BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6460
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q05825|ATPB_DROME ATP synthase subunit beta, mitochondrial OS=Drosophila melanogaster
GN=ATPsyn-beta PE=2 SV=3
Length = 505
Score = 329 bits (843), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 167/198 (84%), Positives = 172/198 (86%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 306 VGYQPTLATDMGSMQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 364
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
AIAELGIYPAVDPLDSTSRIMDPNIIG EHYN+ARGVQKILQDYKSLQDIIAILGMDELS
Sbjct: 365 AIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELS 424
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLE+TIKGFS ILAG YDHLPEVAF
Sbjct: 425 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAF 484
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVGPIEEVV KA+ LAK
Sbjct: 485 YMVGPIEEVVEKADRLAK 502
>sp|Q5ZLC5|ATPB_CHICK ATP synthase subunit beta, mitochondrial OS=Gallus gallus GN=ATP5B
PE=1 SV=1
Length = 533
Score = 320 bits (821), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/197 (81%), Positives = 168/197 (85%), Gaps = 12/197 (6%)
Query: 13 IGYQPD------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSRA 60
+GYQP R QAIYVPADDLTDPAPATTFAHLDATTVLSRA
Sbjct: 334 VGYQPTLATDMGTMQERITTTRKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRA 393
Query: 61 IAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELSE 120
IAELGIYPAVDPLDSTSRIMDPNI+G EHY++ARGVQKILQDYKSLQDIIAILGMDELSE
Sbjct: 394 IAELGIYPAVDPLDSTSRIMDPNIVGPEHYDVARGVQKILQDYKSLQDIIAILGMDELSE 453
Query: 121 EDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAFY 180
EDKLTVARARKIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFY
Sbjct: 454 EDKLTVARARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFKQILAGEYDHLPEQAFY 513
Query: 181 MVGPIEEVVAKAETLAK 197
MVGPIEE VAKAE LA+
Sbjct: 514 MVGPIEEAVAKAEKLAE 530
>sp|P10719|ATPB_RAT ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus
GN=Atp5b PE=1 SV=2
Length = 529
Score = 320 bits (819), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/198 (80%), Positives = 171/198 (86%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 329 VGYQPTLATDMGTMQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 387
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
AIAELGIYPAVDPLDSTSRIMDPNI+G+EHY++ARGVQKILQDYKSLQDIIAILGMDELS
Sbjct: 388 AIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELS 447
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTV+RARKIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG YDHLPE AF
Sbjct: 448 EEDKLTVSRARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGDYDHLPEQAF 507
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVGPIEE VAKA+ LA+
Sbjct: 508 YMVGPIEEAVAKADKLAE 525
>sp|P00829|ATPB_BOVIN ATP synthase subunit beta, mitochondrial OS=Bos taurus GN=ATP5B
PE=1 SV=2
Length = 528
Score = 319 bits (818), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/198 (80%), Positives = 172/198 (86%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 329 VGYQPTLATDMGTMQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 387
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
AIAELGIYPAVDPLDSTSRIMDPNI+G+EHY++ARGVQKILQDYKSLQDIIAILGMDELS
Sbjct: 388 AIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELS 447
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTV+RARKIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AF
Sbjct: 448 EEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAF 507
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVGPIEE VAKA+ LA+
Sbjct: 508 YMVGPIEEAVAKADKLAE 525
>sp|P06576|ATPB_HUMAN ATP synthase subunit beta, mitochondrial OS=Homo sapiens GN=ATP5B
PE=1 SV=3
Length = 529
Score = 319 bits (818), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 160/198 (80%), Positives = 172/198 (86%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 329 VGYQPTLATDMGTMQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 387
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
AIAELGIYPAVDPLDSTSRIMDPNI+G+EHY++ARGVQKILQDYKSLQDIIAILGMDELS
Sbjct: 388 AIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELS 447
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTV+RARKIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AF
Sbjct: 448 EEDKLTVSRARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAF 507
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVGPIEE VAKA+ LA+
Sbjct: 508 YMVGPIEEAVAKADKLAE 525
>sp|P56480|ATPB_MOUSE ATP synthase subunit beta, mitochondrial OS=Mus musculus GN=Atp5b
PE=1 SV=2
Length = 529
Score = 319 bits (817), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/198 (80%), Positives = 171/198 (86%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 329 VGYQPTLATDMGTMQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 387
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
AIAELGIYPAVDPLDSTSRIMDPNI+G EHY++ARGVQKILQDYKSLQDIIAILGMDELS
Sbjct: 388 AIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQDIIAILGMDELS 447
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTV+RARKIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AF
Sbjct: 448 EEDKLTVSRARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAF 507
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVGPIEE VAKA+ LA+
Sbjct: 508 YMVGPIEEAVAKADKLAE 525
>sp|Q9PTY0|ATPB_CYPCA ATP synthase subunit beta, mitochondrial OS=Cyprinus carpio
GN=atp5b PE=2 SV=1
Length = 518
Score = 313 bits (802), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/198 (80%), Positives = 169/198 (85%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 319 VGYQPTLATDMGTMQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 377
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
AIAELGIYPAVDPLDSTSRIMDPNI+G+EHY++ARGVQKILQDYKSLQDIIAILGMDELS
Sbjct: 378 AIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELS 437
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTVARARKIQRFLSQPFQVAEVFTGH GKLVPL++TIKGF IL G+YD LPE AF
Sbjct: 438 EEDKLTVARARKIQRFLSQPFQVAEVFTGHLGKLVPLKDTIKGFKAILGGEYDALPEQAF 497
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVGPIEEVV KAE LA+
Sbjct: 498 YMVGPIEEVVQKAEKLAE 515
>sp|P46561|ATPB_CAEEL ATP synthase subunit beta, mitochondrial OS=Caenorhabditis elegans
GN=atp-2 PE=1 SV=2
Length = 538
Score = 299 bits (765), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/198 (76%), Positives = 162/198 (81%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 338 VGYQPTLATDMGSMQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 396
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
IAEL IYPAVDPLDSTSRIMDPN++G HY+IARGVQKILQDYKSLQDIIAILGMDELS
Sbjct: 397 GIAELAIYPAVDPLDSTSRIMDPNVVGQNHYDIARGVQKILQDYKSLQDIIAILGMDELS 456
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTV+RARKIQRFLSQPFQVAEVFTGH GK V LEETI+GF+ IL G+ DHLPEVAF
Sbjct: 457 EEDKLTVSRARKIQRFLSQPFQVAEVFTGHQGKFVSLEETIRGFTMILKGELDHLPEVAF 516
Query: 180 YMVGPIEEVVAKAETLAK 197
YM G I++V KAE LAK
Sbjct: 517 YMQGGIDDVFKKAEELAK 534
>sp|P38482|ATPBM_CHLRE ATP synthase subunit beta, mitochondrial OS=Chlamydomonas
reinhardtii GN=ATP2 PE=1 SV=1
Length = 574
Score = 294 bits (752), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/168 (85%), Positives = 155/168 (92%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QA+YVPADDLTDPAPATTFAHLDATTVLSR+IAELGIYPAVDPLDSTSR+++PNIIGAEH
Sbjct: 337 QAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLNPNIIGAEH 396
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
YNIARGVQK+LQDYK+LQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTG
Sbjct: 397 YNIARGVQKVLQDYKNLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGT 456
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLAK 197
GK V L++TI F+ IL GKYD LPE+AFYMVG I EVV KA+ LAK
Sbjct: 457 PGKYVDLKDTISAFTGILQGKYDDLPEMAFYMVGGIHEVVEKADKLAK 504
>sp|Q0QEP2|ATPB_MESAU ATP synthase subunit beta, mitochondrial (Fragment) OS=Mesocricetus
auratus GN=ATP5B PE=1 SV=1
Length = 362
Score = 291 bits (745), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/182 (79%), Positives = 156/182 (85%), Gaps = 14/182 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 182 VGYQPTLATDMGTMQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 240
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
AIAELGIYPAVDPLDSTSRIMDPNI+G EHY++ARGVQKILQDYKSLQDIIAILGMDELS
Sbjct: 241 AIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQDIIAILGMDELS 300
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTV+RARKIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF ++LAG YDHLPE A+
Sbjct: 301 EEDKLTVSRARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQMLAGDYDHLPEQAY 360
Query: 180 YM 181
Y+
Sbjct: 361 YI 362
>sp|Q4FP38|ATPB_PELUB ATP synthase subunit beta OS=Pelagibacter ubique (strain HTCC1062)
GN=atpD PE=3 SV=1
Length = 472
Score = 285 bits (728), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/197 (74%), Positives = 158/197 (80%), Gaps = 12/197 (6%)
Query: 13 IGYQP-------DCLKRFSI-----FLPAQAIYVPADDLTDPAPATTFAHLDATTVLSRA 60
+GYQP + +R + QAIYVPADDLTDPAPAT+FAHLDATTVLSR
Sbjct: 272 VGYQPTLATDMGNLQERITTTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQ 331
Query: 61 IAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELSE 120
IAE+GIYPAVDPLDSTSRI+DP I+G EHY +AR VQKILQ YKSLQDIIAILGMDELSE
Sbjct: 332 IAEIGIYPAVDPLDSTSRILDPRIVGDEHYRVAREVQKILQTYKSLQDIIAILGMDELSE 391
Query: 121 EDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAFY 180
EDKLTVARARKIQRFLSQPF VAEVFTG GKLV LE TIKGF+ I G+YDHLPE AFY
Sbjct: 392 EDKLTVARARKIQRFLSQPFFVAEVFTGSPGKLVDLESTIKGFAAICNGEYDHLPEAAFY 451
Query: 181 MVGPIEEVVAKAETLAK 197
MVG IEE V KAE +AK
Sbjct: 452 MVGTIEEAVEKAEKMAK 468
>sp|Q162S9|ATPB_ROSDO ATP synthase subunit beta OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=atpD PE=3 SV=1
Length = 474
Score = 284 bits (726), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/167 (82%), Positives = 150/167 (89%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QA+YVPADDLTDPAPAT+FAHLDATTVLSRAI+ELGIYPAVDPLDSTSR+MDP ++G EH
Sbjct: 304 QAVYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPQVLGEEH 363
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
YN+AR VQ ILQ YKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPF VA+VFTG
Sbjct: 364 YNVARDVQGILQRYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVFTGS 423
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
GK VPL ETI+ F ++AG+YDHLPE AFYMVG IEEV AKAE +A
Sbjct: 424 DGKQVPLAETIESFKAVVAGEYDHLPEGAFYMVGGIEEVKAKAEQMA 470
>sp|Q25117|ATPB_HEMPU ATP synthase subunit beta, mitochondrial OS=Hemicentrotus
pulcherrimus PE=2 SV=1
Length = 523
Score = 284 bits (726), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/198 (72%), Positives = 160/198 (80%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 324 VGYQPTLATDMGTMQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 382
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
IAELGIYPAVDPLDS+SRIMDPN++G HY+IARGVQKILQD K+LQDIIAILGMDELS
Sbjct: 383 GIAELGIYPAVDPLDSSSRIMDPNVVGERHYSIARGVQKILQDNKTLQDIIAILGMDELS 442
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DKLTV+RARKIQRFLSQPFQVAEVFTG GKLV + ETI GF I+ G+ DHLPE+AF
Sbjct: 443 EDDKLTVSRARKIQRFLSQPFQVAEVFTGSPGKLVSMAETIDGFESIIKGECDHLPEIAF 502
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVG I++V KA+ LA+
Sbjct: 503 YMVGNIQDVKDKADRLAE 520
>sp|B0THN2|ATPB_HELMI ATP synthase subunit beta OS=Heliobacterium modesticaldum (strain
ATCC 51547 / Ice1) GN=atpD PE=3 SV=1
Length = 471
Score = 281 bits (720), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/167 (81%), Positives = 150/167 (89%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPAT FAHLDATTVLSRAIAELGIYPAVDPLDSTSRI+DP+++G EH
Sbjct: 305 QAIYVPADDLTDPAPATAFAHLDATTVLSRAIAELGIYPAVDPLDSTSRILDPHVVGDEH 364
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
Y++ARGVQKILQ YK LQDIIAILGMDELSE+DK+ VARARKIQRFLSQPF VAE FTG
Sbjct: 365 YSVARGVQKILQRYKELQDIIAILGMDELSEDDKIVVARARKIQRFLSQPFHVAEAFTGT 424
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
GK VPL+E+I+GF EIL GK+D LPE AFYMVG IEE VAKA+ +A
Sbjct: 425 PGKFVPLKESIRGFKEILEGKHDDLPESAFYMVGTIEEAVAKAKEMA 471
>sp|A4WUM7|ATPB_RHOS5 ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=atpD PE=3 SV=1
Length = 475
Score = 281 bits (719), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/167 (81%), Positives = 149/167 (89%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPAT+FAHLDATTVLSRAI+ELGIYPAVDPLDSTSRI+DP I+G EH
Sbjct: 305 QAIYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIVGEEH 364
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
YN+AR VQ ILQ YKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPF VA+VFTG
Sbjct: 365 YNVARAVQGILQRYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVFTGS 424
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
G VPLE+TI F ++ G+YDHLPE AFYMVG IE+V+AKA+ LA
Sbjct: 425 DGVQVPLEKTIASFKAVVNGEYDHLPEAAFYMVGDIEDVIAKAQRLA 471
>sp|Q3J431|ATPB1_RHOS4 ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpD1 PE=3 SV=1
Length = 475
Score = 280 bits (717), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 149/167 (89%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPAT+FAHLDATTVLSRAI+ELGIYPAVDPLDSTSRI+DP I+G EH
Sbjct: 305 QAIYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIVGEEH 364
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
YN+AR VQ ILQ YKSLQDIIAILGMDELSEEDKL+VARARKIQRFLSQPF VA+VFTG
Sbjct: 365 YNVARAVQGILQRYKSLQDIIAILGMDELSEEDKLSVARARKIQRFLSQPFDVAKVFTGS 424
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
G VPLE+TI F ++ G+YDHLPE AFYMVG IE+V+AKA+ LA
Sbjct: 425 DGVQVPLEKTIASFKAVVNGEYDHLPEAAFYMVGDIEDVIAKAQRLA 471
>sp|A3PIB9|ATPB1_RHOS1 ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=atpD1 PE=3 SV=1
Length = 475
Score = 280 bits (717), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 149/167 (89%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPAT+FAHLDATTVLSRAI+ELGIYPAVDPLDSTSRI+DP I+G EH
Sbjct: 305 QAIYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIVGEEH 364
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
YN+AR VQ ILQ YKSLQDIIAILGMDELSEEDKL+VARARKIQRFLSQPF VA+VFTG
Sbjct: 365 YNVARAVQGILQRYKSLQDIIAILGMDELSEEDKLSVARARKIQRFLSQPFDVAKVFTGS 424
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
G VPLE+TI F ++ G+YDHLPE AFYMVG IE+V+AKA+ LA
Sbjct: 425 DGVQVPLEKTIASFKAVVNGEYDHLPEAAFYMVGDIEDVIAKAQRLA 471
>sp|P19023|ATPBM_MAIZE ATP synthase subunit beta, mitochondrial OS=Zea mays GN=ATPB PE=2
SV=1
Length = 553
Score = 280 bits (716), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 140/198 (70%), Positives = 160/198 (80%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 353 VGYQPTLATDLGGLQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 411
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
I+ELGIYPAVDPLDSTSR++ P+++G +HYN ARGVQK+LQ+YK+LQDIIAILGMDELS
Sbjct: 412 QISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELS 471
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DKLTVARARKIQRFLSQPF VAEVFTG GK V L+E++K F +L GKYD LPE +F
Sbjct: 472 EDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKESVKSFQGVLDGKYDDLPEQSF 531
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVG IEEV+AKAE +AK
Sbjct: 532 YMVGGIEEVIAKAEKIAK 549
>sp|Q5LNP1|ATPB_RUEPO ATP synthase subunit beta OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=atpD PE=3 SV=1
Length = 474
Score = 279 bits (714), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/167 (80%), Positives = 149/167 (89%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QA+YVPADDLTDPAPATTFAHLDATTVLSRAI+ELGIYPAVDPLDS+SRI+DP ++G EH
Sbjct: 304 QAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRILDPQVVGEEH 363
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
Y +AR VQ ILQ YKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPF VA+VFTG
Sbjct: 364 YQVARDVQGILQRYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVFTGS 423
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
G VPLE+TI F ++AG+YDHLPE AFYMVG I+EV+AKAE +A
Sbjct: 424 DGVQVPLEDTISSFKAVVAGEYDHLPEGAFYMVGGIDEVIAKAERMA 470
>sp|A8LJR4|ATPB2_DINSH ATP synthase subunit beta 2 OS=Dinoroseobacter shibae (strain DFL
12) GN=atpD2 PE=3 SV=1
Length = 474
Score = 279 bits (713), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/167 (80%), Positives = 149/167 (89%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QA+YVPADDLTDPAPATTFAHLDATTVLSRAI+ELGIYPAVDPLDS+SRI+DP I+G EH
Sbjct: 304 QAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRILDPGIVGEEH 363
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
Y +AR VQ ILQ YKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPF VA+VFTG
Sbjct: 364 YQVARDVQGILQRYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVFTGS 423
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
G VP+E+TI F ++AG+YDHLPE AFYMVG I+EV+AKAE +A
Sbjct: 424 DGVQVPIEDTISSFKAVVAGEYDHLPEGAFYMVGGIDEVIAKAERMA 470
>sp|A1B8P0|ATPB_PARDP ATP synthase subunit beta OS=Paracoccus denitrificans (strain Pd
1222) GN=atpD PE=3 SV=1
Length = 474
Score = 278 bits (711), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 148/167 (88%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QA+YVPADDLTDPAPATTFAHLDATTVLSRAI+ELGIYPAVDPLDS SRI+DP ++G EH
Sbjct: 304 QAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRILDPAVVGEEH 363
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
Y +AR VQ ILQ YKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPF VA+VFTG
Sbjct: 364 YQVARDVQGILQKYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVFTGS 423
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
G VPLE+TIK F ++AG+YDHLPE AFYMVG IE+V AKA+ LA
Sbjct: 424 DGVQVPLEDTIKSFKAVVAGEYDHLPEAAFYMVGGIEDVKAKAQRLA 470
>sp|Q28TJ6|ATPB_JANSC ATP synthase subunit beta OS=Jannaschia sp. (strain CCS1) GN=atpD
PE=3 SV=1
Length = 474
Score = 278 bits (710), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/197 (72%), Positives = 157/197 (79%), Gaps = 14/197 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP KR SI QA+YVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 275 VGYQPTLATDMGTMQERITSTKRGSI-TSIQAVYVPADDLTDPAPATTFAHLDATTVLSR 333
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
AI+ELGIYPAVDPLDS+SR+MDP I+G EHY +AR VQ ILQ YKSLQDIIAILGMDELS
Sbjct: 334 AISELGIYPAVDPLDSSSRLMDPTIVGDEHYQVARDVQGILQRYKSLQDIIAILGMDELS 393
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTVARARKIQRFLSQPF VA+VFTG G V LE+TI F ++AG+YDHLPE AF
Sbjct: 394 EEDKLTVARARKIQRFLSQPFDVAKVFTGSDGIQVQLEDTISSFKAVVAGEYDHLPEGAF 453
Query: 180 YMVGPIEEVVAKAETLA 196
YMVG I+EV+AKAE +A
Sbjct: 454 YMVGGIDEVIAKAEKMA 470
>sp|Q01859|ATPBM_ORYSJ ATP synthase subunit beta, mitochondrial OS=Oryza sativa subsp.
japonica GN=ATPB PE=1 SV=2
Length = 552
Score = 277 bits (709), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/198 (70%), Positives = 159/198 (80%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 352 VGYQPTLATDLGGLQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 410
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
I+ELGIYPAVDPLDSTSR++ P+++G +HYN ARGVQK+LQ+YK+LQDIIAILGMDELS
Sbjct: 411 QISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELS 470
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DKLTVARARKIQRFLSQPF VAEVFTG GK V L+E++ F +L GKYD LPE +F
Sbjct: 471 EDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKESVNSFQGVLDGKYDDLPEQSF 530
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVG IEEV+AKAE +AK
Sbjct: 531 YMVGGIEEVIAKAEKIAK 548
>sp|A7H1I1|ATPB_CAMJD ATP synthase subunit beta OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=atpD PE=3
SV=1
Length = 484
Score = 276 bits (707), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 138/195 (70%), Positives = 151/195 (77%), Gaps = 12/195 (6%)
Query: 13 IGYQPDCLKRFSIF------------LPAQAIYVPADDLTDPAPATTFAHLDATTVLSRA 60
+GYQP F QA+YVPADDLTDPAPAT FAHLDATTVL+RA
Sbjct: 269 VGYQPTLASEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRA 328
Query: 61 IAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELSE 120
IAE GIYPAVDPLDSTSR++DPNIIG EHY +ARGVQ +LQ YK LQDIIAILGMDELSE
Sbjct: 329 IAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSE 388
Query: 121 EDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAFY 180
EDKL V RARKI++FLSQPF VAEVFTG GK + LE+TI GF IL GKYDHLPE AFY
Sbjct: 389 EDKLVVERARKIEKFLSQPFFVAEVFTGSPGKYINLEDTIAGFKGILEGKYDHLPENAFY 448
Query: 181 MVGPIEEVVAKAETL 195
MVG I+E +AKAETL
Sbjct: 449 MVGNIDEAIAKAETL 463
>sp|B3EDQ7|ATPB_CHLL2 ATP synthase subunit beta OS=Chlorobium limicola (strain DSM 245 /
NBRC 103803) GN=atpD PE=3 SV=1
Length = 462
Score = 276 bits (705), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 134/166 (80%), Positives = 149/166 (89%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPAT FAHLDATTVLSR+IAELGIYPAVDPLDSTSRI+DPNI+G +H
Sbjct: 297 QAIYVPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDH 356
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
YN A+ V++ILQ YK LQDIIAILGMDELS+EDKL V+RARK+QRFLSQPF VAE FTG
Sbjct: 357 YNTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQRFLSQPFFVAEAFTGL 416
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETL 195
AGK V LEETIKGF EI+AGK+D+LPE AFY+VG IEE V KA+TL
Sbjct: 417 AGKYVKLEETIKGFKEIIAGKHDNLPENAFYLVGTIEEAVEKAKTL 462
>sp|P29685|ATPBM_HEVBR ATP synthase subunit beta, mitochondrial OS=Hevea brasiliensis
GN=ATPB PE=2 SV=1
Length = 562
Score = 276 bits (705), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 140/198 (70%), Positives = 159/198 (80%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 362 VGYQPTLATDLGGLQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 420
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
I+ELGIYPAVDPLDSTSR++ P+I+G EHYN ARGVQK+LQ+YK+LQDIIAILGMDELS
Sbjct: 421 QISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELS 480
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DKLTVARARKIQRFLSQPF VAEVFTG GK V L+E+I F +L GKYD LPE +F
Sbjct: 481 EDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKESITSFQGVLDGKYDDLPEQSF 540
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVG I+EV+AKA+ +AK
Sbjct: 541 YMVGGIDEVIAKADKIAK 558
>sp|Q2RFX9|ATPB_MOOTA ATP synthase subunit beta OS=Moorella thermoacetica (strain ATCC
39073) GN=atpD PE=1 SV=1
Length = 462
Score = 276 bits (705), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/196 (70%), Positives = 154/196 (78%), Gaps = 14/196 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 267 VGYQPTLATEMGALQERITSTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 325
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
IAELGIYPAVDPLDSTSRI+DP ++G EHY +ARGVQ++LQ YK LQDIIAILGMDELS
Sbjct: 326 QIAELGIYPAVDPLDSTSRILDPRVLGEEHYQVARGVQQVLQRYKELQDIIAILGMDELS 385
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKL VARARKIQRFLSQPF VAE FTG G VPL+ETI+GF EIL G++D+LPE AF
Sbjct: 386 EEDKLIVARARKIQRFLSQPFHVAEAFTGQPGVYVPLKETIRGFKEILEGRHDNLPEQAF 445
Query: 180 YMVGPIEEVVAKAETL 195
YMVG I+E V K + L
Sbjct: 446 YMVGTIDEAVKKGQEL 461
>sp|Q11DD5|ATPB_MESSB ATP synthase subunit beta OS=Mesorhizobium sp. (strain BNC1)
GN=atpD PE=3 SV=1
Length = 519
Score = 275 bits (704), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/167 (79%), Positives = 148/167 (88%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPAT+FAHLDATTVLSRAI+E GIYPAVDPLDSTSR++DP I+G EH
Sbjct: 349 QAIYVPADDLTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRMLDPQIVGEEH 408
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
Y +AR VQ+ LQ YKSLQDIIAILGMDELSEEDKLTVARARKI+RFLSQPF VAEVFTG
Sbjct: 409 YQVARAVQQTLQRYKSLQDIIAILGMDELSEEDKLTVARARKIERFLSQPFFVAEVFTGS 468
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
GKLV L++TIKGF ++ G+YDHLPE AFYMVG IE+ + KAE LA
Sbjct: 469 PGKLVDLQDTIKGFKGLVEGEYDHLPEAAFYMVGTIEDAIEKAERLA 515
>sp|A1AP52|ATPB2_PELPD ATP synthase subunit beta 2 OS=Pelobacter propionicus (strain DSM
2379) GN=atpD2 PE=3 SV=1
Length = 471
Score = 275 bits (704), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/197 (74%), Positives = 153/197 (77%), Gaps = 14/197 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K SI QAIYVPADDLTDPAPAT FAHLDATTVLSR
Sbjct: 274 VGYQPTLATEMGELQERITSTKNGSI-TSVQAIYVPADDLTDPAPATAFAHLDATTVLSR 332
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
IAELGIYPAVDPLDSTSRI+DP IIG EHY IAR VQ ILQ YK LQDIIAILGMDELS
Sbjct: 333 QIAELGIYPAVDPLDSTSRILDPQIIGEEHYAIARQVQYILQKYKDLQDIIAILGMDELS 392
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKL VARARKIQRFLSQPF VAEVFTG GK V L++TIKGF EI++GK+DHLPE AF
Sbjct: 393 EEDKLIVARARKIQRFLSQPFFVAEVFTGSPGKYVELKDTIKGFQEIVSGKHDHLPEQAF 452
Query: 180 YMVGPIEEVVAKAETLA 196
YMVG IEE V KA LA
Sbjct: 453 YMVGSIEEAVEKAAKLA 469
>sp|P43395|ATPBM_ACTDE ATP synthase subunit beta, mitochondrial (Fragment) OS=Actinidia
deliciosa GN=ATPB PE=2 SV=1
Length = 173
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/168 (79%), Positives = 150/168 (89%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPATTFAHLDATTVLSR I+ELGIYPAVDPLDSTSR++ P+I+G EH
Sbjct: 2 QAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEH 61
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
YN ARGVQK+LQ+YK+LQDIIAILGMDELSE+DKLTVARARKIQRFLSQPF VAEVFTG
Sbjct: 62 YNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 121
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLAK 197
GK V L+E+I F +L GK+D LPE +FYMVG IEEV+AKAE ++K
Sbjct: 122 PGKYVDLKESITSFQGVLDGKFDDLPEQSFYMVGGIEEVIAKAEKISK 169
>sp|A1ALL7|ATPB1_PELPD ATP synthase subunit beta 1 OS=Pelobacter propionicus (strain DSM
2379) GN=atpD1 PE=3 SV=1
Length = 471
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/197 (73%), Positives = 153/197 (77%), Gaps = 14/197 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K SI QAIYVPADDLTDPAPAT FAHLDATTVLSR
Sbjct: 274 VGYQPTLATEMGELQERITSTKNGSI-TSVQAIYVPADDLTDPAPATAFAHLDATTVLSR 332
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
IAELGIYPAVDPLDSTSRI+DP +IG EHY IAR VQ ILQ YK LQDIIAILGMDELS
Sbjct: 333 QIAELGIYPAVDPLDSTSRILDPQVIGEEHYAIARQVQYILQKYKDLQDIIAILGMDELS 392
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKL VARARKIQRFLSQPF VAEVFTG GK V L++TIKGF EI++GK+DHLPE AF
Sbjct: 393 EEDKLIVARARKIQRFLSQPFFVAEVFTGSPGKYVELKDTIKGFQEIVSGKHDHLPEQAF 452
Query: 180 YMVGPIEEVVAKAETLA 196
YMVG IEE V KA LA
Sbjct: 453 YMVGSIEEAVEKAAKLA 469
>sp|A9H9A8|ATPB_GLUDA ATP synthase subunit beta OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=atpD PE=3 SV=1
Length = 493
Score = 274 bits (701), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/199 (68%), Positives = 157/199 (78%), Gaps = 14/199 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QA+YVPADDLTDPAPA TFAHLDATTVL+R
Sbjct: 295 VGYQPTLATEMGALQERITSTKKGSI-TSVQAVYVPADDLTDPAPAATFAHLDATTVLNR 353
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
+IAE+GIYPAVDPLDSTSR +DP I+G EHY +AR VQ+ILQ YKSLQDIIAILGMDELS
Sbjct: 354 SIAEMGIYPAVDPLDSTSRSLDPKIVGEEHYQVARDVQRILQTYKSLQDIIAILGMDELS 413
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DK VARAR+IQRFLSQPF VAEVFTG GKLV LE+T++ F I+AG+YDHLPE AF
Sbjct: 414 EDDKQVVARARRIQRFLSQPFHVAEVFTGAPGKLVSLEDTVRSFKAIVAGEYDHLPEGAF 473
Query: 180 YMVGPIEEVVAKAETLAKS 198
YMVG IEE VAKAE + ++
Sbjct: 474 YMVGSIEEAVAKAEKMKET 492
>sp|Q9C5A9|ATPBO_ARATH ATP synthase subunit beta-3, mitochondrial OS=Arabidopsis thaliana
GN=At5g08680 PE=2 SV=1
Length = 559
Score = 274 bits (701), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/198 (70%), Positives = 157/198 (79%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 359 VGYQPTLASDLGALQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 417
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
I+ELGIYPAVDPLDSTSR++ P+I+G EHYN ARGVQK+LQ+YK+LQDIIAILGMDELS
Sbjct: 418 QISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELS 477
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DKLTVARARKIQRFLSQPF VAE+FTG GK V L+E I F +L GKYD L E +F
Sbjct: 478 EDDKLTVARARKIQRFLSQPFHVAEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSF 537
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVG I+EVVAKAE +AK
Sbjct: 538 YMVGGIDEVVAKAEKIAK 555
>sp|B3EA01|ATPB_GEOLS ATP synthase subunit beta OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=atpD PE=3 SV=1
Length = 471
Score = 274 bits (700), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/197 (71%), Positives = 153/197 (77%), Gaps = 14/197 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPAT FAHLDATTVLSR
Sbjct: 274 VGYQPTLATEMGELQERITSTKKGSI-TSVQAIYVPADDLTDPAPATAFAHLDATTVLSR 332
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
IAELGIYPAVDPLDSTSRI+DP +IG EHY +AR VQ +LQ YK LQDIIAILGMDELS
Sbjct: 333 QIAELGIYPAVDPLDSTSRILDPQVIGEEHYAVARSVQYVLQKYKDLQDIIAILGMDELS 392
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKL VARARKIQRFLSQPF VAE FTG GK V L++TIKGF EI+AGK+D+LPE AF
Sbjct: 393 EEDKLVVARARKIQRFLSQPFHVAEAFTGSPGKYVELKDTIKGFQEIVAGKHDNLPEQAF 452
Query: 180 YMVGPIEEVVAKAETLA 196
YMVG IEE + KA LA
Sbjct: 453 YMVGSIEEAIEKAAKLA 469
>sp|Q1GEU8|ATPB_RUEST ATP synthase subunit beta OS=Ruegeria sp. (strain TM1040) GN=atpD
PE=3 SV=1
Length = 474
Score = 274 bits (700), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/167 (79%), Positives = 148/167 (88%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QA+YVPADDLTDPAPATTFAHLDATTVL+RAI+ELGIYPAVDPLDS+SR+MDP I+G EH
Sbjct: 304 QAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEEH 363
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
Y +A VQ+ILQ YKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPF VA+VFTG
Sbjct: 364 YKVASDVQQILQRYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVFTGS 423
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
G V LE+TI F ++AG+YDHLPE AFYMVG I+EV+AKAE +A
Sbjct: 424 DGVQVSLEDTIASFKAVVAGEYDHLPEGAFYMVGGIDEVIAKAEKMA 470
>sp|Q1RKD7|ATPB_RICBR ATP synthase subunit beta OS=Rickettsia bellii (strain RML369-C)
GN=atpD PE=3 SV=1
Length = 473
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/196 (71%), Positives = 153/196 (78%), Gaps = 14/196 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K SI QAIYVPADDLTDPAPAT+FAHLDATTVLSR
Sbjct: 278 VGYQPTLATDMGELQERITSTKHGSI-TSVQAIYVPADDLTDPAPATSFAHLDATTVLSR 336
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
IAELGIYPAVDPLDSTS+++DP I+G EHYN+AR VQ+ILQ YKSLQDIIAILGMDELS
Sbjct: 337 QIAELGIYPAVDPLDSTSQVLDPMIVGEEHYNVARKVQQILQTYKSLQDIIAILGMDELS 396
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
EEDKLTV+RARKIQRFLSQPF VAEVFTG GK V L +TI GF + GKYD LPE AF
Sbjct: 397 EEDKLTVSRARKIQRFLSQPFHVAEVFTGAEGKFVNLADTIAGFKGLTEGKYDDLPEAAF 456
Query: 180 YMVGPIEEVVAKAETL 195
YMVG IEE + KA+TL
Sbjct: 457 YMVGTIEEALEKAKTL 472
>sp|P17614|ATPBM_NICPL ATP synthase subunit beta, mitochondrial OS=Nicotiana
plumbaginifolia GN=ATPB PE=1 SV=1
Length = 560
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/198 (69%), Positives = 158/198 (79%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 360 VGYQPTLATDLGGLQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 418
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
I+ELGIYPAVDPLDSTSR++ P+I+G +HYN ARGVQK+LQ+YK+LQDIIAILGMDELS
Sbjct: 419 QISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELS 478
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DK+TVARARKIQRFLSQPF VAEVFTG GK V L+E+I F +L GKYD L E +F
Sbjct: 479 EDDKMTVARARKIQRFLSQPFHVAEVFTGAPGKYVDLKESINSFQGVLDGKYDDLSEQSF 538
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVG I+EV+AKAE +AK
Sbjct: 539 YMVGGIDEVIAKAEKIAK 556
>sp|A5FZ54|ATPB_ACICJ ATP synthase subunit beta OS=Acidiphilium cryptum (strain JF-5)
GN=atpD PE=3 SV=1
Length = 476
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 137/196 (69%), Positives = 155/196 (79%), Gaps = 14/196 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPAT+F+HLDATT L+R
Sbjct: 278 VGYQPTLATDMGALQERITSTKKGSI-TSVQAIYVPADDLTDPAPATSFSHLDATTTLNR 336
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
AIAE GIYPAVDPLDSTSR +DP I+G EHYN+AR VQ+ILQ YKSLQDIIAILGMDELS
Sbjct: 337 AIAEKGIYPAVDPLDSTSRALDPRIVGEEHYNVAREVQRILQSYKSLQDIIAILGMDELS 396
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DKLTVARARKI+RFLSQPF VAEVFTG G VP+E+T++ F I AG+YDHLPE AF
Sbjct: 397 EDDKLTVARARKIERFLSQPFHVAEVFTGSPGIFVPVEDTVRSFKAICAGEYDHLPEAAF 456
Query: 180 YMVGPIEEVVAKAETL 195
YMVG IE+ V KAE+L
Sbjct: 457 YMVGTIEDAVKKAESL 472
>sp|P83483|ATPBM_ARATH ATP synthase subunit beta-1, mitochondrial OS=Arabidopsis thaliana
GN=At5g08670 PE=1 SV=1
Length = 556
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/198 (70%), Positives = 157/198 (79%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 356 VGYQPTLASDLGALQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 414
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
I+ELGIYPAVDPLDSTSR++ P+I+G EHYN ARGVQK+LQ+YK+LQDIIAILGMDELS
Sbjct: 415 QISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELS 474
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DKLTVARARKIQRFLSQPF VAE+FTG GK V L+E I F +L GKYD L E +F
Sbjct: 475 EDDKLTVARARKIQRFLSQPFHVAEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSF 534
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVG I+EVVAKAE +AK
Sbjct: 535 YMVGGIDEVVAKAEKIAK 552
>sp|Q5HX59|ATPB_CAMJR ATP synthase subunit beta OS=Campylobacter jejuni (strain RM1221)
GN=atpD PE=3 SV=1
Length = 465
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/195 (69%), Positives = 150/195 (76%), Gaps = 12/195 (6%)
Query: 13 IGYQPDCLKRFSIF------------LPAQAIYVPADDLTDPAPATTFAHLDATTVLSRA 60
+GYQP F QA+YVPADDLTDPAPAT FAHLDATTVL+RA
Sbjct: 269 VGYQPTLASEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRA 328
Query: 61 IAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELSE 120
IAE GIYPAVDPLDSTSR++DPNIIG EHY +ARGVQ +LQ YK LQDIIAILGMDELSE
Sbjct: 329 IAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSE 388
Query: 121 EDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAFY 180
EDKL V RARKI++FLSQPF VAEVFTG GK + LE+TI GF IL GKYDHLPE AFY
Sbjct: 389 EDKLVVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFY 448
Query: 181 MVGPIEEVVAKAETL 195
MVG I+E +AKA+ L
Sbjct: 449 MVGNIDEAIAKADKL 463
>sp|A1VXJ0|ATPB_CAMJJ ATP synthase subunit beta OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=atpD PE=3 SV=1
Length = 465
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/195 (69%), Positives = 150/195 (76%), Gaps = 12/195 (6%)
Query: 13 IGYQPDCLKRFSIF------------LPAQAIYVPADDLTDPAPATTFAHLDATTVLSRA 60
+GYQP F QA+YVPADDLTDPAPAT FAHLDATTVL+RA
Sbjct: 269 VGYQPTLASEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRA 328
Query: 61 IAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELSE 120
IAE GIYPAVDPLDSTSR++DPNIIG EHY +ARGVQ +LQ YK LQDIIAILGMDELSE
Sbjct: 329 IAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSE 388
Query: 121 EDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAFY 180
EDKL V RARKI++FLSQPF VAEVFTG GK + LE+TI GF IL GKYDHLPE AFY
Sbjct: 389 EDKLVVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFY 448
Query: 181 MVGPIEEVVAKAETL 195
MVG I+E +AKA+ L
Sbjct: 449 MVGNIDEAIAKADKL 463
>sp|Q0PC30|ATPB_CAMJE ATP synthase subunit beta OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=atpD PE=3 SV=1
Length = 465
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/195 (69%), Positives = 150/195 (76%), Gaps = 12/195 (6%)
Query: 13 IGYQPDCLKRFSIF------------LPAQAIYVPADDLTDPAPATTFAHLDATTVLSRA 60
+GYQP F QA+YVPADDLTDPAPAT FAHLDATTVL+RA
Sbjct: 269 VGYQPTLASEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRA 328
Query: 61 IAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELSE 120
IAE GIYPAVDPLDSTSR++DPNIIG EHY +ARGVQ +LQ YK LQDIIAILGMDELSE
Sbjct: 329 IAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSE 388
Query: 121 EDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAFY 180
EDKL V RARKI++FLSQPF VAEVFTG GK + LE+TI GF IL GKYDHLPE AFY
Sbjct: 389 EDKLVVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFY 448
Query: 181 MVGPIEEVVAKAETL 195
MVG I+E +AKA+ L
Sbjct: 449 MVGNIDEAIAKADKL 463
>sp|A8FJR2|ATPB_CAMJ8 ATP synthase subunit beta OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=atpD PE=3
SV=1
Length = 465
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/195 (69%), Positives = 150/195 (76%), Gaps = 12/195 (6%)
Query: 13 IGYQPDCLKRFSIF------------LPAQAIYVPADDLTDPAPATTFAHLDATTVLSRA 60
+GYQP F QA+YVPADDLTDPAPAT FAHLDATTVL+RA
Sbjct: 269 VGYQPTLASEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRA 328
Query: 61 IAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELSE 120
IAE GIYPAVDPLDSTSR++DPNIIG EHY +ARGVQ +LQ YK LQDIIAILGMDELSE
Sbjct: 329 IAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSE 388
Query: 121 EDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAFY 180
EDKL V RARKI++FLSQPF VAEVFTG GK + LE+TI GF IL GKYDHLPE AFY
Sbjct: 389 EDKLVVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFY 448
Query: 181 MVGPIEEVVAKAETL 195
MVG I+E +AKA+ L
Sbjct: 449 MVGNIDEAIAKADKL 463
>sp|P83484|ATPBN_ARATH ATP synthase subunit beta-2, mitochondrial OS=Arabidopsis thaliana
GN=At5g08690 PE=1 SV=1
Length = 556
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/198 (70%), Positives = 157/198 (79%), Gaps = 14/198 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ SI QAIYVPADDLTDPAPATTFAHLDATTVLSR
Sbjct: 356 VGYQPTLASDLGALQERITTTKKGSI-TSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 414
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
I+ELGIYPAVDPLDSTSR++ P+I+G EHYN ARGVQK+LQ+YK+LQDIIAILGMDELS
Sbjct: 415 QISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELS 474
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
E+DKLTVARARKIQRFLSQPF VAE+FTG GK V L+E I F +L GKYD L E +F
Sbjct: 475 EDDKLTVARARKIQRFLSQPFHVAEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSF 534
Query: 180 YMVGPIEEVVAKAETLAK 197
YMVG I+EVVAKAE +AK
Sbjct: 535 YMVGGIDEVVAKAEKIAK 552
>sp|C6E9F1|ATPB_GEOSM ATP synthase subunit beta OS=Geobacter sp. (strain M21) GN=atpD
PE=3 SV=1
Length = 470
Score = 273 bits (697), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 145/167 (86%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPAT FAHLDATTVLSR IAELGIYPAVDPLDSTSRI+DP +IG EH
Sbjct: 303 QAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGDEH 362
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
Y IAR VQ +LQ YK LQDIIAILGMDELSEEDKL VARARKIQ+FLSQPF VAE FTG
Sbjct: 363 YAIARQVQYVLQKYKDLQDIIAILGMDELSEEDKLVVARARKIQKFLSQPFHVAEAFTGS 422
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
GK V L++TIKGFSEI+AGK+D LPE AFYMVG IEE + KA+ LA
Sbjct: 423 PGKYVELKDTIKGFSEIIAGKHDDLPEQAFYMVGTIEEAIEKAQKLA 469
>sp|Q7P095|ATPB_CHRVO ATP synthase subunit beta OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=atpD PE=3 SV=1
Length = 465
Score = 273 bits (697), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/166 (80%), Positives = 142/166 (85%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QA+YVPADDLTDP+PATTFAHLDAT VLSR IA LGIYPAVDPLDSTSR +DP ++G EH
Sbjct: 299 QAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEH 358
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
Y +ARGVQ LQ YK L+DIIAILGMDELSEEDKL VARARKIQRFLSQPF VAEVFTG
Sbjct: 359 YTVARGVQSTLQRYKELRDIIAILGMDELSEEDKLVVARARKIQRFLSQPFHVAEVFTGS 418
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETL 195
GK VPL ETIKGF ILAG+YDHLPE AFYMVG IEE KA+TL
Sbjct: 419 PGKYVPLRETIKGFKAILAGEYDHLPEQAFYMVGAIEEAAEKAKTL 464
>sp|B5EFI7|ATPB_GEOBB ATP synthase subunit beta OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=atpD PE=3 SV=1
Length = 470
Score = 272 bits (696), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 145/167 (86%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPAT FAHLDATTVLSR IAELGIYPAVDPLDSTSRI+DP +IG EH
Sbjct: 303 QAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGDEH 362
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
Y IAR VQ +LQ YK LQDIIAILGMDELSEEDKL VARARKIQ+FLSQPF VAE FTG
Sbjct: 363 YAIARQVQYVLQKYKDLQDIIAILGMDELSEEDKLVVARARKIQKFLSQPFHVAEAFTGS 422
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
GK V L++TIKGFSEI+AGK+D LPE AFYMVG IEE + KA+ LA
Sbjct: 423 PGKYVELKDTIKGFSEIIAGKHDDLPEQAFYMVGTIEEAIEKAQKLA 469
>sp|A1BCJ2|ATPB_CHLPD ATP synthase subunit beta OS=Chlorobium phaeobacteroides (strain
DSM 266) GN=atpD PE=3 SV=1
Length = 462
Score = 272 bits (695), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/196 (70%), Positives = 158/196 (80%), Gaps = 14/196 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ S+ QAIYVPADDLTDPAPAT FAHLDATTVLSR
Sbjct: 268 VGYQPTLATEMGELQDRIVSTKKGSV-TSVQAIYVPADDLTDPAPATAFAHLDATTVLSR 326
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
+IAELGIYPAVDPLDSTSRI+DPNI+G +HY+ A+ V++ILQ YK LQDIIAILGMDELS
Sbjct: 327 SIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQILQRYKDLQDIIAILGMDELS 386
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
+EDKL V+RARK+QRFLSQPF VAE FTG AGK V L+ETIKGF EI+AGK+D+LPE AF
Sbjct: 387 DEDKLVVSRARKVQRFLSQPFFVAEAFTGLAGKYVKLDETIKGFKEIIAGKHDNLPESAF 446
Query: 180 YMVGPIEEVVAKAETL 195
Y+VG IEE V KA+TL
Sbjct: 447 YLVGTIEEAVQKAKTL 462
>sp|Q8KAC9|ATPB2_CHLTE ATP synthase subunit beta 2 OS=Chlorobium tepidum (strain ATCC
49652 / DSM 12025 / TLS) GN=atpD2 PE=3 SV=1
Length = 462
Score = 272 bits (695), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/196 (70%), Positives = 156/196 (79%), Gaps = 14/196 (7%)
Query: 13 IGYQPD-------------CLKRFSIFLPAQAIYVPADDLTDPAPATTFAHLDATTVLSR 59
+GYQP K+ S+ QAIYVPADDLTDPAPAT F HLDATTVLSR
Sbjct: 268 VGYQPTLSTEMGELQDRITSTKKGSV-TSVQAIYVPADDLTDPAPATAFTHLDATTVLSR 326
Query: 60 AIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELS 119
IAELGIYPAVDPLDSTSRI+DPNI+G +HYN A+ V++ILQ YK LQDIIAILGMDELS
Sbjct: 327 QIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAILGMDELS 386
Query: 120 EEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSEILAGKYDHLPEVAF 179
+EDKL VARARK+QRFLSQPF VAE FTG AGK V LE+TIKGF EI+ G++D+LPE AF
Sbjct: 387 DEDKLVVARARKVQRFLSQPFFVAEAFTGLAGKYVKLEDTIKGFKEIIDGRHDNLPEAAF 446
Query: 180 YMVGPIEEVVAKAETL 195
Y+VG IEE VAKA+TL
Sbjct: 447 YLVGTIEEAVAKAKTL 462
>sp|A8HS10|ATPB_AZOC5 ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1
Length = 478
Score = 272 bits (695), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/167 (79%), Positives = 145/167 (86%)
Query: 30 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 89
QAIYVPADDLTDPAPA +FAHLDATTVLSR+IAE GIYPAVDPLDSTSRI+ P +IG EH
Sbjct: 308 QAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRILSPLVIGEEH 367
Query: 90 YNIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGH 149
YN+AR VQ+ LQ YK+LQDIIAILGMDELSEEDKLTVARARKI+RFLSQPF VAEVFTG
Sbjct: 368 YNVARQVQQTLQRYKALQDIIAILGMDELSEEDKLTVARARKIERFLSQPFHVAEVFTGS 427
Query: 150 AGKLVPLEETIKGFSEILAGKYDHLPEVAFYMVGPIEEVVAKAETLA 196
GKLV L +TIKGF ++ GKYDHLPE AFYMVG IEE + K + LA
Sbjct: 428 PGKLVDLADTIKGFKGLVEGKYDHLPEQAFYMVGTIEEAIEKGKKLA 474
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,798,365
Number of Sequences: 539616
Number of extensions: 2783560
Number of successful extensions: 9683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 8232
Number of HSP's gapped (non-prelim): 1499
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)