Query psy6459
Match_columns 66
No_of_seqs 15 out of 17
Neff 1.8
Searched_HMMs 13730
Date Fri Aug 16 18:26:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6459.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6459hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2hkua2 a.121.1.1 (A:88-208) P 26.5 34 0.0025 21.3 3.5 37 3-39 41-77 (121)
2 d1le8a_ a.4.1.1 (A:) Mating ty 26.1 15 0.0011 18.5 1.5 26 39-64 7-32 (53)
3 d1twla_ b.40.5.1 (A:) Inorgani 20.6 23 0.0017 21.9 1.8 19 39-57 127-145 (173)
4 d2ecba1 a.4.1.1 (A:8-83) Zinc 20.3 22 0.0016 18.9 1.5 26 39-64 14-39 (76)
5 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 20.1 22 0.0016 19.2 1.4 25 39-63 27-55 (80)
6 d2h9da1 a.130.1.1 (A:1-94) Sal 19.9 28 0.002 19.0 1.9 52 13-65 30-81 (94)
7 d2dt6a1 a.217.1.1 (A:48-110) S 19.6 45 0.0032 17.4 2.7 30 2-31 3-32 (63)
8 d1p7ia_ a.4.1.1 (A:) Engrailed 19.5 24 0.0018 17.6 1.4 24 40-63 10-33 (53)
9 d2bnxa1 a.118.1.23 (A:133-475) 18.6 39 0.0029 21.9 2.7 22 35-56 71-92 (343)
10 d2prda_ b.40.5.1 (A:) Inorgani 18.6 33 0.0024 21.1 2.2 19 39-57 127-145 (174)
No 1
>d2hkua2 a.121.1.1 (A:88-208) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=26.50 E-value=34 Score=21.35 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=32.0
Q ss_pred hhHHHHHHHHhhhhhhhHHHHHHHhhhccCCchHHHH
Q psy6459 3 LLLEHLEALVSRHERSLRSTVVKRQAQNQSGVSSEAE 39 (66)
Q Consensus 3 llLehlE~Lvsrhe~Slr~Tv~krqa~s~~gvssEvE 39 (66)
++=+||+.|-++.|+-|-.|+++|.-+.-++.+-|..
T Consensus 41 li~~tL~~Lh~~geral~~~i~R~GW~~rrpidVEsr 77 (121)
T d2hkua2 41 LITDTLRTLHSSGEVALIRTLMRTGWQLRAGIDVESK 77 (121)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHTTCCCSSCHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcccccCCCcHHHH
Confidence 3457999999999999999999999988888887764
No 2
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.15 E-value=15 Score=18.49 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHhhHHhHhhhhhhhh
Q psy6459 39 EVLKALKSLFEHHKALDEKGKGTAFQ 64 (66)
Q Consensus 39 EVLkALksLFeHHKaLDEKv~~~l~~ 64 (66)
+.+..|...|+-+.-.|...++.|-.
T Consensus 7 ~q~~~Le~~F~~~~~P~~~~~~~LA~ 32 (53)
T d1le8a_ 7 QARAFLEQVFRRKQSLNSKEKEEVAK 32 (53)
T ss_dssp HHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 45778888899888888888877654
No 3
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]}
Probab=20.56 E-value=23 Score=21.89 Aligned_cols=19 Identities=26% Similarity=0.455 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHhhHHhHh
Q psy6459 39 EVLKALKSLFEHHKALDEK 57 (66)
Q Consensus 39 EVLkALksLFeHHKaLDEK 57 (66)
.+|+.++..|+|-|.++-|
T Consensus 127 ~~l~~I~~fF~~YK~~egK 145 (173)
T d1twla_ 127 AFLDEIAHFFKRYKELQGK 145 (173)
T ss_dssp HHHHHHHHHHHHTTGGGTC
T ss_pred HHHHHHHHHHHHcCCCCCC
Confidence 5799999999999999854
No 4
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.32 E-value=22 Score=18.88 Aligned_cols=26 Identities=19% Similarity=0.250 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhhHHhHhhhhhhhh
Q psy6459 39 EVLKALKSLFEHHKALDEKGKGTAFQ 64 (66)
Q Consensus 39 EVLkALksLFeHHKaLDEKv~~~l~~ 64 (66)
+-+.+|+..|+...-.|...++.|-.
T Consensus 14 ~Q~~~Le~~F~~~~~P~~~~r~~LA~ 39 (76)
T d2ecba1 14 EQLRVLQASFLNSSVLTDEELNRLRA 39 (76)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 46788899999999988888887744
No 5
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.07 E-value=22 Score=19.23 Aligned_cols=25 Identities=12% Similarity=0.061 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHh----hHHhHhhhhhhh
Q psy6459 39 EVLKALKSLFEHH----KALDEKGKGTAF 63 (66)
Q Consensus 39 EVLkALksLFeHH----KaLDEKv~~~l~ 63 (66)
+-+.+|++.||.- .-.|+..++.|-
T Consensus 27 ~Q~~~L~~~fe~~~~~~~~p~~~~~~~la 55 (80)
T d1wh7a_ 27 EQKEKMLAFAERLGWRIQKHDDVAVEQFC 55 (80)
T ss_dssp HHHHHHHHHHHHHTSCCCSSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCcCHHHHHHHH
Confidence 4577888899972 334555555553
No 6
>d2h9da1 a.130.1.1 (A:1-94) Salicylate biosynthesis protein PchB {Pseudomonas aeruginosa [TaxId: 287]}
Probab=19.85 E-value=28 Score=18.97 Aligned_cols=52 Identities=15% Similarity=0.079 Sum_probs=26.4
Q ss_pred hhhhhhhHHHHHHHhhhccCCchHHHHHHHHHHHHHHHhhHHhHhhhhhhhhc
Q psy6459 13 SRHERSLRSTVVKRQAQNQSGVSSEAEVLKALKSLFEHHKALDEKGKGTAFQK 65 (66)
Q Consensus 13 srhe~Slr~Tv~krqa~s~~gvssEvEVLkALksLFeHHKaLDEKv~~~l~~~ 65 (66)
.|-.-+-...-.|.+..+.---..|-+|++.+....+ ...||+..-+++|+-
T Consensus 30 ~R~~l~~~i~~~K~~~~~v~d~~Re~~vl~~~~~~a~-~~gl~~~~i~~i~~~ 81 (94)
T d2h9da1 30 RRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAE-ENGLDAPFVEGLFAQ 81 (94)
T ss_dssp HHHHHHHHTTTC----------CHHHHHHHHHHHHHH-HTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHcCCCCcHHHHHHHHHHHHHHHh-hCCcCHHHHHHHHHH
Confidence 3333333333344333322233458999999987754 346788777777763
No 7
>d2dt6a1 a.217.1.1 (A:48-110) Splicing factor 3 subunit 1, SF3A1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.62 E-value=45 Score=17.35 Aligned_cols=30 Identities=10% Similarity=0.279 Sum_probs=25.3
Q ss_pred hhhHHHHHHHHhhhhhhhHHHHHHHhhhcc
Q psy6459 2 VLLLEHLEALVSRHERSLRSTVVKRQAQNQ 31 (66)
Q Consensus 2 rllLehlE~Lvsrhe~Slr~Tv~krqa~s~ 31 (66)
|-+++.+-..|+++-++....+..|+..+|
T Consensus 3 ~~iI~~tA~fVak~G~~fE~~l~~~e~~np 32 (63)
T d2dt6a1 3 RNIVDKTASFVARNGPEFEARIRQNEINNP 32 (63)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHHHSTTCG
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHhccCCC
Confidence 456778888899999999999999988876
No 8
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=19.48 E-value=24 Score=17.56 Aligned_cols=24 Identities=25% Similarity=0.317 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhHHhHhhhhhhh
Q psy6459 40 VLKALKSLFEHHKALDEKGKGTAF 63 (66)
Q Consensus 40 VLkALksLFeHHKaLDEKv~~~l~ 63 (66)
-+.+|...|+..+-.|...++.|-
T Consensus 10 Q~~~Le~~F~~~~yp~~~~r~~LA 33 (53)
T d1p7ia_ 10 QLARLKREFNENRYLTERRRQQLS 33 (53)
T ss_dssp HHHHHHHHHHHCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHH
Confidence 567888999988888887777664
No 9
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=18.63 E-value=39 Score=21.90 Aligned_cols=22 Identities=14% Similarity=0.445 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHHHHhhHHhH
Q psy6459 35 SSEAEVLKALKSLFEHHKALDE 56 (66)
Q Consensus 35 ssEvEVLkALksLFeHHKaLDE 56 (66)
..|.++++.||.|......++.
T Consensus 71 ~~e~e~l~CLkalmn~~~G~~~ 92 (343)
T d2bnxa1 71 RNQHEIIRCLKAFMNNKFGIKT 92 (343)
T ss_dssp HHHHHHHHHHHHHTSSHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHH
Confidence 3588999999999887777665
No 10
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]}
Probab=18.59 E-value=33 Score=21.13 Aligned_cols=19 Identities=37% Similarity=0.557 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHhhHHhHh
Q psy6459 39 EVLKALKSLFEHHKALDEK 57 (66)
Q Consensus 39 EVLkALksLFeHHKaLDEK 57 (66)
.+++.++..|+|-|.|+.|
T Consensus 127 ~~l~~I~~fF~~YK~le~k 145 (174)
T d2prda_ 127 GVKQEIQHFFETYKALEAK 145 (174)
T ss_dssp HHHHHHHHHHHHTTGGGGG
T ss_pred HHHHHHHHHHHHHcCCcCC
Confidence 5789999999999999864
Done!