~ 220 (332)
|+|.++||++++ ++|+++.+..
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKNL 134 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEESC
T ss_pred cCCCccCeEEEECCCCEEEEccC
Confidence 999999999999 7999998875
No 156
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.32 E-value=7.8e-12 Score=104.51 Aligned_cols=78 Identities=10% Similarity=0.169 Sum_probs=69.6
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCChH-----------------------HHHhCCccc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERAPF-----------------------LTERLRIKV 203 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~~~-----------------------l~~~~~I~~ 203 (332)
++++|||.||++||++|+...|.|.+++++|.+ +.|+.|+++.... ++..|++.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 468999999999999999999999999999875 8999999887654 888999999
Q ss_pred CcEEEEE-eCCeeeeeEecccCcc
Q psy6451 204 IPTLTLV-KDSVTKDYIVGFTELG 226 (332)
Q Consensus 204 ~PTl~~~-~~G~~v~~~~G~~~~~ 226 (332)
+||++++ ++|+++.++.|..++.
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e 137 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLD 137 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHH
T ss_pred CceEEEECCCCeEEEecCCHHHHH
Confidence 9999999 6999999999876653
No 157
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.31 E-value=7.3e-12 Score=102.93 Aligned_cols=73 Identities=14% Similarity=0.157 Sum_probs=63.9
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHH---HHHHcC--CceEEEEECcCChH------------------------HHHhC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKT---LCKKHL--ETRFIKLNVERAPF------------------------LTERL 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~---La~~~~--~v~f~kVd~~~~~~------------------------l~~~~ 199 (332)
.+++|||+||++||++|+.+.|.|.+ +..+|. ++.|+.|+.+.... ++..|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 46899999999999999999999999 998884 49999999887643 47789
Q ss_pred CcccCcEEEEE-eCCeeeeeEec
Q psy6451 200 RIKVIPTLTLV-KDSVTKDYIVG 221 (332)
Q Consensus 200 ~I~~~PTl~~~-~~G~~v~~~~G 221 (332)
+|.++||++++ ++|+++.+..|
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~~~ 132 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKTVLLKDAT 132 (142)
T ss_dssp CCTTCSEEEEECTTCBEEEEEEC
T ss_pred CCCcCCeEEEECCCCcEEecCCC
Confidence 99999999999 68999988775
No 158
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.29 E-value=9.3e-12 Score=106.79 Aligned_cols=90 Identities=14% Similarity=0.226 Sum_probs=73.8
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEEC-----------------------cCChHHHHhCCcccCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV-----------------------ERAPFLTERLRIKVIP 205 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~-----------------------~~~~~l~~~~~I~~~P 205 (332)
.+++|||.||++||++|+.+.|.|.+++++ ++.|+.|++ +....++..|++.++|
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 134 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAP 134 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCC
Confidence 478999999999999999999999999987 788888885 3345678899999999
Q ss_pred EEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 206 TLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 206 Tl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
+++++ ++|+++.++.|..+...+.+++.+.|+...
T Consensus 135 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~l~ 170 (176)
T 3kh7_A 135 ETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQLL 170 (176)
T ss_dssp EEEEECTTCBEEEEEESCCCHHHHHHHTHHHHHHHH
T ss_pred eEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 87777 699999999998776666566665555443
No 159
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.29 E-value=6.9e-12 Score=103.55 Aligned_cols=73 Identities=11% Similarity=0.074 Sum_probs=64.0
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcC---CceEEEEECcCC------------------------hHHHHhCCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL---ETRFIKLNVERA------------------------PFLTERLRI 201 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~---~v~f~kVd~~~~------------------------~~l~~~~~I 201 (332)
++++|||+||++||++|+.+.|.|.+++++|. ++.|+.|+++.. ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 57899999999999999999999999999987 488999988763 468899999
Q ss_pred ccCcEEEEEe--CCeeeeeEec
Q psy6451 202 KVIPTLTLVK--DSVTKDYIVG 221 (332)
Q Consensus 202 ~~~PTl~~~~--~G~~v~~~~G 221 (332)
.++||++++. +|+++.+..+
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp CSSSEEEEEETTTCCEEESCHH
T ss_pred CCCCEEEEEECCCCeEEEecch
Confidence 9999999997 8998877543
No 160
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.29 E-value=7.5e-12 Score=102.98 Aligned_cols=72 Identities=17% Similarity=0.219 Sum_probs=63.5
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcC---CceEEEEECcCC------------------------hHHHHhCCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL---ETRFIKLNVERA------------------------PFLTERLRI 201 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~---~v~f~kVd~~~~------------------------~~l~~~~~I 201 (332)
++++|||+||++||++|+.+.|.|.+++++|. ++.++.|+++.. ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 56899999999999999999999999999997 488999988763 468899999
Q ss_pred ccCcEEEEEe--CCeeeeeEe
Q psy6451 202 KVIPTLTLVK--DSVTKDYIV 220 (332)
Q Consensus 202 ~~~PTl~~~~--~G~~v~~~~ 220 (332)
.++||++++. +|+++.+..
T Consensus 107 ~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 107 KSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp CSSSEEEEEETTTCCEEESCH
T ss_pred CCCCEEEEEECCCCcEEeccc
Confidence 9999999995 899887653
No 161
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.28 E-value=1.8e-12 Score=102.53 Aligned_cols=74 Identities=15% Similarity=0.312 Sum_probs=66.3
Q ss_pred eEecCCchhhhhhhcC--CCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccccc
Q psy6451 64 YEEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~~--~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
|.+|++.++|.+.+.. +++|||+||||||++|+.|.|.|.++|..++++.|+++|+++.+-++.+.+...++++
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~~PT~ 77 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIACMPTF 77 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCBSSEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCCCeecEE
Confidence 5688888999999854 5679999999999999999999999999999999999999999888888887777665
No 162
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.28 E-value=9.6e-12 Score=106.71 Aligned_cols=84 Identities=11% Similarity=0.222 Sum_probs=68.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--c------eEEEEECcC-ChHHHHhC--------------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--T------RFIKLNVER-APFLTERL-------------------- 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v------~f~kVd~~~-~~~l~~~~-------------------- 199 (332)
+++++||+||++||++|+.+.|.|.+++++|.. + .|+.|+++. .+..++.|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 578999999999999999999999999999865 7 999999998 66655554
Q ss_pred -----CcccCcEEEEE-eCCeeeeeEecccCcchhhHhH
Q psy6451 200 -----RIKVIPTLTLV-KDSVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 200 -----~I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~ 232 (332)
++.++|+++++ ++|+++.++.|......+..++
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 176 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVA 176 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHH
Confidence 78999976666 7999999999876554443333
No 163
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.27 E-value=1.2e-11 Score=104.96 Aligned_cols=72 Identities=18% Similarity=0.239 Sum_probs=64.0
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC---ceEEEEECcCC------------------------hHHHHhCCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE---TRFIKLNVERA------------------------PFLTERLRI 201 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~---v~f~kVd~~~~------------------------~~l~~~~~I 201 (332)
++++|||+||++||++|+.+.|.|.+++++|++ +.|+.|+++.. ..+++.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 478999999999999999999999999999873 88999988876 578999999
Q ss_pred ccCcEEEEEe-C-CeeeeeEe
Q psy6451 202 KVIPTLTLVK-D-SVTKDYIV 220 (332)
Q Consensus 202 ~~~PTl~~~~-~-G~~v~~~~ 220 (332)
.++||++++. + |+++.+..
T Consensus 127 ~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp CSSSEEEEEETTTCCEEESCH
T ss_pred CCCCEEEEEeCCCCEEEeccc
Confidence 9999999997 4 99887754
No 164
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.27 E-value=8.6e-12 Score=102.35 Aligned_cols=72 Identities=13% Similarity=0.201 Sum_probs=63.4
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcC---CceEEEEECcCC------------------------hHHHHhCCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL---ETRFIKLNVERA------------------------PFLTERLRI 201 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~---~v~f~kVd~~~~------------------------~~l~~~~~I 201 (332)
+++++||.||++||++|+.+.|.|.+++++|. ++.++.|+++.. ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 57899999999999999999999999999987 488888888763 358889999
Q ss_pred ccCcEEEEEe--CCeeeeeEe
Q psy6451 202 KVIPTLTLVK--DSVTKDYIV 220 (332)
Q Consensus 202 ~~~PTl~~~~--~G~~v~~~~ 220 (332)
.++||++++. +|+++.+..
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 107 ESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp CSSSEEEEEETTTCCEEESCH
T ss_pred CCCCEEEEEECCCCeEEecch
Confidence 9999999998 898887653
No 165
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.27 E-value=1.9e-11 Score=101.27 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=67.9
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCC-----------------------hHHHHhCCccc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERA-----------------------PFLTERLRIKV 203 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~-----------------------~~l~~~~~I~~ 203 (332)
+++++||.||++||++|+.+.|.|.+++.++++ +.|+.|+++.. ..++..|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 578999999999999999999999999999976 89999998875 33788999999
Q ss_pred CcEEEEE-eCCeeeeeEecccCc
Q psy6451 204 IPTLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 204 ~PTl~~~-~~G~~v~~~~G~~~~ 225 (332)
+|+++++ ++|+++.++.|....
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~ 129 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEW 129 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCT
T ss_pred CCeEEEECCCCcEEEEEcCCCcc
Confidence 9976666 799999999998644
No 166
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.26 E-value=9.4e-12 Score=101.87 Aligned_cols=70 Identities=14% Similarity=0.232 Sum_probs=60.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHH---HHHHcC--CceEEEEECcCChHH------------------------HHhC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKT---LCKKHL--ETRFIKLNVERAPFL------------------------TERL 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~---La~~~~--~v~f~kVd~~~~~~l------------------------~~~~ 199 (332)
+++++||+||++||++|+.+.|.|.+ +..+|. ++.|+.|+++..+.. +..|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 57899999999999999999999988 888874 489999998876543 3489
Q ss_pred CcccCcEEEEE-eCCeeeee
Q psy6451 200 RIKVIPTLTLV-KDSVTKDY 218 (332)
Q Consensus 200 ~I~~~PTl~~~-~~G~~v~~ 218 (332)
+|.++||++++ ++|+++.+
T Consensus 106 ~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp CCCSSSEEEEECTTCBEEEC
T ss_pred CCCCCCeEEEECCCCCEEec
Confidence 99999999999 68998763
No 167
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.26 E-value=5.4e-11 Score=102.13 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=65.6
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcC--CceEEEEECcCC-----hHHHHhCCcc-------------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERA-----PFLTERLRIK------------------- 202 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~~-----~~l~~~~~I~------------------- 202 (332)
+++++||+||++||++|+.+.|.|.++..+|. ++.|+.|+++.. ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 57899999999999999999999999999987 489999998764 3456677764
Q ss_pred ----cCcEEEEE-eCCeeeeeEecccC
Q psy6451 203 ----VIPTLTLV-KDSVTKDYIVGFTE 224 (332)
Q Consensus 203 ----~~PTl~~~-~~G~~v~~~~G~~~ 224 (332)
++||++++ ++|+++.++.|...
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~ 165 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAE 165 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCC
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCc
Confidence 89999999 79999999999754
No 168
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.25 E-value=2.2e-11 Score=110.38 Aligned_cols=95 Identities=9% Similarity=0.102 Sum_probs=79.1
Q ss_pred CChhHHHHHhcc-CCcEEEEEecCC--ChhhHHHHHHHHHHHHHcCC------ceEEEEECcCChHHHHhCCcccCcEEE
Q psy6451 138 PDEKKFFDLCKK-SPNMVVHFYKDG--SVNCKILDEHMKTLCKKHLE------TRFIKLNVERAPFLTERLRIKVIPTLT 208 (332)
Q Consensus 138 ~~e~~~~~~~~~-~~~VvV~Fya~w--c~~Ck~l~~~l~~La~~~~~------v~f~kVd~~~~~~l~~~~~I~~~PTl~ 208 (332)
.+.++|.+.+.. ..+|+|+||++| |++|+.+.+.++++|+.++. +.|+++|++..+.++++|+|.++||++
T Consensus 12 ~~~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~ 91 (243)
T 2hls_A 12 DFRRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVA 91 (243)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEE
Confidence 344556666643 589999999999 99999999999999999765 999999999999999999999999999
Q ss_pred EEeCCeeeeeEecccCcchhhHhHHHH
Q psy6451 209 LVKDSVTKDYIVGFTELGNCADFSTEM 235 (332)
Q Consensus 209 ~~~~G~~v~~~~G~~~~~~~~~f~~~~ 235 (332)
+| +| ..++.|......+..|+...
T Consensus 92 i~-~g--~~~~~G~~~~~~l~~fv~~~ 115 (243)
T 2hls_A 92 FL-GG--EVRWTGIPAGEEIRALVEVI 115 (243)
T ss_dssp ET-TT--TEEEESCCCTTHHHHHHHHH
T ss_pred EE-CC--ceeEcCCCcHHHHHHHHHHH
Confidence 99 77 77888887655555555443
No 169
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.20 E-value=5.7e-11 Score=113.52 Aligned_cols=88 Identities=11% Similarity=0.185 Sum_probs=73.4
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC---------------------------ChHHHHhC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER---------------------------APFLTERL 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~---------------------------~~~l~~~~ 199 (332)
++++|||+||++||++|+.+.|.|.+++.+|.+ +.|+.|+++. ...+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 478999999999999999999999999999974 8999998642 34688999
Q ss_pred CcccCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHH
Q psy6451 200 RIKVIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEML 236 (332)
Q Consensus 200 ~I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~L 236 (332)
+|.++||++++ ++|+++.++.|..+...+..++.+.|
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp TCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999888 79999999999776655544444433
No 170
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.20 E-value=4.8e-11 Score=103.20 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=62.3
Q ss_pred cCC-cEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECc-----------------------------CChHHH
Q psy6451 149 KSP-NMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE-----------------------------RAPFLT 196 (332)
Q Consensus 149 ~~~-~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~-----------------------------~~~~l~ 196 (332)
+++ +|||+||++||++|+.+.|.|.+++.+|.+ +.|+.|+++ ....++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 345 599999999999999999999999999874 899999983 345788
Q ss_pred HhCCcccCcEEEEE-eCCeeeeeEe
Q psy6451 197 ERLRIKVIPTLTLV-KDSVTKDYIV 220 (332)
Q Consensus 197 ~~~~I~~~PTl~~~-~~G~~v~~~~ 220 (332)
..|+|.++||++++ ++|+++.+..
T Consensus 124 ~~~~v~~~P~~~lid~~G~i~~~~~ 148 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKCVYRGQ 148 (196)
T ss_dssp HHHTCCEESEEEEEETTCBEEEEEC
T ss_pred HHhCCCCCCeEEEEcCCCeEEEccc
Confidence 99999999999998 6999998743
No 171
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.19 E-value=2.4e-11 Score=102.71 Aligned_cols=74 Identities=8% Similarity=0.078 Sum_probs=67.0
Q ss_pred eEecCCchhhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCccccc
Q psy6451 64 YEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
+.+|++..+|.+.+. .+.+|||+|||+||+.|+.|+|.|++||..+.+ +.|+++|+++.|-+....+...++++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEE
Confidence 688999999998884 567899999999999999999999999999986 89999999999999999888776665
No 172
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.18 E-value=6.6e-11 Score=97.26 Aligned_cols=73 Identities=8% Similarity=0.077 Sum_probs=63.3
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCCh--------------------------HHHHhCC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERAP--------------------------FLTERLR 200 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~~--------------------------~l~~~~~ 200 (332)
++++|||+||++||++|+.+.|.|.++.++|.+ +.|+.|+.+..+ .++..|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 568999999999999999999999999999974 899999887543 4678899
Q ss_pred cccCcEEEEEe-CCeeeeeEec
Q psy6451 201 IKVIPTLTLVK-DSVTKDYIVG 221 (332)
Q Consensus 201 I~~~PTl~~~~-~G~~v~~~~G 221 (332)
|.++||++++. +|+++.+..+
T Consensus 111 v~~~P~~~lid~~G~i~~~~~~ 132 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVIIAANVT 132 (143)
T ss_dssp GGGCCCEEEECTTSBEEEESCC
T ss_pred CCCCCcEEEECCCCEEEEccCC
Confidence 99999988885 9999987654
No 173
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.18 E-value=6.9e-12 Score=116.67 Aligned_cols=78 Identities=10% Similarity=0.054 Sum_probs=58.5
Q ss_pred hHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEE---C-cCChHHHHhCCcccCcEEEEEeCCeee
Q psy6451 141 KKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLN---V-ERAPFLTERLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 141 ~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd---~-~~~~~l~~~~~I~~~PTl~~~~~G~~v 216 (332)
..+.+.+++.. +|.|||||||+|+.+.|.+++++++++ ++.++ . ++++.++++|+|+++||+++ +|+.
T Consensus 190 ~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~---~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~~- 261 (291)
T 3kp9_A 190 VGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT- 261 (291)
T ss_dssp HHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTEE-
T ss_pred HHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcC---EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCEE-
Confidence 34444454443 689999999999999999999997764 33333 2 33789999999999999554 9974
Q ss_pred eeEecccCcchh
Q psy6451 217 DYIVGFTELGNC 228 (332)
Q Consensus 217 ~~~~G~~~~~~~ 228 (332)
+.|..+...+
T Consensus 262 --~~G~~~~~~L 271 (291)
T 3kp9_A 262 --YTGVRSLEAL 271 (291)
T ss_dssp --EESCCCHHHH
T ss_pred --ecCCCCHHHH
Confidence 7887766544
No 174
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.17 E-value=8.8e-11 Score=101.07 Aligned_cols=70 Identities=14% Similarity=0.163 Sum_probs=62.8
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECc-----------------------------CChHHHHh
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE-----------------------------RAPFLTER 198 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~-----------------------------~~~~l~~~ 198 (332)
++++|||+||++||++|+.+.|.|.+++.+|.+ +.|+.|+++ ....++..
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 468999999999999999999999999999988 899999873 34568899
Q ss_pred CCcccCcEEEEE-eCCeeeee
Q psy6451 199 LRIKVIPTLTLV-KDSVTKDY 218 (332)
Q Consensus 199 ~~I~~~PTl~~~-~~G~~v~~ 218 (332)
|++.++||++++ ++|+++.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 112 YRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp TTCCEESEEEEECTTCBEEEE
T ss_pred cCCCCCCeEEEECCCCcEEEE
Confidence 999999999999 68998877
No 175
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.15 E-value=5.3e-11 Score=97.84 Aligned_cols=64 Identities=25% Similarity=0.485 Sum_probs=57.9
Q ss_pred hcCcceEecCCchhhhhhhcCC---CcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCC
Q psy6451 59 LGHGEYEEIPDEKKFFDLCKKS---PNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAP 123 (332)
Q Consensus 59 ~g~G~~~ev~~e~~f~~~~~~~---~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~p 123 (332)
.+||.+.+| +..+|.+.+... .+|||+||+|||++|+.|.++|.+||..|+.+.|+++++...+
T Consensus 7 ~~~g~v~~i-~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~ 73 (135)
T 2dbc_A 7 GKFGELREI-SGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCI 73 (135)
T ss_dssp CCCCSCEEC-CHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSC
T ss_pred CCCCceEEc-CHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCc
Confidence 579999999 688999988653 4799999999999999999999999999999999999998764
No 176
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.14 E-value=9.1e-11 Score=91.83 Aligned_cols=62 Identities=13% Similarity=0.159 Sum_probs=54.1
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc--CChHHHHhCCcccCcEEEEEeCCeee
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE--RAPFLTERLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~--~~~~l~~~~~I~~~PTl~~~~~G~~v 216 (332)
...++|+.||++||++|+.+.+.|++++.. +.|..+|++ ..+.++.+|+ .++|++ |.+|+.+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~~---i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~ 77 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKDR---FILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL 77 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSSS---SEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhhC---CeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE
Confidence 456789999999999999999999877643 899999998 7899999999 999986 5688875
No 177
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.13 E-value=3.2e-11 Score=89.98 Aligned_cols=62 Identities=16% Similarity=0.287 Sum_probs=51.9
Q ss_pred EEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECc-CChHHHHhCCcccCcEEEEEeCCeeee
Q psy6451 154 VVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE-RAPFLTERLRIKVIPTLTLVKDSVTKD 217 (332)
Q Consensus 154 vV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~-~~~~l~~~~~I~~~PTl~~~~~G~~v~ 217 (332)
++.||+|||++|+.+.|.+++++.++.. +.++.|+.+ ..+.++++|++.++||+++ +|+.+.
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~~ 67 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAFH 67 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEEE
Confidence 6789999999999999999999877643 566666665 5788999999999999987 998653
No 178
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.13 E-value=1.2e-10 Score=87.22 Aligned_cols=63 Identities=13% Similarity=0.256 Sum_probs=55.2
Q ss_pred EEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCCh----HHHHhCC--cccCcEEEEEeCCeeee
Q psy6451 153 MVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAP----FLTERLR--IKVIPTLTLVKDSVTKD 217 (332)
Q Consensus 153 VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~----~l~~~~~--I~~~PTl~~~~~G~~v~ 217 (332)
-|+.||++||++|+.+.+.|++++.+++++.|..+|++..+ .+++.++ +.++||+ |.+|+.+.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~ 70 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG 70 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE
Confidence 36789999999999999999999999889999999987654 7899999 9999998 45887653
No 179
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.12 E-value=6.3e-10 Score=99.37 Aligned_cols=150 Identities=11% Similarity=0.044 Sum_probs=110.8
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC--------CCCcccc-cCCC
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE--------RAPFLTG-QQGH 131 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~--------k~pfl~~-k~g~ 131 (332)
.....+|++.++|.++++..+.+||.||+|| |+.+.+.|.++|..+..+.|....-. ..|.++. +...
T Consensus 8 ~~~~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~~p~i~lfk~~~ 84 (227)
T 4f9z_D 8 AQEPTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITGNTICLFRLVD 84 (227)
T ss_dssp -CCCEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTCTTSEEEEECCHHHHHHTTCCSSEEEEEETTT
T ss_pred cCCCeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhCCCceEEEECCHHHHHHcCCCCCeEEEEEecC
Confidence 3468899999999999999999999999997 68899999999999877777644321 1122211 1100
Q ss_pred ----------------------------CcccccCChhHHHHHhccC-CcEEEEEecCCChhhHHHHHHHHHHHHHcCC-
Q psy6451 132 ----------------------------GEYEEIPDEKKFFDLCKKS-PNMVVHFYKDGSVNCKILDEHMKTLCKKHLE- 181 (332)
Q Consensus 132 ----------------------------g~~~ei~~e~~~~~~~~~~-~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~- 181 (332)
+.+.+++ ...+......+ ..+++.|+.+||+.|..+.+.|.++|++|.+
T Consensus 85 ~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t-~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~ 163 (227)
T 4f9z_D 85 NEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYN-PVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK 163 (227)
T ss_dssp TEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECC-HHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT
T ss_pred cccccccccccCCCCHHHHHHHHHHhCCCceeecC-cccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC
Confidence 1122332 33445555555 4455667799999999999999999999987
Q ss_pred ceEEEEECc--CChHHHHhCCcc--cCcEEEEEeCCe
Q psy6451 182 TRFIKLNVE--RAPFLTERLRIK--VIPTLTLVKDSV 214 (332)
Q Consensus 182 v~f~kVd~~--~~~~l~~~~~I~--~~PTl~~~~~G~ 214 (332)
+.|+.+|++ ..+.+++.||+. .+|++.++..+.
T Consensus 164 i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~ 200 (227)
T 4f9z_D 164 ILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLD 200 (227)
T ss_dssp CEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSS
T ss_pred EEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCC
Confidence 999999996 466788999998 899999998543
No 180
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.12 E-value=2.9e-11 Score=94.32 Aligned_cols=74 Identities=4% Similarity=0.058 Sum_probs=52.4
Q ss_pred eEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccccc
Q psy6451 64 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
+.+|++.++|.++++++.+++|+||+|||++|+.+.+.|.+++..++++.|+++|++..+.++.+.+...++++
T Consensus 2 m~~i~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 75 (105)
T 4euy_A 2 MNTFKTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVFTGPTV 75 (105)
T ss_dssp --------CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC---------CCCCEE
T ss_pred ccccCCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCCCCCEE
Confidence 35677888999999888999999999999999999999999999999999999999998888777776655543
No 181
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.72 E-value=6.4e-12 Score=102.72 Aligned_cols=71 Identities=18% Similarity=0.219 Sum_probs=61.2
Q ss_pred cCC-cEEEEEecCCChhhHHHHHHHHHHHHHc----CCceEEEEECcCC-------------------------hHHHHh
Q psy6451 149 KSP-NMVVHFYKDGSVNCKILDEHMKTLCKKH----LETRFIKLNVERA-------------------------PFLTER 198 (332)
Q Consensus 149 ~~~-~VvV~Fya~wc~~Ck~l~~~l~~La~~~----~~v~f~kVd~~~~-------------------------~~l~~~ 198 (332)
+++ ++||+||++||++|+.+.|.|.+++.++ +++.++.|+++.. ..++..
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 355 9999999999999999999999999988 4588888887754 268889
Q ss_pred CCcccCcEEEEEe-CCeeeeeE
Q psy6451 199 LRIKVIPTLTLVK-DSVTKDYI 219 (332)
Q Consensus 199 ~~I~~~PTl~~~~-~G~~v~~~ 219 (332)
|+|.++||++++. +|+++.+.
T Consensus 104 ~~v~~~P~~~lid~~G~i~~~~ 125 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLISMN 125 (143)
Confidence 9999999999996 89988774
No 182
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.11 E-value=4.5e-10 Score=112.60 Aligned_cols=150 Identities=9% Similarity=0.090 Sum_probs=97.6
Q ss_pred CcceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh----ceeeecccCC--CCcccccCCCCc
Q psy6451 61 HGEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE----TRFIKLNVER--APFLTGQQGHGE 133 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~----~~f~kvd~~k--~pfl~~k~g~g~ 133 (332)
.+.|.+++ .++|.+.+ +++.+|||.||++||++|+.+.|.|.++|..+.+ +.|+++|+.. .+-++.+.+...
T Consensus 11 ~~~V~~Lt-~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 11 SDPLTLLD-ADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp TSSSEEEC-TTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCCcEECC-hHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 35688885 57888877 4558899999999999999999999999999986 8899999843 222222211111
Q ss_pred cc-------------------------------------------------ccCChhHHHHHhc--cCCcEEEEEecCCC
Q psy6451 134 YE-------------------------------------------------EIPDEKKFFDLCK--KSPNMVVHFYKDGS 162 (332)
Q Consensus 134 ~~-------------------------------------------------ei~~e~~~~~~~~--~~~~VvV~Fya~wc 162 (332)
++ +..+..++...+. ...++++.|+....
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s 169 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDS 169 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTC
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCch
Confidence 00 0011233333332 23567788887652
Q ss_pred hhhHHHHHHHHHHHHHc---CCceEEEEECcCChHHHHhCCcccCcEEEEEeCCeeeeeE
Q psy6451 163 VNCKILDEHMKTLCKKH---LETRFIKLNVERAPFLTERLRIKVIPTLTLVKDSVTKDYI 219 (332)
Q Consensus 163 ~~Ck~l~~~l~~La~~~---~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~ 219 (332)
. ....++..+ +.+.+..+ .+....++++|+|..+||+++|..+..+.++
T Consensus 170 ~-------~~~~~~ldl~~~~~v~v~~v-~~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~ 221 (519)
T 3t58_A 170 Y-------LGREVTLDLSQYHAVAVRRV-LNTESDLVNKFGVTDFPSCYLLLRNGSVSRV 221 (519)
T ss_dssp C-------HHHHHHHHTTTCTTEEEEEE-ETTCHHHHHHHTCCCSSEEEEEETTSCEEEC
T ss_pred H-------HHHHHHHHhhccCCeeEEEe-cCchHHHHHHcCCCCCCeEEEEeCCCceeec
Confidence 2 334444444 33665444 4556789999999999999999754433333
No 183
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.09 E-value=9.6e-11 Score=91.42 Aligned_cols=75 Identities=13% Similarity=0.177 Sum_probs=64.2
Q ss_pred ceEecCCchhhhhhh--cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccccc
Q psy6451 63 EYEEIPDEKKFFDLC--KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~--~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.+.+|+++.+|.+.+ .++.+++|+||+|||++|+.+.+.|.+++..++++.|+++|++..+-++...+...++++
T Consensus 2 ~v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTF 78 (107)
T ss_dssp CEEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred ceEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCCcccEE
Confidence 467888899999999 568899999999999999999999999999999999999999887766666665555443
No 184
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.09 E-value=5.1e-10 Score=94.32 Aligned_cols=90 Identities=11% Similarity=0.135 Sum_probs=70.7
Q ss_pred cCCcEEEEEecCCChh-hHHHHHHHHHHHHHc------CCceEEEEECcCC----------------------------h
Q psy6451 149 KSPNMVVHFYKDGSVN-CKILDEHMKTLCKKH------LETRFIKLNVERA----------------------------P 193 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~-Ck~l~~~l~~La~~~------~~v~f~kVd~~~~----------------------------~ 193 (332)
+++++||.||++||++ |....|.|.++..+| .++.|+.|+++.. .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4689999999999998 999999999999988 4689999888731 1
Q ss_pred HHHHhCCcccCc---------------EEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHHHH
Q psy6451 194 FLTERLRIKVIP---------------TLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRIAQ 242 (332)
Q Consensus 194 ~l~~~~~I~~~P---------------Tl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~~ 242 (332)
.+++.|++..+| +++++ ++|+++.++.|..+... +.+.|+.+|..
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~----l~~~l~~ll~~ 165 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQ----ISDSVRRHMAA 165 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHH----HHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHH----HHHHHHHHHHH
Confidence 478899999888 66665 79999999998765433 34445555543
No 185
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.09 E-value=4.3e-11 Score=95.34 Aligned_cols=78 Identities=19% Similarity=0.376 Sum_probs=68.5
Q ss_pred hcCcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 59 LGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 59 ~g~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+|+|.+.+++++..|.+++++++++||.||+|||+.|+.+.+.|.+++..++++.|+.++++..+-++.+.+...+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 86 (114)
T 2oe3_A 9 SSYTSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPT 86 (114)
T ss_dssp CCGGGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSBSE
T ss_pred cchhheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCcccE
Confidence 578999999999999999998999999999999999999999999999999999999999987766666666555444
No 186
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.07 E-value=1.1e-10 Score=91.91 Aligned_cols=78 Identities=15% Similarity=0.255 Sum_probs=67.3
Q ss_pred cCcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccccc
Q psy6451 60 GHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
++|.....++..+|.+++.+++++||.||++||++|+.+.+.|.+++..++++.|+.++++..+.++.+.+...++++
T Consensus 4 ~~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 81 (109)
T 3f3q_A 4 HHHMVTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTL 81 (109)
T ss_dssp SCCCCEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCccCEE
Confidence 455566667889999999999999999999999999999999999999999999999999987777777666655543
No 187
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.07 E-value=8.2e-10 Score=92.86 Aligned_cols=74 Identities=12% Similarity=0.111 Sum_probs=65.3
Q ss_pred cCCc-EEEEEe-cCCChhhHHHHHHHHHHHHHcCC--ceEEEEECc---------------------CChHHHHhCCccc
Q psy6451 149 KSPN-MVVHFY-KDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE---------------------RAPFLTERLRIKV 203 (332)
Q Consensus 149 ~~~~-VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~---------------------~~~~l~~~~~I~~ 203 (332)
.+++ |||.|| ++||++|....|.|.+++.+|.+ +.|+.|+.+ ....+++.|++.+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 3565 999999 99999999999999999999864 899999887 4557889999999
Q ss_pred ----CcEEEEE-eCCeeeeeEecc
Q psy6451 204 ----IPTLTLV-KDSVTKDYIVGF 222 (332)
Q Consensus 204 ----~PTl~~~-~~G~~v~~~~G~ 222 (332)
+|+++++ ++|+++..+.|.
T Consensus 107 ~~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 107 FILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp SSSCCCEEEEECTTSBEEEEEECS
T ss_pred cCcccceEEEECCCCEEEEEEecC
Confidence 9998888 699999999994
No 188
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.05 E-value=2.4e-10 Score=96.27 Aligned_cols=75 Identities=12% Similarity=0.056 Sum_probs=63.1
Q ss_pred cCCcEEEEEecCCChh-hHHHHHHHHHHHHHcC-----CceEEEEECcCC----------------------------hH
Q psy6451 149 KSPNMVVHFYKDGSVN-CKILDEHMKTLCKKHL-----ETRFIKLNVERA----------------------------PF 194 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~-Ck~l~~~l~~La~~~~-----~v~f~kVd~~~~----------------------------~~ 194 (332)
+++++||.||++||++ |....|.|.+++.+|. ++.|+.|+++.. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5789999999999997 9999999999999987 689999998743 24
Q ss_pred HHHhCC---------------cccCcEEEEEeCCeeeeeEeccc
Q psy6451 195 LTERLR---------------IKVIPTLTLVKDSVTKDYIVGFT 223 (332)
Q Consensus 195 l~~~~~---------------I~~~PTl~~~~~G~~v~~~~G~~ 223 (332)
+++.|+ +..+||++++.+|+++.++.|..
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~ 157 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDK 157 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCC
Confidence 555554 56899999999999999988854
No 189
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.04 E-value=1.1e-10 Score=93.11 Aligned_cols=79 Identities=15% Similarity=0.223 Sum_probs=66.2
Q ss_pred hcCcceEecCCchhhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 59 LGHGEYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 59 ~g~G~~~ev~~e~~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.++|.....++.++|.+++. +++++||+||++||++|+.+.+.|.+++..++++.|++++++..+-++...+...+++
T Consensus 8 ~~~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (116)
T 3qfa_C 8 HHHGSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPT 87 (116)
T ss_dssp ----CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred ccCCcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCccccE
Confidence 35677788888999999998 8899999999999999999999999999999999999999998777777666655544
Q ss_pred c
Q psy6451 137 I 137 (332)
Q Consensus 137 i 137 (332)
+
T Consensus 88 ~ 88 (116)
T 3qfa_C 88 F 88 (116)
T ss_dssp E
T ss_pred E
Confidence 3
No 190
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.04 E-value=6.6e-10 Score=92.82 Aligned_cols=89 Identities=12% Similarity=0.138 Sum_probs=69.1
Q ss_pred cCCcEEEEEecCCChh-hHHHHHHHHHHHHHcC------CceEEEEECcCC----------------------------h
Q psy6451 149 KSPNMVVHFYKDGSVN-CKILDEHMKTLCKKHL------ETRFIKLNVERA----------------------------P 193 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~-Ck~l~~~l~~La~~~~------~v~f~kVd~~~~----------------------------~ 193 (332)
+++++||.||++||++ |....|.|.++..++. ++.|+.|+++.. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 9999999999998873 688888887642 1
Q ss_pred HHHHhCCcccCc---------------EEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHHH
Q psy6451 194 FLTERLRIKVIP---------------TLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRIA 241 (332)
Q Consensus 194 ~l~~~~~I~~~P---------------Tl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~ 241 (332)
.+++.|++..+| +++++ ++|+++.++.|..+...+ .+.|+..|.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l----~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEI----AASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHH----HHHHHHHHG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHH----HHHHHHHHH
Confidence 378899999999 55555 799999999887654333 344444443
No 191
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=2.4e-11 Score=101.57 Aligned_cols=74 Identities=9% Similarity=0.094 Sum_probs=61.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHH-HHHHcC---CceEEEEECcCChHHHHhCC------------------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKT-LCKKHL---ETRFIKLNVERAPFLTERLR------------------------ 200 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~-La~~~~---~v~f~kVd~~~~~~l~~~~~------------------------ 200 (332)
+++++||.||++||++|+.+.|.|.+ +..++. ++.|+.|+++..+..+.+|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 56899999999999999999999998 888776 48899998876654444333
Q ss_pred cccCcEEEEE-eCCeeeeeEecc
Q psy6451 201 IKVIPTLTLV-KDSVTKDYIVGF 222 (332)
Q Consensus 201 I~~~PTl~~~-~~G~~v~~~~G~ 222 (332)
+.++||++++ ++|+++.++.|.
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g~ 134 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRLY 134 (159)
Confidence 6779999999 799999988774
No 192
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.03 E-value=2e-10 Score=88.73 Aligned_cols=73 Identities=15% Similarity=0.257 Sum_probs=63.7
Q ss_pred eEecCCchhhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 64 YEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+.+|++.++|.+.+. ++++++|+||+|||++|+.+.+.+.+++..++++.|+.++++..+-++...+...+++
T Consensus 2 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 76 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPT 76 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCCBSSE
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCCcCcE
Confidence 567888999999998 7889999999999999999999999999999999999999988776666666555544
No 193
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.02 E-value=9.9e-10 Score=97.47 Aligned_cols=70 Identities=10% Similarity=0.150 Sum_probs=61.4
Q ss_pred cCC-cEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECc-----------------------------CChHHH
Q psy6451 149 KSP-NMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE-----------------------------RAPFLT 196 (332)
Q Consensus 149 ~~~-~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~-----------------------------~~~~l~ 196 (332)
.++ +|||.||++||++|+.+.|.|.+++++|.+ +.|+.|+++ ....++
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~ 136 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVA 136 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHH
Confidence 356 499999999999999999999999999975 899999983 345789
Q ss_pred HhCCcccCcEEEEE-eCCeeeee
Q psy6451 197 ERLRIKVIPTLTLV-KDSVTKDY 218 (332)
Q Consensus 197 ~~~~I~~~PTl~~~-~~G~~v~~ 218 (332)
..|++.++|+++++ ++|+++.+
T Consensus 137 ~~~~v~~~P~~~liD~~G~i~~~ 159 (218)
T 3u5r_E 137 KAYGAACTPDFFLYDRERRLVYH 159 (218)
T ss_dssp HHHTCCEESEEEEECTTCBEEEE
T ss_pred HHcCCCCCCeEEEECCCCcEEEe
Confidence 99999999999999 79998754
No 194
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.02 E-value=9.2e-10 Score=94.85 Aligned_cols=92 Identities=13% Similarity=0.131 Sum_probs=73.0
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC-------------------------ChHHHHhCC
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER-------------------------APFLTERLR 200 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~-------------------------~~~l~~~~~ 200 (332)
+++++||+|| ++||++|....|.|.+++.+|. ++.|+.|+.+. ...+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 4689999999 9999999999999999999886 58899988764 346788999
Q ss_pred cc------cCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 201 IK------VIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 201 I~------~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
+. .+||++++ ++|+++..+.|....+...+-+.+.|+.++
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99 99999999 799999999987532221233344555544
No 195
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.01 E-value=2.2e-09 Score=90.62 Aligned_cols=96 Identities=7% Similarity=0.139 Sum_probs=71.0
Q ss_pred hccCCcEEEEEecCCChhhHHHHHHH---HHHHHHc-CCceEEEEECcC--ChHHHHhCCcccCcEEEEEe-C-Ceeeee
Q psy6451 147 CKKSPNMVVHFYKDGSVNCKILDEHM---KTLCKKH-LETRFIKLNVER--APFLTERLRIKVIPTLTLVK-D-SVTKDY 218 (332)
Q Consensus 147 ~~~~~~VvV~Fya~wc~~Ck~l~~~l---~~La~~~-~~v~f~kVd~~~--~~~l~~~~~I~~~PTl~~~~-~-G~~v~~ 218 (332)
-..+++|+|+||++||..|+.|.... ..++... ..+.++++|++. ...+.+.|++.++||++++. + |+.+..
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 35689999999999999999997554 3333333 257889999865 34578999999999999995 4 888877
Q ss_pred EecccCcchhhHhHHHHHHHHHHHcCCcc
Q psy6451 219 IVGFTELGNCADFSTEMLEWRIAQAGVID 247 (332)
Q Consensus 219 ~~G~~~~~~~~~f~~~~Le~~L~~~g~l~ 247 (332)
+.| .+. .+| .+.|..++..++.+.
T Consensus 119 ~~g-~~~---~~f-l~~L~~~l~~~~~~~ 142 (153)
T 2dlx_A 119 WHQ-LDV---SSF-LDQVTGFLGEHGQLD 142 (153)
T ss_dssp ESS-CCH---HHH-HHHHHHHHHHTCSCS
T ss_pred cCC-CCH---HHH-HHHHHHHHHhcCCCC
Confidence 655 322 333 456777888887775
No 196
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1e-09 Score=93.17 Aligned_cols=79 Identities=10% Similarity=0.049 Sum_probs=60.9
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECc-----------CChHHH-------------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE-----------RAPFLT------------------- 196 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~-----------~~~~l~------------------- 196 (332)
++++|||.||++||++|+ ..|.|.+++.+|.+ +.|+.|+++ .....+
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 578999999999999999 99999999999865 888888763 111111
Q ss_pred -----------HhCCcccCc------EEEEE-eCCeeeeeEecccCcchh
Q psy6451 197 -----------ERLRIKVIP------TLTLV-KDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 197 -----------~~~~I~~~P------Tl~~~-~~G~~v~~~~G~~~~~~~ 228 (332)
..|++.++| |++++ ++|+++.++.|..+...+
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l 159 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSL 159 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGG
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHH
Confidence 247899999 65555 899999999997665544
No 197
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.00 E-value=2e-09 Score=90.26 Aligned_cols=82 Identities=11% Similarity=0.017 Sum_probs=61.5
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC-------Ch----HH-HHhC---------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER-------AP----FL-TERL--------------- 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~-------~~----~l-~~~~--------------- 199 (332)
++++|||.||++||++|....|.|.++..+|.+ +.++.|+++. .+ .. .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 578999999999999999999999999999875 8999998753 11 11 1211
Q ss_pred --------------C-----cccCcEEEEE-eCCeeeeeEecccCcchhhH
Q psy6451 200 --------------R-----IKVIPTLTLV-KDSVTKDYIVGFTELGNCAD 230 (332)
Q Consensus 200 --------------~-----I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~ 230 (332)
+ |..+|+++++ ++|+++.++.|..+...+..
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 160 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEG 160 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHH
Confidence 3 4445776666 79999999999766544433
No 198
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.99 E-value=3.4e-10 Score=88.87 Aligned_cols=74 Identities=15% Similarity=0.244 Sum_probs=61.5
Q ss_pred eEecCCchhhhhhhcC---CCcEEEEEccCCChhhhhhHHHHHHHHHh--hhhceeeecccCCCCcccccCCCCccccc
Q psy6451 64 YEEIPDEKKFFDLCKK---SPNMVVHFYKDGSVNCKILDEHMKTLCKK--HLETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~~---~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~--~~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
|.+|++..+|.+++.+ +.+++|+||++||++|+.+.+.|.+++.. ++++.|+.+++...+-++...+...++++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEE
Confidence 6788887999999976 78899999999999999999999999999 67899999999887766666666555543
No 199
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.99 E-value=3.3e-10 Score=91.88 Aligned_cols=74 Identities=11% Similarity=0.172 Sum_probs=65.3
Q ss_pred eEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccccc
Q psy6451 64 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
+.+|+++++|.+++.++.++||.||++||++|+.+.+.|.+++..++++.|+.++++..+.++...+...++++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 94 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQLPTF 94 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCcccEE
Confidence 78898879999999888999999999999999999999999999999999999999987777766666555543
No 200
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.99 E-value=1.3e-09 Score=90.92 Aligned_cols=77 Identities=8% Similarity=0.083 Sum_probs=64.8
Q ss_pred cCC-cEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC-----------------------ChHHHHhCCc
Q psy6451 149 KSP-NMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER-----------------------APFLTERLRI 201 (332)
Q Consensus 149 ~~~-~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~-----------------------~~~l~~~~~I 201 (332)
.++ ++||.|| ++||++|....|.|.+++.+|. ++.|+.|+++. ...+++.|++
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 113 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV 113 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC
Confidence 345 8999998 9999999999999999999985 48899888763 5668899999
Q ss_pred c----cCc--EEEEE-eCCeeeeeEecccCc
Q psy6451 202 K----VIP--TLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 202 ~----~~P--Tl~~~-~~G~~v~~~~G~~~~ 225 (332)
. ++| +++++ ++|+++.++.|....
T Consensus 114 ~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~ 144 (160)
T 1xvw_A 114 FNEQAGIANRGTFVVDRSGIIRFAEMKQPGE 144 (160)
T ss_dssp EETTTTEECSEEEEECTTSBEEEEEECCTTC
T ss_pred ccccCCCeeeeEEEECCCCeEEEEEecCCCC
Confidence 9 999 55555 799999999987543
No 201
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.98 E-value=4.2e-10 Score=88.83 Aligned_cols=78 Identities=12% Similarity=0.169 Sum_probs=66.2
Q ss_pred hcCcceEecCCchhhhhhhcC----CCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcc
Q psy6451 59 LGHGEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEY 134 (332)
Q Consensus 59 ~g~G~~~ev~~e~~f~~~~~~----~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~ 134 (332)
.++|.+.+|++..+|.+.+.. +.++||.||++||++|+.+.+.|.+++..++++.|+.++++..+.++...+...+
T Consensus 3 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 82 (118)
T 2vm1_A 3 AEEGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVEAM 82 (118)
T ss_dssp --CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSB
T ss_pred CCCCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCCcC
Confidence 457899999999999999865 7899999999999999999999999999999999999999877666666665554
Q ss_pred cc
Q psy6451 135 EE 136 (332)
Q Consensus 135 ~e 136 (332)
++
T Consensus 83 Pt 84 (118)
T 2vm1_A 83 PT 84 (118)
T ss_dssp SE
T ss_pred cE
Confidence 43
No 202
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.98 E-value=1.5e-09 Score=94.32 Aligned_cols=77 Identities=12% Similarity=0.112 Sum_probs=66.7
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC-------------------------ChHHHHhCC
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER-------------------------APFLTERLR 200 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~-------------------------~~~l~~~~~ 200 (332)
+++++||.|| ++||++|....|.|.+++.+|. ++.|+.|+.+. ...++..|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 4689999999 9999999999999999999986 48999998763 345788899
Q ss_pred cc-----cCcEEEEE-eCCeeeeeEecccCc
Q psy6451 201 IK-----VIPTLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 201 I~-----~~PTl~~~-~~G~~v~~~~G~~~~ 225 (332)
+. .+|+++++ ++|+++..+.|....
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~ 154 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSV 154 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTC
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCC
Confidence 99 99999999 599999999987543
No 203
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.97 E-value=3.2e-10 Score=88.77 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=64.0
Q ss_pred cceEecCCchhhhhhhcC----CCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCcccc
Q psy6451 62 GEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~----~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
|.+.+|++..+|.+.+.. +.++||.||++||++|+.+.+.|.+++..++ .+.|+.++++..+.++...+...+++
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 81 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPT 81 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSE
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccE
Confidence 578999888999999976 7899999999999999999999999999998 79999999987666666555554443
No 204
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.97 E-value=1.6e-09 Score=93.83 Aligned_cols=89 Identities=13% Similarity=0.022 Sum_probs=66.8
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC-------Ch----HHH-H-----------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER-------AP----FLT-E----------------- 197 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~-------~~----~l~-~----------------- 197 (332)
++++|||.||++||++|....|.|.++..+|.+ +.|+.|+++. .+ ..+ +
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 578999999999999999999999999999875 8999998762 11 112 1
Q ss_pred ------------hCCcccCc------EEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHHH
Q psy6451 198 ------------RLRIKVIP------TLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRIA 241 (332)
Q Consensus 198 ------------~~~I~~~P------Tl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~ 241 (332)
.|++.++| |++++ ++|+++.++.|..+... +.+.|+.+|.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~----l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKD----IEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHH----HHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHH----HHHHHHHHHh
Confidence 25888899 55555 79999999998765433 3444555553
No 205
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.97 E-value=3.4e-10 Score=94.71 Aligned_cols=79 Identities=23% Similarity=0.356 Sum_probs=66.7
Q ss_pred hcCcceEecCCchhhhhhhcC--CCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 59 LGHGEYEEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 59 ~g~G~~~ev~~e~~f~~~~~~--~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
..+|.+.++++.++|.+++.. ++++||.||+|||++|+.+.+.|.+++..++.+.|+++++...+.++.+.+...+++
T Consensus 9 ~~~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 88 (153)
T 2wz9_A 9 AAVAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPT 88 (153)
T ss_dssp ---CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred cccCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCCCCCE
Confidence 346889999988999999987 889999999999999999999999999999999999999988776666666555544
Q ss_pred c
Q psy6451 137 I 137 (332)
Q Consensus 137 i 137 (332)
+
T Consensus 89 ~ 89 (153)
T 2wz9_A 89 F 89 (153)
T ss_dssp E
T ss_pred E
Confidence 3
No 206
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.96 E-value=4.3e-10 Score=94.11 Aligned_cols=75 Identities=12% Similarity=0.141 Sum_probs=65.1
Q ss_pred ceEecCCchhhhhhh--cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCccccc
Q psy6451 63 EYEEIPDEKKFFDLC--KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~--~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.+..+.+.++|.+.+ .++.+|||+||+|||++|+.+.|.|.+++..+.+ +.|+++|++..+.++...+...++++
T Consensus 4 ~l~~i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~ 81 (149)
T 3gix_A 4 LLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPST 81 (149)
T ss_dssp SCCEECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEE
T ss_pred ceeecCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeE
Confidence 466777889999998 4578999999999999999999999999999988 99999999988888877776666554
No 207
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.95 E-value=7.5e-10 Score=86.47 Aligned_cols=92 Identities=17% Similarity=0.200 Sum_probs=65.2
Q ss_pred HHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC-------hHHHHhCCcccCcEEEEEeCCee
Q psy6451 143 FFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA-------PFLTERLRIKVIPTLTLVKDSVT 215 (332)
Q Consensus 143 ~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~-------~~l~~~~~I~~~PTl~~~~~G~~ 215 (332)
+.+.++++ .|+.|+++||++|+.+.+.|+.+...++. |..+|++.. ..+.+.+++.++||+ |.+|+.
T Consensus 5 ~~~~i~~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~~ 78 (105)
T 1kte_A 5 VNSKIQPG--KVVVFIKPTCPFCRKTQELLSQLPFKEGL--LEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKEC 78 (105)
T ss_dssp HHHHCCTT--CEEEEECSSCHHHHHHHHHHHHSCBCTTS--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTEE
T ss_pred HHhhcccC--CEEEEEcCCCHhHHHHHHHHHHcCCCCCc--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCEE
Confidence 34444443 35669999999999999999988766654 666777765 257888999999997 458876
Q ss_pred eeeEecccCcchhhHhH-HHHHHHHHHHcCCc
Q psy6451 216 KDYIVGFTELGNCADFS-TEMLEWRIAQAGVI 246 (332)
Q Consensus 216 v~~~~G~~~~~~~~~f~-~~~Le~~L~~~g~l 246 (332)
+. |+.. +..+. ...|+.+|...|++
T Consensus 79 i~---g~~~---~~~~~~~g~L~~~l~~~g~~ 104 (105)
T 1kte_A 79 IG---GCTD---LESMHKRGELLTRLQQVGAV 104 (105)
T ss_dssp EE---SHHH---HHHHHHHTHHHHHHHHHTCB
T ss_pred Ee---ccHH---HHHHHHCCcHHHHHHHcCCC
Confidence 54 3322 22333 45788888888775
No 208
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.95 E-value=1.4e-09 Score=94.59 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=71.5
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC----------------------------ChHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER----------------------------APFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~----------------------------~~~l~~ 197 (332)
+++++||+|| ++||++|....|.|.+++.+|. ++.|+.|+.+. ...+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 4689999999 9999999999999999999885 48899888763 346888
Q ss_pred hCCcc-----cCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHH
Q psy6451 198 RLRIK-----VIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWR 239 (332)
Q Consensus 198 ~~~I~-----~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~ 239 (332)
.|++. .+|+++++ ++|+++..+.|....+...+-+.+.|+.+
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99999 99999888 69999999998654332223333444443
No 209
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.95 E-value=7e-10 Score=89.48 Aligned_cols=76 Identities=12% Similarity=0.127 Sum_probs=61.3
Q ss_pred cCcceEecCCchhhhhhhc-CCCcEEEEEccCCChhhhhhHHHHHHHHHhh------hhceeeecccCCCCcccccCCCC
Q psy6451 60 GHGEYEEIPDEKKFFDLCK-KSPNMVVHFYKDGSVNCKILDEHMKTLCKKH------LETRFIKLNVERAPFLTGQQGHG 132 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~-~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~------~~~~f~kvd~~k~pfl~~k~g~g 132 (332)
..+.+.+++ ..+|.+.+. .+.++||+||+|||++|+.+.|.|.++|..+ ..+.|+++|+...+-++.+.+..
T Consensus 13 ~~~~v~~l~-~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~ 91 (127)
T 3h79_A 13 RPSRVVELT-DETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVS 91 (127)
T ss_dssp CCCCCEECC-TTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCC
T ss_pred CCCceEECC-hhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCc
Confidence 346788885 679999885 5789999999999999999999999999875 35889999998876666666555
Q ss_pred cccc
Q psy6451 133 EYEE 136 (332)
Q Consensus 133 ~~~e 136 (332)
.+++
T Consensus 92 ~~Pt 95 (127)
T 3h79_A 92 GFPT 95 (127)
T ss_dssp SSSE
T ss_pred cCCE
Confidence 4443
No 210
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.94 E-value=1.2e-09 Score=97.02 Aligned_cols=80 Identities=14% Similarity=0.212 Sum_probs=68.9
Q ss_pred HHhcCcceEecCCchhhhhh-hcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCcc
Q psy6451 57 KALGHGEYEEIPDEKKFFDL-CKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEY 134 (332)
Q Consensus 57 ~~~g~G~~~ev~~e~~f~~~-~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~ 134 (332)
...+||.+..++ +++|.+. .++++++||+||+|||++|+.+.+.|.+++..+.+ +.|+++++...+.++.+.+...+
T Consensus 7 ~~~~~~~~~~lt-~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~ 85 (222)
T 3dxb_A 7 HHPMSDKIIHLT-DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGI 85 (222)
T ss_dssp --CCSCCCEECC-TTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSB
T ss_pred CCCCCCCceeCC-HHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcC
Confidence 346889999995 6788874 57788999999999999999999999999999987 89999999999988888887776
Q ss_pred ccc
Q psy6451 135 EEI 137 (332)
Q Consensus 135 ~ei 137 (332)
+++
T Consensus 86 Pt~ 88 (222)
T 3dxb_A 86 PTL 88 (222)
T ss_dssp SEE
T ss_pred CEE
Confidence 654
No 211
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.94 E-value=7.6e-10 Score=86.32 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=64.6
Q ss_pred CcceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCccccc
Q psy6451 61 HGEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
...+.++ +.++|.+.+ +++.+++|+||++||++|+.+.+.|.+++..+.+ +.|+.+++...+.++.+.+...++++
T Consensus 3 ~~~v~~l-~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 80 (111)
T 3gnj_A 3 AMSLEKL-DTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQI 80 (111)
T ss_dssp CCCSEEC-CHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEE
T ss_pred CCcceec-CHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEE
Confidence 3467788 578999999 7789999999999999999999999999999985 99999999988777776666555443
No 212
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.94 E-value=3e-09 Score=91.17 Aligned_cols=93 Identities=8% Similarity=-0.031 Sum_probs=70.6
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC-------Ch----HHHHh-CCcc------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER-------AP----FLTER-LRIK------------ 202 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~-------~~----~l~~~-~~I~------------ 202 (332)
++++|||.||++||++|....|.|.+++.+|.+ +.++.|.++. .+ ..+++ +++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 578999999999999999999999999999976 8888887653 21 23333 3221
Q ss_pred --------------cCcE-----EEEEeCCeeeeeEecccCcchhhHhHHHHHHHHHH
Q psy6451 203 --------------VIPT-----LTLVKDSVTKDYIVGFTELGNCADFSTEMLEWRIA 241 (332)
Q Consensus 203 --------------~~PT-----l~~~~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~ 241 (332)
++|+ +++-++|+++.++.|..+...+...+.+.|+..+.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~~~~ 174 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVII 174 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 2564 66668999999999988877776666666666554
No 213
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.94 E-value=7.9e-10 Score=86.69 Aligned_cols=76 Identities=17% Similarity=0.284 Sum_probs=62.2
Q ss_pred cCcceEecCCchhhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC-CCCcccccCCCCcccc
Q psy6451 60 GHGEYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE-RAPFLTGQQGHGEYEE 136 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~-k~pfl~~k~g~g~~~e 136 (332)
..|.+.+++ .++|.+.+. ++.+++|+||++||++|+.+.+.|.+++..++++.|+.+++. ..+.++.+.+...+++
T Consensus 3 ~~~~v~~l~-~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~~~Pt 81 (111)
T 2pu9_C 3 IVGKVTEVN-KDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPT 81 (111)
T ss_dssp CTTSEEEEC-TTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSBSSE
T ss_pred CcCccEEec-hHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCCeeeE
Confidence 368899996 478998887 478899999999999999999999999999999999999987 4555555555444443
No 214
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.93 E-value=5.5e-10 Score=89.51 Aligned_cols=77 Identities=14% Similarity=0.286 Sum_probs=65.8
Q ss_pred hcCcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccCCCCcccccCCCCccc
Q psy6451 59 LGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 59 ~g~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
.|.+.+.+|++.++|.++++++.++||.||++||+.|+.+.+.|.+++..+++ +.|+.++++..+-++...+...++
T Consensus 12 ~~~~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~P 90 (121)
T 2j23_A 12 VPRGSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMP 90 (121)
T ss_dssp CCCCCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSS
T ss_pred cCCcceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCccc
Confidence 45688999999999999998889999999999999999999999999999987 899999988766555555544443
No 215
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.93 E-value=2.6e-09 Score=90.90 Aligned_cols=41 Identities=15% Similarity=0.240 Sum_probs=35.9
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEEC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV 189 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~ 189 (332)
..+++|+.|+.+|||+|+.+.|.+.++.++++.++|.....
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~~ 61 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYREW 61 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 35788999999999999999999999999998877776663
No 216
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.93 E-value=8.5e-10 Score=84.89 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=62.0
Q ss_pred eEecCCchhhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 64 YEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+.+|++..+|.+.+. ++.+++|.||++||++|+.+.+.|.+++..++++.|+.++++..+.++...+...+++
T Consensus 1 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 75 (104)
T 2vim_A 1 MRVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAMPT 75 (104)
T ss_dssp CEECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CeecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCccccE
Confidence 467888889999997 6788999999999999999999999999999999999999987766666655544443
No 217
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.92 E-value=2.5e-09 Score=89.83 Aligned_cols=80 Identities=16% Similarity=0.057 Sum_probs=62.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC-------Ch----HHHH-hC---------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER-------AP----FLTE-RL--------------- 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~-------~~----~l~~-~~--------------- 199 (332)
++++|||.||++||++|....|.|.+++.+|.+ +.|+.|+++. .+ ..++ +|
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 578999999999999999999999999999865 8999998752 11 1222 32
Q ss_pred --------------Cc--ccCc---EEEEE-eCCeeeeeEecccCcchh
Q psy6451 200 --------------RI--KVIP---TLTLV-KDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 200 --------------~I--~~~P---Tl~~~-~~G~~v~~~~G~~~~~~~ 228 (332)
++ .++| |++++ ++|+++.++.|..+...+
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l 159 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSL 159 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGG
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHH
Confidence 34 6689 66665 799999999997665544
No 218
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.92 E-value=6.6e-10 Score=89.68 Aligned_cols=78 Identities=14% Similarity=0.189 Sum_probs=66.5
Q ss_pred hcCcceEecCCchhhhhhhcC----CCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcc
Q psy6451 59 LGHGEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEY 134 (332)
Q Consensus 59 ~g~G~~~ev~~e~~f~~~~~~----~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~ 134 (332)
..+|.+.+|++..+|.+.+.. ++++||.||++||+.|+.+.+.|.+++..++++.|+.++++..+.++.+.+...+
T Consensus 13 ~~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 13 SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CCCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCCSS
T ss_pred cCCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCCcc
Confidence 345789999999999998864 7889999999999999999999999999999999999999877666666665554
Q ss_pred cc
Q psy6451 135 EE 136 (332)
Q Consensus 135 ~e 136 (332)
++
T Consensus 93 Pt 94 (124)
T 1xfl_A 93 PT 94 (124)
T ss_dssp SE
T ss_pred CE
Confidence 43
No 219
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.92 E-value=4.4e-10 Score=87.98 Aligned_cols=76 Identities=17% Similarity=0.240 Sum_probs=63.6
Q ss_pred cCcceEecCCchhhhhhhcC----CCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccc
Q psy6451 60 GHGEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~~----~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
..|.+.+|++.++|.+.+.. +.++||.||++||++|+.+.+.|.+++..++++.|+.++++..+.++...+...++
T Consensus 2 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~P 81 (113)
T 1ti3_A 2 EEGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMP 81 (113)
T ss_dssp CCCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCSSTT
T ss_pred CCCceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCCccc
Confidence 46889999999999999864 78899999999999999999999999999999999999988765555444443333
No 220
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.91 E-value=1.3e-09 Score=91.63 Aligned_cols=76 Identities=12% Similarity=0.242 Sum_probs=66.7
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccccc
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.|.+.+++ +.+|.+.++++.++||+||+|||++|+.+.+.|.+++..+. .+.|+++|++..+.++.+.+...++++
T Consensus 46 ~~~~~~l~-~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGID-PAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECC-HHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCC-HHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 47888995 78999999778899999999999999999999999999987 699999999998888887777666554
No 221
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.90 E-value=1.2e-09 Score=86.60 Aligned_cols=73 Identities=21% Similarity=0.309 Sum_probs=63.2
Q ss_pred ceEecCCchhhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 63 EYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.+.++++..+|.+.+. ++++++|+||++||++|+.+.+.|.+++..+ .+.|+.++++..+.++.+.+...+++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt 88 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNISAMPT 88 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCCCccce
Confidence 4889988899999997 7889999999999999999999999999999 89999999987776666666555544
No 222
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.90 E-value=6.5e-09 Score=89.94 Aligned_cols=92 Identities=13% Similarity=0.203 Sum_probs=71.8
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHc--CCceEEEEECcC----------------------------ChHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKH--LETRFIKLNVER----------------------------APFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~--~~v~f~kVd~~~----------------------------~~~l~~ 197 (332)
+++++||.|| ++||++|....|.|.+++.+| .++.|+.|+.+. ...+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 5689999999 999999999999999999988 468898888763 235788
Q ss_pred hCCcc-----cCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 198 RLRIK-----VIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 198 ~~~I~-----~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
.|++. .+|+++++ ++|+++....|....+...+-+.+.|+.+.
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99999 89999999 799999999886543322233334444433
No 223
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.89 E-value=9.6e-10 Score=86.57 Aligned_cols=77 Identities=16% Similarity=0.261 Sum_probs=63.4
Q ss_pred cCcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 60 GHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+++....+.+.++|.+++++++++||.||++||++|+.+.+.|.+++..++++.|+.+++...+-++.+.+...+++
T Consensus 6 ~~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 82 (112)
T 1syr_A 6 HHHMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENITSMPT 82 (112)
T ss_dssp ---CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred cceeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCCcccE
Confidence 45666666688999999998999999999999999999999999999999999999999987766666655554443
No 224
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.89 E-value=1.3e-09 Score=84.44 Aligned_cols=75 Identities=13% Similarity=0.215 Sum_probs=63.9
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCcccc
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.+.+..+ +.++|.+++.++.+++|.||++||++|+.+.+.|.+++..+. .+.|+.+++...+-++...+...+++
T Consensus 3 ~~~v~~l-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt 78 (109)
T 3tco_A 3 EDVTLVL-TEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPT 78 (109)
T ss_dssp CCCCEEC-CTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCeEEEe-cHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCE
Confidence 5677787 468999999989999999999999999999999999999998 58999999988777766666555444
No 225
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.89 E-value=1.9e-09 Score=89.34 Aligned_cols=75 Identities=11% Similarity=0.091 Sum_probs=62.3
Q ss_pred ceEecCCchhhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccccc
Q psy6451 63 EYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.+.++.+.++|...+. .+.+|||+||+|||++|+.+.|.|.+++..+. .+.|+++|++..+.++...+...++++
T Consensus 4 ~l~~i~~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~ 81 (142)
T 1qgv_A 4 MLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTV 81 (142)
T ss_dssp SSCBCCSHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEE
T ss_pred HHhccCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEE
Confidence 4567778889987775 47889999999999999999999999999984 589999999988877777775555443
No 226
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.88 E-value=6.4e-09 Score=90.86 Aligned_cols=92 Identities=12% Similarity=0.132 Sum_probs=72.2
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC----------------------------ChHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER----------------------------APFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~----------------------------~~~l~~ 197 (332)
+++++||.|| ++||++|....|.|.+++.+|. ++.|+.|+++. ...+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 4689999999 9999999999999999999984 58999998763 245788
Q ss_pred hCCcc------cCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 198 RLRIK------VIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 198 ~~~I~------~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
.|++. .+|+++++ ++|+++....|....+...+-+.+.|+.+.
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 89999 99998888 699999998886554322233344444443
No 227
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.88 E-value=1.5e-09 Score=99.66 Aligned_cols=76 Identities=14% Similarity=0.252 Sum_probs=65.9
Q ss_pred CcceEecCCchhhhhhhcC--CCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCccccc
Q psy6451 61 HGEYEEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~--~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.+.|.+++ +.+|.+++.. +++|||+||+|||++|+.+.|.|.+++..+++ +.|+++|+...+-++...+...++++
T Consensus 6 ~~~v~~~~-~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 6 VENIVNIN-ESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CTTEEECC-TTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCccEECC-HHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 36789996 5899998865 68899999999999999999999999999987 89999999988888877777666554
No 228
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.88 E-value=1.7e-09 Score=83.52 Aligned_cols=73 Identities=11% Similarity=0.188 Sum_probs=61.8
Q ss_pred eEecCCchhhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhh-hhceeeecccCCCCcccccCCCCcccc
Q psy6451 64 YEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~-~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+.+|++..+|.+.+. ++.+++|.||++||++|+.+.+.|.+++..+ ..+.|+.++++..+-++...+...+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 77 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPT 77 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccE
Confidence 567887789999997 7889999999999999999999999999999 689999999987766666666554443
No 229
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.87 E-value=2.1e-09 Score=85.97 Aligned_cols=76 Identities=18% Similarity=0.329 Sum_probs=61.6
Q ss_pred hcCcceEecCCchhhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC-CCCcccccCCCCccc
Q psy6451 59 LGHGEYEEIPDEKKFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE-RAPFLTGQQGHGEYE 135 (332)
Q Consensus 59 ~g~G~~~ev~~e~~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~-k~pfl~~k~g~g~~~ 135 (332)
...|.+.+++ .++|.+.+. ++++++|+||++||++|+.+.+.|.+++..++++.|+.+++. ..+.++.+.+...++
T Consensus 15 ~~~~~v~~l~-~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 15 AIVGKVTEVN-KDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVP 93 (124)
T ss_dssp TTTTSEEEEC-TTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSSSS
T ss_pred hcCCceEEec-chhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCCeee
Confidence 3468899996 578888886 678899999999999999999999999999999999999987 444444444444443
No 230
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.87 E-value=1.3e-09 Score=89.09 Aligned_cols=77 Identities=8% Similarity=0.063 Sum_probs=66.9
Q ss_pred CcceEecCCchhhhhhhc----CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 61 HGEYEEIPDEKKFFDLCK----KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~----~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.+.+.++++..+|.+.+. +++++||+||++||++|+.+.+.|.+++..++++.|+.++++..+-++.+.+...+++
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt 102 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPT 102 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCEESE
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCCcccE
Confidence 467999988899998884 5789999999999999999999999999999999999999998877777777666654
Q ss_pred c
Q psy6451 137 I 137 (332)
Q Consensus 137 i 137 (332)
+
T Consensus 103 ~ 103 (139)
T 3d22_A 103 F 103 (139)
T ss_dssp E
T ss_pred E
Confidence 3
No 231
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.87 E-value=2.6e-09 Score=86.34 Aligned_cols=77 Identities=18% Similarity=0.271 Sum_probs=64.0
Q ss_pred cCcceEecCCchhhhhhhcC-CCcEEEEEccCCChhhhhhHHHHHHHHHhhh---hceeeecccCCCCcccccCCCCccc
Q psy6451 60 GHGEYEEIPDEKKFFDLCKK-SPNMVVHFYKDGSVNCKILDEHMKTLCKKHL---ETRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~~-~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~---~~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
..+.|.+++ ..+|...+.. +.++||+||+|||++|+.+.+.|.+++..+. .+.|+.+|+...+.++...+...++
T Consensus 5 ~~~~v~~l~-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 83 (133)
T 2dj3_A 5 SSGPVKVVV-GKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFP 83 (133)
T ss_dssp SSCSSEECC-TTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSS
T ss_pred CCCceEEEc-CCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCC
Confidence 357889996 5788888864 7889999999999999999999999999985 5899999999888777766665554
Q ss_pred cc
Q psy6451 136 EI 137 (332)
Q Consensus 136 ei 137 (332)
++
T Consensus 84 t~ 85 (133)
T 2dj3_A 84 TI 85 (133)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 232
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.85 E-value=1.8e-09 Score=88.28 Aligned_cols=72 Identities=17% Similarity=0.199 Sum_probs=59.5
Q ss_pred cCcceEecCCchhhhhhhcCCC--cEEEEEccCCChhhhhhHHHHHHHHHhhh--hceeeecccCCCCcccccCCCC
Q psy6451 60 GHGEYEEIPDEKKFFDLCKKSP--NMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERAPFLTGQQGHG 132 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~~~~--~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~k~pfl~~k~g~g 132 (332)
+.+.+.+++ ..+|.+.+.++. ++||+||+|||++|+.+.|.|.+++..+. .+.|+++|+...+.++.+.+..
T Consensus 5 ~~~~v~~l~-~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~ 80 (137)
T 2dj0_A 5 SSGYIKYFN-DKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVS 80 (137)
T ss_dssp CCSCCEECC-TTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCC
T ss_pred CCceEEEcc-HhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCc
Confidence 346788886 578988886655 79999999999999999999999999995 5899999998776666555543
No 233
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.85 E-value=1.2e-08 Score=90.64 Aligned_cols=92 Identities=13% Similarity=0.207 Sum_probs=72.1
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHc--CCceEEEEECcC----------------------------ChHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKH--LETRFIKLNVER----------------------------APFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~--~~v~f~kVd~~~----------------------------~~~l~~ 197 (332)
.++++||.|| ++||++|....|.|.+++.+| .++.|+.|+++. ...+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 4589999999 999999999999999999998 468899888753 235788
Q ss_pred hCCcc------cCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 198 RLRIK------VIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 198 ~~~I~------~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
.|++. .+|+++++ ++|+++....|....+...+-+.+.|+.++
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 99999 99999999 799999998886444322233334444443
No 234
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.85 E-value=1.9e-09 Score=83.32 Aligned_cols=73 Identities=15% Similarity=0.270 Sum_probs=60.4
Q ss_pred cceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccc
Q psy6451 62 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
|.+.+++ +++|.++++++++++|.||++||++|+.+.+.|.+++..+. .+.|+.+++...+.++...+...++
T Consensus 1 ~~v~~l~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 74 (109)
T 2yzu_A 1 AKPIEVT-DQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIP 74 (109)
T ss_dssp -CCEECC-TTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CcceEcc-HhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCC
Confidence 5678885 57888888888999999999999999999999999999998 5899999988766665555554443
No 235
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.85 E-value=1.3e-09 Score=89.19 Aligned_cols=78 Identities=15% Similarity=0.245 Sum_probs=64.8
Q ss_pred hcCcceEecCCchhhhhhhcCC--CcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 59 LGHGEYEEIPDEKKFFDLCKKS--PNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 59 ~g~G~~~ev~~e~~f~~~~~~~--~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.+.+.+.+|++..+|.+++... +++||.||++||++|+.+.+.|.+++..+ .+.|+++++...+.++...+...+++
T Consensus 17 ~~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt 95 (133)
T 3cxg_A 17 QGQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNIKALPT 95 (133)
T ss_dssp ETTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cCCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCCCCCCE
Confidence 3567899999889999988754 58999999999999999999999999887 78999999987776666666655554
Q ss_pred c
Q psy6451 137 I 137 (332)
Q Consensus 137 i 137 (332)
+
T Consensus 96 ~ 96 (133)
T 3cxg_A 96 F 96 (133)
T ss_dssp E
T ss_pred E
Confidence 4
No 236
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.85 E-value=1.7e-09 Score=92.84 Aligned_cols=77 Identities=5% Similarity=-0.081 Sum_probs=59.3
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC-------ChH----HHHh-----------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER-------APF----LTER----------------- 198 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~-------~~~----l~~~----------------- 198 (332)
++++|||.||++||++|+...|.|.+++++|.+ +.++.|+++. .+. .+++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 578999999999999999999999999999875 8999998753 111 1222
Q ss_pred -------CCcccCc-------E-EEEEeCCeeeeeEecccCc
Q psy6451 199 -------LRIKVIP-------T-LTLVKDSVTKDYIVGFTEL 225 (332)
Q Consensus 199 -------~~I~~~P-------T-l~~~~~G~~v~~~~G~~~~ 225 (332)
|.+..+| + +++.++|+++.++.|..+.
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~ 169 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSV 169 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCH
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCH
Confidence 2355688 4 5555899999999886543
No 237
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.85 E-value=5.6e-09 Score=90.12 Aligned_cols=79 Identities=16% Similarity=0.080 Sum_probs=60.4
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC--------ChHHH----------------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER--------APFLT---------------------- 196 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~--------~~~l~---------------------- 196 (332)
++++|||.||++||++|....|.|.++..+|.+ +.++.|+++. ...+.
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 578999999999999999999999999999875 8888887651 11111
Q ss_pred --------------HhCCcccCc---EEEEE-eCCeeeeeEecccCcch
Q psy6451 197 --------------ERLRIKVIP---TLTLV-KDSVTKDYIVGFTELGN 227 (332)
Q Consensus 197 --------------~~~~I~~~P---Tl~~~-~~G~~v~~~~G~~~~~~ 227 (332)
..+++..+| |++++ ++|+++.++.|..+...
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~ 173 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKD 173 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHH
Confidence 112445677 77666 79999999998765443
No 238
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.84 E-value=2.9e-09 Score=86.88 Aligned_cols=74 Identities=12% Similarity=0.257 Sum_probs=62.1
Q ss_pred cceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh----ceeeecccCCCCcccccCCCCcccc
Q psy6451 62 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE----TRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~----~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+.+.++ +.++|.+++.+++++||+||++||++|+.+.+.|.+++..+.+ +.|+++|+...+-++...+...+++
T Consensus 17 ~~v~~l-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 94 (140)
T 2dj1_A 17 NGVWVL-NDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPT 94 (140)
T ss_dssp TTEEEC-CTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSE
T ss_pred CCCEEc-ChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCe
Confidence 568888 5689999998889999999999999999999999999999875 8899999887766666655554444
No 239
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.84 E-value=1.4e-08 Score=88.33 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=65.8
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC----------------------------ChHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER----------------------------APFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~----------------------------~~~l~~ 197 (332)
+++++||.|| ++||++|....|.|.+++.+|. ++.|+.|+++. ...++.
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 4689999999 9999999999999999999884 48999998763 235788
Q ss_pred hCCcc------cCcEEEEE-eCCeeeeeEecccCc
Q psy6451 198 RLRIK------VIPTLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 198 ~~~I~------~~PTl~~~-~~G~~v~~~~G~~~~ 225 (332)
.|++. .+|+++++ ++|+++..+.|....
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~ 147 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPV 147 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTB
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCC
Confidence 99999 89988888 699999999886543
No 240
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.84 E-value=2.1e-09 Score=85.55 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=62.8
Q ss_pred CcceEecCCchhhhhhhc----CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 61 HGEYEEIPDEKKFFDLCK----KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~----~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.+.+..+.+.++|.+.+. +++++||+||++||++|+.+.+.|.+++..++++.|+.++++..+.++.+.+...+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 90 (122)
T 2vlu_A 11 AAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEAMPT 90 (122)
T ss_dssp -CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCCcccE
Confidence 345666667889998886 4789999999999999999999999999999999999999988776666666555544
No 241
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.83 E-value=3e-09 Score=82.04 Aligned_cols=74 Identities=16% Similarity=0.253 Sum_probs=62.3
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCcccc
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+..+.++ ++++|.+.+ ++.+++|.||+|||++|+.+.+.+.+++..+.+ +.|+.++++..+-++.+.+...+++
T Consensus 2 ~~~v~~l-~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 76 (106)
T 3die_A 2 HMAIVKV-TDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPT 76 (106)
T ss_dssp CCCCEEC-CTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSE
T ss_pred CcceEEC-CHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCE
Confidence 3457788 567899999 888999999999999999999999999999987 8999999988776666666555544
No 242
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.83 E-value=1.2e-09 Score=86.09 Aligned_cols=72 Identities=15% Similarity=0.253 Sum_probs=59.2
Q ss_pred eEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 64 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+..+.++++| +.+.+++++||.||+|||++|+.+.+.|.+++..++.+.|+.+++...+.++.+.+...+++
T Consensus 4 ~~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 75 (110)
T 2l6c_A 4 IRDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPT 75 (110)
T ss_dssp CSBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCCSSCE
T ss_pred eeecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCcccCE
Confidence 3445567888 78888889999999999999999999999999999999999999887766666665554443
No 243
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.83 E-value=4.7e-09 Score=83.28 Aligned_cols=62 Identities=15% Similarity=0.295 Sum_probs=54.1
Q ss_pred CcceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh------ceeeecccCCCC
Q psy6451 61 HGEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE------TRFIKLNVERAP 123 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~------~~f~kvd~~k~p 123 (332)
-+.+.+++ .++|.+.+ .++.+++|+||+|||++|+.+.+.|.+++..+.+ +.|+++|+...+
T Consensus 6 ~~~v~~l~-~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~ 74 (121)
T 2djj_A 6 EGPVTVVV-AKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND 74 (121)
T ss_dssp SCSSEECC-TTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC
T ss_pred CCCeEEec-ccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc
Confidence 35788885 57898886 6778999999999999999999999999999974 789999998766
No 244
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.82 E-value=3.7e-09 Score=81.62 Aligned_cols=71 Identities=18% Similarity=0.311 Sum_probs=58.4
Q ss_pred eEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCccc
Q psy6451 64 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
+.+++ +++|..+++++++++|.||+|||++|+.+.+.|.+++..+.+ +.|+.+++...+-++.+.|...++
T Consensus 2 v~~l~-~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~P 73 (105)
T 1nsw_A 2 TMTLT-DANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIP 73 (105)
T ss_dssp CEEEC-TTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred ceecc-HHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCcccc
Confidence 45674 578888888889999999999999999999999999999976 889999988766666555554443
No 245
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.82 E-value=5.7e-09 Score=92.58 Aligned_cols=81 Identities=15% Similarity=0.211 Sum_probs=59.0
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEEC---------------------------------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV--------------------------------------- 189 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~--------------------------------------- 189 (332)
.++++|+.||++|||+|+.+.|.+.+++.. ++.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~ 162 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPAS 162 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhH
Confidence 357899999999999999999999999864 455544332
Q ss_pred -----cCChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhHhHHHH
Q psy6451 190 -----ERAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCADFSTEM 235 (332)
Q Consensus 190 -----~~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~~ 235 (332)
+....+++.|+|.++||+ ++.+|. .+.|..+...+..++.+.
T Consensus 163 ~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 163 CDVDIADHYALGVQLGVSGTPAV-VLSNGT---LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CSCCHHHHHHHHHHHTCCSSSEE-ECTTSC---EEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccCEE-EEcCCe---EecCCCCHHHHHHHHHHh
Confidence 122457889999999998 567884 567877665555554443
No 246
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.81 E-value=2.9e-09 Score=81.41 Aligned_cols=72 Identities=21% Similarity=0.284 Sum_probs=59.8
Q ss_pred eEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 64 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
|.+++ .++|.+.++++++++|.||++||++|+.+.+.|.+++..++++.|+.+++...+.++...+...+++
T Consensus 1 V~~l~-~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 72 (104)
T 2e0q_A 1 VIHLD-SKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPT 72 (104)
T ss_dssp CEECC-TTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSCE
T ss_pred CeecC-HHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCccccCE
Confidence 35664 5789999988899999999999999999999999999999889999999987766665555544443
No 247
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.81 E-value=1.4e-08 Score=87.29 Aligned_cols=84 Identities=12% Similarity=-0.007 Sum_probs=62.4
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC-------C----hHHHHhC----------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER-------A----PFLTERL---------------- 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~-------~----~~l~~~~---------------- 199 (332)
++++|||.||++||++|....|.|.+++.+|.+ +.++.|+++. . ...++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 127 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 127 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCChh
Confidence 568999999999999999999999999999864 8999998752 1 1122222
Q ss_pred ---------------C-----cccCcEEEEE-eCCeeeeeEecccCcchhhHhH
Q psy6451 200 ---------------R-----IKVIPTLTLV-KDSVTKDYIVGFTELGNCADFS 232 (332)
Q Consensus 200 ---------------~-----I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~ 232 (332)
+ |..+|+++++ ++|+++.++.|..+...+...+
T Consensus 128 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 181 (185)
T 2gs3_A 128 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 181 (185)
T ss_dssp BCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGH
T ss_pred hhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHH
Confidence 2 2225787777 7999999999976655554443
No 248
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.81 E-value=1.5e-09 Score=86.71 Aligned_cols=85 Identities=14% Similarity=0.236 Sum_probs=60.9
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCCh-------HHHHhCCcccCcEEEEEeCCeeeeeEecccC
Q psy6451 152 NMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAP-------FLTERLRIKVIPTLTLVKDSVTKDYIVGFTE 224 (332)
Q Consensus 152 ~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~-------~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~ 224 (332)
..|+.|++|||++|+.+.+.|+.+...++. |..+|++..+ .+.+.+++.++|+++ .+|+.+. |+.+
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~--i~g~~ig---g~~~ 91 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKRGA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIF--FGKTSIG---GYSD 91 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCTTS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE--ETTEEEE---SHHH
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCcCc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEE--ECCEEEe---CcHH
Confidence 346779999999999999998865433222 8889988875 688899999999974 3887654 3221
Q ss_pred cchhhHh-HHHHHHHHHHHcCCc
Q psy6451 225 LGNCADF-STEMLEWRIAQAGVI 246 (332)
Q Consensus 225 ~~~~~~f-~~~~Le~~L~~~g~l 246 (332)
+..+ ....|+.+|...|.+
T Consensus 92 ---~~~~~~~~~L~~~L~~~g~~ 111 (114)
T 2hze_A 92 ---LLEIDNMDALGDILSSIGVL 111 (114)
T ss_dssp ---HHHHHHTTCHHHHHHHTTCB
T ss_pred ---HHHHHHCChHHHHHHHcCCe
Confidence 1222 234688888888776
No 249
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.81 E-value=3.4e-09 Score=85.31 Aligned_cols=75 Identities=17% Similarity=0.241 Sum_probs=59.8
Q ss_pred CcceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCcccc
Q psy6451 61 HGEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.+.+.+++ .++|.+.+ +++.++||+||+|||++|+.+.+.|.+++..+.+ +.|+.+++...+.++...+...+++
T Consensus 16 ~~~v~~l~-~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (130)
T 2dml_A 16 SDDVIELT-PSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPT 92 (130)
T ss_dssp TSSSEECC-TTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CCCcEECC-HHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCE
Confidence 35788885 57888855 6678899999999999999999999999999987 8899999887665555555444433
No 250
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.80 E-value=6.5e-09 Score=89.15 Aligned_cols=78 Identities=13% Similarity=0.030 Sum_probs=59.8
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC-------ChH----HHHhC----------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER-------APF----LTERL---------------- 199 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~-------~~~----l~~~~---------------- 199 (332)
++++|||.||++||++|....|.|.+++.+|.+ +.|+.|+++. .+. .++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 578999999999999999999999999999865 8999998752 111 11111
Q ss_pred ---------------C-----cccCcEEEEE-eCCeeeeeEecccCcc
Q psy6451 200 ---------------R-----IKVIPTLTLV-KDSVTKDYIVGFTELG 226 (332)
Q Consensus 200 ---------------~-----I~~~PTl~~~-~~G~~v~~~~G~~~~~ 226 (332)
+ |..+||++++ ++|+++.++.|..+..
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~ 173 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPL 173 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTH
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHH
Confidence 3 3346987777 7999999999865543
No 251
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.80 E-value=7e-09 Score=81.62 Aligned_cols=72 Identities=11% Similarity=0.178 Sum_probs=60.7
Q ss_pred eEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccccc
Q psy6451 64 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 64 ~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
+.+++ +++|.+.+ ++.+++|.||++||++|+.+.+.|.+++..+. .+.|+.++++..+-++.+.+...++++
T Consensus 3 v~~l~-~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 75 (112)
T 2voc_A 3 IVKAT-DQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTL 75 (112)
T ss_dssp CEECC-TTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEE
T ss_pred eEEec-HHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEE
Confidence 56674 57898888 88899999999999999999999999999986 589999999988777777766555443
No 252
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.80 E-value=2e-08 Score=88.68 Aligned_cols=42 Identities=5% Similarity=-0.054 Sum_probs=38.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 190 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~ 190 (332)
++++|||.|||+||++|+...|.|.+|+++|.+ +.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 568999999999999999999999999999864 889999875
No 253
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.80 E-value=3.9e-09 Score=84.24 Aligned_cols=74 Identities=12% Similarity=0.254 Sum_probs=60.4
Q ss_pred ceEecC-Cchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 63 EYEEIP-DEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 63 ~~~ev~-~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.+.+++ +..+|.+.+ +.+.++||.||++||+.|+.+.+.|.+++..+..+.|+.+++...+.++...+...+++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~~~Pt 79 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSSIPA 79 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCCCCCE
Confidence 466776 678888544 56789999999999999999999999999999889999999987766666665554443
No 254
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.79 E-value=3.8e-09 Score=83.09 Aligned_cols=72 Identities=21% Similarity=0.272 Sum_probs=59.9
Q ss_pred cceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh----hceeeecccCCCCcccccCCCCcc
Q psy6451 62 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL----ETRFIKLNVERAPFLTGQQGHGEY 134 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~----~~~f~kvd~~k~pfl~~k~g~g~~ 134 (332)
+.+.+++ +++|.+++.++++++|+||++||++|+.+.+.|.+++..+. .+.|+++|+...+-++...+...+
T Consensus 7 ~~v~~l~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 82 (120)
T 1mek_A 7 DHVLVLR-KSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGY 82 (120)
T ss_dssp TTEEECC-TTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSS
T ss_pred CCcEEec-hhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcc
Confidence 5688885 68899999888999999999999999999999999999985 578999999877666555554433
No 255
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.79 E-value=2.6e-08 Score=88.19 Aligned_cols=92 Identities=10% Similarity=0.184 Sum_probs=70.7
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHc--CCceEEEEECcC----------------------------ChHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKH--LETRFIKLNVER----------------------------APFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~--~~v~f~kVd~~~----------------------------~~~l~~ 197 (332)
+++++||.|| ++||++|....|.|.+++++| .++.|+.|+++. ...+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 5689999999 999999999999999999998 458888888653 245788
Q ss_pred hCCcc-----cCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 198 RLRIK-----VIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 198 ~~~I~-----~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
.|++. .+|+++++ ++|+++....|....+.-.+-+.+.|+.+.
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 89988888 699999998886543321233334444443
No 256
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.79 E-value=1.8e-09 Score=86.69 Aligned_cols=78 Identities=13% Similarity=0.194 Sum_probs=67.5
Q ss_pred cCcceEecCCchhhhhhhcC----CCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccc
Q psy6451 60 GHGEYEEIPDEKKFFDLCKK----SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~~----~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
..|.+.++++..+|.+.+.. +.++||+||++||++|+.+.+.|.+++..++++.|+.++++..+.++.+.+...++
T Consensus 12 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~P 91 (130)
T 1wmj_A 12 EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMP 91 (130)
T ss_dssp SCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCCSSC
T ss_pred cCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCCccc
Confidence 35789999888999988864 78899999999999999999999999999999999999999887777766666555
Q ss_pred cc
Q psy6451 136 EI 137 (332)
Q Consensus 136 ei 137 (332)
++
T Consensus 92 t~ 93 (130)
T 1wmj_A 92 TF 93 (130)
T ss_dssp CC
T ss_pred eE
Confidence 44
No 257
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.79 E-value=3.7e-09 Score=84.10 Aligned_cols=72 Identities=17% Similarity=0.264 Sum_probs=58.3
Q ss_pred ceEecCCchhhhh-hhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccc
Q psy6451 63 EYEEIPDEKKFFD-LCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 63 ~~~ev~~e~~f~~-~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
.+.+++ .++|.+ +..++.++||+||+|||++|+.+.+.|.+++..+. .+.|+.+++...+-++...+...++
T Consensus 4 ~v~~l~-~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 77 (122)
T 3aps_A 4 ASIDLT-PQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYP 77 (122)
T ss_dssp CSEECC-HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred chhcCC-HHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccc
Confidence 467785 578854 55777899999999999999999999999999998 6899999998776666555544443
No 258
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.78 E-value=9.8e-09 Score=79.61 Aligned_cols=75 Identities=15% Similarity=0.269 Sum_probs=61.0
Q ss_pred cceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccccc
Q psy6451 62 GEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
+.+.+++ .++|.+.+ +++++++|.||++||++|+.+.+.|.+++..+. .+.|+.+++...+.++.+.+...++++
T Consensus 2 ~~v~~l~-~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (108)
T 2trx_A 2 DKIIHLT-DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTL 78 (108)
T ss_dssp TTEEECC-TTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEE
T ss_pred Ccceecc-hhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEE
Confidence 4577885 57887555 667889999999999999999999999999987 589999999888777776666555443
No 259
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.78 E-value=4.1e-09 Score=86.64 Aligned_cols=76 Identities=16% Similarity=0.271 Sum_probs=64.0
Q ss_pred CcceEecCCchhhh-hhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCccccc
Q psy6451 61 HGEYEEIPDEKKFF-DLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 61 ~G~~~ev~~e~~f~-~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.+.+.+++ +++|. .+..++.++||.||+|||++|+.+.+.|.+++..+.+ +.|+.+++...+.++...+...++++
T Consensus 5 ~~~v~~l~-~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (140)
T 3hz4_A 5 GSSIIEFE-DMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTF 82 (140)
T ss_dssp TTTEEEEC-HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEE
T ss_pred CcceEEcc-hHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEE
Confidence 35688885 67888 6667788999999999999999999999999999987 99999999988777777666665544
No 260
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=5.4e-09 Score=84.20 Aligned_cols=76 Identities=16% Similarity=0.271 Sum_probs=62.2
Q ss_pred CcceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-----hceeeecccCCCCcccccCCCCcc
Q psy6451 61 HGEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-----ETRFIKLNVERAPFLTGQQGHGEY 134 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-----~~~f~kvd~~k~pfl~~k~g~g~~ 134 (332)
.+.+.+++ ..+|.+.+ +.+.++||+||++||++|+.+.+.|.+++..+. .+.|+.+|+...+.++.+.+...+
T Consensus 6 ~~~v~~l~-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 6 SGDVIELT-DDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp CCSCEECC-TTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCcCEEcC-HhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee
Confidence 35688886 57888876 567889999999999999999999999999985 588999999887766666665555
Q ss_pred ccc
Q psy6451 135 EEI 137 (332)
Q Consensus 135 ~ei 137 (332)
+++
T Consensus 85 Pt~ 87 (133)
T 1x5d_A 85 PTI 87 (133)
T ss_dssp SEE
T ss_pred CeE
Confidence 444
No 261
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.77 E-value=4.4e-08 Score=82.34 Aligned_cols=75 Identities=5% Similarity=0.015 Sum_probs=63.8
Q ss_pred cCCcEEEEEecCC-ChhhHHHHHHHHHHHHHcCCceEEEEECcC-----------------------ChHHHHhCCccc-
Q psy6451 149 KSPNMVVHFYKDG-SVNCKILDEHMKTLCKKHLETRFIKLNVER-----------------------APFLTERLRIKV- 203 (332)
Q Consensus 149 ~~~~VvV~Fya~w-c~~Ck~l~~~l~~La~~~~~v~f~kVd~~~-----------------------~~~l~~~~~I~~- 203 (332)
+++++||.||++| |++|....|.|.+++.+|.++.|+.|+.+. ...+++.|++..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~ 122 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIK 122 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBT
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccc
Confidence 4689999999999 999999999999999999779999888763 235778899987
Q ss_pred -----CcEEEEE-eCCeeeeeEeccc
Q psy6451 204 -----IPTLTLV-KDSVTKDYIVGFT 223 (332)
Q Consensus 204 -----~PTl~~~-~~G~~v~~~~G~~ 223 (332)
.|+++++ ++|+++.++.|..
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~g~~ 148 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEYVSE 148 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEECSB
T ss_pred cCCceeeEEEEEcCCCcEEEEEecCC
Confidence 4988877 6999999998753
No 262
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.77 E-value=7e-09 Score=81.11 Aligned_cols=74 Identities=16% Similarity=0.314 Sum_probs=58.9
Q ss_pred cceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCcccc
Q psy6451 62 GEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
|.|.+++. .+|.+.+ +++++++|.||++||++|+.+.+.|.+++..+. .+.|+.+++...+-++.+.+...+++
T Consensus 5 ~~v~~l~~-~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 80 (112)
T 1t00_A 5 GTLKHVTD-DSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPT 80 (112)
T ss_dssp CCCEEECT-TTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ceEEecch-hhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccE
Confidence 56788864 6676554 567889999999999999999999999999985 58899999887766666665554443
No 263
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.77 E-value=2.8e-08 Score=84.78 Aligned_cols=72 Identities=4% Similarity=0.092 Sum_probs=61.6
Q ss_pred cCCcEEEEEecCC-ChhhHHHHHHHHHHHHHcCCceEEEEECcC----------------------ChHHHHhCCcccC-
Q psy6451 149 KSPNMVVHFYKDG-SVNCKILDEHMKTLCKKHLETRFIKLNVER----------------------APFLTERLRIKVI- 204 (332)
Q Consensus 149 ~~~~VvV~Fya~w-c~~Ck~l~~~l~~La~~~~~v~f~kVd~~~----------------------~~~l~~~~~I~~~- 204 (332)
+++++||.||++| |++|....|.|.++..+ .++.|+.|+.+. ...+++.|++...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 4689999999999 99999999999999988 779999998862 2357889999887
Q ss_pred --------cEEEEE-eCCeeeeeEec
Q psy6451 205 --------PTLTLV-KDSVTKDYIVG 221 (332)
Q Consensus 205 --------PTl~~~-~~G~~v~~~~G 221 (332)
|+++++ ++|+++..+.|
T Consensus 122 ~~~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 122 GPMAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp STTTTSBCSEEEEECTTSBEEEEEEC
T ss_pred cccCCcccceEEEECCCCeEEEEEEC
Confidence 777766 69999999975
No 264
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.76 E-value=6.9e-09 Score=83.23 Aligned_cols=74 Identities=18% Similarity=0.298 Sum_probs=59.6
Q ss_pred cCcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh--hceeeecccCCCCcccccCCCCcccc
Q psy6451 60 GHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
..+.+.+++ +.+|.+++++. +||+||++||++|+.+.+.|.+++..+. .+.|+.+++...+-++.+.+...+++
T Consensus 5 ~~~~v~~l~-~~~f~~~~~~~--vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 80 (126)
T 1x5e_A 5 SSGNVRVIT-DENWRELLEGD--WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPT 80 (126)
T ss_dssp CCCSEEECC-TTTHHHHTSSE--EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCCccEEec-HHHHHHHhCCC--EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCE
Confidence 357789995 67898887653 9999999999999999999999999987 48899999887766666555544443
No 265
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.76 E-value=4.6e-09 Score=81.67 Aligned_cols=73 Identities=16% Similarity=0.236 Sum_probs=60.9
Q ss_pred cceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhh----hhceeeecccCCCCcccccCCCCcccc
Q psy6451 62 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKH----LETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~----~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+.+.++ ++.+|.+.+. +.++||.||++||++|+.+.+.|.+++..+ ..+.|+.+|+...+-++.+.+...+++
T Consensus 5 ~~v~~l-~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 81 (111)
T 3uvt_A 5 STVLAL-TENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPT 81 (111)
T ss_dssp CCSEEC-CTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CcceEc-ChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccE
Confidence 467888 4689999998 678999999999999999999999999987 478999999988776666666555444
No 266
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.75 E-value=6.9e-09 Score=84.76 Aligned_cols=77 Identities=21% Similarity=0.327 Sum_probs=62.8
Q ss_pred cCcceEecCCchhhhhhhcC------------CCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCccc
Q psy6451 60 GHGEYEEIPDEKKFFDLCKK------------SPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLT 126 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~~------------~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~ 126 (332)
..+.+.+++ ..+|...+.. +.++||+||++||++|+.+.+.|.+++..+. .+.|+.+++...+-++
T Consensus 20 ~~~~v~~l~-~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 98 (141)
T 3hxs_A 20 PQSGTIHLT-RAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELA 98 (141)
T ss_dssp ---CCEECC-HHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHH
T ss_pred CCCCccccc-HHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHH
Confidence 356788884 6788888864 6889999999999999999999999999998 5899999999887777
Q ss_pred ccCCCCccccc
Q psy6451 127 GQQGHGEYEEI 137 (332)
Q Consensus 127 ~k~g~g~~~ei 137 (332)
...+...++++
T Consensus 99 ~~~~v~~~Pt~ 109 (141)
T 3hxs_A 99 RDFGIQSIPTI 109 (141)
T ss_dssp HHTTCCSSSEE
T ss_pred HHcCCCCcCEE
Confidence 77776665544
No 267
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.75 E-value=8.2e-09 Score=85.34 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=64.0
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhh-hhceeeecccCCCCcccccCCCCccccc
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~-~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.|.+..++ .++|.+.+.+++++||+||++||++|+.+.+.|.+++..+ ..+.|+.++++..+.++...+...++++
T Consensus 37 ~~~v~~l~-~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINAT-AETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECC-TTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecC-HHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 36788885 5899999988899999999999999999999999999998 4689999999887777766665555443
No 268
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.75 E-value=4.2e-09 Score=95.68 Aligned_cols=57 Identities=21% Similarity=0.346 Sum_probs=46.9
Q ss_pred cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccc
Q psy6451 78 KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 78 ~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
.++.+||||||+|||++|+.|.|+|..||..|+++.|+++++.. +-++...+...++
T Consensus 131 ~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~-~~l~~~~~I~~~P 187 (245)
T 1a0r_P 131 QKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKIKASN-TGAGDRFSSDVLP 187 (245)
T ss_dssp CTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHH-HCCTTSSCTTTCS
T ss_pred cCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEEeCCc-HHHHHHCCCCCCC
Confidence 35789999999999999999999999999999999999999876 3344444444433
No 269
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.75 E-value=1.2e-08 Score=78.69 Aligned_cols=73 Identities=15% Similarity=0.225 Sum_probs=59.5
Q ss_pred ceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCcccc
Q psy6451 63 EYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.+.+++ .++|.+.+ .++.++||+||+|||++|+.+.+.|.+++..+. .+.|+.+++...+.++.+.+...+++
T Consensus 3 ~v~~l~-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 77 (107)
T 2i4a_A 3 HTLAVS-DSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPT 77 (107)
T ss_dssp CEEECC-TTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSE
T ss_pred ceeecc-hhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCE
Confidence 577785 57787665 667889999999999999999999999999997 58999999988776666666554443
No 270
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.74 E-value=4.2e-08 Score=87.27 Aligned_cols=78 Identities=10% Similarity=0.203 Sum_probs=66.6
Q ss_pred cCCcEEEEEec-CCChhhHHHHHHHHHHHHHcC--CceEEEEECcC----------------------------ChHHHH
Q psy6451 149 KSPNMVVHFYK-DGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER----------------------------APFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fya-~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~----------------------------~~~l~~ 197 (332)
++++|||.||+ +||++|....|.|.+++.+|. ++.|+.|+++. ...++.
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 56899999997 999999999999999999985 48888888763 225778
Q ss_pred hCCcc------cCcEEEEE-eCCeeeeeEecccCcc
Q psy6451 198 RLRIK------VIPTLTLV-KDSVTKDYIVGFTELG 226 (332)
Q Consensus 198 ~~~I~------~~PTl~~~-~~G~~v~~~~G~~~~~ 226 (332)
.|++. .+|+++++ ++|+++..+.|....+
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~ 183 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVG 183 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBC
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCC
Confidence 89999 89999988 6999999998876654
No 271
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.73 E-value=1.9e-08 Score=81.47 Aligned_cols=75 Identities=13% Similarity=0.220 Sum_probs=62.5
Q ss_pred cceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccccc
Q psy6451 62 GEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
+.|.+++ .++|.+.+ .+++++||.||++||++|+.+.+.|.+++..+. .+.|+.++++..+-++...+...++++
T Consensus 22 ~~v~~l~-~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 98 (128)
T 2o8v_B 22 DKIIHLT-DDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTL 98 (128)
T ss_dssp CCSEEEC-TTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEE
T ss_pred cccEecC-hhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEE
Confidence 4578885 57887554 677889999999999999999999999999997 589999999988877777776665544
No 272
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.72 E-value=3.1e-09 Score=86.90 Aligned_cols=55 Identities=13% Similarity=0.157 Sum_probs=50.6
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeeccc
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV 119 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~ 119 (332)
.|.+.++ +..+|.+.+++ ++||+||++||++|+.+.|.|.+++..+. +.|+.+++
T Consensus 15 ~~~v~~l-~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~ 69 (135)
T 3emx_A 15 DGRLIYI-TPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIW 69 (135)
T ss_dssp TTEEEEC-CHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEE
T ss_pred cCceeec-CHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEEC
Confidence 4788899 56899999987 99999999999999999999999999998 89999988
No 273
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.72 E-value=1.3e-08 Score=81.08 Aligned_cols=77 Identities=18% Similarity=0.213 Sum_probs=61.9
Q ss_pred cCcceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCcccc
Q psy6451 60 GHGEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
++|....+.++++|.+.+ +++.++||.||++||++|+.+.+.|.+++..+. .+.|+.+++...+-++.+.+...+++
T Consensus 10 ~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 88 (119)
T 1w4v_A 10 HGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPT 88 (119)
T ss_dssp CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred CCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccE
Confidence 467766666789999866 566789999999999999999999999999985 58899999887666665555554443
No 274
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.72 E-value=5e-08 Score=85.17 Aligned_cols=91 Identities=5% Similarity=-0.006 Sum_probs=64.1
Q ss_pred cCCcEEEEEecCCChh-hHHHHHHHHHHHHHcC-----CceEEEEECcC---C-------------------------hH
Q psy6451 149 KSPNMVVHFYKDGSVN-CKILDEHMKTLCKKHL-----ETRFIKLNVER---A-------------------------PF 194 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~-Ck~l~~~l~~La~~~~-----~v~f~kVd~~~---~-------------------------~~ 194 (332)
+++++||.||++||++ |....|.|.++..++. ++.++.|+++. . ..
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4789999999999997 9999999999766553 58888888763 1 24
Q ss_pred HHHhCCcc-cCc---------------E-EEEEeCCeeeeeEecccCcchhhHhHHHHHHHHHHHc
Q psy6451 195 LTERLRIK-VIP---------------T-LTLVKDSVTKDYIVGFTELGNCADFSTEMLEWRIAQA 243 (332)
Q Consensus 195 l~~~~~I~-~~P---------------T-l~~~~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L~~~ 243 (332)
++..|+|. ..| + +++-++|+++..+.|..+... +.+.|...|...
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~----~~~~i~~~l~~l 181 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKT----GVDKIVEHVKSY 181 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTH----HHHHHHHHHHHC
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHH----HHHHHHHHHHHh
Confidence 67788887 454 4 444579999999988654433 345555556543
No 275
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.71 E-value=1.4e-08 Score=82.84 Aligned_cols=77 Identities=22% Similarity=0.358 Sum_probs=63.1
Q ss_pred cCcceEecCCchhhhhhhc------------CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCccc
Q psy6451 60 GHGEYEEIPDEKKFFDLCK------------KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLT 126 (332)
Q Consensus 60 g~G~~~ev~~e~~f~~~~~------------~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~ 126 (332)
..+.+.+++ ..+|.+.+. ++.++||.||++||++|+.+.+.|.+++..+. .+.|+.+++...+.++
T Consensus 7 ~~~~v~~l~-~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~ 85 (136)
T 2l5l_A 7 GNGKVIHLT-KAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELA 85 (136)
T ss_dssp CTTSEEEEC-HHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHH
T ss_pred cCCceEEec-chHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHH
Confidence 356788885 588988885 35789999999999999999999999999997 4899999998877666
Q ss_pred ccCCCCccccc
Q psy6451 127 GQQGHGEYEEI 137 (332)
Q Consensus 127 ~k~g~g~~~ei 137 (332)
...+...++++
T Consensus 86 ~~~~v~~~Pt~ 96 (136)
T 2l5l_A 86 GAFGIRSIPSI 96 (136)
T ss_dssp HHTTCCSSCEE
T ss_pred HHcCCCCCCEE
Confidence 66666555543
No 276
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.71 E-value=1.5e-08 Score=80.24 Aligned_cols=74 Identities=14% Similarity=0.210 Sum_probs=58.6
Q ss_pred CcceEecCCchhhhhh-hcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccc
Q psy6451 61 HGEYEEIPDEKKFFDL-CKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~-~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
.+.+.+++. .+|... .+.+.++||+||++||++|+.+.+.|.+++..+. .+.|+.+++...+.++.+.+...++
T Consensus 11 ~~~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~P 86 (121)
T 2i1u_A 11 KSATIKVTD-ASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIP 86 (121)
T ss_dssp -CCSEECCT-TTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred cccceecCH-HHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCC
Confidence 567888864 677654 4667899999999999999999999999999986 5899999988776666555544443
No 277
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.70 E-value=1.2e-07 Score=79.14 Aligned_cols=77 Identities=13% Similarity=0.087 Sum_probs=61.1
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCC-ceEEEEECcC---------------------ChHHHHhCCcccCc
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVER---------------------APFLTERLRIKVIP 205 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~~---------------------~~~l~~~~~I~~~P 205 (332)
++++|||+|| ++||++|....|.|.++..+|.. -.++.|..+. ...+++.|++...|
T Consensus 34 k~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 34 NNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp HCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred CCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 3457899987 99999999999999999988763 2677776542 23577889999999
Q ss_pred -------EEEEEeCCeeeeeEecccCcc
Q psy6451 206 -------TLTLVKDSVTKDYIVGFTELG 226 (332)
Q Consensus 206 -------Tl~~~~~G~~v~~~~G~~~~~ 226 (332)
|+++ ++|+++..+.|.....
T Consensus 114 ~~g~~~~~~li-~~G~i~~~~~g~~~~~ 140 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKFKRVKISPEV 140 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEEEEESCCHHH
T ss_pred cCCccceEEEE-cCCEEEEEEccCCccc
Confidence 6777 9999999999875443
No 278
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.70 E-value=1.7e-08 Score=78.88 Aligned_cols=74 Identities=12% Similarity=0.187 Sum_probs=60.5
Q ss_pred cceEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCcccc
Q psy6451 62 GEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+.+.+++ .++|...+ .++.++||+||++||++|+.+.+.|.+++..+. .+.|+.+++...+.++.+.+...+++
T Consensus 7 ~~v~~l~-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (115)
T 1thx_A 7 KGVITIT-DAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPA 82 (115)
T ss_dssp CSEEECC-GGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSE
T ss_pred CceEEee-ccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeE
Confidence 4588884 67888765 667889999999999999999999999999997 48999999987776666666554443
No 279
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.69 E-value=5.8e-09 Score=92.93 Aligned_cols=58 Identities=19% Similarity=0.332 Sum_probs=48.7
Q ss_pred cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCcccc
Q psy6451 78 KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 78 ~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.++.+||||||+|||++|+.|.++|..||..|+.+.|+++++. .+.++...+...+++
T Consensus 118 ~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~-~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 118 QKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRAS-NTGAGDRFSSDVLPT 175 (217)
T ss_dssp CTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEEEHH-HHTCSTTSCGGGCSE
T ss_pred CCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEEECC-cHHHHHHCCCCCCCE
Confidence 3577999999999999999999999999999999999999998 555665555544443
No 280
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.69 E-value=8.2e-09 Score=85.42 Aligned_cols=75 Identities=15% Similarity=0.075 Sum_probs=63.0
Q ss_pred CcceEecCCchhhhhhhcCCC-cEEEEEccCCC--hhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCcccc
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSP-NMVVHFYKDGS--VNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~-~vvVhFy~p~~--~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
||.. +|+ +.+|.+.+.++. +|||.||++|| +.|+.|.|.|.+||..|. .++|+++|+++.+-+..+.|..++++
T Consensus 15 ~g~~-~vt-~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPT 92 (137)
T 2qsi_A 15 NAPT-LVD-EATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPS 92 (137)
T ss_dssp --CE-EEC-TTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSE
T ss_pred cCCc-ccC-HhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCE
Confidence 5544 775 589999997776 99999999999 999999999999999996 58999999999888888877766655
Q ss_pred c
Q psy6451 137 I 137 (332)
Q Consensus 137 i 137 (332)
+
T Consensus 93 l 93 (137)
T 2qsi_A 93 L 93 (137)
T ss_dssp E
T ss_pred E
Confidence 4
No 281
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.68 E-value=1.8e-08 Score=89.08 Aligned_cols=72 Identities=14% Similarity=0.210 Sum_probs=53.5
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc--------------------------------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE-------------------------------------- 190 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~-------------------------------------- 190 (332)
.++++|+.|+.+|||+|+.+.|.++++... ++.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~ 162 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVK 162 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHH
Confidence 357899999999999999999999998763 4444433221
Q ss_pred ------CChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcc
Q psy6451 191 ------RAPFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELG 226 (332)
Q Consensus 191 ------~~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~ 226 (332)
....+++.++|+++||+++ .||+ .+.|..+..
T Consensus 163 ~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~ 200 (211)
T 1t3b_A 163 TPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPA 200 (211)
T ss_dssp CSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHH
T ss_pred HHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHH
Confidence 2245678999999999988 7886 456765543
No 282
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=3.4e-08 Score=80.69 Aligned_cols=93 Identities=10% Similarity=0.110 Sum_probs=64.1
Q ss_pred hhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC---hH----HHHhCCcccCcEEEEEeC
Q psy6451 140 EKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA---PF----LTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 140 e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~---~~----l~~~~~I~~~PTl~~~~~ 212 (332)
.+.+.+.+... .|+| |+++||++|+.+.+.|..+. +.|..+|++.. +. +++.+++..+||++ .+
T Consensus 17 ~~~~~~~i~~~-~vvv-f~~~~Cp~C~~~~~~L~~~~-----i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i~ 87 (130)
T 2cq9_A 17 VNQIQETISDN-CVVI-FSKTSCSYCTMAKKLFHDMN-----VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--VN 87 (130)
T ss_dssp HHHHHHHHHHS-SEEE-EECSSCSHHHHHHHHHHHHT-----CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--ET
T ss_pred HHHHHHHHcCC-cEEE-EEcCCChHHHHHHHHHHHcC-----CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--EC
Confidence 34555555555 4444 99999999999999998864 45667787765 43 77889999999984 48
Q ss_pred CeeeeeEecccCcchhhHh-HHHHHHHHHHHcCCcc
Q psy6451 213 SVTKDYIVGFTELGNCADF-STEMLEWRIAQAGVID 247 (332)
Q Consensus 213 G~~v~~~~G~~~~~~~~~f-~~~~Le~~L~~~g~l~ 247 (332)
|+.+.. ..+. ..+ ....|+.+|...|+..
T Consensus 88 G~~igg---~~~l---~~~~~~~~L~~~L~~~g~~~ 117 (130)
T 2cq9_A 88 GTFIGG---ATDT---HRLHKEGKLLPLVHQCYLKK 117 (130)
T ss_dssp TEEEEE---HHHH---HHHHHHTSSHHHHHHHSSSC
T ss_pred CEEEcC---hHHH---HHHHHcCcHHHHHHHcCcHH
Confidence 876543 2211 122 2336788888887763
No 283
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.67 E-value=6.3e-08 Score=70.23 Aligned_cols=59 Identities=14% Similarity=0.271 Sum_probs=48.9
Q ss_pred EEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHH---hCCcccCcEEEEEeCCeeeeeEecc
Q psy6451 154 VVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTE---RLRIKVIPTLTLVKDSVTKDYIVGF 222 (332)
Q Consensus 154 vV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~---~~~I~~~PTl~~~~~G~~v~~~~G~ 222 (332)
++.|+++||++|+.+.+.|+++ ++.|..+|++..+.+.+ .+++.++||+++ +|+. +.|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~~g~ 64 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---WSGF 64 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---EESC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---EcCC
Confidence 6779999999999999988865 57888999998877666 899999999874 8864 4454
No 284
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.66 E-value=8.4e-08 Score=80.19 Aligned_cols=76 Identities=9% Similarity=0.090 Sum_probs=63.0
Q ss_pred cCCcEEEEEec-CCChhhHHHHHHHHHHHHHcC--CceEEEEECcC---------------------ChHHHHhCCccc-
Q psy6451 149 KSPNMVVHFYK-DGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER---------------------APFLTERLRIKV- 203 (332)
Q Consensus 149 ~~~~VvV~Fya-~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~---------------------~~~l~~~~~I~~- 203 (332)
.++++||.||+ +||++|....|.|.++..+|. ++.++.|..+. ...++..|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 46799999998 999999999999999999885 48888888762 235677899987
Q ss_pred -----------CcEEEEE-eCCeeeeeEecccC
Q psy6451 204 -----------IPTLTLV-KDSVTKDYIVGFTE 224 (332)
Q Consensus 204 -----------~PTl~~~-~~G~~v~~~~G~~~ 224 (332)
+|+++++ ++|+++..+.|...
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~ 146 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKV 146 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCS
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCc
Confidence 9999999 59999988866544
No 285
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.66 E-value=7.1e-08 Score=71.31 Aligned_cols=55 Identities=18% Similarity=0.418 Sum_probs=45.9
Q ss_pred EEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHH---hCCcccCcEEEEEeCCee
Q psy6451 154 VVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTE---RLRIKVIPTLTLVKDSVT 215 (332)
Q Consensus 154 vV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~---~~~I~~~PTl~~~~~G~~ 215 (332)
|+.|+++||++|+.+.+.|+++ ++.|..+|++..+.+.+ ++++.++||+ +.+|+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~ 60 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS 60 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE
Confidence 6779999999999999988863 57888999998877654 4899999998 458864
No 286
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.65 E-value=2.8e-08 Score=76.38 Aligned_cols=72 Identities=17% Similarity=0.288 Sum_probs=57.1
Q ss_pred eEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCcccc
Q psy6451 64 YEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 64 ~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
|.+++ .++|.+.+ .++.+++|.||++||++|+.+.+.+.+++..+.+ +.|+.+++...+-++...+...+++
T Consensus 2 v~~~~-~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 75 (105)
T 1fb6_A 2 VQDVN-DSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 75 (105)
T ss_dssp CEECC-TTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ceech-hhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccE
Confidence 45664 57888866 4567899999999999999999999999999975 8899999887766666555544443
No 287
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.65 E-value=7.2e-09 Score=86.08 Aligned_cols=74 Identities=12% Similarity=0.150 Sum_probs=63.9
Q ss_pred ceEecCCchhhhhhhcCCCcEEEEEccCC--ChhhhhhHHHHHHHHHhhhh--ceeeecccCCCCcccccCCCCccccc
Q psy6451 63 EYEEIPDEKKFFDLCKKSPNMVVHFYKDG--SVNCKILDEHMKTLCKKHLE--TRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~~~~~vvVhFy~p~--~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.+.+++ +.+|.+.+..+.+|||.|+++| |+.|+.|.|.|.+||..|.+ ++|+++|+++.+-+..+.|..+++++
T Consensus 18 g~~~~t-~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTl 95 (140)
T 2qgv_A 18 GWTPVS-ESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPAT 95 (140)
T ss_dssp TCEECC-HHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEE
T ss_pred CCccCC-HHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEE
Confidence 455774 6899999987778999999999 99999999999999999975 79999999998888888877666554
No 288
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.63 E-value=2.2e-08 Score=77.46 Aligned_cols=71 Identities=15% Similarity=0.348 Sum_probs=56.0
Q ss_pred eEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCccc
Q psy6451 64 YEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYE 135 (332)
Q Consensus 64 ~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~ 135 (332)
+.++ ++++|.+.+ +++.+++|.||++||++|+.+.+.|.+++..+.+ +.|+.+++...+-++...|...++
T Consensus 3 v~~l-~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 75 (107)
T 1dby_A 3 AGAV-NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIP 75 (107)
T ss_dssp CEEE-CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSC
T ss_pred cEec-cHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCC
Confidence 4566 457888866 5578899999999999999999999999999874 889999988766555555544443
No 289
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.63 E-value=8.7e-08 Score=82.73 Aligned_cols=41 Identities=17% Similarity=0.311 Sum_probs=36.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEEC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNV 189 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~ 189 (332)
.++++|+.||.+|||+|+.+.|.+.++.++++. +.|..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 467899999999999999999999999999987 77776655
No 290
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.62 E-value=5.7e-08 Score=81.19 Aligned_cols=94 Identities=11% Similarity=0.144 Sum_probs=64.2
Q ss_pred CChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC---hH----HHHhCCcccCcEEEEE
Q psy6451 138 PDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA---PF----LTERLRIKVIPTLTLV 210 (332)
Q Consensus 138 ~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~---~~----l~~~~~I~~~PTl~~~ 210 (332)
.....+.+.+... .|+| |++|||++|+.+.+.|+.+. +.|..+|++.. +. +++.+++.++|+++
T Consensus 37 ~~~~~~~~~i~~~-~Vvv-f~~~~Cp~C~~~k~~L~~~~-----i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if-- 107 (146)
T 2ht9_A 37 APVNQIQETISDN-CVVI-FSKTSCSYCTMAKKLFHDMN-----VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF-- 107 (146)
T ss_dssp CCHHHHHHHHHHC-SEEE-EECTTCHHHHHHHHHHHHHT-----CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--
T ss_pred HHHHHHHHHhcCC-CEEE-EECCCChhHHHHHHHHHHcC-----CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--
Confidence 3455666666655 4444 99999999999999998874 45667777765 43 77889999999984
Q ss_pred eCCeeeeeEecccCcchhhHh-HHHHHHHHHHHcCCc
Q psy6451 211 KDSVTKDYIVGFTELGNCADF-STEMLEWRIAQAGVI 246 (332)
Q Consensus 211 ~~G~~v~~~~G~~~~~~~~~f-~~~~Le~~L~~~g~l 246 (332)
.+|+.+. |..+. ..+ ....|+.+|...|+.
T Consensus 108 i~G~~ig---G~d~l---~~l~~~g~L~~~L~~~g~~ 138 (146)
T 2ht9_A 108 VNGTFIG---GATDT---HRLHKEGKLLPLVHQCYLK 138 (146)
T ss_dssp ETTEEEE---SHHHH---HHHHHTTCHHHHHHHTTC-
T ss_pred ECCEEEe---CchHH---HHHHHcChHHHHHHHcCcc
Confidence 5887653 32221 122 233578888877765
No 291
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.60 E-value=2.2e-08 Score=80.76 Aligned_cols=68 Identities=13% Similarity=0.183 Sum_probs=54.4
Q ss_pred CchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCcccc
Q psy6451 69 DEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 69 ~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
++..+.....+++++||+||++||++|+.+.+.|.+++..+. .+.|+.++++..+-++.+.+...+++
T Consensus 31 ~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 99 (128)
T 3ul3_B 31 GSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPT 99 (128)
T ss_dssp CCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSE
T ss_pred CccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCE
Confidence 333455555678899999999999999999999999999997 58999999988776666666555443
No 292
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.60 E-value=2.9e-08 Score=87.20 Aligned_cols=73 Identities=19% Similarity=0.305 Sum_probs=60.8
Q ss_pred ceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCcccc
Q psy6451 63 EYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
.+..+ +..+|...+.++.++||+||+|||++|+.+.+.|.+++..+.+ +.|+.+++...+-++...+...+++
T Consensus 98 ~v~~l-~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 171 (210)
T 3apq_A 98 EIITL-ERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPS 171 (210)
T ss_dssp TSEEC-CHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ceEEe-cHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCe
Confidence 46677 4688999888889999999999999999999999999999875 8999999987776666665554443
No 293
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.60 E-value=8.5e-08 Score=77.04 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=63.0
Q ss_pred hHHHHHhccCCcEEEEEecCCChhhHHH-HHHHHHHHHHcCCceEEEEECcCCh-------HHHHhCCcccCcEEEEEeC
Q psy6451 141 KKFFDLCKKSPNMVVHFYKDGSVNCKIL-DEHMKTLCKKHLETRFIKLNVERAP-------FLTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 141 ~~~~~~~~~~~~VvV~Fya~wc~~Ck~l-~~~l~~La~~~~~v~f~kVd~~~~~-------~l~~~~~I~~~PTl~~~~~ 212 (332)
..+.+.+.... |+.|++|||++|+.+ .+.|..+.. ..+.|..+|++..+ .+.+.+++.++|++ |.+
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~--~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~ 89 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV--PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YIN 89 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC--CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC--CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 34455555443 555999999999999 888776541 23788899998765 58888999999987 669
Q ss_pred CeeeeeEecccCcchhhHhHH-HHHHHHHHHcC
Q psy6451 213 SVTKDYIVGFTELGNCADFST-EMLEWRIAQAG 244 (332)
Q Consensus 213 G~~v~~~~G~~~~~~~~~f~~-~~Le~~L~~~g 244 (332)
|+.+. |+.. +..+.. ..|..+|...|
T Consensus 90 g~~ig---G~d~---l~~l~~~g~L~~~L~~~g 116 (118)
T 3c1r_A 90 GKHIG---GNDD---LQELRETGELEELLEPIL 116 (118)
T ss_dssp TEEEE---SHHH---HHHHHHHTHHHHHHHHHH
T ss_pred CEEEE---cHHH---HHHHHHCCcHHHHHHHcC
Confidence 98653 4332 233333 36777776554
No 294
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.60 E-value=1.7e-07 Score=81.09 Aligned_cols=42 Identities=10% Similarity=0.233 Sum_probs=38.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE 190 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~ 190 (332)
.++++|+.||++|||+|+.+.|.+.++.+++++ +.|..+++.
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 468899999999999999999999999999986 888888875
No 295
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.59 E-value=7.5e-08 Score=81.03 Aligned_cols=76 Identities=22% Similarity=0.261 Sum_probs=59.0
Q ss_pred cCCcEEEEEecCCCh-hhHHHHHHHHHHHHHcC----CceEEEEECcC---Ch-------------------------HH
Q psy6451 149 KSPNMVVHFYKDGSV-NCKILDEHMKTLCKKHL----ETRFIKLNVER---AP-------------------------FL 195 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~-~Ck~l~~~l~~La~~~~----~v~f~kVd~~~---~~-------------------------~l 195 (332)
++++|||+||++||+ +|....|.|.++..+|. ++.|+.|+++. .+ .+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 578999999999999 99999999999988875 28899998762 11 11
Q ss_pred HHh----------------CCcccCcEEEEE-eCCeeeeeEecccC
Q psy6451 196 TER----------------LRIKVIPTLTLV-KDSVTKDYIVGFTE 224 (332)
Q Consensus 196 ~~~----------------~~I~~~PTl~~~-~~G~~v~~~~G~~~ 224 (332)
+.. |++..+||++++ ++|+++.++.|...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~ 157 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVEN 157 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSS
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCC
Confidence 111 346678986666 79999999999754
No 296
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.59 E-value=4.3e-08 Score=84.72 Aligned_cols=75 Identities=8% Similarity=0.077 Sum_probs=61.3
Q ss_pred cceEecCCchhhhhhhcC--CCcEEEEEcc-------CCChhhhhhHHHHHHHHHhhh------hceeeecccCCCCccc
Q psy6451 62 GEYEEIPDEKKFFDLCKK--SPNMVVHFYK-------DGSVNCKILDEHMKTLCKKHL------ETRFIKLNVERAPFLT 126 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~--~~~vvVhFy~-------p~~~~Ck~~~~~l~~LA~~~~------~~~f~kvd~~k~pfl~ 126 (332)
..+.+|+ +.+|.+++.. ..+|||.|+| +||+.|+.|.|.|+++|..+. .+.|+++|++..+-++
T Consensus 18 ~~vi~lt-~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 18 TGVITVT-ADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TSEEECC-TTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred CCCEECC-HHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 4588895 6799998864 4469999999 499999999999999999985 4789999999888777
Q ss_pred ccCCCCccccc
Q psy6451 127 GQQGHGEYEEI 137 (332)
Q Consensus 127 ~k~g~g~~~ei 137 (332)
.+.|..+++++
T Consensus 97 ~~~~I~siPtl 107 (178)
T 3ga4_A 97 KDLKLQNVPHL 107 (178)
T ss_dssp HHTTCCSSCEE
T ss_pred HHcCCCCCCEE
Confidence 77776555443
No 297
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.55 E-value=8.5e-07 Score=79.36 Aligned_cols=131 Identities=11% Similarity=0.135 Sum_probs=86.9
Q ss_pred CCCcEEEEEc-cCCChhhh-hhHHHHHHHHHhhh--hc-eeeecccCC---------------CCccccc-------CCC
Q psy6451 79 KSPNMVVHFY-KDGSVNCK-ILDEHMKTLCKKHL--ET-RFIKLNVER---------------APFLTGQ-------QGH 131 (332)
Q Consensus 79 ~~~~vvVhFy-~p~~~~Ck-~~~~~l~~LA~~~~--~~-~f~kvd~~k---------------~pfl~~k-------~g~ 131 (332)
+++++|+.|| +.||+.|. .-.+.|.+++..|. ++ .++.+..+. .|++... .|.
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 3568999999 99999999 89999999988774 45 555554322 1111110 111
Q ss_pred ----------------------Cccc--c-----c------CChhHHHHHhccC---CcEEEEEecCCChhhHHHHHHHH
Q psy6451 132 ----------------------GEYE--E-----I------PDEKKFFDLCKKS---PNMVVHFYKDGSVNCKILDEHMK 173 (332)
Q Consensus 132 ----------------------g~~~--e-----i------~~e~~~~~~~~~~---~~VvV~Fya~wc~~Ck~l~~~l~ 173 (332)
|.+. . . .+.+++.+.+... ...|+.|+.+||+.|+.+...|+
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~i~~~~i~ly~~~~Cp~C~~a~~~L~ 191 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQHQVQESISIFTKPGCPFCAKAKQLLH 191 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTSCCCCCEEEEECSSCHHHHHHHHHHH
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhccccceEEEEECCCChHHHHHHHHHH
Confidence 1110 0 1 2445566666543 45577789999999999998887
Q ss_pred HHHHHcCCceEEEEECcCCh---HHHHhCCcccCcEEEEEeCCeee
Q psy6451 174 TLCKKHLETRFIKLNVERAP---FLTERLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 174 ~La~~~~~v~f~kVd~~~~~---~l~~~~~I~~~PTl~~~~~G~~v 216 (332)
.. ++.|-.+|++..+ .+.+.++...+|+++ .+|+.+
T Consensus 192 ~~-----~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~--~~g~~i 230 (241)
T 1nm3_A 192 DK-----GLSFEEIILGHDATIVSVRAVSGRTTVPQVF--IGGKHI 230 (241)
T ss_dssp HH-----TCCCEEEETTTTCCHHHHHHHTCCSSSCEEE--ETTEEE
T ss_pred Hc-----CCceEEEECCCchHHHHHHHHhCCCCcCEEE--ECCEEE
Confidence 64 4566667776554 477889999999975 477644
No 298
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.52 E-value=5.3e-08 Score=78.40 Aligned_cols=75 Identities=15% Similarity=0.269 Sum_probs=57.6
Q ss_pred cceEecCCchhhhhhh-cCCCcEEEEEccCCCh--------------hhhhhHHHHHHHHHhhh-hceeeecccCCCCcc
Q psy6451 62 GEYEEIPDEKKFFDLC-KKSPNMVVHFYKDGSV--------------NCKILDEHMKTLCKKHL-ETRFIKLNVERAPFL 125 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~--------------~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl 125 (332)
+.+.+++ ..+|...+ +++++++|.||+|||+ +|+.+.+.+.+++..+. .+.|++++++..+.+
T Consensus 3 ~~v~~l~-~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l 81 (123)
T 1oaz_A 3 DKIIHLT-DDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 81 (123)
T ss_dssp CSCEECC-STTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTT
T ss_pred CccEecC-hhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHH
Confidence 4577885 57887554 6778999999999999 99999999999999987 589999999988888
Q ss_pred cccCCCCccccc
Q psy6451 126 TGQQGHGEYEEI 137 (332)
Q Consensus 126 ~~k~g~g~~~ei 137 (332)
+.+.|...++++
T Consensus 82 ~~~~~v~~~Pt~ 93 (123)
T 1oaz_A 82 APKYGIRGIPTL 93 (123)
T ss_dssp GGGGTCCBSSEE
T ss_pred HHHcCCCccCEE
Confidence 887776665554
No 299
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.52 E-value=5.5e-08 Score=78.04 Aligned_cols=55 Identities=13% Similarity=0.143 Sum_probs=49.0
Q ss_pred EecCCchhhhhhhcC--CCcEEEEEccC-------CChhhhhhHHHHHHHHHhhh-hceeeeccc
Q psy6451 65 EEIPDEKKFFDLCKK--SPNMVVHFYKD-------GSVNCKILDEHMKTLCKKHL-ETRFIKLNV 119 (332)
Q Consensus 65 ~ev~~e~~f~~~~~~--~~~vvVhFy~p-------~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~ 119 (332)
..+.+..+|.+.+.. +.+++|+||++ ||++|+.+.|.|.+++..++ .+.|+++++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~ 71 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQV 71 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEEC
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEEC
Confidence 445577899998876 78899999999 99999999999999999996 689999998
No 300
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.51 E-value=4.9e-08 Score=77.83 Aligned_cols=61 Identities=8% Similarity=0.015 Sum_probs=56.5
Q ss_pred cceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCC
Q psy6451 62 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAP 123 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~p 123 (332)
|...+|++.++|.++++...+++|.|++.||+.|+.+.+.|++++.. +++.|+++|+.+.+
T Consensus 6 ~~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r 66 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYYLIVQQER 66 (112)
T ss_dssp GCEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGH
T ss_pred cceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCc
Confidence 67899999999999999899999999999999999999999999986 88999999988764
No 301
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.51 E-value=5.2e-08 Score=77.18 Aligned_cols=54 Identities=9% Similarity=0.110 Sum_probs=45.1
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceee
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFI 115 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~ 115 (332)
...+..+ +..+|.+.+.++.+++|.||+|||++|+.+.|.|.+++..+. .+.++
T Consensus 11 ~~~~~~~-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~ 65 (118)
T 1zma_A 11 IKDLEVT-TVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFI 65 (118)
T ss_dssp TTTSEEC-CHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEE
T ss_pred HhhhhcC-CHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEE
Confidence 4466777 467899999888999999999999999999999999998874 34444
No 302
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.46 E-value=7.9e-07 Score=79.14 Aligned_cols=75 Identities=11% Similarity=0.169 Sum_probs=61.4
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHc--CCceEEEEECcCC----------------------------hHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKH--LETRFIKLNVERA----------------------------PFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~--~~v~f~kVd~~~~----------------------------~~l~~ 197 (332)
++++|||.|| ++||++|....|.|.++..+| .++.++-|..+.. ..+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 5689999999 999999999999999999888 4578887776531 13667
Q ss_pred hCCc-----ccCcEEEEE-eCCeeeeeEeccc
Q psy6451 198 RLRI-----KVIPTLTLV-KDSVTKDYIVGFT 223 (332)
Q Consensus 198 ~~~I-----~~~PTl~~~-~~G~~v~~~~G~~ 223 (332)
.|++ ..+|+++++ ++|+++....|..
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~ 166 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDL 166 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECT
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCC
Confidence 7888 478999998 5999999988854
No 303
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.46 E-value=2.8e-07 Score=72.11 Aligned_cols=67 Identities=13% Similarity=0.128 Sum_probs=50.6
Q ss_pred HHHHHhccCCcEEEEEec-----CCChhhHHHHHHHHHHHHHcCCceEEEEECcCChH----HHHhCCcccCcEEEEEeC
Q psy6451 142 KFFDLCKKSPNMVVHFYK-----DGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPF----LTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 142 ~~~~~~~~~~~VvV~Fya-----~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~----l~~~~~I~~~PTl~~~~~ 212 (332)
.+.+.++.+ .|+| |++ |||++|+.+.+.|..+ ++.|..+|++..+. +...+++.++|++ |.+
T Consensus 9 ~~~~~i~~~-~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-----~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~i~ 79 (105)
T 2yan_A 9 RLKVLTNKA-SVML-FMKGNKQEAKCGFSKQILEILNST-----GVEYETFDILEDEEVRQGLKAYSNWPTYPQL--YVK 79 (105)
T ss_dssp HHHHHHTSS-SEEE-EESBCSSSBCTTHHHHHHHHHHHH-----TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EET
T ss_pred HHHHHhccC-CEEE-EEecCCCCCCCccHHHHHHHHHHC-----CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE--EEC
Confidence 445555544 4555 676 9999999999999876 37788999998876 4455799999998 568
Q ss_pred Ceeee
Q psy6451 213 SVTKD 217 (332)
Q Consensus 213 G~~v~ 217 (332)
|+.+.
T Consensus 80 g~~ig 84 (105)
T 2yan_A 80 GELVG 84 (105)
T ss_dssp TEEEE
T ss_pred CEEEe
Confidence 87653
No 304
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.45 E-value=3.6e-07 Score=82.38 Aligned_cols=77 Identities=17% Similarity=0.225 Sum_probs=58.1
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc---------------------------------------
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE--------------------------------------- 190 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~--------------------------------------- 190 (332)
.+.+|+.|+.+|||+|+.+.+.+..+.+. .++.|..+...
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~-g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~~ 175 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS-GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPA 175 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT-TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCCS
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC-CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCccc
Confidence 46789999999999999999999988775 35666655431
Q ss_pred -----------CChHHHHhCCcccCcEEEEEe-CCeeeeeEecccCcchh
Q psy6451 191 -----------RAPFLTERLRIKVIPTLTLVK-DSVTKDYIVGFTELGNC 228 (332)
Q Consensus 191 -----------~~~~l~~~~~I~~~PTl~~~~-~G~~v~~~~G~~~~~~~ 228 (332)
....+++.++|.++||+++.. +|+. ..+.|+.+...+
T Consensus 176 ~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L 224 (241)
T 1v58_A 176 NVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLPDQKTL 224 (241)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSCCHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCCCHHHH
Confidence 112356789999999999987 5864 567887665443
No 305
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.81 E-value=2.5e-08 Score=76.44 Aligned_cols=72 Identities=19% Similarity=0.344 Sum_probs=56.4
Q ss_pred eEecCCchhhhhhh-cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCcccc
Q psy6451 64 YEEIPDEKKFFDLC-KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEE 136 (332)
Q Consensus 64 ~~ev~~e~~f~~~~-~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~e 136 (332)
+.+++ ..+|.+.+ .++++++|.||++||++|+.+.+.+.+++..+. .+.|+.+++...+.++...+...+++
T Consensus 3 v~~l~-~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 76 (106)
T 2yj7_A 3 VIEVT-DENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPT 76 (106)
Confidence 45564 45666544 667889999999999999999999999999997 58899999887776666666554443
No 306
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.44 E-value=1.2e-07 Score=93.35 Aligned_cols=75 Identities=12% Similarity=0.144 Sum_probs=62.1
Q ss_pred CcceEecCCchhhhhhhcCC--CcEEEEEccCCChhhhhhHHHHHHHHHhhh---------hceeeecccCCCCcccccC
Q psy6451 61 HGEYEEIPDEKKFFDLCKKS--PNMVVHFYKDGSVNCKILDEHMKTLCKKHL---------ETRFIKLNVERAPFLTGQQ 129 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~--~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~---------~~~f~kvd~~k~pfl~~k~ 129 (332)
.+.+.+++ ..+|.+++... .+|||+||+|||++|+.+.|.|.++|..+. .+.|++||++..+-++.+.
T Consensus 22 ~~~V~~Lt-~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y 100 (470)
T 3qcp_A 22 DSSVVDLS-GDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKY 100 (470)
T ss_dssp CTTEEECS-CSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHT
T ss_pred CCCcEECC-HHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHc
Confidence 36788995 57999888654 679999999999999999999999999997 3899999999877666666
Q ss_pred CCCcccc
Q psy6451 130 GHGEYEE 136 (332)
Q Consensus 130 g~g~~~e 136 (332)
+...+++
T Consensus 101 ~V~~~PT 107 (470)
T 3qcp_A 101 DINFVPR 107 (470)
T ss_dssp TCCSSCE
T ss_pred CCCccCe
Confidence 6555444
No 307
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.43 E-value=2.3e-07 Score=68.46 Aligned_cols=57 Identities=12% Similarity=0.083 Sum_probs=49.2
Q ss_pred CcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccccc
Q psy6451 81 PNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 81 ~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
...||.||++||++|+.+.+.|.+++..++ .+.|+.++....+-+..+.|...++++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 60 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTI 60 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEE
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEE
Confidence 467999999999999999999999999998 689999999988877777776665544
No 308
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.42 E-value=8.2e-08 Score=78.11 Aligned_cols=58 Identities=17% Similarity=0.312 Sum_probs=50.5
Q ss_pred ceEecCCchhhhhhhcC--CCcEEEEEccCCChhhhhhHHHH---HHHHHhhhhceeeecccC
Q psy6451 63 EYEEIPDEKKFFDLCKK--SPNMVVHFYKDGSVNCKILDEHM---KTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~~--~~~vvVhFy~p~~~~Ck~~~~~l---~~LA~~~~~~~f~kvd~~ 120 (332)
.+..+++..+|...+.. ++++||.||++||+.|+.+.+.+ ..++..+.++.|+.+++.
T Consensus 12 ~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~ 74 (134)
T 2fwh_A 12 NFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT 74 (134)
T ss_dssp CCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECT
T ss_pred CcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCC
Confidence 46677778888877753 78999999999999999999999 999999999999999884
No 309
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.41 E-value=1.7e-06 Score=73.49 Aligned_cols=77 Identities=8% Similarity=-0.078 Sum_probs=59.8
Q ss_pred cCCcEEEEEe-cCCChhhHH-HHHHHHHHHHHcC--Cc-eEEEEECcCC-----------------------hHHHHhCC
Q psy6451 149 KSPNMVVHFY-KDGSVNCKI-LDEHMKTLCKKHL--ET-RFIKLNVERA-----------------------PFLTERLR 200 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~-l~~~l~~La~~~~--~v-~f~kVd~~~~-----------------------~~l~~~~~ 200 (332)
++++|||.|| ++||++|.. ..|.|.+++.++. ++ .++-|..+.. ..++..|+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~g 109 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVD 109 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcC
Confidence 4677888886 999999999 9999999988874 58 8888876531 23667788
Q ss_pred cccC-----------cEEEEEeCCeeeeeEecccCc
Q psy6451 201 IKVI-----------PTLTLVKDSVTKDYIVGFTEL 225 (332)
Q Consensus 201 I~~~-----------PTl~~~~~G~~v~~~~G~~~~ 225 (332)
+... |+.+++++|+++...++....
T Consensus 110 v~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~~~~ 145 (167)
T 2wfc_A 110 MELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEPDGK 145 (167)
T ss_dssp CEECCHHHHSSCEECCEEEEEETTEEEEEEECTTSS
T ss_pred CccccccccCcccceEEEEEEeCCEEEEEEecCCCC
Confidence 8654 876666999999998886543
No 310
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.40 E-value=1e-07 Score=76.22 Aligned_cols=61 Identities=11% Similarity=0.094 Sum_probs=48.8
Q ss_pred hhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhh-hhceeeecc--cCCCCcccccCCCCccc
Q psy6451 75 DLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LETRFIKLN--VERAPFLTGQQGHGEYE 135 (332)
Q Consensus 75 ~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~-~~~~f~kvd--~~k~pfl~~k~g~g~~~ 135 (332)
....+++++||.||++||++|+.+.+.|.+++..+ ..+.|+.++ ....+.++...+...++
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~P 84 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVP 84 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSS
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCccee
Confidence 55667889999999999999999999999999998 678999998 66555555555544433
No 311
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.39 E-value=1.8e-07 Score=76.42 Aligned_cols=99 Identities=17% Similarity=0.251 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-h
Q psy6451 33 DSIEKLREDHLKKLKAKAKRNQELKALGHGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-E 111 (332)
Q Consensus 33 ~~l~~~r~~Rl~el~~~~~~~~~~~~~g~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~ 111 (332)
+.+.++|.+|+.+++.-..... ..|.+.+++ .++|...+.++..+||+||++||++|+.+.+.|.+++..++ .
T Consensus 9 ~~~~~~~~~r~~~~~~~~~c~~-----~~~~v~~l~-~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~ 82 (140)
T 1v98_A 9 GAKNRLGTPPPGQVPVCGACKT-----PLPWVVEAD-EKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR 82 (140)
T ss_dssp ----------------------------------------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT
T ss_pred cccccCCcccccCCcccccccC-----CCCccccCC-HHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc
Confidence 4688999999999876554322 248899995 67898888666569999999999999999999999999998 5
Q ss_pred ceeeecccCCCCcccccCCCCccccc
Q psy6451 112 TRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 112 ~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
+.|+.+++...+.++...+...++++
T Consensus 83 v~~~~vd~~~~~~l~~~~~v~~~Pt~ 108 (140)
T 1v98_A 83 LKVVKVNVDEHPGLAARYGVRSVPTL 108 (140)
T ss_dssp EEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eEEEEEECCCCHHHHHHCCCCccCEE
Confidence 89999999887766666665555443
No 312
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.39 E-value=5.1e-07 Score=71.41 Aligned_cols=89 Identities=17% Similarity=0.214 Sum_probs=56.9
Q ss_pred HHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC----hH----HHHhCCcccCcEEEEEeCC
Q psy6451 142 KFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA----PF----LTERLRIKVIPTLTLVKDS 213 (332)
Q Consensus 142 ~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~----~~----l~~~~~I~~~PTl~~~~~G 213 (332)
.+.+.++.++ |+.|++||||+|+.+.+.|+++ ++.|..+|++.. +. +...++...+|++ |.+|
T Consensus 11 ~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~-----~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~g 81 (113)
T 3rhb_A 11 SIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL-----GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVCG 81 (113)
T ss_dssp HHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EETT
T ss_pred HHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc-----CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EECC
Confidence 3444455554 6669999999999999999875 345566777653 22 5556799999998 5689
Q ss_pred eeeeeEecccCcchhhHhH-HHHHHHHHHHcCC
Q psy6451 214 VTKDYIVGFTELGNCADFS-TEMLEWRIAQAGV 245 (332)
Q Consensus 214 ~~v~~~~G~~~~~~~~~f~-~~~Le~~L~~~g~ 245 (332)
+.+. |+... ..+. ...|..+|...|.
T Consensus 82 ~~ig---G~~~~---~~~~~~g~L~~~l~~~~~ 108 (113)
T 3rhb_A 82 KHIG---GCTDT---VKLNRKGDLELMLAEANG 108 (113)
T ss_dssp EEEE---SHHHH---HHHHHHTHHHHHHTC---
T ss_pred EEEc---CcHHH---HHHHHcCCHHHHHHHHhh
Confidence 7654 33322 2222 3367777765554
No 313
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.39 E-value=1.4e-06 Score=76.88 Aligned_cols=77 Identities=10% Similarity=0.179 Sum_probs=62.2
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcCC----------------------------hHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERA----------------------------PFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~~----------------------------~~l~~ 197 (332)
+++++||.|| ++||++|....|.|.++..+|. ++.++-|.++.. ..+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 4679999999 9999999999999999999884 488887776521 23666
Q ss_pred hCCcc------cCcEEEEE-eCCeeeeeEecccCc
Q psy6451 198 RLRIK------VIPTLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 198 ~~~I~------~~PTl~~~-~~G~~v~~~~G~~~~ 225 (332)
.|++. .+|+++++ ++|+++....|....
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~ 161 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPV 161 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTB
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCC
Confidence 78884 69999998 599999998886443
No 314
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.38 E-value=1.9e-06 Score=73.65 Aligned_cols=76 Identities=11% Similarity=0.117 Sum_probs=60.6
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCC---------------------hHHHHhCCccc-
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERA---------------------PFLTERLRIKV- 203 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~---------------------~~l~~~~~I~~- 203 (332)
++++|||.|| +.||++|....|.|.++..+|.. +.++-|..+.. ..++..|++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 4678999998 99999999999999999998864 77887777632 24677888864
Q ss_pred -----------CcEEEEE-eCCeeeeeEecccC
Q psy6451 204 -----------IPTLTLV-KDSVTKDYIVGFTE 224 (332)
Q Consensus 204 -----------~PTl~~~-~~G~~v~~~~G~~~ 224 (332)
.|+++++ ++|+++..+.+...
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~ 162 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKV 162 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBEEEEECSCCS
T ss_pred ccccCcccCCcceEEEEECCCCEEEEEEcCCCC
Confidence 6888888 59999988866543
No 315
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.37 E-value=1.6e-07 Score=75.83 Aligned_cols=54 Identities=17% Similarity=0.295 Sum_probs=44.5
Q ss_pred cCCCcEEEEEccCCChhhhhhHHHHH--HHHHhh-hhceeeeccc---CCCCcccccCCC
Q psy6451 78 KKSPNMVVHFYKDGSVNCKILDEHMK--TLCKKH-LETRFIKLNV---ERAPFLTGQQGH 131 (332)
Q Consensus 78 ~~~~~vvVhFy~p~~~~Ck~~~~~l~--~LA~~~-~~~~f~kvd~---~k~pfl~~k~g~ 131 (332)
.+++++||+||++||++|+.+.+.|. .++..+ ..+.|+.+++ ...+-++...+.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v 86 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGD 86 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTC
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCC
Confidence 45789999999999999999999999 999988 5789999998 555545554444
No 316
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.37 E-value=3.7e-06 Score=68.18 Aligned_cols=81 Identities=11% Similarity=0.067 Sum_probs=68.1
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEeCC
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVKDS 213 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~G 213 (332)
..+|++.+++...+.....+||-|+++||++| .+.|.++|..++.+.|+.++. +.+++.|++. .|++++|+.+
T Consensus 23 ~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~~d~~F~~t~~---~~v~~~~~v~-~~~vvlfkkf 95 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKFPGVSFGISTD---SEVLTHYNIT-GNTICLFRLV 95 (124)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHCTTSEEEEECC---HHHHHHTTCC-SSCEEEEETT
T ss_pred ceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhCCCceEEEECh---HHHHHHcCCC-CCeEEEEEcC
Confidence 45688999999999999999999999999999 678999999997799987754 6789999998 8999999986
Q ss_pred e-eeeeEec
Q psy6451 214 V-TKDYIVG 221 (332)
Q Consensus 214 ~-~v~~~~G 221 (332)
. ....+.|
T Consensus 96 de~~~~~~g 104 (124)
T 2l4c_A 96 DNEQLNLED 104 (124)
T ss_dssp TTEEEEECH
T ss_pred CCCceeecC
Confidence 5 3333443
No 317
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.36 E-value=4.5e-07 Score=68.43 Aligned_cols=57 Identities=7% Similarity=0.195 Sum_probs=46.6
Q ss_pred EEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc--CChHHHHhC-CcccCcEEEEEeCCeee
Q psy6451 153 MVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE--RAPFLTERL-RIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 153 VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~--~~~~l~~~~-~I~~~PTl~~~~~G~~v 216 (332)
-|+.|+++||++|+.+.+.|+.+ ++.|..+|++ ..+.+.+.+ ++.++|+++ .+|+.+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~-----~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~i 66 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK-----GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYHV 66 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH-----TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEEC
T ss_pred eEEEEECCCChhHHHHHHHHHHc-----CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEEE
Confidence 36779999999999999988875 3678888888 556678888 999999984 488754
No 318
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.35 E-value=1.4e-07 Score=78.39 Aligned_cols=74 Identities=8% Similarity=0.078 Sum_probs=50.4
Q ss_pred ceEecCCchhhhhhhcCCCcEEEEEccCC--ChhhhhhHHHHHHHHHhhhhce--eeecccCCCCcccccCCCCccccc
Q psy6451 63 EYEEIPDEKKFFDLCKKSPNMVVHFYKDG--SVNCKILDEHMKTLCKKHLETR--FIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~~~~~vvVhFy~p~--~~~Ck~~~~~l~~LA~~~~~~~--f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.+.++++ .+|.+++..+..+||.|+++| |+.|+.|.|.|.++|..|..+. |+++|++..+-++.+.+...++++
T Consensus 18 ~~~~l~~-~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 18 GWQPVEA-STVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRRFPAT 95 (142)
T ss_dssp TCEECCC-C--------CCSEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCCSSSEE
T ss_pred cCccccc-ccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCCCcCCeE
Confidence 5777864 899999988888999999887 9999999999999999996688 999999887777776666655443
No 319
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.35 E-value=1.5e-06 Score=77.73 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=61.7
Q ss_pred cCCcEEEEEe-cCCChhhH-HHHHHHHHHHHHcC--Cc-eEEEEECcCC----------------------hHHHHhCCc
Q psy6451 149 KSPNMVVHFY-KDGSVNCK-ILDEHMKTLCKKHL--ET-RFIKLNVERA----------------------PFLTERLRI 201 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck-~l~~~l~~La~~~~--~v-~f~kVd~~~~----------------------~~l~~~~~I 201 (332)
++++|||.|| ++||++|. ...|.|.+++.+|. ++ .++.|..+.. ..++..|++
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 5678999999 99999999 89999999998874 58 8888887631 236777887
Q ss_pred c-----------cCcEEEEEeCCeeeeeEecccCc
Q psy6451 202 K-----------VIPTLTLVKDSVTKDYIVGFTEL 225 (332)
Q Consensus 202 ~-----------~~PTl~~~~~G~~v~~~~G~~~~ 225 (332)
. .+|+.+++++|+++....|....
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~ 146 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEP 146 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCS
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCC
Confidence 6 35876666999999999987655
No 320
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.35 E-value=1.1e-06 Score=66.64 Aligned_cols=80 Identities=19% Similarity=0.303 Sum_probs=54.7
Q ss_pred EEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHH----HHhCCcccCcEEEEEeCCeeeeeEecccCcchh
Q psy6451 153 MVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFL----TERLRIKVIPTLTLVKDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 153 VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l----~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~ 228 (332)
-|+.|++|||++|+.+.+.|+++ ++.|..+|++..+.. .+.+++.++|++ |.+|+.+. |+.. +
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-----~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i~---g~~~---i 73 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-----GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHVG---GCDD---L 73 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-----TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEEE---SHHH---H
T ss_pred cEEEEECCCChhHHHHHHHHHHc-----CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEEc---CHHH---H
Confidence 36789999999999999888764 477888898877644 447899999975 45887543 3322 2
Q ss_pred hHhHHH-HHHHHHHHcCCc
Q psy6451 229 ADFSTE-MLEWRIAQAGVI 246 (332)
Q Consensus 229 ~~f~~~-~Le~~L~~~g~l 246 (332)
..+..+ .|+.+|. .|.+
T Consensus 74 ~~~~~~~~l~~~l~-~g~~ 91 (92)
T 2khp_A 74 YALEDEGKLDSLLK-TGKL 91 (92)
T ss_dssp HHHHTTTCHHHHHH-HSSC
T ss_pred HHHHHcCCHHHHHh-ccCc
Confidence 233322 4666665 5544
No 321
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.34 E-value=3.6e-07 Score=67.39 Aligned_cols=56 Identities=13% Similarity=0.005 Sum_probs=48.9
Q ss_pred cEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCcccccCCCCccccc
Q psy6451 82 NMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 82 ~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
..||.||+|||++|+.+.+.|.+++..++ .+.|+.++++..+-+..+.|...++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 59 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAI 59 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEE
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEE
Confidence 46899999999999999999999999998 689999999988888887777666554
No 322
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.34 E-value=2.2e-06 Score=73.82 Aligned_cols=76 Identities=11% Similarity=0.016 Sum_probs=60.3
Q ss_pred cCCcEEEEEec-CCChhhHHHHHHHHHHHHHcC--CceEEEEECcCC-------------------------hHHHHhCC
Q psy6451 149 KSPNMVVHFYK-DGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERA-------------------------PFLTERLR 200 (332)
Q Consensus 149 ~~~~VvV~Fya-~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~~-------------------------~~l~~~~~ 200 (332)
++++|||.||+ +||++|....|.|.++..+|. ++.++.|..+.. ..+++.|+
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 46899999995 999999999999999988875 478887776521 23566788
Q ss_pred cc------cCcEEEEE-eCCeeeeeEecccC
Q psy6451 201 IK------VIPTLTLV-KDSVTKDYIVGFTE 224 (332)
Q Consensus 201 I~------~~PTl~~~-~~G~~v~~~~G~~~ 224 (332)
+. .+|+++++ ++|+++..+.|...
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~ 139 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEG 139 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTT
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCC
Confidence 76 37999998 49999999988643
No 323
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.34 E-value=1.2e-06 Score=79.60 Aligned_cols=100 Identities=13% Similarity=0.065 Sum_probs=73.0
Q ss_pred cCCc-EEEEEecCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC---------------------------ChHHHHh
Q psy6451 149 KSPN-MVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER---------------------------APFLTER 198 (332)
Q Consensus 149 ~~~~-VvV~Fya~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~---------------------------~~~l~~~ 198 (332)
++++ ||+.||++||++|....+.|.+++.+|. ++.++.|+++. ...++..
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ 111 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARR 111 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHH
Confidence 5565 5668899999999999999999999886 58898888753 2357888
Q ss_pred CCcc-------cCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH--HHcCCccc
Q psy6451 199 LRIK-------VIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI--AQAGVIDY 248 (332)
Q Consensus 199 ~~I~-------~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L--~~~g~l~~ 248 (332)
|++. .+|+++++ ++|+++....|..+.+.-.+-+...|+.+. ..+|+...
T Consensus 112 ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~~~~~~~~~P 171 (249)
T 3a2v_A 112 LGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVP 171 (249)
T ss_dssp HTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHTCBBC
T ss_pred hCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHhccccCccCC
Confidence 9987 89998888 599999999887654322233344454443 24565543
No 324
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.32 E-value=7.5e-07 Score=74.63 Aligned_cols=77 Identities=12% Similarity=0.134 Sum_probs=54.0
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCC---------------------hHHHHhCCcc--
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERA---------------------PFLTERLRIK-- 202 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~---------------------~~l~~~~~I~-- 202 (332)
++++||+.|| ++||++|....|.|.++..++.. +.++.|..+.. ..+++.||+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 5789999999 99999999999999998888754 78888876632 2466778774
Q ss_pred ---------cCcEEEEE-eCCeeeeeEecccCc
Q psy6451 203 ---------VIPTLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 203 ---------~~PTl~~~-~~G~~v~~~~G~~~~ 225 (332)
..||++++ ++|+++...+|....
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~ 141 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPT 141 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBEEEEEEESSTT
T ss_pred cccCCCcceeeeeEEEECCCCEEEEEEECCCCC
Confidence 46777777 689999888776443
No 325
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.29 E-value=2.3e-06 Score=75.43 Aligned_cols=41 Identities=2% Similarity=-0.161 Sum_probs=35.5
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 190 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~ 190 (332)
++++|||.|||+||++| ...|.|.+|..+|.+ +.++.|.++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 57899999999999999 678999999999864 888888754
No 326
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.27 E-value=3.6e-06 Score=70.71 Aligned_cols=74 Identities=9% Similarity=0.097 Sum_probs=59.4
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCCceEEEEECcC-----------------------ChHHHHhCCccc-
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLETRFIKLNVER-----------------------APFLTERLRIKV- 203 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~-----------------------~~~l~~~~~I~~- 203 (332)
+++++||.|| +.||++|....|.|.++..+|.++.++-|..+. ...++..|++..
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~ 121 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQ 121 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEEC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCceec
Confidence 4679999999 899999999999999999988667777776542 134666788754
Q ss_pred --------CcEEEEE-eCCeeeeeEecc
Q psy6451 204 --------IPTLTLV-KDSVTKDYIVGF 222 (332)
Q Consensus 204 --------~PTl~~~-~~G~~v~~~~G~ 222 (332)
.|+.+++ ++|+++..+.|.
T Consensus 122 ~~~~~g~~~p~~~liD~~G~i~~~~~~~ 149 (165)
T 1q98_A 122 TGPLAGLTSRAVIVLDEQNNVLHSQLVE 149 (165)
T ss_dssp SSTTTTSBCCEEEEECTTSBEEEEEECS
T ss_pred ccccCCccceeEEEEcCCCEEEEEEeCC
Confidence 4998888 599999998863
No 327
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.26 E-value=5e-06 Score=69.58 Aligned_cols=76 Identities=5% Similarity=-0.032 Sum_probs=60.0
Q ss_pred cCCcEEEEEec-CCChhhHHHHHHHHHHHHHcCCceEEEEECcC-----------------------ChHHHHhCCcc--
Q psy6451 149 KSPNMVVHFYK-DGSVNCKILDEHMKTLCKKHLETRFIKLNVER-----------------------APFLTERLRIK-- 202 (332)
Q Consensus 149 ~~~~VvV~Fya-~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~-----------------------~~~l~~~~~I~-- 202 (332)
+++++||.||+ .||++|....|.|.++..+|.++.++.|..+. ...+++.|++.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~ 120 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGLDNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLIN 120 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBCT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCccc
Confidence 46799999995 99999999999999999888667787776652 12356667776
Q ss_pred --c--CcEEEEE-eCCeeeeeEecccC
Q psy6451 203 --V--IPTLTLV-KDSVTKDYIVGFTE 224 (332)
Q Consensus 203 --~--~PTl~~~-~~G~~v~~~~G~~~ 224 (332)
+ .|+++++ ++|+++..+.|...
T Consensus 121 ~~g~~~p~~~liD~~G~i~~~~~g~~~ 147 (163)
T 1psq_A 121 EWHLLARAVFVLDTDNTIRYVEYVDNI 147 (163)
T ss_dssp TTCSBCCEEEEECTTCBEEEEEECSBT
T ss_pred cCCceEEEEEEEcCCCeEEEEEecCCc
Confidence 3 3999888 59999999988633
No 328
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.26 E-value=3e-06 Score=75.18 Aligned_cols=41 Identities=2% Similarity=-0.113 Sum_probs=36.0
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 190 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~ 190 (332)
++++|||.|||+||++|. ..|.|++|.++|.. +.++.|.++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 578999999999999999 78899999999864 888888764
No 329
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.26 E-value=5.7e-06 Score=71.76 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=37.0
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEECc
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE 190 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~~ 190 (332)
.++++||.||.+|||+|+.+.|.+.++.+++++ +.|..+.+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 357899999999999999999999999999986 778777753
No 330
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.25 E-value=1.7e-06 Score=66.48 Aligned_cols=77 Identities=12% Similarity=0.196 Sum_probs=57.1
Q ss_pred EEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhC-----CcccCcEEEEEeCCeeeeeEecccCcch
Q psy6451 153 MVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERL-----RIKVIPTLTLVKDSVTKDYIVGFTELGN 227 (332)
Q Consensus 153 VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~-----~I~~~PTl~~~~~G~~v~~~~G~~~~~~ 227 (332)
-|+.|.+||||.|......|.+ .++.|..+|++..+...+.+ |.+.+|+|+ +.+|..+ +
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~-----~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~~l---~------- 68 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA-----NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGSTL---T------- 68 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH-----TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSCEE---E-------
T ss_pred cEEEEcCCCCHhHHHHHHHHHh-----cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCEEE---e-------
Confidence 3677899999999999977765 35888999999988754432 788999975 4677543 2
Q ss_pred hhHhHHHHHHHHHHHcCCcc
Q psy6451 228 CADFSTEMLEWRIAQAGVID 247 (332)
Q Consensus 228 ~~~f~~~~Le~~L~~~g~l~ 247 (332)
+|..+.|++.|.+.+.|.
T Consensus 69 --~~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 69 --NPSADEVKAKLVKIAGLE 86 (92)
T ss_dssp --SCCHHHHHHHHHHHHCCS
T ss_pred --CCCHHHHHHHHHHhcCCc
Confidence 234566788888877764
No 331
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.24 E-value=7.4e-07 Score=80.91 Aligned_cols=113 Identities=12% Similarity=0.101 Sum_probs=81.1
Q ss_pred cceEecCCchhhhhhhcCCCcEEEEEc--cCCChhhhhhHHHHHHHHHhhh----hceeeecccCC-----CCcccccCC
Q psy6451 62 GEYEEIPDEKKFFDLCKKSPNMVVHFY--KDGSVNCKILDEHMKTLCKKHL----ETRFIKLNVER-----APFLTGQQG 130 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~~~~vvVhFy--~p~~~~Ck~~~~~l~~LA~~~~----~~~f~kvd~~k-----~pfl~~k~g 130 (332)
+.+.+++ +.+|.++++++.+|||.|| +|||+ |.|.|.++|..+. .+.|+++|+.. .+-++.+.+
T Consensus 16 ~~v~~Lt-~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 16 TGCVDLD-ELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp TTCEECC-TTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCcEECC-HHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 4678885 5899998888889999999 99998 9999999999984 48999999877 555555555
Q ss_pred CC--ccccc------------------CChhHHHHHhccC--------------CcEEEEEecCCChhhHHHHHHHHHHH
Q psy6451 131 HG--EYEEI------------------PDEKKFFDLCKKS--------------PNMVVHFYKDGSVNCKILDEHMKTLC 176 (332)
Q Consensus 131 ~g--~~~ei------------------~~e~~~~~~~~~~--------------~~VvV~Fya~wc~~Ck~l~~~l~~La 176 (332)
.. .++++ .+.+.+...+.+. ..++..|+++||..|..+.+.++.++
T Consensus 91 V~~~~~PTl~~F~G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~~~~~g~i~~~d~l~~~f~~~~~~~~~~~~~~~~~~~ 170 (248)
T 2c0g_A 91 VDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCIKEFNEVLKNYANIPDAEQLKLIEKLQAKQ 170 (248)
T ss_dssp CCTTSCCEEEEESSSSSSEEECCTTSCCCHHHHHHHHHHHSSCCCCCTTCCHHHHHHHTTGGGSCHHHHHHHHHHHHHHH
T ss_pred CCcCCCCeEEEEeCCcCcceeecccCCCCHHHHHHHHHHhhccccCCCCchHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 44 33222 2334455554322 12234577888888888888887777
Q ss_pred HHc
Q psy6451 177 KKH 179 (332)
Q Consensus 177 ~~~ 179 (332)
...
T Consensus 171 ~~l 173 (248)
T 2c0g_A 171 EQL 173 (248)
T ss_dssp HHC
T ss_pred HHc
Confidence 665
No 332
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.23 E-value=4e-06 Score=75.50 Aligned_cols=78 Identities=13% Similarity=0.224 Sum_probs=63.9
Q ss_pred cCCcEEEEEec-CCChhhHHHHHHHHHHHHHcC--CceEEEEECcCC----------------------------hHHHH
Q psy6451 149 KSPNMVVHFYK-DGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERA----------------------------PFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fya-~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~~----------------------------~~l~~ 197 (332)
++++|||.||+ +||++|....|.|.+++.+|. ++.++-|.++.. ..++.
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 46899999999 999999999999999999985 478887776531 24677
Q ss_pred hCCcc------cCcEEEEE-eCCeeeeeEecccCcc
Q psy6451 198 RLRIK------VIPTLTLV-KDSVTKDYIVGFTELG 226 (332)
Q Consensus 198 ~~~I~------~~PTl~~~-~~G~~v~~~~G~~~~~ 226 (332)
.|++. .+|+++++ ++|+++....+....+
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~ 191 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVG 191 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBC
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCC
Confidence 89987 68999888 5999999988765544
No 333
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.23 E-value=1.9e-06 Score=70.01 Aligned_cols=71 Identities=13% Similarity=0.129 Sum_probs=60.9
Q ss_pred CcceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccCCCCcccccCCCCc
Q psy6451 61 HGEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVERAPFLTGQQGHGE 133 (332)
Q Consensus 61 ~G~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~k~pfl~~k~g~g~ 133 (332)
...+.++| ..+|.+++....+|+|.||++ |+.|+.+.+.|.++|..|.+ +.|+++|++..+-+....|...
T Consensus 5 ~plv~~~t-~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~ 76 (133)
T 2djk_A 5 SPLIGEIG-PETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKT 76 (133)
T ss_dssp CCCSEECC-HHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCS
T ss_pred cCceeccC-hHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCc
Confidence 34577885 578988888888999999999 89999999999999999975 8999999998887777777654
No 334
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.23 E-value=3.3e-06 Score=65.61 Aligned_cols=61 Identities=10% Similarity=0.083 Sum_probs=48.2
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhC-----CcccCcEEEEEeCCeeee
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERL-----RIKVIPTLTLVKDSVTKD 217 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~-----~I~~~PTl~~~~~G~~v~ 217 (332)
+..-|+.|++|||+.|+.+.+.|+++ ++.|..+|++..+.+.+.+ +...+|++ |.+|+.+.
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~-----~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~ig 79 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK-----GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHIG 79 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC-----CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEEe
Confidence 45567789999999999999999876 3677889998887655444 89999987 56887553
No 335
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.22 E-value=4.1e-07 Score=77.62 Aligned_cols=51 Identities=10% Similarity=-0.035 Sum_probs=43.5
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQ 129 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~ 129 (332)
+++++||.|+++||+.|+.+.|.|.+++..++.+.|+.++.+..+-++.+.
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~ 103 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQR 103 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHH
Confidence 457899999999999999999999999999998999999887665544443
No 336
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.21 E-value=5.7e-07 Score=78.73 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=39.8
Q ss_pred CCcEEEEEecCCChhhHHHHHHH---HHHHHHcCC-ceEEEEECcCC
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHM---KTLCKKHLE-TRFIKLNVERA 192 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l---~~La~~~~~-v~f~kVd~~~~ 192 (332)
.+++||.||++|||+|+.+.|.| +++++++++ ++|.+++++.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 57899999999999999999999 999999986 99999999865
No 337
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.20 E-value=7.2e-06 Score=68.76 Aligned_cols=74 Identities=11% Similarity=0.010 Sum_probs=59.6
Q ss_pred cCCcEEEEEe-cCCChhhH-HHHHHHHHHHHHcC--Cce-EEEEECcC-----------------------ChHHHHhCC
Q psy6451 149 KSPNMVVHFY-KDGSVNCK-ILDEHMKTLCKKHL--ETR-FIKLNVER-----------------------APFLTERLR 200 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck-~l~~~l~~La~~~~--~v~-f~kVd~~~-----------------------~~~l~~~~~ 200 (332)
++++|||.|| ++||++|. ...|.|.++..+|. ++. ++-|..+. ...+++.|+
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALG 113 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcC
Confidence 5678999999 89999999 89999999988874 477 88777652 123677788
Q ss_pred cc-----------cCcEEEEEeCCeeeeeEecc
Q psy6451 201 IK-----------VIPTLTLVKDSVTKDYIVGF 222 (332)
Q Consensus 201 I~-----------~~PTl~~~~~G~~v~~~~G~ 222 (332)
+. .+|+.+++.+|+++...+|.
T Consensus 114 v~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 114 LELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp CEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred cccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 86 27998888899999988886
No 338
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.19 E-value=4e-06 Score=70.98 Aligned_cols=75 Identities=13% Similarity=0.203 Sum_probs=57.2
Q ss_pred cCCcEEEEEecCCCh-hhHHHHHHHHHHHHHcC----CceEEEEECcC--C-----------------------------
Q psy6451 149 KSPNMVVHFYKDGSV-NCKILDEHMKTLCKKHL----ETRFIKLNVER--A----------------------------- 192 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~-~Ck~l~~~l~~La~~~~----~v~f~kVd~~~--~----------------------------- 192 (332)
+++++||.||++||+ .|....+.|.++.+++. ++.++.|.++. .
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 378999999999997 69999999999999884 37777777641 1
Q ss_pred hHHHHhCC---------cccCcEEEEE-eCCeeeeeEeccc
Q psy6451 193 PFLTERLR---------IKVIPTLTLV-KDSVTKDYIVGFT 223 (332)
Q Consensus 193 ~~l~~~~~---------I~~~PTl~~~-~~G~~v~~~~G~~ 223 (332)
..+++.|+ +...|+++++ ++|+++..+.|..
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~ 147 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVN 147 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSS
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCC
Confidence 12455544 3456877777 6999999988863
No 339
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.19 E-value=6.5e-07 Score=75.75 Aligned_cols=84 Identities=12% Similarity=0.132 Sum_probs=63.9
Q ss_pred HHHHhccCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCC---------------------hHHHHh
Q psy6451 143 FFDLCKKSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERA---------------------PFLTER 198 (332)
Q Consensus 143 ~~~~~~~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~---------------------~~l~~~ 198 (332)
+.+...++++||+.|| ++||++|....|.|.++..+|.. +.++.|..+.. ..+++.
T Consensus 26 Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 105 (164)
T 4gqc_A 26 LYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKL 105 (164)
T ss_dssp HHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHH
T ss_pred HHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHH
Confidence 3455567899999998 99999999988888888888754 88888876632 246777
Q ss_pred CCcc----------cCcEEEEE-eCCeeeeeEecccCcc
Q psy6451 199 LRIK----------VIPTLTLV-KDSVTKDYIVGFTELG 226 (332)
Q Consensus 199 ~~I~----------~~PTl~~~-~~G~~v~~~~G~~~~~ 226 (332)
||+. ..|+++++ ++|+++...++....+
T Consensus 106 ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~ 144 (164)
T 4gqc_A 106 YNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLN 144 (164)
T ss_dssp TTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTC
T ss_pred cCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCC
Confidence 8874 36887777 6999998887765443
No 340
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.19 E-value=4e-06 Score=61.64 Aligned_cols=56 Identities=14% Similarity=0.230 Sum_probs=44.5
Q ss_pred EEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChH----HHHhCCcccCcEEEEEeCCeee
Q psy6451 154 VVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPF----LTERLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 154 vV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~----l~~~~~I~~~PTl~~~~~G~~v 216 (332)
|+.|+++||++|+.+.+.|+++ ++.|..+|++..+. +.+.+++.++|+++ .+|+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i 62 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-----GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI 62 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHC-----CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE
Confidence 5678999999999999988865 46777888877544 45678999999984 488754
No 341
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.16 E-value=3.1e-06 Score=63.99 Aligned_cols=59 Identities=14% Similarity=0.191 Sum_probs=44.5
Q ss_pred EEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECc-----CC----hHHHHhCCcccCcEEEEEeCCeeeeeEecc
Q psy6451 154 VVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE-----RA----PFLTERLRIKVIPTLTLVKDSVTKDYIVGF 222 (332)
Q Consensus 154 vV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~-----~~----~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~ 222 (332)
|+.|++|||++|+.+.+.|+++. +.|-.++++ .. +.+.+.+++..+|++++ +|+. +.|+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g-----i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~---i~G~ 81 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG-----VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH---VLGY 81 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT-----CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE---EESC
T ss_pred EEEEECCCChHHHHHHHHHHHcC-----CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE---EeCC
Confidence 66789999999999999888764 444556665 22 56777899999999987 8854 4454
No 342
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.15 E-value=7.1e-06 Score=70.91 Aligned_cols=74 Identities=12% Similarity=0.061 Sum_probs=56.8
Q ss_pred CCc-EEEEEecCCChhhHH-HHHHHHHHHHHcC--Cce-EEEEECcCC-----------------------hHHHHhCCc
Q psy6451 150 SPN-MVVHFYKDGSVNCKI-LDEHMKTLCKKHL--ETR-FIKLNVERA-----------------------PFLTERLRI 201 (332)
Q Consensus 150 ~~~-VvV~Fya~wc~~Ck~-l~~~l~~La~~~~--~v~-f~kVd~~~~-----------------------~~l~~~~~I 201 (332)
+++ ||+.||++||++|.. -.|.|.+++.+|. ++. ++-|+.+.. ..+++.|++
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv 135 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGM 135 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcCC
Confidence 454 455566999999999 7999999999884 477 888887641 236777888
Q ss_pred c-----------cCcEEEEEeCCeeeeeEeccc
Q psy6451 202 K-----------VIPTLTLVKDSVTKDYIVGFT 223 (332)
Q Consensus 202 ~-----------~~PTl~~~~~G~~v~~~~G~~ 223 (332)
. ..|+.+++.+|+++...+|..
T Consensus 136 ~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~ 168 (184)
T 3uma_A 136 EIDLSAGTLGIRSKRYSMLVEDGVVKALNIEES 168 (184)
T ss_dssp EEEEGGGTCEEEECCEEEEEETTEEEEEEECSS
T ss_pred ceeccccCCcccceeEEEEECCCEEEEEEEeCC
Confidence 5 357777779999999998864
No 343
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.14 E-value=8.4e-06 Score=68.69 Aligned_cols=73 Identities=5% Similarity=0.032 Sum_probs=57.1
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC-----------------------hHHHHhCCccc-
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA-----------------------PFLTERLRIKV- 203 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~-----------------------~~l~~~~~I~~- 203 (332)
+++++||.|| ++||++|....|.|.++..+|.++.++-|..+.. ..+ +.|++..
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~ 124 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLIG 124 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBBC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHcCCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEec
Confidence 4679999999 8999999999999999998886688887776531 123 5566542
Q ss_pred --------CcEEEEEe-CCeeeeeEecc
Q psy6451 204 --------IPTLTLVK-DSVTKDYIVGF 222 (332)
Q Consensus 204 --------~PTl~~~~-~G~~v~~~~G~ 222 (332)
.|+++++. +|+++..+.|.
T Consensus 125 ~~~~~g~~~p~~~liD~~G~i~~~~~~~ 152 (171)
T 2yzh_A 125 EGALKGILARAVFIIDKEGKVAYVQLVP 152 (171)
T ss_dssp SSTTTTSBCCEEEEECTTSBEEEEEECS
T ss_pred ccccCCceeeEEEEEcCCCeEEEEEeCC
Confidence 68888884 99999998864
No 344
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.14 E-value=8.5e-06 Score=71.10 Aligned_cols=74 Identities=5% Similarity=0.029 Sum_probs=60.1
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCCceEEEEECcC-----------------------ChHHHHhCCcc--
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLETRFIKLNVER-----------------------APFLTERLRIK-- 202 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~-----------------------~~~l~~~~~I~-- 202 (332)
++++|||.|| +.||++|....|.|.++..+|.++.++.|..+. ...++..|++.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~~ 156 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGELENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAIT 156 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCEEC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhCceee
Confidence 4688999999 789999999999999999999668888887653 22456677775
Q ss_pred -------cCcEEEEE-eCCeeeeeEecc
Q psy6451 203 -------VIPTLTLV-KDSVTKDYIVGF 222 (332)
Q Consensus 203 -------~~PTl~~~-~~G~~v~~~~G~ 222 (332)
..|+++++ ++|+++....+.
T Consensus 157 ~~~~~g~~~p~~~lID~~G~I~~~~~~~ 184 (200)
T 3zrd_A 157 EGPLAGLTARAVVVLDGQDNVIYSELVN 184 (200)
T ss_dssp SSTTTTSBCCEEEEECTTSBEEEEEECS
T ss_pred cccCCCccccEEEEECCCCeEEEEEecC
Confidence 36999988 699999888765
No 345
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.13 E-value=8.9e-06 Score=68.26 Aligned_cols=74 Identities=7% Similarity=0.035 Sum_probs=59.3
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCCceEEEEECcC-----------------------ChHHHHhCCccc-
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLETRFIKLNVER-----------------------APFLTERLRIKV- 203 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~-----------------------~~~l~~~~~I~~- 203 (332)
+++++||.|| +.||++|....|.|.++..+ .++.++.|..+. ...++..|++..
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~ 123 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVME 123 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEET
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccc
Confidence 4688999999 78999999999999999877 668888777653 124566788875
Q ss_pred -----CcEEEEE-eCCeeeeeEeccc
Q psy6451 204 -----IPTLTLV-KDSVTKDYIVGFT 223 (332)
Q Consensus 204 -----~PTl~~~-~~G~~v~~~~G~~ 223 (332)
+|+++++ ++|+++....+..
T Consensus 124 ~~g~~~p~~~liD~~G~i~~~~~~~~ 149 (166)
T 3p7x_A 124 ELRLLARAVFVLDADNKVVYKEIVSE 149 (166)
T ss_dssp TTTEECCEEEEECTTCBEEEEEECSB
T ss_pred cCCceeeEEEEECCCCeEEEEEEcCC
Confidence 8999988 5999999877653
No 346
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.12 E-value=9.6e-06 Score=71.96 Aligned_cols=76 Identities=13% Similarity=0.058 Sum_probs=66.1
Q ss_pred CcccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHHhCCcccCcEEEEEe
Q psy6451 132 GEYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 132 g~~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~ 211 (332)
...+++.+.+++.+.+.++..+||-||++| |..+.+.|.++|..+..+.|+.+ ..+.++++|++.+ |||++|+
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~~~~F~~t---~~~~v~~~~~v~~-p~i~lfk 81 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKFPGVSFGIS---TDSEVLTHYNITG-NTICLFR 81 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTCTTSEEEEE---CCHHHHHHTTCCS-SEEEEEE
T ss_pred CCCeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhCCCceEEEE---CCHHHHHHcCCCC-CeEEEEE
Confidence 457889999999999999999999999998 56789999999999977888874 4678899999998 9999999
Q ss_pred CCe
Q psy6451 212 DSV 214 (332)
Q Consensus 212 ~G~ 214 (332)
.+.
T Consensus 82 ~~~ 84 (227)
T 4f9z_D 82 LVD 84 (227)
T ss_dssp TTT
T ss_pred ecC
Confidence 753
No 347
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.12 E-value=2.4e-06 Score=77.20 Aligned_cols=71 Identities=13% Similarity=0.126 Sum_probs=57.0
Q ss_pred cceEecCCchhhhhhhcCCCcEEEEEcc--CCChhhhhhHHHHHHHHHhh---hhceeeecccC-----CCCcccccCCC
Q psy6451 62 GEYEEIPDEKKFFDLCKKSPNMVVHFYK--DGSVNCKILDEHMKTLCKKH---LETRFIKLNVE-----RAPFLTGQQGH 131 (332)
Q Consensus 62 G~~~ev~~e~~f~~~~~~~~~vvVhFy~--p~~~~Ck~~~~~l~~LA~~~---~~~~f~kvd~~-----k~pfl~~k~g~ 131 (332)
..|.+++ +.+|.++++++.+|||.||+ |||+ |.|.|.++|..+ +.+.|+++|+. ..+-++.+.+.
T Consensus 5 ~~v~~Lt-~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLD-TVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECC-TTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECC-HHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 4577885 57999999888899999999 9999 999999999997 46899999954 35666666666
Q ss_pred C--ccccc
Q psy6451 132 G--EYEEI 137 (332)
Q Consensus 132 g--~~~ei 137 (332)
. .|+++
T Consensus 80 ~~~~~PTl 87 (240)
T 2qc7_A 80 DKESYPVF 87 (240)
T ss_dssp CGGGCSEE
T ss_pred CCCCCCEE
Confidence 5 55544
No 348
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.10 E-value=0.00011 Score=66.17 Aligned_cols=143 Identities=12% Similarity=0.172 Sum_probs=95.3
Q ss_pred ceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhh-hhceeeecccCC--------CCccc-c-----
Q psy6451 63 EYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LETRFIKLNVER--------APFLT-G----- 127 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~-~~~~f~kvd~~k--------~pfl~-~----- 127 (332)
.+.+|++.+++..+++.++.+||-||.++ |......|..+|..+ ..+.|..+.-.. .|.++ -
T Consensus 7 ~v~~l~s~~~~~~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~~~~~~p~i~~fk~~~~ 83 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNGEGIILFRPSHL 83 (252)
T ss_dssp CEEECCSHHHHHHHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEECCHHHHHHHCSSSEEEEEECCGGG
T ss_pred CceeecCHHHHHHHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEChHHHHHHhCCCCCcEEEEcchhh
Confidence 37889888899998988889999999997 566778899999987 556664432110 12111 0
Q ss_pred --cCC-------CCc-----------------ccccCChhHHHHHhccCCcEEEEEecCCChhh----HHHHHHHHHHHH
Q psy6451 128 --QQG-------HGE-----------------YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNC----KILDEHMKTLCK 177 (332)
Q Consensus 128 --k~g-------~g~-----------------~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~C----k~l~~~l~~La~ 177 (332)
+.. .|. +.+++.+. +... .+.+++|.|+.+.+..+ ..+...+.++|+
T Consensus 84 ~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n-~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~ 160 (252)
T 2h8l_A 84 TNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDN-KDLI--QGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAK 160 (252)
T ss_dssp CCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTT-HHHH--SSSSEEEEEECCBTTTBHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCcCHHHHHHHHHhcccCCeeeccccc-Hhhh--cCCCeEEEEeecchhhcchhHHHHHHHHHHHHH
Confidence 000 111 22222222 2222 23466777776544222 246777888999
Q ss_pred HcCC----ceEEEEECcCChHHHHhCCc----ccCcEEEEEe
Q psy6451 178 KHLE----TRFIKLNVERAPFLTERLRI----KVIPTLTLVK 211 (332)
Q Consensus 178 ~~~~----v~f~kVd~~~~~~l~~~~~I----~~~PTl~~~~ 211 (332)
+|.+ +.|+.+|++..+.+.+.||+ ..+|++.++.
T Consensus 161 ~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~ 202 (252)
T 2h8l_A 161 KFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRT 202 (252)
T ss_dssp HHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEEC
T ss_pred HccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEe
Confidence 8853 99999999999989999999 3699999985
No 349
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.09 E-value=1.3e-06 Score=73.85 Aligned_cols=55 Identities=16% Similarity=0.149 Sum_probs=44.8
Q ss_pred chhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccCCCCc
Q psy6451 70 EKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVERAPF 124 (332)
Q Consensus 70 e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~k~pf 124 (332)
++.|..+..+++++||.||++||+.|+.+.|.|.+++..+. .+.|+.++++..+.
T Consensus 36 ~~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~ 91 (164)
T 1sen_A 36 EDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEE 91 (164)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGS
T ss_pred HHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCch
Confidence 35666667778999999999999999999999999887664 47888888765543
No 350
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=97.37 E-value=4.2e-07 Score=72.94 Aligned_cols=66 Identities=8% Similarity=0.042 Sum_probs=49.7
Q ss_pred hhhhhhhcCCCcEEEEEccCCChhhhhhHHHH---HHHHHhhhh-ceeeecccC--CCCcccccCCCCcccc
Q psy6451 71 KKFFDLCKKSPNMVVHFYKDGSVNCKILDEHM---KTLCKKHLE-TRFIKLNVE--RAPFLTGQQGHGEYEE 136 (332)
Q Consensus 71 ~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l---~~LA~~~~~-~~f~kvd~~--k~pfl~~k~g~g~~~e 136 (332)
+.+.....+++++||.||++||++|+.+.+.+ ..++..+.. +.|+.+++. ..+.++...+...+++
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt 81 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPT 81 (130)
Confidence 34455556678899999999999999999999 888888765 788888883 4455555555555444
No 351
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.08 E-value=8.1e-06 Score=69.40 Aligned_cols=75 Identities=12% Similarity=0.040 Sum_probs=55.3
Q ss_pred cCCcEEEEEecCCChhhHHH-HHHHHHHHHHcC--Cce-EEEEECcCC-----------------------hHHHHhCCc
Q psy6451 149 KSPNMVVHFYKDGSVNCKIL-DEHMKTLCKKHL--ETR-FIKLNVERA-----------------------PFLTERLRI 201 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l-~~~l~~La~~~~--~v~-f~kVd~~~~-----------------------~~l~~~~~I 201 (332)
..+.||+.||++||++|... .|.|.++..+|. ++. ++-|+.+.. ..++..|++
T Consensus 43 gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 122 (171)
T 2pwj_A 43 DKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLEL 122 (171)
T ss_dssp TSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTC
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCC
Confidence 33567788999999999998 999999988874 577 888876531 135556676
Q ss_pred cc-----------Cc-EEEEEeCCeeeeeEecccC
Q psy6451 202 KV-----------IP-TLTLVKDSVTKDYIVGFTE 224 (332)
Q Consensus 202 ~~-----------~P-Tl~~~~~G~~v~~~~G~~~ 224 (332)
.. .| |+++- +|+++...+|..+
T Consensus 123 ~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~~~~~ 156 (171)
T 2pwj_A 123 TTDLSAGLLGIRSERWSAYVV-DGKVKALNVEESP 156 (171)
T ss_dssp EEECTTTTCCEEECCEEEEEE-TTEEEEEEECSST
T ss_pred ccccccccCCcccceeEEEEE-CCEEEEEEeecCC
Confidence 52 33 55555 9999999888654
No 352
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.05 E-value=7.1e-06 Score=70.60 Aligned_cols=41 Identities=20% Similarity=0.201 Sum_probs=34.7
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEEC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNV 189 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~ 189 (332)
.++++|+.||.+|||+|+.+.|.+.++.++++. +.|..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 357889999999999999999999999999875 66665553
No 353
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.05 E-value=4.2e-07 Score=71.54 Aligned_cols=53 Identities=8% Similarity=0.010 Sum_probs=37.5
Q ss_pred CcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC----CCCcccccCCCCcccc
Q psy6451 81 PNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE----RAPFLTGQQGHGEYEE 136 (332)
Q Consensus 81 ~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~----k~pfl~~k~g~g~~~e 136 (332)
+.+||.||+|||++|+.+.|.|.++|..+. ++.++.. ..+-++.+.|...+++
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---~v~~~~~~~~~~~~~l~~~~~V~~~PT 69 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGITSYPT 69 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCTTCTTSCCCHHHHHTTCCSSSE
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC---EEEEecccccchhHHHHHHcCCeEeCE
Confidence 456899999999999999999999997765 4444422 3444555555555444
No 354
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.04 E-value=9.9e-06 Score=73.62 Aligned_cols=78 Identities=12% Similarity=0.205 Sum_probs=62.4
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcCC----------------------------hHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERA----------------------------PFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~~----------------------------~~l~~ 197 (332)
++++|||.|| +.||++|....|.|.+++.+|. ++.++-|.++.. ..++.
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 4689999999 9999999999999999999985 478887776531 24677
Q ss_pred hCCcc------cCcEEEEE-eCCeeeeeEecccCcc
Q psy6451 198 RLRIK------VIPTLTLV-KDSVTKDYIVGFTELG 226 (332)
Q Consensus 198 ~~~I~------~~PTl~~~-~~G~~v~~~~G~~~~~ 226 (332)
.|++. .+|+++++ ++|+++....+....+
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~ 205 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVG 205 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCC
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCC
Confidence 78885 58998888 5999999988765544
No 355
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.03 E-value=1.3e-05 Score=68.54 Aligned_cols=78 Identities=13% Similarity=0.060 Sum_probs=57.4
Q ss_pred cCCcEEEEEe-cCCChhhHH-HHHHHHHHHHHcCC--ceEEE-EECcC-----------------------ChHHHHhCC
Q psy6451 149 KSPNMVVHFY-KDGSVNCKI-LDEHMKTLCKKHLE--TRFIK-LNVER-----------------------APFLTERLR 200 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~-l~~~l~~La~~~~~--v~f~k-Vd~~~-----------------------~~~l~~~~~ 200 (332)
++++||+.|| ++||++|.. -.|.|.+++.+|.. +.++- |..+. ...+++.||
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 121 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETD 121 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHHhC
Confidence 4565665554 999999994 88999999988753 66664 65543 124677788
Q ss_pred cc-------------cCcEEEEEeCCeeeeeEecccCcc
Q psy6451 201 IK-------------VIPTLTLVKDSVTKDYIVGFTELG 226 (332)
Q Consensus 201 I~-------------~~PTl~~~~~G~~v~~~~G~~~~~ 226 (332)
+. ..|+.+++.+|+++...++....+
T Consensus 122 v~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g 160 (173)
T 3mng_A 122 LLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTG 160 (173)
T ss_dssp CBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSC
T ss_pred CCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCC
Confidence 75 459988888999999998876543
No 356
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.03 E-value=4e-05 Score=65.57 Aligned_cols=40 Identities=15% Similarity=0.292 Sum_probs=34.1
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEEC
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNV 189 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~ 189 (332)
.+.+|+.|+.+|||+|..+.|.+..+.++|++ +.|..+.+
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 46689999999999999999999999999876 66665554
No 357
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=98.02 E-value=1.2e-05 Score=63.76 Aligned_cols=68 Identities=19% Similarity=0.317 Sum_probs=47.8
Q ss_pred hHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC-------hHHHHhCCcccCcEEEEEeCC
Q psy6451 141 KKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA-------PFLTERLRIKVIPTLTLVKDS 213 (332)
Q Consensus 141 ~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~-------~~l~~~~~I~~~PTl~~~~~G 213 (332)
..+.+.+++++ |+| |++||||.|+.+.+.|..+ ++.|..++++.. ..+.+..+...+|++++ +|
T Consensus 8 ~~~~~~i~~~~-v~v-y~~~~Cp~C~~ak~~L~~~-----~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~g 78 (114)
T 3h8q_A 8 RHLVGLIERSR-VVI-FSKSYCPHSTRVKELFSSL-----GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--NK 78 (114)
T ss_dssp HHHHHHHHHCS-EEE-EECTTCHHHHHHHHHHHHT-----TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--TT
T ss_pred HHHHHHhccCC-EEE-EEcCCCCcHHHHHHHHHHc-----CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--CC
Confidence 34455554444 333 9999999999999888875 456777777753 23556778999999855 88
Q ss_pred eeee
Q psy6451 214 VTKD 217 (332)
Q Consensus 214 ~~v~ 217 (332)
+.+.
T Consensus 79 ~~ig 82 (114)
T 3h8q_A 79 VHVG 82 (114)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7553
No 358
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.00 E-value=4.3e-06 Score=70.10 Aligned_cols=50 Identities=16% Similarity=0.163 Sum_probs=37.7
Q ss_pred hhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHh--hhhceeeecccC
Q psy6451 71 KKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKK--HLETRFIKLNVE 120 (332)
Q Consensus 71 ~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~--~~~~~f~kvd~~ 120 (332)
+.+..+..++++|||.||++||+.|+.|.+.+...+.. +....|+.++++
T Consensus 35 ~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD 86 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM 86 (151)
T ss_dssp HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec
Confidence 34444556789999999999999999999999876432 334567777664
No 359
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.00 E-value=4.9e-05 Score=64.33 Aligned_cols=89 Identities=13% Similarity=0.209 Sum_probs=58.5
Q ss_pred cCCcEEEEEecCCCh-hhHHHHHHHHHHHHHcC----CceEEEEECcC---ChH----HHHhCC----------------
Q psy6451 149 KSPNMVVHFYKDGSV-NCKILDEHMKTLCKKHL----ETRFIKLNVER---APF----LTERLR---------------- 200 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~-~Ck~l~~~l~~La~~~~----~v~f~kVd~~~---~~~----l~~~~~---------------- 200 (332)
++++|||.||.+||+ .|....+.|..+.+.+. .+.|+.|.++- .|+ .+++|+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~ 110 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLED 110 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecCcccHHH
Confidence 689999999999996 79999988888776652 37777776642 221 122222
Q ss_pred --------------------cccCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHH
Q psy6451 201 --------------------IKVIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWR 239 (332)
Q Consensus 201 --------------------I~~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~ 239 (332)
+...|+++++ ++|+++..+.|..... . +-+.+.|+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~-~-~~l~~~ik~L 168 (170)
T 4hde_A 111 ITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTP-Y-EDIIRDMKRL 168 (170)
T ss_dssp HHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCC-H-HHHHHHHHHH
T ss_pred HHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCC-H-HHHHHHHHHH
Confidence 2223677776 6999999998875543 1 2334445543
No 360
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.99 E-value=8.9e-06 Score=60.60 Aligned_cols=61 Identities=8% Similarity=0.042 Sum_probs=44.1
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC----hHHHHhCCc-----ccCcEEEEEeCCeeee
Q psy6451 152 NMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA----PFLTERLRI-----KVIPTLTLVKDSVTKD 217 (332)
Q Consensus 152 ~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~----~~l~~~~~I-----~~~PTl~~~~~G~~v~ 217 (332)
..|+.|+++||++|+.+.+.|..+. ....++.||.... +.+.+.++. .++|++++ +|+.+.
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~---i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i~ 73 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN---IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHIG 73 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT---CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEEE
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC---CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEEe
Confidence 4478899999999999998887653 2245555565544 457777888 99999854 887553
No 361
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.97 E-value=1.7e-05 Score=66.14 Aligned_cols=72 Identities=15% Similarity=0.241 Sum_probs=53.3
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcC-------------------------------------
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVER------------------------------------- 191 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~------------------------------------- 191 (332)
.++.+|+.|+.++||+|+.+.+.+.++ ..++++....--
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~~ 88 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGG 88 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCcc
Confidence 457889999999999999999988654 455554433210
Q ss_pred ---------ChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchh
Q psy6451 192 ---------APFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNC 228 (332)
Q Consensus 192 ---------~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~ 228 (332)
+..++..++|+++||+++ .||+ .+.|..+...+
T Consensus 89 ~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~~~~~~l 130 (147)
T 3gv1_A 89 SICDNPVAETTSLGEQFGFNGTPTLVF-PNGR---TQSGYSPMPQL 130 (147)
T ss_dssp CCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC---EEESCCCTTHH
T ss_pred HHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE---EeeCCCCHHHH
Confidence 134677899999999998 7887 46787776554
No 362
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.97 E-value=2.7e-05 Score=65.79 Aligned_cols=41 Identities=22% Similarity=0.343 Sum_probs=35.4
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHHHHcCC-ceEEEEEC
Q psy6451 149 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNV 189 (332)
Q Consensus 149 ~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~ 189 (332)
.+.++||.|+.-.||+|+.+.|.+..+.++++. ++|..+..
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~ 61 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHV 61 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEEC
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEec
Confidence 467899999999999999999999999999987 66666554
No 363
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.95 E-value=3.5e-06 Score=67.31 Aligned_cols=66 Identities=17% Similarity=0.198 Sum_probs=46.9
Q ss_pred chhhhhhh----cCCCcEEEEEccCCChhhhhhHHHH---HHHHHhh-hhceeeecccCC--CCcccccCCCCccc
Q psy6451 70 EKKFFDLC----KKSPNMVVHFYKDGSVNCKILDEHM---KTLCKKH-LETRFIKLNVER--APFLTGQQGHGEYE 135 (332)
Q Consensus 70 e~~f~~~~----~~~~~vvVhFy~p~~~~Ck~~~~~l---~~LA~~~-~~~~f~kvd~~k--~pfl~~k~g~g~~~ 135 (332)
+.+|.+.+ .+++++||.||++||+.|+.+.+.+ ..++..+ ..+.++.+++.. .+.++...+...++
T Consensus 13 ~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~P 88 (130)
T 2kuc_A 13 ELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYP 88 (130)
T ss_dssp CCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSC
T ss_pred cCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCC
Confidence 45666666 3578999999999999999999999 6777665 357788888763 33444444444433
No 364
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.95 E-value=6e-06 Score=67.28 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=50.4
Q ss_pred hhHHHHHhccCCcEEEEEecCCChhhHHH-HHHHHHHHHHcCCceEEEEECcCC-------hHHHHhCCcccCcEEEEEe
Q psy6451 140 EKKFFDLCKKSPNMVVHFYKDGSVNCKIL-DEHMKTLCKKHLETRFIKLNVERA-------PFLTERLRIKVIPTLTLVK 211 (332)
Q Consensus 140 e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l-~~~l~~La~~~~~v~f~kVd~~~~-------~~l~~~~~I~~~PTl~~~~ 211 (332)
.+.+.+.+...+ |+.|++||||+|+.+ .+.|..+... .+.|..++++.. ..+.+.++...+|++ |.
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~--~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi 100 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVP--KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YI 100 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCC--GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCcc--CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EE
Confidence 345555565554 677899999999999 8887765422 155666666654 357888999999996 67
Q ss_pred CCeee
Q psy6451 212 DSVTK 216 (332)
Q Consensus 212 ~G~~v 216 (332)
+|+.+
T Consensus 101 ~g~~i 105 (129)
T 3ctg_A 101 NGKHI 105 (129)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88765
No 365
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.95 E-value=1.8e-05 Score=66.82 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=33.5
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHHHHHc--CC-ceEEEEEC
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHMKTLCKKH--LE-TRFIKLNV 189 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~--~~-v~f~kVd~ 189 (332)
.+.+|+.|+.+|||+|+.+.+.+..+.++| ++ ++|+....
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 567899999999999999999999998888 55 77766553
No 366
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.95 E-value=2.1e-05 Score=61.02 Aligned_cols=54 Identities=19% Similarity=0.146 Sum_probs=39.2
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC-----hHH----HHhCCcccCcEEEE
Q psy6451 151 PNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA-----PFL----TERLRIKVIPTLTL 209 (332)
Q Consensus 151 ~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~-----~~l----~~~~~I~~~PTl~~ 209 (332)
..-|+.|+++|||+|+.+.+.|+++. +.|-.++++.. +.+ ...+++.++|++++
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~-----i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i 83 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG-----VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII 83 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT-----BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC-----CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE
Confidence 34567799999999999999998764 44555666642 222 23479999999876
No 367
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.91 E-value=9.4e-05 Score=65.69 Aligned_cols=74 Identities=14% Similarity=0.100 Sum_probs=57.1
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcCC-------------------------------hHHHHh
Q psy6451 152 NMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERA-------------------------------PFLTER 198 (332)
Q Consensus 152 ~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~~-------------------------------~~l~~~ 198 (332)
.||+.||++||++|....+.|.+++.+|.. +.++.|.++.. ..++..
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 566667899999999999999999998854 77877776531 235667
Q ss_pred CCcc------------cCcEEEEE-eCCeeeeeEecccCc
Q psy6451 199 LRIK------------VIPTLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 199 ~~I~------------~~PTl~~~-~~G~~v~~~~G~~~~ 225 (332)
|++. .+|+++++ ++|+++..+.|....
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~ 153 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATT 153 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTB
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCC
Confidence 8873 47999988 589999999876443
No 368
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.89 E-value=3.6e-06 Score=72.22 Aligned_cols=57 Identities=14% Similarity=0.135 Sum_probs=44.5
Q ss_pred chhhhhhhcCCCcEEEEEccCCChhhhhhHHH---HHHHHHhhh-hceeeecccCCCCccc
Q psy6451 70 EKKFFDLCKKSPNMVVHFYKDGSVNCKILDEH---MKTLCKKHL-ETRFIKLNVERAPFLT 126 (332)
Q Consensus 70 e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~---l~~LA~~~~-~~~f~kvd~~k~pfl~ 126 (332)
++.|..+...+++|+|+||++||+.|+.|.+. ..+++..+- ...++++|.++.+-+.
T Consensus 29 ~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~ 89 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDID 89 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHH
T ss_pred HHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHH
Confidence 66788888889999999999999999999983 245555543 5778999988665443
No 369
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.88 E-value=6e-06 Score=59.73 Aligned_cols=36 Identities=25% Similarity=0.588 Sum_probs=32.1
Q ss_pred EEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecc
Q psy6451 83 MVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLN 118 (332)
Q Consensus 83 vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd 118 (332)
+.|.||++||++|+.+.+.|.+++..+. .+.+++++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~ 38 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK 38 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec
Confidence 4689999999999999999999999886 57788876
No 370
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.86 E-value=1.4e-05 Score=63.74 Aligned_cols=43 Identities=9% Similarity=0.218 Sum_probs=39.4
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVER 121 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k 121 (332)
+++++||.||++||++|+.+.+.|.+++..++++.|+.++...
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~ 65 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRA 65 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEEcCC
Confidence 4678999999999999999999999999999988898888765
No 371
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.84 E-value=5.3e-05 Score=59.44 Aligned_cols=66 Identities=14% Similarity=0.091 Sum_probs=48.4
Q ss_pred HHHHHhccCCcEEEEEec-----CCChhhHHHHHHHHHHHHHcCCceEEEEECcCChH----HHHhCCcccCcEEEEEeC
Q psy6451 142 KFFDLCKKSPNMVVHFYK-----DGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPF----LTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 142 ~~~~~~~~~~~VvV~Fya-----~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~----l~~~~~I~~~PTl~~~~~ 212 (332)
.+.+.+++++ |+| |+. |||++|+.+.+.|..+ ++.|..+|++..+. +.+.++...+|++ |.+
T Consensus 7 ~~~~~i~~~~-vvv-y~~g~~~~~~Cp~C~~ak~~L~~~-----~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i--fi~ 77 (109)
T 1wik_A 7 GLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST-----GVEYETFDILEDEEVRQGLKTFSNWPTYPQL--YVR 77 (109)
T ss_dssp CHHHHHTTSS-EEE-EESSTTTCCCSSTHHHHHHHHHHT-----CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE--ECS
T ss_pred HHHHHhccCC-EEE-EEecCCCCCCCchHHHHHHHHHHc-----CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE--EEC
Confidence 3455565544 444 666 9999999999888764 57899999998875 4445688899984 678
Q ss_pred Ceee
Q psy6451 213 SVTK 216 (332)
Q Consensus 213 G~~v 216 (332)
|+.+
T Consensus 78 g~~i 81 (109)
T 1wik_A 78 GDLV 81 (109)
T ss_dssp SSEE
T ss_pred CEEE
Confidence 8754
No 372
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.79 E-value=0.00011 Score=65.82 Aligned_cols=76 Identities=13% Similarity=0.020 Sum_probs=58.9
Q ss_pred CCcEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcCC-----------------------------hHHHH
Q psy6451 150 SPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERA-----------------------------PFLTE 197 (332)
Q Consensus 150 ~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~~-----------------------------~~l~~ 197 (332)
.+++|+.|| ++||+.|....+.|.++..+|. ++.++.|.++.. ..++.
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 348999998 9999999999999999988874 477777765421 23566
Q ss_pred hCCcc------------cCcEEEEE-eCCeeeeeEecccCc
Q psy6451 198 RLRIK------------VIPTLTLV-KDSVTKDYIVGFTEL 225 (332)
Q Consensus 198 ~~~I~------------~~PTl~~~-~~G~~v~~~~G~~~~ 225 (332)
.|++. .+|+++++ ++|+++..+.|....
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~ 149 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATT 149 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTB
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCC
Confidence 78874 58999888 599999998876443
No 373
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.77 E-value=1.6e-05 Score=66.16 Aligned_cols=46 Identities=7% Similarity=0.216 Sum_probs=38.8
Q ss_pred cCCCcEEEEEc-cCCChhhhhhHHHH---HHHHHhh-hhceeeecccCCCC
Q psy6451 78 KKSPNMVVHFY-KDGSVNCKILDEHM---KTLCKKH-LETRFIKLNVERAP 123 (332)
Q Consensus 78 ~~~~~vvVhFy-~p~~~~Ck~~~~~l---~~LA~~~-~~~~f~kvd~~k~p 123 (332)
.+++++||.|| ++||+.|+.+.+.| .+++..+ ..+.++.++....+
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~ 95 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKN 95 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSC
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCcccc
Confidence 45789999999 99999999999999 7777665 56888999887654
No 374
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.75 E-value=1.9e-05 Score=66.51 Aligned_cols=54 Identities=15% Similarity=0.210 Sum_probs=39.2
Q ss_pred chhhhhhh----cCCCcEEEEEccCCChhhhhhHHHH---HHHHHhhh-hceeeecccCCCC
Q psy6451 70 EKKFFDLC----KKSPNMVVHFYKDGSVNCKILDEHM---KTLCKKHL-ETRFIKLNVERAP 123 (332)
Q Consensus 70 e~~f~~~~----~~~~~vvVhFy~p~~~~Ck~~~~~l---~~LA~~~~-~~~f~kvd~~k~p 123 (332)
..+|.+.+ .++++|||+||++||++|+.|.+.+ ..++..+. ++.|+.++.+...
T Consensus 33 ~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~ 94 (172)
T 3f9u_A 33 FDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKT 94 (172)
T ss_dssp BSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCC
T ss_pred hhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCccc
Confidence 34555555 6688999999999999999985444 44444443 5888888887654
No 375
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.75 E-value=0.00011 Score=63.47 Aligned_cols=41 Identities=27% Similarity=0.382 Sum_probs=35.7
Q ss_pred CCcEEEEEecCCChhhHHHHHHH---HHHHHHcCC-ceEEEEECc
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHM---KTLCKKHLE-TRFIKLNVE 190 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l---~~La~~~~~-v~f~kVd~~ 190 (332)
++++||.|+..|||+|+.+.|.+ ..+.+++++ ++|+.++..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 47899999999999999999987 699999985 888877754
No 376
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.74 E-value=0.00085 Score=60.19 Aligned_cols=144 Identities=11% Similarity=0.020 Sum_probs=96.0
Q ss_pred ceEecCCchhhhhhhcC-CCcEEEEEccCCChhhhhhHHHHHHHHHhh-hhceeeecccC--------CCCccc-cc---
Q psy6451 63 EYEEIPDEKKFFDLCKK-SPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LETRFIKLNVE--------RAPFLT-GQ--- 128 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~~-~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~-~~~~f~kvd~~--------k~pfl~-~k--- 128 (332)
-+.+|++.+++.++++. .+.+||-||.++ |....+.|..+|..+ ....|....-. ..|.++ -+
T Consensus 7 ~v~~l~s~~~~~~~~~~~~~v~vVgff~~~---~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~~p~ivlfk~~~ 83 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGDDVVILGVFQGV---GDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVSLGKLVLMQPEK 83 (250)
T ss_dssp SSEECCCHHHHHHHHHHCSSCEEEEECSCT---TCHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHTCCSSEEEEECCGG
T ss_pred CceecCCHHHHHHHHhcCCCeEEEEEEcCC---CchHHHHHHHHHHhhhcCcEEEEECcHHHHHHcCCCCCeEEEEecch
Confidence 47889888999998887 889999999986 677888999999886 56777544211 112111 11
Q ss_pred ----CCC-------------------------CcccccCChhHHHHHhccCCcEEEEEecCC-C---h-hhHHHHHHHHH
Q psy6451 129 ----QGH-------------------------GEYEEIPDEKKFFDLCKKSPNMVVHFYKDG-S---V-NCKILDEHMKT 174 (332)
Q Consensus 129 ----~g~-------------------------g~~~ei~~e~~~~~~~~~~~~VvV~Fya~w-c---~-~Ck~l~~~l~~ 174 (332)
... .-+.+++.+ .+.... .+.+.++.|+.+. + . ....+...+.+
T Consensus 84 ~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~-n~~~~~-~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~ 161 (250)
T 3ec3_A 84 FQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTS-NDAKRY-SKRPLVVVYYSVDFSFDYRTATQFWRNKVLE 161 (250)
T ss_dssp GCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTT-THHHHS-CSSSEEEEEECCCCSTTTHHHHHHHHHHHHH
T ss_pred hhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCcc-chhhhh-ccCccEEEEEecccccccchhHHHHHHHHHH
Confidence 011 112233332 222222 3566777777533 2 3 34558889999
Q ss_pred HHHHcCCceEEEEECcCChHHHHhCCccc--Cc-EEEEEe
Q psy6451 175 LCKKHLETRFIKLNVERAPFLTERLRIKV--IP-TLTLVK 211 (332)
Q Consensus 175 La~~~~~v~f~kVd~~~~~~l~~~~~I~~--~P-Tl~~~~ 211 (332)
+|++|..+.|+.+|++......+.||+.. +| .++++.
T Consensus 162 vAk~~kki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~ 201 (250)
T 3ec3_A 162 VAKDFPEYTFAIADEEDYATEVKDLGLSESGGDVNAAILD 201 (250)
T ss_dssp HHTTCTTSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEEC
T ss_pred HHHhhcceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEc
Confidence 99998889999999998888889999974 44 666664
No 377
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=97.71 E-value=2.3e-05 Score=62.93 Aligned_cols=42 Identities=17% Similarity=0.395 Sum_probs=37.9
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
+++++||.||++||++|+.+.+.|.+++..+. ++.|+.++..
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d 76 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLV 76 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEcc
Confidence 67889999999999999999999999999997 6788887664
No 378
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.70 E-value=1.5e-05 Score=62.50 Aligned_cols=45 Identities=18% Similarity=0.180 Sum_probs=31.6
Q ss_pred hhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 72 KFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 72 ~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
++++.+.++..+++ ||+|||++|+.+.+.|..++..| .++.++..
T Consensus 11 ~~~~~~~~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~~---~~v~v~~~ 55 (116)
T 2e7p_A 11 KKAKELASSAPVVV-FSKTYCGYCNRVKQLLTQVGASY---KVVELDEL 55 (116)
T ss_dssp HHHHHHHTSSSEEE-EECTTCHHHHHHHHHHHHHTCCC---EEEEGGGS
T ss_pred HHHHHHHcCCCEEE-EECCCChhHHHHHHHHHHcCCCe---EEEEccCC
Confidence 33333334456776 99999999999999999887654 45555544
No 379
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.66 E-value=9.5e-05 Score=65.50 Aligned_cols=73 Identities=12% Similarity=0.179 Sum_probs=55.7
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHHHHcC--CceEEEEECcCC----------------------------hHHHHhCCc
Q psy6451 152 NMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVERA----------------------------PFLTERLRI 201 (332)
Q Consensus 152 ~VvV~Fya~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~~----------------------------~~l~~~~~I 201 (332)
.||+.||++||+.|....+.|.++..+|. ++.++.|.++.. ..++..|++
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 44555689999999999999999998885 378888776531 235667787
Q ss_pred c------------cCcEEEEE-eCCeeeeeEecccC
Q psy6451 202 K------------VIPTLTLV-KDSVTKDYIVGFTE 224 (332)
Q Consensus 202 ~------------~~PTl~~~-~~G~~v~~~~G~~~ 224 (332)
. .+|+++++ ++|+++..+.|...
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~ 149 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPAT 149 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTT
T ss_pred CCcccccCCCCCcccceEEEECCCCEEEEEEecCCC
Confidence 3 47999888 59999999877543
No 380
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.66 E-value=2.4e-05 Score=62.66 Aligned_cols=41 Identities=15% Similarity=0.250 Sum_probs=28.7
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh------ceeeecccCCC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE------TRFIKLNVERA 122 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~------~~f~kvd~~k~ 122 (332)
+...+||.||++||+.|+.|++.+ +..+.. +.++++|++..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i---~~~~~~~a~~~~~~l~~vdv~~~ 63 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEI---APQYPLTDEGRAAPVQRLQMRDP 63 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHT---TTTGGGSHHHHHSCEEEEETTSC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHH---HhhHHHhhhcccceEEEEECCCC
Confidence 356799999999999999999644 333332 46677766653
No 381
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.64 E-value=4.9e-05 Score=60.18 Aligned_cols=42 Identities=14% Similarity=0.178 Sum_probs=38.5
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
+++++||+||++||++|+.+.+.|.+++..+.++.|+.++..
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~ 65 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGL 65 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 567899999999999999999999999999988888888765
No 382
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=97.63 E-value=4.6e-05 Score=61.41 Aligned_cols=43 Identities=12% Similarity=0.217 Sum_probs=38.2
Q ss_pred cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccC
Q psy6451 78 KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE 120 (332)
Q Consensus 78 ~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~ 120 (332)
-+++++||.||++||++|+.+.+.|.+++..+.+ +.|+.++..
T Consensus 27 ~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~ 70 (148)
T 2b5x_A 27 IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMP 70 (148)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECC
T ss_pred cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcC
Confidence 3568899999999999999999999999999987 888888754
No 383
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=97.53 E-value=7.8e-05 Score=60.37 Aligned_cols=42 Identities=7% Similarity=0.129 Sum_probs=36.3
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh---hceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL---ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~---~~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.+++..+. ++.++.++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d 71 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWD 71 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC
Confidence 46789999999999999999999999999987 4667776655
No 384
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=97.53 E-value=3.8e-05 Score=61.96 Aligned_cols=44 Identities=14% Similarity=0.266 Sum_probs=38.8
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccCCC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVERA 122 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~k~ 122 (332)
+++++||.||++||++|+.+.+.|.+++..+.. +.|+.++....
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~ 75 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK 75 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC
Confidence 467899999999999999999999999999976 78888877643
No 385
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=97.52 E-value=7.7e-05 Score=61.00 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=36.7
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.+++..+. ++.|+.++.+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d 66 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD 66 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC
Confidence 46889999999999999999999999999983 5777777764
No 386
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.50 E-value=2.9e-05 Score=67.75 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=35.6
Q ss_pred CCcEEEEEccCCChhhhhhHHHH---HHHHHhhhh-ceeeecccC
Q psy6451 80 SPNMVVHFYKDGSVNCKILDEHM---KTLCKKHLE-TRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy~p~~~~Ck~~~~~l---~~LA~~~~~-~~f~kvd~~ 120 (332)
.+++||+||++||+||+.+.|.| .+++..+++ +.|.++++.
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~ 157 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVN 157 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccC
Confidence 56799999999999999999999 999999874 677777654
No 387
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=97.50 E-value=8.3e-05 Score=61.67 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=38.5
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
+++++||.||++||++|+.+.+.|.+++..+.++.|+.++..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d 77 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDFW 77 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEEEec
Confidence 468999999999999999999999999999998888888765
No 388
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=97.50 E-value=9.2e-05 Score=60.18 Aligned_cols=42 Identities=5% Similarity=-0.014 Sum_probs=36.2
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh---hceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL---ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~---~~~f~kvd~~ 120 (332)
+++++||.||++||++|+.+.+.|.+++..+. ++.++.++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d 71 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWD 71 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCC
Confidence 46789999999999999999999999999987 4667766554
No 389
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.50 E-value=2.4e-05 Score=72.49 Aligned_cols=64 Identities=6% Similarity=-0.092 Sum_probs=43.3
Q ss_pred hhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeeccc-CCCCcccccCCCCccccc
Q psy6451 72 KFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV-ERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 72 ~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~-~k~pfl~~k~g~g~~~ei 137 (332)
.|-+..++. .+|.||+|||++|+.+.|.|+++|..+..+.+-+++. ++.+-++.+.+...++++
T Consensus 191 ~la~~l~~~--~vV~F~A~WC~~Ck~l~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~gI~~vPT~ 255 (291)
T 3kp9_A 191 GLAAHLRQI--GGTMYGAYWCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITSYPTW 255 (291)
T ss_dssp HHHHHHHHT--TCEEEECTTCHHHHHHHHHHGGGGGGSCEEESCSSCSSSCCCHHHHTTTCCSTTEE
T ss_pred HHHHHhCCC--CEEEEECCCCHHHHHHHHHHHHHHHHcCEEEEeecCchhhHHHHHHHcCCcccCeE
Confidence 444444333 4799999999999999999999997764222222333 335667777777666654
No 390
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=97.50 E-value=9.6e-05 Score=59.77 Aligned_cols=41 Identities=10% Similarity=0.208 Sum_probs=35.4
Q ss_pred CCcEEEEEccCCChhhhhhHHHHHH---HHHhhh--hceeeecccC
Q psy6451 80 SPNMVVHFYKDGSVNCKILDEHMKT---LCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy~p~~~~Ck~~~~~l~~---LA~~~~--~~~f~kvd~~ 120 (332)
++++||.||++||++|+.+.+.|.+ +...+. ++.++.++.+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d 76 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPD 76 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECS
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcC
Confidence 5789999999999999999999999 998884 4677777654
No 391
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.49 E-value=0.00022 Score=58.49 Aligned_cols=91 Identities=10% Similarity=0.037 Sum_probs=60.0
Q ss_pred HHHHhccCCcEEEEEec----CCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHH----hCCcccCcEEEEEeCCe
Q psy6451 143 FFDLCKKSPNMVVHFYK----DGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTE----RLRIKVIPTLTLVKDSV 214 (332)
Q Consensus 143 ~~~~~~~~~~VvV~Fya----~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~----~~~I~~~PTl~~~~~G~ 214 (332)
+.+.+.. ..|+|+.++ |||+.|+.+...|..+ ++.|..+|++..+.+.+ ..+...+|.| |.+|+
T Consensus 28 v~~~i~~-~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-----gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~V--fI~G~ 99 (135)
T 2wci_A 28 IQRQIAE-NPILLYMKGSPKLPSCGFSAQAVQALAAC-----GERFAYVDILQNPDIRAELPKYANWPTFPQL--WVDGE 99 (135)
T ss_dssp HHHHHHH-CSEEEEESBCSSSBSSHHHHHHHHHHHTT-----CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EETTE
T ss_pred HHHHhcc-CCEEEEEEecCCCCCCccHHHHHHHHHHc-----CCceEEEECCCCHHHHHHHHHHHCCCCcCEE--EECCE
Confidence 3344444 456665555 9999999999888654 57788899988766544 4577888875 56887
Q ss_pred eeeeEecccCcchhhHhH-HHHHHHHHHHcCCcc
Q psy6451 215 TKDYIVGFTELGNCADFS-TEMLEWRIAQAGVID 247 (332)
Q Consensus 215 ~v~~~~G~~~~~~~~~f~-~~~Le~~L~~~g~l~ 247 (332)
.+ .|+.. +..+. ...|..+|...|++.
T Consensus 100 ~i---GG~d~---l~~l~~~G~L~~~L~~~g~~~ 127 (135)
T 2wci_A 100 LV---GGCDI---VIEMYQRGELQQLIKETAAKY 127 (135)
T ss_dssp EE---ESHHH---HHHHHHHTHHHHHHHHHHHHH
T ss_pred EE---EChHH---HHHHHHCChHHHHHHHcCCCC
Confidence 54 34332 22333 336888888777764
No 392
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.49 E-value=6.2e-05 Score=64.90 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=37.2
Q ss_pred CCcEEEEEecCCChhhHHHHHHH---HHHHHHcCC-ceEEEEECcC
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHM---KTLCKKHLE-TRFIKLNVER 191 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l---~~La~~~~~-v~f~kVd~~~ 191 (332)
..++||.||..|||+|+.+.|.+ ..+++++++ ++|+.+++.-
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechh
Confidence 46889999999999999999987 689888885 9999999765
No 393
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=97.46 E-value=0.00011 Score=59.30 Aligned_cols=42 Identities=10% Similarity=0.192 Sum_probs=36.0
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh---hceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL---ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~---~~~f~kvd~~ 120 (332)
+++++||.||++||++|+.+.+.|.+++..+. ++.++.++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d 71 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWD 71 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC
Confidence 46789999999999999999999999999987 4666666554
No 394
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.45 E-value=5e-05 Score=55.98 Aligned_cols=39 Identities=13% Similarity=0.264 Sum_probs=34.8
Q ss_pred EEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCC
Q psy6451 83 MVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVER 121 (332)
Q Consensus 83 vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k 121 (332)
-|+.|++|||+.|+.+.+.|..++..++++.|..+|...
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~ 40 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRA 40 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 367899999999999999999999998888898888764
No 395
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.45 E-value=0.001 Score=59.18 Aligned_cols=72 Identities=8% Similarity=0.014 Sum_probs=55.2
Q ss_pred cCCcEEEEEecCC-ChhhH-----HHHHHHHHHHHHcCCceEEEEECcC-----------------------ChHHHHhC
Q psy6451 149 KSPNMVVHFYKDG-SVNCK-----ILDEHMKTLCKKHLETRFIKLNVER-----------------------APFLTERL 199 (332)
Q Consensus 149 ~~~~VvV~Fya~w-c~~Ck-----~l~~~l~~La~~~~~v~f~kVd~~~-----------------------~~~l~~~~ 199 (332)
.+++|||.||+.| |++|. ...+.|.++ |.++.++-|..+. ...++..|
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~vak~y 123 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WPHLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFHKRY 123 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CTTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHHHHT
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cCCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHHHHh
Confidence 4689999999988 99999 666666665 5667787777652 23577889
Q ss_pred Cccc---------CcEEEEE-eCCeeeeeEeccc
Q psy6451 200 RIKV---------IPTLTLV-KDSVTKDYIVGFT 223 (332)
Q Consensus 200 ~I~~---------~PTl~~~-~~G~~v~~~~G~~ 223 (332)
|+.. .|+.+++ ++|.++....+..
T Consensus 124 Gv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~ 157 (224)
T 3keb_A 124 GVLITEYPLSGYTSPAIILADAANVVHYSERLAN 157 (224)
T ss_dssp TCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSB
T ss_pred CCccccccccCCccCEEEEEcCCCEEEEEEecCC
Confidence 9875 7999888 4999998876654
No 396
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=97.45 E-value=8.5e-05 Score=62.28 Aligned_cols=43 Identities=12% Similarity=0.203 Sum_probs=36.7
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh---ceeeecccCC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE---TRFIKLNVER 121 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~---~~f~kvd~~k 121 (332)
+++++||.||++||+.|+.+.+.|.+++..|.+ +.|+.++.+.
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~ 92 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDE 92 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 467899999999999999999999999999874 6676666554
No 397
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.43 E-value=0.00097 Score=57.21 Aligned_cols=92 Identities=10% Similarity=0.113 Sum_probs=64.0
Q ss_pred ccCCcEEEEEecCCChhhHHHHHHH---HHHHHHcC-CceEEEEECcCCh---------------HHHH---hCCcccCc
Q psy6451 148 KKSPNMVVHFYKDGSVNCKILDEHM---KTLCKKHL-ETRFIKLNVERAP---------------FLTE---RLRIKVIP 205 (332)
Q Consensus 148 ~~~~~VvV~Fya~wc~~Ck~l~~~l---~~La~~~~-~v~f~kVd~~~~~---------------~l~~---~~~I~~~P 205 (332)
+..++++|++++|||..|..+...+ +.+.+-.. ...+...|++... .++. .|++.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 4579999999999999999988432 22222221 4778888888653 3443 49999999
Q ss_pred EEEEEe-C---CeeeeeEecccCcchhhHhHHHHHHHH
Q psy6451 206 TLTLVK-D---SVTKDYIVGFTELGNCADFSTEMLEWR 239 (332)
Q Consensus 206 Tl~~~~-~---G~~v~~~~G~~~~~~~~~f~~~~Le~~ 239 (332)
++.++. . ++++.++.|..+...+...+.+.++..
T Consensus 133 ~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e~~ 170 (178)
T 2ec4_A 133 LFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIF 170 (178)
T ss_dssp EEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 999984 2 467899999887655544444444443
No 398
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=97.43 E-value=6.5e-05 Score=59.22 Aligned_cols=54 Identities=17% Similarity=0.244 Sum_probs=44.7
Q ss_pred cEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccccc
Q psy6451 82 NMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 82 ~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
.+|+.|++|||+.|+.+.+.|.+++..+. +.|.++|++..+.+..+.|.. ++.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~-VP~l 83 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR-VPVL 83 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS-CSEE
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC-CceE
Confidence 57999999999999999999999998875 889999988777666666653 5444
No 399
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=97.41 E-value=9e-05 Score=59.73 Aligned_cols=42 Identities=10% Similarity=0.207 Sum_probs=36.6
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhh-hh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~-~~--~~f~kvd~~ 120 (332)
+++++||.||++||++|+.+.+.|.+++..+ .+ +.|+.++..
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d 76 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLD 76 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECC
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECC
Confidence 4678999999999999999999999999998 44 677777655
No 400
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=97.41 E-value=0.00013 Score=61.70 Aligned_cols=43 Identities=7% Similarity=0.264 Sum_probs=37.5
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--c------eeeecccCC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--T------RFIKLNVER 121 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~------~f~kvd~~k 121 (332)
+++++||.||++||++|+.+.+.|.+++..|.. + .|+.++...
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~ 108 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD 108 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC
Confidence 467899999999999999999999999999976 6 888887764
No 401
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.00021 Score=58.02 Aligned_cols=93 Identities=14% Similarity=0.227 Sum_probs=56.5
Q ss_pred hHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcCC--h-----HHHHhCCcccCcEEEEEeCC
Q psy6451 141 KKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERA--P-----FLTERLRIKVIPTLTLVKDS 213 (332)
Q Consensus 141 ~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~--~-----~l~~~~~I~~~PTl~~~~~G 213 (332)
++|.+.++.++ |+.|..||||.|+.+...|..... .++.|..++++.. + .+.+..|...+|++ |-+|
T Consensus 5 ~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~~~--~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~I--fI~G 78 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSKSTCSYSKGMKELLENEYQ--FIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNL--LVNG 78 (127)
T ss_dssp HHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHHEE--EESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETT
T ss_pred HHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHhcc--cCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceE--EECC
Confidence 45666666655 778899999999999987776311 1234555555533 1 23344588899998 4588
Q ss_pred eeeeeEecccCcchhhHhH-HHHHHHHHHHcCC
Q psy6451 214 VTKDYIVGFTELGNCADFS-TEMLEWRIAQAGV 245 (332)
Q Consensus 214 ~~v~~~~G~~~~~~~~~f~-~~~Le~~L~~~g~ 245 (332)
+.+. |+.++ ..+. ...|..+|...|.
T Consensus 79 ~~IG---G~ddl---~~l~~~G~L~~lL~~~g~ 105 (127)
T 3l4n_A 79 VSRG---GNEEI---KKLHTQGKLLESLQVWSD 105 (127)
T ss_dssp EECC---CHHHH---HHHHHTTCHHHHHHHTCT
T ss_pred EEEc---CHHHH---HHHHHCCCHHHHHHHhcC
Confidence 6542 33322 2222 2267777766654
No 402
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=97.41 E-value=0.00018 Score=59.83 Aligned_cols=41 Identities=10% Similarity=0.301 Sum_probs=35.6
Q ss_pred cCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 78 KKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 78 ~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
.+++++||.||++||++|+.+.+.|.+++.. ++.|+.++..
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~ 89 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYK 89 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEES
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECC
Confidence 4678999999999999999999999999987 6777777643
No 403
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.40 E-value=0.00016 Score=59.63 Aligned_cols=57 Identities=9% Similarity=0.081 Sum_probs=41.9
Q ss_pred ceEecCCchhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhh--hhceeeecccC
Q psy6451 63 EYEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKH--LETRFIKLNVE 120 (332)
Q Consensus 63 ~~~ev~~e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~--~~~~f~kvd~~ 120 (332)
.+..++ .+.+.....+++++||.||++||++|+.+.+.|.+++..| .++.|+.+...
T Consensus 22 ~l~~~~-g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~ 80 (164)
T 2h30_A 22 TMKTAD-NRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASP 80 (164)
T ss_dssp TCEETT-SSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECT
T ss_pred ccCCCC-CCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcC
Confidence 455553 2334433346788999999999999999999999999986 45666666543
No 404
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=97.39 E-value=0.00013 Score=60.14 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=38.3
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh--hceeeecccCC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER 121 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~k 121 (332)
+++++||.||++||+.|+.+.+.|.+++..+. ++.|+.++.+.
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 46789999999999999999999999999997 67888887765
No 405
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.38 E-value=0.00015 Score=59.63 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=38.1
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccCC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER 121 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~k 121 (332)
+++++||.||++||++|+.+.+.|.+++..+.. +.|+.++...
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~ 77 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE 77 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC
Confidence 568999999999999999999999999999975 6788887664
No 406
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.38 E-value=0.00072 Score=60.65 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=61.8
Q ss_pred ccccCChhHHHHHhccCCcEEEEEecCCChhhHHHHHHHHHHHHHc-CCceEEEEECcCChHHHHhCCcccCcEEEEEeC
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LETRFIKLNVERAPFLTERLRIKVIPTLTLVKD 212 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~-~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~~~ 212 (332)
+.++++.+++..++..+..+||-|+++|| ....+.|.++|..+ ..+.|+.+. .+.++++|++.. |++++|+.
T Consensus 8 v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~~fk~ 80 (252)
T 2h8l_A 8 SVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGIILFRP 80 (252)
T ss_dssp EEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEEEECC
T ss_pred ceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEEEEcc
Confidence 67888899999999989999999999984 55678899999998 559998773 467899999997 99999996
Q ss_pred C
Q psy6451 213 S 213 (332)
Q Consensus 213 G 213 (332)
+
T Consensus 81 ~ 81 (252)
T 2h8l_A 81 S 81 (252)
T ss_dssp G
T ss_pred h
Confidence 4
No 407
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.37 E-value=0.00016 Score=58.91 Aligned_cols=42 Identities=19% Similarity=0.243 Sum_probs=37.1
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.+++..+.. +.|+.++..
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d 68 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVG 68 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECC
Confidence 467899999999999999999999999999875 778877665
No 408
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=97.36 E-value=0.00015 Score=59.46 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=36.1
Q ss_pred CCCcEEEEEccCCChhhhh-hHHHHHHHHHhhhh--ceeeeccc
Q psy6451 79 KSPNMVVHFYKDGSVNCKI-LDEHMKTLCKKHLE--TRFIKLNV 119 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~-~~~~l~~LA~~~~~--~~f~kvd~ 119 (332)
+++++||.||++||++|+. +.+.|.+++..|.+ +.|+.++.
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~ 72 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHS 72 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEEC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEec
Confidence 4789999999999999999 79999999999975 77777765
No 409
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.33 E-value=0.00013 Score=72.73 Aligned_cols=66 Identities=5% Similarity=0.050 Sum_probs=52.3
Q ss_pred hhhhhhc--CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccccc
Q psy6451 72 KFFDLCK--KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 72 ~f~~~~~--~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
++++.+. ..+..++-|++|||+.|+.+.+.|.++|..++.+.|.++|.+..+-+..+.+...++++
T Consensus 107 ~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~~~i~svPt~ 174 (521)
T 1hyu_A 107 SLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAV 174 (521)
T ss_dssp HHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred HHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhhHHHHHHhCCCccCEE
Confidence 4444443 24557899999999999999999999999999999999999887777766666555443
No 410
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.0012 Score=52.87 Aligned_cols=92 Identities=15% Similarity=0.076 Sum_probs=59.7
Q ss_pred hccCCcEEEEEec----CCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHH----HhCCcccCcEEEEEeCCeeeee
Q psy6451 147 CKKSPNMVVHFYK----DGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLT----ERLRIKVIPTLTLVKDSVTKDY 218 (332)
Q Consensus 147 ~~~~~~VvV~Fya----~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~----~~~~I~~~PTl~~~~~G~~v~~ 218 (332)
+-+..+|+|+-.. ||||.|+.+...|..+.-.+ ..|..+|+...+.+. +..|-..+|.+ |.+|+.+
T Consensus 12 ~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~--~~~~~~dv~~~~~~~~~l~~~sg~~tvP~v--fI~g~~i-- 85 (121)
T 3gx8_A 12 AIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDP--AKFAAYNVLEDPELREGIKEFSEWPTIPQL--YVNKEFI-- 85 (121)
T ss_dssp HHHSCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCG--GGEEEEECTTCHHHHHHHHHHHTCCSSCEE--EETTEEE--
T ss_pred HhccCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCc--ceEEEEEecCCHHHHHHHHHHhCCCCCCeE--EECCEEE--
Confidence 3344555555554 69999999998888763221 137788888776543 34477788887 5588654
Q ss_pred EecccCcchhhHhH-HHHHHHHHHHcCCccc
Q psy6451 219 IVGFTELGNCADFS-TEMLEWRIAQAGVIDY 248 (332)
Q Consensus 219 ~~G~~~~~~~~~f~-~~~Le~~L~~~g~l~~ 248 (332)
-|+..+ ..+. ...|..+|...|++..
T Consensus 86 -GG~d~l---~~l~~~G~L~~~L~~~g~~~~ 112 (121)
T 3gx8_A 86 -GGCDVI---TSMARSGELADLLEEAQALVP 112 (121)
T ss_dssp -ESHHHH---HHHHHHTHHHHHHHHTTCBCC
T ss_pred -ecHHHH---HHHHHcCChHHHHHHcCCCCC
Confidence 344332 2222 3489999999998854
No 411
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=97.31 E-value=0.0002 Score=58.51 Aligned_cols=42 Identities=12% Similarity=0.217 Sum_probs=37.0
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.+++..+.. +.|+.++..
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d 71 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTD 71 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEcc
Confidence 467899999999999999999999999999875 777777655
No 412
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=97.30 E-value=0.0002 Score=58.73 Aligned_cols=41 Identities=7% Similarity=0.119 Sum_probs=35.9
Q ss_pred CCCcEEEEEccCCChhhhhh-HHHHHHHHHhhh--hceeeeccc
Q psy6451 79 KSPNMVVHFYKDGSVNCKIL-DEHMKTLCKKHL--ETRFIKLNV 119 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~-~~~l~~LA~~~~--~~~f~kvd~ 119 (332)
+++++||.||++||+.|+.. .+.|.+++..|. ++.|+.++.
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~ 70 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHT 70 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEEC
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEe
Confidence 46799999999999999995 999999999997 477777765
No 413
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.27 E-value=5.3e-05 Score=57.36 Aligned_cols=49 Identities=12% Similarity=0.184 Sum_probs=38.3
Q ss_pred EEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCCCCcccccCCCCccccc
Q psy6451 84 VVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 84 vVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei 137 (332)
|+.|++|||+.|+.+.+.|.+++..+ |.++|++..+.+..+.|.. ++++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~~-vPtl 51 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA----FFSVFIDDDAALESAYGLR-VPVL 51 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTTT-CSEE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCCC-cCeE
Confidence 78899999999999999999888764 5788888776666655554 4444
No 414
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=97.27 E-value=0.0002 Score=57.53 Aligned_cols=42 Identities=14% Similarity=0.369 Sum_probs=35.4
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHH---HHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKT---LCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~---LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.+ +...+.. +.|+.++.+
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d 72 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPD 72 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEec
Confidence 46889999999999999999999998 8888754 677777654
No 415
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=97.26 E-value=0.00026 Score=57.46 Aligned_cols=42 Identities=12% Similarity=0.201 Sum_probs=37.1
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.+++..+.. +.|+.++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d 70 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLD 70 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 467899999999999999999999999999976 677777655
No 416
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=97.26 E-value=0.00022 Score=57.64 Aligned_cols=42 Identities=5% Similarity=0.128 Sum_probs=36.2
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.++...|.. +.|+.++.+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMD 74 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEcc
Confidence 467899999999999999999999999999863 677777654
No 417
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=97.26 E-value=0.0015 Score=52.09 Aligned_cols=88 Identities=16% Similarity=0.125 Sum_probs=57.8
Q ss_pred hccCCcEEEEEec----CCChhhHHHHHHHHHHHHHcCCce-EEEEECcCChHHHH----hCCcccCcEEEEEeCCeeee
Q psy6451 147 CKKSPNMVVHFYK----DGSVNCKILDEHMKTLCKKHLETR-FIKLNVERAPFLTE----RLRIKVIPTLTLVKDSVTKD 217 (332)
Q Consensus 147 ~~~~~~VvV~Fya----~wc~~Ck~l~~~l~~La~~~~~v~-f~kVd~~~~~~l~~----~~~I~~~PTl~~~~~G~~v~ 217 (332)
+-+..+|+|+-.. ||||.|+.+...|..+ ++. |..+|++..+.+.+ ..+-..+|++ |.+|+.+
T Consensus 16 ~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-----gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~v--fI~g~~I- 87 (118)
T 2wem_A 16 LVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLH-----GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQV--YLNGEFV- 87 (118)
T ss_dssp HHHHSSEEEEESBCSSSBSSHHHHHHHHHHHHT-----TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEE--EETTEEE-
T ss_pred HhccCCEEEEEecCCCCCccHHHHHHHHHHHHc-----CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeE--EECCEEE-
Confidence 3334455554444 6999999999887754 453 77888887766543 3477889997 5688654
Q ss_pred eEecccCcchhhHhH-HHHHHHHHHHcCCcc
Q psy6451 218 YIVGFTELGNCADFS-TEMLEWRIAQAGVID 247 (332)
Q Consensus 218 ~~~G~~~~~~~~~f~-~~~Le~~L~~~g~l~ 247 (332)
-|+..+ ..+. ...|..+|.+.|+..
T Consensus 88 --GG~d~l---~~l~~~G~L~~~L~~~g~~~ 113 (118)
T 2wem_A 88 --GGCDIL---LQMHQNGDLVEELKKLGIHS 113 (118)
T ss_dssp --ESHHHH---HHHHHHSHHHHHHHHTTCCC
T ss_pred --eChHHH---HHHHHCCCHHHHHHHcCChh
Confidence 344332 2333 338888999988763
No 418
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.34 E-value=4.3e-05 Score=61.46 Aligned_cols=42 Identities=10% Similarity=0.106 Sum_probs=35.9
Q ss_pred CC-cEEEEEccCCChhhhhhHHHHHHHHHhh----hhceeeecccCC
Q psy6451 80 SP-NMVVHFYKDGSVNCKILDEHMKTLCKKH----LETRFIKLNVER 121 (332)
Q Consensus 80 ~~-~vvVhFy~p~~~~Ck~~~~~l~~LA~~~----~~~~f~kvd~~k 121 (332)
++ ++||.||++||+.|+.+.+.|.+++..+ .++.++.++...
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~ 71 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDR 71 (143)
Confidence 45 8999999999999999999999999988 467777776653
No 419
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.25 E-value=0.0025 Score=59.67 Aligned_cols=89 Identities=11% Similarity=0.165 Sum_probs=62.4
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCCceEEEEECcC---------------------ChHHHHhCCcc----
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLETRFIKLNVER---------------------APFLTERLRIK---- 202 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~---------------------~~~l~~~~~I~---- 202 (332)
++++||+.|| +.||+.|....+.|.+ ..+.++.++.|..+. ...+++.||+.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~--~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~~ 100 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSR--ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENGK 100 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHH--SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETTE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHH--HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCCc
Confidence 4789999999 6799999987777654 234557777777653 23578889994
Q ss_pred cCcEEEEE-eCCeeeeeEecccCcchhhHhHHHHHHHHH
Q psy6451 203 VIPTLTLV-KDSVTKDYIVGFTELGNCADFSTEMLEWRI 240 (332)
Q Consensus 203 ~~PTl~~~-~~G~~v~~~~G~~~~~~~~~f~~~~Le~~L 240 (332)
.+||.+++ ++|.+...+.+....+.. +-+.+.|+++.
T Consensus 101 ~~r~tfiId~~G~i~~~~~~v~~~~h~-~~~l~~~~~~~ 138 (322)
T 4eo3_A 101 TVRSTFLIDRWGFVRKEWRRVKVEGHV-QEVKEALDRLI 138 (322)
T ss_dssp ECCEEEEECTTSBEEEEEESCCSTTHH-HHHHHHHHHHH
T ss_pred CccEEEEECCCCEEEEEEeCCCccccH-HHHHHHHhhhc
Confidence 57887777 699999988888665553 33334444443
No 420
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=97.23 E-value=0.00031 Score=57.18 Aligned_cols=42 Identities=17% Similarity=0.257 Sum_probs=36.8
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.+++..+.+ +.|+.++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d 70 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSID 70 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcC
Confidence 467899999999999999999999999999976 667777655
No 421
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.23 E-value=0.0018 Score=56.33 Aligned_cols=41 Identities=24% Similarity=0.469 Sum_probs=32.6
Q ss_pred CCcEEEEEecCCChhhHHHHHHH-HHHHHHcC---CceEEEEECc
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHM-KTLCKKHL---ETRFIKLNVE 190 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l-~~La~~~~---~v~f~kVd~~ 190 (332)
.+..||.|+...||+|+.+.+.+ ..|.++|+ .++|+..+..
T Consensus 29 a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 29 APVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 46789999999999999999886 66777774 3788776643
No 422
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.21 E-value=0.00018 Score=61.80 Aligned_cols=41 Identities=10% Similarity=0.228 Sum_probs=37.3
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHHHHHcCCceEEEEECcC
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVER 191 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~ 191 (332)
++++||.|+..|||+|+.+.|.+.++.+++ ++.|.++.+.-
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~v~~~~~p~~~ 62 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-GTDIGKMHITF 62 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-TSCCEEEECCS
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-CCeEEEEeccC
Confidence 578999999999999999999999999999 88888888753
No 423
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=97.18 E-value=0.00038 Score=56.51 Aligned_cols=43 Identities=16% Similarity=0.245 Sum_probs=36.9
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccCC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER 121 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~k 121 (332)
+++++||.||++||+.|+.+.+.|.+++..+.+ +.|+.++...
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~ 73 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDK 73 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccC
Confidence 367899999999999999999999999999875 6777776553
No 424
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=97.16 E-value=0.00032 Score=57.17 Aligned_cols=38 Identities=13% Similarity=0.215 Sum_probs=35.6
Q ss_pred CcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeeccc
Q psy6451 81 PNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV 119 (332)
Q Consensus 81 ~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~ 119 (332)
+++||.||++||+.|+.+.+.|.+++..+ ++.|+.++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~ 68 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISR 68 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEEC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 78999999999999999999999999999 888888876
No 425
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=97.15 E-value=0.00037 Score=54.79 Aligned_cols=41 Identities=10% Similarity=0.126 Sum_probs=35.5
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeeccc
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNV 119 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~ 119 (332)
+++++||.||++||++|+.+.+.|.+++..+. ++.++.++.
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~ 62 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVS 62 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEEC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEc
Confidence 46789999999999999999999999999976 467777743
No 426
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=97.12 E-value=0.00039 Score=57.14 Aligned_cols=42 Identities=7% Similarity=0.135 Sum_probs=36.6
Q ss_pred CCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccCC
Q psy6451 80 SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER 121 (332)
Q Consensus 80 ~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~k 121 (332)
++++||.||++||+.|+...+.|.+++..|.+ +.|+.++.+.
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~ 78 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDG 78 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSC
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccC
Confidence 57899999999999999999999999999875 6777776653
No 427
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.12 E-value=0.00029 Score=57.39 Aligned_cols=41 Identities=17% Similarity=0.232 Sum_probs=35.7
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
.++++||.||++||++|+.+.+.|.+++.. ..+.|+.++..
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~ 81 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD-KRFQLVGINYK 81 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-TTSEEEEEEES
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-CCeEEEEEECC
Confidence 477899999999999999999999999887 55888887654
No 428
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.11 E-value=0.00012 Score=53.68 Aligned_cols=55 Identities=11% Similarity=0.179 Sum_probs=37.1
Q ss_pred EEEEEccCCChhhhhhHHHHHHHHHhhh-hceeeecccC-CCCcccccCCCCccccc
Q psy6451 83 MVVHFYKDGSVNCKILDEHMKTLCKKHL-ETRFIKLNVE-RAPFLTGQQGHGEYEEI 137 (332)
Q Consensus 83 vvVhFy~p~~~~Ck~~~~~l~~LA~~~~-~~~f~kvd~~-k~pfl~~k~g~g~~~ei 137 (332)
-++-||+|||++|+.+.+.|.+++..+. ...++.++.. ..+-+..+.|...++++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~ 59 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPAL 59 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEE
Confidence 3678999999999999999999887763 4566777653 23333344444444433
No 429
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.09 E-value=0.0019 Score=57.83 Aligned_cols=74 Identities=11% Similarity=0.123 Sum_probs=62.0
Q ss_pred cccccCChhHHHHHhcc-CCcEEEEEecCCChhhHHHHHHHHHHHHHc-CCceEEEEECcCChHHHHhCCcccCcEEEEE
Q psy6451 133 EYEEIPDEKKFFDLCKK-SPNMVVHFYKDGSVNCKILDEHMKTLCKKH-LETRFIKLNVERAPFLTERLRIKVIPTLTLV 210 (332)
Q Consensus 133 ~~~ei~~e~~~~~~~~~-~~~VvV~Fya~wc~~Ck~l~~~l~~La~~~-~~v~f~kVd~~~~~~l~~~~~I~~~PTl~~~ 210 (332)
.+.++++.+++.+.++. +..+||-|++++| ....+.|.++|..+ ..+.|+.+ ..+.+++.|++.. |+|++|
T Consensus 7 ~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t---~~~~v~~~~~v~~-p~ivlf 79 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHT---FSTEIAKFLKVSL-GKLVLM 79 (250)
T ss_dssp SSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEE---CCHHHHHHHTCCS-SEEEEE
T ss_pred CceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEE---CcHHHHHHcCCCC-CeEEEE
Confidence 36788898999998888 8999999999985 56788999999988 55999875 3567888999988 999999
Q ss_pred eCC
Q psy6451 211 KDS 213 (332)
Q Consensus 211 ~~G 213 (332)
+.+
T Consensus 80 k~~ 82 (250)
T 3ec3_A 80 QPE 82 (250)
T ss_dssp CCG
T ss_pred ecc
Confidence 853
No 430
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.09 E-value=0.00053 Score=55.65 Aligned_cols=41 Identities=5% Similarity=0.104 Sum_probs=35.5
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeeccc
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNV 119 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~ 119 (332)
+++++||.||++||++|+.+.+.|.+++..+.. +.|+.++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~ 69 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQ 69 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEec
Confidence 567899999999999999999999999999875 66666653
No 431
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=97.08 E-value=0.00051 Score=56.83 Aligned_cols=42 Identities=10% Similarity=0.041 Sum_probs=36.4
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.||++||+.|+...+.|.+++..+.+ +.++.++.+
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCN 74 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECC
Confidence 468899999999999999999999999999865 677777653
No 432
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.05 E-value=0.0001 Score=56.89 Aligned_cols=53 Identities=8% Similarity=0.051 Sum_probs=38.9
Q ss_pred CCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC--CCCcccccCCCCcccc
Q psy6451 80 SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE--RAPFLTGQQGHGEYEE 136 (332)
Q Consensus 80 ~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~--k~pfl~~k~g~g~~~e 136 (332)
..++|+.|++|||+.|+.+.+.|.+++.. +.|..+|++ ..+.+..+.| ..++.
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~~---i~~~~vdi~~~~~~el~~~~g-~~vP~ 69 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKDR---FILQEVDITLPENSTWYERYK-FDIPV 69 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSSS---SEEEEEETTSSTTHHHHHHSS-SSCSE
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhhC---CeEEEEECCCcchHHHHHHHC-CCCCE
Confidence 45688899999999999999999877643 778888876 4444444555 44443
No 433
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=97.05 E-value=0.00056 Score=56.50 Aligned_cols=42 Identities=2% Similarity=-0.001 Sum_probs=36.4
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.||++||+.|+...+.|.++...+.+ +.++.++.+
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d 73 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCN 73 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 467999999999999999999999999999865 677777653
No 434
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=97.02 E-value=0.00052 Score=55.86 Aligned_cols=42 Identities=12% Similarity=0.282 Sum_probs=36.7
Q ss_pred CCCcEEEEEccCCChh--hhhhHHHHHHHHHhh---hhceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVN--CKILDEHMKTLCKKH---LETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~--Ck~~~~~l~~LA~~~---~~~~f~kvd~~ 120 (332)
+++++||.||++||+. |+.+.+.|.++...| .++.|+.++.+
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d 78 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLD 78 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcC
Confidence 4678999999999999 999999999999998 45777777665
No 435
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.02 E-value=0.00057 Score=57.74 Aligned_cols=42 Identities=14% Similarity=0.309 Sum_probs=36.6
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.++...+. ++.++.++.+
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d 102 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINID 102 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECC
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECC
Confidence 46789999999999999999999999999986 5777777655
No 436
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=97.00 E-value=0.00057 Score=57.91 Aligned_cols=42 Identities=17% Similarity=0.198 Sum_probs=36.5
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.+++..|.. +.|+.++..
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d 74 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINAN 74 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcC
Confidence 357899999999999999999999999999977 777776653
No 437
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.91 E-value=0.0028 Score=49.51 Aligned_cols=65 Identities=14% Similarity=0.097 Sum_probs=44.6
Q ss_pred HHhccCCcEEEEEec----CCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHH----hCCcccCcEEEEEeCCeee
Q psy6451 145 DLCKKSPNMVVHFYK----DGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTE----RLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 145 ~~~~~~~~VvV~Fya----~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~----~~~I~~~PTl~~~~~G~~v 216 (332)
+.+-+...|+|+-.. |||+.|+.+...|..+ ++.|-.+|++..+.+.+ ..+...+|++ |.+|+.+
T Consensus 12 ~~~i~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~-----gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~i--fi~g~~i 84 (109)
T 3ipz_A 12 EKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNL-----NVPFEDVNILENEMLRQGLKEYSNWPTFPQL--YIGGEFF 84 (109)
T ss_dssp HHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHT-----TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEE--EETTEEE
T ss_pred HHHHccCCEEEEEecCCCCCCChhHHHHHHHHHHc-----CCCcEEEECCCCHHHHHHHHHHHCCCCCCeE--EECCEEE
Confidence 333444556654444 6999999999888764 46778888887765433 4478899975 5588654
No 438
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=96.90 E-value=0.00087 Score=56.74 Aligned_cols=42 Identities=5% Similarity=-0.078 Sum_probs=36.3
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.|+++||+.|+...+.|.+++..|.. +.++.++..
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d 91 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCN 91 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECc
Confidence 467899999999999999999999999999875 677777554
No 439
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=96.85 E-value=0.0039 Score=53.32 Aligned_cols=78 Identities=10% Similarity=0.064 Sum_probs=55.5
Q ss_pred HHhccCCcEEEEEecCCChhhHH-HHHHHHHHHHHcC--Cc-eEEEEECcC-----------------------ChHHHH
Q psy6451 145 DLCKKSPNMVVHFYKDGSVNCKI-LDEHMKTLCKKHL--ET-RFIKLNVER-----------------------APFLTE 197 (332)
Q Consensus 145 ~~~~~~~~VvV~Fya~wc~~Ck~-l~~~l~~La~~~~--~v-~f~kVd~~~-----------------------~~~l~~ 197 (332)
+.++....||+.|++.|||.|.. -.|.|.+++.++. ++ .++-|..+. ...+++
T Consensus 43 d~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ 122 (176)
T 4f82_A 43 DQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTH 122 (176)
T ss_dssp HHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHH
T ss_pred HHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcCchHHHH
Confidence 33333344566777999999999 9999999988874 47 777777653 124677
Q ss_pred hCCcc-----------cCcEEEEEeCCeeeeeEecc
Q psy6451 198 RLRIK-----------VIPTLTLVKDSVTKDYIVGF 222 (332)
Q Consensus 198 ~~~I~-----------~~PTl~~~~~G~~v~~~~G~ 222 (332)
.||+. ..|+.+++++|+++...++.
T Consensus 123 ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~ 158 (176)
T 4f82_A 123 ALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEA 158 (176)
T ss_dssp HHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECC
T ss_pred HhCCCccccccCCCcccccEEEEEcCCEEEEEEEcC
Confidence 77763 24766666999999888864
No 440
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=96.84 E-value=0.00095 Score=56.31 Aligned_cols=39 Identities=13% Similarity=0.281 Sum_probs=34.4
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeeccc
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNV 119 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~ 119 (332)
+++++||.||++||+.|+.+.+.|.+++.. ++.|+.++.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~vs~ 95 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINY 95 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCEEEEEEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--CCEEEEEeC
Confidence 467899999999999999999999999988 677777764
No 441
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=96.80 E-value=0.0011 Score=55.90 Aligned_cols=41 Identities=12% Similarity=-0.070 Sum_probs=35.4
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeeccc
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNV 119 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~ 119 (332)
+++++||.|+++||+.|+...+.|.+++..|.+ +.++.|.+
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~ 79 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPC 79 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEEC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 467999999999999999999999999999865 56666653
No 442
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=96.80 E-value=0.0012 Score=56.04 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=35.3
Q ss_pred CC-cEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 80 SP-NMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 80 ~~-~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
++ ++||.||++||+.|+.+.+.|.+++..|.. +.|+.++..
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d 88 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSN 88 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECS
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 45 499999999999999999999999999874 677777654
No 443
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=96.78 E-value=0.0013 Score=56.11 Aligned_cols=42 Identities=14% Similarity=0.006 Sum_probs=36.3
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.|+++||+.|+...+.|.++...|.+ +.++.++.+
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 90 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCN 90 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcC
Confidence 467899999999999999999999999999865 677777554
No 444
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=96.78 E-value=0.00099 Score=56.75 Aligned_cols=42 Identities=14% Similarity=-0.001 Sum_probs=36.0
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.|+++||+.|+...+.|.++...|.+ +.++.|...
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 88 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSN 88 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECc
Confidence 468899999999999999999999999999865 666666543
No 445
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=96.76 E-value=0.00099 Score=55.14 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=36.3
Q ss_pred CCCcEEEEEccCCChh-hhhhHHHHHHHHHhhh-----hceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVN-CKILDEHMKTLCKKHL-----ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~-Ck~~~~~l~~LA~~~~-----~~~f~kvd~~ 120 (332)
+++++||.||++||+. |+...+.|.++...+. ++.|+.++.+
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d 81 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVD 81 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESC
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEEC
Confidence 4678999999999996 9999999999999987 5777777654
No 446
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=96.74 E-value=0.0014 Score=55.44 Aligned_cols=42 Identities=10% Similarity=0.074 Sum_probs=36.3
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.|+++||+.|+...+.|.++...|.. +.|+.++..
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 467899999999999999999999999999865 677777543
No 447
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=96.71 E-value=0.0014 Score=62.19 Aligned_cols=42 Identities=12% Similarity=0.274 Sum_probs=37.1
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.||++||+.|+.+.+.|.+++..|.. +.|+.|++.
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d 124 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTP 124 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 367899999999999999999999999999974 778888654
No 448
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=95.72 E-value=0.00026 Score=58.18 Aligned_cols=43 Identities=12% Similarity=0.230 Sum_probs=35.9
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHH-HHHhhh---hceeeecccCC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKT-LCKKHL---ETRFIKLNVER 121 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~-LA~~~~---~~~f~kvd~~k 121 (332)
+++++||.||++||+.|+.+.+.|.+ +...+. ++.|+.++.+.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~ 78 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDE 78 (159)
Confidence 35789999999999999999999998 887775 56777776653
No 449
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.69 E-value=0.013 Score=51.79 Aligned_cols=40 Identities=10% Similarity=0.316 Sum_probs=31.1
Q ss_pred CCcEEEEEecCCChhhHHHHHH-HHHHHHHcC--C-ceEEEEEC
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEH-MKTLCKKHL--E-TRFIKLNV 189 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~-l~~La~~~~--~-v~f~kVd~ 189 (332)
.+..|+.|+...||+|+.+.+. +..|.++|. + ++|+..+.
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~ 82 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHF 82 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEEC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeC
Confidence 4667999999999999999986 478888883 3 66665543
No 450
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.0013 Score=54.95 Aligned_cols=40 Identities=10% Similarity=0.043 Sum_probs=34.8
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeeccc
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNV 119 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~ 119 (332)
+++++||.||++||+.|+ ..+.|.+++..+.. +.++.++.
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~ 72 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPC 72 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEEC
Confidence 467899999999999999 99999999999864 67777754
No 451
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.66 E-value=0.0015 Score=55.83 Aligned_cols=42 Identities=10% Similarity=0.233 Sum_probs=36.1
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~ 120 (332)
..+.+||.|+.+||++|+.+.+.+.+++..+++ +.|..+...
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 466799999999999999999999999999985 667666554
No 452
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.64 E-value=0.0055 Score=45.43 Aligned_cols=57 Identities=14% Similarity=0.117 Sum_probs=41.4
Q ss_pred EEEEecC----CChhhHHHHHHHHHHHHHcCCceEEEEECc-----CChH----HHHhCCcc-----cCcEEEEEeCCee
Q psy6451 154 VVHFYKD----GSVNCKILDEHMKTLCKKHLETRFIKLNVE-----RAPF----LTERLRIK-----VIPTLTLVKDSVT 215 (332)
Q Consensus 154 vV~Fya~----wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~-----~~~~----l~~~~~I~-----~~PTl~~~~~G~~ 215 (332)
|+.|+.+ ||+.|+.+...|+.+ ++.|-.+|++ ..+. +.+..+.. .+|++++ .+|+.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-----gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~~g~~ 75 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-----KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-PDGSH 75 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-----TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-TTSCE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-----CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-ECCEE
Confidence 4567899 999999999877653 4667778887 5543 55667887 8998753 37764
Q ss_pred e
Q psy6451 216 K 216 (332)
Q Consensus 216 v 216 (332)
+
T Consensus 76 i 76 (87)
T 1aba_A 76 I 76 (87)
T ss_dssp E
T ss_pred E
Confidence 3
No 453
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=96.63 E-value=0.0018 Score=56.58 Aligned_cols=42 Identities=5% Similarity=-0.054 Sum_probs=35.5
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
++++|||.|+++||+.|+...+.|.+|...|.. +.++.|++.
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 467899999999999999999999999998864 566666543
No 454
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=96.62 E-value=0.0017 Score=53.78 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=35.0
Q ss_pred CCcEEEEEccCCChh-hhhhHHHHHHHHHhhh------hceeeecccC
Q psy6451 80 SPNMVVHFYKDGSVN-CKILDEHMKTLCKKHL------ETRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy~p~~~~-Ck~~~~~l~~LA~~~~------~~~f~kvd~~ 120 (332)
++++||.|+++||+. |+...+.|.++...+. ++.|+.++.+
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d 73 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD 73 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC
Confidence 678999999999997 9999999999999984 5776666544
No 455
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.58 E-value=0.018 Score=47.44 Aligned_cols=78 Identities=10% Similarity=0.077 Sum_probs=56.3
Q ss_pred ccccCChhHHHHHhccCCcEEEEEec-CCChhhHHHHHHHHHHHHHcCC-ceEEEEEC--cCChHHHHhCCccc--CcEE
Q psy6451 134 YEEIPDEKKFFDLCKKSPNMVVHFYK-DGSVNCKILDEHMKTLCKKHLE-TRFIKLNV--ERAPFLTERLRIKV--IPTL 207 (332)
Q Consensus 134 ~~ei~~e~~~~~~~~~~~~VvV~Fya-~wc~~Ck~l~~~l~~La~~~~~-v~f~kVd~--~~~~~l~~~~~I~~--~PTl 207 (332)
+.+++.+. ......+.-++++.++. +.-..-..+.+.+.++|++|.+ +.|+.+|. +....+.+.||+.. +|++
T Consensus 16 V~e~t~en-~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v 94 (147)
T 3bj5_A 16 VIEFTEQT-APKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPAV 94 (147)
T ss_dssp EEECCTTT-HHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEE
T ss_pred eEEecccc-HHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCEE
Confidence 34444443 34445555555555444 3444567789999999999987 99999999 66667889999986 9999
Q ss_pred EEEeC
Q psy6451 208 TLVKD 212 (332)
Q Consensus 208 ~~~~~ 212 (332)
.++..
T Consensus 95 ~i~~~ 99 (147)
T 3bj5_A 95 RLITL 99 (147)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99875
No 456
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=96.53 E-value=0.0023 Score=54.26 Aligned_cols=42 Identities=10% Similarity=0.077 Sum_probs=36.0
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.|+++||+.|+...+.|.++...+.. +.++.++.+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 467899999999999999999999999999864 677777543
No 457
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=96.52 E-value=0.0024 Score=52.84 Aligned_cols=42 Identities=7% Similarity=0.106 Sum_probs=37.2
Q ss_pred CCCcEEEEEccCC-ChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 79 KSPNMVVHFYKDG-SVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~-~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
+++++||.||++| |+.|+...+.|.+++..|.++.|+.++.+
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d 85 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISAD 85 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECS
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3678999999999 99999999999999999977888877665
No 458
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.0078 Score=53.14 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=59.4
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcC--CceEEEEECcC----------------------------ChHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVER----------------------------APFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~--~v~f~kVd~~~----------------------------~~~l~~ 197 (332)
++++||+.|| +.||+.|....+.|..+..+|. ++.++.|.++. ...+++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak 130 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSR 130 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHH
Confidence 4689999999 9999999999999999998875 47888887663 134788
Q ss_pred hCCcc------cCcEEEEE-eCCeeeeeEecccCcc
Q psy6451 198 RLRIK------VIPTLTLV-KDSVTKDYIVGFTELG 226 (332)
Q Consensus 198 ~~~I~------~~PTl~~~-~~G~~v~~~~G~~~~~ 226 (332)
.||+. .+++++++ .+|.+....+...+.+
T Consensus 131 ~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~g 166 (216)
T 3sbc_A 131 DYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVG 166 (216)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBC
T ss_pred HcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCC
Confidence 88883 35666666 5898877766554444
No 459
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=96.48 E-value=0.0025 Score=55.80 Aligned_cols=41 Identities=10% Similarity=0.197 Sum_probs=35.5
Q ss_pred CCc-EEEEEccCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 80 SPN-MVVHFYKDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 80 ~~~-vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++ +||.||++||+.|+...+.|.+++..|.+ +.|+.|+..
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d 101 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSN 101 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECS
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 554 99999999999999999999999999965 677777653
No 460
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.48 E-value=0.0021 Score=55.34 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=34.7
Q ss_pred CCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeeecccC
Q psy6451 80 SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~kvd~~ 120 (332)
.+.+||.||.+||++|+.+.+.+.+++..+++ +.|..+...
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 46699999999999999999999999999985 556655543
No 461
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.47 E-value=0.0055 Score=48.14 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=42.4
Q ss_pred cCCcEEEEEec-----CCChhhHHHHHHHHHHHHHcCCceEEEEECcCChHHHH----hCCcccCcEEEEEeCCeee
Q psy6451 149 KSPNMVVHFYK-----DGSVNCKILDEHMKTLCKKHLETRFIKLNVERAPFLTE----RLRIKVIPTLTLVKDSVTK 216 (332)
Q Consensus 149 ~~~~VvV~Fya-----~wc~~Ck~l~~~l~~La~~~~~v~f~kVd~~~~~~l~~----~~~I~~~PTl~~~~~G~~v 216 (332)
+..+|+ .|.. ||||.|+.+...|... ++.|..+|++..+.+.+ ..+-..+|++ |.+|+.+
T Consensus 14 ~~~~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~-----gi~y~~~di~~d~~~~~~l~~~~g~~tvP~i--fi~g~~i 82 (111)
T 3zyw_A 14 HAAPCM-LFMKGTPQEPRCGFSKQMVEILHKH-----NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQL--YVSGELI 82 (111)
T ss_dssp TSSSEE-EEESBCSSSBSSHHHHHHHHHHHHT-----TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EETTEEE
T ss_pred hcCCEE-EEEecCCCCCcchhHHHHHHHHHHc-----CCCeEEEECcCCHHHHHHHHHHHCCCCCCEE--EECCEEE
Confidence 344444 4556 9999999999887753 46777888887766533 3477889987 4588654
No 462
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=96.40 E-value=0.0021 Score=52.72 Aligned_cols=41 Identities=10% Similarity=0.189 Sum_probs=34.5
Q ss_pred CC-cEEEEEc-cCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 80 SP-NMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 80 ~~-~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
++ ++||.|| ++||+.|+...+.|.+++..+. ++.++.++.+
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d 79 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG 79 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC
Confidence 44 8999998 9999999999999999999884 4677766543
No 463
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=96.39 E-value=0.0029 Score=51.77 Aligned_cols=42 Identities=10% Similarity=0.084 Sum_probs=34.6
Q ss_pred CCCcEEEEEccCCChh-hhhhHHHHHHHHHhhh------hceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVN-CKILDEHMKTLCKKHL------ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~-Ck~~~~~l~~LA~~~~------~~~f~kvd~~ 120 (332)
+++++||.|+++||+. |....+.|.++...+. ++.++.+..+
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d 70 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID 70 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC
Confidence 3678999999999997 9999999999999885 5566655543
No 464
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.37 E-value=0.013 Score=43.97 Aligned_cols=56 Identities=4% Similarity=0.016 Sum_probs=40.4
Q ss_pred EEEEecCCChhh------HHHHHHHHHHHHHcCCceEEEEECcCChH----HHHhCC--cccCcEEEEEeCCeee
Q psy6451 154 VVHFYKDGSVNC------KILDEHMKTLCKKHLETRFIKLNVERAPF----LTERLR--IKVIPTLTLVKDSVTK 216 (332)
Q Consensus 154 vV~Fya~wc~~C------k~l~~~l~~La~~~~~v~f~kVd~~~~~~----l~~~~~--I~~~PTl~~~~~G~~v 216 (332)
|+.|+.+||+.| +.+...|+. .++.|..+|++..+. +.+.+| ...+|.+ |.+|+.+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~-----~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~i--fi~g~~i 71 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG-----KRIQYQLVDISQDNALRDEMRTLAGNPKATPPQI--VNGNHYC 71 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH-----TTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEE--EETTEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH-----CCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEE--EECCEEE
Confidence 567889999999 666655543 247788899987754 445677 7799987 4588654
No 465
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=96.32 E-value=0.0029 Score=53.58 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=35.7
Q ss_pred CCcEEEEEc-cCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 80 SPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
++++||.|| ++||+.|....+.|.+++..|. ++.++.++.+
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d 74 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTD 74 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESS
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 578999999 9999999999999999999987 4677777654
No 466
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=96.31 E-value=0.0079 Score=50.93 Aligned_cols=119 Identities=15% Similarity=0.131 Sum_probs=0.0
Q ss_pred cCCCcEEEEEccCCChhhhhhHHHH-HHHHHhhhhceeeecccCCCCcccccCCCCcccccCChhHHHHHhccCCcEEEE
Q psy6451 78 KKSPNMVVHFYKDGSVNCKILDEHM-KTLCKKHLETRFIKLNVERAPFLTGQQGHGEYEEIPDEKKFFDLCKKSPNMVVH 156 (332)
Q Consensus 78 ~~~~~vvVhFy~p~~~~Ck~~~~~l-~~LA~~~~~~~f~kvd~~k~pfl~~k~g~g~~~ei~~e~~~~~~~~~~~~VvV~ 156 (332)
...+..|+.|+.+.|++|+.+.+.+ ..|...|++. ++.-|+.
T Consensus 9 ~~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~-------------------------------------~~v~~~~ 51 (186)
T 3bci_A 9 KNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDN-------------------------------------HKVEYQF 51 (186)
T ss_dssp --CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-------------------------------------TSSEEEE
T ss_pred CCCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccC-------------------------------------CeEEEEE
Q ss_pred EecCCC-hhhHHHHHHHHHHHHHcCC--ceEEE---------------------------EECcC---------------
Q psy6451 157 FYKDGS-VNCKILDEHMKTLCKKHLE--TRFIK---------------------------LNVER--------------- 191 (332)
Q Consensus 157 Fya~wc-~~Ck~l~~~l~~La~~~~~--v~f~k---------------------------Vd~~~--------------- 191 (332)
..-|.- +.+......+..++..-++ ..|.. ++.+.
T Consensus 52 ~~~p~~~~~s~~aa~a~~~a~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~~~ 131 (186)
T 3bci_A 52 VNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKS 131 (186)
T ss_dssp EECCCSCTTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCHH
T ss_pred EecCcCCcchHHHHHHHHHHHHhCHHHHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcCHHH
Q ss_pred ------ChHHHHhCCcccCcEEEEEeCCeeeeeEecccCcchhhHhHHHHHHH
Q psy6451 192 ------APFLTERLRIKVIPTLTLVKDSVTKDYIVGFTELGNCADFSTEMLEW 238 (332)
Q Consensus 192 ------~~~l~~~~~I~~~PTl~~~~~G~~v~~~~G~~~~~~~~~f~~~~Le~ 238 (332)
...++..+||.++||+++ ||+.+. |..+...+..++...++.
T Consensus 132 ~~~v~~~~~~a~~~gv~GtPt~vv--nG~~~~---G~~~~~~l~~~i~~~~~~ 179 (186)
T 3bci_A 132 WKAAEKDKKIAKDNHIKTTPTAFI--NGEKVE---DPYDYESYEKLLKDKIKL 179 (186)
T ss_dssp HHHHHHHHHHHHHTTCCSSSEEEE--TTEECS---CTTCHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHcCCCCCCeEEE--CCEEcC---CCCCHHHHHHHHHHHHHh
No 467
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.29 E-value=0.0035 Score=51.72 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=34.9
Q ss_pred CCc-EEEEEc-cCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 80 SPN-MVVHFY-KDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 80 ~~~-vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
++. +||.|| ++||+.|....+.|.+++..|.. +.|+.++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d 72 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD 72 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 555 999999 99999999999999999999965 667766543
No 468
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=96.29 E-value=0.0035 Score=52.40 Aligned_cols=38 Identities=16% Similarity=0.293 Sum_probs=32.7
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeee
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIK 116 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~k 116 (332)
+.+.+|+.|+.+||++|+.+.+.|.++...++.++|.-
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~ 58 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVY 58 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEE
Confidence 35679999999999999999999999999888765543
No 469
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=96.25 E-value=0.0029 Score=54.11 Aligned_cols=41 Identities=17% Similarity=0.295 Sum_probs=35.8
Q ss_pred CCcEEEEEc-cCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 80 SPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
++++||.|| ++||+.|....+.|.++...|. ++.|+.|+.+
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d 88 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSID 88 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999999 9999999999999999999987 4777777654
No 470
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=96.25 E-value=0.0033 Score=53.80 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=36.0
Q ss_pred CCCcEEEEEc-cCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 79 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
+++++||.|| ++||++|....+.|.+++..|. ++.|+.++.+
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 77 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD 77 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3578999999 9999999999999999999984 4777777654
No 471
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.21 E-value=0.002 Score=55.26 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=33.9
Q ss_pred CcEEEEEccCCChhhhhhHHHH---HHHHHhhh-hceeeecccC
Q psy6451 81 PNMVVHFYKDGSVNCKILDEHM---KTLCKKHL-ETRFIKLNVE 120 (332)
Q Consensus 81 ~~vvVhFy~p~~~~Ck~~~~~l---~~LA~~~~-~~~f~kvd~~ 120 (332)
.++||.||.+||++|+.+.+.+ ..++..++ .++|+.++..
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 58 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVS 58 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECS
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEech
Confidence 5789999999999999999987 68888887 4777777654
No 472
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.21 E-value=0.014 Score=45.72 Aligned_cols=58 Identities=7% Similarity=0.062 Sum_probs=41.1
Q ss_pred cEEEEEecCCChhhH------HHHHHHHHHHHHcCCceEEEEECcCChH----HHHhC--------CcccCcEEEEEeCC
Q psy6451 152 NMVVHFYKDGSVNCK------ILDEHMKTLCKKHLETRFIKLNVERAPF----LTERL--------RIKVIPTLTLVKDS 213 (332)
Q Consensus 152 ~VvV~Fya~wc~~Ck------~l~~~l~~La~~~~~v~f~kVd~~~~~~----l~~~~--------~I~~~PTl~~~~~G 213 (332)
.-|+.|+.+||+.|+ .+...|+. .++.|..+|++..+. +.+.+ +...+|.| |.+|
T Consensus 8 m~V~vy~~~~C~~C~~~~~~~~ak~~L~~-----~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~v--fi~g 80 (111)
T 2ct6_A 8 MVIRVFIASSSGFVAIKKKQQDVVRFLEA-----NKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQI--FNGD 80 (111)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHH-----TTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEE--EETT
T ss_pred cEEEEEEcCCCCCcccchhHHHHHHHHHH-----cCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEE--EECC
Confidence 346778899999999 56655543 247888999988765 34454 66778876 4578
Q ss_pred eee
Q psy6451 214 VTK 216 (332)
Q Consensus 214 ~~v 216 (332)
+.+
T Consensus 81 ~~i 83 (111)
T 2ct6_A 81 RYC 83 (111)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 473
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=96.20 E-value=0.0036 Score=51.84 Aligned_cols=42 Identities=26% Similarity=0.361 Sum_probs=35.7
Q ss_pred CCCcEEEEEccCCCh-hhhhhHHHHHHHHHhhhh----ceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSV-NCKILDEHMKTLCKKHLE----TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~-~Ck~~~~~l~~LA~~~~~----~~f~kvd~~ 120 (332)
+++++||.|+++||+ .|....+.|.++...+.. +.++.|+.+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 78 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD 78 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC
Confidence 467899999999999 999999999999998864 667766554
No 474
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.17 E-value=0.0024 Score=54.60 Aligned_cols=40 Identities=10% Similarity=0.261 Sum_probs=35.0
Q ss_pred CCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 80 SPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
++++||.||..||+||+.+.+.+.++.+.+ ++.|.++.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-CCeEEEEecc
Confidence 567999999999999999999999999998 7777766553
No 475
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.11 E-value=0.0019 Score=49.44 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=29.9
Q ss_pred hhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeec
Q psy6451 73 FFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKL 117 (332)
Q Consensus 73 f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kv 117 (332)
+.++++.. .|+-|++|||++|+.+.+.|..++..++...++.+
T Consensus 5 ~~~~i~~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~~~~~vdi 47 (105)
T 1kte_A 5 VNSKIQPG--KVVVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDI 47 (105)
T ss_dssp HHHHCCTT--CEEEEECSSCHHHHHHHHHHHHSCBCTTSEEEEEG
T ss_pred HHhhcccC--CEEEEEcCCCHhHHHHHHHHHHcCCCCCccEEEEc
Confidence 34444433 36669999999999999999888766554333333
No 476
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=95.93 E-value=0.0045 Score=52.98 Aligned_cols=42 Identities=17% Similarity=0.265 Sum_probs=35.6
Q ss_pred CCCcEEEEEc-cCCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 79 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
+++++||.|| ++||+.|....+.|.++...|.. +.++.++.+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 76 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID 76 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 3578999999 99999999999999999998864 667766654
No 477
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=95.92 E-value=0.0048 Score=52.53 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=36.0
Q ss_pred CCCcEEEEEc-cCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 79 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
+++++||.|| ++||+.|....+.|.+++..|. ++.++.++.+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d 74 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD 74 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC
Confidence 4678999999 9999999999999999999984 5777777654
No 478
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=95.88 E-value=0.0063 Score=52.33 Aligned_cols=41 Identities=15% Similarity=0.247 Sum_probs=35.8
Q ss_pred CCcEEEEEc-cCCChhhhhhHHHHHHHHHhh--hhceeeecccC
Q psy6451 80 SPNMVVHFY-KDGSVNCKILDEHMKTLCKKH--LETRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~--~~~~f~kvd~~ 120 (332)
++++||.|| +.||+.|....+.|.+++..| .++.|+.++.+
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D 79 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD 79 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999 999999999999999999998 45777777654
No 479
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=95.78 E-value=0.0052 Score=53.74 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=27.1
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHh
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKK 108 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~ 108 (332)
+++.+|+.|++|||++|+.+.+.|.+++..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~ 114 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL 114 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC
Confidence 367899999999999999999999999864
No 480
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.77 E-value=0.0075 Score=50.26 Aligned_cols=43 Identities=7% Similarity=0.162 Sum_probs=29.6
Q ss_pred cCCCcEEEEEccCCChhhhhhHHHH---HHHHHhh-hhceeeecccC
Q psy6451 78 KKSPNMVVHFYKDGSVNCKILDEHM---KTLCKKH-LETRFIKLNVE 120 (332)
Q Consensus 78 ~~~~~vvVhFy~p~~~~Ck~~~~~l---~~LA~~~-~~~~f~kvd~~ 120 (332)
+..++++|.||++||..|+.|+... ..++... -...++++|.+
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~ 86 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHD 86 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESS
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecC
Confidence 4478999999999999999998655 2233222 23455666654
No 481
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=95.69 E-value=0.0091 Score=50.07 Aligned_cols=41 Identities=2% Similarity=0.135 Sum_probs=36.1
Q ss_pred CCCcEEEEEccCC-ChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 79 KSPNMVVHFYKDG-SVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~-~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
+++++||.||+.| |+.|....+.|.++... .++.|+.|+.+
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v~vv~Is~D 84 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-SGATVLCVSKD 84 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cCCEEEEEECC
Confidence 3678999999999 99999999999999988 78888887664
No 482
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=95.69 E-value=0.0073 Score=51.34 Aligned_cols=38 Identities=16% Similarity=0.308 Sum_probs=32.6
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHhhhh-ceeee
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRFIK 116 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~-~~f~k 116 (332)
.++.+||.|+.+||++|+.+.+.|.++...++. +.|..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~ 62 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVR 62 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEE
Confidence 456799999999999999999999999999875 44443
No 483
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=95.67 E-value=0.0087 Score=52.24 Aligned_cols=42 Identities=12% Similarity=0.160 Sum_probs=36.0
Q ss_pred CCCcEEEEEc-cCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 79 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
+++++||.|| ++||+.|....+.|.+++..|. ++.++.|..+
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D 95 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD 95 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999 9999999999999999999984 5777777654
No 484
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=95.61 E-value=0.0054 Score=43.45 Aligned_cols=33 Identities=9% Similarity=0.291 Sum_probs=25.6
Q ss_pred EEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCC
Q psy6451 84 VVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVER 121 (332)
Q Consensus 84 vVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k 121 (332)
++-|+++||+.|+.+.+.|.++ ++.|..++...
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~i~~~~~di~~ 35 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----GLAYNTVDISL 35 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCCcEEEECCC
Confidence 5679999999999999998765 45566666554
No 485
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=95.60 E-value=0.011 Score=50.84 Aligned_cols=42 Identities=5% Similarity=-0.007 Sum_probs=33.6
Q ss_pred CCCcEEEEEccCCChh-hhhhHHHHHHHHHhhh-----hceeeecccC
Q psy6451 79 KSPNMVVHFYKDGSVN-CKILDEHMKTLCKKHL-----ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~-Ck~~~~~l~~LA~~~~-----~~~f~kvd~~ 120 (332)
+++++||.|+++||+. |....+.|.++...+. ++.++.|+.+
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D 87 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD 87 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC
Confidence 4679999999999997 9999999999777664 4566655544
No 486
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=95.53 E-value=0.011 Score=51.83 Aligned_cols=41 Identities=15% Similarity=0.275 Sum_probs=35.8
Q ss_pred CCcEEEEEc-cCCChhhhhhHHHHHHHHHhh--hhceeeecccC
Q psy6451 80 SPNMVVHFY-KDGSVNCKILDEHMKTLCKKH--LETRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~--~~~~f~kvd~~ 120 (332)
++++||.|| +.||+.|....+.|.+++..| .++.++.|..+
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D 99 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD 99 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999999 999999999999999999998 45777777654
No 487
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=95.41 E-value=0.16 Score=43.54 Aligned_cols=32 Identities=9% Similarity=0.012 Sum_probs=27.5
Q ss_pred EEEEEecCCChhhHHHHHHHHHHHHHcCC-ceE
Q psy6451 153 MVVHFYKDGSVNCKILDEHMKTLCKKHLE-TRF 184 (332)
Q Consensus 153 VvV~Fya~wc~~Ck~l~~~l~~La~~~~~-v~f 184 (332)
.|..|+-+-||.|-...|.|.+++++|+. +.+
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~~~v~v 36 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQF 36 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSCTTSEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCCCCceE
Confidence 57788899999999999999999999864 444
No 488
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=95.40 E-value=0.017 Score=47.29 Aligned_cols=41 Identities=12% Similarity=0.243 Sum_probs=33.9
Q ss_pred CCcEEEEEcc-CCChhhhhhHHHHHHHHHhhhh--ceeeecccC
Q psy6451 80 SPNMVVHFYK-DGSVNCKILDEHMKTLCKKHLE--TRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy~-p~~~~Ck~~~~~l~~LA~~~~~--~~f~kvd~~ 120 (332)
++++||.||+ .||+.|....+.|.++...|.. +.++.|..+
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 78 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD 78 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999998 9999999999999999998864 566655443
No 489
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=95.36 E-value=0.012 Score=51.50 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=35.6
Q ss_pred CCCcEEEEEcc-CCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 79 KSPNMVVHFYK-DGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~-p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
+++++||.||+ .||+.|....+.|.++...|. ++.|+.|+.+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D 112 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD 112 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 46789999997 999999999999999999985 4677766554
No 490
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=95.35 E-value=0.027 Score=47.57 Aligned_cols=41 Identities=12% Similarity=0.294 Sum_probs=35.0
Q ss_pred CCcEEEEEecCCChhhHHHHHHH-HHHHHHcCC-ceEEEEECc
Q psy6451 150 SPNMVVHFYKDGSVNCKILDEHM-KTLCKKHLE-TRFIKLNVE 190 (332)
Q Consensus 150 ~~~VvV~Fya~wc~~Ck~l~~~l-~~La~~~~~-v~f~kVd~~ 190 (332)
.++++|.||.++||+|..+.+.+ ..|.++++. +++..+...
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 56788999999999999999999 999999976 777766644
No 491
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=95.30 E-value=0.0079 Score=43.44 Aligned_cols=33 Identities=21% Similarity=0.447 Sum_probs=25.8
Q ss_pred EEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccCC
Q psy6451 84 VVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVER 121 (332)
Q Consensus 84 vVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~k 121 (332)
++.|++|||+.|+.+.+.|.++ ++.|..+|...
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~i~~~~vdi~~ 35 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----GFDFEMINVDR 35 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTT
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----CCCeEEEECCC
Confidence 6779999999999999998764 45666666554
No 492
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.20 E-value=0.011 Score=51.57 Aligned_cols=30 Identities=17% Similarity=0.317 Sum_probs=26.8
Q ss_pred CCCcEEEEEccCCChhhhhhHHHHHHHHHh
Q psy6451 79 KSPNMVVHFYKDGSVNCKILDEHMKTLCKK 108 (332)
Q Consensus 79 ~~~~vvVhFy~p~~~~Ck~~~~~l~~LA~~ 108 (332)
+++.+|+.|+.+||++|+.+.+.|..++..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~ 114 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL 114 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC
Confidence 466799999999999999999999998764
No 493
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.15 E-value=0.0085 Score=48.19 Aligned_cols=34 Identities=12% Similarity=0.306 Sum_probs=25.5
Q ss_pred hhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHH
Q psy6451 71 KKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLC 106 (332)
Q Consensus 71 ~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA 106 (332)
+.|.+++... .++| |++|||++|+.+.+.|..+.
T Consensus 18 ~~~~~~i~~~-~vvv-f~~~~Cp~C~~~~~~L~~~~ 51 (130)
T 2cq9_A 18 NQIQETISDN-CVVI-FSKTSCSYCTMAKKLFHDMN 51 (130)
T ss_dssp HHHHHHHHHS-SEEE-EECSSCSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCC-cEEE-EEcCCChHHHHHHHHHHHcC
Confidence 3455555544 4555 99999999999999998764
No 494
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=95.10 E-value=0.017 Score=47.79 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=35.3
Q ss_pred CCCcEEEEEc-cCCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 79 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
+++++||.|| +.||+.|..-.+.|.++...|.++.++.|..+
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~v~vv~Is~d 84 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTIVLCISAD 84 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHSTTEEEEEEESS
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3568999998 89999999999999999998866777776554
No 495
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=95.06 E-value=0.004 Score=48.76 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=26.0
Q ss_pred cEEEEEccCCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 82 NMVVHFYKDGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 82 ~vvVhFy~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
..|+-|++|||+.|+.+.+.|..++..++. |..+++.
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~~~--~~~vdi~ 55 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKRGA--YEIVDIK 55 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCTTS--EEEEEGG
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCcCc--eEEEEcc
Confidence 357779999999999999988765533211 5555544
No 496
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=94.93 E-value=0.019 Score=47.36 Aligned_cols=42 Identities=7% Similarity=0.060 Sum_probs=34.7
Q ss_pred CCCcEEEEEcc-CCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 79 KSPNMVVHFYK-DGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy~-p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
+++++||.||+ .||+.|....+.|.++...|.++.++.+..+
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~~~v~vv~is~d 83 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGLDNTVVLTVSMD 83 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESS
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEEECC
Confidence 35689999995 9999999999999999988866777766543
No 497
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=94.85 E-value=0.02 Score=47.54 Aligned_cols=41 Identities=5% Similarity=0.032 Sum_probs=34.3
Q ss_pred CCcEEEEEc-cCCChhhhhhHHHHHHHHHhhhhceeeecccC
Q psy6451 80 SPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLETRFIKLNVE 120 (332)
Q Consensus 80 ~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~~~~f~kvd~~ 120 (332)
++++||.|| +.||+.|....+.|.++...|.++.++.+..+
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~~~v~vv~Is~d 88 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGMEGVDVTVVSMD 88 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESS
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHcCCceEEEEeCC
Confidence 568999998 89999999999999999988866777666543
No 498
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=94.76 E-value=0.012 Score=48.42 Aligned_cols=35 Identities=11% Similarity=0.280 Sum_probs=26.9
Q ss_pred chhhhhhhcCCCcEEEEEccCCChhhhhhHHHHHHHH
Q psy6451 70 EKKFFDLCKKSPNMVVHFYKDGSVNCKILDEHMKTLC 106 (332)
Q Consensus 70 e~~f~~~~~~~~~vvVhFy~p~~~~Ck~~~~~l~~LA 106 (332)
...|.++++.. .|+| |++|||+.|+.+.+.|..++
T Consensus 39 ~~~~~~~i~~~-~Vvv-f~~~~Cp~C~~~k~~L~~~~ 73 (146)
T 2ht9_A 39 VNQIQETISDN-CVVI-FSKTSCSYCTMAKKLFHDMN 73 (146)
T ss_dssp HHHHHHHHHHC-SEEE-EECTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCC-CEEE-EECCCChhHHHHHHHHHHcC
Confidence 44666666554 4555 99999999999999998875
No 499
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=94.74 E-value=0.024 Score=49.25 Aligned_cols=42 Identities=17% Similarity=0.225 Sum_probs=35.0
Q ss_pred CCCcEEEEEc-cCCChhhhhhHHHHHHHHHhhh--hceeeecccC
Q psy6451 79 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHL--ETRFIKLNVE 120 (332)
Q Consensus 79 ~~~~vvVhFy-~p~~~~Ck~~~~~l~~LA~~~~--~~~f~kvd~~ 120 (332)
+++++||.|| +.||+.|....+.|.++...|. ++.++.|..+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D 91 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD 91 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3578999999 9999999999999999999884 5667666543
No 500
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=94.60 E-value=0.076 Score=46.84 Aligned_cols=78 Identities=13% Similarity=0.197 Sum_probs=57.6
Q ss_pred cCCcEEEEEe-cCCChhhHHHHHHHHHHHHHcCC--ceEEEEECcC----------------------------ChHHHH
Q psy6451 149 KSPNMVVHFY-KDGSVNCKILDEHMKTLCKKHLE--TRFIKLNVER----------------------------APFLTE 197 (332)
Q Consensus 149 ~~~~VvV~Fy-a~wc~~Ck~l~~~l~~La~~~~~--v~f~kVd~~~----------------------------~~~l~~ 197 (332)
++++||+.|| ++||+.|......|..+..+|.. +.++.|.++. ...+++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~ 134 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIAR 134 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHHH
Confidence 4689999999 99999999999999999888864 7888877653 234788
Q ss_pred hCCcc----cCc--EEEEE-eCCeeeeeEecccCcc
Q psy6451 198 RLRIK----VIP--TLTLV-KDSVTKDYIVGFTELG 226 (332)
Q Consensus 198 ~~~I~----~~P--Tl~~~-~~G~~v~~~~G~~~~~ 226 (332)
.||+. +++ .++++ .+|.+...++.....+
T Consensus 135 ~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~g 170 (219)
T 3tue_A 135 SYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVG 170 (219)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCC
T ss_pred HcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCC
Confidence 89884 333 34444 6888877765544443
Done!