RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6456
(76 letters)
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 275
Score = 37.5 bits (86), Expect = 3e-05
Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 18/69 (26%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQGAQTTLYCA-LDKKC 67
+ A PG V T+++ KSP +GA+T +Y A L
Sbjct: 217 DKILLNACCPGWVRTDMAGP-----------------KATKSPEEGAETPVYLALLPPDA 259
Query: 68 ERETGLYYA 76
E G + +
Sbjct: 260 EGPHGQFVS 268
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly
(Drosophila lebanonensis) [TaxId: 7225]}
Length = 254
Score = 31.5 bits (71), Expect = 0.005
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQGAQTTLYCA 62
T V Y+++PG+ T L F+S + + + + ++ Q Q +
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI 225
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI
{Human (Homo sapiens) [TaxId: 9606]}
Length = 244
Score = 30.0 bits (67), Expect = 0.019
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 7 NITNVNTYAVHPGVVDTELSRH 28
IT V T + P V+T ++
Sbjct: 178 QITGVKTTCLCPNFVNTGFIKN 199
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 29.3 bits (65), Expect = 0.028
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIP 34
NV+ G++DTE + S I
Sbjct: 186 VNVSITLCVLGLIDTETAMKAVSGIV 211
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer
{Caenorhabditis elegans [TaxId: 6239]}
Length = 250
Score = 28.7 bits (63), Expect = 0.041
Identities = 11/40 (27%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIP--GTAWLYQRVGGL 46
NV PG V T L ++ TA L L
Sbjct: 193 DNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKL 232
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 264
Score = 27.2 bits (60), Expect = 0.15
Identities = 6/45 (13%), Positives = 13/45 (28%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQ 53
+ ++ PG+V T + Y + + P
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG 226
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 274
Score = 26.9 bits (59), Expect = 0.20
Identities = 10/45 (22%), Positives = 14/45 (31%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQ 53
V +V PG V T + LY +G P+
Sbjct: 179 HGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG 223
>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 259
Score = 27.1 bits (59), Expect = 0.20
Identities = 4/21 (19%), Positives = 10/21 (47%)
Query: 9 TNVNTYAVHPGVVDTELSRHF 29
+V + PG +D ++ +
Sbjct: 188 PSVRVLSYAPGPLDNDMQQLA 208
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 26.4 bits (58), Expect = 0.27
Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 7 NITNVNTYAVHPGVVDTELSRHFDSIIP 34
+ VN + PG + T L +++P
Sbjct: 173 GVR-VN--CISPGNIWTPLWEELAALMP 197
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase
{Chlorobium tepidum [TaxId: 1097]}
Length = 240
Score = 26.6 bits (58), Expect = 0.27
Identities = 11/58 (18%), Positives = 15/58 (25%), Gaps = 11/58 (18%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQGAQTTLYCALDKK 66
NV V PG V T + D + + P A + L
Sbjct: 178 CNVRITDVQPGAVYTPMWGKVDDEMQA-----------LMMMPEDIAAPVVQAYLQPS 224
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 26.0 bits (57), Expect = 0.39
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIP 34
T++ + PGVV+T+ + P
Sbjct: 188 THIRATCISPGVVETQFAFKLHDKDP 213
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 237
Score = 25.8 bits (56), Expect = 0.42
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 10 NVNTYAVHPGVVDTELSRHFD 30
NV V PG +DT+++R D
Sbjct: 167 NVTANVVAPGYIDTDMTRALD 187
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 272
Score = 26.1 bits (57), Expect = 0.44
Identities = 7/45 (15%), Positives = 15/45 (33%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQ 53
+ +V PG+V+T + + Y + P+
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG 226
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase,
PGDH {Human (Homo sapiens) [TaxId: 9606]}
Length = 254
Score = 25.7 bits (56), Expect = 0.52
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 9 TNVNTYAVHPGVVDTELSRHFD 30
+ V A+ PG V+T + +
Sbjct: 172 SGVRLNAICPGFVNTAILESIE 193
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 252
Score = 25.0 bits (54), Expect = 1.1
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 9 TNVNTYAVHPGVVDTELSRHF 29
N+ +A+ P + +E S +F
Sbjct: 165 YNIPVFAIGPNYLHSEDSPYF 185
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 244
Score = 24.6 bits (53), Expect = 1.2
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 10 NVNTYAVHPGVVDTELSRHFDSIIPGTA 37
+ ++HPG+V T ++ I TA
Sbjct: 174 GIRVNSIHPGLVKTPMTDWVPEDIFQTA 201
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum
[TaxId: 144185]}
Length = 258
Score = 24.7 bits (53), Expect = 1.2
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 9 TNVNTYAVHPGVVDTELSRHF 29
+ A+ PG + T + +
Sbjct: 177 YGIRINAIAPGAIWTPMVENS 197
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase
{Pseudomonas fragi [TaxId: 296]}
Length = 260
Score = 24.8 bits (53), Expect = 1.4
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIP 34
+ A+ PG V T L S +
Sbjct: 176 QGITANAICPGWVRTPLVEKQISALA 201
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus
thermophilus [TaxId: 274]}
Length = 248
Score = 24.4 bits (53), Expect = 1.6
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Query: 7 NITNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRV 43
I VN AV PG + TE ++ P +
Sbjct: 170 RIR-VN--AVAPGAIATEAVLEAIALSPDPERTRRDW 203
>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 24.5 bits (52), Expect = 1.6
Identities = 4/21 (19%), Positives = 6/21 (28%)
Query: 9 TNVNTYAVHPGVVDTELSRHF 29
V+ + G V T
Sbjct: 176 FGVHLSLIECGPVHTAFMEKV 196
>d2bjra1 b.169.1.1 (A:6-184) Sperm motility protein MFP2 {Pig
roundworm (Ascaris suum), isoform B [TaxId: 6253]}
Length = 179
Score = 24.0 bits (52), Expect = 1.9
Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 38 WLYQRVGGLFIKSPLQ-GAQTTLYCAL 63
W + +G F +P++ Q +Y AL
Sbjct: 6 WAFGPIGSPFPDNPVKALGQQNMYVAL 32
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium
[TaxId: 1404]}
Length = 261
Score = 23.9 bits (51), Expect = 2.0
Identities = 3/19 (15%), Positives = 9/19 (47%)
Query: 9 TNVNTYAVHPGVVDTELSR 27
+ + PG ++T ++
Sbjct: 179 KGIRVNNIGPGAINTPINA 197
>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase
{Azoarcus sp. ebn1 [TaxId: 76114]}
Length = 247
Score = 24.1 bits (52), Expect = 2.1
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 9 TNVNTYAVHPGVVDTELSR 27
+ A+ P +V T +
Sbjct: 173 DGITVNAIAPSLVRTATTE 191
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 251
Score = 23.8 bits (51), Expect = 2.4
Identities = 5/35 (14%), Positives = 14/35 (40%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRV 43
+ + PG T+++ S ++ +R+
Sbjct: 177 YGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI 211
>d2bjqa2 b.169.1.1 (A:5-174) Sperm motility protein MFP2 {Pig
roundworm (Ascaris suum), isoform A [TaxId: 6253]}
Length = 170
Score = 23.6 bits (51), Expect = 2.4
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 38 WLYQRVGGLFIKSPLQ-GAQTTLYCAL 63
W Y +G F +P++ Q +Y AL
Sbjct: 6 WAYNTIGSPFPDNPVRVKGQQNMYVAL 32
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 236
Score = 24.0 bits (51), Expect = 2.4
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIPGTAW 38
+ AV P +DT ++R ++W
Sbjct: 165 SGAAAIAVLPVTLDTPMNRKSMPEADFSSW 194
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 255
Score = 23.8 bits (51), Expect = 2.6
Identities = 4/23 (17%), Positives = 10/23 (43%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDS 31
N+ + PG + T+ + +
Sbjct: 180 KNIRVNGIAPGAILTDALKSVIT 202
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura
stramonium), II [TaxId: 4076]}
Length = 259
Score = 23.8 bits (51), Expect = 2.9
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 9 TNVNTYAVHPGVVDTELSRHF 29
N+ V PGV+ T L
Sbjct: 179 DNIRVNGVGPGVIATSLVEMT 199
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 244
Score = 23.4 bits (50), Expect = 3.6
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 9 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRV 43
+ AV+P VV T + + S + R+
Sbjct: 170 HKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI 204
>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Nematode (Caenorhabditis elegans) [TaxId:
6239]}
Length = 235
Score = 23.3 bits (49), Expect = 4.2
Identities = 5/24 (20%), Positives = 12/24 (50%)
Query: 15 AVHPGVVDTELSRHFDSIIPGTAW 38
+ P +DT ++R + ++W
Sbjct: 171 TIMPVTLDTPMNRKWMPNADHSSW 194
>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 248
Score = 23.1 bits (48), Expect = 4.6
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 9 TNVNTYAVHPGVVDTELSRHF 29
+ ++HPG V T++
Sbjct: 191 QRIMCVSLHPGWVKTDMGGSS 211
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase
{Comamonas testosteroni [TaxId: 285]}
Length = 253
Score = 23.0 bits (49), Expect = 4.7
Identities = 3/21 (14%), Positives = 9/21 (42%)
Query: 9 TNVNTYAVHPGVVDTELSRHF 29
+ ++HP + T + +
Sbjct: 174 YAIRVNSIHPDGIYTPMMQAS 194
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 242
Score = 23.0 bits (49), Expect = 5.6
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 10 NVNTYAVHPGVVDTELSRHFDS 31
+ +V+P VV T++ + +
Sbjct: 169 KIRVNSVNPTVVLTDMGKKVSA 190
>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase
{Thermus thermophilus, TTHB020 [TaxId: 274]}
Length = 241
Score = 22.7 bits (48), Expect = 6.1
Identities = 4/20 (20%), Positives = 9/20 (45%)
Query: 10 NVNTYAVHPGVVDTELSRHF 29
V + PG++ T ++
Sbjct: 170 GVRVNVLLPGLIQTPMTAGL 189
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermus thermophilus [TaxId: 274]}
Length = 242
Score = 22.7 bits (48), Expect = 6.4
Identities = 3/21 (14%), Positives = 9/21 (42%)
Query: 10 NVNTYAVHPGVVDTELSRHFD 30
+ + PG ++T ++
Sbjct: 170 GIRVNTLAPGFIETRMTAKVP 190
>d1jb0f_ f.23.16.1 (F:) Subunit III of photosystem I reaction
centre, PsaF {Synechococcus elongatus [TaxId: 32046]}
Length = 141
Score = 22.4 bits (48), Expect = 6.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 20 VVDTELSRHFDSIIPGTAWLY 40
VVD LSR D +IP +LY
Sbjct: 52 VVDGRLSRAGDFLIPSVLFLY 72
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase
{Lactobacillus brevis [TaxId: 1580]}
Length = 251
Score = 22.3 bits (47), Expect = 8.0
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 9 TNVNTYAVHPGVVDTELSRHF 29
+V VHPG + T L
Sbjct: 178 YDVRVNTVHPGYIKTPLVDDL 198
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase
{Streptomyces coelicolor [TaxId: 1902]}
Length = 257
Score = 22.4 bits (47), Expect = 9.0
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 9 TNVNTYAVHPGVVDTELSRHFD 30
T + AV PG V+T ++
Sbjct: 174 TGITVNAVCPGFVETPMAASVR 195
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.136 0.420
Gapped
Lambda K H
0.267 0.0519 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 267,918
Number of extensions: 9041
Number of successful extensions: 60
Number of sequences better than 10.0: 1
Number of HSP's gapped: 59
Number of HSP's successfully gapped: 39
Length of query: 76
Length of database: 2,407,596
Length adjustment: 43
Effective length of query: 33
Effective length of database: 1,817,206
Effective search space: 59967798
Effective search space used: 59967798
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.4 bits)