Query psy6452
Match_columns 594
No_of_seqs 526 out of 3119
Neff 8.9
Searched_HMMs 46136
Date Fri Aug 16 18:15:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6452.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6452hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 7.9E-38 1.7E-42 368.2 33.0 436 145-593 88-572 (968)
2 KOG4194|consensus 100.0 2.4E-40 5.3E-45 336.8 5.9 344 154-591 82-439 (873)
3 PLN00113 leucine-rich repeat r 100.0 4.2E-36 9.1E-41 353.6 29.6 420 152-594 71-525 (968)
4 KOG4194|consensus 100.0 5.3E-38 1.2E-42 319.8 8.5 351 132-575 83-446 (873)
5 KOG0472|consensus 100.0 1.2E-36 2.6E-41 297.9 -8.4 416 139-586 57-545 (565)
6 KOG0472|consensus 100.0 8.9E-35 1.9E-39 284.9 -6.9 423 147-587 42-524 (565)
7 KOG0444|consensus 100.0 7.2E-34 1.6E-38 291.1 -4.0 321 231-585 52-379 (1255)
8 KOG0444|consensus 100.0 1.7E-33 3.6E-38 288.5 -4.8 328 227-587 25-358 (1255)
9 KOG0618|consensus 100.0 3.8E-32 8.2E-37 290.9 0.2 420 131-593 72-501 (1081)
10 PRK15387 E3 ubiquitin-protein 99.9 2.6E-26 5.6E-31 253.9 19.4 262 152-564 203-465 (788)
11 KOG0618|consensus 99.9 4.4E-29 9.6E-34 267.5 -5.5 393 151-585 46-469 (1081)
12 KOG4237|consensus 99.9 1.7E-26 3.6E-31 226.8 1.2 146 106-318 48-199 (498)
13 KOG4237|consensus 99.9 7.4E-27 1.6E-31 229.2 -3.8 263 155-475 51-356 (498)
14 PLN03210 Resistant to P. syrin 99.9 1.9E-22 4.1E-27 239.1 26.9 317 227-579 581-904 (1153)
15 PRK15387 E3 ubiquitin-protein 99.9 1E-22 2.2E-27 225.5 17.9 268 234-591 201-468 (788)
16 PRK15370 E3 ubiquitin-protein 99.9 1.9E-22 4E-27 224.7 14.1 247 234-558 178-428 (754)
17 PLN03210 Resistant to P. syrin 99.9 5.2E-21 1.1E-25 226.8 26.6 286 233-559 610-908 (1153)
18 PRK15370 E3 ubiquitin-protein 99.9 1.3E-21 2.9E-26 217.9 14.7 245 152-535 180-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 5.7E-17 1.2E-21 166.7 7.1 280 238-580 2-319 (319)
20 KOG0617|consensus 99.6 5.2E-18 1.1E-22 149.3 -4.2 115 458-582 95-213 (264)
21 KOG0617|consensus 99.6 4E-18 8.6E-23 150.1 -5.3 74 459-543 121-194 (264)
22 cd00116 LRR_RI Leucine-rich re 99.6 1.4E-15 2.9E-20 156.5 5.5 266 262-588 2-298 (319)
23 KOG3207|consensus 99.4 1E-14 2.2E-19 146.1 -0.1 157 232-395 119-284 (505)
24 KOG0532|consensus 99.4 1.3E-14 2.8E-19 149.5 -2.1 85 309-400 77-161 (722)
25 PF14580 LRR_9: Leucine-rich r 99.3 1.5E-12 3.2E-17 119.9 6.6 124 240-374 3-127 (175)
26 PF14580 LRR_9: Leucine-rich r 99.3 1.3E-12 2.7E-17 120.3 5.5 121 157-322 4-128 (175)
27 COG4886 Leucine-rich repeat (L 99.3 5.1E-12 1.1E-16 134.1 8.2 120 261-392 96-219 (394)
28 COG4886 Leucine-rich repeat (L 99.3 9.1E-12 2E-16 132.1 8.1 195 310-560 96-292 (394)
29 KOG2932|consensus 99.2 8.2E-12 1.8E-16 118.6 3.5 73 44-120 46-118 (389)
30 KOG3207|consensus 99.2 3.8E-12 8.3E-17 127.9 0.9 208 336-583 121-341 (505)
31 KOG0531|consensus 99.2 4.9E-12 1.1E-16 134.7 0.4 264 234-585 49-322 (414)
32 KOG0532|consensus 99.2 1.6E-12 3.5E-17 134.3 -3.3 142 227-382 114-256 (722)
33 KOG1259|consensus 99.2 7.4E-12 1.6E-16 120.0 1.0 131 441-585 284-416 (490)
34 KOG1909|consensus 99.1 4.6E-12 9.9E-17 124.2 -2.5 93 459-557 207-310 (382)
35 KOG0531|consensus 99.1 2.1E-11 4.6E-16 129.9 -0.3 155 233-399 71-225 (414)
36 KOG1259|consensus 99.1 4.3E-11 9.3E-16 114.8 1.4 62 337-399 285-346 (490)
37 KOG1909|consensus 98.9 2.5E-10 5.5E-15 112.1 1.1 91 232-322 28-135 (382)
38 PF13855 LRR_8: Leucine rich r 98.9 7.4E-10 1.6E-14 83.9 3.3 61 234-297 1-61 (61)
39 PF13855 LRR_8: Leucine rich r 98.9 1E-09 2.2E-14 83.2 3.5 58 523-580 2-61 (61)
40 PLN03150 hypothetical protein; 98.8 8.9E-09 1.9E-13 114.9 8.2 93 487-579 430-526 (623)
41 PLN03150 hypothetical protein; 98.7 2.2E-08 4.8E-13 111.8 7.8 107 442-558 419-528 (623)
42 KOG4658|consensus 98.7 3.1E-08 6.7E-13 113.2 7.3 84 234-320 545-631 (889)
43 KOG4658|consensus 98.6 3.9E-08 8.4E-13 112.4 6.3 312 232-578 521-856 (889)
44 KOG1859|consensus 98.6 5.4E-10 1.2E-14 118.7 -8.2 128 442-584 165-295 (1096)
45 KOG2982|consensus 98.5 6.9E-08 1.5E-12 93.1 2.8 82 383-473 200-287 (418)
46 KOG2982|consensus 98.5 5.6E-08 1.2E-12 93.7 2.0 224 287-576 47-287 (418)
47 KOG4579|consensus 98.4 1.3E-08 2.8E-13 87.2 -2.7 90 499-588 53-143 (177)
48 KOG1859|consensus 98.4 2.6E-09 5.7E-14 113.6 -8.7 158 230-399 105-296 (1096)
49 KOG4579|consensus 98.4 1.3E-08 2.9E-13 87.2 -3.8 112 460-582 48-160 (177)
50 PF12799 LRR_4: Leucine Rich r 98.3 5.9E-07 1.3E-11 62.6 3.5 36 524-559 3-38 (44)
51 PF12799 LRR_4: Leucine Rich r 98.3 6.2E-07 1.4E-11 62.5 3.3 41 545-585 1-41 (44)
52 KOG1644|consensus 98.2 3.5E-06 7.6E-11 77.3 5.9 82 233-316 63-149 (233)
53 KOG2120|consensus 98.1 1.8E-07 3.9E-12 90.3 -3.5 133 234-372 185-325 (419)
54 PRK15386 type III secretion pr 98.1 1.2E-05 2.7E-10 83.1 9.4 136 359-533 51-188 (426)
55 KOG2120|consensus 98.1 1.7E-07 3.7E-12 90.4 -4.1 106 338-451 187-296 (419)
56 KOG1644|consensus 98.0 1.1E-05 2.5E-10 74.0 6.8 88 283-375 40-128 (233)
57 COG5238 RNA1 Ran GTPase-activa 98.0 5.2E-07 1.1E-11 86.1 -2.3 114 441-560 185-318 (388)
58 COG5238 RNA1 Ran GTPase-activa 98.0 3.1E-06 6.8E-11 80.9 2.8 169 170-375 29-229 (388)
59 PF13306 LRR_5: Leucine rich r 97.9 2.2E-05 4.8E-10 68.9 6.9 123 227-363 5-129 (129)
60 PRK15386 type III secretion pr 97.9 2.6E-05 5.7E-10 80.7 8.3 82 404-517 49-133 (426)
61 PF13306 LRR_5: Leucine rich r 97.7 7.1E-05 1.5E-09 65.7 6.5 120 458-594 5-128 (129)
62 KOG2739|consensus 97.4 9.3E-05 2E-09 71.0 2.9 94 226-322 35-131 (260)
63 KOG3665|consensus 97.4 0.00013 2.7E-09 81.9 4.2 120 336-459 148-268 (699)
64 KOG2123|consensus 97.4 1E-05 2.3E-10 77.6 -4.2 82 233-321 18-102 (388)
65 KOG3665|consensus 97.3 0.00022 4.8E-09 80.0 4.9 107 440-558 147-263 (699)
66 KOG2123|consensus 97.1 2.7E-05 5.8E-10 74.9 -4.0 103 255-366 16-123 (388)
67 KOG2739|consensus 97.1 0.00038 8.3E-09 66.8 3.7 79 497-575 63-150 (260)
68 KOG4341|consensus 97.0 4.2E-05 9.2E-10 77.6 -4.3 79 497-575 370-459 (483)
69 PF00560 LRR_1: Leucine Rich R 95.9 0.0024 5.3E-08 37.1 0.4 14 548-561 3-16 (22)
70 PF00560 LRR_1: Leucine Rich R 95.9 0.0032 6.9E-08 36.6 0.7 19 524-542 2-20 (22)
71 KOG0473|consensus 95.6 0.0003 6.4E-09 66.2 -6.7 86 496-581 39-124 (326)
72 smart00369 LRR_TYP Leucine-ric 95.1 0.018 3.9E-07 34.9 2.2 23 567-589 1-23 (26)
73 smart00370 LRR Leucine-rich re 95.1 0.018 3.9E-07 34.9 2.2 23 567-589 1-23 (26)
74 PF13504 LRR_7: Leucine rich r 94.9 0.016 3.6E-07 31.2 1.4 13 547-559 3-15 (17)
75 PF13504 LRR_7: Leucine rich r 94.4 0.025 5.4E-07 30.5 1.3 16 523-538 2-17 (17)
76 KOG4341|consensus 94.1 0.0054 1.2E-07 62.7 -2.8 106 441-551 346-458 (483)
77 KOG4308|consensus 94.1 0.00099 2.1E-08 71.7 -8.7 140 442-583 145-305 (478)
78 KOG0473|consensus 93.9 0.002 4.3E-08 60.8 -5.9 87 461-558 38-124 (326)
79 KOG4308|consensus 93.3 0.00087 1.9E-08 72.1 -11.0 37 499-535 262-303 (478)
80 smart00370 LRR Leucine-rich re 93.2 0.072 1.6E-06 32.1 2.0 21 234-254 2-22 (26)
81 smart00369 LRR_TYP Leucine-ric 93.2 0.072 1.6E-06 32.1 2.0 21 234-254 2-22 (26)
82 smart00364 LRR_BAC Leucine-ric 87.0 0.4 8.8E-06 28.9 1.4 18 545-562 2-19 (26)
83 KOG3864|consensus 86.6 0.14 2.9E-06 47.8 -1.2 83 235-318 102-187 (221)
84 KOG4242|consensus 84.8 4.9 0.00011 42.4 8.8 64 307-373 214-281 (553)
85 smart00365 LRR_SD22 Leucine-ri 84.0 0.93 2E-05 27.4 2.0 14 286-299 3-16 (26)
86 smart00365 LRR_SD22 Leucine-ri 82.5 1.2 2.5E-05 27.0 2.0 18 257-274 1-18 (26)
87 KOG1947|consensus 81.7 0.34 7.4E-06 52.4 -0.9 78 498-575 242-328 (482)
88 smart00364 LRR_BAC Leucine-ric 81.4 1.1 2.3E-05 27.1 1.5 16 337-352 3-18 (26)
89 KOG3763|consensus 78.3 1.2 2.6E-05 47.7 1.9 64 256-320 216-283 (585)
90 KOG3864|consensus 77.3 0.44 9.6E-06 44.5 -1.5 82 442-531 102-185 (221)
91 KOG1947|consensus 75.5 0.89 1.9E-05 49.1 -0.0 87 494-580 209-307 (482)
92 KOG3763|consensus 74.9 1.5 3.2E-05 47.1 1.4 61 497-558 216-283 (585)
93 PF13516 LRR_6: Leucine Rich r 74.1 1.4 3.1E-05 25.8 0.6 14 568-581 2-15 (24)
94 KOG4242|consensus 72.1 31 0.00067 36.7 10.0 86 234-320 214-312 (553)
95 smart00368 LRR_RI Leucine rich 60.2 6.4 0.00014 24.1 1.6 14 569-582 3-16 (28)
96 PF00415 RCC1: Regulator of ch 46.8 5.1 0.00011 28.2 -0.5 31 6-51 5-35 (51)
97 TIGR00864 PCC polycystin catio 42.6 16 0.00034 47.2 2.3 32 240-271 1-32 (2740)
98 TIGR00864 PCC polycystin catio 39.3 20 0.00043 46.3 2.6 32 313-349 1-32 (2740)
99 smart00367 LRR_CC Leucine-rich 20.2 73 0.0016 18.8 1.5 12 258-269 2-13 (26)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.9e-38 Score=368.21 Aligned_cols=436 Identities=21% Similarity=0.220 Sum_probs=276.2
Q ss_pred hhhhccCccEEecCCCCCc-ccChhh---hccCcEEEccCccccccccccccCCCCCccccCCCCc-------ccccccc
Q psy6452 145 NTVKTEALSTRTFCDHELQ-SIEDDI---LVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDND-------QNTKVTN 213 (594)
Q Consensus 145 ~~~~~~~L~~l~l~~n~l~-~ip~~~---l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~-------~~~~~~~ 213 (594)
...+..+|+.+++++|+++ .+|..+ +++|++|+|++|++++..+...+..+..+.+...... ....-+.
T Consensus 88 ~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 167 (968)
T PLN00113 88 AIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLK 167 (968)
T ss_pred HHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCC
Confidence 3344556666666666664 566554 4566666666666665544444444444433332221 1112234
Q ss_pred cccccccccccccccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcC
Q psy6452 214 AMDIAMELIDTELNCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLS 293 (594)
Q Consensus 214 ~~~l~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls 293 (594)
.++++.|.+.+.++..+.++++|++|+|++|.++...+..+..+++|++|+|++|.+++ .+|. .++.+++|++|+++
T Consensus 168 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~--~~p~-~l~~l~~L~~L~L~ 244 (968)
T PLN00113 168 VLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG--EIPY-EIGGLTSLNHLDLV 244 (968)
T ss_pred EEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCC--cCCh-hHhcCCCCCEEECc
Confidence 45555666666666666777777777777777765555556677777777777777654 2333 34667777777777
Q ss_pred CCCCC-CCC-CcCCCcCccEEeccCCcccc-CchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCC
Q psy6452 294 HNKLS-ELP-DFLNFKVLKELDISHNNFES-MPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHN 370 (594)
Q Consensus 294 ~N~l~-~lp-~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N 370 (594)
+|.++ .+| .|.++++|++|++++|.+++ +|..+... .+|+.|++++|.+....+..+.++++|+.|++++|
T Consensus 245 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l------~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n 318 (968)
T PLN00113 245 YNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSL------QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSN 318 (968)
T ss_pred CceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhc------cCcCEEECcCCeeccCCChhHcCCCCCcEEECCCC
Confidence 77766 444 46677777777777777764 45444322 46777777777776555555566777777777777
Q ss_pred CCCCCCCcc--ccCCccEEeCCCCCCC-CCCchhhhcccCcccEEECcCCCCccCCccHHHhhhccc-------------
Q psy6452 371 QIKILHKPR--CTHTLQTFSMNHNIGM-KIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMEL------------- 434 (594)
Q Consensus 371 ~l~~l~~~~--~~~~L~~L~L~~N~~~-~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~------------- 434 (594)
.+++..+.. ..++|+.|++++|.+. .+|..+ ..+++|+.|++++|+ +.+.+|.++.....+
T Consensus 319 ~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l--~~~~~L~~L~Ls~n~-l~~~~p~~~~~~~~L~~L~l~~n~l~~~ 395 (968)
T PLN00113 319 NFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNL--GKHNNLTVLDLSTNN-LTGEIPEGLCSSGNLFKLILFSNSLEGE 395 (968)
T ss_pred ccCCcCChhHhcCCCCCEEECcCCCCcCcCChHH--hCCCCCcEEECCCCe-eEeeCChhHhCcCCCCEEECcCCEeccc
Confidence 776544332 2346777777777554 445443 566677777777653 455555544321111
Q ss_pred --ccccccCCCcEEEcCCccccccCccccccCCCcceEeCCCCcCcccccccc--------------cccccCcccccCC
Q psy6452 435 --KENGVFSNLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFV--------------NVLWELPLSILYL 498 (594)
Q Consensus 435 --~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~--------------n~~~~ip~~~~~l 498 (594)
..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+........ +..+.+|..+ ..
T Consensus 396 ~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~ 474 (968)
T PLN00113 396 IPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GS 474 (968)
T ss_pred CCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-cc
Confidence 112345677777777777777777777777777777777764432211000 2233444433 34
Q ss_pred CCCcEEeCccccCc-cccccccCCCCCcEEEccCCCCc-ccCccccCCCCCCEEECcCCCCC-ccCcccccCCCCcEEEc
Q psy6452 499 SSIQELHLSNVQLN-CIPEDIGNLICLEKLNISHNKVY-KLPESFANLKSLKILDVSYNKLT-MLPDGFVMLSNLTTFYA 575 (594)
Q Consensus 499 ~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~ip~~l~~l~~L~~L~L 575 (594)
++|+.|++++|+++ .+|..+..+++|+.|+|++|++. .+|..+..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 554 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDL 554 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEEC
Confidence 67888888888887 66777888899999999999998 56778889999999999999998 67888999999999999
Q ss_pred cCCCCcccCHhHHhhhhC
Q psy6452 576 QRKYWMFLTISLLCYLMG 593 (594)
Q Consensus 576 ~~N~l~~l~~~~~~~l~~ 593 (594)
++|+++..-+..+..+.+
T Consensus 555 s~N~l~~~~p~~l~~l~~ 572 (968)
T PLN00113 555 SQNQLSGEIPKNLGNVES 572 (968)
T ss_pred CCCcccccCChhHhcCcc
Confidence 999998544455554443
No 2
>KOG4194|consensus
Probab=100.00 E-value=2.4e-40 Score=336.81 Aligned_cols=344 Identities=20% Similarity=0.240 Sum_probs=217.8
Q ss_pred EEecCCCCCcccChhh---hccCcEEEccCccccccccccccCCCCCccccCCCCcccccccccccccccccccccccCc
Q psy6452 154 TRTFCDHELQSIEDDI---LVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDNDQNTKVTNAMDIAMELIDTELNCCN 230 (594)
Q Consensus 154 ~l~l~~n~l~~ip~~~---l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~~ 230 (594)
.+++++|+|.+|.... +++|+++++.+|.++.++ .+.
T Consensus 82 ~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP---------~f~------------------------------- 121 (873)
T KOG4194|consen 82 TLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIP---------RFG------------------------------- 121 (873)
T ss_pred eeeccccccccCcHHHHhcCCcceeeeeccchhhhcc---------ccc-------------------------------
Confidence 4666666666666553 556666666666666655 111
Q ss_pred cCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCC--CcCCCcC
Q psy6452 231 KQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELP--DFLNFKV 308 (594)
Q Consensus 231 ~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp--~~~~l~~ 308 (594)
....+|+.|+|.+|.|+.+....++.++.|+.||||.|.|+ +++...|..-.++++|+|++|+|+.+. .|.++.+
T Consensus 122 ~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is---~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lns 198 (873)
T KOG4194|consen 122 HESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLIS---EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNS 198 (873)
T ss_pred ccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhh---cccCCCCCCCCCceEEeeccccccccccccccccch
Confidence 11245677777777777777666666777777777777733 345555555566777777777777554 4666667
Q ss_pred ccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCcccc--CCccE
Q psy6452 309 LKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPRCT--HTLQT 386 (594)
Q Consensus 309 L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~ 386 (594)
|.+|.|+.|+++.+|...+..+ ++|+.|+|..|+|..+....|.++++|+.|.|..|.|..+..+.|. .++++
T Consensus 199 L~tlkLsrNrittLp~r~Fk~L-----~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~ 273 (873)
T KOG4194|consen 199 LLTLKLSRNRITTLPQRSFKRL-----PKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEH 273 (873)
T ss_pred heeeecccCcccccCHHHhhhc-----chhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccce
Confidence 7777777777777766555422 4666667777766666666666666677676766666666666553 35555
Q ss_pred EeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccccCCC
Q psy6452 387 FSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLKYLKN 466 (594)
Q Consensus 387 L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 466 (594)
|+|+.|.+..+... .+.++..|+.|++++|.|..+.++.++..++
T Consensus 274 l~L~~N~l~~vn~g-----------------------------------~lfgLt~L~~L~lS~NaI~rih~d~Wsftqk 318 (873)
T KOG4194|consen 274 LNLETNRLQAVNEG-----------------------------------WLFGLTSLEQLDLSYNAIQRIHIDSWSFTQK 318 (873)
T ss_pred eecccchhhhhhcc-----------------------------------cccccchhhhhccchhhhheeecchhhhccc
Confidence 55555554444332 2233455666666666666666666777777
Q ss_pred cceEeCCCCcCcccccccccccccCc-ccccCCCCCcEEeCccccCcccccc-ccCCCCCcEEEccCCCCcc-cC---cc
Q psy6452 467 IKYLNCSNDIDHRKSQDFVNVLWELP-LSILYLSSIQELHLSNVQLNCIPED-IGNLICLEKLNISHNKVYK-LP---ES 540 (594)
Q Consensus 467 L~~L~Ls~n~~~~~~~~~~n~~~~ip-~~~~~l~~L~~L~Ls~N~l~~ip~~-~~~l~~L~~L~Ls~N~l~~-lp---~~ 540 (594)
|+.|+|++| .+..++ .+|..+..|++|+|++|.|+.+.+. |..+++|+.|||++|.|+. |. ..
T Consensus 319 L~~LdLs~N-----------~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~ 387 (873)
T KOG4194|consen 319 LKELDLSSN-----------RITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVA 387 (873)
T ss_pred ceeEecccc-----------ccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhh
Confidence 777777764 333333 3455666777777777777766554 6677777777777777762 21 24
Q ss_pred ccCCCCCCEEECcCCCCCccCcc-cccCCCCcEEEccCCCCcccCHhHHhhh
Q psy6452 541 FANLKSLKILDVSYNKLTMLPDG-FVMLSNLTTFYAQRKYWMFLTISLLCYL 591 (594)
Q Consensus 541 ~~~l~~L~~L~Ls~N~l~~ip~~-l~~l~~L~~L~L~~N~l~~l~~~~~~~l 591 (594)
|.++++|+.|++.+|+|..||.. |.++++|+.|+|.+|.|.+|.+.+|..|
T Consensus 388 f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m 439 (873)
T KOG4194|consen 388 FNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM 439 (873)
T ss_pred hccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc
Confidence 66677777777777777777655 7777777777777777777777777655
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.2e-36 Score=353.61 Aligned_cols=420 Identities=20% Similarity=0.200 Sum_probs=287.7
Q ss_pred ccEEecCCCCCcccC-hhh--hccCcEEEccCccccccccccccCCCCCccccCCCCccc--------cccccccccccc
Q psy6452 152 LSTRTFCDHELQSIE-DDI--LVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDNDQN--------TKVTNAMDIAME 220 (594)
Q Consensus 152 L~~l~l~~n~l~~ip-~~~--l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~~~--------~~~~~~~~l~~n 220 (594)
++.+++++|.++... ... +++|+.|+|++|++++..+...+..++.++..+++.+.. ..-...++++.|
T Consensus 71 v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n 150 (968)
T PLN00113 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNN 150 (968)
T ss_pred EEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCC
Confidence 457788888875443 333 889999999999998755554444445544444333222 233566777888
Q ss_pred ccccccccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCC-C
Q psy6452 221 LIDTELNCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLS-E 299 (594)
Q Consensus 221 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~-~ 299 (594)
.+.+.++..+..+++|++|+|++|.+....+..|.++++|++|+|++|.+++ .+| ..+..+++|++|+|++|.++ .
T Consensus 151 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p-~~l~~l~~L~~L~L~~n~l~~~ 227 (968)
T PLN00113 151 MLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVG--QIP-RELGQMKSLKWIYLGYNNLSGE 227 (968)
T ss_pred cccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcC--cCC-hHHcCcCCccEEECcCCccCCc
Confidence 8888888888889999999999998886666667889999999999998765 244 44578899999999999887 5
Q ss_pred CC-CcCCCcCccEEeccCCcccc-CchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCC
Q psy6452 300 LP-DFLNFKVLKELDISHNNFES-MPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHK 377 (594)
Q Consensus 300 lp-~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 377 (594)
+| .+.++++|++|++++|.+++ +|..+... .+|+.|++++|.+.+..+..+.++++|++|++++|.+++..+
T Consensus 228 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l------~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p 301 (968)
T PLN00113 228 IPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL------KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP 301 (968)
T ss_pred CChhHhcCCCCCEEECcCceeccccChhHhCC------CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCC
Confidence 66 57888999999999998885 66554332 688999999999886555555688899999999998876544
Q ss_pred c--cccCCccEEeCCCCCCC-CCCchhhhcccCcccEEECcCCCCccCCccHHHhhhccccc---------------ccc
Q psy6452 378 P--RCTHTLQTFSMNHNIGM-KIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKE---------------NGV 439 (594)
Q Consensus 378 ~--~~~~~L~~L~L~~N~~~-~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~---------------~~~ 439 (594)
. ...++|+.|++++|.+. .+|..+ ..+++|+.|++++|. +.+.+|..+.....+.. +..
T Consensus 302 ~~~~~l~~L~~L~l~~n~~~~~~~~~~--~~l~~L~~L~L~~n~-l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~ 378 (968)
T PLN00113 302 ELVIQLQNLEILHLFSNNFTGKIPVAL--TSLPRLQVLQLWSNK-FSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCS 378 (968)
T ss_pred hhHcCCCCCcEEECCCCccCCcCChhH--hcCCCCCEEECcCCC-CcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhC
Confidence 3 23468999999998665 445444 688999999999875 66777765533211100 112
Q ss_pred cCCCcEEEcCCccccccCccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCc-cccccc
Q psy6452 440 FSNLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLN-CIPEDI 518 (594)
Q Consensus 440 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 518 (594)
+.+|+.|++++|.+.+..+..+..+++|+.|++++| +..+.+|..+..+++|+.|++++|.++ .+|..+
T Consensus 379 ~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n----------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 448 (968)
T PLN00113 379 SGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN----------SFSGELPSEFTKLPLVYFLDISNNNLQGRINSRK 448 (968)
T ss_pred cCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCC----------EeeeECChhHhcCCCCCEEECcCCcccCccChhh
Confidence 233444444444444444444444444555555444 344455666666666666666666666 344445
Q ss_pred cCCCCCcEEEccCCCCc-ccCccccCCCCCCEEECcCCCCC-ccCcccccCCCCcEEEccCCCCcccCHhHHhhhhCC
Q psy6452 519 GNLICLEKLNISHNKVY-KLPESFANLKSLKILDVSYNKLT-MLPDGFVMLSNLTTFYAQRKYWMFLTISLLCYLMGL 594 (594)
Q Consensus 519 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~ip~~l~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L 594 (594)
..+++|+.|+|++|++. .+|..+ ..++|+.|++++|+++ .+|..+..+++|+.|+|++|.++...+..+..+.+|
T Consensus 449 ~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 525 (968)
T PLN00113 449 WDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKL 525 (968)
T ss_pred ccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCC
Confidence 66677777777777766 334433 4467888888888887 567778888888888888888886666666555543
No 4
>KOG4194|consensus
Probab=100.00 E-value=5.3e-38 Score=319.77 Aligned_cols=351 Identities=21% Similarity=0.274 Sum_probs=255.9
Q ss_pred eeceecccccccch-hhhccCccEEecCCCCCcccChhh--hccCcEEEccCccccccccccccCCCCCccccCCCCccc
Q psy6452 132 QDTITNNSVEMDEN-TVKTEALSTRTFCDHELQSIEDDI--LVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDNDQN 208 (594)
Q Consensus 132 ~~~~~n~~~~~~~~-~~~~~~L~~l~l~~n~l~~ip~~~--l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~~~ 208 (594)
.+...|....+... ...+.+|+...+..|.++.||... ..+|+.|+|.+|.|+.+..+ .+
T Consensus 83 LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~~N~I~sv~se-------~L---------- 145 (873)
T KOG4194|consen 83 LDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLRHNLISSVTSE-------EL---------- 145 (873)
T ss_pred eeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeeeccccccccHH-------HH----------
Confidence 33334444444444 455679999999999999999887 56699999999999987622 11
Q ss_pred ccccccccccccccccccccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCC
Q psy6452 209 TKVTNAMDIAMELIDTELNCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLI 288 (594)
Q Consensus 209 ~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~ 288 (594)
.-++.|++||||.|.|+.++...|..-.++++|+|++|+|+. +..+.|..+.+|.
T Consensus 146 ----------------------~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~---l~~~~F~~lnsL~ 200 (873)
T KOG4194|consen 146 ----------------------SALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITT---LETGHFDSLNSLL 200 (873)
T ss_pred ----------------------HhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccc---cccccccccchhe
Confidence 236889999999999999999999888899999999999666 5678899999999
Q ss_pred EEEcCCCCCCCCC--CcCCCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEE
Q psy6452 289 VLDLSHNKLSELP--DFLNFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLD 366 (594)
Q Consensus 289 ~L~Ls~N~l~~lp--~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~ 366 (594)
.|.|+.|+|+.+| .|.++++|+.|+|..|+|..+..-.+ +-.++|+.|.|..|.+..+..++|.++.++++|+
T Consensus 201 tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltF-----qgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~ 275 (873)
T KOG4194|consen 201 TLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTF-----QGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLN 275 (873)
T ss_pred eeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhh-----cCchhhhhhhhhhcCcccccCcceeeecccceee
Confidence 9999999999999 58889999999999999986543333 3337999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccc--cCCccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCc
Q psy6452 367 ISHNQIKILHKPRC--THTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLI 444 (594)
Q Consensus 367 Ls~N~l~~l~~~~~--~~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~ 444 (594)
|+.|+++.+..+.. ..+|+.|++++|.|..|....| .-+++|++|+|++
T Consensus 276 L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~W-sftqkL~~LdLs~---------------------------- 326 (873)
T KOG4194|consen 276 LETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSW-SFTQKLKELDLSS---------------------------- 326 (873)
T ss_pred cccchhhhhhcccccccchhhhhccchhhhheeecchh-hhcccceeEeccc----------------------------
Confidence 99999998876643 3588999999998887766554 3445555555555
Q ss_pred EEEcCCccccccCccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCc-ccc---ccccC
Q psy6452 445 SLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLN-CIP---EDIGN 520 (594)
Q Consensus 445 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~-~ip---~~~~~ 520 (594)
|+++...++.|..+..|+.|+|+.|.+....+ ..|..+++|+.|||++|.|+ .|. ..|.+
T Consensus 327 ------N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e----------~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g 390 (873)
T KOG4194|consen 327 ------NRITRLDEGSFRVLSQLEELNLSHNSIDHLAE----------GAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG 390 (873)
T ss_pred ------cccccCChhHHHHHHHhhhhcccccchHHHHh----------hHHHHhhhhhhhcCcCCeEEEEEecchhhhcc
Confidence 44555555555555566666666542222111 13344556666666666665 221 12556
Q ss_pred CCCCcEEEccCCCCcccCc-cccCCCCCCEEECcCCCCCcc-CcccccCCCCcEEEc
Q psy6452 521 LICLEKLNISHNKVYKLPE-SFANLKSLKILDVSYNKLTML-PDGFVMLSNLTTFYA 575 (594)
Q Consensus 521 l~~L~~L~Ls~N~l~~lp~-~~~~l~~L~~L~Ls~N~l~~i-p~~l~~l~~L~~L~L 575 (594)
+++|+.|+|.+|+|++||. +|.++.+|++|||.+|.|.+| |.+|..+ .|++|-+
T Consensus 391 l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 391 LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred chhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 6666666666666666655 666666666666666666655 4446555 5665554
No 5
>KOG0472|consensus
Probab=100.00 E-value=1.2e-36 Score=297.93 Aligned_cols=416 Identities=21% Similarity=0.255 Sum_probs=279.7
Q ss_pred cccccchhhhccCccEEecCCCCCcccChhh--hccCcEEEccCccccccccc-cccCCCCCccccCCCCccc-ccccc-
Q psy6452 139 SVEMDENTVKTEALSTRTFCDHELQSIEDDI--LVQLECLHIDNNKAQEYIVS-MNVDRTPGFKLQNNDNDQN-TKVTN- 213 (594)
Q Consensus 139 ~~~~~~~~~~~~~L~~l~l~~n~l~~ip~~~--l~~L~~L~Ls~N~i~~~~~~-~~~~~l~~l~~~~~~~~~~-~~~~~- 213 (594)
...+.........+..+.+.+|++..+|+.+ +..++.|+.++|+++.+++. .....+..+.+++...... ..+..
T Consensus 57 l~~l~~dl~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~~ 136 (565)
T KOG0472|consen 57 LEVLREDLKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELKELPDSIGRL 136 (565)
T ss_pred hhhccHhhhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccceeecCchHHHH
Confidence 3444444444555666666666666666666 66666666666666665543 2222333333322221111 01111
Q ss_pred ----cccccccccccccccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCE
Q psy6452 214 ----AMDIAMELIDTELNCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIV 289 (594)
Q Consensus 214 ----~~~l~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~ 289 (594)
.++...|.+ ..+|..+..+.++..+++.+|++..+++.... |+.|++||...|.++ .+|+.+ +++.+|+.
T Consensus 137 ~~l~dl~~~~N~i-~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~---tlP~~l-g~l~~L~~ 210 (565)
T KOG0472|consen 137 LDLEDLDATNNQI-SSLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE---TLPPEL-GGLESLEL 210 (565)
T ss_pred hhhhhhhcccccc-ccCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh---cCChhh-cchhhhHH
Confidence 111222333 34566666778888888888888888888765 888888888888844 467766 68888888
Q ss_pred EEcCCCCCCCCCCcCCCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCC
Q psy6452 290 LDLSHNKLSELPDFLNFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISH 369 (594)
Q Consensus 290 L~Ls~N~l~~lp~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~ 369 (594)
|+|.+|+|..+|+|.++..|++|+++.|.|..+|+.....+ .++..||+..|+++++|..+. -+.+|+.||+|+
T Consensus 211 LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L-----~~l~vLDLRdNklke~Pde~c-lLrsL~rLDlSN 284 (565)
T KOG0472|consen 211 LYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPAEHLKHL-----NSLLVLDLRDNKLKEVPDEIC-LLRSLERLDLSN 284 (565)
T ss_pred HHhhhcccccCCCCCccHHHHHHHhcccHHHhhHHHHhccc-----ccceeeeccccccccCchHHH-HhhhhhhhcccC
Confidence 88999988888888888888888888888888887765433 678888888888888887774 677788888888
Q ss_pred CCCCCCCCccccCCccEEeCCCCCCCCCCchhhhcc----------------------------------------cCcc
Q psy6452 370 NQIKILHKPRCTHTLQTFSMNHNIGMKIPEWFWYQE----------------------------------------FLCL 409 (594)
Q Consensus 370 N~l~~l~~~~~~~~L~~L~L~~N~~~~ip~~~~~~~----------------------------------------~~~L 409 (594)
|.|++++..-..-.|+.|.+.+|.+.+|-..+..+. ..+.
T Consensus 285 N~is~Lp~sLgnlhL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~t 364 (565)
T KOG0472|consen 285 NDISSLPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITT 364 (565)
T ss_pred CccccCCcccccceeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhh
Confidence 888877655332266666667766555544321000 0112
Q ss_pred cEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCcc-----------------------ccccCccccccCCC
Q psy6452 410 KELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTA-----------------------AVMSNVSQLKYLKN 466 (594)
Q Consensus 410 ~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~-----------------------l~~~~~~~~~~l~~ 466 (594)
+.|++++- ....+|.-++.... -.-.+..+++.|+ ..+..+..++.+++
T Consensus 365 kiL~~s~~--qlt~VPdEVfea~~------~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~k 436 (565)
T KOG0472|consen 365 KILDVSDK--QLTLVPDEVFEAAK------SEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQK 436 (565)
T ss_pred hhhccccc--ccccCCHHHHHHhh------hcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhc
Confidence 22222221 12223332222111 0112233333332 23344566777888
Q ss_pred cceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccCc-cccCCC
Q psy6452 467 IKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLPE-SFANLK 545 (594)
Q Consensus 467 L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~-~~~~l~ 545 (594)
|..|++++ |++-.+|..++.+..|+.|+++.|++..+|..+..+..|+.+-.++|++.++++ .+.+|.
T Consensus 437 Lt~L~L~N-----------N~Ln~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~ 505 (565)
T KOG0472|consen 437 LTFLDLSN-----------NLLNDLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMR 505 (565)
T ss_pred ceeeeccc-----------chhhhcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhh
Confidence 88888888 678888888888888999999999888888888888888888888899998876 489999
Q ss_pred CCCEEECcCCCCCccCcccccCCCCcEEEccCCCCcccCHh
Q psy6452 546 SLKILDVSYNKLTMLPDGFVMLSNLTTFYAQRKYWMFLTIS 586 (594)
Q Consensus 546 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~l~~~ 586 (594)
+|..|||.+|.|..||..++++++|++|.++||+|+ .|..
T Consensus 506 nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr-~Pr~ 545 (565)
T KOG0472|consen 506 NLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR-QPRH 545 (565)
T ss_pred hcceeccCCCchhhCChhhccccceeEEEecCCccC-CCHH
Confidence 999999999999999999999999999999999999 6654
No 6
>KOG0472|consensus
Probab=99.97 E-value=8.9e-35 Score=284.85 Aligned_cols=423 Identities=21% Similarity=0.280 Sum_probs=318.5
Q ss_pred hhccCccEEecCCCCCcccChhh--hccCcEEEccCccccccccc-cccCCCCCccccCCCCcccccc------cccccc
Q psy6452 147 VKTEALSTRTFCDHELQSIEDDI--LVQLECLHIDNNKAQEYIVS-MNVDRTPGFKLQNNDNDQNTKV------TNAMDI 217 (594)
Q Consensus 147 ~~~~~L~~l~l~~n~l~~ip~~~--l~~L~~L~Ls~N~i~~~~~~-~~~~~l~~l~~~~~~~~~~~~~------~~~~~l 217 (594)
+....+..+.+++|.++.+-++. +..|.+|++.+|++...++. .....+..+...+......... ..-++.
T Consensus 42 W~qv~l~~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 42 WEQVDLQKLILSHNDLEVLREDLKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDC 121 (565)
T ss_pred hhhcchhhhhhccCchhhccHhhhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhc
Confidence 33445668889999999999888 88999999999999998865 3333344443333322222110 111222
Q ss_pred cccccccccccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCC
Q psy6452 218 AMELIDTELNCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKL 297 (594)
Q Consensus 218 ~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l 297 (594)
+.|.. ..++..+..+..+..++..+|+|+.+|+++ ..+.+|..|++.+|++.. +|+.... ++.|++||..+|-+
T Consensus 122 s~n~~-~el~~~i~~~~~l~dl~~~~N~i~slp~~~-~~~~~l~~l~~~~n~l~~---l~~~~i~-m~~L~~ld~~~N~L 195 (565)
T KOG0472|consen 122 SSNEL-KELPDSIGRLLDLEDLDATNNQISSLPEDM-VNLSKLSKLDLEGNKLKA---LPENHIA-MKRLKHLDCNSNLL 195 (565)
T ss_pred cccce-eecCchHHHHhhhhhhhccccccccCchHH-HHHHHHHHhhccccchhh---CCHHHHH-HHHHHhcccchhhh
Confidence 22222 234555666777888888888888888776 477788888888888544 5666654 88899999999988
Q ss_pred CCCC-CcCCCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCC
Q psy6452 298 SELP-DFLNFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILH 376 (594)
Q Consensus 298 ~~lp-~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~ 376 (594)
..+| +++++.+|..|+|.+|++..+|+. .....|++|+++.|+|+.+|+....+++++.+||+.+|+++.++
T Consensus 196 ~tlP~~lg~l~~L~~LyL~~Nki~~lPef-------~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~P 268 (565)
T KOG0472|consen 196 ETLPPELGGLESLELLYLRRNKIRFLPEF-------PGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVP 268 (565)
T ss_pred hcCChhhcchhhhHHHHhhhcccccCCCC-------CccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCc
Confidence 8888 688889999999999999988832 22257899999999999999999999999999999999999999
Q ss_pred Ccccc-CCccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhh------------------------
Q psy6452 377 KPRCT-HTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNH------------------------ 431 (594)
Q Consensus 377 ~~~~~-~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~------------------------ 431 (594)
...+. .+|.+||+++|.++.+|... +++ .|+.|.+-||. ...+-..+.+.
T Consensus 269 de~clLrsL~rLDlSNN~is~Lp~sL--gnl-hL~~L~leGNP--lrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~ 343 (565)
T KOG0472|consen 269 DEICLLRSLERLDLSNNDISSLPYSL--GNL-HLKFLALEGNP--LRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGG 343 (565)
T ss_pred hHHHHhhhhhhhcccCCccccCCccc--ccc-eeeehhhcCCc--hHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccc
Confidence 88665 57999999999999999987 566 89999999875 11111111100
Q ss_pred --c-------ccccccccCCCcEEEcCCccccccCccccccCC--CcceEeCCCCcCcccccccc-------------cc
Q psy6452 432 --M-------ELKENGVFSNLISLHMQNTAAVMSNVSQLKYLK--NIKYLNCSNDIDHRKSQDFV-------------NV 487 (594)
Q Consensus 432 --~-------~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~Ls~n~~~~~~~~~~-------------n~ 487 (594)
. .+.....+.+.+.|++++-+++.+..+.|..-. -.+..+++.|.+.....++. |.
T Consensus 344 ~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~ 423 (565)
T KOG0472|consen 344 TETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNK 423 (565)
T ss_pred ccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCc
Confidence 0 001112344677788888888777666664332 35677777775543322211 56
Q ss_pred cccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccCccccCCCCCCEEECcCCCCCccCcc-ccc
Q psy6452 488 LWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLPESFANLKSLKILDVSYNKLTMLPDG-FVM 566 (594)
Q Consensus 488 ~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~ip~~-l~~ 566 (594)
++-+|..++.+++|..|+|++|-+.++|..++.+..|+.|++|.|++..+|..+..+..|+.+-.++|++..++.. +..
T Consensus 424 isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~n 503 (565)
T KOG0472|consen 424 ISFVPLELSQLQKLTFLDLSNNLLNDLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKN 503 (565)
T ss_pred cccchHHHHhhhcceeeecccchhhhcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhh
Confidence 6777888889999999999999999999999999999999999999999999888888899999999999999766 999
Q ss_pred CCCCcEEEccCCCCcccCHhH
Q psy6452 567 LSNLTTFYAQRKYWMFLTISL 587 (594)
Q Consensus 567 l~~L~~L~L~~N~l~~l~~~~ 587 (594)
+.+|++|||.+|.+.+||+.+
T Consensus 504 m~nL~tLDL~nNdlq~IPp~L 524 (565)
T KOG0472|consen 504 MRNLTTLDLQNNDLQQIPPIL 524 (565)
T ss_pred hhhcceeccCCCchhhCChhh
Confidence 999999999999999999865
No 7
>KOG0444|consensus
Probab=99.97 E-value=7.2e-34 Score=291.13 Aligned_cols=321 Identities=24% Similarity=0.373 Sum_probs=242.3
Q ss_pred cCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCC-CcCCCcCc
Q psy6452 231 KQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELP-DFLNFKVL 309 (594)
Q Consensus 231 ~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp-~~~~l~~L 309 (594)
..+.+|++|.+++|++..+.... +.++.|+.+++.+|++.. ..+|+.+| .+..|+.||||+|+++.+| .+...+++
T Consensus 52 ~~lqkLEHLs~~HN~L~~vhGEL-s~Lp~LRsv~~R~N~LKn-sGiP~diF-~l~dLt~lDLShNqL~EvP~~LE~AKn~ 128 (1255)
T KOG0444|consen 52 SRLQKLEHLSMAHNQLISVHGEL-SDLPRLRSVIVRDNNLKN-SGIPTDIF-RLKDLTILDLSHNQLREVPTNLEYAKNS 128 (1255)
T ss_pred HHHhhhhhhhhhhhhhHhhhhhh-ccchhhHHHhhhcccccc-CCCCchhc-ccccceeeecchhhhhhcchhhhhhcCc
Confidence 34567777777777777776553 677777777777777754 24677776 6777777777777777777 46677777
Q ss_pred cEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCc--cccCCccEE
Q psy6452 310 KELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKP--RCTHTLQTF 387 (594)
Q Consensus 310 ~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~--~~~~~L~~L 387 (594)
-.|+||+|+|..||..++..+ ..|-.||||+|++..+|+.+ ..+..|++|+|++|.+...... ..+.+|++|
T Consensus 129 iVLNLS~N~IetIPn~lfinL-----tDLLfLDLS~NrLe~LPPQ~-RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vL 202 (1255)
T KOG0444|consen 129 IVLNLSYNNIETIPNSLFINL-----TDLLFLDLSNNRLEMLPPQI-RRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVL 202 (1255)
T ss_pred EEEEcccCccccCCchHHHhh-----HhHhhhccccchhhhcCHHH-HHHhhhhhhhcCCChhhHHHHhcCccchhhhhh
Confidence 777777777777776665433 45667777777777777776 3677777777877776543322 233467777
Q ss_pred eCCCC--CCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccccCC
Q psy6452 388 SMNHN--IGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLKYLK 465 (594)
Q Consensus 388 ~L~~N--~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 465 (594)
.+++. .+..+|..+ ..+.+|..+|+|.|+ .-.+|.++.+ +.+|+.|+|++|.++.... ..+.-.
T Consensus 203 hms~TqRTl~N~Ptsl--d~l~NL~dvDlS~N~--Lp~vPecly~---------l~~LrrLNLS~N~iteL~~-~~~~W~ 268 (1255)
T KOG0444|consen 203 HMSNTQRTLDNIPTSL--DDLHNLRDVDLSENN--LPIVPECLYK---------LRNLRRLNLSGNKITELNM-TEGEWE 268 (1255)
T ss_pred hcccccchhhcCCCch--hhhhhhhhccccccC--CCcchHHHhh---------hhhhheeccCcCceeeeec-cHHHHh
Confidence 77765 455667665 577788888888775 5556665533 4578888888888876532 233446
Q ss_pred CcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCc--cccccccCCCCCcEEEccCCCCcccCccccC
Q psy6452 466 NIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLN--CIPEDIGNLICLEKLNISHNKVYKLPESFAN 543 (594)
Q Consensus 466 ~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~--~ip~~~~~l~~L~~L~Ls~N~l~~lp~~~~~ 543 (594)
+|+.|++|. |.+..+|.++..+++|+.|.+.+|+++ .||+.++.+.+|+.+..++|.+.-+|+.+..
T Consensus 269 ~lEtLNlSr-----------NQLt~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElVPEglcR 337 (1255)
T KOG0444|consen 269 NLETLNLSR-----------NQLTVLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELVPEGLCR 337 (1255)
T ss_pred hhhhhcccc-----------chhccchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccccCchhhhh
Confidence 778888888 578889999999999999999999887 8999999999999999999999999999999
Q ss_pred CCCCCEEECcCCCCCccCcccccCCCCcEEEccCCCCcccCH
Q psy6452 544 LKSLKILDVSYNKLTMLPDGFVMLSNLTTFYAQRKYWMFLTI 585 (594)
Q Consensus 544 l~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~l~~ 585 (594)
+..|+.|.|+.|++-++|+++.-++.|+.|++..|+=-..|+
T Consensus 338 C~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 338 CVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred hHHHHHhcccccceeechhhhhhcCCcceeeccCCcCccCCC
Confidence 999999999999999999999999999999999998555554
No 8
>KOG0444|consensus
Probab=99.97 E-value=1.7e-33 Score=288.50 Aligned_cols=328 Identities=24% Similarity=0.362 Sum_probs=280.5
Q ss_pred ccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCC--CCC-Cc
Q psy6452 227 NCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLS--ELP-DF 303 (594)
Q Consensus 227 ~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~--~lp-~~ 303 (594)
|.....++.++.|.|...++..+|... +.+.+|++|.+++|++..+ . +-++.++.|+.+++.+|++. +|| ++
T Consensus 25 P~~v~qMt~~~WLkLnrt~L~~vPeEL-~~lqkLEHLs~~HN~L~~v---h-GELs~Lp~LRsv~~R~N~LKnsGiP~di 99 (1255)
T KOG0444|consen 25 PHDVEQMTQMTWLKLNRTKLEQVPEEL-SRLQKLEHLSMAHNQLISV---H-GELSDLPRLRSVIVRDNNLKNSGIPTDI 99 (1255)
T ss_pred chhHHHhhheeEEEechhhhhhChHHH-HHHhhhhhhhhhhhhhHhh---h-hhhccchhhHHHhhhccccccCCCCchh
Confidence 334456889999999999999999875 8999999999999997654 2 33478999999999999998 788 68
Q ss_pred CCCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCc-cccC
Q psy6452 304 LNFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKP-RCTH 382 (594)
Q Consensus 304 ~~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~-~~~~ 382 (594)
..+..|..||||+|+++.+|..+... .++-.|+||+|+|..||...|.+++-|-+||||+|++..+++. .-..
T Consensus 100 F~l~dLt~lDLShNqL~EvP~~LE~A------Kn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~ 173 (1255)
T KOG0444|consen 100 FRLKDLTILDLSHNQLREVPTNLEYA------KNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLS 173 (1255)
T ss_pred cccccceeeecchhhhhhcchhhhhh------cCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHHh
Confidence 89999999999999999999877543 5788999999999999999999999999999999999998876 4456
Q ss_pred CccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccc
Q psy6452 383 TLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLK 462 (594)
Q Consensus 383 ~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 462 (594)
.|++|.|++|.+..+.-.- ...+.+|+.|.+++.+.-...+|.++ ..+.+|..++++.|.+... |..+-
T Consensus 174 ~LqtL~Ls~NPL~hfQLrQ-LPsmtsL~vLhms~TqRTl~N~Ptsl---------d~l~NL~dvDlS~N~Lp~v-Pecly 242 (1255)
T KOG0444|consen 174 MLQTLKLSNNPLNHFQLRQ-LPSMTSLSVLHMSNTQRTLDNIPTSL---------DDLHNLRDVDLSENNLPIV-PECLY 242 (1255)
T ss_pred hhhhhhcCCChhhHHHHhc-CccchhhhhhhcccccchhhcCCCch---------hhhhhhhhccccccCCCcc-hHHHh
Confidence 8999999999443221111 12466888899998776677777654 4567899999999988654 67777
Q ss_pred cCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCc--ccCcc
Q psy6452 463 YLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVY--KLPES 540 (594)
Q Consensus 463 ~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~--~lp~~ 540 (594)
.+.+|+.|+||+| .++++..+.....+|++|+||+|+++.+|+.+..++.|+.|.+.+|+++ .||..
T Consensus 243 ~l~~LrrLNLS~N-----------~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeGiPSG 311 (1255)
T KOG0444|consen 243 KLRNLRRLNLSGN-----------KITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEGIPSG 311 (1255)
T ss_pred hhhhhheeccCcC-----------ceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccCCccc
Confidence 8999999999994 5667766777788999999999999999999999999999999999988 89999
Q ss_pred ccCCCCCCEEECcCCCCCccCcccccCCCCcEEEccCCCCcccCHhH
Q psy6452 541 FANLKSLKILDVSYNKLTMLPDGFVMLSNLTTFYAQRKYWMFLTISL 587 (594)
Q Consensus 541 ~~~l~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~l~~~~ 587 (594)
++.+.+|+++..++|.+.-+|+++..+..|+.|.|+.|.+-++|..+
T Consensus 312 IGKL~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrLiTLPeaI 358 (1255)
T KOG0444|consen 312 IGKLIQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRLITLPEAI 358 (1255)
T ss_pred hhhhhhhHHHHhhccccccCchhhhhhHHHHHhcccccceeechhhh
Confidence 99999999999999999999999999999999999999999998765
No 9
>KOG0618|consensus
Probab=99.97 E-value=3.8e-32 Score=290.90 Aligned_cols=420 Identities=24% Similarity=0.302 Sum_probs=324.9
Q ss_pred eeeceecccccccchhhhccCccEEecCCCCCcccChhh--hccCcEEEccCcccccccccccc-CCCCCccccCCCC--
Q psy6452 131 TQDTITNNSVEMDENTVKTEALSTRTFCDHELQSIEDDI--LVQLECLHIDNNKAQEYIVSMNV-DRTPGFKLQNNDN-- 205 (594)
Q Consensus 131 ~~~~~~n~~~~~~~~~~~~~~L~~l~l~~n~l~~ip~~~--l~~L~~L~Ls~N~i~~~~~~~~~-~~l~~l~~~~~~~-- 205 (594)
...+..|.....|.+.....+|.++.|.+|+++.+|..+ +.+|++||+|.|.+..++..... .....+...++..
T Consensus 72 ~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n~l~~lP~~~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~ 151 (1081)
T KOG0618|consen 72 QLNLSRNYIRSVPSSCSNMRNLQYLNLKNNRLQSLPASISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKIQ 151 (1081)
T ss_pred hcccchhhHhhCchhhhhhhcchhheeccchhhcCchhHHhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhhh
Confidence 344567777888888888899999999999999999998 99999999999999988754211 0000011110100
Q ss_pred -cccccccccccccccccccccccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcC
Q psy6452 206 -DQNTKVTNAMDIAMELIDTELNCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKL 284 (594)
Q Consensus 206 -~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l 284 (594)
..... ..-.++..+.+.+.+......+.+ .|+|++|.+..+. ...+.+|+.|....|++..+. -..
T Consensus 152 ~lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~d---ls~~~~l~~l~c~rn~ls~l~-------~~g 218 (1081)
T KOG0618|consen 152 RLGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVLD---LSNLANLEVLHCERNQLSELE-------ISG 218 (1081)
T ss_pred hhcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhhhhh---hhhccchhhhhhhhcccceEE-------ecC
Confidence 00000 222334444444444444444444 6999999998333 467899999999999976642 256
Q ss_pred CCCCEEEcCCCCCCCCCCcCCCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcE
Q psy6452 285 TNLIVLDLSHNKLSELPDFLNFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVK 364 (594)
Q Consensus 285 ~~L~~L~Ls~N~l~~lp~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~ 364 (594)
++|+.|+.++|.+..+..-..-.+|+++++++|+++.+|.|+... .+|+.+++.+|+++.++...+ ...+|+.
T Consensus 219 ~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp~wi~~~------~nle~l~~n~N~l~~lp~ri~-~~~~L~~ 291 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLPEWIGAC------ANLEALNANHNRLVALPLRIS-RITSLVS 291 (1081)
T ss_pred cchheeeeccCcceeeccccccccceeeecchhhhhcchHHHHhc------ccceEecccchhHHhhHHHHh-hhhhHHH
Confidence 889999999999985543334578999999999999999777654 689999999999999998887 7889999
Q ss_pred EECCCCCCCCCCCccc-cCCccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCC
Q psy6452 365 LDISHNQIKILHKPRC-THTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNL 443 (594)
Q Consensus 365 L~Ls~N~l~~l~~~~~-~~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L 443 (594)
|++..|.++.+++..- ...|++|+|..|.+..+|..+...-...+..|+.+.|+ ...+| ...-..++.|
T Consensus 292 l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~--l~~lp--------~~~e~~~~~L 361 (1081)
T KOG0618|consen 292 LSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNK--LSTLP--------SYEENNHAAL 361 (1081)
T ss_pred HHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcc--ccccc--------cccchhhHHH
Confidence 9999999999886644 67899999999999999997632233347777777764 22223 1122346689
Q ss_pred cEEEcCCccccccCccccccCCCcceEeCCCCcCcccccccccccccCccc-ccCCCCCcEEeCccccCccccccccCCC
Q psy6452 444 ISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLS-ILYLSSIQELHLSNVQLNCIPEDIGNLI 522 (594)
Q Consensus 444 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~-~~~l~~L~~L~Ls~N~l~~ip~~~~~l~ 522 (594)
+.|++.+|.++......+.+++.|++|+|++ |.++.+|.+ +.++..|++|+||+|+++.+|+.+..+.
T Consensus 362 q~LylanN~Ltd~c~p~l~~~~hLKVLhLsy-----------NrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~ 430 (1081)
T KOG0618|consen 362 QELYLANNHLTDSCFPVLVNFKHLKVLHLSY-----------NRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLG 430 (1081)
T ss_pred HHHHHhcCcccccchhhhccccceeeeeecc-----------cccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhh
Confidence 9999999999999999999999999999999 578888854 5689999999999999999999999999
Q ss_pred CCcEEEccCCCCcccCccccCCCCCCEEECcCCCCCc--cCcccccCCCCcEEEccCCCCcccCHhHHhhhhC
Q psy6452 523 CLEKLNISHNKVYKLPESFANLKSLKILDVSYNKLTM--LPDGFVMLSNLTTFYAQRKYWMFLTISLLCYLMG 593 (594)
Q Consensus 523 ~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~--ip~~l~~l~~L~~L~L~~N~l~~l~~~~~~~l~~ 593 (594)
.|++|...+|+|..+| .+..++.|+++|||.|+|+. +|..... ++|++||++||....++...|.-++.
T Consensus 431 ~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~ 501 (1081)
T KOG0618|consen 431 RLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKS 501 (1081)
T ss_pred hhHHHhhcCCceeech-hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHhhh
Confidence 9999999999999999 68999999999999999994 4554333 89999999999988888887765543
No 10
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.94 E-value=2.6e-26 Score=253.87 Aligned_cols=262 Identities=23% Similarity=0.255 Sum_probs=170.5
Q ss_pred ccEEecCCCCCcccChhhhccCcEEEccCccccccccccccCCCCCccccCCCCcccccccccccccccccccccccCcc
Q psy6452 152 LSTRTFCDHELQSIEDDILVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDNDQNTKVTNAMDIAMELIDTELNCCNK 231 (594)
Q Consensus 152 L~~l~l~~n~l~~ip~~~l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~~~ 231 (594)
-..++++++.++.||..+..+|+.|++++|+|+.++.
T Consensus 203 ~~~LdLs~~~LtsLP~~l~~~L~~L~L~~N~Lt~LP~------------------------------------------- 239 (788)
T PRK15387 203 NAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPA------------------------------------------- 239 (788)
T ss_pred CcEEEcCCCCCCcCCcchhcCCCEEEccCCcCCCCCC-------------------------------------------
Confidence 4467777888888887777778888888888886651
Q ss_pred CCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCCcCCCcCccE
Q psy6452 232 QYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPDFLNFKVLKE 311 (594)
Q Consensus 232 ~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~l~~L~~ 311 (594)
.+++|++|+|++|+|+.+|. ..++|+.|++++|.++.+ |. ...+|+.|++++|+++.+|.. .++|++
T Consensus 240 lp~~Lk~LdLs~N~LtsLP~----lp~sL~~L~Ls~N~L~~L---p~----lp~~L~~L~Ls~N~Lt~LP~~--p~~L~~ 306 (788)
T PRK15387 240 LPPELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTHL---PA----LPSGLCKLWIFGNQLTSLPVL--PPGLQE 306 (788)
T ss_pred CCCCCcEEEecCCccCcccC----cccccceeeccCCchhhh---hh----chhhcCEEECcCCcccccccc--ccccce
Confidence 13567888888888887764 236777888888875543 32 225577778888887777753 467778
Q ss_pred EeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCccccCCccEEeCCC
Q psy6452 312 LDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFSMNH 391 (594)
Q Consensus 312 L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~ 391 (594)
|++++|+|+++|. .|.+|+.|++++|+++.+|.. ..+|+.|+|++|+|+.++. ...+|+.|++++
T Consensus 307 LdLS~N~L~~Lp~---------lp~~L~~L~Ls~N~L~~LP~l----p~~Lq~LdLS~N~Ls~LP~--lp~~L~~L~Ls~ 371 (788)
T PRK15387 307 LSVSDNQLASLPA---------LPSELCKLWAYNNQLTSLPTL----PSGLQELSVSDNQLASLPT--LPSELYKLWAYN 371 (788)
T ss_pred eECCCCccccCCC---------CcccccccccccCcccccccc----ccccceEecCCCccCCCCC--CCcccceehhhc
Confidence 8888887777663 234666777777777766631 2356677777777666542 223444444444
Q ss_pred CCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccccCCCcceEe
Q psy6452 392 NIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLKYLKNIKYLN 471 (594)
Q Consensus 392 N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 471 (594)
|.+..+|.. ..+|+.|+
T Consensus 372 N~L~~LP~l---------------------------------------------------------------~~~L~~Ld 388 (788)
T PRK15387 372 NRLTSLPAL---------------------------------------------------------------PSGLKELI 388 (788)
T ss_pred cccccCccc---------------------------------------------------------------ccccceEE
Confidence 433333321 12234444
Q ss_pred CCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccCccccCCCCCCEEE
Q psy6452 472 CSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLPESFANLKSLKILD 551 (594)
Q Consensus 472 Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~ 551 (594)
+++| .+..+|.. .++|+.|++++|.|+.+|... .+|+.|+|++|+|+.||..+..+++|+.|+
T Consensus 389 Ls~N-----------~Lt~LP~l---~s~L~~LdLS~N~LssIP~l~---~~L~~L~Ls~NqLt~LP~sl~~L~~L~~Ld 451 (788)
T PRK15387 389 VSGN-----------RLTSLPVL---PSELKELMVSGNRLTSLPMLP---SGLLSLSVYRNQLTRLPESLIHLSSETTVN 451 (788)
T ss_pred ecCC-----------cccCCCCc---ccCCCEEEccCCcCCCCCcch---hhhhhhhhccCcccccChHHhhccCCCeEE
Confidence 4442 22233322 246888888888888887643 467788888888888888888888888999
Q ss_pred CcCCCCC-ccCccc
Q psy6452 552 VSYNKLT-MLPDGF 564 (594)
Q Consensus 552 Ls~N~l~-~ip~~l 564 (594)
|++|+|+ .++..+
T Consensus 452 Ls~N~Ls~~~~~~L 465 (788)
T PRK15387 452 LEGNPLSERTLQAL 465 (788)
T ss_pred CCCCCCCchHHHHH
Confidence 9999888 334434
No 11
>KOG0618|consensus
Probab=99.94 E-value=4.4e-29 Score=267.50 Aligned_cols=393 Identities=22% Similarity=0.281 Sum_probs=283.2
Q ss_pred CccEEecCCCCCcccChhh--hccCcEEEccCccccccccccccCCCCCccccCCCCccccccccccccccccccccccc
Q psy6452 151 ALSTRTFCDHELQSIEDDI--LVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDNDQNTKVTNAMDIAMELIDTELNC 228 (594)
Q Consensus 151 ~L~~l~l~~n~l~~ip~~~--l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~ 228 (594)
.|..+++++|++...|..+ +++|+.|+++.|.|..++ ....+++.++..++.... -..+|.
T Consensus 46 ~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~~vp--~s~~~~~~l~~lnL~~n~---------------l~~lP~ 108 (1081)
T KOG0618|consen 46 KLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIRSVP--SSCSNMRNLQYLNLKNNR---------------LQSLPA 108 (1081)
T ss_pred eeEEeeccccccccCCchhhhHHHHhhcccchhhHhhCc--hhhhhhhcchhheeccch---------------hhcCch
Confidence 4889999999999999888 889999999999998876 333334444433333221 123455
Q ss_pred CccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCC-CCCCcc------------ccchhhhhcCCCCCE-EEcCC
Q psy6452 229 CNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHN-NHQDIN------------FVQESMSQKLTNLIV-LDLSH 294 (594)
Q Consensus 229 ~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N-~l~~i~------------~l~~~~~~~l~~L~~-L~Ls~ 294 (594)
.+..+.+|++|++|+|++..+|.-+ ..+..++.+..++| ++..++ .+...+.....+|++ |+|++
T Consensus 109 ~~~~lknl~~LdlS~N~f~~~Pl~i-~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~ 187 (1081)
T KOG0618|consen 109 SISELKNLQYLDLSFNHFGPIPLVI-EVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRY 187 (1081)
T ss_pred hHHhhhcccccccchhccCCCchhH-HhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhheeeeccc
Confidence 5566788888888888888877654 35555555555555 111000 011111223344455 88888
Q ss_pred CCCCCCCCcCCCcCccEEeccCCccccCchh---h----------hhccccccCCCcceEEcCCCCCCCCChhhhccCCC
Q psy6452 295 NKLSELPDFLNFKVLKELDISHNNFESMPLC---L----------QVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCK 361 (594)
Q Consensus 295 N~l~~lp~~~~l~~L~~L~Ls~N~l~~lp~~---~----------~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~ 361 (594)
|.+. +-+...+.+|+.|.+..|++..+... + ........|.+|+++++++|+++.+|.+ ...+.+
T Consensus 188 N~~~-~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp~w-i~~~~n 265 (1081)
T KOG0618|consen 188 NEME-VLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLPEW-IGACAN 265 (1081)
T ss_pred chhh-hhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhcchHH-HHhccc
Confidence 8877 32344444444444444444332100 0 0011124567899999999999999954 468999
Q ss_pred CcEEECCCCCCCCCCCccc-cCCccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhccccccccc
Q psy6452 362 LVKLDISHNQIKILHKPRC-THTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVF 440 (594)
Q Consensus 362 L~~L~Ls~N~l~~l~~~~~-~~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~ 440 (594)
|+.|+..+|+++.++...+ ..+|+.|.+..|.+..+|... ..+++|+.|+|..|+ .+.+|..+.....
T Consensus 266 le~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~l--e~~~sL~tLdL~~N~--L~~lp~~~l~v~~------- 334 (1081)
T KOG0618|consen 266 LEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFL--EGLKSLRTLDLQSNN--LPSLPDNFLAVLN------- 334 (1081)
T ss_pred ceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcc--cccceeeeeeehhcc--ccccchHHHhhhh-------
Confidence 9999999999987765533 458999999999999999976 679999999999986 7778875544332
Q ss_pred CCCcEEEcCCccccccCccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCcccccc-cc
Q psy6452 441 SNLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPED-IG 519 (594)
Q Consensus 441 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~-~~ 519 (594)
..+..|..+.|++.......=..++.|+.|.+.+| .+....-+.+.++++|+.|+|++|+|..+|+. +.
T Consensus 335 ~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN----------~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~ 404 (1081)
T KOG0618|consen 335 ASLNTLNVSSNKLSTLPSYEENNHAALQELYLANN----------HLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLR 404 (1081)
T ss_pred HHHHHHhhhhccccccccccchhhHHHHHHHHhcC----------cccccchhhhccccceeeeeecccccccCCHHHHh
Confidence 23566677777776655333345678999999997 34444445677889999999999999999987 89
Q ss_pred CCCCCcEEEccCCCCcccCccccCCCCCCEEECcCCCCCccCcccccCCCCcEEEccCCCCcccCH
Q psy6452 520 NLICLEKLNISHNKVYKLPESFANLKSLKILDVSYNKLTMLPDGFVMLSNLTTFYAQRKYWMFLTI 585 (594)
Q Consensus 520 ~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~l~~ 585 (594)
++..|+.|+||+|+++.||.+...+..|++|...+|+|..+| .+..++.|+.+|++.|.++.+..
T Consensus 405 kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~~l 469 (1081)
T KOG0618|consen 405 KLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEVTL 469 (1081)
T ss_pred chHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchhhhhhh
Confidence 999999999999999999999999999999999999999999 68999999999999999987643
No 12
>KOG4237|consensus
Probab=99.92 E-value=1.7e-26 Score=226.75 Aligned_cols=146 Identities=21% Similarity=0.245 Sum_probs=94.9
Q ss_pred ceeeeeeecccccccccccccccceeeeceecccccccchhhhccCccEEecCCCCCcccChhh---hccCcEEEccCcc
Q psy6452 106 GRMICTIMKFGKEITTVLEEDTNSGTQDTITNNSVEMDENTVKTEALSTRTFCDHELQSIEDDI---LVQLECLHIDNNK 182 (594)
Q Consensus 106 g~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~n~~~~~~~~~~~~~~L~~l~l~~n~l~~ip~~~---l~~L~~L~Ls~N~ 182 (594)
|..|.|..+...+|+..+ |...+ .+.|..|+|++||+++ +++|+.||||+|.
T Consensus 48 g~~VdCr~~GL~eVP~~L-------------------P~~tv------eirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~ 102 (498)
T KOG4237|consen 48 GGIVDCRGKGLTEVPANL-------------------PPETV------EIRLDQNQISSIPPGAFKTLHRLRRLDLSKNN 102 (498)
T ss_pred CceEEccCCCcccCcccC-------------------CCcce------EEEeccCCcccCChhhccchhhhceecccccc
Confidence 477777777666665555 22222 6778899999999999 6789999999999
Q ss_pred ccccccccccCCCCCccccCCCCcccccccccccccccccccccccCccCCCcccEEEccC-CCCcccchHhhhcCCCCC
Q psy6452 183 AQEYIVSMNVDRTPGFKLQNNDNDQNTKVTNAMDIAMELIDTELNCCNKQYHDIFTVNLSH-QDINFVQESMSQKLTNLT 261 (594)
Q Consensus 183 i~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~Ls~-n~l~~l~~~~f~~l~~L~ 261 (594)
|+.|.+. .|++++++.+|-+-+ |+|++++.++|.++..|+
T Consensus 103 Is~I~p~---------------------------------------AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slq 143 (498)
T KOG4237|consen 103 ISFIAPD---------------------------------------AFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQ 143 (498)
T ss_pred hhhcChH---------------------------------------hhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHH
Confidence 9987733 334445554444433 666666666666666666
Q ss_pred EEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCC--CcCCCcCccEEeccCCc
Q psy6452 262 VLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELP--DFLNFKVLKELDISHNN 318 (594)
Q Consensus 262 ~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp--~~~~l~~L~~L~Ls~N~ 318 (594)
.|.+.-|++. -+...+|..+++|..|.+..|.+..++ .|..+..++++.+..|.
T Consensus 144 rLllNan~i~---Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 144 RLLLNANHIN---CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred HHhcChhhhc---chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCc
Confidence 6666666633 345566666666666666666666555 35566666666666555
No 13
>KOG4237|consensus
Probab=99.91 E-value=7.4e-27 Score=229.20 Aligned_cols=263 Identities=15% Similarity=0.141 Sum_probs=190.6
Q ss_pred EecCCCCCcccChhhhccCcEEEccCccccccccccccCCCCCccccCCCCcccccccccccccccccccccccCccCCC
Q psy6452 155 RTFCDHELQSIEDDILVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDNDQNTKVTNAMDIAMELIDTELNCCNKQYH 234 (594)
Q Consensus 155 l~l~~n~l~~ip~~~l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~~~~l~ 234 (594)
.+.++.++++||..++..-.+++|..|+|+.++ +..|+.++
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP---------------------------------------~~aF~~l~ 91 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISSIP---------------------------------------PGAFKTLH 91 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcccCC---------------------------------------hhhccchh
Confidence 345577899999999999999999999999988 44567899
Q ss_pred cccEEEccCCCCcccchHhhhcCCCCCEEECCC-CCCCCccccchhhhhcCCCCCEEEcCCCCCCCCC--CcCCCcCccE
Q psy6452 235 DIFTVNLSHQDINFVQESMSQKLTNLTVLDLSH-NNHQDINFVQESMSQKLTNLIVLDLSHNKLSELP--DFLNFKVLKE 311 (594)
Q Consensus 235 ~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~-N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp--~~~~l~~L~~ 311 (594)
+|+.||||+|+|+.|.+++|.+++.|..|-+.+ |+|+ .+|.++|.++..|+.|.+.-|++..++ .|..+++|..
T Consensus 92 ~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~---~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~l 168 (498)
T KOG4237|consen 92 RLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT---DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSL 168 (498)
T ss_pred hhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh---hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcch
Confidence 999999999999999999999999998888777 8854 589999999999999999999999877 5889999999
Q ss_pred EeccCCccccCchhhhhccccccCCCcceEEcCCCCCCC------------CChhhhccCCCCcEEECCCCCCCCCCCcc
Q psy6452 312 LDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFES------------MPLCLQVHFCKLVKLDISHNQIKILHKPR 379 (594)
Q Consensus 312 L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~------------i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~ 379 (594)
|.+.+|.+..++...+... ..++.+.+..|.+.. .....+.++.-.....+.++++..++...
T Consensus 169 LslyDn~~q~i~~~tf~~l-----~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~k 243 (498)
T KOG4237|consen 169 LSLYDNKIQSICKGTFQGL-----AAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARK 243 (498)
T ss_pred hcccchhhhhhccccccch-----hccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhh
Confidence 9999999999887554332 567777777776331 11112222222222233333333322222
Q ss_pred c----------------------------cCCccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhh
Q psy6452 380 C----------------------------THTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNH 431 (594)
Q Consensus 380 ~----------------------------~~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~ 431 (594)
| .++|+.|++++|++..|.+.. |.....+++|.|..|+ +..
T Consensus 244 f~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~a-Fe~~a~l~eL~L~~N~----------l~~ 312 (498)
T KOG4237|consen 244 FLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGA-FEGAAELQELYLTRNK----------LEF 312 (498)
T ss_pred hhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhh-hcchhhhhhhhcCcch----------HHH
Confidence 2 246666777777666665554 5666667777776664 223
Q ss_pred cccccccccCCCcEEEcCCccccccCccccccCCCcceEeCCCC
Q psy6452 432 MELKENGVFSNLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSND 475 (594)
Q Consensus 432 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 475 (594)
+.-..+..+++|+.|+|.+|+|+...+.+|..+.+|..|++-.|
T Consensus 313 v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~N 356 (498)
T KOG4237|consen 313 VSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSN 356 (498)
T ss_pred HHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccC
Confidence 33334455667777777777777777777777777777777665
No 14
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=1.9e-22 Score=239.08 Aligned_cols=317 Identities=20% Similarity=0.238 Sum_probs=251.0
Q ss_pred ccCccCC-CcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCC-CCCCCCCcC
Q psy6452 227 NCCNKQY-HDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHN-KLSELPDFL 304 (594)
Q Consensus 227 ~~~~~~l-~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N-~l~~lp~~~ 304 (594)
+..|..+ .+|+.|++.++.+..+|... ...+|++|++++|++.. ++.+. ..+++|+.|+|++| .+..+|.+.
T Consensus 581 p~~~~~lp~~Lr~L~~~~~~l~~lP~~f--~~~~L~~L~L~~s~l~~---L~~~~-~~l~~Lk~L~Ls~~~~l~~ip~ls 654 (1153)
T PLN03210 581 PEGFDYLPPKLRLLRWDKYPLRCMPSNF--RPENLVKLQMQGSKLEK---LWDGV-HSLTGLRNIDLRGSKNLKEIPDLS 654 (1153)
T ss_pred CcchhhcCcccEEEEecCCCCCCCCCcC--CccCCcEEECcCccccc---ccccc-ccCCCCCEEECCCCCCcCcCCccc
Confidence 3334444 46999999999999998764 57899999999999654 55554 68999999999987 477899999
Q ss_pred CCcCccEEeccCCc-cccCchhhhhccccccCCCcceEEcCCC-CCCCCChhhhccCCCCcEEECCCCCC-CCCCCcccc
Q psy6452 305 NFKVLKELDISHNN-FESMPLCLQVHFYVHIPYKHSQSDISHN-NFESMPLCLQVHFCKLVKLDISHNQI-KILHKPRCT 381 (594)
Q Consensus 305 ~l~~L~~L~Ls~N~-l~~lp~~~~~~~~~~~~~~L~~L~Ls~N-~l~~i~~~~~~~l~~L~~L~Ls~N~l-~~l~~~~~~ 381 (594)
.+++|++|++++|. +..+|..+... .+|+.|++++| .++.+|... ++++|+.|++++|.. ..++ ...
T Consensus 655 ~l~~Le~L~L~~c~~L~~lp~si~~L------~~L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p--~~~ 724 (1153)
T PLN03210 655 MATNLETLKLSDCSSLVELPSSIQYL------NKLEDLDMSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFP--DIS 724 (1153)
T ss_pred cCCcccEEEecCCCCccccchhhhcc------CCCCEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCCCccccc--ccc
Confidence 99999999999974 66788765432 68999999986 677888765 789999999999853 3332 234
Q ss_pred CCccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCcccc
Q psy6452 382 HTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQL 461 (594)
Q Consensus 382 ~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 461 (594)
.+|+.|++++|.+..+|..+ .+++|+.|.+.++. ...+...+..... ......++|+.|++++|......|..+
T Consensus 725 ~nL~~L~L~~n~i~~lP~~~---~l~~L~~L~l~~~~--~~~l~~~~~~l~~-~~~~~~~sL~~L~Ls~n~~l~~lP~si 798 (1153)
T PLN03210 725 TNISWLDLDETAIEEFPSNL---RLENLDELILCEMK--SEKLWERVQPLTP-LMTMLSPSLTRLFLSDIPSLVELPSSI 798 (1153)
T ss_pred CCcCeeecCCCccccccccc---cccccccccccccc--hhhccccccccch-hhhhccccchheeCCCCCCccccChhh
Confidence 68999999999999999865 57888888887743 1111111100000 011234689999999999888889999
Q ss_pred ccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccc-cCccccccccCCCCCcEEEccCCCCcccCcc
Q psy6452 462 KYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNV-QLNCIPEDIGNLICLEKLNISHNKVYKLPES 540 (594)
Q Consensus 462 ~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N-~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~~ 540 (594)
+.+++|+.|++++| +.++.+|..+ .+++|+.|+|++| .+..+|.. ..+|+.|+|++|.|+.+|.+
T Consensus 799 ~~L~~L~~L~Ls~C----------~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~~iP~s 864 (1153)
T PLN03210 799 QNLHKLEHLEIENC----------INLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIEEVPWW 864 (1153)
T ss_pred hCCCCCCEEECCCC----------CCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCccChHH
Confidence 99999999999987 5677888776 7899999999997 45566653 36899999999999999999
Q ss_pred ccCCCCCCEEECcC-CCCCccCcccccCCCCcEEEccCCC
Q psy6452 541 FANLKSLKILDVSY-NKLTMLPDGFVMLSNLTTFYAQRKY 579 (594)
Q Consensus 541 ~~~l~~L~~L~Ls~-N~l~~ip~~l~~l~~L~~L~L~~N~ 579 (594)
+..+++|++|+|++ |+++.+|..+..+++|+.++++++.
T Consensus 865 i~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 865 IEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred HhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 99999999999998 5888998888899999999998875
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=1e-22 Score=225.45 Aligned_cols=268 Identities=25% Similarity=0.262 Sum_probs=206.6
Q ss_pred CcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCCcCCCcCccEEe
Q psy6452 234 HDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPDFLNFKVLKELD 313 (594)
Q Consensus 234 ~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~l~~L~~L~ 313 (594)
..-..|+|+++.|+.+|+... ++|+.|++++|+|+.+ |. .+++|++|+|++|+|+.+|.+ .++|+.|+
T Consensus 201 ~~~~~LdLs~~~LtsLP~~l~---~~L~~L~L~~N~Lt~L---P~----lp~~Lk~LdLs~N~LtsLP~l--p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPDCLP---AHITTLVIPDNNLTSL---PA----LPPELRTLEVSGNQLTSLPVL--PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCCcCCcchh---cCCCEEEccCCcCCCC---CC----CCCCCcEEEecCCccCcccCc--ccccceee
Confidence 346689999999999988654 4799999999997764 42 357899999999999998864 46899999
Q ss_pred ccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCccccCCccEEeCCCCC
Q psy6452 314 ISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFSMNHNI 393 (594)
Q Consensus 314 Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~N~ 393 (594)
+++|.++.+|. .|.+|+.|++++|+++.+|. ..++|+.|++++|+|++++. ...+|+.|++++|.
T Consensus 269 Ls~N~L~~Lp~---------lp~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~--lp~~L~~L~Ls~N~ 333 (788)
T PRK15387 269 IFSNPLTHLPA---------LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA--LPSELCKLWAYNNQ 333 (788)
T ss_pred ccCCchhhhhh---------chhhcCEEECcCCccccccc----cccccceeECCCCccccCCC--CcccccccccccCc
Confidence 99999998874 23678899999999998875 34689999999999988754 34467778888777
Q ss_pred CCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccccCCCcceEeCC
Q psy6452 394 GMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLKYLKNIKYLNCS 473 (594)
Q Consensus 394 ~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 473 (594)
+..+|... .+|+.|+++ +|+++... .. ..+|+.|+++
T Consensus 334 L~~LP~lp-----~~Lq~LdLS----------------------------------~N~Ls~LP-~l---p~~L~~L~Ls 370 (788)
T PRK15387 334 LTSLPTLP-----SGLQELSVS----------------------------------DNQLASLP-TL---PSELYKLWAY 370 (788)
T ss_pred cccccccc-----cccceEecC----------------------------------CCccCCCC-CC---Ccccceehhh
Confidence 77666421 244445554 44444322 11 2456777888
Q ss_pred CCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccCccccCCCCCCEEECc
Q psy6452 474 NDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLPESFANLKSLKILDVS 553 (594)
Q Consensus 474 ~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls 553 (594)
+| .+..+|.. ..+|+.|+|++|.|+.+|... ++|+.|++++|+|+.+|... .+|+.|+++
T Consensus 371 ~N-----------~L~~LP~l---~~~L~~LdLs~N~Lt~LP~l~---s~L~~LdLS~N~LssIP~l~---~~L~~L~Ls 430 (788)
T PRK15387 371 NN-----------RLTSLPAL---PSGLKELIVSGNRLTSLPVLP---SELKELMVSGNRLTSLPMLP---SGLLSLSVY 430 (788)
T ss_pred cc-----------ccccCccc---ccccceEEecCCcccCCCCcc---cCCCEEEccCCcCCCCCcch---hhhhhhhhc
Confidence 74 34456643 357999999999999998643 68999999999999998643 578899999
Q ss_pred CCCCCccCcccccCCCCcEEEccCCCCcccCHhHHhhh
Q psy6452 554 YNKLTMLPDGFVMLSNLTTFYAQRKYWMFLTISLLCYL 591 (594)
Q Consensus 554 ~N~l~~ip~~l~~l~~L~~L~L~~N~l~~l~~~~~~~l 591 (594)
+|+|+.||..+..+++|+.|+|++|+|+...+..+..+
T Consensus 431 ~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 431 RNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred cCcccccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 99999999999999999999999999997766655433
No 16
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=1.9e-22 Score=224.71 Aligned_cols=247 Identities=22% Similarity=0.330 Sum_probs=161.3
Q ss_pred CcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCCcCCCcCccEEe
Q psy6452 234 HDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPDFLNFKVLKELD 313 (594)
Q Consensus 234 ~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~l~~L~~L~ 313 (594)
.+.+.|++++++++.+|..+. ++|+.|+|++|+|+. +|...+ ++|++|++++|+++.+|.- -..+|+.|+
T Consensus 178 ~~~~~L~L~~~~LtsLP~~Ip---~~L~~L~Ls~N~Lts---LP~~l~---~nL~~L~Ls~N~LtsLP~~-l~~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACIP---EQITTLILDNNELKS---LPENLQ---GNIKTLYANSNQLTSIPAT-LPDTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcCcCCcccc---cCCcEEEecCCCCCc---CChhhc---cCCCEEECCCCccccCChh-hhccccEEE
Confidence 356789999999998887542 578899999998665 565543 5889999999998888741 124788899
Q ss_pred ccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCccccCCccEEeCCCCC
Q psy6452 314 ISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFSMNHNI 393 (594)
Q Consensus 314 Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~N~ 393 (594)
|++|.++.+|..+ +.+|+.|++++|+++.+|...+ ++|+.|++++|+++.++. .+..+|+.|++++|.
T Consensus 248 Ls~N~L~~LP~~l--------~s~L~~L~Ls~N~L~~LP~~l~---~sL~~L~Ls~N~Lt~LP~-~lp~sL~~L~Ls~N~ 315 (754)
T PRK15370 248 LSINRITELPERL--------PSALQSLDLFHNKISCLPENLP---EELRYLSVYDNSIRTLPA-HLPSGITHLNVQSNS 315 (754)
T ss_pred CcCCccCcCChhH--------hCCCCEEECcCCccCccccccC---CCCcEEECCCCccccCcc-cchhhHHHHHhcCCc
Confidence 9999988888644 2578888888888888776543 478888888888877653 223456666666666
Q ss_pred CCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccccCCCcceEeCC
Q psy6452 394 GMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLKYLKNIKYLNCS 473 (594)
Q Consensus 394 ~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 473 (594)
+..+|..+ .++|+ .|++++|.++.. |..+ .++|+.|+++
T Consensus 316 Lt~LP~~l----~~sL~----------------------------------~L~Ls~N~Lt~L-P~~l--~~sL~~L~Ls 354 (754)
T PRK15370 316 LTALPETL----PPGLK----------------------------------TLEAGENALTSL-PASL--PPELQVLDVS 354 (754)
T ss_pred cccCCccc----cccce----------------------------------eccccCCccccC-Chhh--cCcccEEECC
Confidence 55555432 12344 444444444332 1112 1456666666
Q ss_pred CCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccCccc----cCCCCCCE
Q psy6452 474 NDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLPESF----ANLKSLKI 549 (594)
Q Consensus 474 ~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~~~----~~l~~L~~ 549 (594)
+| .+..+|..+ .++|+.|+|++|+|+.+|..+. ..|+.|++++|+|+.+|..+ ..++++..
T Consensus 355 ~N-----------~L~~LP~~l--p~~L~~LdLs~N~Lt~LP~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~ 419 (754)
T PRK15370 355 KN-----------QITVLPETL--PPTITTLDVSRNALTNLPENLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTR 419 (754)
T ss_pred CC-----------CCCcCChhh--cCCcCEEECCCCcCCCCCHhHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccE
Confidence 64 233444433 2467777777777777776543 35777777777777665533 33466677
Q ss_pred EECcCCCCC
Q psy6452 550 LDVSYNKLT 558 (594)
Q Consensus 550 L~Ls~N~l~ 558 (594)
|+|.+|.|+
T Consensus 420 L~L~~Npls 428 (754)
T PRK15370 420 IIVEYNPFS 428 (754)
T ss_pred EEeeCCCcc
Confidence 777777766
No 17
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=5.2e-21 Score=226.85 Aligned_cols=286 Identities=21% Similarity=0.255 Sum_probs=178.5
Q ss_pred CCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCC-CCCCCC-CcCCCcCcc
Q psy6452 233 YHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHN-KLSELP-DFLNFKVLK 310 (594)
Q Consensus 233 l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N-~l~~lp-~~~~l~~L~ 310 (594)
+.+|+.|++++|++..++... ..+++|++|+|+++.. +..+|. ++.+++|+.|+|++| .+..+| .+..+++|+
T Consensus 610 ~~~L~~L~L~~s~l~~L~~~~-~~l~~Lk~L~Ls~~~~--l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~ 684 (1153)
T PLN03210 610 PENLVKLQMQGSKLEKLWDGV-HSLTGLRNIDLRGSKN--LKEIPD--LSMATNLETLKLSDCSSLVELPSSIQYLNKLE 684 (1153)
T ss_pred ccCCcEEECcCcccccccccc-ccCCCCCEEECCCCCC--cCcCCc--cccCCcccEEEecCCCCccccchhhhccCCCC
Confidence 356666666666666665443 4566666666665432 222332 345666666666665 344555 355666666
Q ss_pred EEeccCC-ccccCchhhhhccccccCCCcceEEcCCCC-CCCCChhhhccCCCCcEEECCCCCCCCCCCccccCCccEEe
Q psy6452 311 ELDISHN-NFESMPLCLQVHFYVHIPYKHSQSDISHNN-FESMPLCLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFS 388 (594)
Q Consensus 311 ~L~Ls~N-~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~-l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~ 388 (594)
.|++++| .++.+|..+ ...+|+.|++++|. +..+|. ...+|+.|++++|.++.++.....++|+.|.
T Consensus 685 ~L~L~~c~~L~~Lp~~i-------~l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~ 753 (1153)
T PLN03210 685 DLDMSRCENLEILPTGI-------NLKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDETAIEEFPSNLRLENLDELI 753 (1153)
T ss_pred EEeCCCCCCcCccCCcC-------CCCCCCEEeCCCCCCcccccc----ccCCcCeeecCCCcccccccccccccccccc
Confidence 6666664 455555432 12466666666653 223332 1345666666666666655444445666666
Q ss_pred CCCCCCCCC-------CchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCcccc
Q psy6452 389 MNHNIGMKI-------PEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQL 461 (594)
Q Consensus 389 L~~N~~~~i-------p~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 461 (594)
+.++....+ +... +...++|+.|++++|. ..+.+|.++ ..+++|+.|++++|......|..+
T Consensus 754 l~~~~~~~l~~~~~~l~~~~-~~~~~sL~~L~Ls~n~-~l~~lP~si---------~~L~~L~~L~Ls~C~~L~~LP~~~ 822 (1153)
T PLN03210 754 LCEMKSEKLWERVQPLTPLM-TMLSPSLTRLFLSDIP-SLVELPSSI---------QNLHKLEHLEIENCINLETLPTGI 822 (1153)
T ss_pred ccccchhhccccccccchhh-hhccccchheeCCCCC-CccccChhh---------hCCCCCCEEECCCCCCcCeeCCCC
Confidence 655322111 1111 2334677888887764 455566543 345678888887775444445444
Q ss_pred ccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccC-CCCcccCcc
Q psy6452 462 KYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISH-NKVYKLPES 540 (594)
Q Consensus 462 ~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~-N~l~~lp~~ 540 (594)
.+++|+.|++++| ..+..+|.. .++|+.|+|++|.|+.+|.++..+++|+.|+|++ |+++.+|..
T Consensus 823 -~L~sL~~L~Ls~c----------~~L~~~p~~---~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~C~~L~~l~~~ 888 (1153)
T PLN03210 823 -NLESLESLDLSGC----------SRLRTFPDI---STNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLN 888 (1153)
T ss_pred -CccccCEEECCCC----------Ccccccccc---ccccCEeECCCCCCccChHHHhcCCCCCEEECCCCCCcCccCcc
Confidence 6788888998887 445555542 3578899999999999998888899999999988 678888887
Q ss_pred ccCCCCCCEEECcCC-CCCc
Q psy6452 541 FANLKSLKILDVSYN-KLTM 559 (594)
Q Consensus 541 ~~~l~~L~~L~Ls~N-~l~~ 559 (594)
+..+++|+.|++++| .++.
T Consensus 889 ~~~L~~L~~L~l~~C~~L~~ 908 (1153)
T PLN03210 889 ISKLKHLETVDFSDCGALTE 908 (1153)
T ss_pred cccccCCCeeecCCCccccc
Confidence 888889999999887 4543
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=1.3e-21 Score=217.95 Aligned_cols=245 Identities=24% Similarity=0.314 Sum_probs=138.3
Q ss_pred ccEEecCCCCCcccChhhhccCcEEEccCccccccccccccCCCCCccccCCCCcccccccccccccccccccccccCcc
Q psy6452 152 LSTRTFCDHELQSIEDDILVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDNDQNTKVTNAMDIAMELIDTELNCCNK 231 (594)
Q Consensus 152 L~~l~l~~n~l~~ip~~~l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~~~ 231 (594)
...+.+.+++++.+|..+.++|+.|+|++|+|+.++..
T Consensus 180 ~~~L~L~~~~LtsLP~~Ip~~L~~L~Ls~N~LtsLP~~------------------------------------------ 217 (754)
T PRK15370 180 KTELRLKILGLTTIPACIPEQITTLILDNNELKSLPEN------------------------------------------ 217 (754)
T ss_pred ceEEEeCCCCcCcCCcccccCCcEEEecCCCCCcCChh------------------------------------------
Confidence 45666666666666666666667777777766655410
Q ss_pred CCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCCcCCCcCccE
Q psy6452 232 QYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPDFLNFKVLKE 311 (594)
Q Consensus 232 ~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~l~~L~~ 311 (594)
..++|+.|++++|+|+.+|...+ .+|+.|+|++|.++. +|..+. .+|+.|++++|+|+.+|.-. .++|+.
T Consensus 218 l~~nL~~L~Ls~N~LtsLP~~l~---~~L~~L~Ls~N~L~~---LP~~l~---s~L~~L~Ls~N~L~~LP~~l-~~sL~~ 287 (754)
T PRK15370 218 LQGNIKTLYANSNQLTSIPATLP---DTIQEMELSINRITE---LPERLP---SALQSLDLFHNKISCLPENL-PEELRY 287 (754)
T ss_pred hccCCCEEECCCCccccCChhhh---ccccEEECcCCccCc---CChhHh---CCCCEEECcCCccCcccccc-CCCCcE
Confidence 01356666666666666665432 356666666666443 444332 35666666666666665311 135666
Q ss_pred EeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCccccCCccEEeCCC
Q psy6452 312 LDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFSMNH 391 (594)
Q Consensus 312 L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~ 391 (594)
|++++|+|+.+|..+ +.+|+.|++++|.++.+|...+ ++|+.|++++|.++.+
T Consensus 288 L~Ls~N~Lt~LP~~l--------p~sL~~L~Ls~N~Lt~LP~~l~---~sL~~L~Ls~N~Lt~L---------------- 340 (754)
T PRK15370 288 LSVYDNSIRTLPAHL--------PSGITHLNVQSNSLTALPETLP---PGLKTLEAGENALTSL---------------- 340 (754)
T ss_pred EECCCCccccCcccc--------hhhHHHHHhcCCccccCCcccc---ccceeccccCCccccC----------------
Confidence 666666666655322 2355566666666665554332 3455555555555544
Q ss_pred CCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccccCCCcceEe
Q psy6452 392 NIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLKYLKNIKYLN 471 (594)
Q Consensus 392 N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 471 (594)
|..+ .++|+.|++++|+ ...+|. .+ .++|+.|+
T Consensus 341 ------P~~l----~~sL~~L~Ls~N~--L~~LP~---------------------------------~l--p~~L~~Ld 373 (754)
T PRK15370 341 ------PASL----PPELQVLDVSKNQ--ITVLPE---------------------------------TL--PPTITTLD 373 (754)
T ss_pred ------Chhh----cCcccEEECCCCC--CCcCCh---------------------------------hh--cCCcCEEE
Confidence 3322 1344444444432 111221 11 12344555
Q ss_pred CCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccc----cCCCCCcEEEccCCCCc
Q psy6452 472 CSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDI----GNLICLEKLNISHNKVY 535 (594)
Q Consensus 472 Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~----~~l~~L~~L~Ls~N~l~ 535 (594)
+++| .+..+|..+. .+|+.|++++|+|+.+|..+ ..++.+..|+|.+|.++
T Consensus 374 Ls~N-----------~Lt~LP~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 374 VSRN-----------ALTNLPENLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCCC-----------cCCCCCHhHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 5553 2334444432 36888999999999887654 44588999999999987
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.67 E-value=5.7e-17 Score=166.73 Aligned_cols=280 Identities=21% Similarity=0.195 Sum_probs=146.8
Q ss_pred EEEccCCCCc-ccchHhhhcCCCCCEEECCCCCCCCc--cccchhhhhcCCCCCEEEcCCCCCCCCC--------CcCCC
Q psy6452 238 TVNLSHQDIN-FVQESMSQKLTNLTVLDLSHNNHQDI--NFVQESMSQKLTNLIVLDLSHNKLSELP--------DFLNF 306 (594)
Q Consensus 238 ~L~Ls~n~l~-~l~~~~f~~l~~L~~L~Ls~N~l~~i--~~l~~~~~~~l~~L~~L~Ls~N~l~~lp--------~~~~l 306 (594)
.|+|..+.++ .-....|..+..|++|+++++.++.- ..++ ..+...++|++|+++++.+...+ .+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~-~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALA-SALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHH-HHHhhCCCceEEeccccccCCcchHHHHHHHHHHhc
Confidence 3556666665 22234455666677777777775431 1122 22345566777777776665321 13455
Q ss_pred cCccEEeccCCccccC-chhhhhccccccCCCcceEEcCCCCCCCCCh----hhhccC-CCCcEEECCCCCCCCCCCccc
Q psy6452 307 KVLKELDISHNNFESM-PLCLQVHFYVHIPYKHSQSDISHNNFESMPL----CLQVHF-CKLVKLDISHNQIKILHKPRC 380 (594)
Q Consensus 307 ~~L~~L~Ls~N~l~~l-p~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~----~~~~~l-~~L~~L~Ls~N~l~~l~~~~~ 380 (594)
++|++|++++|.+... +..+.... .. ++|++|++++|+++.-.. ..+..+ ++|+.|++++|.+++....
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~--~~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-- 155 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLL--RS-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE-- 155 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHh--cc-CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH--
Confidence 6666666666666532 22221110 11 235555555555542111 112233 4555555555555431100
Q ss_pred cCCccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccC---
Q psy6452 381 THTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSN--- 457 (594)
Q Consensus 381 ~~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~--- 457 (594)
.++. .+..+.+|+.|++++| .+++..
T Consensus 156 ---------------~~~~--~~~~~~~L~~L~l~~n----------------------------------~l~~~~~~~ 184 (319)
T cd00116 156 ---------------ALAK--ALRANRDLKELNLANN----------------------------------GIGDAGIRA 184 (319)
T ss_pred ---------------HHHH--HHHhCCCcCEEECcCC----------------------------------CCchHHHHH
Confidence 0011 1233344555555544 333211
Q ss_pred -ccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccc-----cccc-cCCCCCcEEEcc
Q psy6452 458 -VSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCI-----PEDI-GNLICLEKLNIS 530 (594)
Q Consensus 458 -~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~i-----p~~~-~~l~~L~~L~Ls 530 (594)
+..+..+++|+.|++++|.+.. .....++..+..+++|++|++++|.++.. ...+ ...+.|++|+++
T Consensus 185 l~~~l~~~~~L~~L~L~~n~i~~------~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~ 258 (319)
T cd00116 185 LAEGLKANCNLEVLDLNNNGLTD------EGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLS 258 (319)
T ss_pred HHHHHHhCCCCCEEeccCCccCh------HHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEcc
Confidence 1122333455555655542221 11122334455667888888888888731 1111 134789999999
Q ss_pred CCCCc-----ccCccccCCCCCCEEECcCCCCCc-----cCcccccC-CCCcEEEccCCCC
Q psy6452 531 HNKVY-----KLPESFANLKSLKILDVSYNKLTM-----LPDGFVML-SNLTTFYAQRKYW 580 (594)
Q Consensus 531 ~N~l~-----~lp~~~~~l~~L~~L~Ls~N~l~~-----ip~~l~~l-~~L~~L~L~~N~l 580 (594)
+|.++ .+...+..+++|+++++++|.++. +...+... +.|+++++.+|+|
T Consensus 259 ~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 259 CNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 99886 334456666889999999999983 33344555 7889999988875
No 20
>KOG0617|consensus
Probab=99.64 E-value=5.2e-18 Score=149.32 Aligned_cols=115 Identities=23% Similarity=0.463 Sum_probs=89.1
Q ss_pred ccccccCCCcceEeCCCCcCcccccccccc-cccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcc
Q psy6452 458 VSQLKYLKNIKYLNCSNDIDHRKSQDFVNV-LWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYK 536 (594)
Q Consensus 458 ~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~-~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~ 536 (594)
|..|+.++.|++||+.+| |. -..+|..|+.++.|+.|+|++|.+.-+|..++++++|+.|.+..|.+-+
T Consensus 95 prgfgs~p~levldltyn----------nl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~ 164 (264)
T KOG0617|consen 95 PRGFGSFPALEVLDLTYN----------NLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLS 164 (264)
T ss_pred ccccCCCchhhhhhcccc----------ccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhh
Confidence 455666666666666665 22 2356777888888999999999999888888999999999999999888
Q ss_pred cCccccCCCCCCEEECcCCCCCccCcccccCC---CCcEEEccCCCCcc
Q psy6452 537 LPESFANLKSLKILDVSYNKLTMLPDGFVMLS---NLTTFYAQRKYWMF 582 (594)
Q Consensus 537 lp~~~~~l~~L~~L~Ls~N~l~~ip~~l~~l~---~L~~L~L~~N~l~~ 582 (594)
+|..++.++.|+.|.+.+|+++.+|..++.+. +=+.+.+.+|+|-.
T Consensus 165 lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 165 LPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred CcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 98888888899999999999998887765543 33567777888753
No 21
>KOG0617|consensus
Probab=99.63 E-value=4e-18 Score=150.06 Aligned_cols=74 Identities=30% Similarity=0.475 Sum_probs=51.3
Q ss_pred cccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccC
Q psy6452 459 SQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLP 538 (594)
Q Consensus 459 ~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp 538 (594)
..|-.+..|+.|++++ |...-+|..++++++|+.|.+..|.+-++|..++.++.|+.|++.+|+++-+|
T Consensus 121 gnff~m~tlralyl~d-----------ndfe~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~vlp 189 (264)
T KOG0617|consen 121 GNFFYMTTLRALYLGD-----------NDFEILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLTVLP 189 (264)
T ss_pred cchhHHHHHHHHHhcC-----------CCcccCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceeeecC
Confidence 3444556666677766 45566677777777777777777777777777777777777777777777776
Q ss_pred ccccC
Q psy6452 539 ESFAN 543 (594)
Q Consensus 539 ~~~~~ 543 (594)
+.++.
T Consensus 190 pel~~ 194 (264)
T KOG0617|consen 190 PELAN 194 (264)
T ss_pred hhhhh
Confidence 65443
No 22
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.57 E-value=1.4e-15 Score=156.49 Aligned_cols=266 Identities=22% Similarity=0.174 Sum_probs=160.1
Q ss_pred EEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCC-----CC-CcCCCcCccEEeccCCccccCchhhhhc-ccccc
Q psy6452 262 VLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSE-----LP-DFLNFKVLKELDISHNNFESMPLCLQVH-FYVHI 334 (594)
Q Consensus 262 ~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~-----lp-~~~~l~~L~~L~Ls~N~l~~lp~~~~~~-~~~~~ 334 (594)
.|+|..+.+++-. . ...+..+.+|+.|+++++.++. ++ .+...++|++|+++++.+...+..+... ..+..
T Consensus 2 ~l~L~~~~l~~~~-~-~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~ 79 (319)
T cd00116 2 QLSLKGELLKTER-A-TELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTK 79 (319)
T ss_pred ccccccCcccccc-h-HHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHh
Confidence 4677788776421 2 3455677788999999888852 33 2446677888888888776433222110 00011
Q ss_pred CCCcceEEcCCCCCCCCChhhhccCCC---CcEEECCCCCCCCCCCccccCCccEEeCCCCCCCCCCchhhhcccCcccE
Q psy6452 335 PYKHSQSDISHNNFESMPLCLQVHFCK---LVKLDISHNQIKILHKPRCTHTLQTFSMNHNIGMKIPEWFWYQEFLCLKE 411 (594)
Q Consensus 335 ~~~L~~L~Ls~N~l~~i~~~~~~~l~~---L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~ 411 (594)
..+|+.|++++|.+.......+..+.+ |++|++++|+++...
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~----------------------------------- 124 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRG----------------------------------- 124 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHH-----------------------------------
Confidence 234444455444444322222222222 444444444433200
Q ss_pred EECcCCCCccCCccHHHhhhccccccccc-CCCcEEEcCCcccccc----CccccccCCCcceEeCCCCcCccccccccc
Q psy6452 412 LNMSSTDPFFEHLPIWLLNHMELKENGVF-SNLISLHMQNTAAVMS----NVSQLKYLKNIKYLNCSNDIDHRKSQDFVN 486 (594)
Q Consensus 412 L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~-~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n 486 (594)
.+ .+.. .+..+ ++|+.|++++|.+++. ....+..+.+|+.|++++|.+...
T Consensus 125 ------------~~-~l~~-----~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~------ 180 (319)
T cd00116 125 ------------LR-LLAK-----GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDA------ 180 (319)
T ss_pred ------------HH-HHHH-----HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchH------
Confidence 00 0000 01112 3566666666665532 233466778899999999743321
Q ss_pred ccccCcccccCCCCCcEEeCccccCc-----cccccccCCCCCcEEEccCCCCccc--C---ccc-cCCCCCCEEECcCC
Q psy6452 487 VLWELPLSILYLSSIQELHLSNVQLN-----CIPEDIGNLICLEKLNISHNKVYKL--P---ESF-ANLKSLKILDVSYN 555 (594)
Q Consensus 487 ~~~~ip~~~~~l~~L~~L~Ls~N~l~-----~ip~~~~~l~~L~~L~Ls~N~l~~l--p---~~~-~~l~~L~~L~Ls~N 555 (594)
....++..+..+++|+.|++++|.++ .++..+..+++|++|++++|.++.. . ..+ ...+.|+.|++++|
T Consensus 181 ~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n 260 (319)
T cd00116 181 GIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCN 260 (319)
T ss_pred HHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCC
Confidence 11234445556789999999999997 3445577889999999999999842 1 111 13479999999999
Q ss_pred CCC-----ccCcccccCCCCcEEEccCCCCcccCHhHH
Q psy6452 556 KLT-----MLPDGFVMLSNLTTFYAQRKYWMFLTISLL 588 (594)
Q Consensus 556 ~l~-----~ip~~l~~l~~L~~L~L~~N~l~~l~~~~~ 588 (594)
.|+ .+.+.+..+++|+++++++|.++.-+...+
T Consensus 261 ~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~ 298 (319)
T cd00116 261 DITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLL 298 (319)
T ss_pred CCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHH
Confidence 997 344556777999999999999997765444
No 23
>KOG3207|consensus
Probab=99.45 E-value=1e-14 Score=146.12 Aligned_cols=157 Identities=19% Similarity=0.158 Sum_probs=87.1
Q ss_pred CCCcccEEEccCCCCcccch-HhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCC-C--cCCCc
Q psy6452 232 QYHDIFTVNLSHQDINFVQE-SMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELP-D--FLNFK 307 (594)
Q Consensus 232 ~l~~L~~L~Ls~n~l~~l~~-~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp-~--~~~l~ 307 (594)
++.+|+.+.|.+..+...+. .....+++++.||||+|-+..+..+ ..+...+++|+.|+|+.|++...- + -..++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v-~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPV-LKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHH-HHHHHhcccchhcccccccccCCccccchhhhh
Confidence 45667777777777665553 3345677777777777776665433 344466777777777777765321 1 22456
Q ss_pred CccEEeccCCcccc--CchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCc---cccC
Q psy6452 308 VLKELDISHNNFES--MPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKP---RCTH 382 (594)
Q Consensus 308 ~L~~L~Ls~N~l~~--lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~---~~~~ 382 (594)
.|+.|.|+.|.++. +...+ ...++|+.|+|.+|....+....+.-++.|+.|||++|++-+.+.. ...+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~------~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~ 271 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWIL------LTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLP 271 (505)
T ss_pred hhheEEeccCCCCHHHHHHHH------HhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccccccccccc
Confidence 67777777777662 11111 1124666666666643333333334455666666666666554422 2233
Q ss_pred CccEEeCCCCCCC
Q psy6452 383 TLQTFSMNHNIGM 395 (594)
Q Consensus 383 ~L~~L~L~~N~~~ 395 (594)
.|+.|+++.+.+.
T Consensus 272 ~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 272 GLNQLNLSSTGIA 284 (505)
T ss_pred chhhhhccccCcc
Confidence 4444444444333
No 24
>KOG0532|consensus
Probab=99.41 E-value=1.3e-14 Score=149.53 Aligned_cols=85 Identities=24% Similarity=0.287 Sum_probs=49.6
Q ss_pred ccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCccccCCccEEe
Q psy6452 309 LKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFS 388 (594)
Q Consensus 309 L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~ 388 (594)
-...||+.|++..+|..+... ..|+.+.|.+|.+..|+..+. ++..|++|||+.|+++.++...|.--|+.|.
T Consensus 77 t~~aDlsrNR~~elp~~~~~f------~~Le~liLy~n~~r~ip~~i~-~L~~lt~l~ls~NqlS~lp~~lC~lpLkvli 149 (722)
T KOG0532|consen 77 TVFADLSRNRFSELPEEACAF------VSLESLILYHNCIRTIPEAIC-NLEALTFLDLSSNQLSHLPDGLCDLPLKVLI 149 (722)
T ss_pred hhhhhccccccccCchHHHHH------HHHHHHHHHhccceecchhhh-hhhHHHHhhhccchhhcCChhhhcCcceeEE
Confidence 344556666666555444322 245555555666665655553 6778888888888888776665554455555
Q ss_pred CCCCCCCCCCch
Q psy6452 389 MNHNIGMKIPEW 400 (594)
Q Consensus 389 L~~N~~~~ip~~ 400 (594)
+++|+++.+|..
T Consensus 150 ~sNNkl~~lp~~ 161 (722)
T KOG0532|consen 150 VSNNKLTSLPEE 161 (722)
T ss_pred EecCccccCCcc
Confidence 555544444443
No 25
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.34 E-value=1.5e-12 Score=119.87 Aligned_cols=124 Identities=24% Similarity=0.266 Sum_probs=39.0
Q ss_pred EccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCCcCCCcCccEEeccCCcc
Q psy6452 240 NLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPDFLNFKVLKELDISHNNF 319 (594)
Q Consensus 240 ~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~l~~L~~L~Ls~N~l 319 (594)
.|..+.|..++. +.+..++++|+|++|.|+.|+.+. ..+.+|+.|+|++|.|+.++.+..++.|++|++++|+|
T Consensus 3 ~lt~~~i~~~~~--~~n~~~~~~L~L~~n~I~~Ie~L~----~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I 76 (175)
T PF14580_consen 3 RLTANMIEQIAQ--YNNPVKLRELNLRGNQISTIENLG----ATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRI 76 (175)
T ss_dssp -----------------------------------S------TT-TT--EEE-TTS--S--TT----TT--EEE--SS--
T ss_pred cccccccccccc--cccccccccccccccccccccchh----hhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCC
Confidence 345555666655 346667888888888876654322 25678888888888888888888888888888888888
Q ss_pred ccCchhhhhccccccCCCcceEEcCCCCCCCCCh-hhhccCCCCcEEECCCCCCCC
Q psy6452 320 ESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPL-CLQVHFCKLVKLDISHNQIKI 374 (594)
Q Consensus 320 ~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~-~~~~~l~~L~~L~Ls~N~l~~ 374 (594)
+.++..+... .++|++|++++|+|..+.. ..+..+++|+.|++.+|.++.
T Consensus 77 ~~i~~~l~~~-----lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 77 SSISEGLDKN-----LPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp -S-CHHHHHH------TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CccccchHHh-----CCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 8876543211 1577777777777776543 344567788888888887764
No 26
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.33 E-value=1.3e-12 Score=120.30 Aligned_cols=121 Identities=25% Similarity=0.333 Sum_probs=40.7
Q ss_pred cCCCCCcccChhh-hccCcEEEccCccccccccccccCCCCCccccCCCCcccccccccccccccccccccccCccCCCc
Q psy6452 157 FCDHELQSIEDDI-LVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDNDQNTKVTNAMDIAMELIDTELNCCNKQYHD 235 (594)
Q Consensus 157 l~~n~l~~ip~~~-l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~ 235 (594)
++.+.|..++... ..++++|+|++|+|+.+. .+. ..+.+
T Consensus 4 lt~~~i~~~~~~~n~~~~~~L~L~~n~I~~Ie---------~L~-------------------------------~~l~~ 43 (175)
T PF14580_consen 4 LTANMIEQIAQYNNPVKLRELNLRGNQISTIE---------NLG-------------------------------ATLDK 43 (175)
T ss_dssp -----------------------------------------S---------------------------------TT-TT
T ss_pred cccccccccccccccccccccccccccccccc---------chh-------------------------------hhhcC
Confidence 4456677777666 667889999999888765 111 12567
Q ss_pred ccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCC---cCCCcCccEE
Q psy6452 236 IFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPD---FLNFKVLKEL 312 (594)
Q Consensus 236 L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~---~~~l~~L~~L 312 (594)
|+.|+|++|+|+.++. +..+++|++|++++|+|+.+ .......+++|++|+|++|+|.++.+ +..+++|+.|
T Consensus 44 L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~~i---~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L 118 (175)
T PF14580_consen 44 LEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRISSI---SEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVL 118 (175)
T ss_dssp --EEE-TTS--S--TT------TT--EEE--SS---S----CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EE
T ss_pred CCEEECCCCCCccccC--ccChhhhhhcccCCCCCCcc---ccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCccee
Confidence 8889999999998876 67888999999999996663 33443468889999999998886653 5577888888
Q ss_pred eccCCccccC
Q psy6452 313 DISHNNFESM 322 (594)
Q Consensus 313 ~Ls~N~l~~l 322 (594)
+|.+|.++.-
T Consensus 119 ~L~~NPv~~~ 128 (175)
T PF14580_consen 119 SLEGNPVCEK 128 (175)
T ss_dssp E-TT-GGGGS
T ss_pred eccCCcccch
Confidence 8888888754
No 27
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.29 E-value=5.1e-12 Score=134.06 Aligned_cols=120 Identities=33% Similarity=0.478 Sum_probs=69.2
Q ss_pred CEEECCCCCC-CCccccchhhhhcCCCCCEEEcCCCCCCCCCCcCCCc--CccEEeccCCccccCchhhhhccccccCCC
Q psy6452 261 TVLDLSHNNH-QDINFVQESMSQKLTNLIVLDLSHNKLSELPDFLNFK--VLKELDISHNNFESMPLCLQVHFYVHIPYK 337 (594)
Q Consensus 261 ~~L~Ls~N~l-~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~l~--~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~ 337 (594)
..++++.|.+ ..+ .. ...++.++.|++.+|.++.++...... +|+.|++++|.+..+|..+ ..+++
T Consensus 96 ~~l~~~~~~~~~~~----~~-~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~------~~l~~ 164 (394)
T COG4886 96 PSLDLNLNRLRSNI----SE-LLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPL------RNLPN 164 (394)
T ss_pred ceeeccccccccCc----hh-hhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhh------hcccc
Confidence 3577777775 221 11 134566777777777777777654443 6777777777777765332 22356
Q ss_pred cceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCcc-ccCCccEEeCCCC
Q psy6452 338 HSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPR-CTHTLQTFSMNHN 392 (594)
Q Consensus 338 L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~-~~~~L~~L~L~~N 392 (594)
|+.|++++|+++.++.... ..+.|+.|++++|+++.++... ....|+++.+++|
T Consensus 165 L~~L~l~~N~l~~l~~~~~-~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N 219 (394)
T COG4886 165 LKNLDLSFNDLSDLPKLLS-NLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNN 219 (394)
T ss_pred ccccccCCchhhhhhhhhh-hhhhhhheeccCCccccCchhhhhhhhhhhhhhcCC
Confidence 6666666666666665432 4556666666666666555442 2333555555554
No 28
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.26 E-value=9.1e-12 Score=132.14 Aligned_cols=195 Identities=27% Similarity=0.365 Sum_probs=104.4
Q ss_pred cEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCC-CCcEEECCCCCCCCCC-CccccCCccEE
Q psy6452 310 KELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFC-KLVKLDISHNQIKILH-KPRCTHTLQTF 387 (594)
Q Consensus 310 ~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~-~L~~L~Ls~N~l~~l~-~~~~~~~L~~L 387 (594)
..++++.|.+..-...+... ..++.|++.+|.++.++.... ... +|+.|++++|++..++ +...+++|+.|
T Consensus 96 ~~l~~~~~~~~~~~~~~~~~------~~l~~L~l~~n~i~~i~~~~~-~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L 168 (394)
T COG4886 96 PSLDLNLNRLRSNISELLEL------TNLTSLDLDNNNITDIPPLIG-LLKSNLKELDLSDNKIESLPSPLRNLPNLKNL 168 (394)
T ss_pred ceeeccccccccCchhhhcc------cceeEEecCCcccccCccccc-cchhhcccccccccchhhhhhhhhcccccccc
Confidence 35777777764322111110 356666666666666666542 332 5666666666666653 33444555555
Q ss_pred eCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccccCCCc
Q psy6452 388 SMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLKYLKNI 467 (594)
Q Consensus 388 ~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 467 (594)
++++|.+..+|... ...+. |+.|++++|.+..... .......|
T Consensus 169 ~l~~N~l~~l~~~~--~~~~~----------------------------------L~~L~ls~N~i~~l~~-~~~~~~~L 211 (394)
T COG4886 169 DLSFNDLSDLPKLL--SNLSN----------------------------------LNNLDLSGNKISDLPP-EIELLSAL 211 (394)
T ss_pred ccCCchhhhhhhhh--hhhhh----------------------------------hhheeccCCccccCch-hhhhhhhh
Confidence 55555555555432 12333 3333333333333221 11233446
Q ss_pred ceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccCccccCCCCC
Q psy6452 468 KYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLPESFANLKSL 547 (594)
Q Consensus 468 ~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L 547 (594)
+.+.+++| ....++..+..+.++..|.+++|++..++..++.+++++.|++++|+++.++. +..+.++
T Consensus 212 ~~l~~~~N-----------~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l 279 (394)
T COG4886 212 EELDLSNN-----------SIIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSISS-LGSLTNL 279 (394)
T ss_pred hhhhhcCC-----------cceecchhhhhcccccccccCCceeeeccchhccccccceecccccccccccc-ccccCcc
Confidence 66666663 23344445555566666666666666655556666666666666666666654 5566666
Q ss_pred CEEECcCCCCCcc
Q psy6452 548 KILDVSYNKLTML 560 (594)
Q Consensus 548 ~~L~Ls~N~l~~i 560 (594)
+.|++++|.++.+
T Consensus 280 ~~L~~s~n~~~~~ 292 (394)
T COG4886 280 RELDLSGNSLSNA 292 (394)
T ss_pred CEEeccCcccccc
Confidence 6666666666644
No 29
>KOG2932|consensus
Probab=99.20 E-value=8.2e-12 Score=118.60 Aligned_cols=73 Identities=38% Similarity=0.672 Sum_probs=69.0
Q ss_pred cccccccccccccCCceeeeccCCCccceeeeecceeeEeeecccCCcccccccCCCCeeeeceeeeeeeccccccc
Q psy6452 44 TQIDMEADISQLEAPTFTTITRGPPKPMLSLRWDHTVHLIGEKVLNPIIHTCEKCEKPIMIYGRMICTIMKFGKEIT 120 (594)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~C~~C~~~~~~~g~~i~~~~~~~~~~~ 120 (594)
-++++|+++...++++|+.+.|.+| .+.|++.|.+.|||+..|+++||++|+.+|.+|||+|+|+++|+-+.+
T Consensus 46 ~tv~~e~~~~~~~~p~f~~~~r~pp----hl~w~~~V~~~gek~l~p~VHfCd~Cd~PI~IYGRmIPCkHvFCl~CA 118 (389)
T KOG2932|consen 46 VTVACEDHLVLADLPVFKGIGRVPP----HLTWIKPVGRRGEKQLGPRVHFCDRCDFPIAIYGRMIPCKHVFCLECA 118 (389)
T ss_pred eeeccchhhhhcCCchhcccccCCC----ceeeeeecccccccccCcceEeecccCCcceeeecccccchhhhhhhh
Confidence 4789999999999999999999887 789999999999999999999999999999999999999999987754
No 30
>KOG3207|consensus
Probab=99.19 E-value=3.8e-12 Score=127.88 Aligned_cols=208 Identities=20% Similarity=0.196 Sum_probs=124.2
Q ss_pred CCcceEEcCCCCCCCCCh-hhhccCCCCcEEECCCCCCCCCCCccccCCccEEeCCCCCCCCCCchhhhcccCcccEEEC
Q psy6452 336 YKHSQSDISHNNFESMPL-CLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNM 414 (594)
Q Consensus 336 ~~L~~L~Ls~N~l~~i~~-~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~L 414 (594)
.+|+.+.|.+..+..++. .....+++++.||||.|-+....+.. . ....+++|+.|++
T Consensus 121 kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~-------------------~--i~eqLp~Le~LNl 179 (505)
T KOG3207|consen 121 KKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVL-------------------K--IAEQLPSLENLNL 179 (505)
T ss_pred HhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHH-------------------H--HHHhcccchhccc
Confidence 467778888877775553 23346778888888888776533210 0 1234555555555
Q ss_pred cCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccc-cccCCCcceEeCCCCcCcccccccccccccCcc
Q psy6452 415 SSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQ-LKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPL 493 (594)
Q Consensus 415 s~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~ 493 (594)
+.|+.....-. ..-..++.|+.|.++.|.++...... ...+++|+.|++..|. .+.....
T Consensus 180 s~Nrl~~~~~s---------~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~----------~~~~~~~ 240 (505)
T KOG3207|consen 180 SSNRLSNFISS---------NTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANE----------IILIKAT 240 (505)
T ss_pred ccccccCCccc---------cchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhccc----------ccceecc
Confidence 55541111000 00013456777777777776443332 3566777777777762 1111111
Q ss_pred cccCCCCCcEEeCccccCccccc--cccCCCCCcEEEccCCCCccc--Ccc-----ccCCCCCCEEECcCCCCCccCcc-
Q psy6452 494 SILYLSSIQELHLSNVQLNCIPE--DIGNLICLEKLNISHNKVYKL--PES-----FANLKSLKILDVSYNKLTMLPDG- 563 (594)
Q Consensus 494 ~~~~l~~L~~L~Ls~N~l~~ip~--~~~~l~~L~~L~Ls~N~l~~l--p~~-----~~~l~~L~~L~Ls~N~l~~ip~~- 563 (594)
+..-+..|++|||++|++-..+. ..+.++.|+.|+++.+.|.+| |+. ...+++|++|+++.|+|.+++.-
T Consensus 241 ~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~ 320 (505)
T KOG3207|consen 241 STKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLN 320 (505)
T ss_pred hhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccc
Confidence 22234577888888887776653 366778888888888888755 332 24567788888888888765432
Q ss_pred -cccCCCCcEEEccCCCCccc
Q psy6452 564 -FVMLSNLTTFYAQRKYWMFL 583 (594)
Q Consensus 564 -l~~l~~L~~L~L~~N~l~~l 583 (594)
+..+++|+.|.+..|++..-
T Consensus 321 ~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 321 HLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred hhhccchhhhhhccccccccc
Confidence 56667777777777777643
No 31
>KOG0531|consensus
Probab=99.16 E-value=4.9e-12 Score=134.71 Aligned_cols=264 Identities=22% Similarity=0.198 Sum_probs=149.9
Q ss_pred CcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCC-cCCCcCccEE
Q psy6452 234 HDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPD-FLNFKVLKEL 312 (594)
Q Consensus 234 ~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~-~~~l~~L~~L 312 (594)
+.++.++...+.+...... ...+..++.+++..|.+..+ ......+.+|+.|++..|+|..+.. +..+++|++|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~~----~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L 123 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAKI----LNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVL 123 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhhh----hcccccccceeeeeccccchhhcccchhhhhcchhe
Confidence 4455555555555444432 13455666666777765441 1222466677777777777777666 6667777777
Q ss_pred eccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCC--ccccCCccEEeCC
Q psy6452 313 DISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHK--PRCTHTLQTFSMN 390 (594)
Q Consensus 313 ~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~--~~~~~~L~~L~L~ 390 (594)
++++|.|+.+... .....|+.|++++|.|+.+.... .++.|+.+++++|+++.+.. .....+++.++++
T Consensus 124 ~ls~N~I~~i~~l-------~~l~~L~~L~l~~N~i~~~~~~~--~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~ 194 (414)
T KOG0531|consen 124 DLSFNKITKLEGL-------STLTLLKELNLSGNLISDISGLE--SLKSLKLLDLSYNRIVDIENDELSELISLEELDLG 194 (414)
T ss_pred eccccccccccch-------hhccchhhheeccCcchhccCCc--cchhhhcccCCcchhhhhhhhhhhhccchHHHhcc
Confidence 7777777765421 11123555555555555554332 36667777777777766655 2333445555555
Q ss_pred CCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccccCCCcceE
Q psy6452 391 HNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLKYLKNIKYL 470 (594)
Q Consensus 391 ~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 470 (594)
+|.+..+.... .+..+ ..+++..|.++...
T Consensus 195 ~n~i~~i~~~~---~~~~l----------------------------------~~~~l~~n~i~~~~------------- 224 (414)
T KOG0531|consen 195 GNSIREIEGLD---LLKKL----------------------------------VLLSLLDNKISKLE------------- 224 (414)
T ss_pred CCchhcccchH---HHHHH----------------------------------HHhhcccccceecc-------------
Confidence 55443333211 11111 11122222221110
Q ss_pred eCCCCcCcccccccccccccCcccccCCC--CCcEEeCccccCccccccccCCCCCcEEEccCCCCcccCccccCCCCCC
Q psy6452 471 NCSNDIDHRKSQDFVNVLWELPLSILYLS--SIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLPESFANLKSLK 548 (594)
Q Consensus 471 ~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~--~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~ 548 (594)
. +..+. .|+.+++++|.+..++..+..+..+..|++++|++..+.. +.....+.
T Consensus 225 -------------------~----l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~~~~~-~~~~~~~~ 280 (414)
T KOG0531|consen 225 -------------------G----LNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRISNLEG-LERLPKLS 280 (414)
T ss_pred -------------------C----cccchhHHHHHHhcccCccccccccccccccccccchhhcccccccc-ccccchHH
Confidence 0 11112 3778888888888776667778888888888888886632 55566777
Q ss_pred EEECcCCCCC---ccCcc--cccCCCCcEEEccCCCCcccCH
Q psy6452 549 ILDVSYNKLT---MLPDG--FVMLSNLTTFYAQRKYWMFLTI 585 (594)
Q Consensus 549 ~L~Ls~N~l~---~ip~~--l~~l~~L~~L~L~~N~l~~l~~ 585 (594)
.+.+..|.+. ...+. ....+.++.+.+..|++.....
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 281 ELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred HhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 7777777776 22222 4567788888888888776554
No 32
>KOG0532|consensus
Probab=99.16 E-value=1.6e-12 Score=134.31 Aligned_cols=142 Identities=21% Similarity=0.329 Sum_probs=120.6
Q ss_pred ccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCC-CcCC
Q psy6452 227 NCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELP-DFLN 305 (594)
Q Consensus 227 ~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp-~~~~ 305 (594)
+.+..++..|++|||+.|+++.+|..++ . --|+.|-+++|+++. +|..+ +.+..|..||.+.|.+.++| .+.+
T Consensus 114 p~~i~~L~~lt~l~ls~NqlS~lp~~lC-~-lpLkvli~sNNkl~~---lp~~i-g~~~tl~~ld~s~nei~slpsql~~ 187 (722)
T KOG0532|consen 114 PEAICNLEALTFLDLSSNQLSHLPDGLC-D-LPLKVLIVSNNKLTS---LPEEI-GLLPTLAHLDVSKNEIQSLPSQLGY 187 (722)
T ss_pred chhhhhhhHHHHhhhccchhhcCChhhh-c-CcceeEEEecCcccc---CCccc-ccchhHHHhhhhhhhhhhchHHhhh
Confidence 4445667889999999999999998874 3 358999999999665 66666 58899999999999999998 6889
Q ss_pred CcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCccccC
Q psy6452 306 FKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPRCTH 382 (594)
Q Consensus 306 l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~ 382 (594)
+.+|+.|.+..|++..+|+.+..+ .|..||+|.|++..||.++ .++..|++|-|.+|.+++-+...|..
T Consensus 188 l~slr~l~vrRn~l~~lp~El~~L-------pLi~lDfScNkis~iPv~f-r~m~~Lq~l~LenNPLqSPPAqIC~k 256 (722)
T KOG0532|consen 188 LTSLRDLNVRRNHLEDLPEELCSL-------PLIRLDFSCNKISYLPVDF-RKMRHLQVLQLENNPLQSPPAQICEK 256 (722)
T ss_pred HHHHHHHHHhhhhhhhCCHHHhCC-------ceeeeecccCceeecchhh-hhhhhheeeeeccCCCCCChHHHHhc
Confidence 999999999999999999887643 6889999999999999875 69999999999999999876555543
No 33
>KOG1259|consensus
Probab=99.15 E-value=7.4e-12 Score=119.95 Aligned_cols=131 Identities=21% Similarity=0.144 Sum_probs=107.9
Q ss_pred CCCcEEEcCCccccccCccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccC
Q psy6452 441 SNLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGN 520 (594)
Q Consensus 441 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~ 520 (594)
..|+.+++++|.|+.+. ...+-++.++.|+++.|.+ ..+. .+..+++|+.||||+|.++.+..+-..
T Consensus 284 q~LtelDLS~N~I~~iD-ESvKL~Pkir~L~lS~N~i-----------~~v~-nLa~L~~L~~LDLS~N~Ls~~~Gwh~K 350 (490)
T KOG1259|consen 284 QELTELDLSGNLITQID-ESVKLAPKLRRLILSQNRI-----------RTVQ-NLAELPQLQLLDLSGNLLAECVGWHLK 350 (490)
T ss_pred hhhhhccccccchhhhh-hhhhhccceeEEeccccce-----------eeeh-hhhhcccceEeecccchhHhhhhhHhh
Confidence 37888889998887654 4567788999999999633 3332 256678999999999999988777778
Q ss_pred CCCCcEEEccCCCCcccCccccCCCCCCEEECcCCCCCccC--cccccCCCCcEEEccCCCCcccCH
Q psy6452 521 LICLEKLNISHNKVYKLPESFANLKSLKILDVSYNKLTMLP--DGFVMLSNLTTFYAQRKYWMFLTI 585 (594)
Q Consensus 521 l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~ip--~~l~~l~~L~~L~L~~N~l~~l~~ 585 (594)
+-+.+.|.|++|.|.++. .+..+-+|..||+++|+|..+. .+++.+|.|+.+.|.+||++.++.
T Consensus 351 LGNIKtL~La~N~iE~LS-GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 351 LGNIKTLKLAQNKIETLS-GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hcCEeeeehhhhhHhhhh-hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 899999999999999884 5788889999999999999653 458999999999999999998774
No 34
>KOG1909|consensus
Probab=99.11 E-value=4.6e-12 Score=124.18 Aligned_cols=93 Identities=18% Similarity=0.274 Sum_probs=48.6
Q ss_pred cccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCc-----cccccc-cCCCCCcEEEccCC
Q psy6452 459 SQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLN-----CIPEDI-GNLICLEKLNISHN 532 (594)
Q Consensus 459 ~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~-----~ip~~~-~~l~~L~~L~Ls~N 532 (594)
..|..+++|++|||.+|-+..... ..+...+..+++|+.|++++|.+. .+-..+ ...++|++|.|.+|
T Consensus 207 eal~~~~~LevLdl~DNtft~egs------~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gN 280 (382)
T KOG1909|consen 207 EALEHCPHLEVLDLRDNTFTLEGS------VALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGN 280 (382)
T ss_pred HHHHhCCcceeeecccchhhhHHH------HHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcc
Confidence 345666777777777652211100 012223444566666666666665 222222 23566666666666
Q ss_pred CCc-----ccCccccCCCCCCEEECcCCCC
Q psy6452 533 KVY-----KLPESFANLKSLKILDVSYNKL 557 (594)
Q Consensus 533 ~l~-----~lp~~~~~l~~L~~L~Ls~N~l 557 (594)
.|+ .+-.+....+.|..|+|++|++
T Consensus 281 eIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 281 EITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred hhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 666 1222344456666666666666
No 35
>KOG0531|consensus
Probab=99.06 E-value=2.1e-11 Score=129.87 Aligned_cols=155 Identities=26% Similarity=0.266 Sum_probs=113.1
Q ss_pred CCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCCcCCCcCccEE
Q psy6452 233 YHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPDFLNFKVLKEL 312 (594)
Q Consensus 233 l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~l~~L~~L 312 (594)
+..++.+++..|.|..+... +..+.+|+.|++.+|+|..+..+ +..+++|++|++++|.|+.+..+..++.|+.|
T Consensus 71 l~~l~~l~l~~n~i~~~~~~-l~~~~~l~~l~l~~n~i~~i~~~----l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L 145 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAKILNH-LSKLKSLEALDLYDNKIEKIENL----LSSLVNLQVLDLSFNKITKLEGLSTLTLLKEL 145 (414)
T ss_pred hHhHHhhccchhhhhhhhcc-cccccceeeeeccccchhhcccc----hhhhhcchheeccccccccccchhhccchhhh
Confidence 45677777888888874332 36778888888888887665321 35788888888888888888888888888888
Q ss_pred eccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCccccCCccEEeCCCC
Q psy6452 313 DISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFSMNHN 392 (594)
Q Consensus 313 ~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~N 392 (594)
++++|.|+.++.. .....|+.+++++|.+..+.......+.+++.+++.+|.+..+........+..+++..|
T Consensus 146 ~l~~N~i~~~~~~-------~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 146 NLSGNLISDISGL-------ESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIEGLDLLKKLVLLSLLDN 218 (414)
T ss_pred eeccCcchhccCC-------ccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhcccchHHHHHHHHhhcccc
Confidence 8888888876532 123678888888888888776202477788889999998888776655556666677777
Q ss_pred CCCCCCc
Q psy6452 393 IGMKIPE 399 (594)
Q Consensus 393 ~~~~ip~ 399 (594)
.+..+..
T Consensus 219 ~i~~~~~ 225 (414)
T KOG0531|consen 219 KISKLEG 225 (414)
T ss_pred cceeccC
Confidence 6655543
No 36
>KOG1259|consensus
Probab=99.05 E-value=4.3e-11 Score=114.78 Aligned_cols=62 Identities=19% Similarity=0.179 Sum_probs=36.0
Q ss_pred CcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCCCCCccccCCccEEeCCCCCCCCCCc
Q psy6452 337 KHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFSMNHNIGMKIPE 399 (594)
Q Consensus 337 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~N~~~~ip~ 399 (594)
.|+++|||+|.|+.|.... .-.|+++.|++|+|.|..+...++.++|+.||+++|.+..+..
T Consensus 285 ~LtelDLS~N~I~~iDESv-KL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls~~~G 346 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDESV-KLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLAECVG 346 (490)
T ss_pred hhhhccccccchhhhhhhh-hhccceeEEeccccceeeehhhhhcccceEeecccchhHhhhh
Confidence 4666666666666666554 2456666777777766666554555555555555554444433
No 37
>KOG1909|consensus
Probab=98.92 E-value=2.5e-10 Score=112.09 Aligned_cols=91 Identities=16% Similarity=0.173 Sum_probs=61.0
Q ss_pred CCCcccEEEccCCCCcc----cchHhhhcCCCCCEEECCCCCCCCc-cccch------hhhhcCCCCCEEEcCCCCCC--
Q psy6452 232 QYHDIFTVNLSHQDINF----VQESMSQKLTNLTVLDLSHNNHQDI-NFVQE------SMSQKLTNLIVLDLSHNKLS-- 298 (594)
Q Consensus 232 ~l~~L~~L~Ls~n~l~~----l~~~~f~~l~~L~~L~Ls~N~l~~i-~~l~~------~~~~~l~~L~~L~Ls~N~l~-- 298 (594)
....++.|+||+|.+.. .....+...++|+..++|+=-.... ..+|. .++...++|++||||.|.+.
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 35688999999998873 2334456778888888886332111 12222 12235678999999999887
Q ss_pred CCCC----cCCCcCccEEeccCCccccC
Q psy6452 299 ELPD----FLNFKVLKELDISHNNFESM 322 (594)
Q Consensus 299 ~lp~----~~~l~~L~~L~Ls~N~l~~l 322 (594)
.++. +..+..|++|.|.+|.+...
T Consensus 108 g~~~l~~ll~s~~~L~eL~L~N~Glg~~ 135 (382)
T KOG1909|consen 108 GIRGLEELLSSCTDLEELYLNNCGLGPE 135 (382)
T ss_pred chHHHHHHHHhccCHHHHhhhcCCCChh
Confidence 4554 34678899999999988743
No 38
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.92 E-value=7.4e-10 Score=83.90 Aligned_cols=61 Identities=33% Similarity=0.427 Sum_probs=52.5
Q ss_pred CcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCC
Q psy6452 234 HDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKL 297 (594)
Q Consensus 234 ~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l 297 (594)
++|++|++++|+|+.+++.+|.++++|++|++++|.+ ..+++.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l---~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNL---TSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSE---SEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCcc---CccCHHHHcCCCCCCEEeCcCCcC
Confidence 4688999999999999988899999999999999984 457788888999999999998875
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.90 E-value=1e-09 Score=83.15 Aligned_cols=58 Identities=40% Similarity=0.582 Sum_probs=31.0
Q ss_pred CCcEEEccCCCCcccCc-cccCCCCCCEEECcCCCCCccCcc-cccCCCCcEEEccCCCC
Q psy6452 523 CLEKLNISHNKVYKLPE-SFANLKSLKILDVSYNKLTMLPDG-FVMLSNLTTFYAQRKYW 580 (594)
Q Consensus 523 ~L~~L~Ls~N~l~~lp~-~~~~l~~L~~L~Ls~N~l~~ip~~-l~~l~~L~~L~L~~N~l 580 (594)
+|++|++++|+|+.+|. +|.++++|++|++++|+|+.++.. |..+++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 45555555555555543 455555555555555555555432 55555555555555543
No 40
>PLN03150 hypothetical protein; Provisional
Probab=98.80 E-value=8.9e-09 Score=114.91 Aligned_cols=93 Identities=28% Similarity=0.405 Sum_probs=44.4
Q ss_pred ccccCcccccCCCCCcEEeCccccCc-cccccccCCCCCcEEEccCCCCc-ccCccccCCCCCCEEECcCCCCC-ccCcc
Q psy6452 487 VLWELPLSILYLSSIQELHLSNVQLN-CIPEDIGNLICLEKLNISHNKVY-KLPESFANLKSLKILDVSYNKLT-MLPDG 563 (594)
Q Consensus 487 ~~~~ip~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~ip~~ 563 (594)
..+.+|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..
T Consensus 430 L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~ 509 (623)
T PLN03150 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAA 509 (623)
T ss_pred ccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChH
Confidence 33444444444555555555555544 44444555555555555555554 34444455555555555555554 44444
Q ss_pred cccC-CCCcEEEccCCC
Q psy6452 564 FVML-SNLTTFYAQRKY 579 (594)
Q Consensus 564 l~~l-~~L~~L~L~~N~ 579 (594)
+..+ .++..+++.+|+
T Consensus 510 l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 510 LGGRLLHRASFNFTDNA 526 (623)
T ss_pred HhhccccCceEEecCCc
Confidence 3322 234444454444
No 41
>PLN03150 hypothetical protein; Provisional
Probab=98.71 E-value=2.2e-08 Score=111.77 Aligned_cols=107 Identities=21% Similarity=0.303 Sum_probs=96.2
Q ss_pred CCcEEEcCCccccccCccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCc-cccccccC
Q psy6452 442 NLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLN-CIPEDIGN 520 (594)
Q Consensus 442 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~ 520 (594)
.++.|+|++|.+.+..+..+..+++|+.|+|++| ++.+.+|..+..+++|+.|+|++|+++ .+|+.+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N----------~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~ 488 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGN----------SIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQ 488 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCC----------cccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhc
Confidence 4788999999999999999999999999999998 677899999999999999999999999 78999999
Q ss_pred CCCCcEEEccCCCCc-ccCccccCC-CCCCEEECcCCCCC
Q psy6452 521 LICLEKLNISHNKVY-KLPESFANL-KSLKILDVSYNKLT 558 (594)
Q Consensus 521 l~~L~~L~Ls~N~l~-~lp~~~~~l-~~L~~L~Ls~N~l~ 558 (594)
+++|++|+|++|+++ .+|..+..+ .++..+++++|...
T Consensus 489 L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 489 LTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCCCCEEECcCCcccccCChHHhhccccCceEEecCCccc
Confidence 999999999999999 778877653 57789999999654
No 42
>KOG4658|consensus
Probab=98.67 E-value=3.1e-08 Score=113.20 Aligned_cols=84 Identities=29% Similarity=0.331 Sum_probs=56.7
Q ss_pred CcccEEEccCCC--CcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCC-CcCCCcCcc
Q psy6452 234 HDIFTVNLSHQD--INFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELP-DFLNFKVLK 310 (594)
Q Consensus 234 ~~L~~L~Ls~n~--l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp-~~~~l~~L~ 310 (594)
++|++|-+..|. +..++...|..++.|++|||++|. .+..+|..+ +.+-+|++|+|++..++.+| .+.++.+|.
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~--~l~~LP~~I-~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~ 621 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNS--SLSKLPSSI-GELVHLRYLDLSDTGISHLPSGLGNLKKLI 621 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCC--ccCcCChHH-hhhhhhhcccccCCCccccchHHHHHHhhh
Confidence 456777777775 667777777777777777777655 334566554 56777777777777777777 466777777
Q ss_pred EEeccCCccc
Q psy6452 311 ELDISHNNFE 320 (594)
Q Consensus 311 ~L~Ls~N~l~ 320 (594)
+|++..+.-.
T Consensus 622 ~Lnl~~~~~l 631 (889)
T KOG4658|consen 622 YLNLEVTGRL 631 (889)
T ss_pred eecccccccc
Confidence 7777766543
No 43
>KOG4658|consensus
Probab=98.62 E-value=3.9e-08 Score=112.43 Aligned_cols=312 Identities=20% Similarity=0.197 Sum_probs=179.6
Q ss_pred CCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCC-CCCCCC-CcCCCcCc
Q psy6452 232 QYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHN-KLSELP-DFLNFKVL 309 (594)
Q Consensus 232 ~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N-~l~~lp-~~~~l~~L 309 (594)
.+..++.+.+-+|.+..++... ..++|++|-+..|.- .+..++..+|..++.|++|||++| .+..+| .++.+-+|
T Consensus 521 ~~~~~rr~s~~~~~~~~~~~~~--~~~~L~tLll~~n~~-~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIEHIAGSS--ENPKLRTLLLQRNSD-WLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred chhheeEEEEeccchhhccCCC--CCCccceEEEeecch-hhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 3467888999999998887653 566899999999962 123466788899999999999988 677999 47789999
Q ss_pred cEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCcEEECCCCCCCC----CCCccccCCcc
Q psy6452 310 KELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLVKLDISHNQIKI----LHKPRCTHTLQ 385 (594)
Q Consensus 310 ~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~----l~~~~~~~~L~ 385 (594)
++|++++..++.+|.++... ..|.+|++.++.-....+.....+++|++|.+..-.... +.......+|+
T Consensus 598 ryL~L~~t~I~~LP~~l~~L------k~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~ 671 (889)
T KOG4658|consen 598 RYLDLSDTGISHLPSGLGNL------KKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLE 671 (889)
T ss_pred hcccccCCCccccchHHHHH------HhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchh
Confidence 99999999999999988765 588999999887554446666679999999987665211 01111222333
Q ss_pred EEeCCCCCCCCCCchhhhcccCccc----EEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCcccc
Q psy6452 386 TFSMNHNIGMKIPEWFWYQEFLCLK----ELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQL 461 (594)
Q Consensus 386 ~L~L~~N~~~~ip~~~~~~~~~~L~----~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 461 (594)
.+....... .+-.. +..+..|. .+.+.++ ...........+.+|+.|.+.++.+........
T Consensus 672 ~ls~~~~s~-~~~e~--l~~~~~L~~~~~~l~~~~~-----------~~~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~ 737 (889)
T KOG4658|consen 672 NLSITISSV-LLLED--LLGMTRLRSLLQSLSIEGC-----------SKRTLISSLGSLGNLEELSILDCGISEIVIEWE 737 (889)
T ss_pred hheeecchh-HhHhh--hhhhHHHHHHhHhhhhccc-----------ccceeecccccccCcceEEEEcCCCchhhcccc
Confidence 333211111 00000 01111111 1111110 011122233456677777777766643322221
Q ss_pred cc------CCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCc-cccccccCCCCCcEEEccCCCC
Q psy6452 462 KY------LKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLN-CIPEDIGNLICLEKLNISHNKV 534 (594)
Q Consensus 462 ~~------l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~Ls~N~l 534 (594)
.. ++++..+...++ .....+...--.++|+.|++.++... .+.+....+..+..+-+..+.+
T Consensus 738 ~~~~~~~~f~~l~~~~~~~~-----------~~~r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~ 806 (889)
T KOG4658|consen 738 ESLIVLLCFPNLSKVSILNC-----------HMLRDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKL 806 (889)
T ss_pred cccchhhhHHHHHHHHhhcc-----------ccccccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccccc
Confidence 11 111111111111 01111222223578899999888654 4444445555555555666665
Q ss_pred cccC--ccccCCCCCCEEECcCCCCCcc-----CcccccCCCCcEEEccCC
Q psy6452 535 YKLP--ESFANLKSLKILDVSYNKLTML-----PDGFVMLSNLTTFYAQRK 578 (594)
Q Consensus 535 ~~lp--~~~~~l~~L~~L~Ls~N~l~~i-----p~~l~~l~~L~~L~L~~N 578 (594)
..++ ...+.++++..+.+++=.+..+ |. +..+|.+.++.+.++
T Consensus 807 ~~l~~~~~l~~l~~i~~~~l~~~~l~~~~ve~~p~-l~~~P~~~~~~i~~~ 856 (889)
T KOG4658|consen 807 EGLRMLCSLGGLPQLYWLPLSFLKLEELIVEECPK-LGKLPLLSTLTIVGC 856 (889)
T ss_pred ccceeeecCCCCceeEecccCccchhheehhcCcc-cccCccccccceecc
Confidence 5442 2445556666655555444422 22 356677777777664
No 44
>KOG1859|consensus
Probab=98.61 E-value=5.4e-10 Score=118.70 Aligned_cols=128 Identities=25% Similarity=0.297 Sum_probs=98.6
Q ss_pred CCcEEEcCCccccccCccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCcccccc-ccC
Q psy6452 442 NLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPED-IGN 520 (594)
Q Consensus 442 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~-~~~ 520 (594)
.|...+.+.|.+.... .++.-++.|+.|+|+.|+. ..+- .+..++.|++|||++|.+..+|.. ...
T Consensus 165 ~L~~a~fsyN~L~~mD-~SLqll~ale~LnLshNk~-----------~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~g 231 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMD-ESLQLLPALESLNLSHNKF-----------TKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVG 231 (1096)
T ss_pred hHhhhhcchhhHHhHH-HHHHHHHHhhhhccchhhh-----------hhhH-HHHhcccccccccccchhccccccchhh
Confidence 4556666667665443 5567778888999998632 2332 566788999999999999999875 445
Q ss_pred CCCCcEEEccCCCCcccCccccCCCCCCEEECcCCCCCccCc--ccccCCCCcEEEccCCCCcccC
Q psy6452 521 LICLEKLNISHNKVYKLPESFANLKSLKILDVSYNKLTMLPD--GFVMLSNLTTFYAQRKYWMFLT 584 (594)
Q Consensus 521 l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~ip~--~l~~l~~L~~L~L~~N~l~~l~ 584 (594)
+. |+.|.|++|.++++- .+.++++|+.|||++|-|..-.+ -+..+..|+.|+|.|||+-.=|
T Consensus 232 c~-L~~L~lrnN~l~tL~-gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 232 CK-LQLLNLRNNALTTLR-GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred hh-heeeeecccHHHhhh-hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 55 999999999999884 58899999999999998884322 2678889999999999987655
No 45
>KOG2982|consensus
Probab=98.48 E-value=6.9e-08 Score=93.11 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=42.6
Q ss_pred CccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCcc---
Q psy6452 383 TLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVS--- 459 (594)
Q Consensus 383 ~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~--- 459 (594)
++..+-+..|.+.+....-.+..++.+..|+|+.++ +..+-++..+..|+.|..|.++++.+......
T Consensus 200 nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~---------idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~er 270 (418)
T KOG2982|consen 200 NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANN---------IDSWASVDALNGFPQLVDLRVSENPLSDPLRGGER 270 (418)
T ss_pred cchheeeecCcccchhhcccCCCCCcchhhhhcccc---------cccHHHHHHHcCCchhheeeccCCcccccccCCcc
Confidence 444444444444444433334455555566666543 22333445556667777777777766443221
Q ss_pred ---ccccCCCcceEeCC
Q psy6452 460 ---QLKYLKNIKYLNCS 473 (594)
Q Consensus 460 ---~~~~l~~L~~L~Ls 473 (594)
.++.+++++.|+=+
T Consensus 271 r~llIaRL~~v~vLNGs 287 (418)
T KOG2982|consen 271 RFLLIARLTKVQVLNGS 287 (418)
T ss_pred eEEEEeeccceEEecCc
Confidence 23566677766544
No 46
>KOG2982|consensus
Probab=98.47 E-value=5.6e-08 Score=93.71 Aligned_cols=224 Identities=17% Similarity=0.140 Sum_probs=125.4
Q ss_pred CCEEEcCCCCCCCCCC---cC-CCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCC
Q psy6452 287 LIVLDLSHNKLSELPD---FL-NFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKL 362 (594)
Q Consensus 287 L~~L~Ls~N~l~~lp~---~~-~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L 362 (594)
++.|.+.++.|..... |+ ..+.+++|||.+|.|+...+. ..+..++|.|
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI---------------------------~~ile~lP~l 99 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEI---------------------------GAILEQLPAL 99 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHH---------------------------HHHHhcCccc
Confidence 4455555555554433 22 345566666666666653321 1233577777
Q ss_pred cEEECCCCCCCCCCCcc--ccCCccEEeCCCCCCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhccccccccc
Q psy6452 363 VKLDISHNQIKILHKPR--CTHTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVF 440 (594)
Q Consensus 363 ~~L~Ls~N~l~~l~~~~--~~~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~ 440 (594)
++|+++.|++....... -..+|++|-|.+..+.=-........+|.++.|.+|.|
T Consensus 100 ~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N----------------------- 156 (418)
T KOG2982|consen 100 TTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDN----------------------- 156 (418)
T ss_pred eEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccc-----------------------
Confidence 77888877776532221 22366666666653321111112356777777777776
Q ss_pred CCCcEEEcCCccccccCccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccc--cc
Q psy6452 441 SNLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPE--DI 518 (594)
Q Consensus 441 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~--~~ 518 (594)
+++.+.+..+-+....+ .++.|....|....- ... +.++. -++++..+-+..|.|..... .+
T Consensus 157 -~~rq~n~Dd~c~e~~s~-------~v~tlh~~~c~~~~w-~~~-~~l~r------~Fpnv~sv~v~e~PlK~~s~ek~s 220 (418)
T KOG2982|consen 157 -SLRQLNLDDNCIEDWST-------EVLTLHQLPCLEQLW-LNK-NKLSR------IFPNVNSVFVCEGPLKTESSEKGS 220 (418)
T ss_pred -hhhhhccccccccccch-------hhhhhhcCCcHHHHH-HHH-HhHHh------hcccchheeeecCcccchhhcccC
Confidence 44555555554433221 122222222200000 000 11111 24678888888888875533 36
Q ss_pred cCCCCCcEEEccCCCCcccCc--cccCCCCCCEEECcCCCCC-cc----Ccc--cccCCCCcEEEcc
Q psy6452 519 GNLICLEKLNISHNKVYKLPE--SFANLKSLKILDVSYNKLT-ML----PDG--FVMLSNLTTFYAQ 576 (594)
Q Consensus 519 ~~l~~L~~L~Ls~N~l~~lp~--~~~~l~~L~~L~Ls~N~l~-~i----p~~--l~~l~~L~~L~L~ 576 (594)
..++.+-.|+|+.|+|.+... .+.++++|..|.+++|.|. .+ +.. ++.+++++.|+=+
T Consensus 221 e~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNGs 287 (418)
T KOG2982|consen 221 EPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNGS 287 (418)
T ss_pred CCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEecCc
Confidence 677888889999999886533 6788889999999999887 22 222 5678888887754
No 47
>KOG4579|consensus
Probab=98.44 E-value=1.3e-08 Score=87.22 Aligned_cols=90 Identities=19% Similarity=0.341 Sum_probs=46.8
Q ss_pred CCCcEEeCccccCccccccccC-CCCCcEEEccCCCCcccCccccCCCCCCEEECcCCCCCccCcccccCCCCcEEEccC
Q psy6452 499 SSIQELHLSNVQLNCIPEDIGN-LICLEKLNISHNKVYKLPESFANLKSLKILDVSYNKLTMLPDGFVMLSNLTTFYAQR 577 (594)
Q Consensus 499 ~~L~~L~Ls~N~l~~ip~~~~~-l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~ 577 (594)
..|+..+|++|.+..+|..|.. .+.++.|+|++|.|+.+|..+..++.|+.|+++.|.|...|+-+..+.+|-.|+..+
T Consensus 53 ~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~~Lds~~ 132 (177)
T KOG4579|consen 53 YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLDMLDSPE 132 (177)
T ss_pred ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCccccchHHHHHHHhHHHhcCCC
Confidence 3444455555555555554432 235555555555555555555555555555555555555555544455555555555
Q ss_pred CCCcccCHhHH
Q psy6452 578 KYWMFLTISLL 588 (594)
Q Consensus 578 N~l~~l~~~~~ 588 (594)
|.+..||..+|
T Consensus 133 na~~eid~dl~ 143 (177)
T KOG4579|consen 133 NARAEIDVDLF 143 (177)
T ss_pred CccccCcHHHh
Confidence 55555555433
No 48
>KOG1859|consensus
Probab=98.43 E-value=2.6e-09 Score=113.59 Aligned_cols=158 Identities=20% Similarity=0.190 Sum_probs=107.8
Q ss_pred ccCCCcccEEEccCCCCcccch---------------------Hhhh----------cCCCCCEEECCCCCCCCccccch
Q psy6452 230 NKQYHDIFTVNLSHQDINFVQE---------------------SMSQ----------KLTNLTVLDLSHNNHQDINFVQE 278 (594)
Q Consensus 230 ~~~l~~L~~L~Ls~n~l~~l~~---------------------~~f~----------~l~~L~~L~Ls~N~l~~i~~l~~ 278 (594)
...+.+|+.|.|.++.|..... .+|. ....|...+.++|.+..+ .
T Consensus 105 ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~m----D 180 (1096)
T KOG1859|consen 105 IFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLVLM----D 180 (1096)
T ss_pred eccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHHhH----H
Confidence 3457788999999888864321 1111 112466777888886543 2
Q ss_pred hhhhcCCCCCEEEcCCCCCCCCCCcCCCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhcc
Q psy6452 279 SMSQKLTNLIVLDLSHNKLSELPDFLNFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVH 358 (594)
Q Consensus 279 ~~~~~l~~L~~L~Ls~N~l~~lp~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~ 358 (594)
..+.-++.|+.|||++|+++.+..+..+++|++|||++|.++.+|.-- ..-..|..|.+++|.++.+.... +
T Consensus 181 ~SLqll~ale~LnLshNk~~~v~~Lr~l~~LkhLDlsyN~L~~vp~l~------~~gc~L~~L~lrnN~l~tL~gie--~ 252 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKVDNLRRLPKLKHLDLSYNCLRHVPQLS------MVGCKLQLLNLRNNALTTLRGIE--N 252 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhhHHHHhcccccccccccchhccccccc------hhhhhheeeeecccHHHhhhhHH--h
Confidence 344677888888888888888777778888888888888888877422 12245888888888887665443 7
Q ss_pred CCCCcEEECCCCCCCCCCCccc---cCCccEEeCCCCCCCCCCc
Q psy6452 359 FCKLVKLDISHNQIKILHKPRC---THTLQTFSMNHNIGMKIPE 399 (594)
Q Consensus 359 l~~L~~L~Ls~N~l~~l~~~~~---~~~L~~L~L~~N~~~~ip~ 399 (594)
+.+|+.||+++|-|.+.....+ ...|+.|+|.+|.+..-|.
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~ 296 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPW 296 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHH
Confidence 7888888888887776543332 3467788888886655543
No 49
>KOG4579|consensus
Probab=98.39 E-value=1.3e-08 Score=87.15 Aligned_cols=112 Identities=18% Similarity=0.195 Sum_probs=85.7
Q ss_pred ccccCCCcceEeCCCCcCcccccccccccccCccccc-CCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccC
Q psy6452 460 QLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSIL-YLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLP 538 (594)
Q Consensus 460 ~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~-~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp 538 (594)
.+.....|+..++++| .+..+|..|. .++.++.|+|++|.|+.+|..+..++.|+.|+++.|.+...|
T Consensus 48 ~l~~~~el~~i~ls~N-----------~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~~~p 116 (177)
T KOG4579|consen 48 MLSKGYELTKISLSDN-----------GFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNPLNAEP 116 (177)
T ss_pred HHhCCceEEEEecccc-----------hhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCccccch
Confidence 3445566777788884 5556666655 345889999999999999999999999999999999999888
Q ss_pred ccccCCCCCCEEECcCCCCCccCcccccCCCCcEEEccCCCCcc
Q psy6452 539 ESFANLKSLKILDVSYNKLTMLPDGFVMLSNLTTFYAQRKYWMF 582 (594)
Q Consensus 539 ~~~~~l~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ 582 (594)
..+..+.++-.||..+|.+..||-.+-.-+..-..++.+++|..
T Consensus 117 ~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 117 RVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred HHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcccc
Confidence 87877999999999999999887763322333344456677654
No 50
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.31 E-value=5.9e-07 Score=62.59 Aligned_cols=36 Identities=36% Similarity=0.635 Sum_probs=14.8
Q ss_pred CcEEEccCCCCcccCccccCCCCCCEEECcCCCCCc
Q psy6452 524 LEKLNISHNKVYKLPESFANLKSLKILDVSYNKLTM 559 (594)
Q Consensus 524 L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~ 559 (594)
|++|++++|+|+.+|..++.+++|+.|++++|+|+.
T Consensus 3 L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~ 38 (44)
T PF12799_consen 3 LEELDLSNNQITDLPPELSNLPNLETLNLSNNPISD 38 (44)
T ss_dssp -SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSB
T ss_pred ceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCC
Confidence 444444444444444334444444444444444443
No 51
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.29 E-value=6.2e-07 Score=62.48 Aligned_cols=41 Identities=32% Similarity=0.331 Sum_probs=36.2
Q ss_pred CCCCEEECcCCCCCccCcccccCCCCcEEEccCCCCcccCH
Q psy6452 545 KSLKILDVSYNKLTMLPDGFVMLSNLTTFYAQRKYWMFLTI 585 (594)
Q Consensus 545 ~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~l~~ 585 (594)
++|++|++++|+|+.+|..+..+++|++|++++|+|+.+++
T Consensus 1 ~~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i~~ 41 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDISP 41 (44)
T ss_dssp TT-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBEGG
T ss_pred CcceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCCcC
Confidence 57999999999999999889999999999999999998754
No 52
>KOG1644|consensus
Probab=98.15 E-value=3.5e-06 Score=77.34 Aligned_cols=82 Identities=21% Similarity=0.284 Sum_probs=37.6
Q ss_pred CCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCC-----cCCCc
Q psy6452 233 YHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPD-----FLNFK 307 (594)
Q Consensus 233 l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~-----~~~l~ 307 (594)
+++|..|.|++|+|+.|.+..-.-+++|..|.|.+|.|..++.+.+- ..+++|++|.+-+|.++.-.. +..++
T Consensus 63 l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pL--a~~p~L~~Ltll~Npv~~k~~YR~yvl~klp 140 (233)
T KOG1644|consen 63 LPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPL--ASCPKLEYLTLLGNPVEHKKNYRLYVLYKLP 140 (233)
T ss_pred ccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchh--ccCCccceeeecCCchhcccCceeEEEEecC
Confidence 34455555555555555544444444455555555554444433332 244455555555554443321 23444
Q ss_pred CccEEeccC
Q psy6452 308 VLKELDISH 316 (594)
Q Consensus 308 ~L~~L~Ls~ 316 (594)
+|++||.++
T Consensus 141 ~l~~LDF~k 149 (233)
T KOG1644|consen 141 SLRTLDFQK 149 (233)
T ss_pred cceEeehhh
Confidence 444444443
No 53
>KOG2120|consensus
Probab=98.11 E-value=1.8e-07 Score=90.32 Aligned_cols=133 Identities=22% Similarity=0.194 Sum_probs=95.3
Q ss_pred CcccEEEccCCCCcc-cchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCC-CCCCCC---CcCCCcC
Q psy6452 234 HDIFTVNLSHQDINF-VQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHN-KLSELP---DFLNFKV 308 (594)
Q Consensus 234 ~~L~~L~Ls~n~l~~-l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N-~l~~lp---~~~~l~~ 308 (594)
+.|++||||...|+. --..+++.+.+|+.|.|.++++.+ .+. ..++...+|+.|+|+.+ .++... -+.+++.
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD--~I~-~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~ 261 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDD--PIV-NTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSR 261 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCc--HHH-HHHhccccceeeccccccccchhHHHHHHHhhhh
Confidence 469999999999883 234456889999999999999866 233 33468899999999987 566433 2678999
Q ss_pred ccEEeccCCccccCchhhhhccccccCCCcceEEcCCCC--CC-CCChhhhccCCCCcEEECCCCCC
Q psy6452 309 LKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNN--FE-SMPLCLQVHFCKLVKLDISHNQI 372 (594)
Q Consensus 309 L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~--l~-~i~~~~~~~l~~L~~L~Ls~N~l 372 (594)
|..|+|+.+.++.-- ......++.++|+.|+|++.. +. +--...-..+++|.+||||+|..
T Consensus 262 L~~LNlsWc~l~~~~---Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~ 325 (419)
T KOG2120|consen 262 LDELNLSWCFLFTEK---VTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVM 325 (419)
T ss_pred HhhcCchHhhccchh---hhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccc
Confidence 999999999887410 111123566789999998863 22 21122235788999999998753
No 54
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.10 E-value=1.2e-05 Score=83.14 Aligned_cols=136 Identities=15% Similarity=0.157 Sum_probs=66.4
Q ss_pred CCCCcEEECCCCCCCCCCCccccCCccEEeCCCC-CCCCCCchhhhcccCcccEEECcCCCCccCCccHHHhhhcccccc
Q psy6452 359 FCKLVKLDISHNQIKILHKPRCTHTLQTFSMNHN-IGMKIPEWFWYQEFLCLKELNMSSTDPFFEHLPIWLLNHMELKEN 437 (594)
Q Consensus 359 l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~N-~~~~ip~~~~~~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~ 437 (594)
+.+++.|++++|.|+.++ .++.+|+.|.++++ .+..+|..+ .++|+.|++++|.. ...+|.
T Consensus 51 ~~~l~~L~Is~c~L~sLP--~LP~sLtsL~Lsnc~nLtsLP~~L----P~nLe~L~Ls~Cs~-L~sLP~----------- 112 (426)
T PRK15386 51 ARASGRLYIKDCDIESLP--VLPNELTEITIENCNNLTTLPGSI----PEGLEKLTVCHCPE-ISGLPE----------- 112 (426)
T ss_pred hcCCCEEEeCCCCCcccC--CCCCCCcEEEccCCCCcccCCchh----hhhhhheEccCccc-cccccc-----------
Confidence 456666666666666664 34456666666653 445555433 24666777766531 223332
Q ss_pred cccCCCcEEEcCCccccccCccccccC-CCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccc
Q psy6452 438 GVFSNLISLHMQNTAAVMSNVSQLKYL-KNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPE 516 (594)
Q Consensus 438 ~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~ 516 (594)
+|+.|++..+.... +..+ ++|+.|.+.++.. .....+|.. -.++|++|++++|....+|.
T Consensus 113 ----sLe~L~L~~n~~~~-----L~~LPssLk~L~I~~~n~--------~~~~~lp~~--LPsSLk~L~Is~c~~i~LP~ 173 (426)
T PRK15386 113 ----SVRSLEIKGSATDS-----IKNVPNGLTSLSINSYNP--------ENQARIDNL--ISPSLKTLSLTGCSNIILPE 173 (426)
T ss_pred ----ccceEEeCCCCCcc-----cccCcchHhheecccccc--------ccccccccc--cCCcccEEEecCCCcccCcc
Confidence 45555554433221 1112 2344555432200 000111100 01467777777766655554
Q ss_pred cccCCCCCcEEEccCCC
Q psy6452 517 DIGNLICLEKLNISHNK 533 (594)
Q Consensus 517 ~~~~l~~L~~L~Ls~N~ 533 (594)
.+. .+|+.|+++.|.
T Consensus 174 ~LP--~SLk~L~ls~n~ 188 (426)
T PRK15386 174 KLP--ESLQSITLHIEQ 188 (426)
T ss_pred ccc--ccCcEEEecccc
Confidence 444 467777776653
No 55
>KOG2120|consensus
Probab=98.08 E-value=1.7e-07 Score=90.44 Aligned_cols=106 Identities=15% Similarity=0.062 Sum_probs=57.6
Q ss_pred cceEEcCCCCCC-CCChhhhccCCCCcEEECCCCCCCCCCCcc--ccCCccEEeCCCC-CCCCCCchhhhcccCcccEEE
Q psy6452 338 HSQSDISHNNFE-SMPLCLQVHFCKLVKLDISHNQIKILHKPR--CTHTLQTFSMNHN-IGMKIPEWFWYQEFLCLKELN 413 (594)
Q Consensus 338 L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~--~~~~L~~L~L~~N-~~~~ip~~~~~~~~~~L~~L~ 413 (594)
+++||||+..|+ +--..++..+.+|+.|.+.++++.+-.... --.+|+.++++.+ .+++......+.+++.|..|+
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LN 266 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELN 266 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcC
Confidence 445555554444 111223456667777777777776522221 1235666666665 455555555567888888888
Q ss_pred CcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCc
Q psy6452 414 MSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNT 451 (594)
Q Consensus 414 Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n 451 (594)
++.|..+...+...+... -++|+.|+++++
T Consensus 267 lsWc~l~~~~Vtv~V~hi--------se~l~~LNlsG~ 296 (419)
T KOG2120|consen 267 LSWCFLFTEKVTVAVAHI--------SETLTQLNLSGY 296 (419)
T ss_pred chHhhccchhhhHHHhhh--------chhhhhhhhhhh
Confidence 888754443333222111 235666666654
No 56
>KOG1644|consensus
Probab=98.03 E-value=1.1e-05 Score=74.04 Aligned_cols=88 Identities=17% Similarity=0.168 Sum_probs=57.5
Q ss_pred cCCCCCEEEcCCCCCCCCCCcCCCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCCh-hhhccCCC
Q psy6452 283 KLTNLIVLDLSHNKLSELPDFLNFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPL-CLQVHFCK 361 (594)
Q Consensus 283 ~l~~L~~L~Ls~N~l~~lp~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~-~~~~~l~~ 361 (594)
.+.+...+||++|.+..++.|..++.|.+|.|++|+|+.|.+.+... .++|..|.|.+|.|..+.. .-++.+++
T Consensus 40 ~~d~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~-----~p~l~~L~LtnNsi~~l~dl~pLa~~p~ 114 (233)
T KOG1644|consen 40 TLDQFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRITRIDPDLDTF-----LPNLKTLILTNNSIQELGDLDPLASCPK 114 (233)
T ss_pred cccccceecccccchhhcccCCCccccceEEecCCcceeeccchhhh-----ccccceEEecCcchhhhhhcchhccCCc
Confidence 34556667777777777777777777777777777777776655432 2566677777776664322 12346777
Q ss_pred CcEEECCCCCCCCC
Q psy6452 362 LVKLDISHNQIKIL 375 (594)
Q Consensus 362 L~~L~Ls~N~l~~l 375 (594)
|++|.+-+|.++.-
T Consensus 115 L~~Ltll~Npv~~k 128 (233)
T KOG1644|consen 115 LEYLTLLGNPVEHK 128 (233)
T ss_pred cceeeecCCchhcc
Confidence 88888877777653
No 57
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.01 E-value=5.2e-07 Score=86.09 Aligned_cols=114 Identities=18% Similarity=0.155 Sum_probs=58.2
Q ss_pred CCCcEEEcCCccccccCcc-----ccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCcc--
Q psy6452 441 SNLISLHMQNTAAVMSNVS-----QLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNC-- 513 (594)
Q Consensus 441 ~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~-- 513 (594)
.+|+.+.+..|.|...... .+.++.+|++||+.+|-...... ..+...+..++.|+.|.+..|-++.
T Consensus 185 ~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS------~~La~al~~W~~lrEL~lnDClls~~G 258 (388)
T COG5238 185 ENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGS------RYLADALCEWNLLRELRLNDCLLSNEG 258 (388)
T ss_pred cCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhH------HHHHHHhcccchhhhccccchhhcccc
Confidence 3667777777766443222 23456777777777762221110 0112233445567777777776661
Q ss_pred ---cccccc--CCCCCcEEEccCCCCc--c-----cCc-cccCCCCCCEEECcCCCCCcc
Q psy6452 514 ---IPEDIG--NLICLEKLNISHNKVY--K-----LPE-SFANLKSLKILDVSYNKLTML 560 (594)
Q Consensus 514 ---ip~~~~--~l~~L~~L~Ls~N~l~--~-----lp~-~~~~l~~L~~L~Ls~N~l~~i 560 (594)
+-..|. ..++|+.|-..+|.+. . ++. .-..++-|..|.+.+|+|++.
T Consensus 259 ~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E~ 318 (388)
T COG5238 259 VKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKEL 318 (388)
T ss_pred HHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchhH
Confidence 111121 2356666666666654 1 121 113455566666666666643
No 58
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.01 E-value=3.1e-06 Score=80.88 Aligned_cols=169 Identities=18% Similarity=0.152 Sum_probs=105.2
Q ss_pred hccCcEEEccCccccccccccccCCCCCccccCCCCcccccccccccccccccccccccCccCCCcccEEEccCCCCccc
Q psy6452 170 LVQLECLHIDNNKAQEYIVSMNVDRTPGFKLQNNDNDQNTKVTNAMDIAMELIDTELNCCNKQYHDIFTVNLSHQDINFV 249 (594)
Q Consensus 170 l~~L~~L~Ls~N~i~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~l 249 (594)
+..+.+++||+|.|..-... .+..+..+-.+|+..+++.-.....
T Consensus 29 ~d~~~evdLSGNtigtEA~e-----------------------------------~l~~~ia~~~~L~vvnfsd~ftgr~ 73 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAME-----------------------------------ELCNVIANVRNLRVVNFSDAFTGRD 73 (388)
T ss_pred hcceeEEeccCCcccHHHHH-----------------------------------HHHHHHhhhcceeEeehhhhhhccc
Confidence 66799999999999764421 0011122345666666665433211
Q ss_pred ----c------hHhhhcCCCCCEEECCCCCCCCccccc--hhhhhcCCCCCEEEcCCCCCCCCCC---------------
Q psy6452 250 ----Q------ESMSQKLTNLTVLDLSHNNHQDINFVQ--ESMSQKLTNLIVLDLSHNKLSELPD--------------- 302 (594)
Q Consensus 250 ----~------~~~f~~l~~L~~L~Ls~N~l~~i~~l~--~~~~~~l~~L~~L~Ls~N~l~~lp~--------------- 302 (594)
+ ..++.+|++|+..+||.|.+..- ..+ ...++.-..|++|.|++|.+..+..
T Consensus 74 kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~-~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKK 152 (388)
T COG5238 74 KDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSE-FPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKK 152 (388)
T ss_pred HHHHHHHHHHHHHHHhcCCcceeeeccccccCcc-cchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhh
Confidence 1 12345778888888888887531 111 2344677888888888888764431
Q ss_pred cCCCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCC--CChhhh---ccCCCCcEEECCCCCCCCC
Q psy6452 303 FLNFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFES--MPLCLQ---VHFCKLVKLDISHNQIKIL 375 (594)
Q Consensus 303 ~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~--i~~~~~---~~l~~L~~L~Ls~N~l~~l 375 (594)
..+-|.|+...+..|++..-|....... +..-..|+.+.+.+|.|.. +..-+| ..+.+|+.|||.+|.++..
T Consensus 153 aa~kp~Le~vicgrNRlengs~~~~a~~-l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~ 229 (388)
T COG5238 153 AADKPKLEVVICGRNRLENGSKELSAAL-LESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLE 229 (388)
T ss_pred hccCCCceEEEeccchhccCcHHHHHHH-HHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhh
Confidence 2355788889999998887654433221 1222578888888888872 333322 2567888888888887753
No 59
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.94 E-value=2.2e-05 Score=68.89 Aligned_cols=123 Identities=15% Similarity=0.199 Sum_probs=70.4
Q ss_pred ccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCC--CcC
Q psy6452 227 NCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELP--DFL 304 (594)
Q Consensus 227 ~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp--~~~ 304 (594)
..+|.++.+|+.+.+.. .+..+....|.++++|+.+.+..+ +. .++..+|..+++|+.+.+.. .+..++ .|.
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~---~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~ 78 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LT---SIGDNAFSNCKSLESITFPN-NLKSIGDNAFS 78 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TS---CE-TTTTTT-TT-EEEEETS-TT-EE-TTTTT
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-cc---ccceeeeecccccccccccc-ccccccccccc
Confidence 34677788999999885 788999999999999999999875 43 46778888888899999976 555444 477
Q ss_pred CCcCccEEeccCCccccCchhhhhccccccCCCcceEEcCCCCCCCCChhhhccCCCCc
Q psy6452 305 NFKVLKELDISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFESMPLCLQVHFCKLV 363 (594)
Q Consensus 305 ~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~~i~~~~~~~l~~L~ 363 (594)
.+++|+.+++..+ ++.++...+.. .+|+.+.+.. .+..++...|.++++|+
T Consensus 79 ~~~~l~~i~~~~~-~~~i~~~~f~~------~~l~~i~~~~-~~~~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 79 NCTNLKNIDIPSN-ITEIGSSSFSN------CNLKEINIPS-NITKIEENAFKNCTKLK 129 (129)
T ss_dssp T-TTECEEEETTT--BEEHTTTTTT-------T--EEE-TT-B-SS----GGG------
T ss_pred ccccccccccCcc-ccEEchhhhcC------CCceEEEECC-CccEECCccccccccCC
Confidence 7899999999775 66666554422 2677777765 67778888887777764
No 60
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.94 E-value=2.6e-05 Score=80.73 Aligned_cols=82 Identities=17% Similarity=0.298 Sum_probs=50.5
Q ss_pred cccCcccEEECcCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCccccccCCCcceEeCCCCcCcccccc
Q psy6452 404 QEFLCLKELNMSSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQD 483 (594)
Q Consensus 404 ~~~~~L~~L~Ls~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~ 483 (594)
..+.+++.|++++|. ...+|. ...+|+.|.++++.--...|..+ ..+|+.|++++|
T Consensus 49 ~~~~~l~~L~Is~c~--L~sLP~------------LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C-------- 104 (426)
T PRK15386 49 EEARASGRLYIKDCD--IESLPV------------LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC-------- 104 (426)
T ss_pred HHhcCCCEEEeCCCC--CcccCC------------CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCc--------
Confidence 346888899998873 344441 12368888888754434444433 257888888876
Q ss_pred cccccccCcccccCCCCCcEEeCccccC---cccccc
Q psy6452 484 FVNVLWELPLSILYLSSIQELHLSNVQL---NCIPED 517 (594)
Q Consensus 484 ~~n~~~~ip~~~~~l~~L~~L~Ls~N~l---~~ip~~ 517 (594)
..+..+|. +|+.|+++.+.+ ..+|..
T Consensus 105 --s~L~sLP~------sLe~L~L~~n~~~~L~~LPss 133 (426)
T PRK15386 105 --PEISGLPE------SVRSLEIKGSATDSIKNVPNG 133 (426)
T ss_pred --cccccccc------ccceEEeCCCCCcccccCcch
Confidence 34555663 567777776654 345543
No 61
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.73 E-value=7.1e-05 Score=65.65 Aligned_cols=120 Identities=17% Similarity=0.243 Sum_probs=67.8
Q ss_pred ccccccCCCcceEeCCCCcCcccccccccccccCc-ccccCCCCCcEEeCccccCcccccc-ccCCCCCcEEEccCCCCc
Q psy6452 458 VSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELP-LSILYLSSIQELHLSNVQLNCIPED-IGNLICLEKLNISHNKVY 535 (594)
Q Consensus 458 ~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip-~~~~~l~~L~~L~Ls~N~l~~ip~~-~~~l~~L~~L~Ls~N~l~ 535 (594)
...|.++.+|+.+.+.+. +..++ ..|.++++|+.+.+.++ +..++.. |.++++|+.+.+.+ .+.
T Consensus 5 ~~~F~~~~~l~~i~~~~~------------~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~ 70 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPNT------------IKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLK 70 (129)
T ss_dssp TTTTTT-TT--EEEETST--------------EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-
T ss_pred HHHHhCCCCCCEEEECCC------------eeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccc
Confidence 355667777777777642 22332 34566778889988875 7777665 88888899999976 666
Q ss_pred ccCc-cccCCCCCCEEECcCCCCCccCcc-cccCCCCcEEEccCCCCcccCHhHHhhhhCC
Q psy6452 536 KLPE-SFANLKSLKILDVSYNKLTMLPDG-FVMLSNLTTFYAQRKYWMFLTISLLCYLMGL 594 (594)
Q Consensus 536 ~lp~-~~~~l~~L~~L~Ls~N~l~~ip~~-l~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L 594 (594)
.++. .|..+++|+.+++..+ ++.++.. |... +|+.+.+.. .++.++...|.+..+|
T Consensus 71 ~i~~~~F~~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 71 SIGDNAFSNCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp EE-TTTTTT-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred ccccccccccccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 6655 7788899999999876 7777655 7776 999999886 6888899998877654
No 62
>KOG2739|consensus
Probab=97.41 E-value=9.3e-05 Score=70.98 Aligned_cols=94 Identities=23% Similarity=0.306 Sum_probs=65.9
Q ss_pred cccCccCCCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCC---CCCC
Q psy6452 226 LNCCNKQYHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLS---ELPD 302 (594)
Q Consensus 226 ~~~~~~~l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~---~lp~ 302 (594)
+..++..+..|+.|.+.+..++.+.. |-.+++|++|.+|.|.+.....++.-+ ..+++|++|+++.|+|. +++.
T Consensus 35 ~~gl~d~~~~le~ls~~n~gltt~~~--~P~Lp~LkkL~lsdn~~~~~~~l~vl~-e~~P~l~~l~ls~Nki~~lstl~p 111 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLTTLTN--FPKLPKLKKLELSDNYRRVSGGLEVLA-EKAPNLKVLNLSGNKIKDLSTLRP 111 (260)
T ss_pred cccccccccchhhhhhhccceeeccc--CCCcchhhhhcccCCcccccccceehh-hhCCceeEEeecCCccccccccch
Confidence 44455566778888888888877765 557888899999988443222344333 35588999999999877 4455
Q ss_pred cCCCcCccEEeccCCccccC
Q psy6452 303 FLNFKVLKELDISHNNFESM 322 (594)
Q Consensus 303 ~~~l~~L~~L~Ls~N~l~~l 322 (594)
+..+.+|..|++.+|..+.+
T Consensus 112 l~~l~nL~~Ldl~n~~~~~l 131 (260)
T KOG2739|consen 112 LKELENLKSLDLFNCSVTNL 131 (260)
T ss_pred hhhhcchhhhhcccCCcccc
Confidence 66777788888888876653
No 63
>KOG3665|consensus
Probab=97.39 E-value=0.00013 Score=81.92 Aligned_cols=120 Identities=20% Similarity=0.078 Sum_probs=74.9
Q ss_pred CCcceEEcCCCCCCCCC-hhhhccCCCCcEEECCCCCCCCCCCccccCCccEEeCCCCCCCCCCchhhhcccCcccEEEC
Q psy6452 336 YKHSQSDISHNNFESMP-LCLQVHFCKLVKLDISHNQIKILHKPRCTHTLQTFSMNHNIGMKIPEWFWYQEFLCLKELNM 414 (594)
Q Consensus 336 ~~L~~L~Ls~N~l~~i~-~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~L~~N~~~~ip~~~~~~~~~~L~~L~L 414 (594)
++|+.|.+++-.+..-. ...+.++++|..||+|+.+++.+......++|+.|.+.+=.+..-......-.+++|+.||+
T Consensus 148 PsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDI 227 (699)
T KOG3665|consen 148 PSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLSGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDI 227 (699)
T ss_pred cccceEEecCceecchhHHHHhhccCccceeecCCCCccCcHHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeeec
Confidence 56666666555443221 23345778888888888888877666667778877777766665554444457899999999
Q ss_pred cCCCCccCCccHHHhhhcccccccccCCCcEEEcCCccccccCcc
Q psy6452 415 SSTDPFFEHLPIWLLNHMELKENGVFSNLISLHMQNTAAVMSNVS 459 (594)
Q Consensus 415 s~n~~~~~~lp~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 459 (594)
|......+. ..+....+ ....+++|+.||.+++.+.....+
T Consensus 228 S~~~~~~~~--~ii~qYle--c~~~LpeLrfLDcSgTdi~~~~le 268 (699)
T KOG3665|consen 228 SRDKNNDDT--KIIEQYLE--CGMVLPELRFLDCSGTDINEEILE 268 (699)
T ss_pred cccccccch--HHHHHHHH--hcccCccccEEecCCcchhHHHHH
Confidence 986533333 22223322 223467888888887766554433
No 64
>KOG2123|consensus
Probab=97.36 E-value=1e-05 Score=77.65 Aligned_cols=82 Identities=23% Similarity=0.237 Sum_probs=63.6
Q ss_pred CCcccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCC---cCCCcCc
Q psy6452 233 YHDIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPD---FLNFKVL 309 (594)
Q Consensus 233 l~~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~---~~~l~~L 309 (594)
+.+++.|++-++.|++|.- ...|+.|++|.||-|+|+.+. -+..+++|++|+|..|.|.++.+ +.++++|
T Consensus 18 l~~vkKLNcwg~~L~DIsi--c~kMp~lEVLsLSvNkIssL~-----pl~rCtrLkElYLRkN~I~sldEL~YLknlpsL 90 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDISI--CEKMPLLEVLSLSVNKISSLA-----PLQRCTRLKELYLRKNCIESLDELEYLKNLPSL 90 (388)
T ss_pred HHHhhhhcccCCCccHHHH--HHhcccceeEEeeccccccch-----hHHHHHHHHHHHHHhcccccHHHHHHHhcCchh
Confidence 5678888888888888754 678888888888888866642 24678888888888888887764 4578888
Q ss_pred cEEeccCCcccc
Q psy6452 310 KELDISHNNFES 321 (594)
Q Consensus 310 ~~L~Ls~N~l~~ 321 (594)
+.|.|..|.-.+
T Consensus 91 r~LWL~ENPCc~ 102 (388)
T KOG2123|consen 91 RTLWLDENPCCG 102 (388)
T ss_pred hhHhhccCCccc
Confidence 888888886543
No 65
>KOG3665|consensus
Probab=97.31 E-value=0.00022 Score=79.96 Aligned_cols=107 Identities=24% Similarity=0.242 Sum_probs=51.2
Q ss_pred cCCCcEEEcCCccccccC-ccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCcccc--c
Q psy6452 440 FSNLISLHMQNTAAVMSN-VSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIP--E 516 (594)
Q Consensus 440 ~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip--~ 516 (594)
+|+|+.|.+.+-.+.... ...+..+++|..||+|+. .+..+ .+++++++|+.|.+.+=.+..-. .
T Consensus 147 LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~T-----------nI~nl-~GIS~LknLq~L~mrnLe~e~~~~l~ 214 (699)
T KOG3665|consen 147 LPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGT-----------NISNL-SGISRLKNLQVLSMRNLEFESYQDLI 214 (699)
T ss_pred CcccceEEecCceecchhHHHHhhccCccceeecCCC-----------CccCc-HHHhccccHHHHhccCCCCCchhhHH
Confidence 344444444444332221 222344555555555552 12222 34455555555555555554322 1
Q ss_pred cccCCCCCcEEEccCCCCcccC-------ccccCCCCCCEEECcCCCCC
Q psy6452 517 DIGNLICLEKLNISHNKVYKLP-------ESFANLKSLKILDVSYNKLT 558 (594)
Q Consensus 517 ~~~~l~~L~~L~Ls~N~l~~lp-------~~~~~l~~L~~L~Ls~N~l~ 558 (594)
.+.+|++|+.||+|......-+ +....+++|+.||.|++.+.
T Consensus 215 ~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 215 DLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred HHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 2445666666666655443211 12234666677777666666
No 66
>KOG2123|consensus
Probab=97.14 E-value=2.7e-05 Score=74.93 Aligned_cols=103 Identities=28% Similarity=0.230 Sum_probs=80.2
Q ss_pred hcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCCCCCCcCCCcCccEEeccCCccccCchhhhhcccccc
Q psy6452 255 QKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLSELPDFLNFKVLKELDISHNNFESMPLCLQVHFYVHI 334 (594)
Q Consensus 255 ~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~~~~ 334 (594)
+.+.+.+.|+.-++.|++| +++..++.|++|.||-|+|+++..|..+++|++|+|..|.|.++.+-. ++..
T Consensus 16 sdl~~vkKLNcwg~~L~DI-----sic~kMp~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~sldEL~----YLkn 86 (388)
T KOG2123|consen 16 SDLENVKKLNCWGCGLDDI-----SICEKMPLLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIESLDELE----YLKN 86 (388)
T ss_pred hHHHHhhhhcccCCCccHH-----HHHHhcccceeEEeeccccccchhHHHHHHHHHHHHHhcccccHHHHH----HHhc
Confidence 3467788999999998885 566799999999999999999999999999999999999999876322 3344
Q ss_pred CCCcceEEcCCCCCCC-----CChhhhccCCCCcEEE
Q psy6452 335 PYKHSQSDISHNNFES-----MPLCLQVHFCKLVKLD 366 (594)
Q Consensus 335 ~~~L~~L~Ls~N~l~~-----i~~~~~~~l~~L~~L~ 366 (594)
.++|+.|-|..|.-.+ .-..++.-+++|+.||
T Consensus 87 lpsLr~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 87 LPSLRTLWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred CchhhhHhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 4677777777776553 2233455677777775
No 67
>KOG2739|consensus
Probab=97.12 E-value=0.00038 Score=66.82 Aligned_cols=79 Identities=28% Similarity=0.354 Sum_probs=47.2
Q ss_pred CCCCCcEEeCccc--cCc-cccccccCCCCCcEEEccCCCCcccC--ccccCCCCCCEEECcCCCCCccCc----ccccC
Q psy6452 497 YLSSIQELHLSNV--QLN-CIPEDIGNLICLEKLNISHNKVYKLP--ESFANLKSLKILDVSYNKLTMLPD----GFVML 567 (594)
Q Consensus 497 ~l~~L~~L~Ls~N--~l~-~ip~~~~~l~~L~~L~Ls~N~l~~lp--~~~~~l~~L~~L~Ls~N~l~~ip~----~l~~l 567 (594)
.+++|+.|.++.| +++ .++.-...+++|++|+|++|+|+.+. ..+..+.+|..||+.+|..+.+-+ .|.-+
T Consensus 63 ~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~l~dyre~vf~ll 142 (260)
T KOG2739|consen 63 KLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTNLDDYREKVFLLL 142 (260)
T ss_pred CcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhhhhcccCCccccccHHHHHHHHh
Confidence 3567777777777 333 33333445577777777777776431 135566677777777776664311 14555
Q ss_pred CCCcEEEc
Q psy6452 568 SNLTTFYA 575 (594)
Q Consensus 568 ~~L~~L~L 575 (594)
++|++|+-
T Consensus 143 ~~L~~LD~ 150 (260)
T KOG2739|consen 143 PSLKYLDG 150 (260)
T ss_pred hhhccccc
Confidence 66666553
No 68
>KOG4341|consensus
Probab=96.99 E-value=4.2e-05 Score=77.56 Aligned_cols=79 Identities=16% Similarity=0.155 Sum_probs=51.4
Q ss_pred CCCCCcEEeCccccCc-c-----ccccccCCCCCcEEEccCCCCc--ccCccccCCCCCCEEECcCCC-CC--ccCcccc
Q psy6452 497 YLSSIQELHLSNVQLN-C-----IPEDIGNLICLEKLNISHNKVY--KLPESFANLKSLKILDVSYNK-LT--MLPDGFV 565 (594)
Q Consensus 497 ~l~~L~~L~Ls~N~l~-~-----ip~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~Ls~N~-l~--~ip~~l~ 565 (594)
+++.|+.|.|+++.+. + +...-..+..|+.|.|++.... ..-+.+..+++|+.+++-+++ ++ .|...-.
T Consensus 370 ~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~vtk~~i~~~~~ 449 (483)
T KOG4341|consen 370 NCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQDVTKEAISRFAT 449 (483)
T ss_pred CCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhhhhhhhhHHHHh
Confidence 5778999999988543 2 2223456778888888888765 222356677888888888773 33 3333345
Q ss_pred cCCCCcEEEc
Q psy6452 566 MLSNLTTFYA 575 (594)
Q Consensus 566 ~l~~L~~L~L 575 (594)
++|++++..+
T Consensus 450 ~lp~i~v~a~ 459 (483)
T KOG4341|consen 450 HLPNIKVHAY 459 (483)
T ss_pred hCccceehhh
Confidence 6777776554
No 69
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.94 E-value=0.0024 Score=37.07 Aligned_cols=14 Identities=50% Similarity=0.698 Sum_probs=5.3
Q ss_pred CEEECcCCCCCccC
Q psy6452 548 KILDVSYNKLTMLP 561 (594)
Q Consensus 548 ~~L~Ls~N~l~~ip 561 (594)
++|||++|+|+.||
T Consensus 3 ~~Ldls~n~l~~ip 16 (22)
T PF00560_consen 3 EYLDLSGNNLTSIP 16 (22)
T ss_dssp SEEEETSSEESEEG
T ss_pred cEEECCCCcCEeCC
Confidence 33333333333333
No 70
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.86 E-value=0.0032 Score=36.58 Aligned_cols=19 Identities=42% Similarity=0.716 Sum_probs=9.6
Q ss_pred CcEEEccCCCCcccCcccc
Q psy6452 524 LEKLNISHNKVYKLPESFA 542 (594)
Q Consensus 524 L~~L~Ls~N~l~~lp~~~~ 542 (594)
|++|+|++|+|+.||.+|+
T Consensus 2 L~~Ldls~n~l~~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSSFS 20 (22)
T ss_dssp ESEEEETSSEESEEGTTTT
T ss_pred ccEEECCCCcCEeCChhhc
Confidence 4555555555555544443
No 71
>KOG0473|consensus
Probab=95.62 E-value=0.0003 Score=66.17 Aligned_cols=86 Identities=15% Similarity=0.152 Sum_probs=59.6
Q ss_pred cCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccCccccCCCCCCEEECcCCCCCccCcccccCCCCcEEEc
Q psy6452 496 LYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLPESFANLKSLKILDVSYNKLTMLPDGFVMLSNLTTFYA 575 (594)
Q Consensus 496 ~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L 575 (594)
..+...+.||++.|++..+-..|+-++.|..|+++.|++..+|..+..+..+..+++..|..+..|.++...+.++++++
T Consensus 39 ~~~kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~e~ 118 (326)
T KOG0473|consen 39 ASFKRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKNEQ 118 (326)
T ss_pred hccceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcchhhh
Confidence 34456667777777766666566666777777777777777777777666777777777777777777777777777777
Q ss_pred cCCCCc
Q psy6452 576 QRKYWM 581 (594)
Q Consensus 576 ~~N~l~ 581 (594)
.+|++.
T Consensus 119 k~~~~~ 124 (326)
T KOG0473|consen 119 KKTEFF 124 (326)
T ss_pred ccCcch
Confidence 777643
No 72
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.11 E-value=0.018 Score=34.86 Aligned_cols=23 Identities=17% Similarity=0.073 Sum_probs=16.8
Q ss_pred CCCCcEEEccCCCCcccCHhHHh
Q psy6452 567 LSNLTTFYAQRKYWMFLTISLLC 589 (594)
Q Consensus 567 l~~L~~L~L~~N~l~~l~~~~~~ 589 (594)
+++|++|+|++|+|+.+|.++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 45677777777777777777765
No 73
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.11 E-value=0.018 Score=34.86 Aligned_cols=23 Identities=17% Similarity=0.073 Sum_probs=16.8
Q ss_pred CCCCcEEEccCCCCcccCHhHHh
Q psy6452 567 LSNLTTFYAQRKYWMFLTISLLC 589 (594)
Q Consensus 567 l~~L~~L~L~~N~l~~l~~~~~~ 589 (594)
+++|++|+|++|+|+.+|.++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 45677777777777777777765
No 74
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=94.86 E-value=0.016 Score=31.21 Aligned_cols=13 Identities=54% Similarity=0.744 Sum_probs=4.0
Q ss_pred CCEEECcCCCCCc
Q psy6452 547 LKILDVSYNKLTM 559 (594)
Q Consensus 547 L~~L~Ls~N~l~~ 559 (594)
|+.|+|++|+|++
T Consensus 3 L~~L~l~~n~L~~ 15 (17)
T PF13504_consen 3 LRTLDLSNNRLTS 15 (17)
T ss_dssp -SEEEETSS--SS
T ss_pred cCEEECCCCCCCC
Confidence 3344444443333
No 75
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=94.37 E-value=0.025 Score=30.49 Aligned_cols=16 Identities=38% Similarity=0.692 Sum_probs=6.7
Q ss_pred CCcEEEccCCCCcccC
Q psy6452 523 CLEKLNISHNKVYKLP 538 (594)
Q Consensus 523 ~L~~L~Ls~N~l~~lp 538 (594)
+|+.|+|++|+|+++|
T Consensus 2 ~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSLP 17 (17)
T ss_dssp T-SEEEETSS--SSE-
T ss_pred ccCEEECCCCCCCCCc
Confidence 4555555555555543
No 76
>KOG4341|consensus
Probab=94.15 E-value=0.0054 Score=62.70 Aligned_cols=106 Identities=16% Similarity=0.147 Sum_probs=52.0
Q ss_pred CCCcEEEcCCcccccc--CccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCc--cccc
Q psy6452 441 SNLISLHMQNTAAVMS--NVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLN--CIPE 516 (594)
Q Consensus 441 ~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~--~ip~ 516 (594)
+.|+.+++..+..... ..+.-.+++.|+.|.++.+...... -+..+..+-..+..|..|.|+++... ..-+
T Consensus 346 ~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~-----gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le 420 (483)
T KOG4341|consen 346 PHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDE-----GIRHLSSSSCSLEGLEVLELDNCPLITDATLE 420 (483)
T ss_pred hhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhh-----hhhhhhhccccccccceeeecCCCCchHHHHH
Confidence 3455555544433221 1222234566666666654322111 00111122234567778888887654 3334
Q ss_pred cccCCCCCcEEEccCCCCc---ccCccccCCCCCCEEE
Q psy6452 517 DIGNLICLEKLNISHNKVY---KLPESFANLKSLKILD 551 (594)
Q Consensus 517 ~~~~l~~L~~L~Ls~N~l~---~lp~~~~~l~~L~~L~ 551 (594)
.+..+++|+.++|-..+-- .+...-..++++++..
T Consensus 421 ~l~~c~~Leri~l~~~q~vtk~~i~~~~~~lp~i~v~a 458 (483)
T KOG4341|consen 421 HLSICRNLERIELIDCQDVTKEAISRFATHLPNIKVHA 458 (483)
T ss_pred HHhhCcccceeeeechhhhhhhhhHHHHhhCccceehh
Confidence 4667778888877776532 2222234556665543
No 77
>KOG4308|consensus
Probab=94.14 E-value=0.00099 Score=71.65 Aligned_cols=140 Identities=20% Similarity=0.186 Sum_probs=85.4
Q ss_pred CCcEEEcCCccccccCcc----ccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCcc----
Q psy6452 442 NLISLHMQNTAAVMSNVS----QLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNC---- 513 (594)
Q Consensus 442 ~L~~L~l~~n~l~~~~~~----~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~---- 513 (594)
.+++|++..|.++..... .+.....++.++++.|.+..... .-....++..+....++++|.+++|.++.
T Consensus 145 ~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~--~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~ 222 (478)
T KOG4308|consen 145 LLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGL--LVLSQALESAASPLSSLETLKLSRCGVTSSSCA 222 (478)
T ss_pred HHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhh--HHHhhhhhhhhcccccHHHHhhhhcCcChHHHH
Confidence 445566666666554332 33446677777777764431100 00111112223346788888888888872
Q ss_pred -ccccccCCCC-CcEEEccCCCCcc-----cCccccCC-CCCCEEECcCCCCC-----ccCcccccCCCCcEEEccCCCC
Q psy6452 514 -IPEDIGNLIC-LEKLNISHNKVYK-----LPESFANL-KSLKILDVSYNKLT-----MLPDGFVMLSNLTTFYAQRKYW 580 (594)
Q Consensus 514 -ip~~~~~l~~-L~~L~Ls~N~l~~-----lp~~~~~l-~~L~~L~Ls~N~l~-----~ip~~l~~l~~L~~L~L~~N~l 580 (594)
+...+...+. +..|++++|++.. +.+.+..+ ..++.++++.|.|+ .+.+.+..++.++++.+++|++
T Consensus 223 ~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l 302 (478)
T KOG4308|consen 223 LLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPL 302 (478)
T ss_pred HHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcc
Confidence 2223555555 7778888888872 23355555 67788899998888 2455566777888888888887
Q ss_pred ccc
Q psy6452 581 MFL 583 (594)
Q Consensus 581 ~~l 583 (594)
..-
T Consensus 303 ~~~ 305 (478)
T KOG4308|consen 303 TDY 305 (478)
T ss_pred ccH
Confidence 754
No 78
>KOG0473|consensus
Probab=93.93 E-value=0.002 Score=60.80 Aligned_cols=87 Identities=18% Similarity=0.173 Sum_probs=68.3
Q ss_pred cccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccccCccccccccCCCCCcEEEccCCCCcccCcc
Q psy6452 461 LKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNVQLNCIPEDIGNLICLEKLNISHNKVYKLPES 540 (594)
Q Consensus 461 ~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~lp~~ 540 (594)
+......+.||++.| .+-.+...|.-++.|..|+++.|.|..+|..+.....++.+++.+|..+..|.+
T Consensus 38 i~~~kr~tvld~~s~-----------r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s 106 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSN-----------RLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKS 106 (326)
T ss_pred hhccceeeeehhhhh-----------HHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCcc
Confidence 344455666666664 222333345556788899999999999999999999999999999999999999
Q ss_pred ccCCCCCCEEECcCCCCC
Q psy6452 541 FANLKSLKILDVSYNKLT 558 (594)
Q Consensus 541 ~~~l~~L~~L~Ls~N~l~ 558 (594)
+...+.++++++.+|.+.
T Consensus 107 ~~k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 107 QKKEPHPKKNEQKKTEFF 124 (326)
T ss_pred ccccCCcchhhhccCcch
Confidence 999999999999999876
No 79
>KOG4308|consensus
Probab=93.27 E-value=0.00087 Score=72.07 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=20.0
Q ss_pred CCCcEEeCccccCc-----cccccccCCCCCcEEEccCCCCc
Q psy6452 499 SSIQELHLSNVQLN-----CIPEDIGNLICLEKLNISHNKVY 535 (594)
Q Consensus 499 ~~L~~L~Ls~N~l~-----~ip~~~~~l~~L~~L~Ls~N~l~ 535 (594)
..++.++++.|.|+ .+...+..++.++.|.+++|.+.
T Consensus 262 ~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 262 ETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred hhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 34555666666555 23334445555556666655555
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=93.18 E-value=0.072 Score=32.15 Aligned_cols=21 Identities=10% Similarity=0.200 Sum_probs=12.2
Q ss_pred CcccEEEccCCCCcccchHhh
Q psy6452 234 HDIFTVNLSHQDINFVQESMS 254 (594)
Q Consensus 234 ~~L~~L~Ls~n~l~~l~~~~f 254 (594)
++|++|+|++|+|+.+|..+|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 345566666666666665555
No 81
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=93.18 E-value=0.072 Score=32.15 Aligned_cols=21 Identities=10% Similarity=0.200 Sum_probs=12.2
Q ss_pred CcccEEEccCCCCcccchHhh
Q psy6452 234 HDIFTVNLSHQDINFVQESMS 254 (594)
Q Consensus 234 ~~L~~L~Ls~n~l~~l~~~~f 254 (594)
++|++|+|++|+|+.+|..+|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 345566666666666665555
No 82
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=87.02 E-value=0.4 Score=28.87 Aligned_cols=18 Identities=61% Similarity=0.763 Sum_probs=12.5
Q ss_pred CCCCEEECcCCCCCccCc
Q psy6452 545 KSLKILDVSYNKLTMLPD 562 (594)
Q Consensus 545 ~~L~~L~Ls~N~l~~ip~ 562 (594)
++|+.|++++|+|+++|+
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 356777777777777765
No 83
>KOG3864|consensus
Probab=86.56 E-value=0.14 Score=47.80 Aligned_cols=83 Identities=23% Similarity=0.253 Sum_probs=59.0
Q ss_pred cccEEEccCCCCcccchHhhhcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCC-CCCC--CCCcCCCcCccE
Q psy6452 235 DIFTVNLSHQDINFVQESMSQKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHN-KLSE--LPDFLNFKVLKE 311 (594)
Q Consensus 235 ~L~~L~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N-~l~~--lp~~~~l~~L~~ 311 (594)
.++.+|-++..|..+.-.-+..++.++.|.+.++.=-+=..+ ..+-...++|+.|+|++| +|++ +.-+..+++|+.
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L-~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCL-ERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRR 180 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHH-HHhcccccchheeeccCCCeechhHHHHHHHhhhhHH
Confidence 578899999999988877788889999999888762110001 111124688999999988 6773 445667888888
Q ss_pred EeccCCc
Q psy6452 312 LDISHNN 318 (594)
Q Consensus 312 L~Ls~N~ 318 (594)
|.+.+=.
T Consensus 181 L~l~~l~ 187 (221)
T KOG3864|consen 181 LHLYDLP 187 (221)
T ss_pred HHhcCch
Confidence 8877644
No 84
>KOG4242|consensus
Probab=84.85 E-value=4.9 Score=42.44 Aligned_cols=64 Identities=22% Similarity=0.081 Sum_probs=34.3
Q ss_pred cCccEEeccCCcccc-CchhhhhccccccCCCcceEEcCCCCCC---CCChhhhccCCCCcEEECCCCCCC
Q psy6452 307 KVLKELDISHNNFES-MPLCLQVHFYVHIPYKHSQSDISHNNFE---SMPLCLQVHFCKLVKLDISHNQIK 373 (594)
Q Consensus 307 ~~L~~L~Ls~N~l~~-lp~~~~~~~~~~~~~~L~~L~Ls~N~l~---~i~~~~~~~l~~L~~L~Ls~N~l~ 373 (594)
..+.+++|+.|.... +|..+.. ...+..++.++.+...++ ...+..+..-++++..+++.|..+
T Consensus 214 ~~lteldls~n~~Kddip~~~n~---~a~~~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~s 281 (553)
T KOG4242|consen 214 LWLTELDLSTNGGKDDIPRTLNK---KAGTLVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGTS 281 (553)
T ss_pred ccccccccccCCCCccchhHHHH---hhhhhhhhcccccccccchhhcccccccccccccchhhhccCCCC
Confidence 346677777776664 5533221 122234556666665554 233333344557777777777654
No 85
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=84.05 E-value=0.93 Score=27.41 Aligned_cols=14 Identities=57% Similarity=0.724 Sum_probs=6.2
Q ss_pred CCCEEEcCCCCCCC
Q psy6452 286 NLIVLDLSHNKLSE 299 (594)
Q Consensus 286 ~L~~L~Ls~N~l~~ 299 (594)
+|+.|+|++|+|+.
T Consensus 3 ~L~~L~L~~NkI~~ 16 (26)
T smart00365 3 NLEELDLSQNKIKK 16 (26)
T ss_pred ccCEEECCCCccce
Confidence 34444444444443
No 86
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=82.50 E-value=1.2 Score=26.98 Aligned_cols=18 Identities=56% Similarity=0.698 Sum_probs=12.6
Q ss_pred CCCCCEEECCCCCCCCcc
Q psy6452 257 LTNLTVLDLSHNNHQDIN 274 (594)
Q Consensus 257 l~~L~~L~Ls~N~l~~i~ 274 (594)
+.+|+.|+|++|+|+.++
T Consensus 1 L~~L~~L~L~~NkI~~IE 18 (26)
T smart00365 1 LTNLEELDLSQNKIKKIE 18 (26)
T ss_pred CCccCEEECCCCccceec
Confidence 357788888888866543
No 87
>KOG1947|consensus
Probab=81.71 E-value=0.34 Score=52.43 Aligned_cols=78 Identities=22% Similarity=0.118 Sum_probs=38.9
Q ss_pred CCCCcEEeCcccc-Ccccc-cc-ccCCCCCcEEEccCCC-Cc--ccCccccCCCCCCEEECcCCCCC---ccCcccccCC
Q psy6452 498 LSSIQELHLSNVQ-LNCIP-ED-IGNLICLEKLNISHNK-VY--KLPESFANLKSLKILDVSYNKLT---MLPDGFVMLS 568 (594)
Q Consensus 498 l~~L~~L~Ls~N~-l~~ip-~~-~~~l~~L~~L~Ls~N~-l~--~lp~~~~~l~~L~~L~Ls~N~l~---~ip~~l~~l~ 568 (594)
+++|+.|+++++. ++..- .. ...+++|+.|.+.++. ++ .+-.....+++|++|+|+++... .+......++
T Consensus 242 ~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~ 321 (482)
T KOG1947|consen 242 CRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCP 321 (482)
T ss_pred cCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCc
Confidence 4566666666665 44221 11 2235667776666555 44 23223345566777777766332 1222233455
Q ss_pred CCcEEEc
Q psy6452 569 NLTTFYA 575 (594)
Q Consensus 569 ~L~~L~L 575 (594)
+|+.|.+
T Consensus 322 ~l~~l~~ 328 (482)
T KOG1947|consen 322 NLRELKL 328 (482)
T ss_pred chhhhhh
Confidence 5555443
No 88
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=81.40 E-value=1.1 Score=27.12 Aligned_cols=16 Identities=25% Similarity=0.534 Sum_probs=8.1
Q ss_pred CcceEEcCCCCCCCCC
Q psy6452 337 KHSQSDISHNNFESMP 352 (594)
Q Consensus 337 ~L~~L~Ls~N~l~~i~ 352 (594)
+|+.|++++|+++++|
T Consensus 3 ~L~~L~vs~N~Lt~LP 18 (26)
T smart00364 3 SLKELNVSNNQLTSLP 18 (26)
T ss_pred ccceeecCCCccccCc
Confidence 4455555555555444
No 89
>KOG3763|consensus
Probab=78.26 E-value=1.2 Score=47.69 Aligned_cols=64 Identities=30% Similarity=0.343 Sum_probs=34.6
Q ss_pred cCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCC--CCCCCCCcC--CCcCccEEeccCCccc
Q psy6452 256 KLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHN--KLSELPDFL--NFKVLKELDISHNNFE 320 (594)
Q Consensus 256 ~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N--~l~~lp~~~--~l~~L~~L~Ls~N~l~ 320 (594)
+.+.+..++|++|++..++.+.. +-...++|+.|+|++| .+..-+++. +...|++|-+.+|.+.
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~ss-lsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSS-LSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhH-HHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccc
Confidence 44556666666666655544432 2245566666677666 444333222 2234666666666665
No 90
>KOG3864|consensus
Probab=77.30 E-value=0.44 Score=44.48 Aligned_cols=82 Identities=20% Similarity=0.207 Sum_probs=51.1
Q ss_pred CCcEEEcCCccccccCccccccCCCcceEeCCCCcCcccccccccccccCcccccCCCCCcEEeCccc-cCcccc-cccc
Q psy6452 442 NLISLHMQNTAAVMSNVSQLKYLKNIKYLNCSNDIDHRKSQDFVNVLWELPLSILYLSSIQELHLSNV-QLNCIP-EDIG 519 (594)
Q Consensus 442 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~n~~~~ip~~~~~l~~L~~L~Ls~N-~l~~ip-~~~~ 519 (594)
.++.++-++..|.......+.+++.++.|.+.++...... -++.+-. -.++|+.|++++| +||+-. ..+.
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~-----~L~~l~~---~~~~L~~L~lsgC~rIT~~GL~~L~ 173 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDW-----CLERLGG---LAPSLQDLDLSGCPRITDGGLACLL 173 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhH-----HHHHhcc---cccchheeeccCCCeechhHHHHHH
Confidence 4566777777787777778888888888888776322110 0111111 1367888888877 566332 2356
Q ss_pred CCCCCcEEEccC
Q psy6452 520 NLICLEKLNISH 531 (594)
Q Consensus 520 ~l~~L~~L~Ls~ 531 (594)
.+++|+.|.|.+
T Consensus 174 ~lknLr~L~l~~ 185 (221)
T KOG3864|consen 174 KLKNLRRLHLYD 185 (221)
T ss_pred HhhhhHHHHhcC
Confidence 667777776664
No 91
>KOG1947|consensus
Probab=75.50 E-value=0.89 Score=49.15 Aligned_cols=87 Identities=20% Similarity=0.083 Sum_probs=60.2
Q ss_pred cccCCCCCcEEeCccc--cCcccc----ccccCCCCCcEEEccCCC-Cccc--CccccCCCCCCEEECcCCC-CC--ccC
Q psy6452 494 SILYLSSIQELHLSNV--QLNCIP----EDIGNLICLEKLNISHNK-VYKL--PESFANLKSLKILDVSYNK-LT--MLP 561 (594)
Q Consensus 494 ~~~~l~~L~~L~Ls~N--~l~~ip----~~~~~l~~L~~L~Ls~N~-l~~l--p~~~~~l~~L~~L~Ls~N~-l~--~ip 561 (594)
....++.|+.|+++++ .+...+ .....+++|+.|++++.. ++.. ......+++|+.|.+.++. ++ .+-
T Consensus 209 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~ 288 (482)
T KOG1947|consen 209 LALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLV 288 (482)
T ss_pred HHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHH
Confidence 3445778999999873 223222 234567999999999988 6633 2222347899999988886 67 343
Q ss_pred cccccCCCCcEEEccCCCC
Q psy6452 562 DGFVMLSNLTTFYAQRKYW 580 (594)
Q Consensus 562 ~~l~~l~~L~~L~L~~N~l 580 (594)
.....++.|++|+++++..
T Consensus 289 ~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 289 SIAERCPSLRELDLSGCHG 307 (482)
T ss_pred HHHHhcCcccEEeeecCcc
Confidence 3356788999999997654
No 92
>KOG3763|consensus
Probab=74.91 E-value=1.5 Score=47.11 Aligned_cols=61 Identities=28% Similarity=0.247 Sum_probs=41.2
Q ss_pred CCCCCcEEeCccccCccccc---cccCCCCCcEEEccCC--CCcccCc--cccCCCCCCEEECcCCCCC
Q psy6452 497 YLSSIQELHLSNVQLNCIPE---DIGNLICLEKLNISHN--KVYKLPE--SFANLKSLKILDVSYNKLT 558 (594)
Q Consensus 497 ~l~~L~~L~Ls~N~l~~ip~---~~~~l~~L~~L~Ls~N--~l~~lp~--~~~~l~~L~~L~Ls~N~l~ 558 (594)
+.+.+..++|++|+|..+.. --...++|+.|+||+| .+..-++ .+++ ..|+.|-+.+|.+.
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~-l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKG-LPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcC-CCHHHeeecCCccc
Confidence 34578888899998875532 2345688899999998 4443322 2333 45888889999887
No 93
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=74.09 E-value=1.4 Score=25.78 Aligned_cols=14 Identities=21% Similarity=0.140 Sum_probs=5.9
Q ss_pred CCCcEEEccCCCCc
Q psy6452 568 SNLTTFYAQRKYWM 581 (594)
Q Consensus 568 ~~L~~L~L~~N~l~ 581 (594)
++|++|+|++|+|+
T Consensus 2 ~~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 2 PNLETLDLSNNQIT 15 (24)
T ss_dssp TT-SEEE-TSSBEH
T ss_pred CCCCEEEccCCcCC
Confidence 34555555555544
No 94
>KOG4242|consensus
Probab=72.06 E-value=31 Score=36.72 Aligned_cols=86 Identities=17% Similarity=-0.060 Sum_probs=49.1
Q ss_pred CcccEEEccCCCCcccchHhh---hcCCCCCEEECCCCCCCCccccchhhhhcCCCCCEEEcCCCCCC-----CCC-C--
Q psy6452 234 HDIFTVNLSHQDINFVQESMS---QKLTNLTVLDLSHNNHQDINFVQESMSQKLTNLIVLDLSHNKLS-----ELP-D-- 302 (594)
Q Consensus 234 ~~L~~L~Ls~n~l~~l~~~~f---~~l~~L~~L~Ls~N~l~~i~~l~~~~~~~l~~L~~L~Ls~N~l~-----~lp-~-- 302 (594)
..+.+++|+.|....-.+... ..-.-++.++.+.-.+.--....+..++.-++|++.+++.|..+ ..+ .
T Consensus 214 ~~lteldls~n~~Kddip~~~n~~a~~~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~s~skg~Egg~~~k 293 (553)
T KOG4242|consen 214 LWLTELDLSTNGGKDDIPRTLNKKAGTLVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGTSPSKGEEGGGAEK 293 (553)
T ss_pred ccccccccccCCCCccchhHHHHhhhhhhhhcccccccccchhhcccccccccccccchhhhccCCCCcccccccccccc
Confidence 457888888887764333222 22345777777766543211122334455678888888888665 222 1
Q ss_pred --cCCCcCccEEeccCCccc
Q psy6452 303 --FLNFKVLKELDISHNNFE 320 (594)
Q Consensus 303 --~~~l~~L~~L~Ls~N~l~ 320 (594)
|+.-.++ +|++......
T Consensus 294 ~~fS~~~sg-hln~~~~~~p 312 (553)
T KOG4242|consen 294 DTFSPDPSG-HLNSRPRYTP 312 (553)
T ss_pred cccCcCccc-ccccccccCc
Confidence 4444566 6666666544
No 95
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=60.18 E-value=6.4 Score=24.11 Aligned_cols=14 Identities=7% Similarity=-0.161 Sum_probs=7.5
Q ss_pred CCcEEEccCCCCcc
Q psy6452 569 NLTTFYAQRKYWMF 582 (594)
Q Consensus 569 ~L~~L~L~~N~l~~ 582 (594)
+|++|+|++|.|..
T Consensus 3 ~L~~LdL~~N~i~~ 16 (28)
T smart00368 3 SLRELDLSNNKLGD 16 (28)
T ss_pred ccCEEECCCCCCCH
Confidence 45555555555543
No 96
>PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS). The interaction of RCC1 with ran probably plays an important role in the regulation of gene expression. RCC1, known as PRP20 or SRM1 in yeast, pim1 in fission yeast and BJ1 in Drosophila, is a protein that contains seven tandem repeats of a domain of about 50 to 60 amino acids. As shown in the following schematic representation, the repeats make up the major part of the length of the protein. Outside the repeat region, there is just a small N-terminal domain of about 40 to 50 residues and, in the Drosophila protein only, a C-terminal domain of about 130 residues. +----+-------+-------+-------+-------+-------+-------+-------+-------------+ |N-t.|Rpt. 1 |Rpt. 2 |Rpt. 3 |Rpt. 4 |Rpt. 5 |Rpt. 6 |Rpt. 7 | C-terminal | +----+-------+-------+-------+-------+-------+-------+-------+-------------+ The RCC1-type of repeat is also found in the X-linked retinitis pigmentosa GTPase regulator []. The RCC repeats form a beta-propeller structure.; PDB: 3MVD_L 3OF7_A 1I2M_D 1A12_B 3KCI_A 4DNV_B 4DNU_A 4D9S_B 4DNW_A.
Probab=46.81 E-value=5.1 Score=28.22 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=24.9
Q ss_pred cccccCccccccccccccCCCCCCCCCCCCCCCCCCCccccccccc
Q psy6452 6 YFWGRGLPLKLTETEEANNGTPEDNTDFGPDENEEPVPTQIDMEAD 51 (594)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (594)
|-||++..+.|- ...++....+|++++...+
T Consensus 5 y~wG~n~~GqLG---------------~~~~~~~~~~P~~v~~~~~ 35 (51)
T PF00415_consen 5 YSWGSNDYGQLG---------------SGGDNKNVSVPTKVPFLSG 35 (51)
T ss_dssp EEEEEETTSTTS---------------SSSSSSEEEEEEEEGGGTT
T ss_pred EEEECCCCCCCC---------------CCCCCCceeEEEEECCCCC
Confidence 789999988886 4455667788999988887
No 97
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=42.56 E-value=16 Score=47.20 Aligned_cols=32 Identities=31% Similarity=0.542 Sum_probs=29.6
Q ss_pred EccCCCCcccchHhhhcCCCCCEEECCCCCCC
Q psy6452 240 NLSHQDINFVQESMSQKLTNLTVLDLSHNNHQ 271 (594)
Q Consensus 240 ~Ls~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~ 271 (594)
||++|+|+.|+...|..+++|++|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 68999999999999999999999999999875
No 98
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=39.35 E-value=20 Score=46.31 Aligned_cols=32 Identities=31% Similarity=0.445 Sum_probs=15.7
Q ss_pred eccCCccccCchhhhhccccccCCCcceEEcCCCCCC
Q psy6452 313 DISHNNFESMPLCLQVHFYVHIPYKHSQSDISHNNFE 349 (594)
Q Consensus 313 ~Ls~N~l~~lp~~~~~~~~~~~~~~L~~L~Ls~N~l~ 349 (594)
||++|+|+.||...+..+ .+|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L-----~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANL-----CNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccC-----CCceEEEeeCCccc
Confidence 355555555555443321 34555555555544
No 99
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=20.24 E-value=73 Score=18.79 Aligned_cols=12 Identities=50% Similarity=0.501 Sum_probs=7.4
Q ss_pred CCCCEEECCCCC
Q psy6452 258 TNLTVLDLSHNN 269 (594)
Q Consensus 258 ~~L~~L~Ls~N~ 269 (594)
++|++|+|+++.
T Consensus 2 ~~L~~L~l~~C~ 13 (26)
T smart00367 2 PNLRELDLSGCT 13 (26)
T ss_pred CCCCEeCCCCCC
Confidence 456666666654
Done!