Query psy6453
Match_columns 282
No_of_seqs 43 out of 45
Neff 2.2
Searched_HMMs 29240
Date Fri Aug 16 18:17:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6453.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6453hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vk6_A E3 ubiquitin-protein li 100.0 5.3E-46 1.8E-50 297.1 3.3 95 95-200 1-97 (101)
2 1chc_A Equine herpes virus-1 r 97.6 6.9E-06 2.4E-10 56.0 -0.1 50 96-145 6-56 (68)
3 3hct_A TNF receptor-associated 97.6 4.6E-06 1.6E-10 63.5 -1.9 81 95-184 18-108 (118)
4 3knv_A TNF receptor-associated 97.4 4.7E-06 1.6E-10 66.7 -3.6 92 81-183 19-130 (141)
5 2ep4_A Ring finger protein 24; 97.4 1.2E-05 4.2E-10 55.8 -1.1 51 96-146 16-69 (74)
6 2ect_A Ring finger protein 126 97.4 4.5E-05 1.6E-09 53.4 1.6 47 95-141 15-64 (78)
7 2d8t_A Dactylidin, ring finger 97.4 7.6E-05 2.6E-09 51.8 2.3 46 95-141 15-61 (71)
8 2ecn_A Ring finger protein 141 97.3 1.8E-05 6.1E-10 54.4 -1.1 48 95-144 15-63 (70)
9 2csy_A Zinc finger protein 183 97.2 5.5E-05 1.9E-09 53.6 0.2 45 95-140 15-60 (81)
10 2vje_B MDM4 protein; proto-onc 97.2 9.4E-05 3.2E-09 51.6 1.4 51 95-145 7-60 (63)
11 2ysl_A Tripartite motif-contai 97.2 0.0001 3.5E-09 50.6 1.4 45 95-140 20-68 (73)
12 2kiz_A E3 ubiquitin-protein li 97.2 5.1E-05 1.8E-09 52.0 -0.4 47 95-141 14-63 (69)
13 1bor_A Transcription factor PM 97.2 0.00016 5.5E-09 49.0 2.0 42 96-140 7-48 (56)
14 4ayc_A E3 ubiquitin-protein li 97.1 0.00011 3.7E-09 57.4 1.3 45 96-141 54-99 (138)
15 4ap4_A E3 ubiquitin ligase RNF 97.1 3.6E-05 1.2E-09 57.1 -1.4 66 96-161 8-83 (133)
16 2ckl_B Ubiquitin ligase protei 97.1 8.9E-05 3E-09 59.0 0.8 47 95-141 54-102 (165)
17 2ecm_A Ring finger and CHY zin 97.1 5.1E-05 1.8E-09 49.6 -0.8 45 96-140 6-54 (55)
18 2ecy_A TNF receptor-associated 97.1 0.00011 3.6E-09 50.3 0.8 45 95-140 15-61 (66)
19 2djb_A Polycomb group ring fin 97.1 4.2E-05 1.5E-09 53.3 -1.3 47 95-141 15-62 (72)
20 2ecg_A Baculoviral IAP repeat- 97.1 9.9E-05 3.4E-09 52.4 0.4 44 96-143 26-70 (75)
21 1x4j_A Ring finger protein 38; 97.1 8.4E-05 2.9E-09 52.0 -0.1 45 96-140 24-71 (75)
22 3l11_A E3 ubiquitin-protein li 97.1 0.00019 6.4E-09 53.9 1.8 45 96-141 16-62 (115)
23 2yho_A E3 ubiquitin-protein li 97.1 0.00029 1E-08 51.3 2.8 47 96-146 19-66 (79)
24 2y43_A E3 ubiquitin-protein li 97.0 0.00012 4.2E-09 53.5 0.7 45 96-140 23-68 (99)
25 2ckl_A Polycomb group ring fin 97.0 0.00013 4.3E-09 54.4 0.7 47 95-141 15-62 (108)
26 2ct2_A Tripartite motif protei 97.0 0.00015 5.2E-09 51.0 1.1 46 95-140 15-67 (88)
27 2egp_A Tripartite motif-contai 97.0 0.00016 5.5E-09 50.1 1.0 45 95-140 12-64 (79)
28 2vje_A E3 ubiquitin-protein li 97.0 0.0002 6.8E-09 50.1 1.4 48 96-145 9-61 (64)
29 2ea6_A Ring finger protein 4; 97.0 3.2E-05 1.1E-09 52.1 -2.7 46 95-140 15-67 (69)
30 3hcs_A TNF receptor-associated 97.0 0.00011 3.7E-09 58.6 -0.2 80 95-183 18-107 (170)
31 2ea5_A Cell growth regulator w 96.9 0.00025 8.4E-09 50.5 1.5 47 96-146 16-63 (68)
32 2l0b_A E3 ubiquitin-protein li 96.9 0.00013 4.4E-09 53.5 0.0 45 96-140 41-88 (91)
33 3ng2_A RNF4, snurf, ring finge 96.9 3.9E-05 1.3E-09 52.3 -2.8 45 96-140 11-62 (71)
34 1rmd_A RAG1; V(D)J recombinati 96.9 8.7E-05 3E-09 55.7 -1.2 78 96-182 24-112 (116)
35 3lrq_A E3 ubiquitin-protein li 96.9 0.00015 5E-09 54.0 0.0 45 96-140 23-69 (100)
36 1iym_A EL5; ring-H2 finger, ub 96.9 0.00027 9.3E-09 46.2 1.3 45 96-140 6-54 (55)
37 4ic3_A E3 ubiquitin-protein li 96.9 0.00066 2.3E-08 48.2 3.4 46 96-145 25-71 (74)
38 2ecv_A Tripartite motif-contai 96.8 0.0003 1E-08 48.8 0.8 45 96-141 20-71 (85)
39 1g25_A CDK-activating kinase a 96.8 0.00011 3.8E-09 50.1 -1.4 45 96-141 4-55 (65)
40 1t1h_A Gspef-atpub14, armadill 96.8 0.00044 1.5E-08 48.3 1.5 45 95-140 8-54 (78)
41 3fl2_A E3 ubiquitin-protein li 96.7 0.00029 9.9E-09 53.6 0.5 45 96-141 53-99 (124)
42 2xeu_A Ring finger protein 4; 96.7 6.6E-05 2.2E-09 49.9 -2.9 45 96-140 4-55 (64)
43 2ecw_A Tripartite motif-contai 96.7 0.0004 1.4E-08 48.1 1.0 44 96-140 20-70 (85)
44 2yur_A Retinoblastoma-binding 96.6 0.00032 1.1E-08 49.3 0.2 48 95-143 15-66 (74)
45 1v87_A Deltex protein 2; ring- 96.6 0.0003 1E-08 52.3 -0.0 47 96-142 26-95 (114)
46 1jm7_A BRCA1, breast cancer ty 96.6 0.00043 1.5E-08 50.9 0.6 44 96-140 22-69 (112)
47 2ysj_A Tripartite motif-contai 96.6 0.00047 1.6E-08 46.5 0.7 39 96-135 21-63 (63)
48 2ecj_A Tripartite motif-contai 96.5 0.00035 1.2E-08 45.8 -0.2 40 95-135 15-58 (58)
49 1jm7_B BARD1, BRCA1-associated 96.5 0.00073 2.5E-08 51.2 1.5 43 96-140 23-66 (117)
50 3ztg_A E3 ubiquitin-protein li 96.5 0.00047 1.6E-08 49.5 0.1 45 95-140 13-61 (92)
51 1z6u_A NP95-like ring finger p 96.3 0.00083 2.9E-08 54.0 0.6 44 96-140 79-124 (150)
52 2ecl_A Ring-box protein 2; RNF 96.0 0.0017 6E-08 46.8 1.2 46 96-141 16-76 (81)
53 2y1n_A E3 ubiquitin-protein li 96.0 0.0014 4.9E-08 61.6 0.8 50 96-146 333-384 (389)
54 1e4u_A Transcriptional repress 95.6 0.0019 6.3E-08 47.4 -0.3 45 96-140 12-61 (78)
55 3dpl_R Ring-box protein 1; ubi 95.6 0.0038 1.3E-07 48.3 1.4 45 96-140 38-100 (106)
56 3t6p_A Baculoviral IAP repeat- 95.5 0.0075 2.6E-07 55.2 3.5 46 96-145 296-342 (345)
57 4ap4_A E3 ubiquitin ligase RNF 94.8 0.002 6.8E-08 47.6 -2.1 46 95-140 72-124 (133)
58 2c2l_A CHIP, carboxy terminus 94.3 0.011 3.6E-07 48.6 0.8 50 90-140 203-254 (281)
59 1wim_A KIAA0161 protein; ring 94.0 0.017 5.8E-07 42.1 1.3 31 95-125 5-37 (94)
60 4a0k_B E3 ubiquitin-protein li 93.7 0.018 6.1E-07 45.8 1.1 45 96-140 49-111 (117)
61 2jrp_A Putative cytoplasmic pr 93.1 0.022 7.6E-07 44.0 0.7 61 94-160 1-61 (81)
62 2kre_A Ubiquitin conjugation f 91.8 0.052 1.8E-06 41.1 1.3 47 93-140 27-74 (100)
63 2elx_A Zinc finger protein 406 90.3 0.23 7.9E-06 27.9 2.8 24 148-180 5-28 (35)
64 3htk_C E3 SUMO-protein ligase 90.3 0.075 2.6E-06 48.3 1.0 31 95-125 181-211 (267)
65 1va1_A Transcription factor SP 90.3 0.18 6.2E-06 29.5 2.4 27 147-180 5-31 (37)
66 1sp2_A SP1F2; zinc finger, tra 89.9 0.13 4.6E-06 28.5 1.5 18 163-180 8-25 (31)
67 1srk_A Zinc finger protein ZFP 89.9 0.28 9.5E-06 27.7 2.9 24 148-180 5-28 (35)
68 1bhi_A CRE-BP1, ATF-2; CRE bin 89.4 0.22 7.7E-06 28.8 2.3 26 148-180 4-29 (38)
69 2yu4_A E3 SUMO-protein ligase 89.4 0.048 1.6E-06 40.2 -0.8 58 95-175 7-66 (94)
70 1wgm_A Ubiquitin conjugation f 89.0 0.12 4.2E-06 38.9 1.2 45 95-140 22-68 (98)
71 2ab3_A ZNF29; zinc finger prot 88.5 0.31 1.1E-05 25.9 2.4 23 151-180 3-25 (29)
72 2eln_A Zinc finger protein 406 88.3 0.29 1E-05 31.1 2.4 26 148-180 7-32 (38)
73 1zfd_A SWI5; DNA binding motif 88.2 0.21 7E-06 27.8 1.5 18 163-180 9-26 (32)
74 3iuf_A Zinc finger protein UBI 87.5 0.3 1E-05 30.7 2.1 27 148-183 5-31 (48)
75 2kvf_A Zinc finger and BTB dom 87.4 0.36 1.2E-05 25.8 2.2 17 164-180 8-24 (28)
76 1rik_A E6APC1 peptide; E6-bind 87.4 0.35 1.2E-05 25.8 2.1 17 164-180 7-23 (29)
77 2kr4_A Ubiquitin conjugation f 87.0 0.077 2.6E-06 38.7 -1.0 45 95-140 14-59 (85)
78 2dlk_A Novel protein; ZF-C2H2 87.0 0.47 1.6E-05 31.3 2.9 18 163-180 44-61 (79)
79 2ept_A Zinc finger protein 32; 86.8 0.55 1.9E-05 27.6 2.9 24 148-180 8-31 (41)
80 2epa_A Krueppel-like factor 10 86.8 0.37 1.3E-05 31.6 2.3 27 147-180 14-40 (72)
81 1njq_A Superman protein; zinc- 86.7 0.61 2.1E-05 27.2 3.1 23 149-180 5-27 (39)
82 2m0d_A Zinc finger and BTB dom 86.6 0.43 1.5E-05 25.3 2.2 22 150-180 3-24 (30)
83 2emi_A Zinc finger protein 484 86.1 0.61 2.1E-05 28.1 2.9 25 147-180 9-33 (46)
84 2lv2_A Insulinoma-associated p 86.1 0.21 7E-06 36.6 0.8 28 147-183 53-80 (85)
85 2kvh_A Zinc finger and BTB dom 85.9 0.49 1.7E-05 25.3 2.2 17 164-180 8-24 (27)
86 2f42_A STIP1 homology and U-bo 85.9 0.17 5.7E-06 42.9 0.3 48 92-140 103-152 (179)
87 2m0f_A Zinc finger and BTB dom 85.9 0.49 1.7E-05 25.0 2.1 17 164-180 7-23 (29)
88 1rim_A E6APC2 peptide; E6-bind 85.7 0.36 1.2E-05 27.7 1.6 17 164-180 7-23 (33)
89 2epu_A Zinc finger protein 32; 85.5 0.62 2.1E-05 28.0 2.7 25 147-180 9-33 (45)
90 2ent_A Krueppel-like factor 15 85.5 0.72 2.5E-05 27.7 3.0 27 147-180 9-35 (48)
91 2drp_A Protein (tramtrack DNA- 85.5 0.41 1.4E-05 30.8 2.0 16 165-180 16-31 (66)
92 2kvg_A Zinc finger and BTB dom 85.3 0.53 1.8E-05 25.5 2.1 17 164-180 8-24 (27)
93 2el5_A Zinc finger protein 268 85.0 0.77 2.6E-05 27.0 2.9 24 148-180 8-31 (42)
94 2ytp_A Zinc finger protein 484 85.0 0.72 2.4E-05 27.9 2.8 25 147-180 9-33 (46)
95 2wbs_A Krueppel-like factor 4; 84.9 0.52 1.8E-05 31.5 2.3 26 148-180 3-28 (89)
96 2ema_A Zinc finger protein 347 84.9 0.75 2.6E-05 27.6 2.9 25 147-180 9-33 (46)
97 2em7_A Zinc finger protein 224 84.8 0.81 2.8E-05 27.5 3.0 25 147-180 9-33 (46)
98 2el4_A Zinc finger protein 268 84.6 0.79 2.7E-05 27.4 2.9 25 147-180 9-33 (46)
99 2epr_A POZ-, at HOOK-, and zin 84.6 0.75 2.6E-05 28.2 2.8 25 147-180 9-33 (48)
100 2ysp_A Zinc finger protein 224 84.5 0.74 2.5E-05 27.7 2.7 25 147-180 9-33 (46)
101 2epc_A Zinc finger protein 32; 84.4 0.81 2.8E-05 26.7 2.8 25 147-180 8-32 (42)
102 2ep0_A Zinc finger protein 28 84.3 0.76 2.6E-05 27.6 2.7 25 147-180 9-33 (46)
103 2emf_A Zinc finger protein 484 84.3 0.82 2.8E-05 27.6 2.9 25 147-180 9-33 (46)
104 2emy_A Zinc finger protein 268 84.3 0.7 2.4E-05 27.8 2.6 25 147-180 9-33 (46)
105 2elq_A Zinc finger protein 406 84.3 0.61 2.1E-05 26.5 2.2 24 148-180 7-30 (36)
106 2ytj_A Zinc finger protein 484 84.2 0.82 2.8E-05 27.5 2.8 25 147-180 9-33 (46)
107 2emb_A Zinc finger protein 473 84.1 0.91 3.1E-05 27.0 3.0 24 148-180 10-33 (44)
108 2yrj_A Zinc finger protein 473 84.0 0.8 2.7E-05 27.4 2.7 25 147-180 9-33 (46)
109 1ard_A Yeast transcription fac 84.0 0.42 1.4E-05 25.4 1.3 17 164-180 7-23 (29)
110 2yts_A Zinc finger protein 484 83.9 0.86 2.9E-05 27.3 2.8 25 147-180 9-33 (46)
111 2eml_A Zinc finger protein 28 83.9 0.89 3E-05 27.3 2.9 25 147-180 9-33 (46)
112 2em8_A Zinc finger protein 224 83.9 0.69 2.4E-05 27.9 2.4 25 147-180 9-33 (46)
113 2em3_A Zinc finger protein 28 83.9 0.78 2.7E-05 27.6 2.6 25 147-180 9-33 (46)
114 2ytf_A Zinc finger protein 268 83.8 0.78 2.7E-05 27.4 2.6 25 147-180 9-33 (46)
115 2epv_A Zinc finger protein 268 83.8 0.88 3E-05 27.3 2.9 25 147-180 9-33 (44)
116 2ene_A Zinc finger protein 347 83.7 0.89 3E-05 27.3 2.8 25 147-180 9-33 (46)
117 2en1_A Zinc finger protein 224 83.7 0.93 3.2E-05 27.2 2.9 25 147-180 9-33 (46)
118 2eq0_A Zinc finger protein 347 83.6 0.89 3E-05 27.3 2.8 25 147-180 9-33 (46)
119 2epw_A Zinc finger protein 268 83.5 0.85 2.9E-05 27.3 2.7 25 147-180 9-33 (46)
120 2emj_A Zinc finger protein 28 83.3 0.79 2.7E-05 27.7 2.5 25 147-180 9-33 (46)
121 2ep2_A Zinc finger protein 484 83.3 0.9 3.1E-05 27.3 2.7 25 147-180 9-33 (46)
122 2em5_A ZFP-95, zinc finger pro 83.2 0.93 3.2E-05 27.3 2.8 25 147-180 9-33 (46)
123 2ep3_A Zinc finger protein 484 83.2 0.92 3.1E-05 27.3 2.7 25 147-180 9-33 (46)
124 2eow_A Zinc finger protein 347 83.2 0.84 2.9E-05 27.3 2.6 25 147-180 9-33 (46)
125 2lvu_A Zinc finger and BTB dom 83.7 0.23 8E-06 26.4 0.0 17 164-180 7-23 (26)
126 2em4_A Zinc finger protein 28 83.1 0.81 2.8E-05 27.6 2.5 25 147-180 9-33 (46)
127 2em2_A Zinc finger protein 28 83.1 0.86 2.9E-05 27.5 2.6 25 147-180 9-33 (46)
128 2ytk_A Zinc finger protein 347 83.0 0.82 2.8E-05 27.5 2.5 25 147-180 9-33 (46)
129 2ebt_A Krueppel-like factor 5; 82.9 0.77 2.6E-05 31.3 2.6 27 147-180 12-38 (100)
130 2eme_A Zinc finger protein 473 82.7 1.1 3.6E-05 26.8 2.9 24 148-180 10-33 (46)
131 2emp_A Zinc finger protein 347 82.7 0.83 2.8E-05 27.5 2.4 25 147-180 9-33 (46)
132 2eor_A Zinc finger protein 224 82.7 0.8 2.7E-05 27.4 2.3 25 147-180 9-33 (46)
133 2em9_A Zinc finger protein 224 82.7 1.1 3.7E-05 26.8 2.9 25 147-180 9-33 (46)
134 2eof_A Zinc finger protein 268 82.7 0.99 3.4E-05 26.6 2.7 25 147-180 9-33 (44)
135 1ncs_A Peptide M30F, transcrip 82.6 0.66 2.3E-05 28.7 1.9 27 147-180 15-41 (47)
136 2el6_A Zinc finger protein 268 82.5 1.1 3.6E-05 27.1 2.8 25 147-180 9-33 (46)
137 2emx_A Zinc finger protein 268 82.5 0.89 3.1E-05 27.1 2.5 25 147-180 7-31 (44)
138 2enc_A Zinc finger protein 224 82.4 1 3.5E-05 27.1 2.7 24 148-180 10-33 (46)
139 2emm_A ZFP-95, zinc finger pro 82.4 0.97 3.3E-05 27.0 2.6 25 147-180 9-33 (46)
140 2lvr_A Zinc finger and BTB dom 83.1 0.26 8.9E-06 26.5 0.0 17 164-180 8-24 (30)
141 2elt_A Zinc finger protein 406 82.1 0.82 2.8E-05 25.7 2.1 24 148-180 7-30 (36)
142 2dmi_A Teashirt homolog 3; zin 82.1 1.1 3.8E-05 31.6 3.2 28 147-183 77-104 (115)
143 2j7j_A Transcription factor II 81.8 0.83 2.8E-05 30.0 2.3 27 147-180 28-54 (85)
144 2yu5_A Zinc finger protein 473 81.7 1.1 3.8E-05 26.6 2.7 25 147-180 9-33 (44)
145 2en6_A Zinc finger protein 268 81.6 1.1 3.7E-05 26.9 2.7 25 147-180 9-33 (46)
146 2eoj_A Zinc finger protein 268 81.5 0.83 2.8E-05 27.1 2.1 24 148-180 10-33 (44)
147 2ytg_A ZFP-95, zinc finger pro 81.4 0.81 2.8E-05 27.5 2.0 25 147-180 9-33 (46)
148 2els_A Zinc finger protein 406 81.3 0.91 3.1E-05 25.8 2.1 24 148-180 7-30 (36)
149 2dlk_A Novel protein; ZF-C2H2 81.3 0.87 3E-05 29.9 2.3 26 148-180 5-30 (79)
150 1x3c_A Zinc finger protein 292 81.3 0.81 2.8E-05 34.8 2.4 33 147-186 24-58 (73)
151 2ytd_A Zinc finger protein 473 81.2 1.1 3.8E-05 26.9 2.6 25 147-180 9-33 (46)
152 2en2_A B-cell lymphoma 6 prote 81.1 0.84 2.9E-05 26.8 2.0 25 147-180 8-32 (42)
153 1f2i_G Fusion of N-terminal 17 81.0 0.94 3.2E-05 29.6 2.4 27 147-180 16-42 (73)
154 2elp_A Zinc finger protein 406 81.0 0.89 3E-05 26.0 2.0 24 148-180 7-31 (37)
155 2en8_A Zinc finger protein 224 80.9 1.2 4.1E-05 26.6 2.7 25 147-180 9-33 (46)
156 2elv_A Zinc finger protein 406 80.9 0.96 3.3E-05 25.7 2.1 24 148-180 7-30 (36)
157 1bbo_A Human enhancer-binding 80.5 1 3.6E-05 27.9 2.3 25 147-180 26-50 (57)
158 1a1h_A QGSR zinc finger peptid 80.4 0.93 3.2E-05 30.3 2.2 18 163-180 10-27 (90)
159 2eoy_A Zinc finger protein 473 80.3 1.3 4.4E-05 26.7 2.6 25 147-180 9-33 (46)
160 2ct1_A Transcriptional repress 80.3 1.2 4.1E-05 29.6 2.7 26 149-183 44-69 (77)
161 2jne_A Hypothetical protein YF 80.0 0.47 1.6E-05 38.3 0.7 56 94-155 31-86 (101)
162 2adr_A ADR1; transcription reg 80.0 1.1 3.6E-05 28.2 2.3 28 147-183 27-54 (60)
163 2lvt_A Zinc finger and BTB dom 81.0 0.36 1.2E-05 26.0 0.0 17 164-180 7-23 (29)
164 2elm_A Zinc finger protein 406 79.5 1.2 4.2E-05 25.8 2.3 24 147-179 6-29 (37)
165 1x5w_A Zinc finger protein 64, 79.4 1.2 4E-05 29.1 2.4 28 147-183 34-61 (70)
166 2yte_A Zinc finger protein 473 79.2 1.8 6.2E-05 25.2 3.0 24 148-180 8-31 (42)
167 2elo_A Zinc finger protein 406 79.1 1.3 4.4E-05 25.2 2.3 24 148-180 7-30 (37)
168 2eox_A Zinc finger protein 473 79.1 0.95 3.2E-05 26.9 1.7 25 147-180 9-33 (44)
169 2lce_A B-cell lymphoma 6 prote 79.0 1.3 4.5E-05 29.1 2.6 24 148-180 43-66 (74)
170 2ctu_A Zinc finger protein 483 78.7 0.15 5.1E-06 32.8 -2.1 24 148-180 37-60 (73)
171 2j7j_A Transcription factor II 78.5 1.2 4.2E-05 29.1 2.3 23 151-180 2-24 (85)
172 2eps_A POZ-, at HOOK-, and zin 78.1 1.9 6.6E-05 27.2 3.1 28 147-183 9-36 (54)
173 1x6e_A Zinc finger protein 24; 77.8 1.7 5.7E-05 28.6 2.8 41 131-180 16-63 (72)
174 1yui_A GAGA-factor; complex (D 77.8 1.5 5.2E-05 27.6 2.5 25 147-180 21-45 (54)
175 2gli_A Protein (five-finger GL 77.7 1.2 4.3E-05 32.6 2.4 30 147-183 125-154 (155)
176 2elz_A Zinc finger protein 224 77.7 2.4 8.2E-05 25.4 3.3 24 148-180 10-33 (46)
177 2dlq_A GLI-kruppel family memb 77.5 1.5 5E-05 30.8 2.6 45 130-183 67-118 (124)
178 2d9h_A Zinc finger protein 692 77.4 1.9 6.4E-05 28.5 3.0 27 148-183 36-62 (78)
179 1bbo_A Human enhancer-binding 77.2 1.3 4.3E-05 27.5 2.0 18 164-181 6-23 (57)
180 2en3_A ZFP-95, zinc finger pro 77.0 1.4 4.7E-05 26.5 2.0 25 147-180 9-33 (46)
181 2eoz_A Zinc finger protein 473 77.0 1.4 4.7E-05 26.5 2.1 25 147-180 9-33 (46)
182 2eoo_A ZFP-95, zinc finger pro 76.9 1.4 4.9E-05 26.5 2.1 25 147-180 9-33 (46)
183 2adr_A ADR1; transcription reg 76.9 1.2 4.2E-05 27.9 1.9 18 164-181 7-24 (60)
184 2emh_A Zinc finger protein 484 76.8 1.4 4.9E-05 26.4 2.1 25 147-180 9-33 (46)
185 2epa_A Krueppel-like factor 10 76.8 1.4 4.8E-05 28.8 2.2 27 147-180 44-70 (72)
186 2yu8_A Zinc finger protein 347 76.7 1.3 4.5E-05 26.5 1.9 25 147-180 9-33 (46)
187 2ytn_A Zinc finger protein 347 76.6 2.6 9E-05 25.1 3.3 24 148-180 10-33 (46)
188 4gzn_C ZFP-57, zinc finger pro 76.6 1.5 5E-05 30.1 2.3 25 147-180 29-53 (60)
189 1x5w_A Zinc finger protein 64, 76.6 1.9 6.3E-05 28.1 2.7 25 148-181 7-31 (70)
190 2elr_A Zinc finger protein 406 76.5 1.9 6.5E-05 24.1 2.5 24 148-180 7-30 (36)
191 2yto_A Zinc finger protein 484 76.4 1.5 5.1E-05 26.4 2.1 25 147-180 9-33 (46)
192 2eq2_A Zinc finger protein 347 76.3 2.6 8.8E-05 25.2 3.2 24 148-180 10-33 (46)
193 2eos_A B-cell lymphoma 6 prote 76.3 2.3 8E-05 24.9 2.9 24 148-180 9-32 (42)
194 1p7a_A BF3, BKLF, kruppel-like 76.2 2 6.8E-05 24.3 2.5 18 163-180 15-32 (37)
195 1znf_A 31ST zinc finger from X 76.0 1.8 6.1E-05 22.6 2.1 17 164-180 6-22 (27)
196 2drp_A Protein (tramtrack DNA- 76.0 1.4 4.7E-05 28.2 1.9 28 147-183 37-64 (66)
197 2eoe_A Zinc finger protein 347 75.9 2.1 7.1E-05 25.5 2.7 24 148-180 10-33 (46)
198 2ct1_A Transcriptional repress 75.7 1.4 4.6E-05 29.3 1.9 28 147-183 12-39 (77)
199 3uk3_C Zinc finger protein 217 75.6 1.5 5E-05 27.2 1.9 28 147-183 29-56 (57)
200 2emg_A Zinc finger protein 484 75.6 2.7 9.2E-05 25.1 3.1 24 148-180 10-33 (46)
201 2fiy_A Protein FDHE homolog; F 75.3 2.9 0.0001 37.9 4.6 62 95-157 182-260 (309)
202 2eop_A Zinc finger protein 268 75.3 2.7 9.4E-05 25.0 3.1 24 148-180 10-33 (46)
203 2enh_A Zinc finger protein 28 75.3 2.7 9.3E-05 25.2 3.1 24 148-180 10-33 (46)
204 2epz_A Zinc finger protein 28 75.3 2.9 9.8E-05 25.0 3.2 24 148-180 10-33 (46)
205 2eq1_A Zinc finger protein 347 75.2 2.6 9E-05 25.1 3.0 25 147-180 9-33 (46)
206 2cot_A Zinc finger protein 435 75.2 2.3 7.8E-05 28.2 2.9 24 148-180 44-67 (77)
207 2jp9_A Wilms tumor 1; DNA bind 75.0 1.3 4.3E-05 31.0 1.7 18 163-180 42-59 (119)
208 2enf_A Zinc finger protein 347 74.9 2.8 9.6E-05 25.0 3.1 24 148-180 10-33 (46)
209 2epx_A Zinc finger protein 28 74.5 2.5 8.6E-05 25.1 2.8 27 148-183 10-36 (47)
210 1paa_A Yeast transcription fac 74.5 2 6.8E-05 22.9 2.1 21 163-183 6-26 (30)
211 2lt7_A Transcriptional regulat 74.3 2 7E-05 32.9 2.9 31 141-180 12-43 (133)
212 2en7_A Zinc finger protein 268 74.3 2.7 9.3E-05 24.6 2.8 17 164-180 17-33 (44)
213 2yth_A Zinc finger protein 224 74.2 3.4 0.00012 24.8 3.3 24 148-180 10-33 (46)
214 2em0_A Zinc finger protein 224 74.0 3.1 0.00011 24.8 3.1 24 148-180 10-33 (46)
215 2ytb_A Zinc finger protein 32; 74.0 2.3 8E-05 24.7 2.5 24 148-180 9-32 (42)
216 4gzn_C ZFP-57, zinc finger pro 74.0 2.3 7.7E-05 29.1 2.7 28 150-186 4-32 (60)
217 2ytr_A Zinc finger protein 347 73.8 2.9 0.0001 24.8 2.9 17 164-180 17-33 (46)
218 2epp_A POZ-, at HOOK-, and zin 73.7 2 6.7E-05 30.5 2.4 24 148-180 11-34 (66)
219 2yti_A Zinc finger protein 347 73.5 3.2 0.00011 24.8 3.1 17 164-180 17-33 (46)
220 2eom_A ZFP-95, zinc finger pro 73.2 3 0.0001 25.1 2.9 24 148-180 10-33 (46)
221 2ytq_A Zinc finger protein 268 73.1 3.4 0.00012 24.7 3.2 24 148-180 10-33 (46)
222 2eq4_A Zinc finger protein 224 73.1 3.3 0.00011 24.6 3.1 24 148-180 10-33 (46)
223 2ytm_A Zinc finger protein 28 73.0 2.7 9.2E-05 25.3 2.6 17 164-180 17-33 (46)
224 2ct7_A Ring finger protein 31; 72.9 1.9 6.4E-05 31.7 2.3 34 92-125 22-60 (86)
225 2en9_A Zinc finger protein 28 72.8 2.9 9.9E-05 25.1 2.8 24 148-180 10-33 (46)
226 2eoq_A Zinc finger protein 224 72.6 3.3 0.00011 24.7 3.0 24 148-180 10-33 (46)
227 2eov_A Zinc finger protein 484 72.4 3.2 0.00011 24.7 2.9 24 148-180 10-33 (46)
228 2ep1_A Zinc finger protein 484 72.4 3.6 0.00012 24.4 3.1 24 148-180 10-33 (46)
229 2emk_A Zinc finger protein 28 72.4 3.2 0.00011 24.8 2.9 24 148-180 10-33 (46)
230 3uk3_C Zinc finger protein 217 71.6 2.2 7.4E-05 26.3 2.0 18 163-180 8-25 (57)
231 2d8s_A Cellular modulator of i 71.6 0.64 2.2E-05 34.1 -0.5 46 96-141 16-70 (80)
232 1klr_A Zinc finger Y-chromosom 71.3 2.4 8.1E-05 22.2 1.9 19 163-181 6-24 (30)
233 2eq3_A Zinc finger protein 347 70.8 3.1 0.00011 24.7 2.6 24 148-180 10-33 (46)
234 2eon_A ZFP-95, zinc finger pro 70.7 3.8 0.00013 24.6 2.9 24 148-180 10-33 (46)
235 2eou_A Zinc finger protein 473 70.5 3.5 0.00012 24.5 2.7 24 148-180 10-33 (44)
236 2yrm_A B-cell lymphoma 6 prote 70.4 3.8 0.00013 24.4 2.9 17 164-180 15-31 (43)
237 1x6e_A Zinc finger protein 24; 70.2 2.4 8.3E-05 27.8 2.1 25 147-180 11-35 (72)
238 1mm2_A MI2-beta; PHD, zinc fin 70.1 3.1 0.00011 29.1 2.7 25 115-139 31-57 (61)
239 1f2i_G Fusion of N-terminal 17 70.0 2.5 8.5E-05 27.5 2.1 25 147-180 46-70 (73)
240 1zw8_A Zinc-responsive transcr 70.0 1.5 5.2E-05 30.5 1.1 22 162-183 6-29 (64)
241 2ely_A Zinc finger protein 224 69.9 3.6 0.00012 24.6 2.7 24 148-180 10-33 (46)
242 2yt9_A Zinc finger-containing 69.9 3.6 0.00012 27.7 3.0 27 149-184 64-90 (95)
243 2em6_A Zinc finger protein 224 69.6 4.5 0.00015 24.2 3.1 24 148-180 10-33 (46)
244 1z60_A TFIIH basal transcripti 69.1 1.6 5.5E-05 31.6 1.1 40 97-136 17-59 (59)
245 2eoh_A Zinc finger protein 28 68.8 4.5 0.00015 24.2 3.0 24 148-180 10-33 (46)
246 2ytt_A Zinc finger protein 473 68.5 3.4 0.00012 24.7 2.4 17 164-180 17-33 (46)
247 2rpc_A Zinc finger protein ZIC 68.5 3.5 0.00012 30.4 2.9 26 148-180 88-113 (155)
248 2epq_A POZ-, at HOOK-, and zin 68.3 3.5 0.00012 24.6 2.4 24 148-180 8-31 (45)
249 2lv2_A Insulinoma-associated p 68.2 2.9 0.0001 30.4 2.4 25 147-180 25-49 (85)
250 2yso_A ZFP-95, zinc finger pro 68.0 3.7 0.00013 24.4 2.5 25 147-180 9-33 (46)
251 2m0e_A Zinc finger and BTB dom 68.0 2.9 9.8E-05 21.7 1.8 17 164-180 7-23 (29)
252 2gqj_A Zinc finger protein KIA 67.9 2.2 7.4E-05 30.1 1.6 27 148-183 52-78 (98)
253 2d9h_A Zinc finger protein 692 67.9 2.9 9.8E-05 27.6 2.1 24 148-180 5-28 (78)
254 2kfq_A FP1; protein, de novo p 67.8 0.33 1.1E-05 27.6 -2.3 18 163-180 6-23 (32)
255 2kmk_A Zinc finger protein GFI 66.9 3.1 0.00011 27.0 2.1 25 147-180 54-78 (82)
256 1weo_A Cellulose synthase, cat 65.5 2 7E-05 34.2 1.1 44 86-142 26-71 (93)
257 2ctd_A Zinc finger protein 512 65.5 3.8 0.00013 29.5 2.5 45 130-183 35-86 (96)
258 2dmi_A Teashirt homolog 3; zin 65.1 3.8 0.00013 28.8 2.4 26 147-181 16-41 (115)
259 2wbs_A Krueppel-like factor 4; 65.0 3.8 0.00013 27.2 2.3 27 147-180 32-58 (89)
260 2jp9_A Wilms tumor 1; DNA bind 64.5 4.1 0.00014 28.3 2.5 44 130-180 67-117 (119)
261 2gli_A Protein (five-finger GL 64.3 2.6 8.8E-05 30.9 1.4 30 147-183 94-123 (155)
262 1ubd_C Protein (YY1 zinc finge 64.1 4 0.00014 28.8 2.4 27 147-180 59-85 (124)
263 1ubd_C Protein (YY1 zinc finge 63.7 4.2 0.00014 28.7 2.4 18 163-180 11-28 (124)
264 2bay_A PRE-mRNA splicing facto 62.8 0.85 2.9E-05 31.8 -1.4 45 95-140 3-49 (61)
265 2rpc_A Zinc finger protein ZIC 62.5 3 0.0001 30.7 1.5 44 130-180 91-143 (155)
266 1a1h_A QGSR zinc finger peptid 62.4 4.3 0.00015 26.9 2.2 41 131-180 36-83 (90)
267 1x6h_A Transcriptional repress 62.2 4.4 0.00015 26.6 2.2 16 165-180 53-68 (86)
268 1wjp_A Zinc finger protein 295 62.2 4.3 0.00015 28.3 2.2 71 96-183 17-93 (107)
269 1x6h_A Transcriptional repress 62.2 4.6 0.00016 26.5 2.3 25 147-180 12-36 (86)
270 2dmd_A Zinc finger protein 64, 61.9 6.3 0.00022 26.5 3.0 71 96-181 9-86 (96)
271 2emz_A ZFP-95, zinc finger pro 61.7 5.6 0.00019 23.7 2.4 24 148-180 10-33 (46)
272 2kmk_A Zinc finger protein GFI 61.2 4.6 0.00016 26.2 2.1 17 164-180 34-50 (82)
273 2yt9_A Zinc finger-containing 61.1 4.4 0.00015 27.3 2.1 17 164-180 40-56 (95)
274 2ebt_A Krueppel-like factor 5; 60.8 5.1 0.00017 27.1 2.3 27 147-180 42-68 (100)
275 2eod_A TNF receptor-associated 60.8 5 0.00017 26.0 2.2 26 147-180 33-58 (66)
276 1f62_A Transcription factor WS 60.0 7.1 0.00024 25.8 2.9 35 94-138 14-50 (51)
277 3mjh_B Early endosome antigen 59.8 5.7 0.00019 26.2 2.3 25 151-184 6-30 (34)
278 3asl_A E3 ubiquitin-protein li 59.6 6.8 0.00023 28.2 2.9 35 93-137 31-68 (70)
279 1fv5_A First zinc finger of U- 59.2 4.7 0.00016 25.4 1.8 24 148-180 6-29 (36)
280 1wjp_A Zinc finger protein 295 58.9 3.1 0.00011 29.1 1.0 20 164-183 47-66 (107)
281 1llm_C Chimera of ZIF23-GCN4; 58.5 5.5 0.00019 26.9 2.2 16 165-180 37-52 (88)
282 2ee8_A Protein ODD-skipped-rel 58.1 5.5 0.00019 27.4 2.2 71 95-180 17-94 (106)
283 2lce_A B-cell lymphoma 6 prote 57.6 7 0.00024 25.5 2.5 25 147-180 14-38 (74)
284 2cot_A Zinc finger protein 435 57.3 9.2 0.00032 25.1 3.1 24 148-180 16-39 (77)
285 2csh_A Zinc finger protein 297 57.2 3.9 0.00013 28.5 1.3 45 130-183 38-89 (110)
286 2yql_A PHD finger protein 21A; 57.1 3.7 0.00013 28.0 1.1 37 96-136 10-54 (56)
287 2e6s_A E3 ubiquitin-protein li 55.3 9.5 0.00032 28.1 3.2 36 92-137 38-76 (77)
288 2ctd_A Zinc finger protein 512 54.6 3.9 0.00013 29.4 1.0 24 148-180 32-56 (96)
289 1tf6_A Protein (transcription 53.6 7.9 0.00027 29.5 2.6 30 147-183 69-98 (190)
290 1llm_C Chimera of ZIF23-GCN4; 53.2 6.6 0.00023 26.5 1.9 36 148-183 29-82 (88)
291 2cor_A Pinch protein; LIM doma 52.9 7.7 0.00026 27.3 2.3 29 94-124 14-46 (79)
292 2kwj_A Zinc finger protein DPF 50.5 2.6 9E-05 32.4 -0.5 41 91-141 69-111 (114)
293 2egq_A FHL1 protein; LIM domai 50.4 11 0.00036 25.8 2.6 41 117-158 4-54 (77)
294 2ej4_A Zinc finger protein ZIC 50.3 10 0.00034 25.6 2.4 22 162-183 28-49 (95)
295 1tf6_A Protein (transcription 49.4 6.6 0.00022 30.0 1.5 26 148-180 10-35 (190)
296 2csh_A Zinc finger protein 297 48.8 8.7 0.0003 26.7 2.0 25 147-180 34-58 (110)
297 2ee8_A Protein ODD-skipped-rel 47.7 17 0.00057 24.9 3.3 42 130-180 18-66 (106)
298 2wbt_A B-129; zinc finger; 2.7 47.1 7.1 0.00024 28.0 1.3 27 148-183 98-124 (129)
299 1x68_A FHL5 protein; four-and- 46.9 23 0.00079 24.3 3.9 30 95-124 5-40 (76)
300 2ej4_A Zinc finger protein ZIC 46.4 14 0.00049 24.8 2.7 18 163-180 66-83 (95)
301 2cup_A Skeletal muscle LIM-pro 46.3 11 0.00036 27.0 2.1 41 96-140 34-77 (101)
302 2lt7_A Transcriptional regulat 46.2 9.2 0.00031 29.2 1.9 79 85-183 17-102 (133)
303 2puy_A PHD finger protein 21A; 46.0 1.8 6.1E-05 29.9 -2.0 26 115-140 27-54 (60)
304 2wbt_A B-129; zinc finger; 2.7 45.9 11 0.00036 27.1 2.1 25 147-180 71-95 (129)
305 2i13_A AART; DNA binding, zinc 45.8 11 0.00036 28.8 2.2 17 164-180 166-182 (190)
306 3shb_A E3 ubiquitin-protein li 45.7 12 0.00042 27.7 2.4 35 93-137 39-76 (77)
307 2e6r_A Jumonji/ARID domain-con 45.1 6.8 0.00023 29.5 1.0 34 95-138 31-66 (92)
308 2jrp_A Putative cytoplasmic pr 44.4 4.1 0.00014 31.4 -0.4 12 129-140 51-62 (81)
309 1x63_A Skeletal muscle LIM-pro 42.9 12 0.00041 25.8 1.9 41 117-158 4-51 (82)
310 3to7_A Histone acetyltransfera 42.8 16 0.00054 33.6 3.2 30 146-184 32-61 (276)
311 1x3h_A Leupaxin; paxillin fami 42.1 12 0.00042 25.7 1.9 40 117-158 4-49 (80)
312 2dlq_A GLI-kruppel family memb 42.1 15 0.00052 25.4 2.4 16 165-180 13-28 (124)
313 1zr9_A Zinc finger protein 593 42.0 5.7 0.00019 32.3 0.2 28 147-183 47-75 (124)
314 3ask_A E3 ubiquitin-protein li 41.9 13 0.00046 32.8 2.5 34 94-137 188-224 (226)
315 3f6q_B LIM and senescent cell 41.5 13 0.00045 24.5 1.9 30 95-124 11-44 (72)
316 2cuq_A Four and A half LIM dom 41.1 14 0.00049 25.3 2.1 39 117-157 4-48 (80)
317 2ou2_A Histone acetyltransfera 41.0 18 0.00062 33.2 3.3 30 146-184 30-59 (280)
318 2l4z_A DNA endonuclease RBBP8, 40.8 21 0.00073 27.4 3.2 30 95-124 61-93 (123)
319 2dmd_A Zinc finger protein 64, 40.4 19 0.00065 24.1 2.6 24 148-180 6-29 (96)
320 3i2d_A E3 SUMO-protein ligase 39.8 8.5 0.00029 36.3 1.0 56 93-154 247-307 (371)
321 4gne_A Histone-lysine N-methyl 38.9 24 0.00081 27.7 3.3 53 96-157 16-76 (107)
322 2dar_A PDZ and LIM domain prot 38.8 12 0.00042 26.5 1.5 28 95-124 25-56 (90)
323 2xzf_A Formamidopyrimidine-DNA 38.5 22 0.00077 31.0 3.4 29 128-157 241-269 (271)
324 1wev_A Riken cDNA 1110020M19; 38.2 4.2 0.00014 30.4 -1.1 40 94-143 32-77 (88)
325 1xwh_A Autoimmune regulator; P 38.0 8.6 0.00029 27.0 0.5 23 115-137 30-54 (66)
326 2ehe_A Four and A half LIM dom 38.0 19 0.00065 24.8 2.3 29 96-124 16-48 (82)
327 1zfo_A LAsp-1; LIM domain, zin 37.8 7.5 0.00026 24.0 0.2 22 130-151 4-26 (31)
328 1pft_A TFIIB, PFTFIIBN; N-term 37.7 50 0.0017 21.7 4.3 32 129-162 5-36 (50)
329 1k82_A Formamidopyrimidine-DNA 37.7 21 0.00073 31.2 3.1 28 128-156 239-266 (268)
330 4fo9_A E3 SUMO-protein ligase 37.7 9.8 0.00034 35.7 1.0 55 94-154 214-273 (360)
331 2d8x_A Protein pinch; LIM doma 37.3 12 0.00042 25.1 1.2 27 96-124 6-36 (70)
332 3o36_A Transcription intermedi 37.1 20 0.00068 29.0 2.7 25 115-139 26-52 (184)
333 1x6f_A Zinc finger protein 462 37.0 18 0.00061 26.0 2.1 25 147-180 22-46 (88)
334 3mpx_A FYVE, rhogef and PH dom 36.9 7.2 0.00025 34.5 0.0 30 95-124 375-407 (434)
335 1wii_A Hypothetical UPF0222 pr 36.3 17 0.00059 27.8 2.0 40 130-172 24-66 (85)
336 2lcq_A Putative toxin VAPC6; P 36.3 13 0.00045 29.5 1.4 16 129-144 148-163 (165)
337 1ee8_A MUTM (FPG) protein; bet 36.0 27 0.00092 30.6 3.5 29 128-157 234-262 (266)
338 2dlo_A Thyroid receptor-intera 36.0 19 0.00065 24.9 2.1 41 116-159 4-50 (81)
339 3u6p_A Formamidopyrimidine-DNA 36.0 24 0.00081 31.1 3.1 28 128-156 244-271 (273)
340 2pq8_A Probable histone acetyl 36.0 25 0.00086 32.2 3.4 29 147-184 33-61 (278)
341 2ku3_A Bromodomain-containing 35.9 13 0.00045 27.0 1.2 34 94-137 32-65 (71)
342 2ozu_A Histone acetyltransfera 35.8 22 0.00077 32.7 3.0 29 147-184 38-66 (284)
343 1zbd_B Rabphilin-3A; G protein 35.3 6.9 0.00023 31.7 -0.4 49 95-155 55-103 (134)
344 2e72_A POGO transposable eleme 34.7 19 0.00065 25.8 1.9 27 157-183 10-36 (49)
345 2ghf_A ZHX1, zinc fingers and 34.1 21 0.00073 26.6 2.2 23 148-179 48-70 (102)
346 3h0g_I DNA-directed RNA polyme 33.9 28 0.00094 27.0 2.9 37 128-164 3-40 (113)
347 2ysm_A Myeloid/lymphoid or mix 33.8 18 0.00063 27.1 1.8 37 91-137 65-103 (111)
348 2fc7_A ZZZ3 protein; structure 33.5 33 0.0011 25.6 3.2 29 97-125 23-57 (82)
349 1qyp_A RNA polymerase II; tran 33.0 40 0.0014 22.9 3.3 32 130-161 16-54 (57)
350 1rut_X Flinc4, fusion protein 32.9 10 0.00035 30.6 0.3 61 96-159 33-106 (188)
351 3u5n_A E3 ubiquitin-protein li 32.8 36 0.0012 28.1 3.6 40 96-139 8-55 (207)
352 2ghf_A ZHX1, zinc fingers and 32.6 21 0.00072 26.6 2.0 25 147-180 15-39 (102)
353 2kpi_A Uncharacterized protein 32.5 28 0.00097 24.4 2.5 29 129-169 10-38 (56)
354 2jmo_A Parkin; IBR, E3 ligase, 32.4 15 0.0005 26.8 1.0 32 95-126 25-68 (80)
355 2gqj_A Zinc finger protein KIA 32.1 26 0.0009 24.4 2.3 25 147-180 21-46 (98)
356 1zw8_A Zinc-responsive transcr 32.0 25 0.00086 24.2 2.2 28 149-183 37-64 (64)
357 1twf_I B12.6, DNA-directed RNA 32.0 34 0.0012 26.8 3.2 36 128-163 3-39 (122)
358 2i13_A AART; DNA binding, zinc 31.7 24 0.00082 26.8 2.2 17 164-180 138-154 (190)
359 1x61_A Thyroid receptor intera 31.7 27 0.00093 23.4 2.2 30 95-124 5-38 (72)
360 1wd2_A Ariadne-1 protein homol 31.5 22 0.00077 25.0 1.8 38 95-140 6-45 (60)
361 2co8_A NEDD9 interacting prote 31.4 17 0.00058 25.6 1.2 30 95-124 15-47 (82)
362 1nyp_A Pinch protein; LIM doma 31.4 13 0.00045 24.7 0.6 28 95-124 5-36 (66)
363 3avr_A Lysine-specific demethy 31.0 15 0.00053 36.0 1.2 29 94-124 457-493 (531)
364 1wig_A KIAA1808 protein; LIM d 30.0 21 0.00073 24.6 1.5 28 95-124 5-36 (73)
365 2lri_C Autoimmune regulator; Z 29.9 30 0.001 24.7 2.3 34 95-138 24-59 (66)
366 1x4k_A Skeletal muscle LIM-pro 29.5 17 0.0006 24.3 1.0 29 96-124 6-38 (72)
367 2ct0_A Non-SMC element 1 homol 29.1 24 0.00082 25.8 1.7 46 95-140 15-63 (74)
368 1fp0_A KAP-1 corepressor; PHD 28.5 30 0.001 26.5 2.2 23 115-137 47-71 (88)
369 1x64_A Alpha-actinin-2 associa 28.5 21 0.00071 25.3 1.3 29 94-124 24-56 (89)
370 2jun_A Midline-1; B-BOX, TRIM, 28.2 13 0.00043 26.9 0.1 30 96-125 4-35 (101)
371 2xb1_A Pygopus homolog 2, B-ce 28.2 5.6 0.00019 30.6 -1.9 33 94-126 2-38 (105)
372 1m3v_A FLIN4, fusion of the LI 28.0 77 0.0026 23.7 4.4 45 97-143 34-83 (122)
373 1joc_A EEA1, early endosomal a 27.8 7.2 0.00024 30.8 -1.4 31 95-125 69-102 (125)
374 2cur_A Skeletal muscle LIM-pro 27.7 19 0.00064 24.1 0.9 27 96-124 6-36 (69)
375 2xjy_A Rhombotin-2; oncoprotei 27.7 14 0.00048 27.6 0.2 43 96-141 30-78 (131)
376 2xqn_T Testin, TESS; metal-bin 25.6 32 0.0011 25.5 1.9 44 96-140 31-74 (126)
377 2i50_A Ubiquitin carboxyl-term 25.0 76 0.0026 25.2 4.1 56 111-170 4-70 (126)
378 2ro1_A Transcription intermedi 24.8 41 0.0014 27.9 2.5 24 115-138 24-49 (189)
379 2k16_A Transcription initiatio 24.3 13 0.00046 26.2 -0.4 44 96-141 19-71 (75)
380 1x62_A C-terminal LIM domain p 24.3 21 0.00072 24.7 0.6 29 94-124 14-46 (79)
381 2yt5_A Metal-response element- 24.1 25 0.00085 24.1 1.0 35 94-138 22-61 (66)
382 3v43_A Histone acetyltransfera 23.4 68 0.0023 24.3 3.4 33 95-137 77-111 (112)
383 3t7l_A Zinc finger FYVE domain 23.0 4.1 0.00014 30.5 -3.5 31 95-125 20-53 (90)
384 1v6g_A Actin binding LIM prote 21.8 44 0.0015 23.0 1.9 23 117-140 4-26 (81)
385 2g45_A Ubiquitin carboxyl-term 21.7 1.3E+02 0.0044 24.1 4.8 44 113-169 14-61 (129)
386 1x6a_A LIMK-2, LIM domain kina 21.3 35 0.0012 23.4 1.3 23 117-140 4-26 (81)
387 2l5u_A Chromodomain-helicase-D 21.3 44 0.0015 23.1 1.8 23 115-137 33-57 (61)
388 3w0f_A Endonuclease 8-like 3; 21.3 46 0.0016 30.1 2.4 26 131-156 253-279 (287)
389 3cc2_Z 50S ribosomal protein L 21.2 45 0.0015 27.2 2.1 26 129-157 60-85 (116)
390 1mty_D Methane monooxygenase h 20.8 24 0.00081 34.3 0.4 26 141-174 423-448 (512)
391 4esj_A Type-2 restriction enzy 20.6 34 0.0012 31.3 1.4 30 96-125 35-65 (257)
392 1k3x_A Endonuclease VIII; hydr 20.4 45 0.0015 29.0 2.0 28 128-156 233-260 (262)
393 1g47_A Pinch protein; LIM doma 20.4 26 0.0009 23.7 0.4 30 95-124 11-44 (77)
394 3twl_A Formamidopyrimidine-DNA 20.3 38 0.0013 30.4 1.6 31 128-159 246-278 (310)
395 2l43_A N-teminal domain from h 20.1 31 0.0011 25.7 0.9 33 95-137 42-74 (88)
No 1
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=100.00 E-value=5.3e-46 Score=297.11 Aligned_cols=95 Identities=47% Similarity=0.927 Sum_probs=87.9
Q ss_pred ceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceeeeeEecCCcEEEcccCCccccCccccccccCh
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTRVEPTGLGTVFMCTHGGARHSTAGCKRTYLSQ 172 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~rIEq~~lgsVFMCt~gg~r~~v~gCkRTYLSQ 172 (282)
+||||+|++||+||||||||||||||+||.+ ++++++|++|+++|+|||++.+|+||||++ ++|||||||||
T Consensus 1 ~hfC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe~~~~~~if~C~~------~~~CkrtyLs~ 74 (101)
T 3vk6_A 1 VHFCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSI------VQGCKRTYLSQ 74 (101)
T ss_dssp CCBCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEEEEEGGGCCCCCC------CCCCCCCCSSH
T ss_pred CeecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeEEeccCCEEECCC------CCCHHHHhcCH
Confidence 5999999999999999999999999999987 468999999999999999999999999998 99999999999
Q ss_pred HhHHHHhhccCCCCCcccccccchhhhh
Q psy6453 173 RDLMALGRHLGPHPRLHRKDHRLFRALV 200 (282)
Q Consensus 173 RDLQAHInH~h~~p~~~~~~~~~~~a~~ 200 (282)
|||||||||+| +++++.+++++.
T Consensus 75 rdlqaHI~~~H-----~~~~~~~~~~~~ 97 (101)
T 3vk6_A 75 RDLQAHINHRH-----MRAGKPVTRASL 97 (101)
T ss_dssp HHHHHHHHHHT-----TTSCCCCCSCC-
T ss_pred HHHHHHHHHHh-----hhcCCCCCCccc
Confidence 99999999999 788777664443
No 2
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=97.63 E-value=6.9e-06 Score=56.03 Aligned_cols=50 Identities=34% Similarity=0.681 Sum_probs=39.2
Q ss_pred eecccCCCceEEEEeecccccccccccccC-CCCCCccCCCccceeeeeEe
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTRVEPT 145 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~rIEq~ 145 (282)
..|.+|--.+..-.+..||.|+||++|... .+....||.|...+..+...
T Consensus 6 ~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 56 (68)
T 1chc_A 6 ERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESVVHT 56 (68)
T ss_dssp CCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCEECC
T ss_pred CCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhhhhc
Confidence 569999888766558899999999999965 12347899999998866443
No 3
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.57 E-value=4.6e-06 Score=63.45 Aligned_cols=81 Identities=21% Similarity=0.340 Sum_probs=60.4
Q ss_pred ceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceeeee--------EecCCcEEEcccCCccccCcc
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTRVE--------PTGLGTVFMCTHGGARHSTAG 164 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~rIE--------q~~lgsVFMCt~gg~r~~v~g 164 (282)
...|.+|.-.+..- ...||.|+||..|... .++...||.|...+..-+ +.-.+-...|. +.|
T Consensus 18 ~~~C~IC~~~~~~p-~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~i~~l~v~C~-------n~g 89 (118)
T 3hct_A 18 KYECPICLMALREA-VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCP-------NEG 89 (118)
T ss_dssp GGBCTTTCSBCSSE-EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTSEEECS-------STT
T ss_pred CCCCCcCChhhcCe-EECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccCHHHHHHHccceeECC-------CCC
Confidence 36899998877654 4569999999999975 223348999999887532 12235667898 589
Q ss_pred ccccccChHhHHHHhhccCC
Q psy6453 165 CKRTYLSQRDLMALGRHLGP 184 (282)
Q Consensus 165 CkRTYLSQRDLQAHInH~h~ 184 (282)
|.... +..+|+.|.+-.+.
T Consensus 90 C~~~~-~~~~l~~H~~~c~~ 108 (118)
T 3hct_A 90 CLHKM-ELRHLEDHQAHCEF 108 (118)
T ss_dssp CCCEE-EGGGSGGGTSSSCC
T ss_pred CCCEE-eeHHHHHHHHHchh
Confidence 98775 58899999987774
No 4
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=97.43 E-value=4.7e-06 Score=66.66 Aligned_cols=92 Identities=16% Similarity=0.338 Sum_probs=61.8
Q ss_pred ceeeeecccccCCcceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceee-----------------
Q psy6453 81 HTVHLIGEKVLNPIIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTR----------------- 141 (282)
Q Consensus 81 ~kVnLIGEK~~np~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~r----------------- 141 (282)
+...+++++..+ ...|.+|.-.+.-= ...+|.|.||..|... ..+...||.|...+..
T Consensus 19 ~~~~~~~~~l~~--~~~C~IC~~~~~~p-v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~~~~~~d~~ 95 (141)
T 3knv_A 19 FSKTLLGTKLEA--KYLCSACRNVLRRP-FQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSAFPDNA 95 (141)
T ss_dssp BCGGGTGGGCCG--GGBCTTTCSBCSSE-EECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCCCTTTTEECGGGCEECHH
T ss_pred cchhhhhccCCc--CcCCCCCChhhcCc-EECCCCCccCHHHHHHHHhcCCCCCCCCCCcccccccccccchhhhcccHH
Confidence 344455555444 37899998766543 4469999999999876 3344589999886421
Q ss_pred eeEecCCcEEEcccCCccccCccccccccChHhHHH-HhhccC
Q psy6453 142 VEPTGLGTVFMCTHGGARHSTAGCKRTYLSQRDLMA-LGRHLG 183 (282)
Q Consensus 142 IEq~~lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQA-HInH~h 183 (282)
+++.-..-...|. +.||+.+- .-.+|++ |.++.+
T Consensus 96 ~~~~i~~L~v~Cp-------n~GC~~~~-~l~~l~~~H~~~~~ 130 (141)
T 3knv_A 96 ARREVESLPAVCP-------SDGCTWKG-TLKEYESCHEGRCP 130 (141)
T ss_dssp HHHHHHTSEEECC-------STTCCCEE-EHHHHHHHTTTCCH
T ss_pred HHHHHcccccccC-------CCCCCCEe-EHHHHHHHHHHHhH
Confidence 1222235566898 48998764 4788998 987554
No 5
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.43 E-value=1.2e-05 Score=55.76 Aligned_cols=51 Identities=20% Similarity=0.406 Sum_probs=38.4
Q ss_pred eecccCCCceE--EEEeecccccccccccccC-CCCCCccCCCccceeeeeEec
Q psy6453 96 HTCEKCEKPIM--IYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTRVEPTG 146 (282)
Q Consensus 96 HFCdkCdlPI~--IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~rIEq~~ 146 (282)
..|.+|--.+. ...+..||.|+||.+|... -+....||.|...|..+.+..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 69 (74)
T 2ep4_A 16 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLS 69 (74)
T ss_dssp CBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCCSCC
T ss_pred CCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccccccccC
Confidence 57999987754 3344569999999999975 123468999999998776654
No 6
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.41 E-value=4.5e-05 Score=53.35 Aligned_cols=47 Identities=26% Similarity=0.528 Sum_probs=35.5
Q ss_pred ceecccCCCceE--EEEeecccccccccccccC-CCCCCccCCCccceee
Q psy6453 95 IHTCEKCEKPIM--IYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 95 iHFCdkCdlPI~--IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~r 141 (282)
...|.+|--.+. .-.+..||.|+||..|... -+....||.|...+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred CCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCC
Confidence 467999976654 3345679999999999975 2345789999998864
No 7
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.36 E-value=7.6e-05 Score=51.82 Aligned_cols=46 Identities=24% Similarity=0.698 Sum_probs=35.6
Q ss_pred ceecccCCCceEEEEeecccccccccccccC-CCCCCccCCCccceee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~r 141 (282)
...|.+|--.+.. ...+||.|+||+.|... .+....||.|...|..
T Consensus 15 ~~~C~IC~~~~~~-~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 15 VPECAICLQTCVH-PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp CCBCSSSSSBCSS-EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCccCCcccCC-CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCH
Confidence 3679999776644 35669999999999875 2345789999998863
No 8
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.34 E-value=1.8e-05 Score=54.39 Aligned_cols=48 Identities=23% Similarity=0.527 Sum_probs=39.2
Q ss_pred ceecccCCCceEEEEeecccccccccccccC-CCCCCccCCCccceeeeeE
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTRVEP 144 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~rIEq 144 (282)
...|.+|--.+.. +..||.|+||..|... .+....||.|...+...+.
T Consensus 15 ~~~C~IC~~~~~~--~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 63 (70)
T 2ecn_A 15 EEECCICMDGRAD--LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANE 63 (70)
T ss_dssp CCCCSSSCCSCCS--EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCC
T ss_pred CCCCeeCCcCccC--cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCc
Confidence 4689999888777 8899999999999975 2357889999998875543
No 9
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.21 E-value=5.5e-05 Score=53.61 Aligned_cols=45 Identities=31% Similarity=0.673 Sum_probs=35.2
Q ss_pred ceecccCCCceEEEEeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
...|.+|--.+.- -.+.||.|+||..|... .+....||.|...+.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 15 PFRCFICRQAFQN-PVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CSBCSSSCSBCCS-EEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCcCCCchhcC-eeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 4789999877654 34689999999999965 123568999998876
No 10
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=97.21 E-value=9.4e-05 Score=51.61 Aligned_cols=51 Identities=24% Similarity=0.447 Sum_probs=35.5
Q ss_pred ceecccCCC-ceEEEEeecccccc-cccccccC-CCCCCccCCCccceeeeeEe
Q psy6453 95 IHTCEKCEK-PIMIYGRMIPCRHV-FCLSCAQA-PRSPPTCLRCGEGVTRVEPT 145 (282)
Q Consensus 95 iHFCdkCdl-PI~IYGRmIPCKHV-FCy~CA~l-~k~~k~CprC~d~V~rIEq~ 145 (282)
...|.+|-- +...---..||.|+ ||++|+.. .+..+.||.|...|..+-+.
T Consensus 7 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i 60 (63)
T 2vje_B 7 LKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKV 60 (63)
T ss_dssp GSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEEEE
T ss_pred CCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceEEE
Confidence 356888843 33221112399998 99999986 23446899999999877654
No 11
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.19 E-value=0.0001 Score=50.64 Aligned_cols=45 Identities=27% Similarity=0.501 Sum_probs=34.9
Q ss_pred ceecccCCCceEEEEeecccccccccccccC--C--CCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--P--RSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~--k~~k~CprC~d~V~ 140 (282)
...|.+|--.+.- ..++||.|+||.+|... . .....||.|...+.
T Consensus 20 ~~~C~IC~~~~~~-~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 20 EVICPICLDILQK-PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCBCTTTCSBCSS-EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCC
T ss_pred CCEeccCCcccCC-eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCC
Confidence 3689999887664 44559999999999875 2 24568999999876
No 12
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=97.16 E-value=5.1e-05 Score=51.96 Aligned_cols=47 Identities=21% Similarity=0.462 Sum_probs=34.9
Q ss_pred ceecccCCCceE--EEEeecccccccccccccC-CCCCCccCCCccceee
Q psy6453 95 IHTCEKCEKPIM--IYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 95 iHFCdkCdlPI~--IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~r 141 (282)
..-|.+|--.+. ...+..||.|+||.+|... -+....||.|...|..
T Consensus 14 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 14 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp CCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred CCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 467999966553 2346789999999999975 1234679999988763
No 13
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.15 E-value=0.00016 Score=48.99 Aligned_cols=42 Identities=26% Similarity=0.705 Sum_probs=34.6
Q ss_pred eecccCCCceEEEEeecccccccccccccCCCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~ 140 (282)
..|.+|.-.+.. -+++||.|.||..|... ....||.|...+.
T Consensus 7 ~~C~IC~~~~~~-p~~l~CgH~fC~~Ci~~--~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 7 LRCQQCQAEAKC-PKLLPCLHTLCSGCLEA--SGMQCPICQAPWP 48 (56)
T ss_dssp SSCSSSCSSCBC-CSCSTTSCCSBTTTCSS--SSSSCSSCCSSSS
T ss_pred CCceEeCCccCC-eEEcCCCCcccHHHHcc--CCCCCCcCCcEee
Confidence 679999776654 57899999999999884 4678999998875
No 14
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=97.15 E-value=0.00011 Score=57.40 Aligned_cols=45 Identities=20% Similarity=0.559 Sum_probs=35.7
Q ss_pred eecccCCCceEEEEeecccccccccccccC-CCCCCccCCCccceee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~r 141 (282)
..|.+|--.+. -..++||.|.||.+|... -+....||.|...|..
T Consensus 54 ~~C~iC~~~~~-~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 54 LQCIICSEYFI-EAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp SBCTTTCSBCS-SEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred CCCcccCcccC-CceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 46999987664 467889999999999875 2356789999988753
No 15
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.14 E-value=3.6e-05 Score=57.08 Aligned_cols=66 Identities=21% Similarity=0.384 Sum_probs=48.6
Q ss_pred eecccCCCceEEE------EeecccccccccccccC-CCCCCccCCCccceee--eeEec-CCcEEEcccCCcccc
Q psy6453 96 HTCEKCEKPIMIY------GRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTR--VEPTG-LGTVFMCTHGGARHS 161 (282)
Q Consensus 96 HFCdkCdlPI~IY------GRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~r--IEq~~-lgsVFMCt~gg~r~~ 161 (282)
..|.+|--.+.-- .+..||.|+||.+|... -+....||.|...+.. +.... .++.+.|++|...+.
T Consensus 8 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 8 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGYS 83 (133)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBHH
T ss_pred CCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccccccccccCCCCCCCCCCCCccc
Confidence 6799998776432 26789999999999976 2356799999998874 33333 577888988665543
No 16
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.14 E-value=8.9e-05 Score=58.97 Aligned_cols=47 Identities=19% Similarity=0.424 Sum_probs=37.3
Q ss_pred ceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~r 141 (282)
...|.+|--.+.--..+.||.|+||..|... ..+...||.|...+..
T Consensus 54 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 54 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 4689999887776555569999999999975 3346789999998853
No 17
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=97.10 E-value=5.1e-05 Score=49.57 Aligned_cols=45 Identities=20% Similarity=0.541 Sum_probs=34.0
Q ss_pred eecccCCCceEE---EEeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMI---YGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~I---YGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+.- ..++.||.|+||.+|... .+....||.|...|.
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 568889777633 357789999999999975 123378999998764
No 18
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.10 E-value=0.00011 Score=50.29 Aligned_cols=45 Identities=36% Similarity=0.772 Sum_probs=35.3
Q ss_pred ceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~ 140 (282)
...|.+|.-.+.- ..++||.|+||..|... .+....||.|...+.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 15 KYKCEKCHLVLCS-PKQTECGHRFCESCMAALLSSSSPKCTACQESIV 61 (66)
T ss_dssp CEECTTTCCEESS-CCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCC
T ss_pred CCCCCCCChHhcC-eeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCC
Confidence 3789999876643 34479999999999986 345678999998876
No 19
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.09 E-value=4.2e-05 Score=53.25 Aligned_cols=47 Identities=23% Similarity=0.516 Sum_probs=36.0
Q ss_pred ceecccCCCceEEEEeecccccccccccccCC-CCCCccCCCccceee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQAP-RSPPTCLRCGEGVTR 141 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~-k~~k~CprC~d~V~r 141 (282)
...|.+|--.+.--..+.||.|+||..|...- +....||.|...|..
T Consensus 15 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 15 YILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQ 62 (72)
T ss_dssp GGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCS
T ss_pred CCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCc
Confidence 46799998776654445599999999998651 235789999998874
No 20
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.07 E-value=9.9e-05 Score=52.36 Aligned_cols=44 Identities=27% Similarity=0.590 Sum_probs=34.2
Q ss_pred eecccCCCceEEEEeecccccc-cccccccCCCCCCccCCCccceeeee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHV-FCLSCAQAPRSPPTCLRCGEGVTRVE 143 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHV-FCy~CA~l~k~~k~CprC~d~V~rIE 143 (282)
.-|.+|--.. .--.++||.|+ ||..|+. ....||.|...|..+.
T Consensus 26 ~~C~IC~~~~-~~~~~~pCgH~~~C~~C~~---~~~~CP~Cr~~i~~~~ 70 (75)
T 2ecg_A 26 KLCKICMDRN-IAIVFVPCGHLVTCKQCAE---AVDKCPMCYTVITFKQ 70 (75)
T ss_dssp HSCSSSCSSC-CCBCCSSSCCCCBCHHHHH---HCSBCTTTCCBCCCCC
T ss_pred CCCCcCCCCC-CCEEEecCCCHHHHHHHhh---CCCCCccCCceecCcE
Confidence 4688885443 33456899999 9999997 4589999999998643
No 21
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.06 E-value=8.4e-05 Score=51.96 Aligned_cols=45 Identities=24% Similarity=0.533 Sum_probs=34.3
Q ss_pred eecccCCCceEE--EEeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMI--YGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~I--YGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+.. -.+..||.|+||.+|... -+....||.|...+.
T Consensus 24 ~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 24 TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp CEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 679999865543 247789999999999875 123568999998775
No 22
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.06 E-value=0.00019 Score=53.85 Aligned_cols=45 Identities=24% Similarity=0.648 Sum_probs=33.6
Q ss_pred eecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~r 141 (282)
..|.+|--.+.- -..+||.|.||..|... .++...||.|...+..
T Consensus 16 ~~C~iC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 16 CQCGICMEILVE-PVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HBCTTTCSBCSS-CEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCccCCcccCc-eeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 679999765543 34459999999999876 3345679999888763
No 23
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=97.06 E-value=0.00029 Score=51.30 Aligned_cols=47 Identities=30% Similarity=0.588 Sum_probs=35.9
Q ss_pred eecccCCCceEEEEeecccccc-cccccccCCCCCCccCCCccceeeeeEec
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHV-FCLSCAQAPRSPPTCLRCGEGVTRVEPTG 146 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHV-FCy~CA~l~k~~k~CprC~d~V~rIEq~~ 146 (282)
.-|.+|--.. .-..++||.|+ ||.+|+. ..+.||.|...|..+-+..
T Consensus 19 ~~C~IC~~~~-~~~v~~pCgH~~~C~~C~~---~~~~CP~Cr~~i~~~~~i~ 66 (79)
T 2yho_A 19 MLCMVCCEEE-INSTFCPCGHTVCCESCAA---QLQSCPVCRSRVEHVQHVY 66 (79)
T ss_dssp TBCTTTSSSB-CCEEEETTCBCCBCHHHHT---TCSBCTTTCCBCCEEEECB
T ss_pred CEeEEeCccc-CcEEEECCCCHHHHHHHHH---hcCcCCCCCchhhCeEEEE
Confidence 4588884433 23467899999 9999998 3469999999999876544
No 24
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=97.05 E-value=0.00012 Score=53.52 Aligned_cols=45 Identities=24% Similarity=0.463 Sum_probs=34.8
Q ss_pred eecccCCCceEEEEeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+.--..+.||.|.||..|... -+....||.|...+.
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 23 LRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVT 68 (99)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCC
Confidence 679999887766444459999999999865 224568999998876
No 25
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.04 E-value=0.00013 Score=54.40 Aligned_cols=47 Identities=23% Similarity=0.505 Sum_probs=36.5
Q ss_pred ceecccCCCceEEEEeecccccccccccccC-CCCCCccCCCccceee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~r 141 (282)
...|.+|.-.+.--..+.||.|.||..|... -+....||.|...+..
T Consensus 15 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 15 HLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred cCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 3689999887766555569999999999875 2234789999988763
No 26
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.04 E-value=0.00015 Score=51.02 Aligned_cols=46 Identities=17% Similarity=0.514 Sum_probs=34.6
Q ss_pred ceecccCCCceEE---EEeecccccccccccccC--C--CCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMI---YGRMIPCRHVFCLSCAQA--P--RSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~I---YGRmIPCKHVFCy~CA~l--~--k~~k~CprC~d~V~ 140 (282)
...|.+|--.+.. .-++.||.|+||.+|... . .....||.|...+.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred CCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 3679999887664 245679999999999875 1 12467999988764
No 27
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=97.01 E-value=0.00016 Score=50.15 Aligned_cols=45 Identities=22% Similarity=0.551 Sum_probs=33.7
Q ss_pred ceecccCCCceEEEEeecccccccccccccC--CC------CCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PR------SPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k------~~k~CprC~d~V~ 140 (282)
...|.+|--.+.- -+++||.|+||.+|... .. ....||.|...+.
T Consensus 12 ~~~C~IC~~~~~~-p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 12 EVTCPICLELLTE-PLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCEETTTTEECSS-CCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred CCCCcCCCcccCC-eeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 3679999765543 45679999999999985 21 2567999998876
No 28
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=96.99 E-value=0.0002 Score=50.09 Aligned_cols=48 Identities=21% Similarity=0.560 Sum_probs=34.9
Q ss_pred eecccCC-CceEEEEeec--ccccc-cccccccC-CCCCCccCCCccceeeeeEe
Q psy6453 96 HTCEKCE-KPIMIYGRMI--PCRHV-FCLSCAQA-PRSPPTCLRCGEGVTRVEPT 145 (282)
Q Consensus 96 HFCdkCd-lPI~IYGRmI--PCKHV-FCy~CA~l-~k~~k~CprC~d~V~rIEq~ 145 (282)
..|.+|- .+... .++ ||.|+ ||++|+.. .+..+.||.|...|..+-+.
T Consensus 9 ~~C~IC~~~~~~~--~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i 61 (64)
T 2vje_A 9 EPCVICQGRPKNG--CIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLT 61 (64)
T ss_dssp SCCTTTSSSCSCE--EEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEEEE
T ss_pred CCCCcCCCCCCCE--EEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceEee
Confidence 4688884 33333 344 99999 89999986 33456799999999877554
No 29
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.98 E-value=3.2e-05 Score=52.12 Aligned_cols=46 Identities=24% Similarity=0.552 Sum_probs=34.9
Q ss_pred ceecccCCCceEEE------EeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIY------GRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IY------GRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
...|.+|--.+..- ..+.||.|+||.+|... .+....||.|...|.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 36799998776432 26789999999999975 123578999998875
No 30
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=96.97 E-value=0.00011 Score=58.56 Aligned_cols=80 Identities=21% Similarity=0.358 Sum_probs=57.4
Q ss_pred ceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceeee--------eEecCCcEEEcccCCccccCcc
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTRV--------EPTGLGTVFMCTHGGARHSTAG 164 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~rI--------Eq~~lgsVFMCt~gg~r~~v~g 164 (282)
...|.+|.-++..= ...||.|+||.+|... ..+...||.|...+..- ++.-.+-...|. +.|
T Consensus 18 ~~~C~IC~~~~~~p-v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~-------n~G 89 (170)
T 3hcs_A 18 KYECPICLMALREA-VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCP-------NEG 89 (170)
T ss_dssp GGBCTTTCSBCSSE-EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTSEEECC-------STT
T ss_pred CCCCCCCChhhcCc-EECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhhHHHHHHHhhcccCCC-------CCC
Confidence 47899998876654 4469999999999975 22345999999887652 222245677898 478
Q ss_pred ccccccChHhHHHHhhccC
Q psy6453 165 CKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 165 CkRTYLSQRDLQAHInH~h 183 (282)
|+.+. +..+|+.|.+.+-
T Consensus 90 C~~~~-~~~~l~~H~~~C~ 107 (170)
T 3hcs_A 90 CLHKM-ELRHLEDHQAHCE 107 (170)
T ss_dssp CCCEE-EGGGHHHHHTTCT
T ss_pred CCcee-cHhHHHHHHhcCC
Confidence 88754 5678888876554
No 31
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.95 E-value=0.00025 Score=50.55 Aligned_cols=47 Identities=23% Similarity=0.577 Sum_probs=36.6
Q ss_pred eecccCCCceEEEEeecccccc-cccccccCCCCCCccCCCccceeeeeEec
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHV-FCLSCAQAPRSPPTCLRCGEGVTRVEPTG 146 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHV-FCy~CA~l~k~~k~CprC~d~V~rIEq~~ 146 (282)
.-|.+|---. .-..++||.|+ ||.+|+. ..+.||.|...|..+-++.
T Consensus 16 ~~C~IC~~~~-~~~v~~pCgH~~~C~~C~~---~~~~CP~CR~~i~~~~~i~ 63 (68)
T 2ea5_A 16 KDCVVCQNGT-VNWVLLPCRHTCLCDGCVK---YFQQCPMCRQFVQESFALS 63 (68)
T ss_dssp SCCSSSSSSC-CCCEETTTTBCCSCTTHHH---HCSSCTTTCCCCCCEECCC
T ss_pred CCCCCcCcCC-CCEEEECCCChhhhHHHHh---cCCCCCCCCcchhceEEee
Confidence 5688884322 23567899999 9999999 4589999999999876655
No 32
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=96.95 E-value=0.00013 Score=53.49 Aligned_cols=45 Identities=22% Similarity=0.474 Sum_probs=33.5
Q ss_pred eecccCCCceE--EEEeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIM--IYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~--IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+. --.+.+||.|+||..|... -+....||.|...+.
T Consensus 41 ~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 41 MCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 67999964432 2345689999999999876 235678999998764
No 33
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=96.91 E-value=3.9e-05 Score=52.30 Aligned_cols=45 Identities=24% Similarity=0.569 Sum_probs=35.2
Q ss_pred eecccCCCceEEE------EeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIY------GRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IY------GRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+..- .++.||.|+||.+|... -+....||.|...+.
T Consensus 11 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 11 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 62 (71)
T ss_dssp CBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCC
T ss_pred CCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccC
Confidence 6799998776432 26789999999999965 124578999999887
No 34
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=96.91 E-value=8.7e-05 Score=55.75 Aligned_cols=78 Identities=17% Similarity=0.319 Sum_probs=55.5
Q ss_pred eecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceeeeeEe---------cCCcEEEcccCCccccCcc
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTRVEPT---------GLGTVFMCTHGGARHSTAG 164 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~rIEq~---------~lgsVFMCt~gg~r~~v~g 164 (282)
..|.+|.-.+.- -...||.|+||..|... ..+...||.|...+..-+-. ...--..|.. .|
T Consensus 24 ~~C~IC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~l~~~i~~l~v~C~~-------~g 95 (116)
T 1rmd_A 24 ISCQICEHILAD-PVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNILNSLMVKCPA-------QD 95 (116)
T ss_dssp TBCTTTCSBCSS-EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHHHHCEEECCS-------TT
T ss_pred CCCCCCCcHhcC-cEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhccccHHHHHHHHHHhcCCCCC-------CC
Confidence 679999877654 34479999999999865 22356899999987642211 1234456883 69
Q ss_pred ccccccChHhHHHHhhcc
Q psy6453 165 CKRTYLSQRDLMALGRHL 182 (282)
Q Consensus 165 CkRTYLSQRDLQAHInH~ 182 (282)
|... ..-.+|+.|.+..
T Consensus 96 C~~~-~~~~~~~~H~~~C 112 (116)
T 1rmd_A 96 CNEE-VSLEKYNHHVSSH 112 (116)
T ss_dssp CCCE-EEHHHHHHHHHTS
T ss_pred Ccch-hhHhHHHHHHHHh
Confidence 9776 4688899998754
No 35
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=96.90 E-value=0.00015 Score=53.99 Aligned_cols=45 Identities=18% Similarity=0.470 Sum_probs=35.2
Q ss_pred eecccCCCceEEEEeecccccccccccccC--CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+.--..+.||.|.||+.|... ......||.|...+.
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 23 FRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCC
Confidence 679999888765444499999999999975 222368999998874
No 36
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=96.90 E-value=0.00027 Score=46.22 Aligned_cols=45 Identities=29% Similarity=0.552 Sum_probs=33.0
Q ss_pred eecccCCCceEE--EEeecc-cccccccccccC-CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMI--YGRMIP-CRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~I--YGRmIP-CKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
.-|.+|--.+.. ..+..| |.|+||.+|... .+....||.|...|.
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 468888766644 234566 999999999875 345678999988763
No 37
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=96.90 E-value=0.00066 Score=48.24 Aligned_cols=46 Identities=26% Similarity=0.564 Sum_probs=35.9
Q ss_pred eecccCCCceEEEEeecccccc-cccccccCCCCCCccCCCccceeeeeEe
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHV-FCLSCAQAPRSPPTCLRCGEGVTRVEPT 145 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHV-FCy~CA~l~k~~k~CprC~d~V~rIEq~ 145 (282)
..|.+|--...- ..++||.|. ||..|+.. ...||.|...|.++-+.
T Consensus 25 ~~C~iC~~~~~~-~~~~pCgH~~~C~~C~~~---~~~CP~Cr~~i~~~~~i 71 (74)
T 4ic3_A 25 KLCKICMDRNIA-IVFVPCGHLVTCKQCAEA---VDKCPMCYTVITFKQKI 71 (74)
T ss_dssp TBCTTTSSSBCC-EEEETTCCBCCCHHHHTT---CSBCTTTCCBCSEEEEC
T ss_pred CCCCCCCCCCCC-EEEcCCCChhHHHHhhhc---CccCCCcCcCccCcEEE
Confidence 568888765443 346799999 99999983 38999999999876543
No 38
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.78 E-value=0.0003 Score=48.75 Aligned_cols=45 Identities=24% Similarity=0.575 Sum_probs=34.7
Q ss_pred eecccCCCceEEEEeecccccccccccccC-------CCCCCccCCCccceee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-------PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-------~k~~k~CprC~d~V~r 141 (282)
..|.+|--.+.- -.++||.|+||.+|... ..+...||.|...+..
T Consensus 20 ~~C~IC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 20 VTCPICLELLTQ-PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCTTTCSCCSS-CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCcccCC-ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 679999877644 34569999999999875 1236789999998873
No 39
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.78 E-value=0.00011 Score=50.07 Aligned_cols=45 Identities=27% Similarity=0.722 Sum_probs=32.1
Q ss_pred eecccCCC-----ceEEEEeecccccccccccccC--CCCCCccCCCccceee
Q psy6453 96 HTCEKCEK-----PIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 96 HFCdkCdl-----PI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~r 141 (282)
..|++|-- |.. ...+.||.|+||.+|... .++...||.|...+.+
T Consensus 4 ~~C~IC~~~~~~~~~~-~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSL-KLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TCCSTTTTHHHHCSSC-CEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CcCCcCCCCccCCCcc-CeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 35788876 221 113579999999999875 2355789999998863
No 40
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=96.75 E-value=0.00044 Score=48.25 Aligned_cols=45 Identities=13% Similarity=0.158 Sum_probs=35.2
Q ss_pred ceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~ 140 (282)
...|.+|.-.+.- -.+.||.|+||..|... .++..+||.|...+.
T Consensus 8 ~~~C~IC~~~~~~-Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 8 YFRCPISLELMKD-PVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSCTTTSCCCSS-EEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred cCCCCCccccccC-CEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCC
Confidence 5789999876543 45569999999999876 334778999998875
No 41
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=96.73 E-value=0.00029 Score=53.60 Aligned_cols=45 Identities=20% Similarity=0.503 Sum_probs=33.8
Q ss_pred eecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~r 141 (282)
..|.+|--.+. --..+||.|.||..|... ......||.|...+..
T Consensus 53 ~~C~IC~~~~~-~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 53 FQCICCQELVF-RPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp TBCTTTSSBCS-SEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCcCChHHc-CcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 67999976554 345569999999999864 2244589999988863
No 42
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=96.71 E-value=6.6e-05 Score=49.91 Aligned_cols=45 Identities=24% Similarity=0.569 Sum_probs=33.6
Q ss_pred eecccCCCceEEE------EeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIY------GRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IY------GRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+..- ..+.||.|+||.+|... -+....||.|...+.
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 55 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 55 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCT
T ss_pred CCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCC
Confidence 4688887765431 26789999999999975 124678999998876
No 43
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.70 E-value=0.0004 Score=48.10 Aligned_cols=44 Identities=23% Similarity=0.486 Sum_probs=33.5
Q ss_pred eecccCCCceEEEEeecccccccccccccC--C-----CCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--P-----RSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~-----k~~k~CprC~d~V~ 140 (282)
..|.+|--.+.- ..+.||.|+||..|... . .....||.|...+.
T Consensus 20 ~~C~IC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 20 VTCPICLELLKE-PVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp TSCTTTCSCCSS-CEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred CCCcCCChhhCc-ceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 579999776543 23679999999999875 1 13677999998876
No 44
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=96.64 E-value=0.00032 Score=49.27 Aligned_cols=48 Identities=21% Similarity=0.536 Sum_probs=35.4
Q ss_pred ceecccCCCceEEEEeecc-cccccccccccC---CCCCCccCCCccceeeee
Q psy6453 95 IHTCEKCEKPIMIYGRMIP-CRHVFCLSCAQA---PRSPPTCLRCGEGVTRVE 143 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIP-CKHVFCy~CA~l---~k~~k~CprC~d~V~rIE 143 (282)
...|.+|.-.+.- -..+| |.|+||..|... .++...||.|...+.+..
T Consensus 15 ~~~C~IC~~~~~~-p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 15 ELLCLICKDIMTD-AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPD 66 (74)
T ss_dssp GGSCSSSCCCCTT-CEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTT
T ss_pred CCCCcCCChHHhC-CeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcc
Confidence 4679999776654 45589 999999999876 123468999999766443
No 45
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=96.63 E-value=0.0003 Score=52.33 Aligned_cols=47 Identities=26% Similarity=0.550 Sum_probs=35.1
Q ss_pred eecccCCCceE-----------------EEEeecccccccccccccCC------CCCCccCCCccceeee
Q psy6453 96 HTCEKCEKPIM-----------------IYGRMIPCRHVFCLSCAQAP------RSPPTCLRCGEGVTRV 142 (282)
Q Consensus 96 HFCdkCdlPI~-----------------IYGRmIPCKHVFCy~CA~l~------k~~k~CprC~d~V~rI 142 (282)
.-|.+|--++. ..+++.||.|+||.+|...- +....||.|...+...
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 57999965542 34668999999999997641 3456899999887643
No 46
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.60 E-value=0.00043 Score=50.86 Aligned_cols=44 Identities=27% Similarity=0.647 Sum_probs=32.7
Q ss_pred eecccCCCceEEEEeecccccccccccccC----CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA----PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l----~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+.- ....||.|+||..|... ..+...||.|...+.
T Consensus 22 ~~C~IC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 22 LECPICLELIKE-PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69 (112)
T ss_dssp TSCSSSCCCCSS-CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred CCCcccChhhcC-eEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCC
Confidence 579999776643 45579999999999875 122347999988765
No 47
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.58 E-value=0.00047 Score=46.52 Aligned_cols=39 Identities=28% Similarity=0.562 Sum_probs=29.1
Q ss_pred eecccCCCceEEEEeecccccccccccccCC----CCCCccCCC
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQAP----RSPPTCLRC 135 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~----k~~k~CprC 135 (282)
..|.+|--.+.- -+.+||.|+||..|...- .....||.|
T Consensus 21 ~~C~IC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 21 VICPICLDILQK-PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CBCTTTCSBCSS-CEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CCCCcCCchhCC-eEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 679999776654 344599999999998751 245579987
No 48
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.54 E-value=0.00035 Score=45.84 Aligned_cols=40 Identities=25% Similarity=0.561 Sum_probs=30.5
Q ss_pred ceecccCCCceEEEEeecccccccccccccCC----CCCCccCCC
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQAP----RSPPTCLRC 135 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~----k~~k~CprC 135 (282)
...|.+|--.+.. .++.||.|+||.+|...- +....||.|
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 15 EASCSVCLEYLKE-PVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCBCSSSCCBCSS-CCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred CCCCccCCcccCc-cEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3679999876654 466899999999998751 255779987
No 49
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.53 E-value=0.00073 Score=51.19 Aligned_cols=43 Identities=21% Similarity=0.546 Sum_probs=32.7
Q ss_pred eecccCCCceEEEEeec-ccccccccccccCCCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIYGRMI-PCRHVFCLSCAQAPRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmI-PCKHVFCy~CA~l~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+.- -.++ ||.|.||..|...-.. ..||.|...+.
T Consensus 23 ~~C~IC~~~~~~-pv~~~~CgH~fC~~Ci~~~~~-~~CP~Cr~~~~ 66 (117)
T 1jm7_B 23 LRCSRCTNILRE-PVCLGGCEHIFCSNCVSDCIG-TGCPVCYTPAW 66 (117)
T ss_dssp TSCSSSCSCCSS-CBCCCSSSCCBCTTTGGGGTT-TBCSSSCCBCS
T ss_pred CCCCCCChHhhC-ccEeCCCCCHHHHHHHHHHhc-CCCcCCCCcCc
Confidence 679999776654 3445 9999999999986322 67999988764
No 50
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=96.47 E-value=0.00047 Score=49.49 Aligned_cols=45 Identities=22% Similarity=0.574 Sum_probs=33.5
Q ss_pred ceecccCCCceEEEEeecc-cccccccccccC---CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIP-CRHVFCLSCAQA---PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIP-CKHVFCy~CA~l---~k~~k~CprC~d~V~ 140 (282)
...|.+|.-.+. --.++| |.|.||..|... ..+...||.|...+.
T Consensus 13 ~~~C~IC~~~~~-~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 13 ELLCLICKDIMT-DAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp TTEETTTTEECS-SCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CCCCCCCChhhc-CceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 478999976443 345789 999999999864 223468999998763
No 51
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=96.30 E-value=0.00083 Score=53.97 Aligned_cols=44 Identities=20% Similarity=0.483 Sum_probs=33.6
Q ss_pred eecccCCCceEEEEeecccccccccccccC--CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~ 140 (282)
..|.+|--.+.- ...+||.|.||..|... ..+...||.|...+.
T Consensus 79 ~~C~IC~~~~~~-pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 124 (150)
T 1z6u_A 79 FMCVCCQELVYQ-PVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLG 124 (150)
T ss_dssp TBCTTTSSBCSS-EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CEeecCChhhcC-CEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCC
Confidence 679999775543 44579999999999875 233457999998876
No 52
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.05 E-value=0.0017 Score=46.75 Aligned_cols=46 Identities=22% Similarity=0.412 Sum_probs=33.2
Q ss_pred eecccCCCceEE--------------EEeecccccccccccccC-CCCCCccCCCccceee
Q psy6453 96 HTCEKCEKPIMI--------------YGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 96 HFCdkCdlPI~I--------------YGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~r 141 (282)
--|.+|--++.- -.++-+|.|+|+.+|... -+..++||.|...+..
T Consensus 16 ~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 16 DTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp SCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCE
T ss_pred CCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcch
Confidence 358888777643 223345999999999886 3355799999998763
No 53
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=96.02 E-value=0.0014 Score=61.59 Aligned_cols=50 Identities=24% Similarity=0.553 Sum_probs=38.6
Q ss_pred eecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceeeeeEec
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTRVEPTG 146 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~rIEq~~ 146 (282)
..|.+|--.. .-.++.||.|+||..|... ......||.|...|...+...
T Consensus 333 ~~C~ICle~~-~~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~~i~ 384 (389)
T 2y1n_A 333 QLCKICAEND-KDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPIV 384 (389)
T ss_dssp SBCTTTSSSB-CCEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEEECS
T ss_pred CCCCccCcCC-CCeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCceeEe
Confidence 6799996554 3457789999999999864 114678999999999876654
No 54
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=95.57 E-value=0.0019 Score=47.42 Aligned_cols=45 Identities=22% Similarity=0.518 Sum_probs=33.9
Q ss_pred eecccCCCceEEE-Eeecc--cccccccccccC--CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIY-GRMIP--CRHVFCLSCAQA--PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IY-GRmIP--CKHVFCy~CA~l--~k~~k~CprC~d~V~ 140 (282)
.-|++|--|+.+- -+..| |.|.||..|... .+....||.|...+.
T Consensus 12 ~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~ 61 (78)
T 1e4u_A 12 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYP 61 (78)
T ss_dssp CBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCS
T ss_pred CcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccC
Confidence 6799999988542 23444 999999999865 235678999988776
No 55
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=95.56 E-value=0.0038 Score=48.29 Aligned_cols=45 Identities=20% Similarity=0.392 Sum_probs=34.4
Q ss_pred eecccCCCceEEE-----------------EeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIY-----------------GRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IY-----------------GRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
.-|.+|--.+..- .++.||.|+|+..|... .+...+||.|.....
T Consensus 38 d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 38 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp CCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcce
Confidence 5688887665532 46679999999999986 235788999998853
No 56
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=95.55 E-value=0.0075 Score=55.15 Aligned_cols=46 Identities=28% Similarity=0.599 Sum_probs=36.4
Q ss_pred eecccCCCceEEEEeecccccc-cccccccCCCCCCccCCCccceeeeeEe
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHV-FCLSCAQAPRSPPTCLRCGEGVTRVEPT 145 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHV-FCy~CA~l~k~~k~CprC~d~V~rIEq~ 145 (282)
..|.+|--...- ..++||.|. ||..|+.. ...||.|...|.++-+.
T Consensus 296 ~~C~IC~~~~~~-~v~lpCgH~~fC~~C~~~---~~~CP~CR~~i~~~~~i 342 (345)
T 3t6p_A 296 RTCKVCMDKEVS-VVFIPCGHLVVCQECAPS---LRKCPICRGIIKGTVRT 342 (345)
T ss_dssp CBCTTTSSSBCC-EEEETTCCEEECTTTGGG---CSBCTTTCCBCCEEEEC
T ss_pred CCCCccCCcCCc-eEEcCCCChhHhHHHHhc---CCcCCCCCCCccCeEEe
Confidence 679999655433 456699999 99999993 48899999999877554
No 57
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=94.82 E-value=0.002 Score=47.65 Aligned_cols=46 Identities=24% Similarity=0.552 Sum_probs=35.0
Q ss_pred ceecccCCCceEEE------EeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIY------GRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IY------GRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
...|.+|.-.+..- .+..+|.|+||.+|... .+..+.||.|...+.
T Consensus 72 ~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 124 (133)
T 4ap4_A 72 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 124 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCC
T ss_pred CCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCC
Confidence 36799998766431 25779999999999875 234578999998876
No 58
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=94.29 E-value=0.011 Score=48.65 Aligned_cols=50 Identities=8% Similarity=-0.156 Sum_probs=35.2
Q ss_pred ccCCcceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCcccee
Q psy6453 90 VLNPIIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVT 140 (282)
Q Consensus 90 ~~np~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~ 140 (282)
...|....|++|.-...- =.++||.|.||..|... ..+..+||.|...+.
T Consensus 203 ~~~~~~~~c~i~~~~~~d-Pv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~ 254 (281)
T 2c2l_A 203 RDIPDYLCGKISFELMRE-PCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLT 254 (281)
T ss_dssp CCCCSTTBCTTTCSBCSS-EEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCC
T ss_pred CCCCcccCCcCcCCHhcC-CeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCc
Confidence 344556789999665432 33479999999999875 223445999998775
No 59
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=93.97 E-value=0.017 Score=42.07 Aligned_cols=31 Identities=23% Similarity=0.671 Sum_probs=22.6
Q ss_pred ceecccCC--CceEEEEeecccccccccccccC
Q psy6453 95 IHTCEKCE--KPIMIYGRMIPCRHVFCLSCAQA 125 (282)
Q Consensus 95 iHFCdkCd--lPI~IYGRmIPCKHVFCy~CA~l 125 (282)
...|.+|- ++.-.-.++.||.|.||.+|.+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~ 37 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQ 37 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHH
Confidence 36799995 33334456669999999999873
No 60
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=93.73 E-value=0.018 Score=45.79 Aligned_cols=45 Identities=20% Similarity=0.378 Sum_probs=0.0
Q ss_pred eecccCCCceEE-----------------EEeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMI-----------------YGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~I-----------------YGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
-.|.+|--.|.. -....||.|+|+..|... .+...+||.|.....
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp ---------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeee
Confidence 468888777653 123359999999999986 345678999988743
No 61
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=93.14 E-value=0.022 Score=43.97 Aligned_cols=61 Identities=20% Similarity=0.467 Sum_probs=46.7
Q ss_pred cceecccCCCceEEEEeecccccccccccccCCCCCCccCCCccceeeeeEecCCcEEEcccCCccc
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVTRVEPTGLGTVFMCTHGGARH 160 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~rIEq~~lgsVFMCt~gg~r~ 160 (282)
|...|++|.-++.-.|+ +.+|-.|.+.-.....||.|..+++.+..++-. -|.|.+|+.--
T Consensus 1 M~~~CP~C~~~l~~~~~-----~~~C~~C~~~~~~~afCPeCgq~Le~lkACGA~-~yFC~~C~~Li 61 (81)
T 2jrp_A 1 MEITCPVCHHALERNGD-----TAHCETCAKDFSLQALCPDCRQPLQVLKACGAV-DYFCQNGHGLI 61 (81)
T ss_dssp CCCCCSSSCSCCEECSS-----EEECTTTCCEEEEEEECSSSCSCCCEEEETTEE-EECCTTTTCCC
T ss_pred CCCCCCCCCCccccCCC-----ceECccccccCCCcccCcchhhHHHHHHhcCCc-CeeeccCCCEe
Confidence 34679999999988877 567999988733445999999999998887744 67788766543
No 62
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=91.82 E-value=0.052 Score=41.12 Aligned_cols=47 Identities=13% Similarity=-0.031 Sum_probs=33.4
Q ss_pred CcceecccCCCceEEEEeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 93 PIIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 93 p~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
|....|++|.-... -=.++||.|.||..|... -.+..+||.|...+.
T Consensus 27 p~~~~CpI~~~~m~-dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~ 74 (100)
T 2kre_A 27 PDEFRDPLMDTLMT-DPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLT 74 (100)
T ss_dssp STTTBCTTTCSBCS-SEEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCC
T ss_pred cHhhCCcCccCccc-CCeECCCCCEEchHHHHHHHHcCCCCCCCCCCCC
Confidence 33477888875332 233468999999999876 235678999988765
No 63
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=90.31 E-value=0.23 Score=27.86 Aligned_cols=24 Identities=21% Similarity=0.501 Sum_probs=20.1
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+...|+.|+.
T Consensus 5 ~k~~~C~~---------C~k~f~~~~~L~~H~~ 28 (35)
T 2elx_A 5 SSGYVCAL---------CLKKFVSSIRLRSHIR 28 (35)
T ss_dssp CCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCeECCC---------CcchhCCHHHHHHHHH
Confidence 34577774 9999999999999987
No 64
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=90.29 E-value=0.075 Score=48.27 Aligned_cols=31 Identities=29% Similarity=0.208 Sum_probs=27.8
Q ss_pred ceecccCCCceEEEEeecccccccccccccC
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA 125 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l 125 (282)
...|++|.-++.-=.+.+.|.|+||..|...
T Consensus 181 el~CPIcl~~f~DPVts~~CGHsFcR~cI~~ 211 (267)
T 3htk_C 181 ELTCPITCKPYEAPLISRKCNHVFDRDGIQN 211 (267)
T ss_dssp CSBCTTTSSBCSSEEEESSSCCEEEHHHHHH
T ss_pred eeECcCccCcccCCeeeCCCCCcccHHHHHH
Confidence 5789999999988888889999999999984
No 65
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=90.27 E-value=0.18 Score=29.50 Aligned_cols=27 Identities=26% Similarity=0.429 Sum_probs=23.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|. .+.|.++|.+..+|+.|+.
T Consensus 5 ~~k~~~C~-------~~~C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 5 KKKQHICH-------IQGCGKVYGKTSHLRAHLR 31 (37)
T ss_dssp SCCCEECC-------STTCCCEESCHHHHHHHHH
T ss_pred CCCCCCCC-------CCCCCCccCCHHHHHHHHH
Confidence 34568998 3789999999999999986
No 66
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=89.91 E-value=0.13 Score=28.47 Aligned_cols=18 Identities=17% Similarity=0.377 Sum_probs=16.8
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
..|.++|.+..+|+.|+.
T Consensus 8 ~~C~k~f~~~~~L~~H~~ 25 (31)
T 1sp2_A 8 SYCGKRFTRSDELQRHKR 25 (31)
T ss_dssp TTCCCBCSSHHHHHHHHT
T ss_pred CCCCcccCCHhHHHHHHH
Confidence 689999999999999986
No 67
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=89.86 E-value=0.28 Score=27.74 Aligned_cols=24 Identities=13% Similarity=0.336 Sum_probs=20.2
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. -|.++|.+..+|+.|+.
T Consensus 5 ~k~~~C~---------~C~k~f~~~~~l~~H~~ 28 (35)
T 1srk_A 5 KRPFVCR---------ICLSAFTTKANCARHLK 28 (35)
T ss_dssp CSCEECS---------SSCCEESSHHHHHHHHG
T ss_pred CcCeeCC---------CCCcccCCHHHHHHHHH
Confidence 3457787 39999999999999986
No 68
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=89.40 E-value=0.22 Score=28.77 Aligned_cols=26 Identities=23% Similarity=0.627 Sum_probs=22.2
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. ...|.++|.+..+|+.|+.
T Consensus 4 ~k~~~C~-------~~~C~k~f~~~~~L~~H~~ 29 (38)
T 1bhi_A 4 DKPFLCT-------APGCGQRFTNEDHLAVHKH 29 (38)
T ss_dssp CCCEECC-------CTTTCCEESSHHHHHHHHH
T ss_pred CcceECC-------CCCCCcccCCHHHHHHHHH
Confidence 4458888 3689999999999999986
No 69
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.39 E-value=0.048 Score=40.24 Aligned_cols=58 Identities=19% Similarity=0.292 Sum_probs=38.4
Q ss_pred ceecccCCCceEEEEeecc-cccccccccccCCCCCCccCCCccceeeeeEe-cCCcEEEcccCCccccCccccccccCh
Q psy6453 95 IHTCEKCEKPIMIYGRMIP-CRHVFCLSCAQAPRSPPTCLRCGEGVTRVEPT-GLGTVFMCTHGGARHSTAGCKRTYLSQ 172 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIP-CKHVFCy~CA~l~k~~k~CprC~d~V~rIEq~-~lgsVFMCt~gg~r~~v~gCkRTYLSQ 172 (282)
...|++|.-++.- =.++| |.|+||..|...- ++.. ..+..+.|. +.||++.|++.
T Consensus 7 ~~~CPI~~~~~~d-PV~~~~cGh~f~r~cI~~~---------------l~~~~~~~~~~~CP-------~tgc~~~~l~~ 63 (94)
T 2yu4_A 7 GFTCPITKEEMKK-PVKNKVCGHTYEEDAIVRM---------------IESRQKRKKKAYCP-------QIGCSHTDIRK 63 (94)
T ss_dssp CCBCTTTCSBCSS-EEEESSSCCEEEHHHHHHH---------------HHHHHTTTCCBCCC-------STTCCCCCBCG
T ss_pred EeECcCcCchhcC-CEEcCCCCCeecHHHHHHH---------------HHHccCcCCCCCCC-------cCcCcccccCH
Confidence 4679999876554 44465 9999999998741 1111 123456788 58888877776
Q ss_pred HhH
Q psy6453 173 RDL 175 (282)
Q Consensus 173 RDL 175 (282)
.+|
T Consensus 64 ~~L 66 (94)
T 2yu4_A 64 SDL 66 (94)
T ss_dssp GGE
T ss_pred hhC
Confidence 665
No 70
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=89.04 E-value=0.12 Score=38.92 Aligned_cols=45 Identities=11% Similarity=-0.169 Sum_probs=32.1
Q ss_pred ceecccCCCceEEEEeecccc-cccccccccC-CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCR-HVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCK-HVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
...|++|.-...- =.++||. |+||..|... -....+||.|...+.
T Consensus 22 ~~~CpI~~~~m~d-PV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~ 68 (98)
T 1wgm_A 22 EFLDPIMSTLMCD-PVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLT 68 (98)
T ss_dssp TTBCTTTCSBCSS-EEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCC
T ss_pred hcCCcCccccccC-CeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCC
Confidence 4678888754432 3346999 9999999876 224678999987765
No 71
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=88.54 E-value=0.31 Score=25.92 Aligned_cols=23 Identities=22% Similarity=0.622 Sum_probs=19.7
Q ss_pred EEcccCCccccCccccccccChHhHHHHhh
Q psy6453 151 FMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 151 FMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
|.|. ...|.++|.++.+|+.|+.
T Consensus 3 ~~C~-------~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 3 YVCH-------FENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EEEC-------STTTCEEESSHHHHHHHHG
T ss_pred CCCc-------CCcCcCccCCHHHHHHHHH
Confidence 6677 2679999999999999976
No 72
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.28 E-value=0.29 Score=31.11 Aligned_cols=26 Identities=27% Similarity=0.498 Sum_probs=22.8
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. ..+|.++|.+...|+.|+.
T Consensus 7 ekp~~C~-------~~~C~k~F~~~~~L~~H~r 32 (38)
T 2eln_A 7 GILLKCP-------TDGCDYSTPDKYKLQAHLK 32 (38)
T ss_dssp CCCEECS-------SSSCCCEESCHHHHHHHHH
T ss_pred CCCCCCC-------CCCCCCccCCHHHHHHHHH
Confidence 4569998 4799999999999999976
No 73
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=88.18 E-value=0.21 Score=27.77 Aligned_cols=18 Identities=22% Similarity=0.750 Sum_probs=16.8
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
+.|.++|.+..+|+.|+.
T Consensus 9 ~~C~k~f~~~~~L~~H~~ 26 (32)
T 1zfd_A 9 PGCDKAFVRNHDLIRHKK 26 (32)
T ss_dssp TTCCCCBSSSHHHHHHHG
T ss_pred CCCCCccCCHHHHHHHHH
Confidence 589999999999999987
No 74
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=87.54 E-value=0.3 Score=30.67 Aligned_cols=27 Identities=19% Similarity=0.356 Sum_probs=22.6
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
+.-|.|.+ |.++|....+|+.|++..|
T Consensus 5 ~kp~~C~~---------C~k~F~~~~~L~~H~~~~H 31 (48)
T 3iuf_A 5 DKPYACDI---------CGKRYKNRPGLSYHYAHSH 31 (48)
T ss_dssp TSCEECTT---------TCCEESSHHHHHHHHHHSS
T ss_pred CcCEECCC---------cCcccCCHHHHHHHhhhhc
Confidence 44588873 9999999999999998556
No 75
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=87.43 E-value=0.36 Score=25.80 Aligned_cols=17 Identities=12% Similarity=0.270 Sum_probs=15.6
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 8 ~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 8 VCGKRFSLKHQMETHYR 24 (28)
T ss_dssp SSCCEESCHHHHHHHHT
T ss_pred CCCcccCCHHHHHHHHH
Confidence 49999999999999986
No 76
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=87.35 E-value=0.35 Score=25.85 Aligned_cols=17 Identities=12% Similarity=0.280 Sum_probs=15.6
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.+.|.+..+|+.|+.
T Consensus 7 ~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 7 ECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp SSSCEESCSHHHHHHHT
T ss_pred CCCchhCCHHHHHHHHH
Confidence 49999999999999987
No 77
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=86.99 E-value=0.077 Score=38.70 Aligned_cols=45 Identities=13% Similarity=-0.076 Sum_probs=32.2
Q ss_pred ceecccCCCceEEEEeecccccccccccccC-CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
...|++|.-... -=.++||.|.||..|... -.+..+||.|+..+.
T Consensus 14 ~~~CpI~~~~m~-dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~ 59 (85)
T 2kr4_A 14 EFRDPLMDTLMT-DPVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLT 59 (85)
T ss_dssp TTBCTTTCSBCS-SEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCC
T ss_pred heECcccCchhc-CCeECCCCCEECHHHHHHHHhcCCCCCCCcCCCC
Confidence 467888875433 234579999999999875 124578999987764
No 78
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=86.97 E-value=0.47 Score=31.26 Aligned_cols=18 Identities=11% Similarity=0.357 Sum_probs=9.5
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
++|.++|.+..+|+.|++
T Consensus 44 ~~C~k~f~~~~~L~~H~~ 61 (79)
T 2dlk_A 44 PACGKSFNFKKHLKEHMK 61 (79)
T ss_dssp TTTCCEESSHHHHHHHHH
T ss_pred CCCcCccCCHHHHHHHHH
Confidence 455555555555555544
No 79
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.76 E-value=0.55 Score=27.60 Aligned_cols=24 Identities=21% Similarity=0.558 Sum_probs=20.5
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+..+|+.|++
T Consensus 8 ~k~~~C~~---------C~k~f~~~~~L~~H~~ 31 (41)
T 2ept_A 8 QRVYECQE---------CGKSFRQKGSLTLHER 31 (41)
T ss_dssp CCCEECSS---------SCCEESSHHHHHHHGG
T ss_pred CCCeECCC---------CCCCcCCHHHHHHHHH
Confidence 45688874 9999999999999986
No 80
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=86.75 E-value=0.37 Score=31.59 Aligned_cols=27 Identities=33% Similarity=0.655 Sum_probs=23.9
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
....|.|.+ ++|.++|.+..+|+.|++
T Consensus 14 ~~~~~~C~~-------~~C~k~f~~~~~L~~H~~ 40 (72)
T 2epa_A 14 RIRSHICSH-------PGCGKTYFKSSHLKAHTR 40 (72)
T ss_dssp CCCCEECSS-------TTTCCEESSHHHHHHHHH
T ss_pred ccCceeCCC-------CCCccccCCHHHHHHHHH
Confidence 456799994 789999999999999987
No 81
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=86.72 E-value=0.61 Score=27.21 Aligned_cols=23 Identities=26% Similarity=0.544 Sum_probs=19.6
Q ss_pred cEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 149 TVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 149 sVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.-|.|.+ |.++|.+...|+.|+.
T Consensus 5 k~~~C~~---------C~k~f~~~~~L~~H~~ 27 (39)
T 1njq_A 5 RSYTCSF---------CKREFRSAQALGGHMN 27 (39)
T ss_dssp SSEECTT---------TCCEESSHHHHHHHHH
T ss_pred CceECCC---------CCcccCCHHHHHHHHH
Confidence 3477773 9999999999999987
No 82
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=86.65 E-value=0.43 Score=25.31 Aligned_cols=22 Identities=18% Similarity=0.391 Sum_probs=19.0
Q ss_pred EEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 150 VFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 150 VFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
-|.|. .|.++|.+...|+.|+.
T Consensus 3 ~~~C~---------~C~~~f~~~~~l~~H~~ 24 (30)
T 2m0d_A 3 PYQCD---------YCGRSFSDPTSKMRHLE 24 (30)
T ss_dssp CEECT---------TTCCEESCHHHHHHHHH
T ss_pred CccCC---------CCCcccCCHHHHHHHHH
Confidence 46777 39999999999999987
No 83
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.13 E-value=0.61 Score=28.06 Aligned_cols=25 Identities=16% Similarity=0.480 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~~~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2emi_A 9 GERHYECSE---------CGKAFIQKSTLSMHQR 33 (46)
T ss_dssp SCCCEECSS---------SCCEESSHHHHHHHHG
T ss_pred CCCCCCCCC---------CCcccCCHHHHHHHHh
Confidence 355688884 9999999999999987
No 84
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=86.10 E-value=0.21 Score=36.61 Aligned_cols=28 Identities=25% Similarity=0.365 Sum_probs=24.8
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+..|.|.+ |.++|.+...|+.|++-.|
T Consensus 53 ~~k~~~C~~---------C~k~F~~~~~L~~H~~~~H 80 (85)
T 2lv2_A 53 AAQVFPCKY---------CPATFYSSPGLTRHINKCH 80 (85)
T ss_dssp CSSSEECTT---------SSCEESSHHHHHHHHHTTC
T ss_pred CCCccCCCC---------CCCEeCCHHHHHHhCcccC
Confidence 466799984 9999999999999998888
No 85
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=85.92 E-value=0.49 Score=25.29 Aligned_cols=17 Identities=12% Similarity=0.028 Sum_probs=15.5
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|++
T Consensus 8 ~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 8 LCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp SSSCEESSHHHHHHHHH
T ss_pred CcChhhCCHHHHHHHHH
Confidence 49999999999999986
No 86
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=85.90 E-value=0.17 Score=42.89 Aligned_cols=48 Identities=8% Similarity=-0.130 Sum_probs=33.8
Q ss_pred CCcceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCcccee
Q psy6453 92 NPIIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVT 140 (282)
Q Consensus 92 np~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~ 140 (282)
-|....|++|.-+..- =.++||.|+||..|... .....+||.|...+.
T Consensus 103 ip~~f~CPI~~elm~D-PV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~ 152 (179)
T 2f42_A 103 IPDYLCGKISFELMRE-PCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLT 152 (179)
T ss_dssp CCGGGBCTTTCSBCSS-EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CcHhhcccCccccCCC-CeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCC
Confidence 3556889999765543 34459999999999775 222347999987664
No 87
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=85.86 E-value=0.49 Score=25.01 Aligned_cols=17 Identities=18% Similarity=0.382 Sum_probs=15.5
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 7 ~C~k~f~~~~~l~~H~~ 23 (29)
T 2m0f_A 7 ECGKQFTTSGNLKRHLR 23 (29)
T ss_dssp TTSCEESCHHHHHHHHH
T ss_pred CCCCccCChhHHHHHHH
Confidence 39999999999999986
No 88
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=85.75 E-value=0.36 Score=27.73 Aligned_cols=17 Identities=12% Similarity=0.319 Sum_probs=15.8
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 7 ~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 7 ECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp SSCCCCSSHHHHHHHHH
T ss_pred CCCchhCCHHHHHHHHH
Confidence 59999999999999987
No 89
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.53 E-value=0.62 Score=28.01 Aligned_cols=25 Identities=28% Similarity=0.630 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (45)
T 2epu_A 9 GQKPFECTH---------CGKSFRAKGNLVTHQR 33 (45)
T ss_dssp SCCSEEETT---------TTEEESSHHHHHHHHT
T ss_pred CCcCccCCC---------CCCccCChHHHHHHHH
Confidence 345688884 9999999999999986
No 90
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.51 E-value=0.72 Score=27.75 Aligned_cols=27 Identities=26% Similarity=0.428 Sum_probs=22.9
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|. .+.|.++|.+...|+.|+.
T Consensus 9 ~~k~~~C~-------~~~C~k~f~~~~~L~~H~~ 35 (48)
T 2ent_A 9 GEKPFACT-------WPGCGWRFSRSDELSRHRR 35 (48)
T ss_dssp CCCCEECC-------SSSCCCEESSHHHHHHHHT
T ss_pred CCCCeECC-------CCCCCCccCCHHHHHHHHH
Confidence 35568898 3689999999999999987
No 91
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=85.49 E-value=0.41 Score=30.76 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=10.5
Q ss_pred ccccccChHhHHHHhh
Q psy6453 165 CKRTYLSQRDLMALGR 180 (282)
Q Consensus 165 CkRTYLSQRDLQAHIn 180 (282)
|.++|.+..+|+.|++
T Consensus 16 C~k~f~~~~~l~~H~~ 31 (66)
T 2drp_A 16 CSRVYTHISNFCRHYV 31 (66)
T ss_dssp TCCEESSHHHHHHHHH
T ss_pred CcchhCCHHHHHHHHH
Confidence 6666666666666665
No 92
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=85.27 E-value=0.53 Score=25.47 Aligned_cols=17 Identities=24% Similarity=0.184 Sum_probs=15.5
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 8 ~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 8 LCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TTTEEESCHHHHHHHHT
T ss_pred CCCcccCCHHHHHHHHH
Confidence 49999999999999975
No 93
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=85.01 E-value=0.77 Score=26.97 Aligned_cols=24 Identities=17% Similarity=0.577 Sum_probs=20.5
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 8 ~k~~~C~~---------C~k~f~~~~~L~~H~~ 31 (42)
T 2el5_A 8 ENPYECSE---------CGKAFNRKDQLISHQR 31 (42)
T ss_dssp CCSEECSS---------SCCEESSHHHHHHHHG
T ss_pred CCCccCCC---------cChhhCCHHHHHHHHH
Confidence 45688874 9999999999999986
No 94
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.00 E-value=0.72 Score=27.86 Aligned_cols=25 Identities=16% Similarity=0.473 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.. |.++|.+..+|+.|++
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2ytp_A 9 GERHYECSE---------CGKAFARKSTLIMHQR 33 (46)
T ss_dssp CCCCEECSS---------SCCEESSHHHHHHHHT
T ss_pred CCCCeECCc---------CCcccCCHHHHHHHHH
Confidence 355688884 9999999999999987
No 95
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=84.92 E-value=0.52 Score=31.49 Aligned_cols=26 Identities=35% Similarity=0.557 Sum_probs=17.6
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
...|.|. .++|.++|.++..|+.|++
T Consensus 3 ~~~~~C~-------~~~C~~~f~~~~~l~~H~~ 28 (89)
T 2wbs_A 3 TATHTCD-------YAGCGKTYTKSSHLKAHLR 28 (89)
T ss_dssp CCCEECC-------STTTCCEESSHHHHHHHHT
T ss_pred CCCeeCC-------CCCCCCcCCCHHHHHHHHH
Confidence 3456777 3667777777777777766
No 96
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=84.90 E-value=0.75 Score=27.65 Aligned_cols=25 Identities=12% Similarity=0.381 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ema_A 9 GEKRYKCNE---------CGKVFSRNSQLSQHQK 33 (46)
T ss_dssp TSCCEECSS---------SCCEESSHHHHHHHHT
T ss_pred CCcCcCCCC---------CcchhCCHHHHHHHHH
Confidence 355688884 9999999999999986
No 97
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.77 E-value=0.81 Score=27.50 Aligned_cols=25 Identities=20% Similarity=0.519 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2em7_A 9 GEKPYKCEE---------CGKGFICRRDLYTHHM 33 (46)
T ss_dssp CCCSEECSS---------SCCEESCHHHHHHHGG
T ss_pred CCcCccCCC---------ccchhCCHHHHHHHHH
Confidence 345688874 9999999999999987
No 98
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=84.56 E-value=0.79 Score=27.42 Aligned_cols=25 Identities=20% Similarity=0.457 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2el4_A 9 GVKPYGCSQ---------CAKTFSLKSQLIVHQR 33 (46)
T ss_dssp CCCSEECSS---------SSCEESSHHHHHHHGG
T ss_pred CCCceECCC---------CCchhCCHHHHHHHHH
Confidence 345688884 9999999999999986
No 99
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=84.55 E-value=0.75 Score=28.22 Aligned_cols=25 Identities=12% Similarity=0.187 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+...|+.|++
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (48)
T 2epr_A 9 TRKQVACEI---------CGKIFRDVYHLNRHKL 33 (48)
T ss_dssp CCCSEEETT---------TTEEESSHHHHHHHGG
T ss_pred CCcCeeCCC---------CCcccCCHHHHHHHHH
Confidence 345688884 9999999999999987
No 100
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.49 E-value=0.74 Score=27.68 Aligned_cols=25 Identities=20% Similarity=0.380 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ysp_A 9 GEKPYKCEK---------CGKGYNSKFNLDMHQK 33 (46)
T ss_dssp SCCSEEETT---------TTEEESCHHHHHHHHT
T ss_pred CCCCeECCC---------CCCccCCHHHHHHHHH
Confidence 455688874 9999999999999987
No 101
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=84.41 E-value=0.81 Score=26.74 Aligned_cols=25 Identities=20% Similarity=0.531 Sum_probs=20.9
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 8 ~~~~~~C~~---------C~k~f~~~~~l~~H~~ 32 (42)
T 2epc_A 8 GETPYLCGQ---------CGKSFTQRGSLAVHQR 32 (42)
T ss_dssp SSCCEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCeECCC---------CCcccCCHHHHHHHhh
Confidence 345688874 9999999999999986
No 102
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.35 E-value=0.76 Score=27.63 Aligned_cols=25 Identities=16% Similarity=0.377 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ep0_A 9 GEKPYKCDV---------CHKSFRYGSSLTVHQR 33 (46)
T ss_dssp TCCSEECSS---------SCCEESSHHHHHHHHT
T ss_pred CCCCeeCcc---------cCcccCChHHHHHHHH
Confidence 345688874 9999999999999986
No 103
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.29 E-value=0.82 Score=27.58 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2emf_A 9 GGKHFECTE---------CGKAFTRKSTLSMHQK 33 (46)
T ss_dssp SSCCEECSS---------SCCEESCHHHHHHHGG
T ss_pred CCCCeECCC---------CCchhCCHHHHHHHHH
Confidence 345688874 9999999999999987
No 104
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.29 E-value=0.7 Score=27.78 Aligned_cols=25 Identities=16% Similarity=0.464 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2emy_A 9 GENPYECHE---------CGKAFSRKYQLISHQR 33 (46)
T ss_dssp SSCCEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCcCcCCCC---------CCcccCcHHHHHHHHH
Confidence 355688884 9999999999999987
No 105
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.28 E-value=0.61 Score=26.54 Aligned_cols=24 Identities=29% Similarity=0.481 Sum_probs=20.5
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+..|.|.. |.++|.+...|+.|++
T Consensus 7 ~k~~~C~~---------C~k~f~~~~~l~~H~~ 30 (36)
T 2elq_A 7 GKPFKCSL---------CEYATRSKSNLKAHMN 30 (36)
T ss_dssp CCSEECSS---------SSCEESCHHHHHHHHH
T ss_pred CCCccCCC---------CCchhCCHHHHHHHHH
Confidence 45688873 9999999999999986
No 106
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.21 E-value=0.82 Score=27.47 Aligned_cols=25 Identities=12% Similarity=0.511 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ytj_A 9 GEKPYICAE---------CGKAFTIRSNLIKHQK 33 (46)
T ss_dssp SCCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCcCeECCC---------CChhhCCHHHHHHHHH
Confidence 355688884 9999999999999986
No 107
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.13 E-value=0.91 Score=27.02 Aligned_cols=24 Identities=17% Similarity=0.548 Sum_probs=20.5
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.. |.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (44)
T 2emb_A 10 RKRYECSK---------CQATFNLRKHLIQHQK 33 (44)
T ss_dssp CSSEECTT---------TCCEESCHHHHHHHGG
T ss_pred CCCeECCC---------CCCccCCHHHHHHHHH
Confidence 45688874 9999999999999987
No 108
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.03 E-value=0.8 Score=27.40 Aligned_cols=25 Identities=16% Similarity=0.444 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2yrj_A 9 GEKPYRCGE---------CGKAFAQKANLTQHQR 33 (46)
T ss_dssp CCCCEECSS---------SCCEESSHHHHHHHHT
T ss_pred CCCCeECCC---------CCCccCCHHHHHHHHH
Confidence 355688884 9999999999999986
No 109
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=83.96 E-value=0.42 Score=25.38 Aligned_cols=17 Identities=29% Similarity=0.425 Sum_probs=15.7
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 7 ~C~~~f~~~~~l~~H~~ 23 (29)
T 1ard_A 7 VCTRAFARQEHLKRHYR 23 (29)
T ss_dssp TTCCBCSSHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHH
Confidence 59999999999999987
No 110
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.93 E-value=0.86 Score=27.27 Aligned_cols=25 Identities=16% Similarity=0.541 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.. |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2yts_A 9 GEKPYICNE---------CGKSFIQKSHLNRHRR 33 (46)
T ss_dssp SCCSEECSS---------SCCEESSHHHHHHHGG
T ss_pred CCcCEECCC---------CChhhCChHHHHHHHH
Confidence 355688884 9999999999999986
No 111
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.92 E-value=0.89 Score=27.30 Aligned_cols=25 Identities=16% Similarity=0.424 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2eml_A 9 GEKPYECSV---------CGKAFSHRQSLSVHQR 33 (46)
T ss_dssp SCCSEECSS---------SCCEESSHHHHHHHHG
T ss_pred CCCCeeCCC---------cCCccCCHHHHHHHHH
Confidence 455688884 9999999999999987
No 112
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.92 E-value=0.69 Score=27.93 Aligned_cols=25 Identities=24% Similarity=0.410 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2em8_A 9 GEKPYKCVE---------CGKGYKRRLDLDFHQR 33 (46)
T ss_dssp SCCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCeECcc---------cCchhCCHHHHHHHHH
Confidence 345688874 9999999999999987
No 113
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.91 E-value=0.78 Score=27.57 Aligned_cols=25 Identities=12% Similarity=0.386 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~~~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2em3_A 9 GEKPYECKV---------CSKAFTQKAHLAQHQK 33 (46)
T ss_dssp SCCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCcCeECCC---------CCcccCCHHHHHHHHH
Confidence 355688884 9999999999999987
No 114
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.85 E-value=0.78 Score=27.45 Aligned_cols=25 Identities=20% Similarity=0.578 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ytf_A 9 GEKPFECSE---------CQKAFNTKSNLIVHQR 33 (46)
T ss_dssp CCCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCcCCCC---------CCcccCCHHHHHHHHH
Confidence 345688884 9999999999999987
No 115
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.81 E-value=0.88 Score=27.29 Aligned_cols=25 Identities=16% Similarity=0.438 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (44)
T 2epv_A 9 GEKPYECNE---------CGKAFIWKSLLIVHER 33 (44)
T ss_dssp CCCSEECSS---------SCCEESSHHHHHHHHG
T ss_pred CCcCeECCC---------CCcccCchHHHHHHHh
Confidence 355688874 9999999999999987
No 116
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.68 E-value=0.89 Score=27.32 Aligned_cols=25 Identities=16% Similarity=0.355 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ene_A 9 GEKPYKCNE---------CGKVFRHNSYLSRHQR 33 (46)
T ss_dssp CSSSEECSS---------SCCEESSHHHHHHHHT
T ss_pred CCCCeECCC---------CCchhCChHHHHHHHh
Confidence 345688874 9999999999999987
No 117
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.66 E-value=0.93 Score=27.22 Aligned_cols=25 Identities=20% Similarity=0.460 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2en1_A 9 GEKPFKCEE---------CGKRFTQNSQLHSHQR 33 (46)
T ss_dssp CCCSEEETT---------TTEEESSHHHHHHHGG
T ss_pred CCCCeeCCC---------CCcccCCHHHHHHHHH
Confidence 345688874 9999999999999986
No 118
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.56 E-value=0.89 Score=27.31 Aligned_cols=25 Identities=12% Similarity=0.304 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2eq0_A 9 GEKPYKCHE---------CGKVFRRNSHLARHQL 33 (46)
T ss_dssp CCCCEECTT---------TCCEESSHHHHHHHHT
T ss_pred CCCCeECCC---------CCchhCCHHHHHHHHH
Confidence 355688884 9999999999999986
No 119
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.53 E-value=0.85 Score=27.28 Aligned_cols=25 Identities=20% Similarity=0.389 Sum_probs=20.9
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.. |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2epw_A 9 GEKPCKCTE---------CGKAFCWKSQLIMHQR 33 (46)
T ss_dssp CCCSEECSS---------SCCEESSSHHHHHHHH
T ss_pred CCCCeeCCC---------CCCccCCHHHHHHHHH
Confidence 345588873 9999999999999987
No 120
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=83.29 E-value=0.79 Score=27.65 Aligned_cols=25 Identities=20% Similarity=0.441 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2emj_A 9 GEKPFECAE---------CGKSFSISSQLATHQR 33 (46)
T ss_dssp CCCSEECSS---------SSCEESSHHHHHHHHH
T ss_pred CCCCEECCC---------CCcccCCHHHHHHHHH
Confidence 345688884 9999999999999987
No 121
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.26 E-value=0.9 Score=27.29 Aligned_cols=25 Identities=12% Similarity=0.389 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ep2_A 9 GEKPYECSI---------CGKSFTKKSQLHVHQQ 33 (46)
T ss_dssp CCCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCcCcCCCC---------CCcccCCHHHHHHHHH
Confidence 355688883 9999999999999987
No 122
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.20 E-value=0.93 Score=27.34 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2em5_A 9 STKSHQCHE---------CGRGFTLKSHLNQHQR 33 (46)
T ss_dssp CSCSEECSS---------SCCEESSHHHHHHHHT
T ss_pred CCCCeECCc---------CCCccCCHHHHHHHHH
Confidence 345688884 9999999999999986
No 123
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.18 E-value=0.92 Score=27.25 Aligned_cols=25 Identities=12% Similarity=0.488 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.. |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ep3_A 9 GEKPYRCAE---------CGKAFTDRSNLFTHQK 33 (46)
T ss_dssp CCCSEECSS---------SCCEESSHHHHHHHHT
T ss_pred CCCCeECCC---------CCchhCCHHHHHHHHH
Confidence 355688884 9999999999999986
No 124
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.17 E-value=0.84 Score=27.31 Aligned_cols=25 Identities=12% Similarity=0.371 Sum_probs=21.4
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2eow_A 9 GEKPYKCNE---------CGKAFRARSSLAIHQA 33 (46)
T ss_dssp CCCCEECTT---------SCCEESSHHHHHHHHH
T ss_pred CCCCeeccc---------cCChhcCHHHHHHHHH
Confidence 455688884 9999999999999987
No 125
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=83.73 E-value=0.23 Score=26.38 Aligned_cols=17 Identities=18% Similarity=0.417 Sum_probs=15.4
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 7 ~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 7 RCGKRFVQSSQLANHIR 23 (26)
Confidence 49999999999999976
No 126
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.11 E-value=0.81 Score=27.61 Aligned_cols=25 Identities=16% Similarity=0.478 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2em4_A 9 GQRPYECIE---------CGKAFKTKSSLICHRR 33 (46)
T ss_dssp CSSSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCcCcCCCC---------CCCccCCHHHHHHHHH
Confidence 345688874 9999999999999987
No 127
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.05 E-value=0.86 Score=27.49 Aligned_cols=25 Identities=20% Similarity=0.388 Sum_probs=20.9
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2em2_A 9 GEKPFKCKE---------CGKAFRQNIHLASHLR 33 (46)
T ss_dssp CCCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCEECCc---------CCchhCCHHHHHHHHH
Confidence 345688873 9999999999999987
No 128
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.01 E-value=0.82 Score=27.46 Aligned_cols=25 Identities=16% Similarity=0.389 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ytk_A 9 GEKPYKCNE---------CGKVFTQNSHLTNHWR 33 (46)
T ss_dssp SSCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCEeCCc---------CCCccCCHHHHHHHHH
Confidence 355688873 9999999999999987
No 129
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=82.91 E-value=0.77 Score=31.27 Aligned_cols=27 Identities=26% Similarity=0.503 Sum_probs=19.8
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
...+|.|. .+.|.++|.++..|+.|++
T Consensus 12 ~~~~~~C~-------~~~C~~~f~~~~~l~~H~~ 38 (100)
T 2ebt_A 12 KRRIHYCD-------YPGCTKVYTKSSHLKAHLR 38 (100)
T ss_dssp SCCCEECC-------SSSCCCEESCHHHHHHHHH
T ss_pred cCcceEcC-------CCCCCCcccCHHHHHHHHH
Confidence 45577887 3677777777777777776
No 130
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.73 E-value=1.1 Score=26.84 Aligned_cols=24 Identities=17% Similarity=0.486 Sum_probs=20.6
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2eme_A 10 EKPYVCDY---------CGKAFGLSAELVRHQR 33 (46)
T ss_dssp CCSEECSS---------SCCEESSHHHHHHHHG
T ss_pred CCCeECCC---------CChhhCCHHHHHHHHH
Confidence 45688883 9999999999999986
No 131
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.70 E-value=0.83 Score=27.45 Aligned_cols=25 Identities=16% Similarity=0.345 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2emp_A 9 GVKPYMCNE---------CGKAFSVYSSLTTHQV 33 (46)
T ss_dssp CCCSEECSS---------SCCEESCHHHHHHHHH
T ss_pred CCcCeECCC---------CCchhCCHHHHHHHHH
Confidence 355688884 9999999999999987
No 132
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.68 E-value=0.8 Score=27.41 Aligned_cols=25 Identities=16% Similarity=0.476 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2eor_A 9 GEKPYNCEE---------CGKAFIHDSQLQEHQR 33 (46)
T ss_dssp CCCSEECTT---------TCCEESSHHHHHHHHH
T ss_pred CCcCccCCC---------CCCCcCCHHHHHHHHH
Confidence 345688874 9999999999999987
No 133
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=82.67 E-value=1.1 Score=26.82 Aligned_cols=25 Identities=16% Similarity=0.359 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2em9_A 9 GEKPYNCKE---------CGKSFRWASCLLKHQR 33 (46)
T ss_dssp CCCSEECSS---------SCCEESSHHHHHHHGG
T ss_pred CCcCeECCc---------cccccCChHHHHHHHH
Confidence 345688874 9999999999999986
No 134
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.65 E-value=0.99 Score=26.62 Aligned_cols=25 Identities=20% Similarity=0.563 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (44)
T 2eof_A 9 GEKPYECNE---------CQKAFNTKSNLMVHQR 33 (44)
T ss_dssp CCCSEECTT---------TCCEESCHHHHHHHHH
T ss_pred CCCCeECCC---------CCcccCCHhHHHHHHH
Confidence 355688884 9999999999999986
No 135
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=82.56 E-value=0.66 Score=28.70 Aligned_cols=27 Identities=19% Similarity=0.453 Sum_probs=23.8
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|. .+.|.++|.+...|+.|+.
T Consensus 15 ~~k~~~C~-------~~~C~k~F~~~~~L~~H~~ 41 (47)
T 1ncs_A 15 PDKTFECL-------FPGCTKTFKRRYNIRSHIQ 41 (47)
T ss_dssp TTTEEECC-------CTTCCCEECSSSSHHHHHH
T ss_pred CCCCeECC-------CCCCCCccCCHHHHHHHHH
Confidence 56789998 3789999999999999986
No 136
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=82.49 E-value=1.1 Score=27.07 Aligned_cols=25 Identities=16% Similarity=0.493 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2el6_A 9 GVNPYKCSQ---------CEKSFSGKLRLLVHQR 33 (46)
T ss_dssp CCCSEECSS---------SSCEESSHHHHHHHHG
T ss_pred CCCCeECCC---------CCcccCCHHHHHHHHH
Confidence 345688884 9999999999999977
No 137
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.46 E-value=0.89 Score=27.05 Aligned_cols=25 Identities=20% Similarity=0.448 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 7 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 31 (44)
T 2emx_A 7 GEKPFGCSC---------CEKAFSSKSYLLVHQQ 31 (44)
T ss_dssp SCCCEECSS---------SSCEESSHHHHHHHHH
T ss_pred CCcCccCCC---------CCcccCCHHHHHHHHH
Confidence 345688874 9999999999999987
No 138
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.43 E-value=1 Score=27.05 Aligned_cols=24 Identities=17% Similarity=0.502 Sum_probs=20.5
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+..+|+.|++
T Consensus 10 ~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2enc_A 10 EKPFKCEE---------CGKGFYTNSQCYSHQR 33 (46)
T ss_dssp CCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCcCCCC---------CCCcCCChHHHHHHHH
Confidence 44588874 9999999999999987
No 139
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.35 E-value=0.97 Score=27.02 Aligned_cols=25 Identities=16% Similarity=0.461 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2emm_A 9 GERPHKCNE---------CGKSFIQSAHLIQHQR 33 (46)
T ss_dssp CCCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCeeCCC---------CChhhCCHHHHHHHHH
Confidence 345688874 9999999999999987
No 140
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=83.08 E-value=0.26 Score=26.46 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=15.4
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 8 ~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 8 HCQRQFADPGALQRHVR 24 (30)
Confidence 49999999999999986
No 141
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.11 E-value=0.82 Score=25.75 Aligned_cols=24 Identities=21% Similarity=0.422 Sum_probs=20.5
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+...|+.|+.
T Consensus 7 ~k~~~C~~---------C~k~f~~~~~l~~H~~ 30 (36)
T 2elt_A 7 GKPYKCPQ---------CSYASAIKANLNVHLR 30 (36)
T ss_dssp CCSEECSS---------SSCEESSHHHHHHHHH
T ss_pred CCCCCCCC---------CCcccCCHHHHHHHHH
Confidence 45688874 9999999999999986
No 142
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.08 E-value=1.1 Score=31.62 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=22.7
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+..|.|. .|.++|.+..+|+.|++-.|
T Consensus 77 ~~~~~~C~---------~C~k~f~~~~~L~~H~~~hh 104 (115)
T 2dmi_A 77 AQKVLKCM---------YCGHSFESLQDLSVHMIKTK 104 (115)
T ss_dssp CCSSCBCS---------SSCCBCSSHHHHHHHHHHTT
T ss_pred CCcceECC---------CCCCccCCHHHHHHHHHHhC
Confidence 35667887 39999999999999998444
No 143
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=81.78 E-value=0.83 Score=29.97 Aligned_cols=27 Identities=15% Similarity=0.396 Sum_probs=22.7
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+..|.|. ..+|.++|.++.+|+.|++
T Consensus 28 ~~~~~~C~-------~~~C~~~f~~~~~l~~H~~ 54 (85)
T 2j7j_A 28 QQLPYECP-------HEGCDKRFSLPSRLKRHEK 54 (85)
T ss_dssp TTCCEECC-------STTCCCEESSHHHHHHHHH
T ss_pred CCCCeeCC-------CCCCcCccCCHHHHHHHHH
Confidence 45679998 4789999999999999986
No 144
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.73 E-value=1.1 Score=26.64 Aligned_cols=25 Identities=24% Similarity=0.531 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+...|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (44)
T 2yu5_A 9 GENPFKCSK---------CDRVFTQRNYLVQHER 33 (44)
T ss_dssp CCCSEECSS---------SSCEESSSHHHHHHHH
T ss_pred CCCCeECCC---------CCchhCCHHHHHHHhH
Confidence 345688884 9999999999999987
No 145
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.61 E-value=1.1 Score=26.90 Aligned_cols=25 Identities=24% Similarity=0.404 Sum_probs=21.4
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2en6_A 9 GEKPYGCNE---------CGKTFSQKSILSAHQR 33 (46)
T ss_dssp SSCCEEETT---------TTEEESSHHHHHHHHH
T ss_pred CCcCeECCC---------CCcccCchHHHHHHHH
Confidence 456688884 9999999999999987
No 146
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.52 E-value=0.83 Score=27.08 Aligned_cols=24 Identities=13% Similarity=0.513 Sum_probs=20.4
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (44)
T 2eoj_A 10 ENPYECCE---------CGKVFSRKDQLVSHQK 33 (44)
T ss_dssp CCSCEETT---------TTEECSSHHHHHHHHT
T ss_pred CcCeeCCC---------CCCccCCHHHHHHHHH
Confidence 45688874 9999999999999987
No 147
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.41 E-value=0.81 Score=27.50 Aligned_cols=25 Identities=24% Similarity=0.454 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ytg_A 9 GEKPFKCGE---------CGKSYNQRVHLTQHQR 33 (46)
T ss_dssp SCCSEECTT---------TCCEESSSHHHHTTGG
T ss_pred CCCCeECCC---------CCcccCCHHHHHHHHH
Confidence 355688874 9999999999999986
No 148
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.34 E-value=0.91 Score=25.77 Aligned_cols=24 Identities=29% Similarity=0.653 Sum_probs=20.6
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+..|.|.. |.+.|.+...|+.|+.
T Consensus 7 ~k~~~C~~---------C~k~f~~~~~l~~H~~ 30 (36)
T 2els_A 7 GKIFTCEY---------CNKVFKFKHSLQAHLR 30 (36)
T ss_dssp CCCEECTT---------TCCEESSHHHHHHHHH
T ss_pred CCCEECCC---------CCceeCCHHHHHHHHH
Confidence 45688873 9999999999999987
No 149
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.30 E-value=0.87 Score=29.94 Aligned_cols=26 Identities=19% Similarity=0.428 Sum_probs=22.4
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+..|.|. .+.|.++|.+..+|+.|++
T Consensus 5 ~~~~~C~-------~~~C~~~f~~~~~L~~H~~ 30 (79)
T 2dlk_A 5 SSGMPCD-------FPGCGRIFSNRQYLNHHKK 30 (79)
T ss_dssp CSSEECS-------STTTCCEESSHHHHHHHHH
T ss_pred CCCccCC-------CCCCcCccCCHHHHHHHHH
Confidence 4568899 5899999999999999964
No 150
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=81.30 E-value=0.81 Score=34.81 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=26.5
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh--ccCCCC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR--HLGPHP 186 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn--H~h~~p 186 (282)
.+.=|.|.+ ++|.|+|..+.+|+.|++ |-...|
T Consensus 24 GEKPYkC~~-------~~CgKaFsr~s~L~~H~rriHTgEKP 58 (73)
T 1x3c_A 24 PYRPYRCVH-------QGCFAAFTIQQNLILHYQAVHKSDLP 58 (73)
T ss_dssp SSCSCBCCS-------TTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred CCCCeECCC-------CCcChhHcCHHHHHHHhhhhCCCCCC
Confidence 466789995 899999999999999974 555344
No 151
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.16 E-value=1.1 Score=26.86 Aligned_cols=25 Identities=16% Similarity=0.426 Sum_probs=20.9
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2ytd_A 9 GEKPYKCSE---------CGKAFHRHTHLNEHRR 33 (46)
T ss_dssp CCCSEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCcCeECCC---------CCCeeCChHHHHHHHH
Confidence 345688873 9999999999999976
No 152
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.11 E-value=0.84 Score=26.79 Aligned_cols=25 Identities=16% Similarity=0.271 Sum_probs=20.9
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 8 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 32 (42)
T 2en2_A 8 GEKPYKCET---------CGARFVQVAHLRAHVL 32 (42)
T ss_dssp SSCSEECTT---------TCCEESSHHHHHHHTH
T ss_pred CCCCEeCCC---------cChhhCCHHHHHHHHH
Confidence 345688874 9999999999999986
No 153
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=81.03 E-value=0.94 Score=29.55 Aligned_cols=27 Identities=19% Similarity=0.394 Sum_probs=23.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|. ...|.++|.+..+|+.|++
T Consensus 16 ~~~~~~C~-------~~~C~k~f~~~~~l~~H~~ 42 (73)
T 1f2i_G 16 KMRPYACP-------VESCDRRFSRSDELTRHIR 42 (73)
T ss_dssp CCCCEECS-------STTBCCEESSHHHHHHHHH
T ss_pred CCCccCCc-------CCCCCCccCCHHHHHHHHH
Confidence 45569998 4789999999999999987
No 154
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.00 E-value=0.89 Score=25.97 Aligned_cols=24 Identities=21% Similarity=0.426 Sum_probs=20.1
Q ss_pred CcEEEcccCCccccCccccccccCh-HhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQ-RDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQ-RDLQAHIn 180 (282)
+.-|.|.. |.++|.+. .+|+.|+.
T Consensus 7 ~k~~~C~~---------C~k~f~~~~~~L~~H~~ 31 (37)
T 2elp_A 7 GRAMKCPY---------CDFYFMKNGSDLQRHIW 31 (37)
T ss_dssp CCCEECSS---------SSCEECSSCHHHHHHHH
T ss_pred CCCeECCC---------CChhhccCHHHHHHHHH
Confidence 45588874 99999999 99999986
No 155
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.94 E-value=1.2 Score=26.58 Aligned_cols=25 Identities=16% Similarity=0.285 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.. |.++|.+..+|+.|+.
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2en8_A 9 GEKSHTCDE---------CGKNFCYISALRIHQR 33 (46)
T ss_dssp CCSSEECTT---------TCCEESSHHHHHHHHT
T ss_pred CCCCeECCC---------cCcccCCHHHHHHHHH
Confidence 355688874 9999999999999986
No 156
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.86 E-value=0.96 Score=25.67 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=20.4
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.. |.++|.+..+|+.|+.
T Consensus 7 ~k~~~C~~---------C~k~f~~~~~l~~H~~ 30 (36)
T 2elv_A 7 GLLYDCHI---------CERKFKNELDRDRHML 30 (36)
T ss_dssp CCCEECSS---------SCCEESSHHHHHHHHT
T ss_pred CCCeECCC---------CCCccCCHHHHHHHHH
Confidence 45688874 9999999999999986
No 157
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=80.45 E-value=1 Score=27.86 Aligned_cols=25 Identities=16% Similarity=0.327 Sum_probs=21.4
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.. |.++|.+..+|+.|++
T Consensus 26 ~~~~~~C~~---------C~~~f~~~~~l~~H~~ 50 (57)
T 1bbo_A 26 DVRPYHCTY---------CNFSFKTKGNLTKHMK 50 (57)
T ss_dssp SCCCEECSS---------SSCEESSHHHHHHHHH
T ss_pred CCCCccCCC---------CCchhcCHHHHHHHHH
Confidence 355688884 9999999999999987
No 158
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=80.44 E-value=0.93 Score=30.27 Aligned_cols=18 Identities=22% Similarity=0.388 Sum_probs=11.1
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
..|.++|.+..+|+.|++
T Consensus 10 ~~C~~~f~~~~~l~~H~~ 27 (90)
T 1a1h_A 10 ESCDRRFSQSGSLTRHIR 27 (90)
T ss_dssp SSCCCEESSHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHH
Confidence 456666666666666655
No 159
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.27 E-value=1.3 Score=26.70 Aligned_cols=25 Identities=24% Similarity=0.557 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+...|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2eoy_A 9 KEKCFKCNK---------CEKTFSCSKYLTQHER 33 (46)
T ss_dssp CSCCEECSS---------SCCEESSSHHHHHHHT
T ss_pred CCCCEECcC---------CCCcCCCHHHHHHHHH
Confidence 345688884 9999999999999986
No 160
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=80.26 E-value=1.2 Score=29.57 Aligned_cols=26 Identities=27% Similarity=0.443 Sum_probs=22.4
Q ss_pred cEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 149 TVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 149 sVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
..|.|.+ |.++|.+..+|+.|++-.|
T Consensus 44 ~~~~C~~---------C~~~f~~~~~L~~H~~~~H 69 (77)
T 2ct1_A 44 AKFHCPH---------CDTVIARKSDLGVHLRKQH 69 (77)
T ss_dssp SSEECSS---------SSCEESSHHHHHHHHHHTS
T ss_pred CccCCCC---------CCCccCCHHHHHHHHHHhC
Confidence 4689984 9999999999999998666
No 161
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=80.01 E-value=0.47 Score=38.31 Aligned_cols=56 Identities=20% Similarity=0.508 Sum_probs=44.1
Q ss_pred cceecccCCCceEEEEeecccccccccccccCCCCCCccCCCccceeeeeEecCCcEEEccc
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVTRVEPTGLGTVFMCTH 155 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~rIEq~~lgsVFMCt~ 155 (282)
|...|++|.-++.-.|. +.+|-.|...-+....||-|.++++.+..++--+ |.|.+
T Consensus 31 M~~~CP~Cq~eL~~~g~-----~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvd-YFC~~ 86 (101)
T 2jne_A 31 MELHCPQCQHVLDQDNG-----HARCRSCGEFIEMKALCPDCHQPLQVLKACGAVD-YFCQH 86 (101)
T ss_dssp CCCBCSSSCSBEEEETT-----EEEETTTCCEEEEEEECTTTCSBCEEEEETTEEE-EEETT
T ss_pred ccccCccCCCcceecCC-----EEECccccchhhccccCcchhhHHHHHHHhcCcc-hhhcc
Confidence 56799999999887664 5569999886445678999999999999887433 55765
No 162
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=79.97 E-value=1.1 Score=28.21 Aligned_cols=28 Identities=14% Similarity=0.383 Sum_probs=23.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+.-|.|.. |.++|.+..+|+.|++-.|
T Consensus 27 ~~~~~~C~~---------C~~~f~~~~~l~~H~~~~H 54 (60)
T 2adr_A 27 NEKPYPCGL---------CNRAFTRRDLLIRHAQKIH 54 (60)
T ss_dssp SSCSEECTT---------TCCEESSHHHHHHHHTTTS
T ss_pred CCCCccCCC---------CCCccCCHHHHHHHHHHHc
Confidence 355688884 9999999999999987566
No 163
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=81.05 E-value=0.36 Score=26.04 Aligned_cols=17 Identities=24% Similarity=0.446 Sum_probs=15.4
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 7 ~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 7 MCGKAFTQASSLIAHVR 23 (29)
Confidence 49999999999999976
No 164
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.45 E-value=1.2 Score=25.78 Aligned_cols=24 Identities=17% Similarity=0.483 Sum_probs=20.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALG 179 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHI 179 (282)
.+.-|.|.. |.++|.+..+|+.|+
T Consensus 6 ~~k~~~C~~---------C~k~f~~~~~L~~H~ 29 (37)
T 2elm_A 6 SGHLYYCSQ---------CHYSSITKNCLKRHV 29 (37)
T ss_dssp SSCEEECSS---------SSCEEECHHHHHHHH
T ss_pred CCcCeECCC---------CCcccCCHHHHHHHH
Confidence 345688874 999999999999993
No 165
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=79.44 E-value=1.2 Score=29.07 Aligned_cols=28 Identities=14% Similarity=0.231 Sum_probs=22.4
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+..|.|.+ |.++|.+..+|+.|++-.|
T Consensus 34 ~~~~~~C~~---------C~~~f~~~~~L~~H~~~h~ 61 (70)
T 1x5w_A 34 TDRPFKCNY---------CSFDTKQPSNLSKHMKKFH 61 (70)
T ss_dssp CSCSEECSS---------SSCEESSHHHHHHHHHHHH
T ss_pred CCCCEeCCC---------CCCccCCHHHHHHHHHHHh
Confidence 345689984 9999999999999987433
No 166
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.20 E-value=1.8 Score=25.18 Aligned_cols=24 Identities=21% Similarity=0.549 Sum_probs=19.8
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 8 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 31 (42)
T 2yte_A 8 EKPYSCA---------ECKETFSDNNRLVQHQK 31 (42)
T ss_dssp CCSCBCT---------TTCCBCSSHHHHHHHHH
T ss_pred CCCeECC---------CCCCccCCHHHHHHHHH
Confidence 3446676 49999999999999987
No 167
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.11 E-value=1.3 Score=25.16 Aligned_cols=24 Identities=17% Similarity=0.527 Sum_probs=20.1
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 7 ~k~~~C~---------~C~k~f~~~~~l~~H~~ 30 (37)
T 2elo_A 7 GRSYSCP---------VCEKSFSEDRLIKSHIK 30 (37)
T ss_dssp CCCCEET---------TTTEECSSHHHHHHHHH
T ss_pred CCCcCCC---------CCCCccCCHHHHHHHHH
Confidence 4457777 39999999999999987
No 168
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.11 E-value=0.95 Score=26.94 Aligned_cols=25 Identities=12% Similarity=0.348 Sum_probs=21.4
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~~~~~C~~---------C~k~F~~~~~L~~H~~ 33 (44)
T 2eox_A 9 DSKSYNCNE---------CGKAFTRIFHLTRHQK 33 (44)
T ss_dssp CCCCEEETT---------TTEEESSSHHHHTTHH
T ss_pred CCCCeECcc---------cCcccCCHHHHHHHHH
Confidence 356688884 9999999999999987
No 169
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=79.02 E-value=1.3 Score=29.14 Aligned_cols=24 Identities=17% Similarity=0.400 Sum_probs=20.7
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+..+|+.|++
T Consensus 43 ~~~~~C~~---------C~k~f~~~~~L~~H~~ 66 (74)
T 2lce_A 43 EKPYRCNI---------CGAQFNRPANLKTHTR 66 (74)
T ss_dssp CCSEECTT---------TCCEESCHHHHHHHHH
T ss_pred CCCEECCC---------CCchhCCHHHHHHHHH
Confidence 45689984 9999999999999987
No 170
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.69 E-value=0.15 Score=32.83 Aligned_cols=24 Identities=17% Similarity=0.279 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 37 ~~~~~C~---------~C~~~f~~~~~l~~H~~ 60 (73)
T 2ctu_A 37 RKTPMCE---------KCRKDSCQEAALNKDEG 60 (73)
T ss_dssp SSSCCCH---------HHHHTCSCCCSSCCCSS
T ss_pred CCCCCCC---------CCChhhcCHHHHHHHHH
Confidence 4557777 49999999999999976
No 171
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=78.54 E-value=1.2 Score=29.13 Aligned_cols=23 Identities=13% Similarity=0.463 Sum_probs=20.4
Q ss_pred EEcccCCccccCccccccccChHhHHHHhh
Q psy6453 151 FMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 151 FMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
|.|. ...|.++|.++..|+.|++
T Consensus 2 ~~C~-------~~~C~~~f~~~~~l~~H~~ 24 (85)
T 2j7j_A 2 YVCH-------FENCGKAFKKHNQLKVHQF 24 (85)
T ss_dssp EECC-------STTCCCEESSHHHHHHHHH
T ss_pred ccCC-------CCCCCcccCCHHHHHHHHH
Confidence 6786 4789999999999999987
No 172
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=78.08 E-value=1.9 Score=27.16 Aligned_cols=28 Identities=14% Similarity=0.483 Sum_probs=22.4
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+..|.|.+ |.++|.+..+|+.|++..|
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~~~H 36 (54)
T 2eps_A 9 VGKPYICQS---------CGKGFSRPDHLNGHIKQVH 36 (54)
T ss_dssp SSCCEECSS---------SCCEESSHHHHHHHHHHTS
T ss_pred CCCCeECCC---------CCcccCCHHHHHHHHHHhc
Confidence 345688874 9999999999999987445
No 173
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=77.85 E-value=1.7 Score=28.59 Aligned_cols=41 Identities=20% Similarity=0.533 Sum_probs=24.9
Q ss_pred ccCCCccceeeeeEe------c-CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 131 TCLRCGEGVTRVEPT------G-LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 131 ~CprC~d~V~rIEq~------~-lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.|..|.....+...+ + .+.-|.|.+ |.++|.+..+|+.|++
T Consensus 16 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~---------C~~~f~~~~~L~~H~~ 63 (72)
T 1x6e_A 16 GCVECGKAFSRSSILVQHQRVHTGEKPYKCLE---------CGKAFSQNSGLINHQR 63 (72)
T ss_dssp ECSSSCCEESSHHHHHHHHHGGGCSCCEECSS---------SCCEESSHHHHHHHHH
T ss_pred cCCCCCCccCCHHHHHHHHHhcCCCCCeECCC---------CCcccCCHHHHHHHHH
Confidence 466776654432221 2 355677763 7777777777777776
No 174
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=77.77 E-value=1.5 Score=27.57 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=21.6
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+...|+.|+.
T Consensus 21 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 45 (54)
T 1yui_A 21 SEQPATCPI---------CYAVIRQSRNLRRHLE 45 (54)
T ss_dssp SSCCEECTT---------TCCEESSHHHHHHHHH
T ss_pred CCCCccCCC---------CCcccCCHHHHHHHHH
Confidence 456789984 9999999999999987
No 175
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=77.71 E-value=1.2 Score=32.61 Aligned_cols=30 Identities=17% Similarity=0.435 Sum_probs=23.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+..|.|. .++|.++|.+..+|+.|++-.|
T Consensus 125 ~~~~~~C~-------~~~C~~~f~~~~~L~~H~~~hh 154 (155)
T 2gli_A 125 NEKPYVCK-------LPGCTKRYTDPSSLRKHVKTVH 154 (155)
T ss_dssp SCCCEECC-------STTTCCEESSHHHHHHHHHHSC
T ss_pred CCCCeeCC-------CCCCccccCCHHHHHHHHHhhc
Confidence 35568888 4788899999999999887443
No 176
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.71 E-value=2.4 Score=25.44 Aligned_cols=24 Identities=21% Similarity=0.458 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~F~~~~~L~~H~~ 33 (46)
T 2elz_A 10 EKPYKCE---------DCGKGYNRRLNLDMHQR 33 (46)
T ss_dssp CSSCBCS---------SSCCBCSSHHHHHHHGG
T ss_pred CCCeeCc---------ccCchhCCHHHHHHHHH
Confidence 4456676 49999999999999987
No 177
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=77.48 E-value=1.5 Score=30.77 Aligned_cols=45 Identities=22% Similarity=0.408 Sum_probs=30.7
Q ss_pred CccCCCccceeeeeEe------c-CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 130 PTCLRCGEGVTRVEPT------G-LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 130 k~CprC~d~V~rIEq~------~-lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
-.|..|.....+...+ . .+..|.|.+ |.++|.+..+|+.|+.-.|
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---------C~~~f~~~~~l~~H~~~~H 118 (124)
T 2dlq_A 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSS---------CSQQFMQKKDLQSHMIKLH 118 (124)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHSSSCSEECSS---------SCCEESSHHHHHHHHHHTS
T ss_pred eECCCCCCccCCHHHHHHHHHHcCCCCCccCCC---------ccchhCCHHHHHHHHHHHC
Confidence 3477776654433222 2 345577873 9999999999999998666
No 178
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.45 E-value=1.9 Score=28.54 Aligned_cols=27 Identities=15% Similarity=0.321 Sum_probs=23.2
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
+.-|.|.+ |.++|.+...|+.|++-.|
T Consensus 36 ~~~~~C~~---------C~k~f~~~~~L~~H~~~~H 62 (78)
T 2d9h_A 36 ALRFPCEF---------CGKRFEKPDSVAAHRSKSH 62 (78)
T ss_dssp TCCEECTT---------TCCEESSHHHHHHHHHHTS
T ss_pred CcccCCCC---------CCchhCCHHHHHHHHHHhC
Confidence 46799984 9999999999999997666
No 179
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=77.22 E-value=1.3 Score=27.47 Aligned_cols=18 Identities=17% Similarity=0.038 Sum_probs=16.3
Q ss_pred cccccccChHhHHHHhhc
Q psy6453 164 GCKRTYLSQRDLMALGRH 181 (282)
Q Consensus 164 gCkRTYLSQRDLQAHInH 181 (282)
.|.++|.+..+|+.|++.
T Consensus 6 ~C~~~f~~~~~l~~H~~~ 23 (57)
T 1bbo_A 6 ECGIRXKKPSMLKKHIRT 23 (57)
T ss_dssp TTCCBCSSHHHHHHHHHH
T ss_pred CCcCcCCCHHHHHHHHHh
Confidence 599999999999999873
No 180
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.96 E-value=1.4 Score=26.46 Aligned_cols=25 Identities=20% Similarity=0.296 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2en3_A 9 GEKPFQCKE---------CGMNFSWSCSLFKHLR 33 (46)
T ss_dssp CCCSEECSS---------SCCEESSSHHHHHHHH
T ss_pred CCCCeeCcc---------cChhhCCHHHHHHHHH
Confidence 355688884 9999999999999986
No 181
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.95 E-value=1.4 Score=26.54 Aligned_cols=25 Identities=16% Similarity=0.339 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2eoz_A 9 GEKPYSCNV---------CGKAFVLSAHLNQHLR 33 (46)
T ss_dssp SCCSEEETT---------TTEEESSHHHHHHHHH
T ss_pred CCCCeECcc---------cChhhCCHHHHHHHHH
Confidence 355688884 9999999999999987
No 182
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.94 E-value=1.4 Score=26.48 Aligned_cols=25 Identities=12% Similarity=0.337 Sum_probs=21.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2eoo_A 9 GERPYGCNE---------CGKNFGRHSHLIEHLK 33 (46)
T ss_dssp CCCCEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCEEccc---------cCcccCCHHHHHHHHH
Confidence 355688884 9999999999999986
No 183
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=76.93 E-value=1.2 Score=27.92 Aligned_cols=18 Identities=28% Similarity=0.397 Sum_probs=16.3
Q ss_pred cccccccChHhHHHHhhc
Q psy6453 164 GCKRTYLSQRDLMALGRH 181 (282)
Q Consensus 164 gCkRTYLSQRDLQAHInH 181 (282)
.|.++|.+..+|+.|++-
T Consensus 7 ~C~~~f~~~~~l~~H~~~ 24 (60)
T 2adr_A 7 VCTRAFARQEHLKRHYRS 24 (60)
T ss_dssp TTCCCBSCHHHHHHHHHT
T ss_pred CCccccCCHHHHHHHHHH
Confidence 599999999999999873
No 184
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.76 E-value=1.4 Score=26.36 Aligned_cols=25 Identities=16% Similarity=0.531 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~F~~~~~L~~H~~ 33 (46)
T 2emh_A 9 GERPYICTV---------CGKAFTDRSNLIKHQK 33 (46)
T ss_dssp CCCSEECTT---------TCCEESSHHHHHHHHH
T ss_pred CCCCcCCCC---------CCchhCCHHHHHHHHH
Confidence 355688884 9999999999999987
No 185
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=76.76 E-value=1.4 Score=28.76 Aligned_cols=27 Identities=26% Similarity=0.516 Sum_probs=23.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|. ...|.++|.+..+|+.|++
T Consensus 44 ~~~~~~C~-------~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 44 GEKPFSCS-------WKGCERRFARSDELSRHRR 70 (72)
T ss_dssp SSCSEECC-------CTTCCCEESSHHHHHHHTT
T ss_pred CCCCccCC-------CCCCCcccCCHHHHHhHhh
Confidence 45679998 4789999999999999975
No 186
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.68 E-value=1.3 Score=26.51 Aligned_cols=25 Identities=16% Similarity=0.424 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.. |.++|.+..+|+.|++
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2yu8_A 9 GEKPYKCNE---------CGKVFTQNSHLARHRR 33 (46)
T ss_dssp CCSSEECSS---------SCCEESSSHHHHHHTH
T ss_pred CCCCeECCc---------CCchhCCHHHHHHHHH
Confidence 355688873 9999999999999986
No 187
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.61 E-value=2.6 Score=25.14 Aligned_cols=24 Identities=13% Similarity=0.403 Sum_probs=20.0
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.++.+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~F~~~~~L~~H~~ 33 (46)
T 2ytn_A 10 KKPYKCN---------ECGKVFTQNSHLARHRG 33 (46)
T ss_dssp CSSCBCT---------TTCCBCSSHHHHHHHGG
T ss_pred CcCeECC---------CCCCeeCCHHHHHHHhh
Confidence 4457776 49999999999999976
No 188
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=76.61 E-value=1.5 Score=30.06 Aligned_cols=25 Identities=12% Similarity=0.183 Sum_probs=19.5
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|....+|..|++
T Consensus 29 ~ekp~~C~~---------C~k~F~~~~~L~~H~~ 53 (60)
T 4gzn_C 29 GYRPRSCPE---------CGKCFRDQSEVNRHLK 53 (60)
T ss_dssp TCCCEECTT---------TCCEESSHHHHHHHGG
T ss_pred CCcCeECCC---------CCCCcCCHHHHHHHhC
Confidence 456777774 8888888888888876
No 189
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=76.55 E-value=1.9 Score=28.11 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=21.1
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhhc
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRH 181 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH 181 (282)
+..|.|.+ |.++|.+..+|+.|++-
T Consensus 7 ~~~~~C~~---------C~k~f~~~~~L~~H~~~ 31 (70)
T 1x5w_A 7 GHPEKCSE---------CSYSCSSKAALRIHERI 31 (70)
T ss_dssp CCSEECSS---------SSCEESSHHHHHHHHGG
T ss_pred CCCeECCC---------CCcccCCHHHHHHHHHH
Confidence 45688873 99999999999999874
No 190
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.47 E-value=1.9 Score=24.15 Aligned_cols=24 Identities=21% Similarity=0.484 Sum_probs=19.7
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+..|.|. .|.++|.+..+|+.|..
T Consensus 7 ~~~~~C~---------~C~k~f~~~~~l~~H~~ 30 (36)
T 2elr_A 7 GKTHLCD---------MCGKKFKSKGTLKSHKL 30 (36)
T ss_dssp CSSCBCT---------TTCCBCSSHHHHHHHHH
T ss_pred CCCeecC---------cCCCCcCchHHHHHHHH
Confidence 3456676 49999999999999986
No 191
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.43 E-value=1.5 Score=26.38 Aligned_cols=25 Identities=12% Similarity=0.393 Sum_probs=21.4
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2yto_A 9 GEKPYKCSD---------CGKAFTRKSGLHIHQQ 33 (46)
T ss_dssp SCCCEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCEECcc---------cCCccCCHhHHHHHHH
Confidence 455688884 9999999999999986
No 192
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.31 E-value=2.6 Score=25.18 Aligned_cols=24 Identities=21% Similarity=0.582 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq2_A 10 GKPYQCN---------ECGKAFSQTSKLARHQR 33 (46)
T ss_dssp SCSSSCC---------SSCCCCSSHHHHHHHGG
T ss_pred CCCeECC---------CCCcccCCHHHHHHHHH
Confidence 4456676 49999999999999986
No 193
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.27 E-value=2.3 Score=24.89 Aligned_cols=24 Identities=17% Similarity=0.304 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 9 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 32 (42)
T 2eos_A 9 EKPYPCE---------ICGTRFRHLQTLKSHLR 32 (42)
T ss_dssp SCCBCCS---------SSCCCBSSHHHHHHHTT
T ss_pred CCCEECC---------CCCCccCCHHHHHHHHH
Confidence 4456676 49999999999999987
No 194
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=76.25 E-value=2 Score=24.31 Aligned_cols=18 Identities=17% Similarity=0.438 Sum_probs=16.0
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
+.|.++|.+..+|+.|..
T Consensus 15 ~~C~k~f~~~~~l~~H~~ 32 (37)
T 1p7a_A 15 PDCDRSFSRSDHLALHRK 32 (37)
T ss_dssp TTTCCCBSSHHHHHHHHG
T ss_pred CCCCcccCcHHHHHHHHH
Confidence 359999999999999976
No 195
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=76.01 E-value=1.8 Score=22.63 Aligned_cols=17 Identities=24% Similarity=0.518 Sum_probs=15.7
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|++
T Consensus 6 ~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 6 LCERSFVEKSALSRHQR 22 (27)
T ss_dssp SSCCBCSSHHHHHHHGG
T ss_pred CCCCcCCCHHHHHHHHH
Confidence 49999999999999986
No 196
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=75.99 E-value=1.4 Score=28.20 Aligned_cols=28 Identities=14% Similarity=0.364 Sum_probs=23.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+.-|.|.. |.++|.+..+|+.|++-.|
T Consensus 37 ~~~~~~C~~---------C~k~f~~~~~L~~H~~~~H 64 (66)
T 2drp_A 37 NVKVYPCPF---------CFKEFTRKDNMTAHVKIIH 64 (66)
T ss_dssp SCCCEECTT---------TCCEESCHHHHHHHHHHHT
T ss_pred CCcCeECCC---------CCCccCCHHHHHHHHHHHc
Confidence 346688884 9999999999999988555
No 197
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.90 E-value=2.1 Score=25.51 Aligned_cols=24 Identities=17% Similarity=0.490 Sum_probs=20.2
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~~~~~C~---------~C~k~F~~~~~L~~H~~ 33 (46)
T 2eoe_A 10 EKPYKCN---------ECGKVFTQNSHLANHQR 33 (46)
T ss_dssp CCSSEET---------TTTEECSSHHHHHHHHG
T ss_pred CCCeECC---------CcChhhCCHHHHHHHHH
Confidence 4457777 39999999999999986
No 198
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=75.70 E-value=1.4 Score=29.30 Aligned_cols=28 Identities=7% Similarity=0.096 Sum_probs=23.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+.-|.|.+ |.++|.+..+|+.|++-.|
T Consensus 12 ~~k~~~C~~---------C~k~f~~~~~L~~H~~~~h 39 (77)
T 2ct1_A 12 GEKPYECYI---------CHARFTQSGTMKMHILQKH 39 (77)
T ss_dssp CCCSEECTT---------TCCEESCHHHHHHHHHHHS
T ss_pred CCCCeECCC---------cCchhCCHHHHHHHHHHhc
Confidence 456688984 9999999999999987444
No 199
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=75.64 E-value=1.5 Score=27.17 Aligned_cols=28 Identities=11% Similarity=0.118 Sum_probs=22.7
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+.-|.|.+ |.++|.+..+|+.|++-.|
T Consensus 29 ~~~~~~C~~---------C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 29 GEKPYKCEF---------CEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CCCCEECSS---------SSCEESSHHHHHHHHHHHC
T ss_pred CCCCcCCCC---------CcchhCCHHHHHHHHHHhc
Confidence 356689983 9999999999999987443
No 200
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.61 E-value=2.7 Score=25.10 Aligned_cols=24 Identities=17% Similarity=0.629 Sum_probs=20.2
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|++
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2emg_A 10 ENPFICS---------ECGKVFTHKTNLIIHQK 33 (46)
T ss_dssp CCSCBCT---------TTCCBCSSHHHHHHHHT
T ss_pred CCCEECC---------ccCcccCCHHHHHHHHH
Confidence 4457777 49999999999999987
No 201
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=75.35 E-value=2.9 Score=37.93 Aligned_cols=62 Identities=23% Similarity=0.348 Sum_probs=41.0
Q ss_pred ceecccCCCceEE-EEee----cccccccccccccC-CCCCCccCCCccceeeeeEecCC-----------cEEEcccCC
Q psy6453 95 IHTCEKCEKPIMI-YGRM----IPCRHVFCLSCAQA-PRSPPTCLRCGEGVTRVEPTGLG-----------TVFMCTHGG 157 (282)
Q Consensus 95 iHFCdkCdlPI~I-YGRm----IPCKHVFCy~CA~l-~k~~k~CprC~d~V~rIEq~~lg-----------sVFMCt~gg 157 (282)
-.+|+.|+-+=.+ ..|. -==++.+|.-|.-. .-.-..|+.|.+. .+++-...+ .+..|..|+
T Consensus 182 ~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~-~~l~y~~~e~~~~~~~~~~~r~e~C~~C~ 260 (309)
T 2fiy_A 182 RTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES-KHLAYLSLEHDGQPAEKAVLRAETCPSCQ 260 (309)
T ss_dssp CSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC-SCCEEECCCC-CCCSTTCSEEEEEETTTT
T ss_pred CCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCC-CCeeEEEecCccccCCCcceEEEEccccc
Confidence 4899999876533 2221 22347889999876 2235679999997 566655433 388998644
No 202
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.30 E-value=2.7 Score=24.96 Aligned_cols=24 Identities=17% Similarity=0.425 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~~~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2eop_A 10 EKPHECR---------ECGKSFSFNSQLIVHQR 33 (46)
T ss_dssp CCSCBCT---------TTCCBCSSHHHHHHHHT
T ss_pred CCCeeCC---------CCCchhCCHHHHHHHHH
Confidence 4457776 49999999999999986
No 203
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.29 E-value=2.7 Score=25.19 Aligned_cols=24 Identities=17% Similarity=0.490 Sum_probs=20.1
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|++
T Consensus 10 ~k~~~C~---------~C~k~F~~~~~L~~H~~ 33 (46)
T 2enh_A 10 EKPYECD---------VCRKAFSHHASLTQHQR 33 (46)
T ss_dssp SSSCBCT---------TTCCBCSSSHHHHHHGG
T ss_pred CCCcCCC---------CcCchhCCHHHHHHHHH
Confidence 4457777 49999999999999987
No 204
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.28 E-value=2.9 Score=24.98 Aligned_cols=24 Identities=21% Similarity=0.445 Sum_probs=20.0
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|++
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2epz_A 10 EKPFDCI---------DCGKAFSDHIGLNQHRR 33 (46)
T ss_dssp CCSBCCT---------TTCCCBSSHHHHHHHHT
T ss_pred CCCeECC---------CCCceeCCHHHHHHHHH
Confidence 4456776 49999999999999987
No 205
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.19 E-value=2.6 Score=25.13 Aligned_cols=25 Identities=12% Similarity=0.375 Sum_probs=20.6
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|. .|.++|.+..+|+.|+.
T Consensus 9 ~~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq1_A 9 GEKPYKCN---------ECGKAFRAHSNLTTHQV 33 (46)
T ss_dssp CSCCCCCT---------TTTCCCSSHHHHHHHHT
T ss_pred CCCCeECC---------cCChhhCCHHHHHHHHH
Confidence 34557777 39999999999999987
No 206
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=75.18 E-value=2.3 Score=28.18 Aligned_cols=24 Identities=17% Similarity=0.625 Sum_probs=20.8
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 44 ~~~~~C~~---------C~~~f~~~~~L~~H~~ 67 (77)
T 2cot_A 44 EKPYKCDE---------CGKAFIQRSHLIGHHR 67 (77)
T ss_dssp SCSEECSS---------SCCEESSHHHHHHHGG
T ss_pred CcCeeCCC---------CCCccCCHHHHHHHHH
Confidence 45689984 9999999999999987
No 207
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=74.98 E-value=1.3 Score=31.02 Aligned_cols=18 Identities=22% Similarity=0.451 Sum_probs=12.2
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
..|.++|.+..+|+.|++
T Consensus 42 ~~C~~~f~~~~~l~~H~~ 59 (119)
T 2jp9_A 42 KDCERRFSRSDQLKRHQR 59 (119)
T ss_dssp TTCCCEESSHHHHHHHHH
T ss_pred CCCcCccCCHHHHHHHHH
Confidence 466677777777777765
No 208
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.92 E-value=2.8 Score=25.02 Aligned_cols=24 Identities=13% Similarity=0.438 Sum_probs=20.1
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~F~~~~~L~~H~~ 33 (46)
T 2enf_A 10 EKPYKCN---------ECGKVFTQNSHLVRHRG 33 (46)
T ss_dssp CCSCBCS---------SSCCBCSSHHHHHHHHT
T ss_pred CcCeECC---------CCCcccCCHHHHHHHHH
Confidence 4457777 49999999999999986
No 209
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.53 E-value=2.5 Score=25.15 Aligned_cols=27 Identities=15% Similarity=0.424 Sum_probs=21.6
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
+.-|.|. .|.++|.+..+|+.|+...|
T Consensus 10 ~k~~~C~---------~C~k~F~~~~~L~~H~~~~H 36 (47)
T 2epx_A 10 KKPYECI---------ECGKAFIQNTSLIRHWRYYH 36 (47)
T ss_dssp CCSBCCS---------SSCCCBSSHHHHHHHHTTTT
T ss_pred CCCEECC---------ccCchhCChHHHHHHhHhhc
Confidence 3457776 49999999999999987445
No 210
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=74.53 E-value=2 Score=22.89 Aligned_cols=21 Identities=14% Similarity=0.358 Sum_probs=17.0
Q ss_pred ccccccccChHhHHHHhhccC
Q psy6453 163 AGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHInH~h 183 (282)
..|.++|.+...|..|+.-.|
T Consensus 6 ~~C~k~f~~~~~l~~H~~~~H 26 (30)
T 1paa_A 6 GLCNRAFTRRDLLIRHAQKIH 26 (30)
T ss_dssp TTTCCBCSSSHHHHHHHTTTS
T ss_pred cccCcccCChHHHHHHHHHHc
Confidence 359999999999999964444
No 211
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=74.32 E-value=2 Score=32.90 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=17.5
Q ss_pred eeeEec-CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 141 RVEPTG-LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 141 rIEq~~-lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.++... .+..|.|.+ |.++|.+..+|+.|++
T Consensus 12 h~~~~h~Gek~y~C~~---------C~k~F~~~~~L~~H~~ 43 (133)
T 2lt7_A 12 HYELIVDGRVYYICIV---------CKRSYVCLTSLRRHFN 43 (133)
T ss_dssp EEEEEETTEEEEEETT---------TCCEESCHHHHHHHHH
T ss_pred hceeecCCCcCeECCC---------CCCCcCCHHHHHHHHH
Confidence 344444 456688875 5555555555555554
No 212
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.25 E-value=2.7 Score=24.64 Aligned_cols=17 Identities=24% Similarity=0.470 Sum_probs=15.7
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 17 ~C~k~f~~~~~L~~H~~ 33 (44)
T 2en7_A 17 ECGKAFRSKSYLIIHTR 33 (44)
T ss_dssp TTCCCCSSHHHHHHHHT
T ss_pred CCCCccCCHHHHHHHhh
Confidence 49999999999999986
No 213
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.18 E-value=3.4 Score=24.75 Aligned_cols=24 Identities=21% Similarity=0.521 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2yth_A 10 EKPFQCE---------ECGKRFTQNSHLHSHQR 33 (46)
T ss_dssp SSSBCCS---------SSCCCBSSHHHHHHHGG
T ss_pred CcCCCCC---------CCCcccCCHHHHHHHHH
Confidence 4457776 49999999999999986
No 214
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=73.98 E-value=3.1 Score=24.80 Aligned_cols=24 Identities=13% Similarity=0.329 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|++
T Consensus 10 ~k~~~C~---------~C~k~F~~~~~L~~H~~ 33 (46)
T 2em0_A 10 EKTWKCR---------ECDMCFSQASSLRLHQN 33 (46)
T ss_dssp CCCCCCS---------SSCCCCSSHHHHHHHGG
T ss_pred CcCeECC---------CCCcccCCHHHHHHHHH
Confidence 4456776 49999999999999987
No 215
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.98 E-value=2.3 Score=24.68 Aligned_cols=24 Identities=17% Similarity=0.476 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 9 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 32 (42)
T 2ytb_A 9 EKPYRCD---------QCGKAFSQKGSLIVHIR 32 (42)
T ss_dssp CCSBCCT---------TTTCCBSSHHHHHTTGG
T ss_pred CCCeeCC---------CccchhCCHHHHHHHHH
Confidence 4456776 49999999999999986
No 216
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=73.96 E-value=2.3 Score=29.11 Aligned_cols=28 Identities=39% Similarity=0.781 Sum_probs=22.0
Q ss_pred EEEcccCCccccCccccccccChHhHHHHhh-ccCCCC
Q psy6453 150 VFMCTHGGARHSTAGCKRTYLSQRDLMALGR-HLGPHP 186 (282)
Q Consensus 150 VFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn-H~h~~p 186 (282)
=|.|.+ |.++|.+..+|+.|++ |....|
T Consensus 4 py~C~~---------C~k~F~~~~~L~~H~~~Ht~ekp 32 (60)
T 4gzn_C 4 PFFCNF---------CGKTYRDASGLSRHRRAHLGYRP 32 (60)
T ss_dssp CEECTT---------TCCEESSHHHHHHHHHHHHTCCC
T ss_pred CccCCC---------CCCEeCCHHHHHHHHHHhCCCcC
Confidence 377774 9999999999999987 554333
No 217
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.76 E-value=2.9 Score=24.82 Aligned_cols=17 Identities=18% Similarity=0.411 Sum_probs=15.7
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 17 ~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytr_A 17 ECGKAFSQTSKLARHQR 33 (46)
T ss_dssp TTCCCCSSHHHHHHHHT
T ss_pred CCCCccCCHHHHHHHHH
Confidence 49999999999999986
No 218
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=73.66 E-value=2 Score=30.47 Aligned_cols=24 Identities=13% Similarity=0.371 Sum_probs=20.4
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.|+|.....|+.|.+
T Consensus 11 ekpy~C~~---------CgK~F~~~s~L~~H~r 34 (66)
T 2epp_A 11 AGILPCGL---------CGKVFTDANRLRQHEA 34 (66)
T ss_dssp CCCCCCTT---------TCCCCSCHHHHHHHHH
T ss_pred ccCcCCCC---------CCCccCCHHHHHhhhh
Confidence 45577874 9999999999999987
No 219
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.49 E-value=3.2 Score=24.76 Aligned_cols=17 Identities=12% Similarity=0.315 Sum_probs=15.7
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 17 ~C~k~F~~~~~L~~H~~ 33 (46)
T 2yti_A 17 ECGKVFTQNSHLARHRG 33 (46)
T ss_dssp SSCCCCSSHHHHHHHHT
T ss_pred CCCcccCChhHHHHHhH
Confidence 49999999999999986
No 220
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.21 E-value=3 Score=25.10 Aligned_cols=24 Identities=17% Similarity=0.488 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+...|+.|++
T Consensus 10 ~k~~~C~---------~C~k~F~~~~~L~~H~~ 33 (46)
T 2eom_A 10 ERGHRCS---------DCGKFFLQASNFIQHRR 33 (46)
T ss_dssp CSSCCCS---------SSCCCCSSHHHHHHHHH
T ss_pred CCCcCCC---------CCCCeeCChHHHHHHHH
Confidence 4456676 49999999999999987
No 221
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.10 E-value=3.4 Score=24.72 Aligned_cols=24 Identities=21% Similarity=0.469 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytq_A 10 EKPYGCS---------ECGKAFSSKSYLIIHMR 33 (46)
T ss_dssp CCSCBCS---------SSCCBCSCHHHHHHHHT
T ss_pred CCCcCCC---------ccChhhCChHHHHHHHH
Confidence 4457776 49999999999999987
No 222
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.06 E-value=3.3 Score=24.58 Aligned_cols=24 Identities=17% Similarity=0.505 Sum_probs=20.2
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq4_A 10 EKLYNCK---------ECGKSFSRAPCLLKHER 33 (46)
T ss_dssp CCCCCBT---------TTTBCCSCHHHHHHHHH
T ss_pred CCCeECC---------CCCCccCchHHHHHHHH
Confidence 4557777 39999999999999986
No 223
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.97 E-value=2.7 Score=25.32 Aligned_cols=17 Identities=12% Similarity=0.288 Sum_probs=15.8
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 17 ~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytm_A 17 ECGKAFGDNSSCTQHQR 33 (46)
T ss_dssp TTTBCCSSHHHHHHHHH
T ss_pred CCCchhCCHHHHHHHHH
Confidence 49999999999999987
No 224
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=72.91 E-value=1.9 Score=31.75 Aligned_cols=34 Identities=24% Similarity=0.728 Sum_probs=23.0
Q ss_pred CCcceecccCCCceEEEEe----ecc-cccccccccccC
Q psy6453 92 NPIIHTCEKCEKPIMIYGR----MIP-CRHVFCLSCAQA 125 (282)
Q Consensus 92 np~iHFCdkCdlPI~IYGR----mIP-CKHVFCy~CA~l 125 (282)
++.+.+|+.|+..+..-+. .=| |.+.||+.|-..
T Consensus 22 ~~~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~ 60 (86)
T 2ct7_A 22 DPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQ 60 (86)
T ss_dssp CCCEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSB
T ss_pred CCCEeECcCCCchheecCCCCceEeCCCCCccccccCCc
Confidence 5556789999998765432 223 777788877763
No 225
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.82 E-value=2.9 Score=25.06 Aligned_cols=24 Identities=29% Similarity=0.657 Sum_probs=20.2
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~F~~~~~L~~H~~ 33 (46)
T 2en9_A 10 KKLFKCN---------ECKKTFTQSSSLTVHQR 33 (46)
T ss_dssp SCCCBCT---------TTCCBCSSHHHHHHHHH
T ss_pred CCCEECC---------ccCcccCCHHHHHHHHH
Confidence 4457777 39999999999999987
No 226
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.58 E-value=3.3 Score=24.69 Aligned_cols=24 Identities=17% Similarity=0.386 Sum_probs=20.1
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~~~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoq_A 10 EKPFKCD---------ICGKSFCGRSRLNRHSM 33 (46)
T ss_dssp SCSCCCS---------SSCCCCSSHHHHHHHHH
T ss_pred CCCcCCC---------cCCchhCCHHHHHHHHH
Confidence 4457777 39999999999999987
No 227
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.42 E-value=3.2 Score=24.66 Aligned_cols=24 Identities=13% Similarity=0.441 Sum_probs=20.0
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~~~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2eov_A 10 EKPYKCS---------DCGKSFTWKSRLRIHQK 33 (46)
T ss_dssp CCSCBCS---------SSCCBCSSHHHHHHHHH
T ss_pred CCCccCC---------ccChhhCCHHHHHHHHH
Confidence 4457776 49999999999999986
No 228
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.41 E-value=3.6 Score=24.41 Aligned_cols=24 Identities=17% Similarity=0.599 Sum_probs=20.1
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep1_A 10 EKPYECS---------DCGKSFIKKSQLHVHQR 33 (46)
T ss_dssp CCSSCCS---------SSCCCCSSHHHHHHHHG
T ss_pred CCCcCCC---------CCCchhCCHHHHHHHHH
Confidence 4457776 49999999999999987
No 229
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=72.40 E-value=3.2 Score=24.83 Aligned_cols=24 Identities=17% Similarity=0.509 Sum_probs=20.1
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~F~~~~~L~~H~~ 33 (46)
T 2emk_A 10 EKPYECK---------ECGKAFSQTTHLIQHQR 33 (46)
T ss_dssp SCSCBCS---------SSCCBCSCHHHHHHHHH
T ss_pred CCceECC---------CCCchhCCHHHHHHHHH
Confidence 4457777 39999999999999987
No 230
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=71.64 E-value=2.2 Score=26.34 Aligned_cols=18 Identities=22% Similarity=0.161 Sum_probs=16.4
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
..|.++|.+...|+.|++
T Consensus 8 ~~C~~~f~~~~~l~~H~~ 25 (57)
T 3uk3_C 8 SYCGKFFRSNYYLNIHLR 25 (57)
T ss_dssp TTTCCBCSCHHHHHHHHH
T ss_pred CCCcchhCChHHHHHHHH
Confidence 359999999999999988
No 231
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.58 E-value=0.64 Score=34.13 Aligned_cols=46 Identities=20% Similarity=0.377 Sum_probs=31.6
Q ss_pred eecccCCCceEEEE-eecccc-----cccccccccC---CCCCCccCCCccceee
Q psy6453 96 HTCEKCEKPIMIYG-RMIPCR-----HVFCLSCAQA---PRSPPTCLRCGEGVTR 141 (282)
Q Consensus 96 HFCdkCdlPI~IYG-RmIPCK-----HVFCy~CA~l---~k~~k~CprC~d~V~r 141 (282)
..|.+|--.+..-. .+.||+ |+|..+|... .+....|+.|...+.-
T Consensus 16 ~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 16 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIM 70 (80)
T ss_dssp CCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCC
T ss_pred CCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeec
Confidence 67889954331100 136998 9999999976 2234689999998863
No 232
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=71.31 E-value=2.4 Score=22.23 Aligned_cols=19 Identities=11% Similarity=0.071 Sum_probs=16.5
Q ss_pred ccccccccChHhHHHHhhc
Q psy6453 163 AGCKRTYLSQRDLMALGRH 181 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHInH 181 (282)
..|.++|.+..+|+.|+..
T Consensus 6 ~~C~k~f~~~~~l~~H~~~ 24 (30)
T 1klr_A 6 QYCEFRSADSSNLKTHIKT 24 (30)
T ss_dssp SSSSCCCSCSHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHH
Confidence 3599999999999999873
No 233
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.79 E-value=3.1 Score=24.69 Aligned_cols=24 Identities=13% Similarity=0.443 Sum_probs=20.4
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2eq3_A 10 EKPYECNQ---------CGKAFSVRSSLTTHQA 33 (46)
T ss_dssp CCSSEETT---------TTEECSSHHHHHHHHT
T ss_pred CCCeECCC---------CChhhCCHHHHHHHHH
Confidence 45577874 9999999999999987
No 234
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.70 E-value=3.8 Score=24.64 Aligned_cols=24 Identities=13% Similarity=0.380 Sum_probs=20.0
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. -|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2eon_A 10 EKPYKCQ---------VCGKAFRVSSHLVQHHS 33 (46)
T ss_dssp CCSCBCS---------SSCCBCSSHHHHHHHTT
T ss_pred CcccCCC---------CCCcccCcHHHHHHHHH
Confidence 4457777 39999999999999986
No 235
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.47 E-value=3.5 Score=24.46 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+...|+.|+.
T Consensus 10 ~~~~~C~---------~C~k~f~~~~~L~~H~~ 33 (44)
T 2eou_A 10 KTTSECQ---------ECGKIFRHSSLLIEHQA 33 (44)
T ss_dssp SCCCCCT---------TTCCCCSSHHHHHHHHH
T ss_pred CcCeECC---------CCCcccCCHHHHHHHHH
Confidence 4456776 49999999999999987
No 236
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.44 E-value=3.8 Score=24.37 Aligned_cols=17 Identities=12% Similarity=0.206 Sum_probs=15.7
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+...|+.|+.
T Consensus 15 ~C~k~f~~~~~L~~H~~ 31 (43)
T 2yrm_A 15 ECDCRFSEEASLKRHTL 31 (43)
T ss_dssp SSCCCBSSHHHHHHHHH
T ss_pred CCCCeeCChHHHHHHHH
Confidence 49999999999999987
No 237
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=70.17 E-value=2.4 Score=27.79 Aligned_cols=25 Identities=16% Similarity=0.355 Sum_probs=20.5
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 11 ~~k~~~C~~---------C~k~f~~~~~L~~H~~ 35 (72)
T 1x6e_A 11 GEKPYGCVE---------CGKAFSRSSILVQHQR 35 (72)
T ss_dssp TCCCEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCccCCC---------CCCccCCHHHHHHHHH
Confidence 455688884 9999999999999964
No 238
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=70.13 E-value=3.1 Score=29.09 Aligned_cols=25 Identities=28% Similarity=0.595 Sum_probs=14.4
Q ss_pred ccccccc--cccCCCCCCccCCCccce
Q psy6453 115 RHVFCLS--CAQAPRSPPTCLRCGEGV 139 (282)
Q Consensus 115 KHVFCy~--CA~l~k~~k~CprC~d~V 139 (282)
+|.+|+. =....+++-.|+.|....
T Consensus 31 fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 31 YHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp BCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred HcccccCCCcCcCCCCccCChhhcCch
Confidence 4555554 223345666788887653
No 239
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=69.99 E-value=2.5 Score=27.48 Aligned_cols=25 Identities=24% Similarity=0.384 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 46 ~~~~~~C~~---------C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 46 GQKPFQCRI---------CMRNFSRSDHLTTHIR 70 (73)
T ss_dssp CCCCEECTT---------TCCEESCHHHHHHHHT
T ss_pred CCCCeECCC---------CCchhCCHHHHHHHHH
Confidence 345699984 9999999999999986
No 240
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=69.96 E-value=1.5 Score=30.54 Aligned_cols=22 Identities=23% Similarity=0.123 Sum_probs=19.1
Q ss_pred CccccccccChHhHHHHhh--ccC
Q psy6453 162 TAGCKRTYLSQRDLMALGR--HLG 183 (282)
Q Consensus 162 v~gCkRTYLSQRDLQAHIn--H~h 183 (282)
=.+|.++|-++.+|+.||+ |++
T Consensus 6 W~~C~~~f~~~~~l~~Hv~~~Hv~ 29 (64)
T 1zw8_A 6 WKECPESASSLFDLQRHLLKDHVS 29 (64)
T ss_dssp CTTCCCCCSSHHHHHHHHHHHSCC
T ss_pred eCCCCCcCCCHHHHHHHHHhhccC
Confidence 3789999999999999997 554
No 241
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=69.93 E-value=3.6 Score=24.61 Aligned_cols=24 Identities=17% Similarity=0.430 Sum_probs=20.1
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.++.+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2ely_A 10 EKPFKCV---------ECGKGFSRRSALNVHHK 33 (46)
T ss_dssp CCSBCCS---------SSCCCBSSTTHHHHHHH
T ss_pred CCCcccC---------ccCcccCCHHHHHHHHH
Confidence 4457777 39999999999999987
No 242
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=69.90 E-value=3.6 Score=27.72 Aligned_cols=27 Identities=11% Similarity=0.402 Sum_probs=22.4
Q ss_pred cEEEcccCCccccCccccccccChHhHHHHhhccCC
Q psy6453 149 TVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLGP 184 (282)
Q Consensus 149 sVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h~ 184 (282)
..|.|.+ |.++|.+...|+.|++..|.
T Consensus 64 ~~~~C~~---------C~~~f~~~~~L~~H~~~~H~ 90 (95)
T 2yt9_A 64 KPYICQS---------CGKGFSRPDHLNGHIKQVHS 90 (95)
T ss_dssp SSBCCSS---------SCCCBSSHHHHHHHHHHTSC
T ss_pred CceECCC---------ccchhCCHHHHHHHHHHhcC
Confidence 5677873 99999999999999986663
No 243
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.65 E-value=4.5 Score=24.20 Aligned_cols=24 Identities=17% Similarity=0.462 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2em6_A 10 EKCYKCD---------VCGKEFSQSSHLQTHQR 33 (46)
T ss_dssp CCCCBCS---------SSCCBCSSHHHHHHHHT
T ss_pred CCCeECC---------CCCcccCCHHHHHHHHH
Confidence 4457777 39999999999999976
No 244
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=69.12 E-value=1.6 Score=31.62 Aligned_cols=40 Identities=25% Similarity=0.534 Sum_probs=30.0
Q ss_pred ecccCCCceEE--EEeecccccccccccccC-CCCCCccCCCc
Q psy6453 97 TCEKCEKPIMI--YGRMIPCRHVFCLSCAQA-PRSPPTCLRCG 136 (282)
Q Consensus 97 FCdkCdlPI~I--YGRmIPCKHVFCy~CA~l-~k~~k~CprC~ 136 (282)
.|-.|..++.- ..|--=|+++||++|-.. -.+--.||+|.
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC~ 59 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGCI 59 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTTC
T ss_pred cccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCCC
Confidence 47888887742 135667999999999887 45677899984
No 245
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.76 E-value=4.5 Score=24.17 Aligned_cols=24 Identities=21% Similarity=0.548 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoh_A 10 KKPYECK---------ECRKTFIQIGHLNQHKR 33 (46)
T ss_dssp SCSCCCS---------SSCCCCSSHHHHHHHHH
T ss_pred CCCcCCC---------CcCchhCCHHHHHHHHH
Confidence 3457776 49999999999999987
No 246
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.46 E-value=3.4 Score=24.71 Aligned_cols=17 Identities=12% Similarity=0.202 Sum_probs=15.8
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|++
T Consensus 17 ~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytt_A 17 ECGKSFSGSYRLTQHWI 33 (46)
T ss_dssp SSCCCCSSHHHHHHHHT
T ss_pred CCCcccCCHHHHHHHHH
Confidence 49999999999999987
No 247
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=68.46 E-value=3.5 Score=30.40 Aligned_cols=26 Identities=23% Similarity=0.525 Sum_probs=15.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+..|.|. ..+|.++|.+..+|+.|++
T Consensus 88 ~~~~~C~-------~~~C~~~f~~~~~L~~H~~ 113 (155)
T 2rpc_A 88 EKPFPCP-------FPGCGKIFARSENLKIHKR 113 (155)
T ss_dssp CCSEECS-------CTTTCCEESCHHHHHHHHT
T ss_pred CCcccCC-------cCCCCCccCCHHHHHHHHH
Confidence 4456666 2556666666666666655
No 248
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=68.28 E-value=3.5 Score=24.58 Aligned_cols=24 Identities=13% Similarity=0.296 Sum_probs=20.2
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+..+|+.|++
T Consensus 8 ~k~~~C~~---------C~k~f~~~~~l~~H~~ 31 (45)
T 2epq_A 8 EKPYSCPV---------CGLRFKRKDRMSYHVR 31 (45)
T ss_dssp CCSSEETT---------TTEECSCHHHHHHHHH
T ss_pred CCCCcCCC---------CCcccCCHHHHHHHHH
Confidence 44577773 9999999999999987
No 249
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=68.24 E-value=2.9 Score=30.40 Aligned_cols=25 Identities=16% Similarity=0.313 Sum_probs=22.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+..|.|.+ |.++|.+...|+.|++
T Consensus 25 ~~~~h~C~~---------Cgk~F~~~~~L~~H~~ 49 (85)
T 2lv2_A 25 SAECHLCPV---------CGESFASKGAQERHLR 49 (85)
T ss_dssp CCTTEECTT---------SCCEESSHHHHHHHHH
T ss_pred CCCCEECCC---------CCCCcCcHHHHhhhhh
Confidence 466799985 9999999999999997
No 250
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.03 E-value=3.7 Score=24.45 Aligned_cols=25 Identities=12% Similarity=0.303 Sum_probs=20.9
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 9 ~~~~~~C~~---------C~k~f~~~~~L~~H~~ 33 (46)
T 2yso_A 9 REKSHQCRE---------CGEIFFQYVSLIEHQV 33 (46)
T ss_dssp CCCCEECTT---------TCCEESSHHHHHHHHH
T ss_pred CCCCEEccc---------cChhhCCHHHHHHHHH
Confidence 345688874 9999999999999987
No 251
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=67.96 E-value=2.9 Score=21.72 Aligned_cols=17 Identities=18% Similarity=0.331 Sum_probs=15.5
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+...|+.|+.
T Consensus 7 ~C~~~f~~~~~l~~H~~ 23 (29)
T 2m0e_A 7 HCDKKFNQVGNLKAHLK 23 (29)
T ss_dssp SCCCCCCTTTHHHHHHH
T ss_pred CCCcccCCHHHHHHHHH
Confidence 49999999999999976
No 252
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.91 E-value=2.2 Score=30.11 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=21.7
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
+.-|.|.+ |.++|.+...|+.|+.-.|
T Consensus 52 ~~~~~C~~---------C~k~F~~~~~L~~H~~~h~ 78 (98)
T 2gqj_A 52 QDALKCQH---------CRKQFKSKAGLNYHTMAEH 78 (98)
T ss_dssp HHHHSCSS---------SCCCCSCHHHHHHHHHHHS
T ss_pred CCCEECCC---------CCCccCCHHHHHHHHHHHc
Confidence 45688874 9999999999999986333
No 253
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.89 E-value=2.9 Score=27.63 Aligned_cols=24 Identities=21% Similarity=0.243 Sum_probs=20.6
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+...|+.|++
T Consensus 5 ~k~~~C~~---------C~k~f~~~~~L~~H~~ 28 (78)
T 2d9h_A 5 SSGLQCEI---------CGFTCRQKASLNWHQR 28 (78)
T ss_dssp CCCEECSS---------SCCEESSHHHHHHHHH
T ss_pred CcCeECCC---------CCCeeCCHHHHHHHHH
Confidence 45688874 9999999999999987
No 254
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=67.75 E-value=0.33 Score=27.59 Aligned_cols=18 Identities=11% Similarity=0.372 Sum_probs=15.6
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
+.|.++|.+..+|+.|+.
T Consensus 6 ~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 6 PACPKRFMRSDALSKHIK 23 (32)
T ss_dssp SSSCTTHHHHHTTSSSTT
T ss_pred CCCCcccCCHHHHHHHHH
Confidence 359999999999999976
No 255
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=66.94 E-value=3.1 Score=27.05 Aligned_cols=25 Identities=16% Similarity=0.408 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+..|.|.+ |.++|.+..+|+.|++
T Consensus 54 ~~~~~~C~~---------C~~~f~~~~~l~~H~~ 78 (82)
T 2kmk_A 54 GEKPHKCQV---------CGKAFSQSSNLITHSR 78 (82)
T ss_dssp TCCCEECTT---------TSCEESSHHHHHHHHH
T ss_pred CCCCCcCCC---------cchhhCChHHHHHHHH
Confidence 456788884 9999999999999986
No 256
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=65.55 E-value=2 Score=34.20 Aligned_cols=44 Identities=25% Similarity=0.627 Sum_probs=32.5
Q ss_pred ecccccCCcceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCccceeee
Q psy6453 86 IGEKVLNPIIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGEGVTRV 142 (282)
Q Consensus 86 IGEK~~np~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d~V~rI 142 (282)
||-.+.--.+.-|..|.||+ |-.|+.. +.+.+.|++|+-+-.|.
T Consensus 26 VG~~~~Ge~FVAC~eC~FPv-------------CrpCyEYErkeG~q~CpqCktrYkr~ 71 (93)
T 1weo_A 26 IGLTVEGDLFVACNECGFPA-------------CRPCYEYERREGTQNCPQCKTRYKRL 71 (93)
T ss_dssp CCBCSSSSBCCSCSSSCCCC-------------CHHHHHHHHHTSCSSCTTTCCCCCCC
T ss_pred cccCCCCCEEEeeeccCChh-------------hHHHHHHHHhccCccccccCCccccc
Confidence 45555454677888899886 6677766 46889999999887754
No 257
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.48 E-value=3.8 Score=29.48 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=28.9
Q ss_pred CccCCCccce-eeeeEe------cCCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 130 PTCLRCGEGV-TRVEPT------GLGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 130 k~CprC~d~V-~rIEq~------~lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
-.|..|.... .....+ +.+.-|.|.+ |.++|.+..+|+.|+.-.|
T Consensus 35 ~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~---------Cgk~F~~~~~L~~H~~~~H 86 (96)
T 2ctd_A 35 VSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHH---------CGKQLRSLAGMKYHVMANH 86 (96)
T ss_dssp EECTTTCSCEESSHHHHHHHHHHHCCCCCCCSS---------SCCCCSSHHHHHHHHHHHT
T ss_pred cCCCCCCCCcccCHHHHHHHHHHHCCCCeECCC---------CCCeeCCHHHHHHHhHHhc
Confidence 4577787776 332211 1345677764 8888999999999954444
No 258
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.15 E-value=3.8 Score=28.81 Aligned_cols=26 Identities=19% Similarity=0.360 Sum_probs=22.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhc
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRH 181 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH 181 (282)
.+.-|.|.+ |.++|.+...|+.|++.
T Consensus 16 ~~~~~~C~~---------C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 16 GASKFRCKD---------CSAAYDTLVELTVHMNE 41 (115)
T ss_dssp CCCSEEBSS---------SSCEESSHHHHHHHHHH
T ss_pred CCCCEECCc---------cCchhcCHHHHHHHHHH
Confidence 456789984 99999999999999984
No 259
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=65.01 E-value=3.8 Score=27.15 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=22.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ ..|.++|.+..+|+.|+.
T Consensus 32 ~~~~~~C~~-------~~C~~~f~~~~~l~~H~~ 58 (89)
T 2wbs_A 32 GEKPYHCDW-------DGCGWKFARSDELTRHYR 58 (89)
T ss_dssp SSCCEECCS-------TTTCCEESSHHHHHHHHH
T ss_pred CCCCcCCCC-------CCCCCccCCHHHHHHHHH
Confidence 356699983 689999999999999986
No 260
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=64.48 E-value=4.1 Score=28.34 Aligned_cols=44 Identities=16% Similarity=0.385 Sum_probs=30.0
Q ss_pred CccCCCccceeeeeEe------c-CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 130 PTCLRCGEGVTRVEPT------G-LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 130 k~CprC~d~V~rIEq~------~-lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
-.|..|+.....-..+ . .+..|.|. .+.|.++|.+..+|+.|++
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-------~~~C~~~f~~~~~L~~H~~ 117 (119)
T 2jp9_A 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCR-------WPSCQKKFARSDELVRHHN 117 (119)
T ss_dssp EECTTTCCEESCHHHHHHHHHHHHTCCCEECC-------STTCCCEESSHHHHHHHHH
T ss_pred ccCCccCchhCCHHHHHHHHHHhcCCCCeeCC-------CCCCccccCCHHHHHHHHh
Confidence 3477776654432222 2 45668885 3679999999999999986
No 261
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=64.32 E-value=2.6 Score=30.89 Aligned_cols=30 Identities=17% Similarity=0.393 Sum_probs=24.4
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+..|.|. ..+|.++|.+..+|+.|++-.|
T Consensus 94 ~~~~~~C~-------~~~C~~~f~~~~~L~~H~~~~H 123 (155)
T 2gli_A 94 GEKPYMCE-------HEGCSKAFSNASDRAKHQNRTH 123 (155)
T ss_dssp TCCCEECC-------STTCCCEESSSSTTHHHHHHTT
T ss_pred CCCCeeCC-------CCCCCCccCCHHHHHHHHHHhc
Confidence 45679998 4789999999999999986445
No 262
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=64.08 E-value=4 Score=28.85 Aligned_cols=27 Identities=26% Similarity=0.416 Sum_probs=22.9
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+..|.|. ..+|.++|.+..+|+.|++
T Consensus 59 ~~~~~~C~-------~~~C~~~f~~~~~l~~H~~ 85 (124)
T 1ubd_C 59 GEKPFQCT-------FEGCGKRFSLDFNLRTHVR 85 (124)
T ss_dssp CCCCEECC-------STTCCCEESCHHHHHHHHH
T ss_pred CCCCeeCC-------CCCCcCccCCHHHHHHHHH
Confidence 45679998 4789999999999999987
No 263
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=63.69 E-value=4.2 Score=28.75 Aligned_cols=18 Identities=11% Similarity=0.344 Sum_probs=11.5
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
..|.++|.+...|+.|++
T Consensus 11 ~~C~~~f~~~~~l~~H~~ 28 (124)
T 1ubd_C 11 KGCTKMFRDNSAMRKHLH 28 (124)
T ss_dssp TTCCCEESSHHHHHHHHG
T ss_pred CCCcCccCCHHHHHHHHH
Confidence 556666666666666664
No 264
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=62.84 E-value=0.85 Score=31.83 Aligned_cols=45 Identities=13% Similarity=0.029 Sum_probs=32.1
Q ss_pred ceecccCCCceEEEEeec-ccccccccccccC-CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMI-PCRHVFCLSCAQA-PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmI-PCKHVFCy~CA~l-~k~~k~CprC~d~V~ 140 (282)
..+|+.|.-+..- -.+. +|.|+||..|... -+..++||.+++++.
T Consensus 3 ~~~CpIs~~~m~d-PV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~ 49 (61)
T 2bay_A 3 HMLCAISGKVPRR-PVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLS 49 (61)
T ss_dssp -CCCTTTCSCCSS-EEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCC
T ss_pred eEEecCCCCCCCC-CEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCC
Confidence 4678877776653 3445 8999999999986 123456999988764
No 265
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=62.53 E-value=3 Score=30.74 Aligned_cols=44 Identities=27% Similarity=0.433 Sum_probs=31.5
Q ss_pred CccCC--CccceeeeeE------ec-CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 130 PTCLR--CGEGVTRVEP------TG-LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 130 k~Cpr--C~d~V~rIEq------~~-lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
-.|.. |.....+... .+ .+.-|.|. ..+|.++|.+..+|+.|++
T Consensus 91 ~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~-------~~~C~k~f~~~~~L~~H~~ 143 (155)
T 2rpc_A 91 FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE-------FEGCDRRFANSSDRKKHMH 143 (155)
T ss_dssp EECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCS-------STTCCCCBSSHHHHHHSST
T ss_pred ccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCC-------CCCCCCccCCHHHHHHHHH
Confidence 34766 7765543322 22 35569998 4789999999999999987
No 266
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=62.37 E-value=4.3 Score=26.93 Aligned_cols=41 Identities=17% Similarity=0.372 Sum_probs=28.3
Q ss_pred ccCCCccceeeeeEe------c-CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 131 TCLRCGEGVTRVEPT------G-LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 131 ~CprC~d~V~rIEq~------~-lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.|..|.........+ . .+..|.|.. |.++|.+..+|+.|++
T Consensus 36 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---------C~~~f~~~~~l~~H~~ 83 (90)
T 1a1h_A 36 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDI---------CGRKFARSDERKRHTK 83 (90)
T ss_dssp ECTTTCCEESCHHHHHHHHHHHHCCCCEECTT---------TCCEESSHHHHHHHHG
T ss_pred cCCCCCcccCCHHHHHHHHHHcCCCCCccCCC---------CCchhCCHHHHHHHHH
Confidence 466666544332221 2 455688883 9999999999999987
No 267
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.20 E-value=4.4 Score=26.65 Aligned_cols=16 Identities=13% Similarity=0.434 Sum_probs=10.9
Q ss_pred ccccccChHhHHHHhh
Q psy6453 165 CKRTYLSQRDLMALGR 180 (282)
Q Consensus 165 CkRTYLSQRDLQAHIn 180 (282)
|.++|.+..+|..|++
T Consensus 53 C~~~f~~~~~L~~H~~ 68 (86)
T 1x6h_A 53 CGKTFTRRNTMARHAD 68 (86)
T ss_dssp SCCEESCHHHHHHHHH
T ss_pred CCChhCCHHHHHHHHH
Confidence 6666666667776665
No 268
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=62.17 E-value=4.3 Score=28.34 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=40.6
Q ss_pred eecccCCCceEEEEeecccccccccccccCCCCCCccCCCccceeeeeE------ecCCcEEEcccCCccccCccccccc
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVTRVEP------TGLGTVFMCTHGGARHSTAGCKRTY 169 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~rIEq------~~lgsVFMCt~gg~r~~v~gCkRTY 169 (282)
+-|+.|+.-+.-...+. .|.--- . ..-.|..|......... ...+.-|.|.+ |.++|
T Consensus 17 ~~C~~C~~~f~~~~~l~--~H~~~H--~----~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~---------C~~~f 79 (107)
T 1wjp_A 17 YQCRLCNAKLSSLLEQG--SHERLC--R----NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLE---------CMRTF 79 (107)
T ss_dssp CBCTTTCCBCSSHHHHH--HHHHHH--H----HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGG---------GTEEC
T ss_pred eECCCCCCccCCHHHHH--HHHHHC--C----CCccCCCCCCccCCHHHHHHHHHcCCCCCccCcc---------ccchh
Confidence 77888887654322111 111000 0 12345666554432211 12456688873 99999
Q ss_pred cChHhHHHHhhccC
Q psy6453 170 LSQRDLMALGRHLG 183 (282)
Q Consensus 170 LSQRDLQAHInH~h 183 (282)
.+..+|+.|++-.|
T Consensus 80 ~~~~~L~~H~~~~H 93 (107)
T 1wjp_A 80 KSSFSIWRHQVEVH 93 (107)
T ss_dssp SSHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHc
Confidence 99999999997555
No 269
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.16 E-value=4.6 Score=26.55 Aligned_cols=25 Identities=20% Similarity=0.424 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+..|.|.+ |.++|.+..+|+.|++
T Consensus 12 ~~k~~~C~~---------C~~~f~~~~~l~~H~~ 36 (86)
T 1x6h_A 12 GEKPYACSH---------CDKTFRQKQLLDMHFK 36 (86)
T ss_dssp CCCCEECSS---------SSCEESSHHHHHHHHH
T ss_pred CCCCCcCCC---------CCCccCCHHHHHHHHH
Confidence 456799984 9999999999999975
No 270
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=61.89 E-value=6.3 Score=26.53 Aligned_cols=71 Identities=21% Similarity=0.380 Sum_probs=40.6
Q ss_pred eecccCCCceEEEEeecccccccccccccCCCCCCccCCCccceeeeeEe------c-CCcEEEcccCCccccCcccccc
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVTRVEPT------G-LGTVFMCTHGGARHSTAGCKRT 168 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~rIEq~------~-lgsVFMCt~gg~r~~v~gCkRT 168 (282)
+.|+.|+.-+.-...+. .|.-- -.....-.|..|.........+ + .+..|.|.+ |.++
T Consensus 9 ~~C~~C~~~f~~~~~l~--~H~~~----h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---------C~~~ 73 (96)
T 2dmd_A 9 HKCEVCGKCFSRKDKLK--THMRC----HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI---------CPYA 73 (96)
T ss_dssp CCBTTTTBCCCCHHHHH--HHGGG----CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSS---------SSCE
T ss_pred eECCCCCCccCCHHHHH--HHHHh----cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCC---------CCCc
Confidence 66777776554332221 22210 0011223477776654332221 2 456788884 9999
Q ss_pred ccChHhHHHHhhc
Q psy6453 169 YLSQRDLMALGRH 181 (282)
Q Consensus 169 YLSQRDLQAHInH 181 (282)
|.+..+|+.|++-
T Consensus 74 f~~~~~l~~H~~~ 86 (96)
T 2dmd_A 74 SRNSSQLTVHLRS 86 (96)
T ss_dssp ESSHHHHHHHHTT
T ss_pred cCCHHHHHHHHHH
Confidence 9999999999873
No 271
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.73 E-value=5.6 Score=23.74 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=19.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|+.
T Consensus 10 ~k~~~C~---------~C~k~f~~~~~L~~H~~ 33 (46)
T 2emz_A 10 ERPFKCN---------ECGKGFGRRSHLAGHLR 33 (46)
T ss_dssp CCSCCCS---------SSCCCCSSHHHHHHHHH
T ss_pred CCCeECC---------CCCcccCCHHHHHHHHH
Confidence 4457776 49999999999999986
No 272
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=61.20 E-value=4.6 Score=26.20 Aligned_cols=17 Identities=12% Similarity=0.258 Sum_probs=8.3
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|++
T Consensus 34 ~C~~~f~~~~~l~~H~~ 50 (82)
T 2kmk_A 34 YCGKRFHQKSDMKKHTF 50 (82)
T ss_dssp SSCCEESSHHHHHHHHH
T ss_pred cCChhhCCHHHHHHHHH
Confidence 34455555555555543
No 273
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=61.15 E-value=4.4 Score=27.26 Aligned_cols=17 Identities=12% Similarity=0.141 Sum_probs=11.5
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|++
T Consensus 40 ~C~~~f~~~~~l~~H~~ 56 (95)
T 2yt9_A 40 VCGLRFKRKDRMSYHVR 56 (95)
T ss_dssp SSCCEESCHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHH
Confidence 36667777777777765
No 274
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=60.82 E-value=5.1 Score=27.10 Aligned_cols=27 Identities=22% Similarity=0.430 Sum_probs=22.1
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+..|.|.+ ..|.++|.+..+|+.|++
T Consensus 42 ~~~~~~C~~-------~~C~~~f~~~~~l~~H~~ 68 (100)
T 2ebt_A 42 GEKPYKCTW-------EGCDWRFARSDELTRHYR 68 (100)
T ss_dssp CCCCEECCS-------SSCCCEESSHHHHHHHHH
T ss_pred CCCCeeCCC-------CCCCCccCCHHHHHHHHH
Confidence 345689983 689999999999999987
No 275
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.76 E-value=5 Score=26.00 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=21.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|. ..|.++|....+|+.|+.
T Consensus 33 ~~~p~~C~--------~~C~k~f~~~~~L~~H~~ 58 (66)
T 2eod_A 33 PRLPVACP--------NQCGVGTVAREDLPGHLK 58 (66)
T ss_dssp SSSEEECT--------TCCSCCEEETTTHHHHHH
T ss_pred CCcCccCC--------cccCcccccHHHHHHHHH
Confidence 35568887 258999999999999987
No 276
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=60.01 E-value=7.1 Score=25.75 Aligned_cols=35 Identities=29% Similarity=0.712 Sum_probs=24.1
Q ss_pred cceecccCCCceEEEEeecccccccccc--cccCCCCCCccCCCccc
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRSPPTCLRCGEG 138 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~~k~CprC~d~ 138 (282)
.+.+||.|+.- +|.+|++ =....+++-.|+.|...
T Consensus 14 ~ll~Cd~C~~~----------~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 14 KLILCDECNKA----------FHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCEECTTTCCE----------ECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CEEECCCCChh----------hCcccCCCCcCCCCCCcEECcCcccc
Confidence 46889999853 6888884 23334567779998753
No 277
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=59.78 E-value=5.7 Score=26.17 Aligned_cols=25 Identities=20% Similarity=0.470 Sum_probs=22.7
Q ss_pred EEcccCCccccCccccccccChHhHHHHhhccCC
Q psy6453 151 FMCTHGGARHSTAGCKRTYLSQRDLMALGRHLGP 184 (282)
Q Consensus 151 FMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h~ 184 (282)
|+|.+ |++.|-|...|++|-.-.|.
T Consensus 6 FiCP~---------C~~~l~s~~~L~~Hye~~H~ 30 (34)
T 3mjh_B 6 FICPQ---------CMKSLGSADELFKHYEAVHD 30 (34)
T ss_dssp EECTT---------TCCEESSHHHHHHHHHHHTS
T ss_pred cCCcH---------HHHHcCCHHHHHHHHHhccc
Confidence 99985 99999999999999988883
No 278
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=59.58 E-value=6.8 Score=28.22 Aligned_cols=35 Identities=23% Similarity=0.661 Sum_probs=24.5
Q ss_pred CcceecccCCCceEEEEeecccccccccc--cccCCCC-CCccCCCcc
Q psy6453 93 PIIHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRS-PPTCLRCGE 137 (282)
Q Consensus 93 p~iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~-~k~CprC~d 137 (282)
..+.+||.|+.. +|.+|++ =....++ +-+|+.|..
T Consensus 31 ~~ll~CD~C~~~----------yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 31 DKQLMCDECDMA----------FHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp GGEEECTTTCCE----------EEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCEEEcCCCCCc----------eecccCCCCcCCCCCCCCcCCcCccC
Confidence 346789999864 7888887 3344445 678888864
No 279
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=59.16 E-value=4.7 Score=25.40 Aligned_cols=24 Identities=29% Similarity=0.434 Sum_probs=20.0
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.|+|.+...|+.|..
T Consensus 6 ekp~~C~---------~CgK~F~~~s~L~~H~p 29 (36)
T 1fv5_A 6 PARFMCL---------PCGIAFSSPSTLEAHQA 29 (36)
T ss_dssp CCCCEET---------TTTEECSCHHHHHHHHH
T ss_pred ccCeECC---------CCCCccCCHhHccCcCC
Confidence 4557776 49999999999999973
No 280
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=58.92 E-value=3.1 Score=29.07 Aligned_cols=20 Identities=10% Similarity=0.052 Sum_probs=16.7
Q ss_pred cccccccChHhHHHHhhccC
Q psy6453 164 GCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 164 gCkRTYLSQRDLQAHInH~h 183 (282)
.|.++|.+..+|+.|+.|..
T Consensus 47 ~C~~~f~~~~~l~~H~~H~~ 66 (107)
T 1wjp_A 47 YCSLRFFSPELKQEHESKCE 66 (107)
T ss_dssp TTCCCBSSHHHHHHHHHHCS
T ss_pred CCCCccCCHHHHHHHHHcCC
Confidence 49999999999999996443
No 281
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=58.54 E-value=5.5 Score=26.95 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=9.2
Q ss_pred ccccccChHhHHHHhh
Q psy6453 165 CKRTYLSQRDLMALGR 180 (282)
Q Consensus 165 CkRTYLSQRDLQAHIn 180 (282)
|.++|.+..+|+.|+.
T Consensus 37 C~k~f~~~~~L~~H~~ 52 (88)
T 1llm_C 37 CGRKFARSDERKRHRD 52 (88)
T ss_dssp TCCEESSHHHHHHHHH
T ss_pred CCCccCCHHHHHHHHH
Confidence 5555555555555554
No 282
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=58.15 E-value=5.5 Score=27.43 Aligned_cols=71 Identities=18% Similarity=0.339 Sum_probs=42.0
Q ss_pred ceecccCCCceEEEEeecccccccccccccCCCCCCccCCCccceeeeeEe------c-CCcEEEcccCCccccCccccc
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVTRVEPT------G-LGTVFMCTHGGARHSTAGCKR 167 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~rIEq~------~-lgsVFMCt~gg~r~~v~gCkR 167 (282)
.+.|+.|+.-+.-...+. .|.-- - .....-.|..|.........+ + .+..|.|. .|.+
T Consensus 17 ~~~C~~C~~~f~~~~~l~--~H~~~--h--~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~---------~C~~ 81 (106)
T 2ee8_A 17 EFICKFCGRHFTKSYNLL--IHERT--H--TDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ---------ECGK 81 (106)
T ss_dssp CCBCSSSCCBCSSHHHHH--HHHHH--H--CCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCS---------SSCC
T ss_pred CeECCCCCCccCCHHHHH--HHHHH--c--CCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECC---------CcCC
Confidence 378888887654332221 22210 0 012345688888776543322 2 34456666 3899
Q ss_pred cccChHhHHHHhh
Q psy6453 168 TYLSQRDLMALGR 180 (282)
Q Consensus 168 TYLSQRDLQAHIn 180 (282)
+|.+..+|+.|++
T Consensus 82 ~f~~~~~L~~H~~ 94 (106)
T 2ee8_A 82 GFCQSRTLAVHKT 94 (106)
T ss_dssp CCSSHHHHHHHHH
T ss_pred cccCHHHHHHHHH
Confidence 9999999999986
No 283
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=57.61 E-value=7 Score=25.53 Aligned_cols=25 Identities=12% Similarity=0.392 Sum_probs=21.3
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+..|.|. .|.++|.+..+|+.|++
T Consensus 14 ~~~~~~C~---------~C~k~f~~~~~l~~H~~ 38 (74)
T 2lce_A 14 SDKPYKCD---------RCQASFRYKGNLASHKT 38 (74)
T ss_dssp CCCSBCCT---------TSSCCBSCHHHHHHHHH
T ss_pred CCCCeECC---------CCCceeCCHHHHHHHHH
Confidence 45668887 39999999999999987
No 284
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=57.27 E-value=9.2 Score=25.13 Aligned_cols=24 Identities=21% Similarity=0.519 Sum_probs=20.4
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|. .|.++|.+..+|+.|++
T Consensus 16 ~~~~~C~---------~C~~~f~~~~~l~~H~~ 39 (77)
T 2cot_A 16 RRRYKCD---------ECGKSFSHSSDLSKHRR 39 (77)
T ss_dssp SCSSBCS---------SSCCBCSCHHHHHHHHT
T ss_pred CCCEECC---------CCCcccCCHHHHHHHHH
Confidence 4567777 39999999999999987
No 285
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=57.17 E-value=3.9 Score=28.50 Aligned_cols=45 Identities=11% Similarity=0.204 Sum_probs=31.0
Q ss_pred CccCCCccceeeeeE------ec-CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 130 PTCLRCGEGVTRVEP------TG-LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 130 k~CprC~d~V~rIEq------~~-lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
-.|..|......... .+ .+..|.|.+ |.+.|.+..+|+.|++-.|
T Consensus 38 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---------C~~~f~~~~~l~~H~~~~~ 89 (110)
T 2csh_A 38 YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI---------CAKRFMWRDSFHRHVTSCT 89 (110)
T ss_dssp EECTTTSCEESSSHHHHHHHTTTCCCCCEECSS---------SCCEESCHHHHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCC---------CcchhcCHHHHHHHHHHcc
Confidence 346666654433221 12 456788984 9999999999999998655
No 286
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.14 E-value=3.7 Score=27.97 Aligned_cols=37 Identities=32% Similarity=0.796 Sum_probs=20.3
Q ss_pred eecccCCCceEEEEeeccc------ccccccc--cccCCCCCCccCCCc
Q psy6453 96 HTCEKCEKPIMIYGRMIPC------RHVFCLS--CAQAPRSPPTCLRCG 136 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPC------KHVFCy~--CA~l~k~~k~CprC~ 136 (282)
-+|.+|... |.|+-| +|.+|++ =....+++-+|+.|.
T Consensus 10 ~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 10 DFCSVCRKS----GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp CSCSSSCCS----SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCCccCCCC----CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 456666653 555555 4566555 223344566677774
No 287
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.31 E-value=9.5 Score=28.12 Aligned_cols=36 Identities=22% Similarity=0.631 Sum_probs=23.8
Q ss_pred CCcceecccCCCceEEEEeecccccccccc--cccCCCC-CCccCCCcc
Q psy6453 92 NPIIHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRS-PPTCLRCGE 137 (282)
Q Consensus 92 np~iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~-~k~CprC~d 137 (282)
...+.+||.|+.. +|.+|++ =..+.++ +-+|+.|..
T Consensus 38 ~~~ll~CD~C~~~----------yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 38 PNMQLLCDECNVA----------YHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp STTEEECSSSCCE----------EETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCEEEcCCCCcc----------ccccccCCCccCCCCCCCcCCcCccC
Confidence 3446788888864 6888876 3333445 667888864
No 288
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=54.55 E-value=3.9 Score=29.42 Aligned_cols=24 Identities=13% Similarity=0.146 Sum_probs=18.9
Q ss_pred CcEEEcccCCccccCccccccc-cChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTY-LSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTY-LSQRDLQAHIn 180 (282)
+.-|.|.+ |.++| .+..+|+.|+.
T Consensus 32 ~~~~~C~~---------C~k~F~~~~~~L~~H~~ 56 (96)
T 2ctd_A 32 KGSVSCPT---------CQAVGRKTIEGLKKHME 56 (96)
T ss_dssp TSCEECTT---------TCSCEESSHHHHHHHHH
T ss_pred CCCcCCCC---------CCCCcccCHHHHHHHHH
Confidence 45688873 88888 88888988875
No 289
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=53.64 E-value=7.9 Score=29.53 Aligned_cols=30 Identities=13% Similarity=0.355 Sum_probs=21.6
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
.+.-|.|. ...|.++|.+...|+.|++-.|
T Consensus 69 ~~~~~~C~-------~~~C~~~f~~~~~l~~H~~~~h 98 (190)
T 1tf6_A 69 GEKNFTCD-------SDGCDLRFTTKANMKKHFNRFH 98 (190)
T ss_dssp TCCCEECC-------SSSCCCEESCHHHHHHHHHTTS
T ss_pred CCCceeCC-------CCCCCCccCCHHHHHHHHHHhc
Confidence 35679998 3578888888888888875444
No 290
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=53.22 E-value=6.6 Score=26.51 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=26.8
Q ss_pred CcEEEcccCCcccc------------------CccccccccChHhHHHHhhccC
Q psy6453 148 GTVFMCTHGGARHS------------------TAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 148 gsVFMCt~gg~r~~------------------v~gCkRTYLSQRDLQAHInH~h 183 (282)
+.-|.|.+||..+. -..|.++|.+..+|+.|+.-.|
T Consensus 29 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~h 82 (88)
T 1llm_C 29 EKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLK 82 (88)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHHH
Confidence 34567776665543 3459999999999999998666
No 291
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=52.95 E-value=7.7 Score=27.26 Aligned_cols=29 Identities=24% Similarity=0.305 Sum_probs=19.6
Q ss_pred cceecccCCCceEEEEeecc----ccccccccccc
Q psy6453 94 IIHTCEKCEKPIMIYGRMIP----CRHVFCLSCAQ 124 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIP----CKHVFCy~CA~ 124 (282)
....|..|+.+|. ++.+- -.|.-|+.|+.
T Consensus 14 ~~~~C~~C~~~I~--~~~v~a~~~~~H~~CF~C~~ 46 (79)
T 2cor_A 14 GKYICQKCHAIID--EQPLIFKNDPYHPDHFNCAN 46 (79)
T ss_dssp CCCBCTTTCCBCC--SCCCCCSSSCCCTTTSBCSS
T ss_pred CCCCCccCCCEec--ceEEEECcceeCCCCCEeCC
Confidence 3467999999887 55442 45766766655
No 292
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=50.49 E-value=2.6 Score=32.43 Aligned_cols=41 Identities=24% Similarity=0.640 Sum_probs=27.4
Q ss_pred cCCcceecccCCCceEEEEeecccccccccc--cccCCCCCCccCCCccceee
Q psy6453 91 LNPIIHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRSPPTCLRCGEGVTR 141 (282)
Q Consensus 91 ~np~iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~~k~CprC~d~V~r 141 (282)
....+.+||.|+.- +|.+|++ =..+.+++-+|+.|.....+
T Consensus 69 ~~~~ll~Cd~C~~~----------yH~~Cl~ppl~~~P~g~W~C~~C~~~~~~ 111 (114)
T 2kwj_A 69 NDDQLLFCDDCDRG----------YHMYCLNPPVAEPPEGSWSCHLCWELLKE 111 (114)
T ss_dssp TTTTEEECSSSCCE----------EETTTSSSCCSSCCSSCCCCHHHHHHHHH
T ss_pred CCCceEEcCCCCcc----------ccccccCCCccCCCCCCeECccccchhhc
Confidence 34457899999864 5888887 33344567778888665543
No 293
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=50.41 E-value=11 Score=25.81 Aligned_cols=41 Identities=17% Similarity=0.297 Sum_probs=27.4
Q ss_pred ccccccccCCCCCCccCCCccceee----eeEec-CCcE-----EEcccCCc
Q psy6453 117 VFCLSCAQAPRSPPTCLRCGEGVTR----VEPTG-LGTV-----FMCTHGGA 158 (282)
Q Consensus 117 VFCy~CA~l~k~~k~CprC~d~V~r----IEq~~-lgsV-----FMCt~gg~ 158 (282)
++|.+|+... -...|..|+..|.. -+... ++.. |.|..|+.
T Consensus 4 ~yC~~cy~~~-~~~~C~~C~~~I~~~g~~~~~~~a~~~~~H~~CF~C~~C~~ 54 (77)
T 2egq_A 4 GSSGDCYKNF-VAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSV 54 (77)
T ss_dssp SCCTTCCCSC-CCCCCSSSCCCCCCCSSCCCEEEETTEEEETTTCBCSSSCC
T ss_pred eEchhHhchh-hCccCcccCCcccCCCCCceeEEECcceeCcccCEehhcCC
Confidence 5899998854 45789999999984 23333 4544 56665443
No 294
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.29 E-value=10 Score=25.57 Aligned_cols=22 Identities=18% Similarity=0.326 Sum_probs=17.1
Q ss_pred CccccccccChHhHHHHhhccC
Q psy6453 162 TAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 162 v~gCkRTYLSQRDLQAHInH~h 183 (282)
-..|.++|.+..+|+.|++..|
T Consensus 28 C~~C~k~f~~~~~L~~H~~~~H 49 (95)
T 2ej4_A 28 KKSCDRTFSTMHELVTHVTMEH 49 (95)
T ss_dssp CCCCCCCCSSHHHHHHHHHHTT
T ss_pred ccccccccCCHHHHHHHHHHhc
Confidence 3468899999999999987444
No 295
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=49.43 E-value=6.6 Score=30.00 Aligned_cols=26 Identities=23% Similarity=0.345 Sum_probs=13.9
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
...|.|. ...|.++|.+...|+.|++
T Consensus 10 ~~~~~C~-------~~~C~~~f~~~~~L~~H~~ 35 (190)
T 1tf6_A 10 YKRYICS-------FADCGAAYNKNWKLQAHLC 35 (190)
T ss_dssp CCCCBCS-------STTTCCBCSSHHHHHHHHH
T ss_pred CcceeCC-------CCCCcchhCCHHHHHHHHH
Confidence 4456664 2445555555555555544
No 296
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=48.79 E-value=8.7 Score=26.68 Aligned_cols=25 Identities=12% Similarity=0.267 Sum_probs=21.5
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+..|.|.+ |.++|.+..+|+.|++
T Consensus 34 ~~~~~~C~~---------C~~~f~~~~~l~~H~~ 58 (110)
T 2csh_A 34 GLRPYGCGV---------CGKKFKMKHHLVGHMK 58 (110)
T ss_dssp CCCSEECTT---------TSCEESSSHHHHHHHT
T ss_pred CCcCccCCC---------CCcccCCHHHHHHHHH
Confidence 345699984 9999999999999987
No 297
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=47.71 E-value=17 Score=24.94 Aligned_cols=42 Identities=19% Similarity=0.335 Sum_probs=30.6
Q ss_pred CccCCCccceeeeeEe------c-CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 130 PTCLRCGEGVTRVEPT------G-LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 130 k~CprC~d~V~rIEq~------~-lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
-.|..|.........+ + .+..|.|.+ |.++|.+..+|+.|++
T Consensus 18 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---------C~~~f~~~~~l~~H~~ 66 (106)
T 2ee8_A 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDI---------CHKAFRRQDHLRDHRY 66 (106)
T ss_dssp CBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSS---------SCCBCSCHHHHHHHGG
T ss_pred eECCCCCCccCCHHHHHHHHHHcCCCCCcCCCC---------ccchhCCHHHHHHHHH
Confidence 4588887765443322 2 356688874 9999999999999987
No 298
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=47.12 E-value=7.1 Score=28.01 Aligned_cols=27 Identities=15% Similarity=0.265 Sum_probs=20.6
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
+.-|.|.+ |.++|.+..+|..|++-.|
T Consensus 98 ~~~~~C~~---------C~k~f~~~~~l~~H~~~h~ 124 (129)
T 2wbt_A 98 EHTKVCPV---------CKKEFTSTDSALDHVCKKH 124 (129)
T ss_dssp CCCCBCTT---------TCCBCSSHHHHHHHHHHTT
T ss_pred CCCCCCCC---------CCcccCCHHHHHHHHHHHC
Confidence 34477763 8899999999999987544
No 299
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=46.92 E-value=23 Score=24.26 Aligned_cols=30 Identities=27% Similarity=0.585 Sum_probs=19.6
Q ss_pred ceecccCCCceE-----EEEeec-cccccccccccc
Q psy6453 95 IHTCEKCEKPIM-----IYGRMI-PCRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~-----IYGRmI-PCKHVFCy~CA~ 124 (282)
...|..|+.||. -+.+.. =-.|.-|+.|+.
T Consensus 5 ~~~C~~C~~~I~~~g~~~~~~a~~~~wH~~CF~C~~ 40 (76)
T 1x68_A 5 SSGCVACSKPISGLTGAKFICFQDSQWHSECFNCGK 40 (76)
T ss_dssp CCCCTTTCCCCCTTTTCCEEEETTEEEEGGGCBCTT
T ss_pred CCCCccCCCcccCCCCceeEEECCcccCcccCChhh
Confidence 357999999987 232211 246888888765
No 300
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.39 E-value=14 Score=24.75 Aligned_cols=18 Identities=11% Similarity=0.137 Sum_probs=16.3
Q ss_pred ccccccccChHhHHHHhh
Q psy6453 163 AGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 163 ~gCkRTYLSQRDLQAHIn 180 (282)
..|.++|.+...|+.|++
T Consensus 66 ~~C~k~f~~~~~L~~H~~ 83 (95)
T 2ej4_A 66 PREGKSFKAKYKLVNHIR 83 (95)
T ss_dssp SSTTCCCSSHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHH
Confidence 359999999999999987
No 301
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=46.28 E-value=11 Score=27.01 Aligned_cols=41 Identities=22% Similarity=0.677 Sum_probs=26.4
Q ss_pred eecccCCCceEE---EEeecccccccccccccCCCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMI---YGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~I---YGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~ 140 (282)
..|..|+.|+.- |-+ =..++|..|+... -..+|..|+..|.
T Consensus 34 F~C~~C~~~L~~~~~~~~---~g~~yC~~cy~~~-~~~~C~~C~~~I~ 77 (101)
T 2cup_A 34 FRCAKCLHPLANETFVAK---DNKILCNKCTTRE-DSPKCKGCFKAIV 77 (101)
T ss_dssp CCCSSSCCCTTSSCCEEE---TTEEECHHHHTTC-CCCBCSSSCCBCC
T ss_pred CcccccCCCCCcCeeECc---CCEEEChhHhhhh-cCCccccCCCccc
Confidence 347777777631 111 1346788887643 4578999999987
No 302
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=46.19 E-value=9.2 Score=29.20 Aligned_cols=79 Identities=13% Similarity=0.240 Sum_probs=48.2
Q ss_pred eecccccCCcceecccCCCceEEEEeecccccccccccccCCCCCCccCCCccceeeeeEe------c-CCcEEEcccCC
Q psy6453 85 LIGEKVLNPIIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVTRVEPT------G-LGTVFMCTHGG 157 (282)
Q Consensus 85 LIGEK~~np~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~rIEq~------~-lgsVFMCt~gg 157 (282)
.-|||- .-|+.|+.-+.-..-+. .|.-- =. ....-.|..|+.....-..+ + .+.-|.|.+
T Consensus 17 h~Gek~-----y~C~~C~k~F~~~~~L~--~H~~~--H~--~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~-- 83 (133)
T 2lt7_A 17 VDGRVY-----YICIVCKRSYVCLTSLR--RHFNI--HS--WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA-- 83 (133)
T ss_dssp ETTEEE-----EEETTTCCEESCHHHHH--HHHHH--HH--CCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESS--
T ss_pred cCCCcC-----eECCCCCCCcCCHHHHH--HHHHH--cC--CCCCeeCCccCeecccccchhhhccccCCCccccCCC--
Confidence 346665 88999998665432221 22210 00 11123477777654433322 2 456799984
Q ss_pred ccccCccccccccChHhHHHHhhccC
Q psy6453 158 ARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 158 ~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
|.++|.+..+|+.|++-.|
T Consensus 84 -------C~k~F~~~~~L~~H~~~hh 102 (133)
T 2lt7_A 84 -------CGKSFINYQFMSSHIKSVH 102 (133)
T ss_dssp -------SCCEESSHHHHHHHHHHHT
T ss_pred -------CCCCcCCHHHHHHHhHHhc
Confidence 9999999999999998656
No 303
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=45.97 E-value=1.8 Score=29.91 Aligned_cols=26 Identities=27% Similarity=0.563 Sum_probs=15.7
Q ss_pred ccccccc--cccCCCCCCccCCCcccee
Q psy6453 115 RHVFCLS--CAQAPRSPPTCLRCGEGVT 140 (282)
Q Consensus 115 KHVFCy~--CA~l~k~~k~CprC~d~V~ 140 (282)
+|.+|++ =....+++-+|+.|.....
T Consensus 27 fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 54 (60)
T 2puy_A 27 YHLDCLDPPLKTIPKGMWICPRCQDQML 54 (60)
T ss_dssp ECGGGSSSCCSSCCCSCCCCHHHHHHHH
T ss_pred EECCcCCCCcCCCCCCceEChhccChhh
Confidence 4666665 3333456677888866543
No 304
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=45.88 E-value=11 Score=27.11 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=21.7
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|++
T Consensus 71 ~~~~~~C~~---------C~k~f~~~~~l~~H~~ 95 (129)
T 2wbt_A 71 AISQFVCPL---------CLMPFSSSVSLKQHIR 95 (129)
T ss_dssp HHCSEECTT---------TCCEESSHHHHHHHHH
T ss_pred CCCCeECCC---------CCcccCCHhHHHHHHH
Confidence 456789984 9999999999999987
No 305
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=45.81 E-value=11 Score=28.85 Aligned_cols=17 Identities=18% Similarity=0.417 Sum_probs=10.5
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|++
T Consensus 166 ~C~~~f~~~~~L~~H~~ 182 (190)
T 2i13_A 166 ECGKSFSRRDALNVHQR 182 (190)
T ss_dssp TTCCEESSHHHHHHHHT
T ss_pred CCCCccCCHHHHHHHHH
Confidence 36666666666666655
No 306
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=45.70 E-value=12 Score=27.66 Aligned_cols=35 Identities=23% Similarity=0.659 Sum_probs=22.8
Q ss_pred CcceecccCCCceEEEEeecccccccccc--cccCCCCC-CccCCCcc
Q psy6453 93 PIIHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRSP-PTCLRCGE 137 (282)
Q Consensus 93 p~iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~~-k~CprC~d 137 (282)
..+.+||.|+.- +|.+|++ =....+++ -+|+.|..
T Consensus 39 ~~ll~CD~C~~~----------yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 39 DKQLMCDECDMA----------FHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp GGEEECTTTCCE----------EETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cceeEeCCCCCc----------cCcccCCCcccCCCCCCceECcCccc
Confidence 346889999863 6888877 22334455 67888864
No 307
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.09 E-value=6.8 Score=29.52 Aligned_cols=34 Identities=29% Similarity=0.730 Sum_probs=22.7
Q ss_pred ceecccCCCceEEEEeecccccccccc--cccCCCCCCccCCCccc
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRSPPTCLRCGEG 138 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~~k~CprC~d~ 138 (282)
+.+||.|+.- +|.+|++ =..+.+++-.|+.|...
T Consensus 31 ll~CD~C~~~----------~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 31 LLFCDGCDDN----------YHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CEECTTTCCE----------ECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred EEEcCCCCch----------hccccCCCCcccCCCCCcCCccCcCc
Confidence 5778877753 6888876 33344567778888653
No 308
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=44.36 E-value=4.1 Score=31.37 Aligned_cols=12 Identities=8% Similarity=0.008 Sum_probs=8.4
Q ss_pred CCccCCCcccee
Q psy6453 129 PPTCLRCGEGVT 140 (282)
Q Consensus 129 ~k~CprC~d~V~ 140 (282)
+.+|..|++.|.
T Consensus 51 ~yFC~~C~~LiS 62 (81)
T 2jrp_A 51 DYFCQNGHGLIS 62 (81)
T ss_dssp EECCTTTTCCCC
T ss_pred CeeeccCCCEee
Confidence 566777777665
No 309
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.94 E-value=12 Score=25.81 Aligned_cols=41 Identities=22% Similarity=0.443 Sum_probs=26.5
Q ss_pred ccccccccCCCCCCccCCCccceeeeeE-ec-CCcE-----EEcccCCc
Q psy6453 117 VFCLSCAQAPRSPPTCLRCGEGVTRVEP-TG-LGTV-----FMCTHGGA 158 (282)
Q Consensus 117 VFCy~CA~l~k~~k~CprC~d~V~rIEq-~~-lgsV-----FMCt~gg~ 158 (282)
.+|.+|+... -...|..|+..|..-|+ +. ++.+ |.|..|+.
T Consensus 4 ~yC~~cy~~~-~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~ 51 (82)
T 1x63_A 4 GSSGKCTTRE-DSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQ 51 (82)
T ss_dssp CCCCCCCSCC-CSCBCSSSCCBCCSSSCEEECSSCEEETTTCCCSSSCC
T ss_pred cCchhHHccc-cCCcCccCCcccccCceEEEECccccccccCchhhCCC
Confidence 5889998853 35789999999984333 22 4555 45665443
No 310
>3to7_A Histone acetyltransferase ESA1; MYST family; HET: ALY COA; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 3to6_A* 1fy7_A* 1mja_A* 1mjb_A* 3to9_A* 1mj9_A*
Probab=42.84 E-value=16 Score=33.59 Aligned_cols=30 Identities=3% Similarity=0.029 Sum_probs=26.0
Q ss_pred cCCcEEEcccCCccccCccccccccChHhHHHHhhccCC
Q psy6453 146 GLGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLGP 184 (282)
Q Consensus 146 ~lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h~ 184 (282)
..+.+|+|.. |.+.|.++.+|+.|...+..
T Consensus 32 ~~~~lyiCe~---------ClkY~~~~~~~~~H~~~C~~ 61 (276)
T 3to7_A 32 DEDFIYIDDF---------TLQYFGSKKQYERYRKKCTL 61 (276)
T ss_dssp SCCEEEECTT---------TCCEESSHHHHHHHHTSCCC
T ss_pred CCCeEEEccc---------hhhhcCCHHHHHHHhccCCC
Confidence 3688999996 99999999999999886654
No 311
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.14 E-value=12 Score=25.65 Aligned_cols=40 Identities=23% Similarity=0.216 Sum_probs=24.9
Q ss_pred ccccccccCCCCCCccCCCccceeeeeEec-CCcE-----EEcccCCc
Q psy6453 117 VFCLSCAQAPRSPPTCLRCGEGVTRVEPTG-LGTV-----FMCTHGGA 158 (282)
Q Consensus 117 VFCy~CA~l~k~~k~CprC~d~V~rIEq~~-lgsV-----FMCt~gg~ 158 (282)
.+|..|+... -...|..|+..|.. +.+. ++.. |.|..|+.
T Consensus 4 ~yC~~~y~~~-~~~~C~~C~~~I~~-~~v~a~~~~~H~~CF~C~~C~~ 49 (80)
T 1x3h_A 4 GSSGKDFLAM-FSPKCGGCNRPVLE-NYLSAMDTVWHPECFVCGDCFT 49 (80)
T ss_dssp CCCCCCCCCC-CSCBCTTTCCBCCS-SCEEETTEEECTTTCBCSSSCC
T ss_pred ccchhHHhhh-cCCccccCCCeecc-eeEEECCCeEecCcCChhhCCC
Confidence 5788888743 35689999988875 3333 4444 45665443
No 312
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=42.12 E-value=15 Score=25.45 Aligned_cols=16 Identities=31% Similarity=0.605 Sum_probs=9.6
Q ss_pred ccccccChHhHHHHhh
Q psy6453 165 CKRTYLSQRDLMALGR 180 (282)
Q Consensus 165 CkRTYLSQRDLQAHIn 180 (282)
|.++|.+...|+.|++
T Consensus 13 C~~~f~~~~~l~~H~~ 28 (124)
T 2dlq_A 13 CHKKFLSKYYLKVHNR 28 (124)
T ss_dssp TCCCCSSHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHH
Confidence 5566666666666654
No 313
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=42.05 E-value=5.7 Score=32.26 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=23.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh-ccC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR-HLG 183 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn-H~h 183 (282)
.+.-|.|.+ |.|.|.+...|++|.+ ..|
T Consensus 47 GekpfyC~~---------C~K~F~~~~~L~~H~rsK~H 75 (124)
T 1zr9_A 47 GGGLHRCLA---------CARYFIDSTNLKTHFRSKDH 75 (124)
T ss_dssp GGGCSEETT---------TTEECSSHHHHHHHTTCHHH
T ss_pred CCcceEccc---------CcchhCCHHHHHHHHhhhhh
Confidence 455688884 9999999999999988 455
No 314
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=41.85 E-value=13 Score=32.79 Aligned_cols=34 Identities=24% Similarity=0.687 Sum_probs=18.3
Q ss_pred cceecccCCCceEEEEeecccccccccc--cccCCCC-CCccCCCcc
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRS-PPTCLRCGE 137 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~-~k~CprC~d 137 (282)
...+||.|+.. +|.+|++ =....++ +-.|+.|..
T Consensus 188 ~lL~CD~C~~~----------yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 188 KQLMCDECDMA----------FHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp CCEECSSSCCE----------ECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CeEEcCCCCcc----------eeCccCCCCcccCCCCCCCCCcCCcC
Confidence 34666666642 5777776 3333445 567887753
No 315
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=41.47 E-value=13 Score=24.53 Aligned_cols=30 Identities=30% Similarity=0.471 Sum_probs=18.5
Q ss_pred ceecccCCCceEEEE----eeccccccccccccc
Q psy6453 95 IHTCEKCEKPIMIYG----RMIPCRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~IYG----RmIPCKHVFCy~CA~ 124 (282)
..-|..|+.+|.--. -+---.|.-|+.|+.
T Consensus 11 ~~~C~~C~~~i~~~e~~~~~~~~~~H~~CF~C~~ 44 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQ 44 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEEETTEEEETTTSSCTT
T ss_pred CccchhcCccccCCceEEEeCcCeeCcCCCcccC
Confidence 356888888876211 222346777777765
No 316
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=41.06 E-value=14 Score=25.27 Aligned_cols=39 Identities=21% Similarity=0.374 Sum_probs=24.9
Q ss_pred ccccccccCCCCCCccCCCccceeeeeEec-CCcE-----EEcccCC
Q psy6453 117 VFCLSCAQAPRSPPTCLRCGEGVTRVEPTG-LGTV-----FMCTHGG 157 (282)
Q Consensus 117 VFCy~CA~l~k~~k~CprC~d~V~rIEq~~-lgsV-----FMCt~gg 157 (282)
++|.+|+... -...|..|+..|.. +.+. ++.. |.|..|+
T Consensus 4 ~yC~~cy~~~-~~~~C~~C~~~I~~-~~v~a~~~~~H~~CF~C~~C~ 48 (80)
T 2cuq_A 4 GSSGPCYENK-FAPRCARCSKTLTQ-GGVTYRDQPWHRECLVCTGCQ 48 (80)
T ss_dssp CSCCCCCCCC-SSCCCTTTCCCCCS-CCEESSSSEECTTTCBCSSSC
T ss_pred EEcHHHHccc-cCCcCCCCCCEecC-cEEEECCchhhhhhCCcccCC
Confidence 5788888753 45789999998864 3333 4544 4555433
No 317
>2ou2_A Histone acetyltransferase htatip; structural genomics, structural genomics consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens}
Probab=40.97 E-value=18 Score=33.15 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=26.2
Q ss_pred cCCcEEEcccCCccccCccccccccChHhHHHHhhccCC
Q psy6453 146 GLGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLGP 184 (282)
Q Consensus 146 ~lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h~ 184 (282)
..+.+|+|.. |.+.|.++..|+.|...+..
T Consensus 30 ~~~~lyiCe~---------Clky~~~~~~~~~H~~~C~~ 59 (280)
T 2ou2_A 30 TLPVLYLCEF---------CLKYGRSLKCLQRHLTKCDL 59 (280)
T ss_dssp TSSCEEECTT---------TCCEESCHHHHHHHHHHCCC
T ss_pred CCCeEEECcc---------hhhhhCCHHHHHHHHhhCCC
Confidence 3689999996 99999999999999986654
No 318
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=40.80 E-value=21 Score=27.42 Aligned_cols=30 Identities=23% Similarity=0.433 Sum_probs=19.9
Q ss_pred ceecccCCCceEEEEeec---cccccccccccc
Q psy6453 95 IHTCEKCEKPIMIYGRMI---PCRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmI---PCKHVFCy~CA~ 124 (282)
...|..|+.||.-..++. =..|.-|+.|+.
T Consensus 61 ~~~C~~C~~~I~~~~~v~a~~~~wH~~CF~C~~ 93 (123)
T 2l4z_A 61 WKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSS 93 (123)
T ss_dssp CSBBSSSSSBCCSSSEEEETTEEEETTTSBCTT
T ss_pred CCcCcCCCCCcCCcEEEEeCCcEEcccccCcCc
Confidence 468999999986321121 257888887765
No 319
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=40.43 E-value=19 Score=24.09 Aligned_cols=24 Identities=17% Similarity=0.348 Sum_probs=15.8
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
+.-|.|.+ |.++|.+...|+.|++
T Consensus 6 ~~~~~C~~---------C~~~f~~~~~l~~H~~ 29 (96)
T 2dmd_A 6 SGPHKCEV---------CGKCFSRKDKLKTHMR 29 (96)
T ss_dssp CCCCCBTT---------TTBCCCCHHHHHHHGG
T ss_pred CcCeECCC---------CCCccCCHHHHHHHHH
Confidence 34466764 6777777777777766
No 320
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=39.79 E-value=8.5 Score=36.34 Aligned_cols=56 Identities=14% Similarity=0.293 Sum_probs=44.3
Q ss_pred CcceecccCCCceEEEEeecccccccccccccC-----CCCCCccCCCccceeeeeEecCCcEEEcc
Q psy6453 93 PIIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-----PRSPPTCLRCGEGVTRVEPTGLGTVFMCT 154 (282)
Q Consensus 93 p~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-----~k~~k~CprC~d~V~rIEq~~lgsVFMCt 154 (282)
.+.+.|+.-..+|.+=+|-.-|+|.-|++-... .+..-.||.|+..+. .+++.+..
T Consensus 247 ~vSL~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~------~~dL~ID~ 307 (371)
T 3i2d_A 247 IMSLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIA------LENLAISE 307 (371)
T ss_dssp EEESBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCC------GGGEEEBH
T ss_pred EEeecCCCccccccccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccC------HHHeeEcH
Confidence 346789999999999999999999999987543 346778999987653 46666666
No 321
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=38.90 E-value=24 Score=27.68 Aligned_cols=53 Identities=23% Similarity=0.470 Sum_probs=34.6
Q ss_pred eecccCCCceEEEEeecccc--------cccccccccCCCCCCccCCCccceeeeeEecCCcEEEcccCC
Q psy6453 96 HTCEKCEKPIMIYGRMIPCR--------HVFCLSCAQAPRSPPTCLRCGEGVTRVEPTGLGTVFMCTHGG 157 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCK--------HVFCy~CA~l~k~~k~CprC~d~V~rIEq~~lgsVFMCt~gg 157 (282)
.+|..|+- +|.||-|- |..|+.=....++.-.|+.|.-.+ ++..+-|+|..|.
T Consensus 16 ~~C~~C~~----~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~C~~-----C~k~~~~~C~~Cp 76 (107)
T 4gne_A 16 DYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDE-----CSSAAVSFCEFCP 76 (107)
T ss_dssp SSCTTTCC----CSEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGBCTT-----TCSBCCEECSSSS
T ss_pred CCCCcCCC----CCcEeEECCCCCCcccccccCcCCcCCCCCEECCCCCCCc-----CCCCCCcCcCCCC
Confidence 67888873 58888886 888887222245667799885333 2444558998633
No 322
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.76 E-value=12 Score=26.54 Aligned_cols=28 Identities=25% Similarity=0.566 Sum_probs=19.3
Q ss_pred ceecccCCCceEEEEeec----cccccccccccc
Q psy6453 95 IHTCEKCEKPIMIYGRMI----PCRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmI----PCKHVFCy~CA~ 124 (282)
...|..|+.+|. ++.+ =-.|.-|+.|+.
T Consensus 25 ~~~C~~C~~~I~--~~~v~a~~~~~H~~CF~C~~ 56 (90)
T 2dar_A 25 TPMCAHCNQVIR--GPFLVALGKSWHPEEFNCAH 56 (90)
T ss_dssp CCBBSSSCCBCC--SCEEEETTEEECTTTCBCSS
T ss_pred CCCCccCCCEec--ceEEEECCccccccCCccCC
Confidence 478999999983 5543 245777777764
No 323
>2xzf_A Formamidopyrimidine-DNA glycosylase; hydrolase-DNA complex; HET: VET; 1.80A {Lactococcus lactis subsp} PDB: 1pm5_A* 1xc8_A* 1pji_A* 2xzu_A* 3c58_A* 1tdz_A* 1nnj_A 1kfv_A 1pjj_A*
Probab=38.55 E-value=22 Score=31.01 Aligned_cols=29 Identities=17% Similarity=0.477 Sum_probs=22.5
Q ss_pred CCCccCCCccceeeeeEecCCcEEEcccCC
Q psy6453 128 SPPTCLRCGEGVTRVEPTGLGTVFMCTHGG 157 (282)
Q Consensus 128 ~~k~CprC~d~V~rIEq~~lgsVFMCt~gg 157 (282)
..+-|++|...|+++..- .-+.|.|..|-
T Consensus 241 ~G~pC~~CG~~I~~~~~~-gR~t~~CP~CQ 269 (271)
T 2xzf_A 241 TGEKCSRCGAEIQKIKVA-GRGTHFCPVCQ 269 (271)
T ss_dssp TTSBCTTTCCBCEEEEET-TEEEEECTTTS
T ss_pred CCCCCCCCCCEeeEEEEC-CCceEECCCCC
Confidence 457799999999988875 45677898753
No 324
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=38.18 E-value=4.2 Score=30.36 Aligned_cols=40 Identities=25% Similarity=0.513 Sum_probs=28.0
Q ss_pred cceecccCCCceEEEEeeccccccccccccc------CCCCCCccCCCccceeeee
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQ------APRSPPTCLRCGEGVTRVE 143 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~------l~k~~k~CprC~d~V~rIE 143 (282)
.+.|||.|+. .+|.+|+.=.. ..++.-+|+.|....++.+
T Consensus 32 ~ll~CD~C~~----------~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~~~ 77 (88)
T 1wev_A 32 QLVECQECHN----------LYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRMA 77 (88)
T ss_dssp CEEECSSSCC----------EEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCCST
T ss_pred ceEECCCCCC----------eEcCccCCCcccccccCCCCCCeeCccccchhhhhc
Confidence 3789999987 46888887432 3456778888877665443
No 325
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=38.02 E-value=8.6 Score=27.03 Aligned_cols=23 Identities=30% Similarity=0.573 Sum_probs=13.9
Q ss_pred ccccccc--cccCCCCCCccCCCcc
Q psy6453 115 RHVFCLS--CAQAPRSPPTCLRCGE 137 (282)
Q Consensus 115 KHVFCy~--CA~l~k~~k~CprC~d 137 (282)
+|.+|+. =..+.+++-.|+.|..
T Consensus 30 fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 30 FHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp ECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred hcccccCCCcCcCCCCCeECccccC
Confidence 5666665 3333456667888864
No 326
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.00 E-value=19 Score=24.85 Aligned_cols=29 Identities=28% Similarity=0.581 Sum_probs=14.2
Q ss_pred eecccCCCceEEEEeec----cccccccccccc
Q psy6453 96 HTCEKCEKPIMIYGRMI----PCRHVFCLSCAQ 124 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmI----PCKHVFCy~CA~ 124 (282)
..|..|+.||.--++++ =-.|.-|+.|+.
T Consensus 16 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~ 48 (82)
T 2ehe_A 16 NTCAECQQLIGHDSRELFYEDRHFHEGCFRCCR 48 (82)
T ss_dssp CBCTTTCCBCCSSCCBCCCSSCCCBTTTSBCTT
T ss_pred CcCccCCCccccCcEEEEeCCccccccCCeecC
Confidence 35666776665212222 134555555543
No 327
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=37.85 E-value=7.5 Score=24.04 Aligned_cols=22 Identities=36% Similarity=0.755 Sum_probs=16.8
Q ss_pred CccCCCccceeeeeEec-CCcEE
Q psy6453 130 PTCLRCGEGVTRVEPTG-LGTVF 151 (282)
Q Consensus 130 k~CprC~d~V~rIEq~~-lgsVF 151 (282)
..|++|+..|--.|+.. .|.+|
T Consensus 4 ~~C~~C~k~Vy~~Ek~~~~g~~~ 26 (31)
T 1zfo_A 4 PNCARCGKIVYPTEKVNCLDKFW 26 (31)
T ss_dssp CBCSSSCSBCCGGGCCCSSSSCC
T ss_pred CcCCccCCEEecceeEEECCeEe
Confidence 57999999998888777 45443
No 328
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=37.71 E-value=50 Score=21.70 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=20.5
Q ss_pred CCccCCCccceeeeeEecCCcEEEcccCCccccC
Q psy6453 129 PPTCLRCGEGVTRVEPTGLGTVFMCTHGGARHST 162 (282)
Q Consensus 129 ~k~CprC~d~V~rIEq~~lgsVFMCt~gg~r~~v 162 (282)
...||.|... .|+.-...+-++|..||.-|..
T Consensus 5 ~~~CP~C~~~--~l~~d~~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 5 QKVCPACESA--ELIYDPERGEIVCAKCGYVIEE 36 (50)
T ss_dssp CCSCTTTSCC--CEEEETTTTEEEESSSCCBCCC
T ss_pred cEeCcCCCCc--ceEEcCCCCeEECcccCCcccc
Confidence 4569999772 2333344455899988876653
No 329
>1k82_A Formamidopyrimidine-DNA glycosylase; protein-DNA complex, DNA repair, beta sandwich, zinc finger, helix two-turns helix, hydrolase/DNA complex; HET: PED; 2.10A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=37.68 E-value=21 Score=31.17 Aligned_cols=28 Identities=18% Similarity=0.488 Sum_probs=22.1
Q ss_pred CCCccCCCccceeeeeEecCCcEEEcccC
Q psy6453 128 SPPTCLRCGEGVTRVEPTGLGTVFMCTHG 156 (282)
Q Consensus 128 ~~k~CprC~d~V~rIEq~~lgsVFMCt~g 156 (282)
..+-|++|...|+++..-. -+.|.|..|
T Consensus 239 ~g~pC~~CG~~I~~~~~~g-R~t~~CP~C 266 (268)
T 1k82_A 239 KGEPCRVCGTPIVATKHAQ-RATFYCRQC 266 (268)
T ss_dssp TTSBCTTTCCBCEEEEETT-EEEEECTTT
T ss_pred CCCCCCCCCCEeeEEEECC-CceEECCCC
Confidence 4577999999999888754 567779864
No 330
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=37.66 E-value=9.8 Score=35.73 Aligned_cols=55 Identities=16% Similarity=0.372 Sum_probs=43.2
Q ss_pred cceecccCCCceEEEEeecccccccccccccC-----CCCCCccCCCccceeeeeEecCCcEEEcc
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA-----PRSPPTCLRCGEGVTRVEPTGLGTVFMCT 154 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l-----~k~~k~CprC~d~V~rIEq~~lgsVFMCt 154 (282)
+.+.|+.-...|.+=+|-.-|+|.-|++-... .+..-.||.|+..+. .+++.+..
T Consensus 214 vSL~CPlS~~ri~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~------~~dL~ID~ 273 (360)
T 4fo9_A 214 VSLMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAA------YESLILDG 273 (360)
T ss_dssp EESBCTTTCSBCSSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCC------GGGEEEBH
T ss_pred EeeeCCCccceeccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccC------HHHeEEcH
Confidence 35679999999999999999999999987644 346778999998664 45555554
No 331
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.29 E-value=12 Score=25.08 Aligned_cols=27 Identities=33% Similarity=0.795 Sum_probs=17.9
Q ss_pred eecccCCCceEEEEeec----cccccccccccc
Q psy6453 96 HTCEKCEKPIMIYGRMI----PCRHVFCLSCAQ 124 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmI----PCKHVFCy~CA~ 124 (282)
..|..|+.+|. ++.+ =..|.-|+.|+.
T Consensus 6 ~~C~~C~~~I~--~~~~~a~~~~~H~~CF~C~~ 36 (70)
T 2d8x_A 6 SGCHQCGEFII--GRVIKAMNNSWHPECFRCDL 36 (70)
T ss_dssp SBCSSSCCBCC--SCCEEETTEEECTTTSBCSS
T ss_pred CcCccCCCEec--ceEEEECcccccccCCEeCC
Confidence 57999999986 4433 245777776654
No 332
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=37.10 E-value=20 Score=29.01 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=14.8
Q ss_pred ccccccc--cccCCCCCCccCCCccce
Q psy6453 115 RHVFCLS--CAQAPRSPPTCLRCGEGV 139 (282)
Q Consensus 115 KHVFCy~--CA~l~k~~k~CprC~d~V 139 (282)
+|.+|+. =....++.-.|+.|...-
T Consensus 26 ~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 26 FHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp ECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred cCccccCCCCCCCCCCCEECccccCcc
Confidence 4666652 122245677899998653
No 333
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=36.96 E-value=18 Score=26.00 Aligned_cols=25 Identities=20% Similarity=0.469 Sum_probs=21.2
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+..+|+.|+.
T Consensus 22 ~~kpy~C~~---------C~k~F~~~~~L~~H~~ 46 (88)
T 1x6f_A 22 QNSTYQCKH---------CDSKLQSTAELTSHLN 46 (88)
T ss_dssp CCSCEECSS---------SCCEESSHHHHHHHHH
T ss_pred CCCCCcCCC---------CCCEeCCHHHHHHHHH
Confidence 456688884 9999999999999986
No 334
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=36.95 E-value=7.2 Score=34.47 Aligned_cols=30 Identities=20% Similarity=0.615 Sum_probs=0.0
Q ss_pred ceecccCCCceEEEEe---eccccccccccccc
Q psy6453 95 IHTCEKCEKPIMIYGR---MIPCRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~IYGR---mIPCKHVFCy~CA~ 124 (282)
...|..|..++.+.-| .--|.++||.+|..
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~ 407 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSR 407 (434)
T ss_dssp ---------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehhhCC
Confidence 4679999999987654 34577888888875
No 335
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=36.26 E-value=17 Score=27.83 Aligned_cols=40 Identities=30% Similarity=0.311 Sum_probs=27.6
Q ss_pred CccCCCccc-eeeeeEec--CCcEEEcccCCccccCccccccccCh
Q psy6453 130 PTCLRCGEG-VTRVEPTG--LGTVFMCTHGGARHSTAGCKRTYLSQ 172 (282)
Q Consensus 130 k~CprC~d~-V~rIEq~~--lgsVFMCt~gg~r~~v~gCkRTYLSQ 172 (282)
-.||.|+.. ...|+--. .-..-.|..||.+|.. .=++|++
T Consensus 24 F~CPfCnh~~sV~vkidk~~~~g~l~C~~Cg~~~~~---~i~~L~e 66 (85)
T 1wii_A 24 FTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQT---PITYLSE 66 (85)
T ss_dssp CCCTTTCCSSCEEEEEETTTTEEEEEESSSCCEEEE---ECCSSCC
T ss_pred EcCCCCCCCCeEEEEEEccCCEEEEEcccCCCeEEe---ccCccCc
Confidence 349999987 55555433 4566789999988854 4566664
No 336
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=36.26 E-value=13 Score=29.48 Aligned_cols=16 Identities=25% Similarity=0.540 Sum_probs=12.8
Q ss_pred CCccCCCccceeeeeE
Q psy6453 129 PPTCLRCGEGVTRVEP 144 (282)
Q Consensus 129 ~k~CprC~d~V~rIEq 144 (282)
..+||.|...+.++.+
T Consensus 148 ~~~Cp~CG~~~~~~~~ 163 (165)
T 2lcq_A 148 GGVCPDCGSKVKLIPR 163 (165)
T ss_dssp GGBCTTTCCBEEECCC
T ss_pred CCcCCCCCCcceeCCc
Confidence 3489999999888765
No 337
>1ee8_A MUTM (FPG) protein; beta sandwich, zinc finger, helix two-turns helix, riken STR genomics/proteomics initiative, RSGI, structural genomics; 1.90A {Thermus thermophilus} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=36.05 E-value=27 Score=30.58 Aligned_cols=29 Identities=21% Similarity=0.324 Sum_probs=22.5
Q ss_pred CCCccCCCccceeeeeEecCCcEEEcccCC
Q psy6453 128 SPPTCLRCGEGVTRVEPTGLGTVFMCTHGG 157 (282)
Q Consensus 128 ~~k~CprC~d~V~rIEq~~lgsVFMCt~gg 157 (282)
..+-|++|...|.++..- .-+.|.|..|-
T Consensus 234 ~g~pC~~CG~~I~~~~~~-gR~t~~CP~CQ 262 (266)
T 1ee8_A 234 EGLPCPACGRPVERRVVA-GRGTHFCPTCQ 262 (266)
T ss_dssp TTSBCTTTCCBCEEEESS-SCEEEECTTTT
T ss_pred CCCCCCCCCCEeeEEEEC-CCceEECCCCC
Confidence 457799999999988775 45677898754
No 338
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.01 E-value=19 Score=24.88 Aligned_cols=41 Identities=15% Similarity=0.294 Sum_probs=26.6
Q ss_pred cccccccccCCCCCCccCCCccceeeeeEec-CCcE-----EEcccCCcc
Q psy6453 116 HVFCLSCAQAPRSPPTCLRCGEGVTRVEPTG-LGTV-----FMCTHGGAR 159 (282)
Q Consensus 116 HVFCy~CA~l~k~~k~CprC~d~V~rIEq~~-lgsV-----FMCt~gg~r 159 (282)
..+|..|+. .....|..|+..|.. +.+. ++.. |.|..|+..
T Consensus 4 ~~yC~~~y~--~~~~~C~~C~~~I~~-~~~~a~~~~~H~~CF~C~~C~~~ 50 (81)
T 2dlo_A 4 GSSGEGCYV--ATLEKCATCSQPILD-RILRAMGKAYHPGCFTCVVCHRG 50 (81)
T ss_dssp CCCCCCCCC--SSCCBCTTTCCBCCS-CCEEETTEEECTTTCBCSSSCCB
T ss_pred CEECHHHhh--cCCCccccCCCeecc-eeEEECCccccHHhcCcccCCCc
Confidence 357888887 467889999998873 2222 4444 556654443
No 339
>3u6p_A Formamidopyrimidine-DNA glycosylase; DNA glycosylase, DNA repair, sequence context; HET: DNA 08Q; 1.60A {Geobacillus stearothermophilus} PDB: 3u6d_A* 3u6c_A* 3u6l_A* 3u6m_A* 3u6o_A* 3u6e_A* 3u6q_A* 3u6s_A* 3gp1_A* 3sbj_A* 2f5q_A* 2f5s_A* 3gq4_A* 3gpy_A* 2f5n_A 2f5o_A 2f5p_A 3sau_A* 3sar_A* 3sav_A* ...
Probab=35.97 E-value=24 Score=31.05 Aligned_cols=28 Identities=21% Similarity=0.540 Sum_probs=22.0
Q ss_pred CCCccCCCccceeeeeEecCCcEEEcccC
Q psy6453 128 SPPTCLRCGEGVTRVEPTGLGTVFMCTHG 156 (282)
Q Consensus 128 ~~k~CprC~d~V~rIEq~~lgsVFMCt~g 156 (282)
..+-|++|...|+++..-. .+.|.|..|
T Consensus 244 ~g~pC~~CG~~I~~~~~~g-R~t~~CP~C 271 (273)
T 3u6p_A 244 QGNPCKRCGTPIEKTVVAG-RGTHYCPRC 271 (273)
T ss_dssp TTSBCTTTCCBCEEEEETT-EEEEECTTT
T ss_pred CcCCCCCCCCeEEEEEECC-CCeEECCCC
Confidence 4578999999999888754 567789864
No 340
>2pq8_A Probable histone acetyltransferase MYST1; MOF, structural genomics, structural genomics consortium, SGC; HET: COA; 1.45A {Homo sapiens} PDB: 2giv_A* 3qah_A* 2y0m_A* 3toa_A* 3tob_A*
Probab=35.96 E-value=25 Score=32.23 Aligned_cols=29 Identities=7% Similarity=0.089 Sum_probs=26.0
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccCC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLGP 184 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h~ 184 (282)
.+.+|+|.. |.+.|.++..|+.|...+..
T Consensus 33 ~~~lyiCe~---------Clky~~~~~~~~~H~~~C~~ 61 (278)
T 2pq8_A 33 QPKLWLCEY---------CLKYMKYEKSYRFHLGQCQW 61 (278)
T ss_dssp SSCEEECTT---------TCCEESCHHHHHHHHHHCCC
T ss_pred CCEEEEccc---------hhhhhCCHHHHHHHHhhCCC
Confidence 689999996 99999999999999986664
No 341
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=35.87 E-value=13 Score=26.98 Aligned_cols=34 Identities=24% Similarity=0.545 Sum_probs=23.7
Q ss_pred cceecccCCCceEEEEeecccccccccccccCCCCCCccCCCcc
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGE 137 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d 137 (282)
.+.+||.|+. -+|.+|+.=..+.+++-.|+.|..
T Consensus 32 ~ll~CD~C~~----------~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 32 VILFCDMCNL----------AVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CEEECSSSCC----------EEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CEEECCCCCC----------ccccccCCCCcCCCCCcCCccCcC
Confidence 4678888875 357777765555567777888854
No 342
>2ozu_A Histone acetyltransferase MYST3; structural genomics, structural G consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} SCOP: d.108.1.1 PDB: 2rc4_A* 1m36_A
Probab=35.85 E-value=22 Score=32.72 Aligned_cols=29 Identities=21% Similarity=0.368 Sum_probs=25.7
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhhccCC
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLGP 184 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h~ 184 (282)
...+|+|.. |.|.|.++..|+.|...+..
T Consensus 38 ~~~lyiCe~---------Clky~~~~~~~~~H~~~C~~ 66 (284)
T 2ozu_A 38 LPKLYLCEF---------CLKYMKSRTILQQHMKKCGW 66 (284)
T ss_dssp CSEEEECTT---------TCCEESSHHHHHHHHHHCCC
T ss_pred CCcEEEchh---------hHhHhCCHHHHHHHhccCCC
Confidence 678999985 99999999999999986654
No 343
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=35.33 E-value=6.9 Score=31.68 Aligned_cols=49 Identities=22% Similarity=0.672 Sum_probs=33.8
Q ss_pred ceecccCCCceEEEEeecccccccccccccCCCCCCccCCCccceeeeeEecCCcEEEccc
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVTRVEPTGLGTVFMCTH 155 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~rIEq~~lgsVFMCt~ 155 (282)
.+.|-.|..|+ |.+..++ +.|.+|-. .+|..|...+.. ...+.+|+|..
T Consensus 55 ~~~C~~C~~~~---g~l~~~g-~~C~~C~~-----~VC~~C~~~~~~---~~~~~~W~C~v 103 (134)
T 1zbd_B 55 VNRCILCGEQL---GMLGSAS-VVCEDCKK-----NVCTKCGVETSN---NRPHPVWLCKI 103 (134)
T ss_dssp SSBCSSSCCBC---STTSCCE-EECTTTCC-----EEETTSEEECCC---SSSSCCEEEHH
T ss_pred CccccccCCCc---ccccCCC-CCCCCCCc-----ccccccCCccCC---CCCccceechh
Confidence 48999999988 4444544 56777765 677777665531 13578999995
No 344
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.75 E-value=19 Score=25.85 Aligned_cols=27 Identities=15% Similarity=0.158 Sum_probs=22.8
Q ss_pred CccccCccccccccChHhHHHHhhccC
Q psy6453 157 GARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 157 g~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
|+||--+.|.+.|.....|+.|.++.=
T Consensus 10 ~~~~~CPrCn~~f~~~~sLr~HmkycC 36 (49)
T 2e72_A 10 GGRKICPRCNAQFRVTEALRGHMCYCC 36 (49)
T ss_dssp SSCCCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred CCceeCCcccccccchHHHHhhhhhcC
Confidence 356666789999999999999999765
No 345
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.11 E-value=21 Score=26.56 Aligned_cols=23 Identities=13% Similarity=0.319 Sum_probs=19.6
Q ss_pred CcEEEcccCCccccCccccccccChHhHHHHh
Q psy6453 148 GTVFMCTHGGARHSTAGCKRTYLSQRDLMALG 179 (282)
Q Consensus 148 gsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHI 179 (282)
+.-|.|.+ |.++|.+...|+.|+
T Consensus 48 ekpf~C~~---------Cgk~F~~~~~L~~H~ 70 (102)
T 2ghf_A 48 NSSYVCVE---------CNFLTKRYDALSEHN 70 (102)
T ss_dssp SCCEEETT---------TTEEESSTHHHHTHH
T ss_pred CCCcCCCC---------CCcccCCHHHHHHHH
Confidence 34599984 999999999999994
No 346
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=33.87 E-value=28 Score=26.98 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=24.2
Q ss_pred CCCccCCCccceeeeeEec-CCcEEEcccCCccccCcc
Q psy6453 128 SPPTCLRCGEGVTRVEPTG-LGTVFMCTHGGARHSTAG 164 (282)
Q Consensus 128 ~~k~CprC~d~V~rIEq~~-lgsVFMCt~gg~r~~v~g 164 (282)
...+||.|++.+.--+... ....|.|..||..+....
T Consensus 3 ~m~FCp~Cgn~L~~~~~~~~~~~~~~C~~C~y~~~~~~ 40 (113)
T 3h0g_I 3 NFQYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAAT 40 (113)
T ss_dssp CCCCCSSSCCCCEECCCTTTCCCCEECSSSCCEECCSC
T ss_pred cceeCcCCCCEeeEcccCCCCeeEEECCCCCCeEEcCC
Confidence 3567888888765333222 345899998888776553
No 347
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=33.85 E-value=18 Score=27.08 Aligned_cols=37 Identities=27% Similarity=0.633 Sum_probs=22.9
Q ss_pred cCCcceecccCCCceEEEEeecccccccccccccC--CCCCCccCCCcc
Q psy6453 91 LNPIIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA--PRSPPTCLRCGE 137 (282)
Q Consensus 91 ~np~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l--~k~~k~CprC~d 137 (282)
.+..+.+||.|+.- +|.+|++=... .+++-+|+.|..
T Consensus 65 ~~~~ll~Cd~C~~~----------yH~~Cl~ppl~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 65 EDSKMLVCDTCDKG----------YHTFCLQPVMKSVPTNGWKCKNCRI 103 (111)
T ss_dssp CCTTEEECSSSCCE----------EEGGGSSSCCSSCCSSCCCCHHHHC
T ss_pred CCCCeeECCCCCcH----------HhHHhcCCccccCCCCCcCCcCCcC
Confidence 33457888888875 67788764322 345556776643
No 348
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=33.48 E-value=33 Score=25.57 Aligned_cols=29 Identities=31% Similarity=0.758 Sum_probs=21.4
Q ss_pred ecccCCC-ceE-EEEeeccccc----ccccccccC
Q psy6453 97 TCEKCEK-PIM-IYGRMIPCRH----VFCLSCAQA 125 (282)
Q Consensus 97 FCdkCdl-PI~-IYGRmIPCKH----VFCy~CA~l 125 (282)
.||.|+. ||. ++.+-.=|.- -+|.+|+..
T Consensus 23 ~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~ 57 (82)
T 2fc7_A 23 KCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDC 57 (82)
T ss_dssp CCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTC
T ss_pred CCCCCCCCcceeceEECCcCCCCcceecHHHHHhC
Confidence 7999996 886 7777766764 477777763
No 349
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=33.05 E-value=40 Score=22.89 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=19.7
Q ss_pred CccCCCccceeeeeEec-------CCcEEEcccCCcccc
Q psy6453 130 PTCLRCGEGVTRVEPTG-------LGTVFMCTHGGARHS 161 (282)
Q Consensus 130 k~CprC~d~V~rIEq~~-------lgsVFMCt~gg~r~~ 161 (282)
..||.|+..-....+.. +-.+|.|..||.+..
T Consensus 16 ~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w~ 54 (57)
T 1qyp_A 16 ITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWR 54 (57)
T ss_dssp CCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEE
T ss_pred eECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEec
Confidence 45777776554444443 235789998877653
No 350
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=32.86 E-value=10 Score=30.58 Aligned_cols=61 Identities=21% Similarity=0.484 Sum_probs=34.7
Q ss_pred eecccCCCceE-----EEEeecccccccccccccCCCCCC-ccCCCccceeeeeEe-c-CCcE-----EEcccCCcc
Q psy6453 96 HTCEKCEKPIM-----IYGRMIPCRHVFCLSCAQAPRSPP-TCLRCGEGVTRVEPT-G-LGTV-----FMCTHGGAR 159 (282)
Q Consensus 96 HFCdkCdlPI~-----IYGRmIPCKHVFCy~CA~l~k~~k-~CprC~d~V~rIEq~-~-lgsV-----FMCt~gg~r 159 (282)
..|..|+.|+. .|-+- ..++|..|+....+.+ .|..|+..|..-|.. . ++.+ |.|..|+..
T Consensus 33 F~C~~C~~~L~~~g~~~~~~~---g~~yC~~cy~~~~~~~~~C~~C~~~I~~~e~~i~a~~~~~H~~CF~C~~C~~~ 106 (188)
T 1rut_X 33 LKCSSCQAQLGDIGTSSYTKS---GMILCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNR 106 (188)
T ss_dssp CBCTTTCCBHHHHCSEEEEET---TEEECHHHHHHHHSCCEECTTTCCEECTTSEEEEETTEEECGGGCBCTTTCCB
T ss_pred cccCCCCcccccCCceEEEeC---CccccccccccccccCCccccCCCccccCcEEEEcCCCEEeCCCCeECCCCCC
Confidence 34677777753 23332 3567777776432333 799999999743321 1 4444 567665433
No 351
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=32.83 E-value=36 Score=28.11 Aligned_cols=40 Identities=23% Similarity=0.497 Sum_probs=22.3
Q ss_pred eecccCCCceEEEEeeccc------ccccccc--cccCCCCCCccCCCccce
Q psy6453 96 HTCEKCEKPIMIYGRMIPC------RHVFCLS--CAQAPRSPPTCLRCGEGV 139 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPC------KHVFCy~--CA~l~k~~k~CprC~d~V 139 (282)
-+|..|+.+ |.|+-| +|.+|+. =....++.-.|+.|...-
T Consensus 8 ~~C~~C~~~----g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 8 DWCAVCQNG----GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SSBTTTCCC----EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCC----CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 455566554 445444 4555552 222345677899997643
No 352
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.59 E-value=21 Score=26.60 Aligned_cols=25 Identities=8% Similarity=0.044 Sum_probs=21.4
Q ss_pred CCcEEEcccCCccccCccccccccChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYLSQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYLSQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|.+...|+.|+.
T Consensus 15 gekpy~C~~---------Cgk~F~~~~~L~~H~r 39 (102)
T 2ghf_A 15 VEGGYECKY---------CTFQTPDLNMFTFHVD 39 (102)
T ss_dssp CCSSEECSS---------CSCEESCHHHHHHHHH
T ss_pred CCcCcCCCC---------CCCccCCHHHHHHHHH
Confidence 456688884 9999999999999986
No 353
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=32.51 E-value=28 Score=24.42 Aligned_cols=29 Identities=21% Similarity=0.555 Sum_probs=19.3
Q ss_pred CCccCCCccceeeeeEecCCcEEEcccCCccccCccccccc
Q psy6453 129 PPTCLRCGEGVTRVEPTGLGTVFMCTHGGARHSTAGCKRTY 169 (282)
Q Consensus 129 ~k~CprC~d~V~rIEq~~lgsVFMCt~gg~r~~v~gCkRTY 169 (282)
.-.||.|.....-.+ +...|+ ++.|++.|
T Consensus 10 iL~CP~c~~~L~~~~-----~~L~C~-------~~~c~~~Y 38 (56)
T 2kpi_A 10 ILACPACHAPLEERD-----AELICT-------GQDCGLAY 38 (56)
T ss_dssp SCCCSSSCSCEEEET-----TEEEEC-------SSSCCCEE
T ss_pred heeCCCCCCcceecC-----CEEEcC-------CcCCCcEE
Confidence 346999998765433 667898 45666666
No 354
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=32.44 E-value=15 Score=26.81 Aligned_cols=32 Identities=25% Similarity=0.596 Sum_probs=21.7
Q ss_pred ceeccc--CCCceEEEE--eec--------ccccccccccccCC
Q psy6453 95 IHTCEK--CEKPIMIYG--RMI--------PCRHVFCLSCAQAP 126 (282)
Q Consensus 95 iHFCdk--CdlPI~IYG--RmI--------PCKHVFCy~CA~l~ 126 (282)
..+|+. |+..|..-. +++ -|.++||+.|-..-
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~w 68 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAY 68 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEEC
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCccc
Confidence 678998 988876532 222 25788888887753
No 355
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.06 E-value=26 Score=24.39 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=20.8
Q ss_pred CCcEEEcccCCccccCcccccccc-ChHhHHHHhh
Q psy6453 147 LGTVFMCTHGGARHSTAGCKRTYL-SQRDLMALGR 180 (282)
Q Consensus 147 lgsVFMCt~gg~r~~v~gCkRTYL-SQRDLQAHIn 180 (282)
.+.-|.|.+ |.++|. +...|+.|++
T Consensus 21 ~~~~~~C~~---------C~k~f~~~~~~L~~H~~ 46 (98)
T 2gqj_A 21 ERGEAVCPT---------CNVVTRKTLVGLKKHME 46 (98)
T ss_dssp TTSCCCCTT---------TCCCCSSCSHHHHHHHH
T ss_pred cCCCcCCCC---------CCCChhhhHHHHHHHHH
Confidence 345678874 999999 9999999987
No 356
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=32.04 E-value=25 Score=24.21 Aligned_cols=28 Identities=7% Similarity=0.027 Sum_probs=24.5
Q ss_pred cEEEcccCCccccCccccccccChHhHHHHhhccC
Q psy6453 149 TVFMCTHGGARHSTAGCKRTYLSQRDLMALGRHLG 183 (282)
Q Consensus 149 sVFMCt~gg~r~~v~gCkRTYLSQRDLQAHInH~h 183 (282)
+-|.|. =.+|.|++.....|-.||+-.|
T Consensus 37 ~~~~C~-------W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 37 EPLACN-------WEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCEECC-------CSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCEee-------CCCCcCCCCChHHHHhhccccC
Confidence 479999 5999999999999999998554
No 357
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=31.98 E-value=34 Score=26.77 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=24.5
Q ss_pred CCCccCCCccceeeeeEe-cCCcEEEcccCCccccCc
Q psy6453 128 SPPTCLRCGEGVTRVEPT-GLGTVFMCTHGGARHSTA 163 (282)
Q Consensus 128 ~~k~CprC~d~V~rIEq~-~lgsVFMCt~gg~r~~v~ 163 (282)
+..+||.|++.+.--|.. ....+|.|..||..+...
T Consensus 3 ~~~FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~~~~ 39 (122)
T 1twf_I 3 TFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAG 39 (122)
T ss_dssp CCCBCSSSCCBCEEEEETTTTEEEEECSSSSCEEECS
T ss_pred CCCcccccCccCcccccCcCCCCEEECCcCCCeeecC
Confidence 356788888777644322 256799999888776654
No 358
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=31.71 E-value=24 Score=26.82 Aligned_cols=17 Identities=18% Similarity=0.497 Sum_probs=15.4
Q ss_pred cccccccChHhHHHHhh
Q psy6453 164 GCKRTYLSQRDLMALGR 180 (282)
Q Consensus 164 gCkRTYLSQRDLQAHIn 180 (282)
.|.++|.+..+|+.|+.
T Consensus 138 ~C~~~f~~~~~L~~H~~ 154 (190)
T 2i13_A 138 ECGKSFSREDNLHTHQR 154 (190)
T ss_dssp TTCCEESCHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHH
Confidence 49999999999999987
No 359
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.66 E-value=27 Score=23.39 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=19.1
Q ss_pred ceecccCCCceEE---EEee-ccccccccccccc
Q psy6453 95 IHTCEKCEKPIMI---YGRM-IPCRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~I---YGRm-IPCKHVFCy~CA~ 124 (282)
...|..|+.||.- +.+. -=-.|.-|+.|+.
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~ 38 (72)
T 1x61_A 5 SSGCGGCGEDVVGDGAGVVALDRVFHVGCFVCST 38 (72)
T ss_dssp CCCCSSSCSCCCSSSCCEECSSSEECTTTCBCSS
T ss_pred CCCCccCCCccCCCceEEEECCCeEcccCCcccc
Confidence 4679999999863 1111 1256777777765
No 360
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=31.52 E-value=22 Score=25.01 Aligned_cols=38 Identities=29% Similarity=0.660 Sum_probs=27.1
Q ss_pred ceecccCCCceEEEEeecccccccccc--cccCCCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~~k~CprC~d~V~ 140 (282)
+.-|++|..||---+ -|-|+.|.. |.. .+|.+|.....
T Consensus 6 ~k~CP~C~~~Iek~~---GCnhmtC~~~~C~~-----~FCw~C~~~~~ 45 (60)
T 1wd2_A 6 TKECPKCHVTIEKDG---GCNHMVCRNQNCKA-----EFCWVCLGPWE 45 (60)
T ss_dssp CCCCTTTCCCCSSCC---SCCSSSCCSSGGGS-----CCSSSSCSCSG
T ss_pred ceECcCCCCeeEeCC---CCCcEEECCCCcCC-----EEeeCcCCCcc
Confidence 467999999997643 577777776 744 56777776543
No 361
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.39 E-value=17 Score=25.62 Aligned_cols=30 Identities=20% Similarity=0.476 Sum_probs=18.0
Q ss_pred ceecccCCCceEEEEee---ccccccccccccc
Q psy6453 95 IHTCEKCEKPIMIYGRM---IPCRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRm---IPCKHVFCy~CA~ 124 (282)
...|..|+.+|..--++ -=-.|.-|+.|+.
T Consensus 15 ~~~C~~C~~~I~~~e~v~a~~~~wH~~CF~C~~ 47 (82)
T 2co8_A 15 GDLCALCGEHLYVLERLCVNGHFFHRSCFRCHT 47 (82)
T ss_dssp SCBCSSSCCBCCTTTBCCBTTBCCBTTTCBCSS
T ss_pred CCCCcccCCCcccceEEEECCCeeCCCcCEEcC
Confidence 46789999988421111 1256777777764
No 362
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=31.38 E-value=13 Score=24.67 Aligned_cols=28 Identities=36% Similarity=0.808 Sum_probs=19.0
Q ss_pred ceecccCCCceEEEEeec----cccccccccccc
Q psy6453 95 IHTCEKCEKPIMIYGRMI----PCRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmI----PCKHVFCy~CA~ 124 (282)
...|..|+.||. ++.+ =-.|.-|+.|+.
T Consensus 5 ~~~C~~C~~~I~--~~~~~a~~~~~H~~CF~C~~ 36 (66)
T 1nyp_A 5 VPICGACRRPIE--GRVVNAMGKQWHVEHFVCAK 36 (66)
T ss_dssp CCEETTTTEECC--SCEECCTTSBEETTTCBCTT
T ss_pred CCCCcccCCEec--ceEEEECccccccCcCEECC
Confidence 467999999986 5543 245777777654
No 363
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=31.02 E-value=15 Score=35.96 Aligned_cols=29 Identities=28% Similarity=0.734 Sum_probs=22.3
Q ss_pred cceecccCCCceEEEEeeccccc--------cccccccc
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCRH--------VFCLSCAQ 124 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCKH--------VFCy~CA~ 124 (282)
..+.|..|. ..+|-+++-|++ +||++||.
T Consensus 457 ~~~~C~~C~--~~lFn~~~v~~~~~~~~~~~v~C~~Ca~ 493 (531)
T 3avr_A 457 PAHYCSICE--VEVFDLLFVTNESNSRKTYIVHCQDCAR 493 (531)
T ss_dssp CCEECTTTC--CEECSEEEEEECTTCSSEEEEECHHHHH
T ss_pred CCeeccccc--hhheeeEEEEecCCCCCCCCcCChhhhh
Confidence 479999999 455666656643 79999998
No 364
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.04 E-value=21 Score=24.58 Aligned_cols=28 Identities=36% Similarity=0.769 Sum_probs=18.1
Q ss_pred ceecccCCCceEEEEeecc----ccccccccccc
Q psy6453 95 IHTCEKCEKPIMIYGRMIP----CRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIP----CKHVFCy~CA~ 124 (282)
...|..|+.||. ++.+- -.|.-|+.|+.
T Consensus 5 ~~~C~~C~~~I~--~~~v~a~~~~wH~~CF~C~~ 36 (73)
T 1wig_A 5 SSGCDSCEKYIT--GRVLEAGEKHYHPSCALCVR 36 (73)
T ss_dssp CCSCSSSCCCCS--SCCBCCSSCCBCTTTSCCSS
T ss_pred cCCcccCCCEec--CeeEEeCCCCCCCCcCEeCC
Confidence 357999999985 44432 45666666654
No 365
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=29.94 E-value=30 Score=24.70 Aligned_cols=34 Identities=21% Similarity=0.498 Sum_probs=22.0
Q ss_pred ceecccCCCceEEEEeecccccccccc--cccCCCCCCccCCCccc
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRSPPTCLRCGEG 138 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~~k~CprC~d~ 138 (282)
+.+||.|+.- +|.+|++ =....+++-+|+.|...
T Consensus 24 ll~Cd~C~~~----------~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 24 VLRCTHCAAA----------FHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CEECSSSCCE----------ECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred EEECCCCCCc----------eecccCCCccCcCCCCCEECccccCC
Confidence 4677777642 4777764 23334567789999754
No 366
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.47 E-value=17 Score=24.27 Aligned_cols=29 Identities=28% Similarity=0.563 Sum_probs=18.8
Q ss_pred eecccCCCceEEEE---e-eccccccccccccc
Q psy6453 96 HTCEKCEKPIMIYG---R-MIPCRHVFCLSCAQ 124 (282)
Q Consensus 96 HFCdkCdlPI~IYG---R-mIPCKHVFCy~CA~ 124 (282)
..|..|+.+|.--+ + +-=-.|.-|+.|+.
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~ 38 (72)
T 1x4k_A 6 SGCQECKKTIMPGTRKMEYKGSSWHETCFICHR 38 (72)
T ss_dssp CCBSSSCCCCCSSSCEEEETTEEEETTTTCCSS
T ss_pred CCCccCCCcccCCceEEEECcCeecccCCcccc
Confidence 57999999987322 2 12256777777765
No 367
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.14 E-value=24 Score=25.83 Aligned_cols=46 Identities=17% Similarity=0.482 Sum_probs=34.3
Q ss_pred ceecccCCCceEEEEeecccccccccccccC---CCCCCccCCCcccee
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQA---PRSPPTCLRCGEGVT 140 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l---~k~~k~CprC~d~V~ 140 (282)
+..|.+|---|..--|---|.|.|=..|... .++..+||.|+....
T Consensus 15 i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 15 VKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 63 (74)
T ss_dssp SCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCC
T ss_pred CCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCC
Confidence 5789999887775555558999998888864 223478999998754
No 368
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=28.47 E-value=30 Score=26.49 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=14.7
Q ss_pred cccccc--ccccCCCCCCccCCCcc
Q psy6453 115 RHVFCL--SCAQAPRSPPTCLRCGE 137 (282)
Q Consensus 115 KHVFCy--~CA~l~k~~k~CprC~d 137 (282)
+|.+|+ .=....+++-.|+.|..
T Consensus 47 fH~~Cl~PpL~~~P~g~W~C~~C~~ 71 (88)
T 1fp0_A 47 FHLDCHLPALQDVPGEEWSCSLCHV 71 (88)
T ss_dssp ECTTSSSTTCCCCCSSSCCCCSCCC
T ss_pred eecccCCCCCCCCcCCCcCCccccC
Confidence 577776 33334567778888874
No 369
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=28.45 E-value=21 Score=25.27 Aligned_cols=29 Identities=31% Similarity=0.698 Sum_probs=19.8
Q ss_pred cceecccCCCceEEEEeec----cccccccccccc
Q psy6453 94 IIHTCEKCEKPIMIYGRMI----PCRHVFCLSCAQ 124 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmI----PCKHVFCy~CA~ 124 (282)
....|..|+.+|.- +.+ =-+|.-|+.|+.
T Consensus 24 ~~~~C~~C~~~I~~--~~~~a~~~~~H~~CF~C~~ 56 (89)
T 1x64_A 24 RMPLCDKCGSGIVG--AVVKARDKYRHPECFVCAD 56 (89)
T ss_dssp SCCBCTTTCCBCCS--CCEESSSCEECTTTCCCSS
T ss_pred cCCCcccCCCEecc--cEEEECCceECccCCEecC
Confidence 35789999999863 332 246777777765
No 370
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=28.22 E-value=13 Score=26.86 Aligned_cols=30 Identities=20% Similarity=0.586 Sum_probs=21.7
Q ss_pred eecccCCC--ceEEEEeecccccccccccccC
Q psy6453 96 HTCEKCEK--PIMIYGRMIPCRHVFCLSCAQA 125 (282)
Q Consensus 96 HFCdkCdl--PI~IYGRmIPCKHVFCy~CA~l 125 (282)
..|+.|.- +...-.+-+.|.|.||.+|...
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCCcCCCCCCCCCceEECCcCChHHhHHHCHH
Confidence 46999973 2223334589999999999874
No 371
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=28.20 E-value=5.6 Score=30.63 Aligned_cols=33 Identities=18% Similarity=0.442 Sum_probs=24.1
Q ss_pred cceecccCCCceEEEEeecccc----cccccccccCC
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCR----HVFCLSCAQAP 126 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCK----HVFCy~CA~l~ 126 (282)
++..|.+|..|+.-.+.||=|- .-|=++|..+.
T Consensus 2 ~~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt 38 (105)
T 2xb1_A 2 LVYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMT 38 (105)
T ss_dssp CCCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCC
T ss_pred CcCCCCCCCCccCCCCCEEEecCCcccccccccCCcC
Confidence 3678999999988889998775 33445666653
No 372
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=28.00 E-value=77 Score=23.72 Aligned_cols=45 Identities=9% Similarity=0.036 Sum_probs=25.2
Q ss_pred ecccCCCceE----EEEeecccccccccccccCCCCC-CccCCCccceeeee
Q psy6453 97 TCEKCEKPIM----IYGRMIPCRHVFCLSCAQAPRSP-PTCLRCGEGVTRVE 143 (282)
Q Consensus 97 FCdkCdlPI~----IYGRmIPCKHVFCy~CA~l~k~~-k~CprC~d~V~rIE 143 (282)
.|..|+.|+. .|. .-=..++|..|+...-+. ..|..|+..|..-+
T Consensus 34 ~C~~C~~~L~~~~~~~~--~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~~~ 83 (122)
T 1m3v_A 34 KCSSCQAQLGDIGTSSY--TKSGMILCRNDYIRLFGNSGAGGSGGHMGSGGD 83 (122)
T ss_dssp CCSSSCCCTTTSEECCE--EETTEEECHHHHHHHHCCCCSSSCSSCCSCCEE
T ss_pred CcCCCCCcccccCCeEE--EECCeeecHHHHHHHcCCCCccccCCCCcCchh
Confidence 4666776663 111 111245677776642112 27999999888533
No 373
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=27.78 E-value=7.2 Score=30.82 Aligned_cols=31 Identities=26% Similarity=0.735 Sum_probs=23.6
Q ss_pred ceecccCCCceEEEEee---cccccccccccccC
Q psy6453 95 IHTCEKCEKPIMIYGRM---IPCRHVFCLSCAQA 125 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRm---IPCKHVFCy~CA~l 125 (282)
+..|..|+.++.+..|- --|.++||.+|...
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 47899999998865443 35788999999763
No 374
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.74 E-value=19 Score=24.09 Aligned_cols=27 Identities=33% Similarity=0.636 Sum_probs=17.0
Q ss_pred eecccCCCceEEEEeec----cccccccccccc
Q psy6453 96 HTCEKCEKPIMIYGRMI----PCRHVFCLSCAQ 124 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmI----PCKHVFCy~CA~ 124 (282)
..|..|+.+|. ++.+ =-.|.-|+.|+.
T Consensus 6 ~~C~~C~~~I~--~~~~~a~~~~~H~~CF~C~~ 36 (69)
T 2cur_A 6 SGCVKCNKAIT--SGGITYQDQPWHADCFVCVT 36 (69)
T ss_dssp CCCSSSCCCCC--TTCEEETTEEECTTTTBCTT
T ss_pred CCCcccCCEeC--cceEEECccccccCcCEECC
Confidence 56889999884 3332 135666666654
No 375
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=27.72 E-value=14 Score=27.58 Aligned_cols=43 Identities=14% Similarity=0.369 Sum_probs=26.0
Q ss_pred eecccCCCceE-----EEEeecccccccccccccCCCCC-CccCCCccceee
Q psy6453 96 HTCEKCEKPIM-----IYGRMIPCRHVFCLSCAQAPRSP-PTCLRCGEGVTR 141 (282)
Q Consensus 96 HFCdkCdlPI~-----IYGRmIPCKHVFCy~CA~l~k~~-k~CprC~d~V~r 141 (282)
..|..|+.|+. .|.+- ..++|..|+....+. ..|..|+..|..
T Consensus 30 F~C~~C~~~L~~~~~~~~~~~---g~~yC~~~y~~~~~~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 30 LSCDLCGCRLGEVGRRLYYKL---GRKLCRRDYLRLFGQDGLCASCDKRIRA 78 (131)
T ss_dssp CBCTTTCCBCSSTTCCEEEET---TEEECHHHHHHHHCCCEECTTTCCEECT
T ss_pred cccCcCCCccccCCCeEEEEC---CEEeecCchhhhCCCccChhhcCCccCc
Confidence 34677777762 22222 246777777642122 289999999964
No 376
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=25.56 E-value=32 Score=25.48 Aligned_cols=44 Identities=14% Similarity=0.342 Sum_probs=27.9
Q ss_pred eecccCCCceEEEEeecccccccccccccCCCCCCccCCCcccee
Q psy6453 96 HTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGEGVT 140 (282)
Q Consensus 96 HFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d~V~ 140 (282)
..|..|+.|+.--.-..-=...+|..|+... -...|..|+..|.
T Consensus 31 F~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~-~~~~C~~C~~~I~ 74 (126)
T 2xqn_T 31 FCCFDCDSILAGEIYVMVNDKPVCKPCYVKN-HAVVCQGCHNAID 74 (126)
T ss_dssp SBCTTTCCBCTTSEEEEETTEEEEHHHHHHH-SCCBCTTTCSBCC
T ss_pred CCcCCCCCCCCcCEEEeECCEEechHHhCcC-cCccCcccCCcCC
Confidence 4578888876421111122457888888742 3567999998887
No 377
>2i50_A Ubiquitin carboxyl-terminal hydrolase 16; alpha/beta zinc-finger, ring-finger, ZNF-UBP, metalloprotein, ubiquitin-binding protein, USP; NMR {Homo sapiens}
Probab=25.02 E-value=76 Score=25.21 Aligned_cols=56 Identities=25% Similarity=0.360 Sum_probs=33.4
Q ss_pred ecccccccccccc-cC----C-CCCCccCCCccce----eeeeEec-CCcEEEcccCCccccCcccccccc
Q psy6453 111 MIPCRHVFCLSCA-QA----P-RSPPTCLRCGEGV----TRVEPTG-LGTVFMCTHGGARHSTAGCKRTYL 170 (282)
Q Consensus 111 mIPCKHVFCy~CA-~l----~-k~~k~CprC~d~V----~rIEq~~-lgsVFMCt~gg~r~~v~gCkRTYL 170 (282)
+.+|.|++=.-+. .. . .....|..|...= ...+++. .+.+++|-+|| .-||.|.+-
T Consensus 4 ~~~C~H~~~~~~l~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~~Lw~CL~CG----~vgCgr~~~ 70 (126)
T 2i50_A 4 MPVCRHIRKGLEQGNLKKALVNVEWNICQDCKTDNKVKDKAEEETEEKPSVWLCLKCG----HQGCGRNSQ 70 (126)
T ss_dssp -CCCSCHHHHCCHHHHHHHHSSCCSSSCHHHHTCTTSSCSSCTTTCCCCCEEEETTTC----CEEECTTSS
T ss_pred CCCCcChhhccccccccccccCCCCCcCccccccccccccccccccccccceeeeeCC----ccccCCCCc
Confidence 6789999843332 11 1 1235688887531 0112233 68999999877 589999763
No 378
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=24.79 E-value=41 Score=27.87 Aligned_cols=24 Identities=21% Similarity=0.289 Sum_probs=16.0
Q ss_pred ccccccc--cccCCCCCCccCCCccc
Q psy6453 115 RHVFCLS--CAQAPRSPPTCLRCGEG 138 (282)
Q Consensus 115 KHVFCy~--CA~l~k~~k~CprC~d~ 138 (282)
+|.+|+. =.....++-.|+.|...
T Consensus 24 ~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 24 FHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred hccccCCCCcccCCCCCCCCcCccCC
Confidence 4667763 23345678889999866
No 379
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=24.34 E-value=13 Score=26.16 Aligned_cols=44 Identities=32% Similarity=0.680 Sum_probs=24.2
Q ss_pred eecccCCCceEEEE-eeccc------ccccccccccCC--CCCCccCCCccceee
Q psy6453 96 HTCEKCEKPIMIYG-RMIPC------RHVFCLSCAQAP--RSPPTCLRCGEGVTR 141 (282)
Q Consensus 96 HFCdkCdlPI~IYG-RmIPC------KHVFCy~CA~l~--k~~k~CprC~d~V~r 141 (282)
.+|.+|+.+- .| .||-| +|..|..=.... .+.-.|+.|...+.+
T Consensus 19 ~~C~~C~~~~--~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k 71 (75)
T 2k16_A 19 WICPGCNKPD--DGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKK 71 (75)
T ss_dssp ECBTTTTBCC--SSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHCS
T ss_pred cCCCCCCCCC--CCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchhh
Confidence 5677777664 34 36655 355554432221 245568888766543
No 380
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.25 E-value=21 Score=24.73 Aligned_cols=29 Identities=31% Similarity=0.768 Sum_probs=19.2
Q ss_pred cceecccCCCceEEEEeec----cccccccccccc
Q psy6453 94 IIHTCEKCEKPIMIYGRMI----PCRHVFCLSCAQ 124 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmI----PCKHVFCy~CA~ 124 (282)
....|..|+.+|. ++.+ =-+|.-|+.|+.
T Consensus 14 ~~~~C~~C~~~I~--~~~~~a~~~~~H~~CF~C~~ 46 (79)
T 1x62_A 14 KLPMCDKCGTGIV--GVFVKLRDRHRHPECYVCTD 46 (79)
T ss_dssp CCCCCSSSCCCCC--SSCEECSSCEECTTTTSCSS
T ss_pred CCCccccCCCCcc--CcEEEECcceeCcCcCeeCC
Confidence 3578999999986 3322 245777777654
No 381
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=24.11 E-value=25 Score=24.08 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=22.0
Q ss_pred cceecccCCCceEEEEeeccccccccccccc----C-CCCCCccCCCccc
Q psy6453 94 IIHTCEKCEKPIMIYGRMIPCRHVFCLSCAQ----A-PRSPPTCLRCGEG 138 (282)
Q Consensus 94 ~iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~----l-~k~~k~CprC~d~ 138 (282)
.+.+||.|+.- +|.+|+.=.. + ..+.-+|+.|...
T Consensus 22 ~ll~Cd~C~~~----------~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 22 EMVICDKCGQG----------YHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CEEECSSSCCE----------EETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CEEECCCCChH----------HHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 46888888865 6777776311 1 3456667777654
No 382
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=23.42 E-value=68 Score=24.29 Aligned_cols=33 Identities=21% Similarity=0.597 Sum_probs=20.7
Q ss_pred ceecccCCCceEEEEeecccccccccc--cccCCCCCCccCCCcc
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLS--CAQAPRSPPTCLRCGE 137 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~--CA~l~k~~k~CprC~d 137 (282)
+.+||.|+.- +|.+|++ =..+.++.-+|+.|..
T Consensus 77 ll~Cd~C~~~----------yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 77 MLFCDSCDRG----------FHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CEECTTTCCE----------ECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred eEEcCCCCCe----------eecccCCCCCCCCCCCCeECCCCCC
Confidence 6778887753 6777773 1222355667888864
No 383
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=23.00 E-value=4.1 Score=30.47 Aligned_cols=31 Identities=26% Similarity=0.641 Sum_probs=22.7
Q ss_pred ceecccCCCceEEEEe---ecccccccccccccC
Q psy6453 95 IHTCEKCEKPIMIYGR---MIPCRHVFCLSCAQA 125 (282)
Q Consensus 95 iHFCdkCdlPI~IYGR---mIPCKHVFCy~CA~l 125 (282)
...|..|..++.+.-| ---|..+||.+|...
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCcccCC
Confidence 4678889988876544 345778899998874
No 384
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.84 E-value=44 Score=23.01 Aligned_cols=23 Identities=13% Similarity=0.041 Sum_probs=16.1
Q ss_pred ccccccccCCCCCCccCCCcccee
Q psy6453 117 VFCLSCAQAPRSPPTCLRCGEGVT 140 (282)
Q Consensus 117 VFCy~CA~l~k~~k~CprC~d~V~ 140 (282)
.+|..|+... -...|..|+..|.
T Consensus 4 ~yC~~dy~~~-~~~~C~~C~~~I~ 26 (81)
T 1v6g_A 4 GSSGLDYQRL-YGTRCFSCDQFIE 26 (81)
T ss_dssp CCCCSCGGGS-CCCBCTTTCCBCC
T ss_pred CcchHHHHhH-hCCcCccccCEec
Confidence 4677777743 3457888888886
No 385
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=21.67 E-value=1.3e+02 Score=24.13 Aligned_cols=44 Identities=23% Similarity=0.501 Sum_probs=27.9
Q ss_pred cccccccccccc----CCCCCCccCCCccceeeeeEecCCcEEEcccCCccccCccccccc
Q psy6453 113 PCRHVFCLSCAQ----APRSPPTCLRCGEGVTRVEPTGLGTVFMCTHGGARHSTAGCKRTY 169 (282)
Q Consensus 113 PCKHVFCy~CA~----l~k~~k~CprC~d~V~rIEq~~lgsVFMCt~gg~r~~v~gCkRTY 169 (282)
.|+|+-.+.=.. +..+...|..|... +.+|+|-+|| .-||.|..
T Consensus 14 ~C~h~~~l~q~~~~~~~~~~~~~C~~C~~~---------~~LwlCL~CG----~vgCgr~~ 61 (129)
T 2g45_A 14 VSKHAFSLKQLDNPARIPPCGWKCSKCDMR---------ENLWLNLTDG----SILCGRRY 61 (129)
T ss_dssp ECTTTTTCCCCSSCCCCCCCBCCCSSSSCC---------SSEEEETTTC----CEEECCBC
T ss_pred CCCCcCcccccccccccCCCCCcCccccCc---------CceEEeccCC----ccccCccc
Confidence 477876543211 11233458877654 5799999877 57888874
No 386
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.33 E-value=35 Score=23.39 Aligned_cols=23 Identities=13% Similarity=-0.116 Sum_probs=15.5
Q ss_pred ccccccccCCCCCCccCCCcccee
Q psy6453 117 VFCLSCAQAPRSPPTCLRCGEGVT 140 (282)
Q Consensus 117 VFCy~CA~l~k~~k~CprC~d~V~ 140 (282)
.+|..|+... -...|..|++.|.
T Consensus 4 ~yC~~~y~~~-~~~~C~~C~~~I~ 26 (81)
T 1x6a_A 4 GSSGKDYWGK-FGEFCHGCSLLMT 26 (81)
T ss_dssp CCCCCCSSCC-SSCBCTTTCCBCC
T ss_pred ccchhHHhhh-cCCcCccCCCCcC
Confidence 4677777643 3456888888777
No 387
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=21.30 E-value=44 Score=23.08 Aligned_cols=23 Identities=30% Similarity=0.706 Sum_probs=14.0
Q ss_pred cccccccc--ccCCCCCCccCCCcc
Q psy6453 115 RHVFCLSC--AQAPRSPPTCLRCGE 137 (282)
Q Consensus 115 KHVFCy~C--A~l~k~~k~CprC~d 137 (282)
+|.+|++= ....+++-.|+.|..
T Consensus 33 fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 33 YHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp EEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred hhhhccCCCCCCCCCCceECccccc
Confidence 46666653 122456777888864
No 388
>3w0f_A Endonuclease 8-like 3; helix two turns helix, zinc finger, DNA binding, hydrolase; 2.00A {Mus musculus}
Probab=21.28 E-value=46 Score=30.10 Aligned_cols=26 Identities=19% Similarity=0.457 Sum_probs=19.9
Q ss_pred ccCCCccceeeeeEec-CCcEEEcccC
Q psy6453 131 TCLRCGEGVTRVEPTG-LGTVFMCTHG 156 (282)
Q Consensus 131 ~CprC~d~V~rIEq~~-lgsVFMCt~g 156 (282)
-|++|...|.++..-. .-+-|.|++|
T Consensus 253 pC~~CGt~I~~~~~g~~gRsTyfCp~~ 279 (287)
T 3w0f_A 253 NCDQCHSKITVCRFGENSRMTYFCPHC 279 (287)
T ss_dssp BCTTTCCBCEEECSSTTCCCEEECTTT
T ss_pred CCCCCCCEEEEEEecCCCCCEEECCCc
Confidence 6889999998887662 4567889963
No 389
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=21.17 E-value=45 Score=27.20 Aligned_cols=26 Identities=31% Similarity=0.753 Sum_probs=16.1
Q ss_pred CCccCCCccceeeeeEecCCcEEEcccCC
Q psy6453 129 PPTCLRCGEGVTRVEPTGLGTVFMCTHGG 157 (282)
Q Consensus 129 ~k~CprC~d~V~rIEq~~lgsVFMCt~gg 157 (282)
.-+|+.|.. ..|.+... .|+.|..||
T Consensus 60 kytCPfCGk--~~vKR~av-GIW~C~~Cg 85 (116)
T 3cc2_Z 60 DHACPNCGE--DRVDRQGT-GIWQCSYCD 85 (116)
T ss_dssp CEECSSSCC--EEEEEEET-TEEEETTTC
T ss_pred CCcCCCCCC--ceeEecCc-eeEECCCCC
Confidence 456888876 23444333 699999633
No 390
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=20.75 E-value=24 Score=34.35 Aligned_cols=26 Identities=15% Similarity=0.130 Sum_probs=19.5
Q ss_pred eeeEecCCcEEEcccCCccccCccccccccChHh
Q psy6453 141 RVEPTGLGTVFMCTHGGARHSTAGCKRTYLSQRD 174 (282)
Q Consensus 141 rIEq~~lgsVFMCt~gg~r~~v~gCkRTYLSQRD 174 (282)
++........+.|+ ++||+.|.....
T Consensus 423 ~~~~y~G~~y~FCs--------~~Ck~~F~~~Pe 448 (512)
T 1mty_D 423 RVHEYNGEMHTFSD--------QWGERMWLAEPE 448 (512)
T ss_dssp EEEEETTEEEEESS--------HHHHHHHHHCGG
T ss_pred eEEEECCEEEEecC--------HHHHHHHHhChH
Confidence 55556677788898 899999986543
No 391
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=20.61 E-value=34 Score=31.28 Aligned_cols=30 Identities=20% Similarity=0.693 Sum_probs=23.1
Q ss_pred eecccCCC-ceEEEEeecccccccccccccC
Q psy6453 96 HTCEKCEK-PIMIYGRMIPCRHVFCLSCAQA 125 (282)
Q Consensus 96 HFCdkCdl-PI~IYGRmIPCKHVFCy~CA~l 125 (282)
-+|+.|+- |+.-|.-+-|=.-.||.+|.+.
T Consensus 35 ~yCPnCG~~~l~~f~nN~PVaDF~C~~C~Ee 65 (257)
T 4esj_A 35 SYCPNCGNNPLNHFENNRPVADFYCNHCSEE 65 (257)
T ss_dssp CCCTTTCCSSCEEC----CCCEEECTTTCCE
T ss_pred CcCCCCCChhhhhccCCCcccccccCCcchh
Confidence 58999998 8999999999999999999875
No 392
>1k3x_A Endonuclease VIII; hydrolase/DNA, hydrolase-DNA complex; HET: BRU PED; 1.25A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 PDB: 1k3w_A* 1q39_A 2ea0_A* 2oq4_A* 1q3c_A 2opf_A* 1q3b_A*
Probab=20.42 E-value=45 Score=28.98 Aligned_cols=28 Identities=18% Similarity=0.506 Sum_probs=21.6
Q ss_pred CCCccCCCccceeeeeEecCCcEEEcccC
Q psy6453 128 SPPTCLRCGEGVTRVEPTGLGTVFMCTHG 156 (282)
Q Consensus 128 ~~k~CprC~d~V~rIEq~~lgsVFMCt~g 156 (282)
..+-|++|..+|.++..-. -+.|.|..|
T Consensus 233 ~g~pC~~CG~~I~~~~~~g-R~t~~CP~C 260 (262)
T 1k3x_A 233 DGEPCERCGSIIEKTTLSS-RPFYWCPGC 260 (262)
T ss_dssp TTSBCTTTCCBCEEEEETT-EEEEECTTT
T ss_pred CcCCCCCCCCEeEEEEECC-CCeEECCCC
Confidence 4567999999999888654 566779864
No 393
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.35 E-value=26 Score=23.67 Aligned_cols=30 Identities=30% Similarity=0.639 Sum_probs=19.4
Q ss_pred ceecccCCCceEEEEeec----cccccccccccc
Q psy6453 95 IHTCEKCEKPIMIYGRMI----PCRHVFCLSCAQ 124 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmI----PCKHVFCy~CA~ 124 (282)
...|..|+.+|.--++++ =-.|.-|+.|+.
T Consensus 11 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~ 44 (77)
T 1g47_A 11 SATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQ 44 (77)
T ss_dssp CCBCSSSCCBCCSTTTCEEETTEEECTTTCCCTT
T ss_pred CCCchhcCCccCCCceEEEeCccEeccccCeECC
Confidence 467999999985222221 256888887765
No 394
>3twl_A Formamidopyrimidine-DNA glycosylase 1; helix two turns helix, zinc-LESS finger, hydrolase, DNA DAMA repair, DNA-binding, glycosidase, lyase; 1.70A {Arabidopsis thaliana} PDB: 3twm_A* 3twk_A
Probab=20.32 E-value=38 Score=30.42 Aligned_cols=31 Identities=10% Similarity=-0.057 Sum_probs=18.7
Q ss_pred CCCccC--CCccceeeeeEecCCcEEEcccCCcc
Q psy6453 128 SPPTCL--RCGEGVTRVEPTGLGTVFMCTHGGAR 159 (282)
Q Consensus 128 ~~k~Cp--rC~d~V~rIEq~~lgsVFMCt~gg~r 159 (282)
..+-|+ +|...|+++..-.+.+ |.|..|-..
T Consensus 246 ~g~pC~~~~CG~~I~~~~~~gR~t-~~CP~CQ~~ 278 (310)
T 3twl_A 246 EKKPGKAFVDGKKIDFITAGGRTT-AYVPELQKL 278 (310)
T ss_dssp TSCTTSCEETTEECEECCE-------ECTTTCCC
T ss_pred CCCCCCCCCCCCeEEEEEECCccc-EECCCCcCC
Confidence 355688 9999999988766654 669864443
No 395
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=20.08 E-value=31 Score=25.69 Aligned_cols=33 Identities=24% Similarity=0.530 Sum_probs=19.8
Q ss_pred ceecccCCCceEEEEeecccccccccccccCCCCCCccCCCcc
Q psy6453 95 IHTCEKCEKPIMIYGRMIPCRHVFCLSCAQAPRSPPTCLRCGE 137 (282)
Q Consensus 95 iHFCdkCdlPI~IYGRmIPCKHVFCy~CA~l~k~~k~CprC~d 137 (282)
+.+||.|+. -+|.+|+.=..+..++-.|+.|..
T Consensus 42 ll~CD~C~~----------~fH~~Cl~p~~vP~g~W~C~~C~~ 74 (88)
T 2l43_A 42 ILFCDMCNL----------AVHQECYGVPYIPEGQWLCRHCLQ 74 (88)
T ss_dssp EEECSSSCC----------CCCHHHHTCSSCCSSCCCCHHHHH
T ss_pred EEECCCCCc----------hhhcccCCCCccCCCceECccccC
Confidence 466776664 246777654444456666777754
Done!