BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6461
(703 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HCS7|SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2
Length = 855
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/714 (66%), Positives = 557/714 (78%), Gaps = 39/714 (5%)
Query: 24 ILRNPFSVKHWLRYIEHKKNAPKAIINTIYERSLKELPGSYKLWYNYLKLRRKQVKGKVI 83
I+RN FSVK WLRYIE K+ APK +N +YER+LK LP SYKLWY YLK RR QVK + +
Sbjct: 28 IMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCV 87
Query: 84 TDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHR 143
TDP+YEDVNN ER+ VFMHKMPR+WLDY +FLMDQ ++T TR FDRALRALPITQH R
Sbjct: 88 TDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSR 147
Query: 144 VWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKLAYIVNKE 203
+WPLYL F++SH +PETAVR +RR+LKL PE AE+YIEYL S +RLDEAA +LA +VN E
Sbjct: 148 IWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDE 207
Query: 204 SFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWNSLADYYI 263
FVSK GKSN+QLW+ELC++ISQNPDK++SLNVDAIIRGGL R+TDQLG LW SLADYYI
Sbjct: 208 RFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYI 267
Query: 264 RSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTPSEEDDIE 323
RSG FE+ARD+YEEAI+TV TVRDFTQVFD+YAQFEE + +ME +E EEDD++
Sbjct: 268 RSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGR-EEEDDVD 326
Query: 324 LELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRTYTEAVKTVD 383
LELRLAR E L+ RR LLLNSVLLRQNPH+V EWHKRV L G+P +II TYTEAV+TVD
Sbjct: 327 LELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVD 386
Query: 384 PKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRA 443
P A GK HTLW+ F KFYE N QL+DAR+I +KAT V + +V+DLA+VWC+ ELELR
Sbjct: 387 PFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRH 446
Query: 444 GQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGT------- 496
+ ALRL+ +ATA PAR Y D +E VQ RVYKS+K+WS+ ADLEES GT
Sbjct: 447 ENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAV 506
Query: 497 -------------------------------FKAYEKGIALFKWPYIFDIWNTYLTKFLS 525
FKAYE+GI+LFKWP + DIW+TYLTKF++
Sbjct: 507 YDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIA 566
Query: 526 RYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPE 585
RYGG KLERARDLFEQ L+ CPP+YAKTLYLLYA+LEEE GLARHAMAVYERAT AV P
Sbjct: 567 RYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPA 626
Query: 586 EMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARA 645
+ ++MFNIYIK+AAEIYG+ TR IY++AIE L +E R+MCL+FA+ME KLGEIDRARA
Sbjct: 627 QQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARA 686
Query: 646 IYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQAQYNTQVLF 699
IY+ CSQICDPR T FW WK FE+ HGNEDT++EMLRI+RSVQA YNTQV F
Sbjct: 687 IYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATYNTQVNF 740
>sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=2 SV=1
Length = 855
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/714 (66%), Positives = 557/714 (78%), Gaps = 39/714 (5%)
Query: 24 ILRNPFSVKHWLRYIEHKKNAPKAIINTIYERSLKELPGSYKLWYNYLKLRRKQVKGKVI 83
I+RN FSVK WLRYIE K+ APK +N +YER+LK LP SYKLWY YLK RR QVK + +
Sbjct: 28 IMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCV 87
Query: 84 TDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHR 143
TDP+YEDVNN ER+ VFMHKMPR+WLDY +FLMDQ ++T TR FDRALRALPITQH R
Sbjct: 88 TDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSR 147
Query: 144 VWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKLAYIVNKE 203
+WPLYL F++SH +PETAVR +RR+LKL PE AE+YIEYL S +RLDEAA +LA +VN E
Sbjct: 148 IWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDE 207
Query: 204 SFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWNSLADYYI 263
FVSK GKSN+QLW+ELC++ISQNPDK++SLNVDAIIRGGL R+TDQLG LW SLADYYI
Sbjct: 208 RFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYI 267
Query: 264 RSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTPSEEDDIE 323
RSG FE+ARD+YEEAI+TV TVRDFTQVFD+YAQFEE + +ME +E EEDD++
Sbjct: 268 RSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGR-EEEDDVD 326
Query: 324 LELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRTYTEAVKTVD 383
LELRLAR E L+ RR LLLNSVLLRQNPH+V EWHKRV L G+P +II TYTEAV+TVD
Sbjct: 327 LELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVD 386
Query: 384 PKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRA 443
P A GK HTLW+ F KFYE N QL+DAR+I +KAT V + +V+DLA+VWC+ ELELR
Sbjct: 387 PFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRH 446
Query: 444 GQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGT------- 496
+ AL+L+ +ATA PAR Y D +E VQ RVYKS+K+WS+ ADLEES GT
Sbjct: 447 ENYDEALKLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAV 506
Query: 497 -------------------------------FKAYEKGIALFKWPYIFDIWNTYLTKFLS 525
FKAYE+GI+LFKWP + DIW+TYLTKF+S
Sbjct: 507 YDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIS 566
Query: 526 RYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPE 585
RYGG KLERARDLFEQ L+ CPP+YAKTLYLLYA+LEEE GLARHAMAVY+RAT AV P
Sbjct: 567 RYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPA 626
Query: 586 EMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARA 645
+ ++MFNIYIK+AAEIYG+ TR IY++AIE L +E R+MCL+FA+ME KLGEIDRARA
Sbjct: 627 QQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARA 686
Query: 646 IYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQAQYNTQVLF 699
IY+ CSQICDPR T FW WK FE+ HGNEDT+REMLRI+RSVQA YNTQV F
Sbjct: 687 IYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATYNTQVNF 740
>sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2
SV=1
Length = 855
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/714 (66%), Positives = 557/714 (78%), Gaps = 39/714 (5%)
Query: 24 ILRNPFSVKHWLRYIEHKKNAPKAIINTIYERSLKELPGSYKLWYNYLKLRRKQVKGKVI 83
I+RN FSVK WLRYIE K+ APK +N +YER+LK LP SYKLWY YLK RR QVK + +
Sbjct: 28 IMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCV 87
Query: 84 TDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHR 143
TDP+YEDVNN ER+ VFMHKMPR+WLDY +FLMDQ ++T TR FDRALRALPITQH R
Sbjct: 88 TDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSR 147
Query: 144 VWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKLAYIVNKE 203
+WPLYL F++SH +PETAVR +RR+LKL PE AE+YIEYL S +RLDEAA +LA +VN E
Sbjct: 148 IWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDE 207
Query: 204 SFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWNSLADYYI 263
FVSK GKSN+QLW+ELC++ISQNPDK++SLNVDAIIRGGL R+TDQLG LW SLADYYI
Sbjct: 208 RFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYI 267
Query: 264 RSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTPSEEDDIE 323
RSG FE+ARD+YEEAI+TV TVRDFTQVFD+YAQFEE + +ME +E EEDD++
Sbjct: 268 RSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGR-EEEDDVD 326
Query: 324 LELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRTYTEAVKTVD 383
LELRLAR E L+ RR LLLNSVLLRQNPH+V EWHKRV L G+P +II TYTEAV+TVD
Sbjct: 327 LELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVD 386
Query: 384 PKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRA 443
P A GK HTLW+ F KFYE N QL+DAR+I +KAT V + +V+DLA+VWC+ ELELR
Sbjct: 387 PFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRH 446
Query: 444 GQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGT------- 496
+ AL+L+ +ATA PAR Y D +E VQ RVYKS+K+WS+ ADLEES GT
Sbjct: 447 ENYDEALKLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAV 506
Query: 497 -------------------------------FKAYEKGIALFKWPYIFDIWNTYLTKFLS 525
FKAYE+GI+LFKWP + DIW+TYLTKF+S
Sbjct: 507 YDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIS 566
Query: 526 RYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPE 585
RYGG KLERARDLFEQ L+ CPP+YAKTLYLLYA+LEEE GLARHAMAVY+RAT AV P
Sbjct: 567 RYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPA 626
Query: 586 EMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARA 645
+ ++MFNIYIK+AAEIYG+ TR IY++AIE L +E R+MCL+FA+ME KLGEIDRARA
Sbjct: 627 QQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARA 686
Query: 646 IYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQAQYNTQVLF 699
IY+ CSQICDPR T FW WK FE+ HGNEDT+REMLRI+RSVQA YNTQV F
Sbjct: 687 IYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATYNTQVNF 740
>sp|Q54Z08|SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum GN=xab2
PE=3 SV=1
Length = 850
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/723 (47%), Positives = 492/723 (68%), Gaps = 44/723 (6%)
Query: 16 EDLPYEEEILRNPFSVKHWLRYIEHKKNAPKAIINTIYERSLKELPGSYKLWYNYLKLRR 75
+DLPYEE++ +NP+SV WLRY+E K+ +P+ N IYER+++ELP SYK+W+ YL R
Sbjct: 30 DDLPYEEDVSKNPYSVNCWLRYLEFKQGSPQKQRNYIYERAIRELPRSYKIWHQYLLERT 89
Query: 76 KQVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRA 135
++GK I + S+E VN FERSLVF+ KMPRIW++Y FLM Q KIT TR FDRAL A
Sbjct: 90 LAIRGKCILENSFEAVNTLFERSLVFLDKMPRIWIEYCEFLMIQEKITLTRKTFDRALIA 149
Query: 136 LPITQHHRVWPLYLSFVKSHAVPE-TAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAV 194
LP+TQH+R+W Y F+ ++P T +RV++RYLK+ PE E+YIEYL I+ E
Sbjct: 150 LPVTQHYRIWNEYTKFILKRSIPSLTCIRVYKRYLKIQPEKVEEYIEYLIKIKEWQEVVN 209
Query: 195 KLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHL 254
+L +++ F S GKS H W +LCE++S P +I ++VD++IR G+ +++DQ+G L
Sbjct: 210 QLIKLLDNVKFKSIKGKSRHDHWLQLCEILSSYPKQITGVDVDSVIRSGIGKFSDQIGKL 269
Query: 255 WNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAEND 314
W L+DYYI+ FE+ARDI+EEA+ +V T RDF+ ++++Y QFE+ SL +EI E D
Sbjct: 270 WCYLSDYYIQLAQFEKARDIFEEALTSVGTARDFSFIWESYTQFED-SLIAAKQEILEED 328
Query: 315 TPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLD---I 371
PSE++ +E ++ + R E+L++R+ LLLNSV+L+QNP+NV EW KRV L+ + I
Sbjct: 329 -PSEDNLLEFDIIIERYENLIQRQPLLLNSVMLKQNPNNVQEWLKRVNLYSNPTPNVKMI 387
Query: 372 IRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLAT 431
I+T+T+++K++DP+LA GKL T++ F FYE N++L ARLIF+ + V + ++DL+T
Sbjct: 388 IQTFTDSIKSIDPQLAKGKLSTIYSTFAHFYEQNNKLSQARLIFENSLTVNFKTIDDLST 447
Query: 432 VWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLE 491
++C++AE+EL+ E A+ ++ R T +P + +E E VQ R++KSIK+W+ Y DLE
Sbjct: 448 LYCDYAEMELKHRNYEKAIEILKRGTVSPKKQNTIIEENEPVQKRLFKSIKIWTFYVDLE 507
Query: 492 ESFGT--------------------------------------FKAYEKGIALFKWPYIF 513
ESFGT FKAYE G+ LF +P++
Sbjct: 508 ESFGTFHNTKSIYEKMIQLKVVTPQIILNFAKYLEENKYFEDMFKAYEHGVQLFLFPHVQ 567
Query: 514 DIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMA 573
DIW TYLTKF+ RY G KLER RDLFEQ L PP+ + YL+YA EE++GLARH+MA
Sbjct: 568 DIWITYLTKFIQRYAGMKLERTRDLFEQVLSKVPPKESIIFYLMYANFEEQYGLARHSMA 627
Query: 574 VYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEM 633
VY+RA +V E+ F+M+ +YI +A+E +G+ +TR+I+ +AIE LP++ R MCLKFA+M
Sbjct: 628 VYDRAAKSVDKEDRFKMYLLYIHRASEFFGVNQTREIFSKAIEQLPDQYVRDMCLKFADM 687
Query: 634 ETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQAQY 693
E K GEIDRAR+IY H SQ DPR + +W W FE HGNEDT +EMLRI+RSVQA Y
Sbjct: 688 EKKYGEIDRARSIYIHGSQFSDPRTSMFYWNTWSDFEKLHGNEDTFKEMLRIRRSVQASY 747
Query: 694 NTQ 696
TQ
Sbjct: 748 ITQ 750
>sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3
SV=1
Length = 839
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/735 (49%), Positives = 477/735 (64%), Gaps = 53/735 (7%)
Query: 15 EEDLPYEEEILRNPFSVKHWLRYIEHKK-NAPKAIINTIYERSLKELPGSYKLWYNYLKL 73
++D YE+++ R P S+K WL YIE+K+ N + ER+ K+LP SYKLW YL+
Sbjct: 16 DQDTVYEQDLFRAPGSIKPWLAYIEYKQQNGTLYEQAFVMERACKQLPRSYKLWKMYLEF 75
Query: 74 RRKQVKGKVITD--PSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDR 131
R ++G+ T Y+ VN FER+L+ ++KMP+IW Y FL+ Q +TQTR FDR
Sbjct: 76 RINHLRGRNATKYRAEYQKVNALFERALILLNKMPKIWEMYLSFLLQQPLVTQTRRTFDR 135
Query: 132 ALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDE 191
ALRALPITQH+R+W LY +F +S A +TAV+++ RY+++ PE+AEDYIE L + + E
Sbjct: 136 ALRALPITQHNRIWKLYKAFARS-ASGQTAVKIWARYMQIHPENAEDYIELLVELGQYTE 194
Query: 192 AAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRS-----LNVDAIIRGGLRR 246
A + I++ F SK GKSN QLW E+ +++ +IR+ ++VDAI+R G+ R
Sbjct: 195 AVKRYMEILDDPRFQSKKGKSNFQLWTEMVDLLVSKAKQIRTGPQVGIDVDAILRSGIDR 254
Query: 247 YTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKR 306
+ DQ G LW LA Y+I G FE+ARD++EE I TV TVRDFT +FDAY +FEE +
Sbjct: 255 FADQRGKLWAGLATYWITKGNFEKARDVFEEGITTVMTVRDFTLIFDAYVEFEESIIGSL 314
Query: 307 MEEIA---ENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRL 363
ME A + E+ D +L+LR+ R E LM+RR L+N VLLRQNP+NV+EW KRV L
Sbjct: 315 MEAAAVRADKGNVDEDADFDLDLRMLRFEQLMDRRPFLVNDVLLRQNPNNVIEWEKRVAL 374
Query: 364 FDGKPLDIIRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPY 423
+ +I+ TYT A+ ++PK A GK LW+ + KFYE L+ AR+IFDKA VP+
Sbjct: 375 WGDNKEEIVNTYTAAIAAINPKKAHGKFSELWVNYAKFYESGGDLDTARVIFDKAVKVPF 434
Query: 424 TKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARP-VAYHDEAETVQARVYKSIK 482
V +LA WCEWAE+ELR+ + A+ +MA+AT P + V Y DE + Q RV+KS K
Sbjct: 435 KSVAELADTWCEWAEMELRSENFDKAVDIMAKATQAPKKSTVDYFDETLSPQQRVHKSWK 494
Query: 483 LWSLYADLEESFGT--------------------------------------FKAYEKGI 504
LWS Y DL ES T FK YE+G+
Sbjct: 495 LWSFYVDLVESVATLEETRKVYERIFELRIATPQTVVNYANLLEEHKYFEDSFKVYERGL 554
Query: 505 ALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEE 564
LF +P F++WN YLTK + R G +ER RDLFEQ L+ CPP++AK LYL+Y LEEE
Sbjct: 555 DLFSYPVAFELWNLYLTKAVDRKIG--IERLRDLFEQALDGCPPKFAKPLYLMYGNLEEE 612
Query: 565 HGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTR 624
GLARHAM +YERAT AV E+ FEMF YI K+A +G+ TR IYERAI +LP++ +
Sbjct: 613 RGLARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLTSTRPIYERAIAALPDQEAK 672
Query: 625 QMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLR 684
+MCLKFA+ME +LGEIDRARAIY H SQ CDPR AGFW W++FE+ HGNEDT +EMLR
Sbjct: 673 EMCLKFADMERRLGEIDRARAIYGHASQFCDPRTNAGFWQKWEAFEVQHGNEDTFKEMLR 732
Query: 685 IKRSVQAQYNTQVLF 699
IKRSVQAQYNT V F
Sbjct: 733 IKRSVQAQYNTDVNF 747
>sp|Q7SAK5|SYF1_NEUCR Pre-mRNA-splicing factor syf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=syf-1 PE=3 SV=1
Length = 829
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/738 (49%), Positives = 470/738 (63%), Gaps = 57/738 (7%)
Query: 14 NEEDLPYEEEILRNPFSVKHWLRYIEHKKNAPKAIINT---IYERSLKELPGSYKLWYNY 70
+EED PYE++I+RNP S K WL YIE+K K + I ER+ +LP SYKLW Y
Sbjct: 18 SEEDFPYEQDIVRNPGSTKPWLAYIEYKLQ--KGTVQEQAYIMERACVQLPRSYKLWKMY 75
Query: 71 LKLRRKQVK--GKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHV 128
L+ R K V I Y+ VN+ FER+L+ ++KMPRIW Y +FLM Q +T TR
Sbjct: 76 LRFRTKHVSKLNAAIFASEYQKVNSLFERALILLNKMPRIWEMYLKFLMQQPLVTHTRRT 135
Query: 129 FDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIER 188
FDRALRALPITQH+R+W LY F S A ETAV+++RRY+++ PEDAED+IE L ++
Sbjct: 136 FDRALRALPITQHNRIWALYRPFANS-AEGETAVKIWRRYMQVHPEDAEDFIELLVAVGL 194
Query: 189 LDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRS-----LNVDAIIRGG 243
EA K I+N F SK+ K +++LW+E+ +++ ++ + + ++V+ IIR G
Sbjct: 195 YTEAVHKYIEILNNPRFTSKNSKGHYELWSEMVDLLVEHATAVETGHETGIDVERIIRSG 254
Query: 244 LRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSL 303
+ R+ DQ G LW LA Y+IR G FERARD++EE I TV TVRDFT VFD+Y +FEE +
Sbjct: 255 IERFADQRGKLWCGLATYWIRRGSFERARDVFEEGITTVMTVRDFTLVFDSYTEFEESII 314
Query: 304 NKRMEEI---AENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKR 360
+ ME AE E D +L++R+ R E LM+RR LLN VLLRQNP+NV EW KR
Sbjct: 315 SALMEMASTRAEKGEVDEVADFDLDIRMMRFEHLMDRRPFLLNDVLLRQNPNNVTEWEKR 374
Query: 361 VRLFDGKPLDIIRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATL 420
V L+ ++++TY +A++ + PK AVG LH LW + KFYE L AR I +KA
Sbjct: 375 VALWGDNKEEVVKTYLDAIEAIQPKKAVGALHQLWTNYAKFYEAGGDLSSARRIMEKAVK 434
Query: 421 VPYTKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARP-VAYHDEAETVQARVYK 479
VPY V +LA +W EWAE+ELR + A+++MA+A P R V Y DE + Q RV+K
Sbjct: 435 VPYKSVAELADMWIEWAEMELRNECFDEAMKVMAKAVQAPKRSTVDYFDETLSPQQRVHK 494
Query: 480 SIKLWSLYADLEESFG--------------------------------------TFKAYE 501
S KLWS Y DL ES +FK YE
Sbjct: 495 SWKLWSFYVDLVESVSSLDETRKVYERIFELRIATPQTVVNYANLLEEHKYFEESFKIYE 554
Query: 502 KGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKL 561
+G+ LF +P F++WN YLTK + R +ER RDLFEQ +E CPP++AK +YL+Y L
Sbjct: 555 RGLDLFSYPVAFELWNLYLTKAVDR--KISIERLRDLFEQAVEDCPPKFAKVIYLMYGNL 612
Query: 562 EEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEE 621
EEE GLARHAM +YERAT AV E+ +MFN YI K+A +G+P TR IYERAI +LP+
Sbjct: 613 EEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPSTRPIYERAIAALPDA 672
Query: 622 PTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMRE 681
R MCLKFA+ME +LGEIDRARAIY H SQ CDPR GFW W FE+ HGNEDT +E
Sbjct: 673 EARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPGFWTKWDQFEVQHGNEDTYKE 732
Query: 682 MLRIKRSVQAQYNTQVLF 699
MLRIKRSVQAQYNT V F
Sbjct: 733 MLRIKRSVQAQYNTDVNF 750
>sp|Q52DF3|SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SYF1 PE=3 SV=2
Length = 832
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/735 (49%), Positives = 467/735 (63%), Gaps = 53/735 (7%)
Query: 15 EEDLPYEEEILRNPFSVKHWLRYIEHK-KNAPKAIINTIYERSLKELPGSYKLWYNYLKL 73
++D YE++I R+P S K WL YI +K ++ + ER+ +LP SYKLW YL
Sbjct: 22 DDDFVYEQDIQRSPGSTKPWLAYISYKIQHGTVEEQAFVLERACMQLPRSYKLWKMYLTF 81
Query: 74 RRKQVK--GKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDR 131
R K + I Y VN+ FER+L+ ++KMPRIW Y +FLM Q +T TR FDR
Sbjct: 82 RTKHIAKLNAAIFAAEYRKVNSLFERALILLNKMPRIWEMYLKFLMKQPLVTLTRRTFDR 141
Query: 132 ALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDE 191
ALRALPITQH+R+W LY F S A P TAV+++RRY+++ PEDAED+IE L + E
Sbjct: 142 ALRALPITQHNRIWALYRPFANSAAGP-TAVKIWRRYMQVHPEDAEDFIELLYQVGYYTE 200
Query: 192 AAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRS-----LNVDAIIRGGLRR 246
AA K ++N F SKHGK + +LW+E+ E++ ++ ++ + ++V+ IIR G+ R
Sbjct: 201 AAKKYIDVLNNPRFTSKHGKGHFELWSEMVELLVEHATEVEAGYETGIDVERIIRSGIER 260
Query: 247 YTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKR 306
+ DQ G LW LA Y+IR G FERARD++EE I TV TVRDFT VFD+YA+FEE +
Sbjct: 261 FADQRGKLWVGLATYWIRRGSFERARDVFEEGITTVMTVRDFTLVFDSYAEFEESVIGAM 320
Query: 307 ME---EIAENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRL 363
ME + AE E D +L++R+ R E LM+RR LLN VLLRQNP+NV EW KRV L
Sbjct: 321 MEVAGQRAEKGVVDEAADFDLDIRMMRFEHLMDRRPFLLNDVLLRQNPNNVNEWEKRVAL 380
Query: 364 FDGKPLDIIRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPY 423
+ +++ TYT A+ V PK A G H LW + KFYE L AR+I +KA VP+
Sbjct: 381 WGDNHNEVVNTYTNAIAAVQPKKASGPFHQLWANYAKFYERGGDLRSARIIMEKAVKVPF 440
Query: 424 TKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARP-VAYHDEAETVQARVYKSIK 482
V +LA +W EWAE+ELR E A+R+MA+A P R V Y DE T Q RV+KS K
Sbjct: 441 KSVVELADMWIEWAEMELRNDNFEEAVRIMAKAVQAPKRSTVDYFDETLTPQQRVHKSWK 500
Query: 483 LWSLYADLEESFGT--------------------------------------FKAYEKGI 504
LWS Y DL ES GT FK YE+G+
Sbjct: 501 LWSFYVDLVESVGTLEDTKKVYERIFELRIATPQTVVNYANLLEEHKYYEESFKIYERGL 560
Query: 505 ALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEE 564
LF +P F++WN YLTK + R +ER RDLFEQ +E CPP++AK +YL+Y LEEE
Sbjct: 561 DLFSYPVAFELWNMYLTKAVDR--KISIERLRDLFEQAVEGCPPKFAKIIYLMYGNLEEE 618
Query: 565 HGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTR 624
GLARHAM +YERAT AV E+ +MFN YI K+A +G+P TRQIYERAI +LP++ R
Sbjct: 619 RGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLPSTRQIYERAIAALPDDEAR 678
Query: 625 QMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLR 684
MCLKFA+ME +LGEIDRARAIY H SQ CDPR T FW W+ FE+ HGNEDT +EMLR
Sbjct: 679 DMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTTPAFWTKWEQFEVQHGNEDTFKEMLR 738
Query: 685 IKRSVQAQYNTQVLF 699
IKR+VQA+YNT V F
Sbjct: 739 IKRAVQAKYNTDVNF 753
>sp|Q5BH69|SYF1_EMENI Pre-mRNA-splicing factor syf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=syf1
PE=3 SV=1
Length = 851
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/752 (47%), Positives = 480/752 (63%), Gaps = 70/752 (9%)
Query: 15 EEDLPYEEEILRNPFSVKHWLRYIEHKKNAPK----------------AIIN--TIYERS 56
+ D YE+++LRNP ++K WL YIE+K+ +I+N + ER+
Sbjct: 16 DNDSVYEQDLLRNPGTIKPWLAYIEYKQQNGTLYEQAFVGRPLDALIISILNDFQVMERA 75
Query: 57 LKELPGSYKLWYNYLKLRRKQVKGK--VITDPSYEDVNNTFERSLVFMHKMPRIWLDYGR 114
K+LP SYKLW YL+ R K +K + + ++ VN FER+L+ ++KMPRIW Y
Sbjct: 76 CKQLPRSYKLWKMYLEFRTKHLKNRNAIKYRAEFQKVNTLFERALILLNKMPRIWEMYLT 135
Query: 115 FLMDQHKITQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPE 174
F++ Q +TQTR FDRALRALP+TQH+R+W LY +F +S A +TAV+++ RY+++ PE
Sbjct: 136 FMLQQPLVTQTRRTFDRALRALPVTQHNRIWKLYKTFARS-ASGQTAVKIWARYMQIHPE 194
Query: 175 DAEDYIEYLSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRS- 233
+AE+YI L + +A + I++ F S+ GKSN QLW E+ +++ KI +
Sbjct: 195 NAEEYINLLVEMGHYTDAIKRYMEILDNPRFQSREGKSNFQLWTEMVDLLVSKAKKIETG 254
Query: 234 ----LNVDAIIRGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFT 289
++VDAI+R G+ R+ DQ G LW LA Y+I G FE+ARD++EE I TV TVRDFT
Sbjct: 255 PQTGIDVDAILRSGIDRFADQRGKLWAGLATYWITKGNFEKARDVFEEGITTVMTVRDFT 314
Query: 290 QVFDAYAQFEELSLNKRMEEIA---ENDTPSEEDDIELELRLARLEDLMERRLLLLNSVL 346
+FD+Y +FEE + ME A +N EE D +L+LR+ R E LM+RR L+N VL
Sbjct: 315 LIFDSYVEFEESIIGSLMEAAAVRADNGKADEEADFDLDLRMLRFEQLMDRRPFLVNDVL 374
Query: 347 LRQNPHNVLEWHKRVRLFDGKPLDIIRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVND 406
LRQNP+NV+EW KRV L+ ++I+ TYT A+ ++PK AVGK LW+ + KFYE
Sbjct: 375 LRQNPNNVIEWEKRVALWGDNNVEIVNTYTAAIAAINPKKAVGKFSELWVNYAKFYERGG 434
Query: 407 QLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARP-VA 465
L+ AR+IF+KA VP+ V +LA WCEWAE+ELR+ + A+ +MA+AT P + V
Sbjct: 435 DLDTARIIFEKAVKVPFKSVNELAETWCEWAEMELRSENFDKAVEIMAKATQAPKKSTVD 494
Query: 466 YHDEAETVQARVYKSIKLWSLYADLEESFGT----------------------------- 496
Y DE + Q R++KS KLWS Y DL ES +
Sbjct: 495 YFDETLSPQQRIHKSWKLWSFYVDLVESVSSIEETKKVYERIFELRIATPQTVVNYANLL 554
Query: 497 ---------FKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACP 547
FK YE+G+ LF +P F++WN YLTK + R G +ER RDLFEQ L+ CP
Sbjct: 555 EEHKYFEESFKVYERGLDLFTYPVAFELWNLYLTKAVDRKIG--IERLRDLFEQALDGCP 612
Query: 548 PRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKT 607
P++A+ LYL+Y LEEE GLARHAM +YERAT AV E+ FEMF YI K+A +G+P T
Sbjct: 613 PKFARPLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLPST 672
Query: 608 RQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWK 667
R IYERAI +LP+ ++MCLKFAEME +LGEIDRARAIY H SQ CDPR A FW W+
Sbjct: 673 RPIYERAIAALPDHEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKWE 732
Query: 668 SFEITHGNEDTMREMLRIKRSVQAQYNTQVLF 699
+FE+ HGNEDT +EMLRIKRSVQAQYNT V F
Sbjct: 733 AFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNF 764
>sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf3 PE=1 SV=1
Length = 790
Score = 622 bits (1605), Expect = e-177, Method: Compositional matrix adjust.
Identities = 314/727 (43%), Positives = 462/727 (63%), Gaps = 47/727 (6%)
Query: 14 NEEDLPYEEEILRNPFSVKHWLRYIEHKKNAPKAIINTIYERSLKELPGSYKLWYNYLKL 73
N +D P+E E+LR+P+S+K WLRYI+ + + ++ER+ ELPGSYK+W +YL+L
Sbjct: 15 NVDDEPFELELLRDPYSLKSWLRYIKTHEGSTLEKRVLLFERACSELPGSYKIWKSYLEL 74
Query: 74 RRKQVK--GKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDR 131
R V+ ++ VN+ FERSL+ +HKMP IW Y +FLM Q +T+ R F+
Sbjct: 75 RVAHVEHLNPYFHAEAFASVNDCFERSLILLHKMPVIWKLYLQFLMKQPNVTKIRCTFNS 134
Query: 132 ALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDE 191
ALRALP+TQH +W ++ + + + V+RRY+++ P E+YIE L + +E
Sbjct: 135 ALRALPVTQHDDIWDMFTKYAEDIG-GLFCIHVYRRYIQVEPRAIENYIEILCKLGLWNE 193
Query: 192 AAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQL 251
AA + I+N+ F+S KSN+Q+W E E++ Q+PD ++++V+ + R G++R++DQ
Sbjct: 194 AARQYEDILNRPVFLSAKRKSNYQIWLEFSELVVQHPDHTQNIDVEKVFRAGIKRFSDQA 253
Query: 252 GHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIA 311
G LW LA YYIR G +E+AR + E + + TVR+FT +FDA+ +FEE L+ R+E +
Sbjct: 254 GKLWTYLAQYYIRIGDYEKARSTFYEGMNNIMTVRNFTIIFDAFVEFEEQWLSARVEASS 313
Query: 312 ENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDI 371
N D++ ++ +A LE ++++R L +N VLLRQN +NV EW +RV+ + +
Sbjct: 314 GNAN----DELSIDFHMAWLEKILDKRPLYINDVLLRQNINNVDEWLRRVKFLEDDSEKV 369
Query: 372 IRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLAT 431
++ YT+A+K V+PKLA G L L+ EF +FYE D LE +R+IF+KAT VPY V +LA
Sbjct: 370 VQVYTDAIKNVNPKLAHGSLGKLFSEFARFYENFDDLEQSRIIFEKATHVPYKTVNELAQ 429
Query: 432 VWCEWAELELRAGQEEAALRLMARATATPARP-VAYHDEAETVQARVYKSIKLWSLYADL 490
VW +WAE+ELR +AA +L+ A P + +++ DE+ + Q R++KS K+W Y DL
Sbjct: 430 VWIDWAEMELRHQNFDAARKLIGDAVHAPRKSHISFFDESLSPQVRLHKSSKIWMYYLDL 489
Query: 491 EESFGT--------------------------------------FKAYEKGIALFKWPYI 512
EES GT FK YE+G+ALF +P
Sbjct: 490 EESVGTIETTRKLYDRVFELKIATPQVVVNYANLLEENAYFEDSFKIYERGVALFSYPVA 549
Query: 513 FDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAM 572
F++WN YLTKF+ RY GT +ER RDLFEQ LE CPP ++K++YLLYA EE+ G A+ ++
Sbjct: 550 FELWNLYLTKFVKRYQGTHMERTRDLFEQALEGCPPEFSKSIYLLYADFEEKFGKAKRSI 609
Query: 573 AVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAE 632
++ E+A V + ++N+ + K A YG+ TR +YE+AIESL + + MCL+FAE
Sbjct: 610 SILEKAADKVKTADRLAIYNVLLVKVALNYGVLATRTVYEKAIESLSDSEVKDMCLRFAE 669
Query: 633 METKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGN-EDTMREMLRIKRSVQA 691
METKLGEIDRAR IY H SQ CDPRV +W AW+ FEI +GN E+T++EMLRIKRSVQ
Sbjct: 670 METKLGEIDRARLIYIHGSQYCDPRVETDYWKAWQEFEIRYGNPEETVKEMLRIKRSVQT 729
Query: 692 QYNTQVL 698
+++T L
Sbjct: 730 KFSTDSL 736
>sp|P0CO08|SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SYF1 PE=3 SV=1
Length = 1031
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/531 (48%), Positives = 335/531 (63%), Gaps = 58/531 (10%)
Query: 227 NPDKIRSLNVDAII-RGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTV 285
+P R L+V+ I+ R GL+ Y DQ G LW LA Y+I+ G FERA +E + V T+
Sbjct: 412 DPSNPRLLDVEGIVERDGLQVYKDQAGRLWTGLATYWIKRGEFERATATFERGLAAVVTI 471
Query: 286 RDFTQVFDAYAQFEELSLNKRMEEIAENDTPSEED------DIELELRLARLEDLMERRL 339
RDFTQ+FDAYA+F E ++ M+ +A+ D +ED + EL+ R+ E+LM+RR
Sbjct: 472 RDFTQIFDAYAEFSETMISTLMDALADEDNLEDEDFDAEETEQELDERMKSFEELMDRRP 531
Query: 340 LLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRTYTEAVKTVDPKLAVGKLHTLWIEFG 399
L+N VLLR+NP+ V+EW KR+ L ++ Y +A+ T++P+ A G L+ L++ F
Sbjct: 532 FLVNDVLLRRNPNEVVEWEKRIALHGDDDAKVVEAYVKALDTINPRKATGPLYPLYVNFA 591
Query: 400 KFYEVNDQ------------LEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEE 447
KFYE LE AR IF++AT VP+ V++LA VWCEWAE+ELR E
Sbjct: 592 KFYEEGGSKDDNGEPRNEPDLEQARKIFERATKVPFKAVDELAEVWCEWAEMELRNENYE 651
Query: 448 AALRLMARATATPARP-VAYHDEAETVQARVYKSIKLWSLYADLEESFGT---------- 496
A+RLM RAT P + Y+D+ Q+R++KS+KLWS Y+DLEES GT
Sbjct: 652 EAIRLMQRATTVPKNTKINYYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDK 711
Query: 497 ----------------------------FKAYEKGIALFKWPYIFDIWNTYLTKFLSRYG 528
FK YE+GI LF +P F+IWN YL+KF+ RYG
Sbjct: 712 IMELKIANAQVIVNYATFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYG 771
Query: 529 GTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMF 588
G KLERARDLFEQ LE CP ++ K LYL+YAKLEEEHGLA+ AM +Y+RA V + F
Sbjct: 772 GKKLERARDLFEQALENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKF 831
Query: 589 EMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYA 648
EM+ IYI KA +G+P TR IYERA+ESLP++ T +MC +FA ME KLGEIDRARAIYA
Sbjct: 832 EMYTIYIAKATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYA 891
Query: 649 HCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQAQYNTQVLF 699
H SQ CDPR+ FW W FEI G+EDT REMLRIKR+VQA +NT+ F
Sbjct: 892 HASQFCDPRIEPEFWQEWNDFEIETGSEDTFREMLRIKRAVQASFNTETSF 942
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 83/297 (27%)
Query: 17 DLPYEEEILRNPFSVKHWLRYIEHKKN--------------------APKAIIN------ 50
DLP EE++L NP +++ WL YI + K P A N
Sbjct: 34 DLPVEEDLLHNPENLRSWLSYIHNVKEKIAADEPAKGGVLSPEEEILGPLASKNARDGLQ 93
Query: 51 ---TIYERSLKELPGSYKLWYNYLKLRRKQVKGKVITDPS-------------------- 87
+IYER++ P SYKLW Y R+ V G++ D
Sbjct: 94 RLVSIYERAIAVFPTSYKLWKAYYLTRQSYVLGELTNDAKEARSQQAKRGAAYKTNVREL 153
Query: 88 ----------------------YEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQH----- 120
+ + T ER ++ + +P WL + L+
Sbjct: 154 LDGAEEAHEWTGGLDPVVGYAEWRSLVATGERMIMCLPNLPIPWLLHLGVLLHPKCPSVF 213
Query: 121 -KITQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDY 179
+ R FDRALR LP + H RVW LYL + + + RV+RRYLK+ P E +
Sbjct: 214 KNGSYARRAFDRALRTLPPSLHGRVWGLYLRWAEIVGG-DAGERVWRRYLKVDPSLTERH 272
Query: 180 IEYLSSIERLDEAA-----VKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKI 231
I YL E A + +A + + S GKS +QL+ + E++ + D+I
Sbjct: 273 ITYLLEAEEPRPLAAAKYLLSIARRAQQNLYSSLEGKSPYQLFVDFLELVEKYADQI 329
>sp|P0CO09|SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SYF1 PE=3 SV=1
Length = 1031
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/531 (48%), Positives = 335/531 (63%), Gaps = 58/531 (10%)
Query: 227 NPDKIRSLNVDAII-RGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTV 285
+P R L+V+ I+ R GL+ Y DQ G LW LA Y+I+ G FERA +E + V T+
Sbjct: 412 DPSNPRLLDVEGIVERDGLQVYKDQAGRLWTGLATYWIKRGEFERATATFERGLAAVVTI 471
Query: 286 RDFTQVFDAYAQFEELSLNKRMEEIAENDTPSEED------DIELELRLARLEDLMERRL 339
RDFTQ+FDAYA+F E ++ M+ +A+ D +ED + EL+ R+ E+LM+RR
Sbjct: 472 RDFTQIFDAYAEFSETMISTLMDALADEDNLEDEDFDAEETEQELDERMKSFEELMDRRP 531
Query: 340 LLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRTYTEAVKTVDPKLAVGKLHTLWIEFG 399
L+N VLLR+NP+ V+EW KR+ L ++ Y +A+ T++P+ A G L+ L++ F
Sbjct: 532 FLVNDVLLRRNPNEVVEWEKRIALHGDDDAKVVEAYVKALDTINPRKATGPLYPLYVNFA 591
Query: 400 KFYEVNDQ------------LEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEE 447
KFYE LE AR IF++AT VP+ V++LA VWCEWAE+ELR E
Sbjct: 592 KFYEEGGSKDDNGEPRNEPDLEQARKIFERATKVPFKAVDELAEVWCEWAEMELRNENYE 651
Query: 448 AALRLMARATATPARP-VAYHDEAETVQARVYKSIKLWSLYADLEESFGT---------- 496
A+RLM RAT P + Y+D+ Q+R++KS+KLWS Y+DLEES GT
Sbjct: 652 EAIRLMQRATTVPKNTKINYYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDK 711
Query: 497 ----------------------------FKAYEKGIALFKWPYIFDIWNTYLTKFLSRYG 528
FK YE+GI LF +P F+IWN YL+KF+ RYG
Sbjct: 712 IMELKIANAQVIVNYATFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYG 771
Query: 529 GTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMF 588
G KLERARDLFEQ LE CP ++ K LYL+YAKLEEEHGLA+ AM +Y+RA V + F
Sbjct: 772 GKKLERARDLFEQALENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKF 831
Query: 589 EMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYA 648
EM+ IYI KA +G+P TR IYERA+ESLP++ T +MC +FA ME KLGEIDRARAIYA
Sbjct: 832 EMYTIYIAKATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYA 891
Query: 649 HCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQAQYNTQVLF 699
H SQ CDPR+ FW W FEI G+EDT REMLRIKR+VQA +NT+ F
Sbjct: 892 HASQFCDPRIEPEFWQEWNDFEIETGSEDTFREMLRIKRAVQASFNTETSF 942
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 83/297 (27%)
Query: 17 DLPYEEEILRNPFSVKHWLRYIEHKKN--------------------APKAIIN------ 50
DLP EE++L NP +++ WL YI + K P A N
Sbjct: 34 DLPVEEDLLHNPENLRSWLSYIHNVKEKIAADEPAKGGVLSPEEEILGPLASKNARDGLQ 93
Query: 51 ---TIYERSLKELPGSYKLWYNYLKLRRKQVKGKVITDPS-------------------- 87
+IYER++ P SYKLW Y R+ V G++ D
Sbjct: 94 RLVSIYERAIAVFPTSYKLWKAYYLTRQSYVLGELTNDAKEARSQQAKRGAAYKTNVREL 153
Query: 88 ----------------------YEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQH----- 120
+ + T ER ++ + +P WL + L+
Sbjct: 154 LDGAEEAHEWTGGLDPVVGYAEWRSLVATGERMIMCLPNLPIPWLLHLGVLLHPKCPSVF 213
Query: 121 -KITQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDY 179
+ R FDRALR LP + H RVW LYL + + + RV+RRYLK+ P E +
Sbjct: 214 KNGSYARRAFDRALRTLPPSLHGRVWGLYLRWAEIVGG-DAGERVWRRYLKVDPSLTERH 272
Query: 180 IEYLSSIERLDEAA-----VKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKI 231
I YL E A + +A + + S GKS +QL+ + E++ + D+I
Sbjct: 273 ITYLLEAEEPRPLAAAKYLLSIARRAQQNLYSSLEGKSPYQLFVDFLELVEKYADQI 329
>sp|Q6CAR6|SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SYF1 PE=3 SV=1
Length = 736
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 292/720 (40%), Positives = 416/720 (57%), Gaps = 73/720 (10%)
Query: 20 YEEEILRNPFSVKHWLRYIEHKKNAPKAIIN--TIYERSLKELPGSYKLWYNYLKLRRKQ 77
+E +I +P V+ W+RYI KN ++ER++ LP SYKLW YL R
Sbjct: 4 HELDIASSPGDVRPWIRYISSVKNDKTTARQKCILFERAVTALPRSYKLWKEYLDFRSGL 63
Query: 78 VKG--KVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRA 135
G + Y+ VN +E+SLV +HKMP IWL Y +FLM Q K+T+TR V + ALR+
Sbjct: 64 CTGLNPIKHADEYDRVNALYEKSLVLLHKMPVIWLQYLQFLMLQPKVTKTRSVINEALRS 123
Query: 136 LPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVK 195
LP+ QH RV L L F P T+V++++RY+ +P+ E + L + EAAV
Sbjct: 124 LPVQQHPRVLKLALQFGTKVGGP-TSVQIWKRYVLAYPDQKETMAQSLIKMGYHGEAAVV 182
Query: 196 LAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLW 255
L ++N N+ LW EL ++I ++ V+ II G++R+ DQ G L
Sbjct: 183 LIELLNASG-------DNYALWTELVDLIGESDKLTLEPPVEQIISSGIKRFPDQRGPLT 235
Query: 256 NSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDT 315
LA++ +R+G E ARD++E+ I T TVRDFT VFDAYA+FEE + + + EN++
Sbjct: 236 VQLANFLVRNGDLESARDVFEDGITTANTVRDFTVVFDAYAEFEE----RIVTHLIENES 291
Query: 316 PSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRTY 375
P +LR+A+L+ L+ERR L++ V LR+ P++VLEW KR+ L++ P + + Y
Sbjct: 292 PMA------DLRIAKLDHLLERRPFLISDVRLRREPYSVLEWQKRIALYE-DPAETVAAY 344
Query: 376 TEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCE 435
TEAV+++ P A GKL LWI + KFY + E A I+ KATLVPY V +LA V+
Sbjct: 345 TEAVQSIPPAKADGKLSQLWISWAKFYA--EDRETACEIYHKATLVPYKSVSELADVYLA 402
Query: 436 WAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFG 495
W++ E E A++++ +A +P V+YH+ T Q R++KS++LWS YADL ES+G
Sbjct: 403 WSQYESENDHWENAVKIIKQALESPNTHVSYHNSDLTAQDRIHKSVRLWSYYADLVESYG 462
Query: 496 T--------------------------------------FKAYEKGIALFKWPYIFDIWN 517
T FK YEKGI+LF+ F+IWN
Sbjct: 463 TFEETKQVYEKIMALDLLTPLFVVNYATLLEENDHFEEMFKVYEKGISLFE-ESAFEIWN 521
Query: 518 TYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYER 577
YL K R G LER RDLFE + P + K LY+LY KLEE+ GL R+AM VY
Sbjct: 522 LYLVKASPRLG---LERLRDLFEDAISKFPTQ--KALYILYGKLEEDRGLVRNAMRVYSA 576
Query: 578 ATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKL 637
V + E F YI + E +G+ TR +Y++A+ESLP + ++ L +A+ME KL
Sbjct: 577 MCDHV---KTSETFKYYIGRTVENFGLAATRPVYDKALESLPNKDASELALDYAQMEEKL 633
Query: 638 GEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQAQYNTQV 697
GEIDRARAIY + SQ DP++ ++ AW FE+ HG EDT ++MLRIKRS+QAQ+NT +
Sbjct: 634 GEIDRARAIYGYGSQFSDPQIIK-YYDAWHKFEVAHGTEDTFKDMLRIKRSIQAQFNTDI 692
>sp|Q4P7S1|SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SYF1 PE=3 SV=1
Length = 1081
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 269/615 (43%), Positives = 358/615 (58%), Gaps = 93/615 (15%)
Query: 169 LKLFPEDAEDYIEY---LSSIERLDEAAVKLAYIVNKESF---VSKHGKSNHQLWNELCE 222
+ L PE+ + Y+++ L+S + A +I K + ++K S H E
Sbjct: 384 IGLDPEEEKKYLQHSVALTSDNGMTNARRAPRHIQGKGTAAREIAKASSSKHP------E 437
Query: 223 MISQNPDKIRSLNVDAII-RGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQT 281
+ +P + LNV AII + GL +++DQ G LW LA Y+I+ G F+ ARD +E IQT
Sbjct: 438 TDALDPTR---LNVTAIIQKDGLDKFSDQSGRLWTGLATYWIKRGEFDVARDTFEAGIQT 494
Query: 282 VTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTPS-----------EEDDIELELRLAR 330
V TVRDFTQ+FDAYA+ E + M+E+ E E+ + EL+ R+
Sbjct: 495 VKTVRDFTQIFDAYAETSENVIAFMMDELTEEGGDEEADAEDQEETREDKEAELDRRMQE 554
Query: 331 LEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRTYTEAVKTVDPKLAVGK 390
E+L+ERR LL+N VLLR+NP +V EW KRV L+ II TY EA++ ++P+ A
Sbjct: 555 FEELIERRPLLVNDVLLRRNPDDVQEWEKRVMLYGDNDEKIIETYREAIQKINPRKATPN 614
Query: 391 LHTLWIEFGKFYEVNDQ--------------------------LEDARLIFDKATLVPYT 424
H L++ F +FYE LE AR IF+KA +P+
Sbjct: 615 FHQLFLNFAQFYEYGGSAGLAKRMAEGVEGQEEEEQAEQVEGDLESARKIFEKAITIPFR 674
Query: 425 KVEDLATVWCEWAELELRAGQEEAALRLMARATATP--ARPVAYHDEAETVQARVYKSIK 482
+V+DLA +WCEWAE+ELR + A+R MAR+ A P + + YHD+ Q R++KS+K
Sbjct: 675 RVDDLAEIWCEWAEMELRHSNYDEAIRTMARSVAPPRNTKGIQYHDDTLPPQTRLFKSLK 734
Query: 483 LWSLYADLEESFG--------------------------------------TFKAYEKGI 504
LWS Y DLEES G +FK +E+G+
Sbjct: 735 LWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINYAAFLEDNKYFEESFKVFERGV 794
Query: 505 ALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEE 564
LF +P F+IWN YL+KF+ RYGG KLERARDLFEQ L+ CP R+ K L L+Y +LEEE
Sbjct: 795 ELFSYPVAFEIWNVYLSKFVKRYGGAKLERARDLFEQALDKCPARFCKPLMLMYGQLEEE 854
Query: 565 HGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTR 624
HGL + AM +YERAT AV ++ F+M+ YI KAA +G+ TR IYERAIESLP+ T
Sbjct: 855 HGLVKRAMKIYERATRAVSTDDRFDMYVFYIAKAAATFGLAATRPIYERAIESLPDRQTA 914
Query: 625 QMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLR 684
+MCL+FA +E KLGEIDRAR IYAH SQ CDPR FW W FEI G+EDT REMLR
Sbjct: 915 EMCLRFAALERKLGEIDRARVIYAHASQFCDPRTQTDFWKEWNQFEIETGSEDTFREMLR 974
Query: 685 IKRSVQAQYNTQVLF 699
IKRSVQAQ+NT V +
Sbjct: 975 IKRSVQAQFNTDVSY 989
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 127/326 (38%), Gaps = 112/326 (34%)
Query: 17 DLPYEEEILRNPFSVKHWLRYIEH-------KKNAPKAIINT------------------ 51
D+ E+E+LRNP + + W YI+H K+ P + T
Sbjct: 60 DILLEQELLRNPDNFRSWSSYIDHIINTNVVKRPPPDVSLTTYQAALLGPLASSTQRTAL 119
Query: 52 -----IYERSLKELPGSYKLWYNYLKLRRKQVKGK------------------------- 81
IYER+L + P Y LW +YL+ R + V G
Sbjct: 120 RRLTSIYERALAQFPTRYSLWRDYLQNRSRFVLGDPKGGSDAKRKRDLQAAREKLDFGPT 179
Query: 82 VITDPSYEDVNNTF--------------------ERSLVFMHKMPRIWLDY-GRFLMDQH 120
+I ED + + ER+L+++ MPR+WL Y F+ Q
Sbjct: 180 LIDSVEDEDFGSAYRGGLDGTVGWQEWKSLAALYERALMWLPTMPRLWLSYLSMFIHPQC 239
Query: 121 ----KITQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDA 176
T R FDRALR LP + H RVW +YL + + ET +RV+RRYL++ P
Sbjct: 240 PPILSFTHARRTFDRALRTLPGSLHLRVWKVYLKWAERRG-GETCLRVWRRYLRVDPSLT 298
Query: 177 EDYIEYL----------------------------SSIERLDEAA---VKLAYIVNKESF 205
E Y+ L S + EA+ + LA ++
Sbjct: 299 ERYVSILLAQREDQDEPEGEEEEAEDDAQSDRSRKQSGSKALEASKLLLGLARSAMDGTY 358
Query: 206 VSKHGKSNHQLWNELCEMISQNPDKI 231
VS GKS QL+ E E+ + P++I
Sbjct: 359 VSPEGKSPFQLFVEWLELTEKYPEEI 384
>sp|Q6BQ23|SYF1_DEBHA Pre-mRNA-splicing factor SYF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SYF1 PE=3 SV=2
Length = 850
Score = 355 bits (911), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 234/805 (29%), Positives = 399/805 (49%), Gaps = 129/805 (16%)
Query: 15 EEDLPYEEEILRNPFSVKHWLRYIEHKKNAPKAIINT---IYERSLKELPGSYKLWYNYL 71
E+D+PYE+E+ +NP ++ +WLRY K + I ER++K+LP SYKLW Y+
Sbjct: 14 EDDIPYEQEVAKNPNNLSNWLRYYRFKSSTSSCTFQNRVFILERAVKQLPRSYKLWMIYI 73
Query: 72 KLRRKQVKGKVITDPSYE--DVNNTFERSLVFMHKMPRIWLDYGRFLMDQ--HKITQTRH 127
+ ++V+ V E VN FERSL +++ P +W+ Y FL++ ++IT R
Sbjct: 74 DVVLQEVQTSVSYKSKSEILSVNMVFERSLQLLNRAPILWIKYLEFLVETQPYEITLLRR 133
Query: 128 VFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLF-PED----------- 175
F+ L LPI+QHH +WPLY+ F T V+V+ +YL+ PE
Sbjct: 134 KFNECLYNLPISQHHLIWPLYIRFADDVG-GMTGVKVYLKYLQYANPESLQGLNNEQEGE 192
Query: 176 ----AEDYIEYLSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKI 231
+D I L + EA+ +I+ KS QLW E +++ + K
Sbjct: 193 LGITIDDIISKLVEFGDVKEASKLFQHILQHTDKFIGLSKSPLQLWIEYIDLLVNSVSKN 252
Query: 232 RSLNVD---------AIIRGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTV 282
+ V+ +I+ GL+++ DQ+G + L Y+I+ +AR ++E ++T
Sbjct: 253 KRSTVNYNEFDYFFEKLIKDGLQKFPDQIGKFYLKLTFYFIKRKNLFKARYYFDEGLKTC 312
Query: 283 TTVRDFTQVFDAYAQFEE---LSLNKRMEEIAENDTPSEEDDIELELRLARLEDLMERRL 339
+V+DFT +FD+Y +FEE ++++++E++ E+ + E L+LR+ E L+ R
Sbjct: 313 VSVKDFTMIFDSYTEFEENILTNMSEKLEKLGEDSDLNNE----LDLRMNVFEKLINDRP 368
Query: 340 LLLNSVLLRQNPHNVLEWHKRVRLF--DGKPLDIIRTYTEAVKTVDP----KLAVGKLHT 393
LLN ++LRQ+ +N+ EW K++ L+ D ++ TY A++T++P LA K +T
Sbjct: 369 YLLNDMMLRQDVNNLDEWFKKIVLYKKDSDINMMLDTYAAALRTINPLKAHSLANKKENT 428
Query: 394 L---WIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAAL 450
L WI + Y + ++ A LIF K+ + +DLAT++ EW EL ++ ++ A+
Sbjct: 429 LPNLWINYANVYASQNDVKTANLIFSKSVKSQFQSPDDLATLYIEWCELFVKHNDDKKAI 488
Query: 451 RLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESF---------------- 494
++ + Y+D + + RV KSIKLWS Y DL ES
Sbjct: 489 EIVEDICTSERGKFDYNDSSIDIHIRVQKSIKLWSFYLDLLESMIENNNQIDEIEKVINA 548
Query: 495 -----------------------------GTFKAYEKGIALFKWPYI-FDIWNTYLTKFL 524
+F AYE G+ +FK I F+IWN YL+K +
Sbjct: 549 YNITIDLKIATPLTIINFANFLEEWNFYERSFSAYEMGLKIFKDSKIKFEIWNIYLSKII 608
Query: 525 SRYGGTKLERARDLFEQCL--------EACPPRYAKTLYLLYAKLEEEHGLARHAMAV-- 574
+ER RDLFEQCL CP K +YLLY++ E+ G ++ +
Sbjct: 609 KH--ELNIERIRDLFEQCLNESSIEGYNGCPANLCKPVYLLYSQYEQSKGWFTKSVKILQ 666
Query: 575 --------------YERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIE---- 616
Y +A + + F+++ + I K ++ +TR+IYE++++
Sbjct: 667 QGLSKLDDGYNQEFYTKAEKDTILRDKFDIYQVLISKILKLNDHNETRKIYEQSLKDNQL 726
Query: 617 SLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPR--VTAGFWAAWKSFEITHG 674
+LP Q+ ++F ET+L E +R R+++ + Q+ +P+ + W W++FE+ HG
Sbjct: 727 TLPN--LIQLTMEFINFETELMEFNRVRSLFKYVCQLSNPQSPLIEPIWHNWETFELNHG 784
Query: 675 NEDTMREMLRIKRSVQAQYNTQVLF 699
NE T ++MLR KR + ++ ++
Sbjct: 785 NEATFKDMLRFKRKIVTEFEKDIIL 809
>sp|Q75EF0|SYF1_ASHGO Pre-mRNA-splicing factor SYF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SYF1 PE=3
SV=2
Length = 803
Score = 256 bits (653), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 201/759 (26%), Positives = 344/759 (45%), Gaps = 92/759 (12%)
Query: 16 EDLPYEEEILRNPFSVKHWLRYIEHKKNAPKAIINTIYERSLKELPGSYKLWYNYLKLRR 75
EDL +E +L+ P SV +W RYI K++ P ++ + +YER L+ LP +++W YL+ R
Sbjct: 8 EDLVHEYSVLQEPDSVVNWSRYIAAKRDDPCSV-SWVYERCLQALPAQWEVWREYLQFRM 66
Query: 76 KQVKG--KVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRAL 133
+ + G V +E VN F R + + W + Q + R V D AL
Sbjct: 67 RLLDGVCAVQHAAEFEKVNRLFWRCVEHNAAVVEAWRLFLGHAQRQGALALVRQVVDAAL 126
Query: 134 RALPITQHHRVWPLYLSFVKS---------------HAVPETAV---------------- 162
R + + +H VW +++++ H + A+
Sbjct: 127 RGVGLAKHRTVWEDVVAYIEELLPAEETDLGEEQDLHELVRGALFGGAGAEDAGADIWSS 186
Query: 163 RVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCE 222
+ RRY+++ EDAE + L D A V Y + K ++
Sbjct: 187 AMLRRYIQV-AEDAEAVLALLQRTH--DYATVVAVYEKHVLPVTRAKHKGRQSYESQFRY 243
Query: 223 MISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTV 282
+++ + + DA+ R + + ++ L LA +Y++ G + R D+ ++++
Sbjct: 244 LVALDHTGATAKLEDAVARCA-QLFPERAPSLTIFLAKHYVKQGNYNRCTDVLTDSLKHT 302
Query: 283 TTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTPSEEDDIELELRLARLEDLMERRLLLL 342
+F ++D FEE + +E + E+ E +LE +L+ L+ LLL
Sbjct: 303 AKSSEFASLYDFLVVFEESLIEVVLEHLQEHPENEERWGADLERHTDQLDGLLADHALLL 362
Query: 343 NSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRTYTEAVKTVDPKLAV--GKLHTLWIEFGK 400
N + LRQ P NV W RV LFD K Y +A+ +++ K G+L TLW ++ +
Sbjct: 363 NDLKLRQEPDNVKHWLDRVELFD-KAASKASVYADAIASINYKSQTVPGQLGTLWWQYAQ 421
Query: 401 FYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMARATATP 460
Y + Q E A+ I DKA VPY ++D +W +WAE EL+ +AA+++++ A P
Sbjct: 422 LYIDDGQYETAKTILDKALNVPYNFLQDPELIWTKWAEEELKRAGLDAAMQVLSHALQIP 481
Query: 461 ARPVAYHDEAET-----VQARVYKSIKLWSLYADLEESFG-------------------- 495
D+ E+ Q ++ S+KLWS Y DL E+
Sbjct: 482 DDHELLRDKFESHEKMPAQTVIFSSLKLWSFYIDLLEASSESDEHLERTKAAYEATIQLK 541
Query: 496 ----------------------TFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLE 533
+F YE+ + +F F+IW+ Y+ + L +YG K E
Sbjct: 542 IATPLLFVNYAHYLQDKGNHVESFSIYERAVDIFPAETAFEIWDIYIGEAL-KYGLPK-E 599
Query: 534 RARDLFEQCLE-ACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERAT-GAVLPEEMFEMF 591
+ RDLFE L+ A K +LLYAK E ++G+ A + RA A + ++
Sbjct: 600 QIRDLFESSLKMANEGVECKPFFLLYAKFERDNGMIETAANILHRACRAAQTMDAKRSLW 659
Query: 592 NIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCS 651
+ + + G R +YE I++LP L++A++E L ++ RARA+ + +
Sbjct: 660 TLCLNWCRQELGGSYARALYEECIQALPNHVAVVYVLEYAKVEEGLKQVKRARALLQYGA 719
Query: 652 QICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQ 690
++ P A W W+ FE+ HGN+DT ++ML++KR V+
Sbjct: 720 RLLHPANNADLWEYWELFELRHGNKDTYKDMLQLKRKVE 758
>sp|Q04048|SYF1_YEAST Pre-mRNA-splicing factor SYF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SYF1 PE=1 SV=1
Length = 859
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 194/806 (24%), Positives = 342/806 (42%), Gaps = 142/806 (17%)
Query: 14 NEEDLPYEEEILRNPFSVKHWLRYIEHKKNAPKA--IINTIYERSLKELPGSYKLWYNYL 71
N+ED+ +E EI + P ++ W RYIE+ K + I +YER + +W +Y+
Sbjct: 20 NDEDVAFEYEIQKTPQNILTWKRYIEYWKEEGRTDKQIRWLYERFCSQFVTDTSIWEDYI 79
Query: 72 KLRRKQVKGKVITDPSYEDVNNTFERSL-VFMHKMPRIWLDYGRFLMDQHKITQTRHVFD 130
R + K V T + F+R L + RI L Y ++Q+ + RH
Sbjct: 80 --RWESTKEVVETSRIFW----LFQRCLKSCVRDCDRICLSYLELAIEQYDLAMIRHALA 133
Query: 131 RALRALPITQHHRVWPLYLSFVK------------------------------------- 153
+L + H +VW + FV+
Sbjct: 134 SSLMKMEREMHRKVWDPVIKFVEEKVLPLTQLDSTQEDEEESTDEAELINVLLVKGFTKG 193
Query: 154 ---SHAVPETAVR-------VFRRYLKLFPEDAEDYIEYLSSIERL-DEAAVKLAYIVNK 202
S + E R + RYLK+ P+ + E L+++ D +K Y
Sbjct: 194 GFISEEISENGSRGDIWSSHILERYLKVAPQQKRN--ESLATLALTRDNITIKSVY---- 247
Query: 203 ESFVSKHGKSNHQL-WNELCEMISQN-PDKIRSLNVDAIIRGGLRR----YTDQLGHLWN 256
E ++ + S L +EL ++ N + L +D +R+ Y D+ L
Sbjct: 248 EKYLPQDENSGKYLPSSELPFELNFNYLASLEKLGLDNQYEEFMRQMNGIYPDKWLFLIL 307
Query: 257 SLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTP 316
SLA YYI G + D+ ++++Q DF ++++ Y FE+ + ++ END+
Sbjct: 308 SLAKYYISRGRLDSCGDLLKKSLQQTLRYSDFDRIYNFYLLFEQECSQFILGKLKENDSK 367
Query: 317 --SEEDDIE-LELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIR 373
+++D E L+ +A E L+ + LN V LRQ+ + V W KRV L +
Sbjct: 368 FFNQKDWTEKLQAHMATFESLINLYDIYLNDVALRQDSNLVETWMKRVSL-QKSAAEKCN 426
Query: 374 TYTEAVKTVDPKLA--VGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLAT 431
Y+EA+ +DP+ G LW +G Y ++ + AR ++ ++ VPY +EDL
Sbjct: 427 VYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNAISTARELWTQSLKVPYPYIEDLEE 486
Query: 432 VWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAET------VQARVYKSIKLWS 485
++ WA+ EL E A ++ A P P ++ + Q ++ S+++WS
Sbjct: 487 IYLNWADRELDKEGVERAFSILEDALHVPTNPEILLEKYKNGHRKIPAQTVLFNSLRIWS 546
Query: 486 LYAD------------------------------------LEESFG-----------TFK 498
Y D + E+F +F+
Sbjct: 547 KYIDYLEAYCPKDANSSDKIFNKTKMAYNTVIDLRLITPAMAENFALFLQNHYEVMESFQ 606
Query: 499 AYEKGIALFKWPYIFDIWNTYLTKFLS-RYGGTKLERARDLFEQCLEA-CPPRY-AKTLY 555
YEK I LF +++W YL S + E R LFE+ L+ C KT++
Sbjct: 607 VYEKTIPLFPPEIQYELWIEYLEVATSHQLSSLSPEHIRFLFEKALKNLCSNGIDCKTIF 666
Query: 556 LLYAKLEEE-HGLARHAMAVYERATGAVLP--------EEMFEMFNIYIKKAAEIYGIPK 606
+ Y+ EE GL ++ + R GAV+ E +++ + I KA G
Sbjct: 667 IAYSVFEERISGLISKSIEILRR--GAVIGTVSVSTHLESRLQLWRMCISKAESTLGPSV 724
Query: 607 TRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAW 666
TR++Y+ I+ LP + +KF++ E+ +GE RAR I A+ +++ P W ++
Sbjct: 725 TRELYQECIQILPNSKAVEFVIKFSDFESSIGETIRAREILAYGAKLLPPSRNTELWDSF 784
Query: 667 KSFEITHGNEDTMREMLRIKRSVQAQ 692
+ FE+ HG+++T ++ML++K+ +++
Sbjct: 785 EIFELKHGDKETYKDMLKMKKVLESN 810
>sp|Q6CYA2|SYF1_KLULA Pre-mRNA-splicing factor SYF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=SYF1 PE=3 SV=1
Length = 798
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 179/756 (23%), Positives = 328/756 (43%), Gaps = 95/756 (12%)
Query: 15 EEDLPYEEEILRNPFSVKHWLRYIEHKKNAPKAI-INTIYERSLKELPGSYKLWYNYLKL 73
EED+P+E ++R + W RY+ K++A + ++ +YER LKE+ + LW +LK
Sbjct: 9 EEDIPFEYGVVRERDNAVSWSRYLATKRSAGDELNLDWLYERCLKEIKDDWHLWKEFLKW 68
Query: 74 RRKQVKGKVI--TDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDR 131
R + + I Y ++ FE+ L K+ W+ Y +++ + + R + +
Sbjct: 69 RIELLNDCDIFRHKDEYNKISLLFEQCLTSCGKVGDAWIMYMEWVIQFKDLKRIRELLGK 128
Query: 132 ALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYL-------- 183
ALR++ H +W + + F+ + E + R L L ED I Y
Sbjct: 129 ALRSMSWEYHEAIWRVVIDFI----INELLIDNKRYELSL-----EDSIYYFVHGEHSTN 179
Query: 184 -------SSIER-----LDEAAVKLAYIVNKESFVS------KHGKSNHQ-----LWNEL 220
SSI + D+ L YI + + KH N + L+
Sbjct: 180 FDTDLWSSSILQRYSLICDDIEPLLIYIFKTHDWSTIVRVFEKHLSPNLKPSQTSLFELY 239
Query: 221 CEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQ 280
I+ S V A++ + + + G L L IR G A E+ I
Sbjct: 240 VSYITSMILVDNSAGVAAVVDQCIELFPFKKGELKTYLIFNLIRQGKITEAELYLEKVIS 299
Query: 281 TVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTPSEEDDIELELRLARLEDLMERRLL 340
+ +F+ ++D + + EEL + ++++ ++++ + + L L L++ +
Sbjct: 300 ETKDIIEFSVLYDFWIRMEELLTQELIQKMKDDNSEKQRLFANIRLHADTLTSLIKNHTI 359
Query: 341 LLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRTYTEAVKTVDPKLAV--GKLHTLWIEF 398
LN + LR+ P+N+ W +RV+LFD D + Y +AV TVD +L G L LW ++
Sbjct: 360 RLNDLELRREPNNIKLWLERVKLFDTIS-DKAKVYADAVLTVDYRLQTTPGLLGELWCQY 418
Query: 399 GKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMARATA 458
+ +E + +E + ++ DKAT VP+ + DL VW W E L+ ++ A+++++
Sbjct: 419 CRLFE--EDIEKSEVLLDKATNVPFKFLVDLENVWLYWCEYRLKRSIDD-AIKVLSVVLE 475
Query: 459 TPARP---VAYHDEAET-VQARVYKSIKLWSLYADLEESFGTF----KAYEKGIAL-FKW 509
P + ++ E+ QA ++ S +LW++Y DL E G + AYE I +
Sbjct: 476 IPDNHELLLQKFEKGESPAQAAIFSSKRLWAMYLDLLEVKGNYGTAVNAYETAILIKAAT 535
Query: 510 PYIF---------------------------------DIWNTYLTKFLSRYGGTKLERAR 536
P +F IW+ YL L E+ R
Sbjct: 536 PAMFINYALLNESSGHQAEALAVFERSVEIFPPSVSKSIWDIYLDVALK--ADITKEQKR 593
Query: 537 DLFEQCLEACPPRYA-KTLYLLYAKLEEEHGLARHAMAVYERATGAVLP-EEMFEMFNIY 594
D+FE ++ A + + Y+ E G ++ + + + E ++
Sbjct: 594 DIFESAIKLAASGVACVSFFEKYSDFELNLGFHERSVEILHKGAKNISDLESKCTLWEEC 653
Query: 595 IKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQIC 654
I ++ + + TR++YE IE+LP + L FA +E E+ R RA+ + S++
Sbjct: 654 INRSEKQLDVNHTRKLYEECIETLPNSKAIKFLLPFAILEESRNEVARCRALLDYGSKLL 713
Query: 655 DPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQ 690
P W W++FE HG +D+ + ML+ +R ++
Sbjct: 714 KPAQNEELWDFWRNFETMHGTKDSFKNMLKARRFLE 749
>sp|Q6FUJ7|SYF1_CANGA Pre-mRNA-splicing factor SYF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SYF1
PE=3 SV=1
Length = 835
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 190/816 (23%), Positives = 329/816 (40%), Gaps = 165/816 (20%)
Query: 14 NEEDLPYEEEILRNPFSVKHWLRYIEH-----KKNAPKAI--INTIYERSLKELPGSYKL 66
++ D+ +E E+ ++P SV+ W RYI H ++ ++ I +YER + + P + +
Sbjct: 10 DDSDIAFEYELQKSP-SVEVWQRYIAHWEAQVCEDGVRSARHILWLYERMVTQFP-TLTV 67
Query: 67 WYNYLKLRRKQVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTR 126
W Y+ R+Q K Y D +ER + + K P G F ++ +
Sbjct: 68 WEQYIGWFRRQYKLD-----QYLDTFKLYERCINSV-KGP-----LGVFAVEVMLFCIST 116
Query: 127 HVFDRALRALPITQH-------HRVWPLYLSFVKSHAVPET------------------- 160
D ++ L + H R+W + L F H +P
Sbjct: 117 FDLDIIMKGLQLVLHRCNKDEVERIWNIVLGFALEHVLPSEEGPNNIDFSAFNDRNYEDL 176
Query: 161 -----------------------------AVRVFRRYLKLFPEDAEDYIEYLSSIERLDE 191
+ R YL++ ED Y E L + R +
Sbjct: 177 RLDIYKLLFLGGDQTEIEDDEEDEDVDKWTASLLRYYLQVANEDK--YDETLRLLIRTKD 234
Query: 192 AAVKLAYIVNKESFVSKHGKSNHQLWNEL-CEMISQNPDKIRSLNVD----AIIRGGLRR 246
+ + + F K GK+N + E ++ D + L +D ++ L +
Sbjct: 235 IKI-IKECFDLYIFNDKTGKNNRESKKEYDFDLYIYYLDTLDKLRLDKDYKSVFDNLLEK 293
Query: 247 YTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKR 306
Y L LAD++++ F++ + +A+ +F ++ + FE+ +
Sbjct: 294 YPQHRVLLTLKLADFHMKRADFDKMEKVLTKALSETVKTNEFIAIYTYHVNFEQAYVETI 353
Query: 307 MEEIAENDTP---------SEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEW 357
+E+ D P SE DD L L DL R LL+N + +RQNP++V W
Sbjct: 354 FDEM--RDDPEIQVQKKWKSEMDD-----HLIILGDLTSRYHLLVNDLKIRQNPNSVSNW 406
Query: 358 HKRVRLFDG--KPLDIIRTYTEAVKTVDP----KLAVGKLHTLWIEFGKFYEVNDQLEDA 411
+R LF+ K ++ + EA+KT+DP G L LW ++ K Y N E+A
Sbjct: 407 LERTTLFEDFDKKCEV---FVEAIKTIDPIKVKDKEYGMLGKLWCDYAKVYWSNKSYEEA 463
Query: 412 RLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAE 471
R I++ AT VP+ ++DL VW WA E + E AL+++ +A P + D +
Sbjct: 464 RTIYESATKVPFPDLQDLEIVWHTWAVNEFQIHNIERALKILRKALTVPPSYESIIDRFK 523
Query: 472 T------VQARVYKSIKLWSLYADLEESF------------------------------- 494
+ Q ++ S +LW+ Y DL ES
Sbjct: 524 SENRRLPSQTILFTSKRLWNYYIDLLESIPTIDANDVIRAYDTLMTLKLITPVGILNYAT 583
Query: 495 ---------GTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEA 545
G+ + YEKGI +F +++W L + + ER R+LFEQCL+
Sbjct: 584 FLKQNNNLHGSLQVYEKGINMFPPEICYELWTLLLDEVMEPAHQATKERIRELFEQCLQQ 643
Query: 546 CPPR--YAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLP-------EEMFEMFNIYIK 596
++Y+ Y+ E + L A+ + +GA P ++ +++ I
Sbjct: 644 LGNTDININSIYVKYSDFEIHNKLFSRAIDLL--MSGARRPYTNKEQLKQRVDLWESAIS 701
Query: 597 KAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDP 656
K E G RQ+ I+ LP LKF ++E L + RAR + + +Q+ P
Sbjct: 702 KCEEFLGPDSLRQLLSECIQELPNSKAITYVLKFTKLEMSLSDYTRARELLQYGAQLLPP 761
Query: 657 RVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQAQ 692
W W+ FE+ HG++ +EML +K+ ++ +
Sbjct: 762 IKNEELWGLWEQFELEHGDKSYYKEMLLLKQKLEKE 797
>sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf4 PE=1 SV=1
Length = 674
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 154/699 (22%), Positives = 260/699 (37%), Gaps = 182/699 (26%)
Query: 20 YEEEILRNPFSVKHWLRYIEHKKNAPK-AIINTIYERSLKELPGSYKLWYNYLKLRRKQV 78
+E+ I RN ++ HW+RY + + + + A +++ER+L
Sbjct: 59 FEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERAL--------------------- 97
Query: 79 KGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPI 138
DV++T+ +P +WL Y M I R++FDRA+ LP
Sbjct: 98 -----------DVDSTY---------IP-LWLKYIECEMKNRNINHARNLFDRAVTQLPR 136
Query: 139 TQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKLAY 198
++W Y+ + +VF R+LK P D ++ Y+ R E
Sbjct: 137 VD--KLWYKYVYMEEMLGNITGCRQVFERWLKWEP-DENCWMSYIRMERRYHENERARGI 193
Query: 199 IVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGH----- 253
E FV H + + L E N +R + + AI D LG
Sbjct: 194 Y---ERFVVVHPEVTNWLRWARFEEECGNAANVRQVYLAAI---------DALGQEFLNE 241
Query: 254 -LWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAE 312
+ + A + IR +ERAR I++ AI + + +++ Y FE+
Sbjct: 242 RFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSM-ELYKEYTHFEK------------ 288
Query: 313 NDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFD--GKPLD 370
+ L ++++R L LL+ +P++ W ++L + G
Sbjct: 289 ----------QFGDHLGVESTVLDKRRLQYEK-LLKDSPYDYDTWLDLLKLEESAGDINT 337
Query: 371 IIRTYTEAVKTVD---PKLAVGKLHTLWIEFGKFYEVN-DQLEDARLIFDKA-TLVPYTK 425
I TY +A+ V K A + +W+ + F E++ ++ AR ++ +A L+P+ K
Sbjct: 338 IRETYEKAIAKVPEVVEKNAWRRYVYIWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKK 397
Query: 426 VEDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWS 485
A +W +A ELR + + A + + RA +P KL+
Sbjct: 398 F-TFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKP------------------KLFR 438
Query: 486 LYADLEESFGTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCL-- 543
Y + E++ F +R R L+E+ +
Sbjct: 439 GYIEFEDAIKQF-----------------------------------DRCRILYEKWILY 463
Query: 544 --EACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEI 601
EAC P +L YA LE + G + A A+Y A + E ++ YI E
Sbjct: 464 DPEACAP------WLGYAALETKLGDSDRARALYNLAVNQPILETPELVWKAYIDFEFEE 517
Query: 602 YGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEID----------------RARA 645
K R IY++ + + P ++ + FA E E D RAR
Sbjct: 518 MEYGKARSIYQQLLRTAPH---VKVWISFANFEIAHLEDDDEEPPNEEVASPTAVVRARN 574
Query: 646 IY----AHCSQICDPRVTAGFWAAWKSFEITHGNEDTMR 680
++ AH Q AWK FE HG EDT +
Sbjct: 575 VFENALAHLRQQGLKEERVVLLEAWKQFEAMHGTEDTRK 613
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 115/308 (37%), Gaps = 69/308 (22%)
Query: 385 KLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAG 444
+LA+G W+ +G++ + AR +F++A V T + +W ++ E E++
Sbjct: 67 RLAMGH----WMRYGQWELDQKEFARARSVFERALDVDSTYI----PLWLKYIECEMKNR 118
Query: 445 QEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGTFKAYEKGI 504
A L RA R KLW Y +EE G +
Sbjct: 119 NINHARNLFDRAVTQLPR-----------------VDKLWYKYVYMEEMLGNITGCRQVF 161
Query: 505 A-LFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEE 563
KW + W +Y+ + RY ERAR ++E+ + P T +L +A+ EE
Sbjct: 162 ERWLKWEPDENCWMSYI-RMERRYHEN--ERARGIYERFVVVHP---EVTNWLRWARFEE 215
Query: 564 EHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEE-P 622
E G A + RQ+Y AI++L +E
Sbjct: 216 ECGNAAN------------------------------------VRQVYLAAIDALGQEFL 239
Query: 623 TRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREM 682
+ + FA+ E + E +RAR I+ + + + + FE G+ +
Sbjct: 240 NERFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVEST 299
Query: 683 LRIKRSVQ 690
+ KR +Q
Sbjct: 300 VLDKRRLQ 307
>sp|Q6BSP7|CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CLF1 PE=3 SV=2
Length = 714
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 115/527 (21%), Positives = 224/527 (42%), Gaps = 100/527 (18%)
Query: 22 EEILRNPFSVKHWLRYIEHKKNAPKAIINTI-------------YERSLKELPGSYKLWY 68
E+IL++ F +K + N PK I + YE+ L + ++ W
Sbjct: 19 EQILQDAFQLK------DEPLNRPKQSIQDLDELRSFQLTKRKEYEQQLNKNRLNFGQWL 72
Query: 69 NYLKLRRKQVKGKVITDPSYEDVNNTFERSL-VFMHKMPRIWLDYGRFLMDQHKITQTRH 127
Y K +V + + + FER+L V + +P W Y +F + IT R+
Sbjct: 73 RY-------AKWEVKHNHDFPRARSIFERALEVNVQHIP-FWTHYIQFELSHKNITHARN 124
Query: 128 VFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDA--EDYIEYLSS 185
+ DRA+ LP + ++W LY+ ++ + +F R+L P + + YI Y
Sbjct: 125 LLDRAVTTLP--RVDKLWFLYVQTEETLKNYQMVRIIFERWLSWNPNPSAWDAYINYEKR 182
Query: 186 IERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEM----ISQNPDKIR------SLN 235
+ D A + YI +V H S+ ++W + + + +P++++ L+
Sbjct: 183 YDEYDNA--REIYI----RYVQIH--SSGEIWLKWIDFEMNDVPIDPEQVKRIRNVFELS 234
Query: 236 VDAIIRGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYE-----EAIQTVTTVRDFTQ 290
VD+++ R L + N + + I +ERAR I++ + IQ + T Q
Sbjct: 235 VDSMLASEALRGDISLAEIINKWSLWEISVKEYERARAIFQLMLKSDTIQEIITPEQRNQ 294
Query: 291 VFDAYAQFEELSLNKRMEEIAENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQN 350
++ +Y +FE+ + ++D IE + +++R+L V ++
Sbjct: 295 IYSSYTEFEK--------------SYGDKDTIESSI-------MIKRKLKYEEEV--NKS 331
Query: 351 PHNVLEWHKRVRLFDGKPLDII--RTYTEAVKTVDP---KLAVGKLHT-LWIEFGKFYEV 404
P + W + + + + + T+ A+K + K V + + +W+++ + E
Sbjct: 332 PSDYDSWWSYISILQQEDNNEVTRETFERAIKVIPTDAFKSTVWRRYIYIWVKYAFWEEF 391
Query: 405 N-DQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARP 463
+E+ R I++KA V K A +W +A+ E+R E +A A R
Sbjct: 392 TMGSIENGRNIWNKALKVIPHKRFTFAKIWISFAQFEIRNDPENG----LASARKILGRS 447
Query: 464 VAYHDEAETVQARVYKSIKLWSLYADLEESFGTF----KAYEKGIAL 506
+ ++ TV+ + KL+ Y +LE+ G + K YEK + L
Sbjct: 448 IG---QSSTVKPKR----KLFKFYIELEQKLGEWDRVRKLYEKWLEL 487
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 119/314 (37%), Gaps = 79/314 (25%)
Query: 395 WIEFGKFYEV--NDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRL 452
W+ + K +EV N AR IF++A V + W + + EL A L
Sbjct: 71 WLRYAK-WEVKHNHDFPRARSIFERALEVNVQHI----PFWTHYIQFELSHKNITHARNL 125
Query: 453 MARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGTFKAYEKGIALFKWPYI 512
+ RA T R KLW LY EE+ ++
Sbjct: 126 LDRAVTTLPR-----------------VDKLWFLYVQTEETLKNYQM------------- 155
Query: 513 FDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAM 572
R +FE+ L P A Y+ Y K +E+ AR
Sbjct: 156 ----------------------VRIIFERWLSWNPNPSAWDAYINYEKRYDEYDNAREIY 193
Query: 573 AVYER--ATGAVLPEEM-FEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLK 629
Y + ++G + + + FEM ++ I + + R ++E +++S+ + +
Sbjct: 194 IRYVQIHSSGEIWLKWIDFEMNDVPIDPEQ----VKRIRNVFELSVDSMLASEALRGDIS 249
Query: 630 FAEM-------ETKLGEIDRARAIYA------HCSQICDPRVTAGFWAAWKSFEITHGNE 676
AE+ E + E +RARAI+ +I P ++++ FE ++G++
Sbjct: 250 LAEIINKWSLWEISVKEYERARAIFQLMLKSDTIQEIITPEQRNQIYSSYTEFEKSYGDK 309
Query: 677 DTMREMLRIKRSVQ 690
DT+ + IKR ++
Sbjct: 310 DTIESSIMIKRKLK 323
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 18 LPYEEEILRNPFSVKHWLRYIE-HKKNAPKAIINTIYERSLKELP-GSYK--LWYNYLKL 73
L YEEE+ ++P W YI ++ + +ER++K +P ++K +W Y+ +
Sbjct: 322 LKYEEEVNKSPSDYDSWWSYISILQQEDNNEVTRETFERAIKVIPTDAFKSTVWRRYIYI 381
Query: 74 RRKQVKGKVITDPSYEDVNNTFERSL-VFMHK---MPRIWLDYGRFLM---DQHKITQTR 126
K + T S E+ N + ++L V HK +IW+ + +F + ++ + R
Sbjct: 382 WVKYAFWEEFTMGSIENGRNIWNKALKVIPHKRFTFAKIWISFAQFEIRNDPENGLASAR 441
Query: 127 HVFDRAL-RALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKL 171
+ R++ ++ + +++ Y+ + + +++ ++L+L
Sbjct: 442 KILGRSIGQSSTVKPKRKLFKFYIELEQKLGEWDRVRKLYEKWLEL 487
>sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1
PE=3 SV=1
Length = 705
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 35/311 (11%)
Query: 389 GKLHTLWIEFGKFYEVNDQLEDARLIFDKAT-LVPYTKVEDLATVWCEWAELELRAGQEE 447
G L+I F KF E ++E AR+I+ A VP ++ +DL + + +++
Sbjct: 243 GNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSRAKDLFDTFTNF--------EKQ 294
Query: 448 AALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFG----TFKAYEKG 503
R+ + Y +E + + K+ +W Y +EE G T + YE+
Sbjct: 295 HGDRIGIEDVVLGKKRFQYEEEIK----KNSKNYDIWFDYLKMEEINGEIEKTREIYERS 350
Query: 504 IALF-------KWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPR---YAKT 553
I W +W Y +ERAR ++ +C++ P + ++K
Sbjct: 351 IGNLPPTNEKKHWKRYIYLWINYA--LFEELISKDMERARSVYSECIKLIPHKEFSFSK- 407
Query: 554 LYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYER 613
+++LYA E A +Y +A G ++F+ YI E+ + R +YE+
Sbjct: 408 IWILYANFEIRQLNLDKARLIYGQAIGRNPKSKIFDQ---YIHLEIELGNFDRVRTLYEK 464
Query: 614 AIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITH 673
+E +P+ C KFA++ET+LGE RARAI+ Q + W + EI
Sbjct: 465 YLEIMPDN-CDAWC-KFAQLETELGETVRARAIFELAIQQPNLDRPEVVWKDFIDSEIQL 522
Query: 674 GNEDTMREMLR 684
D ++++ R
Sbjct: 523 KQFDFVKQLYR 533
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 51/331 (15%)
Query: 390 KLHTLWIEFGKFYEVNDQLEDARLIFDKAT-LVPYTKVEDLATVWCEWAELELRAGQEEA 448
++ T+WI++ + N + AR I+D+A L+P ++ +W ++ +E G A
Sbjct: 107 RIPTVWIKYAEMEMKNKNINLARNIWDRAVCLLP-----RVSQLWFKYTFMEDMLGNYPA 161
Query: 449 ALRLMARATATPARPVAYHDEAETVQ---------------ARVYKSIKLWSLYADLEES 493
A + R P A++ + Q V+ IK W Y EE
Sbjct: 162 ARAIFERWMQWKPEPQAWNSYLKFEQRLKLFENTRLIFEKYILVHPYIKTWIKYTKFEER 221
Query: 494 FGTFKA----YEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPR 549
G + +++ I + KF +Y ++ERAR +++ ++ P
Sbjct: 222 LGNIENARTIFQRAIEFLGEDGNDEQLFIAFAKFEEKY--KEIERARVIYKYAIDHVPKS 279
Query: 550 YAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEM------FEMFNIYIKKAAEIYG 603
AK L+ + E++HG V EE+ ++++ Y+K EI G
Sbjct: 280 RAKDLFDTFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLK-MEEING 338
Query: 604 -IPKTRQIYERAIESLPEEPTRQ---------MCLKFAEMETKLG-EIDRARAIYAHCSQ 652
I KTR+IYER+I +LP PT + + + +A E + +++RAR++Y+ C +
Sbjct: 339 EIEKTREIYERSIGNLP--PTNEKKHWKRYIYLWINYALFEELISKDMERARSVYSECIK 396
Query: 653 ICDPRVTAGF---WAAWKSFEITHGNEDTMR 680
+ P F W + +FEI N D R
Sbjct: 397 LI-PHKEFSFSKIWILYANFEIRQLNLDKAR 426
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 119/306 (38%), Gaps = 71/306 (23%)
Query: 390 KLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAA 449
K ++I++ + E L AR +F++ + + + TVW ++AE+E++ A
Sbjct: 73 KTAAIYIKYAAWEESQKDLTRARSVFERFLDIDHR----IPTVWIKYAEMEMKNKNINLA 128
Query: 450 LRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGTFKAYEKGIALF-- 507
+ RA R +LW Y +E+ G + A A+F
Sbjct: 129 RNIWDRAVCLLPRVS-----------------QLWFKYTFMEDMLGNYPA---ARAIFER 168
Query: 508 --KWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEH 565
+W WN+YL KF R E R +FE+ + P Y KT ++ Y K EE
Sbjct: 169 WMQWKPEPQAWNSYL-KFEQRL--KLFENTRLIFEKYILVHP--YIKT-WIKYTKFEERL 222
Query: 566 GLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPT-R 624
G I R I++RAIE L E+
Sbjct: 223 G------------------------------------NIENARTIFQRAIEFLGEDGNDE 246
Query: 625 QMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLR 684
Q+ + FA+ E K EI+RAR IY + + + +FE HG+ + +++
Sbjct: 247 QLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSRAKDLFDTFTNFEKQHGDRIGIEDVVL 306
Query: 685 IKRSVQ 690
K+ Q
Sbjct: 307 GKKRFQ 312
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 189/496 (38%), Gaps = 102/496 (20%)
Query: 93 NTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPLYLSFV 152
+ FER L H++P +W+ Y M I R+++DRA+ LP + ++W Y +F+
Sbjct: 96 SVFERFLDIDHRIPTVWIKYAEMEMKNKNINLARNIWDRAVCLLP--RVSQLWFKY-TFM 152
Query: 153 KSHAVPETAVR-VFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKLAYIVNKESFVSKHGK 211
+ A R +F R+++ PE + + YL +RL + I K V + K
Sbjct: 153 EDMLGNYPAARAIFERWMQWKPE-PQAWNSYLKFEQRL-KLFENTRLIFEKYILVHPYIK 210
Query: 212 SNHQLWNELCEMISQ--NPDKIRSLNVDAIIRGGLRRYTDQLGHLWNSLADYYIRSGLFE 269
+ W + + + N + R++ AI G +Q L+ + A + + E
Sbjct: 211 T----WIKYTKFEERLGNIENARTIFQRAIEFLGEDGNDEQ---LFIAFAKFEEKYKEIE 263
Query: 270 RARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTPSEEDDIELELRLA 329
RAR IY+ AI V R +FD + FE+ D ED + + R
Sbjct: 264 RARVIYKYAIDHVPKSRA-KDLFDTFTNFEK----------QHGDRIGIEDVVLGKKRFQ 312
Query: 330 RLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRL--FDGKPLDIIRTYTEAVKTVDP--- 384
E+ +++N N W +++ +G+ Y ++ + P
Sbjct: 313 YEEE-------------IKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNE 359
Query: 385 KLAVGKLHTLWIEFGKFYE-VNDQLEDARLIFDKAT-LVPYTKVEDLATVWCEWAELELR 442
K + LWI + F E ++ +E AR ++ + L+P+ + + +W +A E+R
Sbjct: 360 KKHWKRYIYLWINYALFEELISKDMERARSVYSECIKLIPHKEF-SFSKIWILYANFEIR 418
Query: 443 AGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGTFKAYEK 502
+ A + +A + K++ Y LE G F
Sbjct: 419 QLNLDKARLIYGQAIGRNPKS------------------KIFDQYIHLEIELGNF----- 455
Query: 503 GIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLE 562
+R R L+E+ LE P + +A+LE
Sbjct: 456 ------------------------------DRVRTLYEKYLEIMPDNC--DAWCKFAQLE 483
Query: 563 EEHGLARHAMAVYERA 578
E G A A++E A
Sbjct: 484 TELGETVRARAIFELA 499
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 109/521 (20%), Positives = 208/521 (39%), Gaps = 94/521 (18%)
Query: 13 ENEEDLPYEEEILRNPFSVKH-----WLRYIEHK-KNAPKAIINTIYERSLKELPGSYKL 66
E+++DL + + H W++Y E + KN + I++R++ LP +L
Sbjct: 86 ESQKDLTRARSVFERFLDIDHRIPTVWIKYAEMEMKNKNINLARNIWDRAVCLLPRVSQL 145
Query: 67 WYNYLKLRRKQVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTR 126
W+ Y + + + G +Y FER + + + P+ W Y +F TR
Sbjct: 146 WFKYTFM--EDMLG------NYPAARAIFERWMQWKPE-PQAWNSYLKFEQRLKLFENTR 196
Query: 127 HVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAED---YIEYL 183
+F++ + P + + W Y F + E A +F+R ++ ED D +I +
Sbjct: 197 LIFEKYILVHP---YIKTWIKYTKFEERLGNIENARTIFQRAIEFLGEDGNDEQLFIAFA 253
Query: 184 SSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGG 243
E+ E ++ A ++ K + L++ Q+ D+I ++ ++ G
Sbjct: 254 KFEEKYKE--IERARVIYKYAIDHVPKSRAKDLFDTFTNFEKQHGDRI---GIEDVVLGK 308
Query: 244 LR-RYTDQLGH------LWNSLADYYIRSGLFERARDIYEEAIQTVTTVRD------FTQ 290
R +Y +++ +W +G E+ R+IYE +I + + +
Sbjct: 309 KRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIY 368
Query: 291 VFDAYAQFEELSLNKRMEEIAENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQN 350
++ YA FEEL ++K ME R + S ++
Sbjct: 369 LWINYALFEEL-ISKDME-----------------------------RARSVYSECIKLI 398
Query: 351 PHNVLEWHKRVRL---FDGKPLDIIRT---YTEAVKTVDPKLAVGKLHT-LWIEFGKFYE 403
PH + K L F+ + L++ + Y +A+ +PK + + L IE G F
Sbjct: 399 PHKEFSFSKIWILYANFEIRQLNLDKARLIYGQAIGR-NPKSKIFDQYIHLEIELGNFDR 457
Query: 404 VNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMARATATPA-- 461
V R +++K + + D WC++A+LE G+ A + A P
Sbjct: 458 V-------RTLYEKYLEI----MPDNCDAWCKFAQLETELGETVRARAIFELAIQQPNLD 506
Query: 462 RP-VAYHDEAET-VQARVYKSIKLWSLYADLEESFGTFKAY 500
RP V + D ++ +Q + + +K LY L E K +
Sbjct: 507 RPEVVWKDFIDSEIQLKQFDFVK--QLYRKLLEKTNHVKVW 545
Score = 33.5 bits (75), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 9/137 (6%)
Query: 534 RARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNI 593
R R +E L R +Y+ YA EE A +V+ER + + ++
Sbjct: 59 RKRQQYESLL--GRNRKTAAIYIKYAAWEESQKDLTRARSVFERFLD--IDHRIPTVWIK 114
Query: 594 YIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQI 653
Y + + I R I++RA+ LP Q+ K+ ME LG ARAI+ Q
Sbjct: 115 YAEMEMKNKNINLARNIWDRAVCLLPR--VSQLWFKYTFMEDMLGNYPAARAIFERWMQ- 171
Query: 654 CDPRVTAGFWAAWKSFE 670
P A W ++ FE
Sbjct: 172 WKPEPQA--WNSYLKFE 186
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 192/494 (38%), Gaps = 90/494 (18%)
Query: 20 YEEEILRNPFSVKHWLRYIEHK-KNAPKAIINTIYERSLKELPGSYKLWYNYLKLRRKQV 78
YE + RN + W+RY + + + A +++ER+L+ W Y++ ++
Sbjct: 55 YEGALRRNRLNTGQWMRYAQWELEQREFARARSVFERALEVNSTHVPTWIRYIQC---EL 111
Query: 79 KGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPI 138
K K I N +R++ + ++ ++W Y I R VF+R + P
Sbjct: 112 KEKNINH-----ARNLLDRAVTLLPRVDKLWFTYVATEETLGNIAGCRAVFERWMHWRPP 166
Query: 139 TQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKLAY 198
W Y++ K + + A + RRY+ + P
Sbjct: 167 VT---AWAAYVNMEKRYREFDRARGILRRYVTVHP------------------------- 198
Query: 199 IVNKESFVSKHGKSNHQLWNELCEMISQNPDKIR---SLNVDAIIR---GGLRRYTDQLG 252
G W + EM + N D +R +L +D ++ GG+ + L
Sbjct: 199 -----------GAPAWNKWAKF-EMEAGNRDTVREVYALGIDTLVEMAHGGVDFLDESLL 246
Query: 253 HLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAE 312
W A + R +ERAR +Y ++ + + +++ Y FE+ K E E
Sbjct: 247 AGW---ASFETRHREYERARALYTYGLEKLPKSKS-AKLYADYTAFEKQYGAK---EGIE 299
Query: 313 NDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLF--DGKPLD 370
N + L R ++ ED L+++P + W + L G D
Sbjct: 300 N--------VVLTKRRSKYEDQ------------LKEDPADYDTWFSYITLGQESGLEAD 339
Query: 371 IIR-TYTEAVKTVDP--KLAVGKLHTLWIEFGKFYEV-NDQLEDARLIFDKA-TLVPYTK 425
IR + AV V P K + LWI++ + E+ N ++E AR I+ +++P+ K
Sbjct: 340 QIREIFERAVSNVPPHSKRLWRRYIFLWIKYAIWEELENKEVEKAREIYKTCISIIPHKK 399
Query: 426 VEDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWS 485
A VW WA+ E+R G A +++ R A + ++A++ + +
Sbjct: 400 F-TFAKVWLLWAKFEIRHGNLPEARKILGRGLGMSGGKPALYKGYIALEAKLREFDRCRK 458
Query: 486 LYADLEESFGTFKA 499
LY E F F A
Sbjct: 459 LYDKYVEKFAEFAA 472
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 533 ERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEM----- 587
ERAR L+ LE P + LY Y E+++G V + +++
Sbjct: 260 ERARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEGIENVVLTKRRSKYEDQLKEDPA 319
Query: 588 -FEMFNIYIKKAAEIYGIP--KTRQIYERAIESLPEEPTRQ------MCLKFA---EMET 635
++ + YI E G+ + R+I+ERA+ ++P R + +K+A E+E
Sbjct: 320 DYDTWFSYITLGQES-GLEADQIREIFERAVSNVPPHSKRLWRRYIFLWIKYAIWEELEN 378
Query: 636 KLGEIDRARAIYAHCSQICDPR--VTAGFWAAWKSFEITHGNEDTMREML 683
K E+++AR IY C I + A W W FEI HGN R++L
Sbjct: 379 K--EVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKIL 426
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 30/201 (14%)
Query: 510 PYIFDIWNTYLT--KFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYL----LYAKLEE 563
P + +W TY+ + L G R +FE+ + PP A Y+ Y + +
Sbjct: 131 PRVDKLWFTYVATEETLGNIAG-----CRAVFERWMHWRPPVTAWAAYVNMEKRYREFDR 185
Query: 564 EHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEP- 622
G+ R + V+ A +N + K E R++Y I++L E
Sbjct: 186 ARGILRRYVTVHPGAPA----------WNKWAKFEMEAGNRDTVREVYALGIDTLVEMAH 235
Query: 623 ------TRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNE 676
+ +A ET+ E +RARA+Y + + +A +A + +FE +G +
Sbjct: 236 GGVDFLDESLLAGWASFETRHREYERARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAK 295
Query: 677 DTMREMLRIKRSVQAQYNTQV 697
+ + ++ KR +++Y Q+
Sbjct: 296 EGIENVVLTKR--RSKYEDQL 314
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 17/175 (9%)
Query: 533 ERARDLFEQCLEACPPR---YAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPE-EMF 588
ER R +++ LE P + +AK +++LYA+ E + + +++ RA G + +
Sbjct: 552 ERTRQVYQASLELIPHKKFTFAK-MWILYAQFE----IRQKNLSLARRALGTSIGKCPKN 606
Query: 589 EMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYA 648
++F +YI+ ++ + R++YE+ +E PE T +KFAE+ET LG+IDRARAIY
Sbjct: 607 KLFKVYIELELQLREFDRCRKLYEKFLEFGPENCT--SWIKFAELETILGDIDRARAIYE 664
Query: 649 HCSQICDPRVTAG--FWAAWKSFEITHGNEDTMREMLRIKRSVQAQYNTQVLFTF 701
I PR+ W ++ FEI + R + R R +Q + +V +F
Sbjct: 665 LA--ISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYR--RLLQRTQHVKVWISF 715
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 141/700 (20%), Positives = 264/700 (37%), Gaps = 170/700 (24%)
Query: 20 YEEEILRNPFSVKHWLRYIEHKKNAPK-AIINTIYERSLKELPGSYKLWYNY--LKLRRK 76
+E+ I +N + +W++Y + +++ + +IYER+L + LW Y ++++ +
Sbjct: 231 FEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNR 290
Query: 77 QVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRAL 136
QV N ++R++ + ++ + W Y + R VF+R +
Sbjct: 291 QVN----------HARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQ 340
Query: 137 PITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKL 196
P Q W Y++F + + A ++ R++ + P D +++I+Y
Sbjct: 341 PEEQ---AWHSYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYA------------- 383
Query: 197 AYIVNKESFVSKHGKSNH--QLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHL 254
F KH H +++ E + D+ HL
Sbjct: 384 -------RFEEKHAYFAHARKVYERAVEFFGDE-------------------HMDE--HL 415
Query: 255 WNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAEND 314
+ + A + FER R IY+ A+ ++ +D ++F Y FE+ ++R
Sbjct: 416 YVAFAKFEENQKEFERVRVIYKYALDRISK-QDAQELFKNYTIFEKKFGDRRG------- 467
Query: 315 TPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLF--DGKPLDII 372
+ED++ + ++ NPHN W +RL D + +
Sbjct: 468 ----------------IEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVR 511
Query: 373 RTYTEAVKTVDP---KLAVGKLHTLWIEFGKFYEVNDQ-LEDARLIFDKA-TLVPYTKVE 427
Y A+ V P K + LWI + + E+ + E R ++ + L+P+ K
Sbjct: 512 EVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKF- 570
Query: 428 DLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLY 487
A +W +A+ E+R + L L RA T + KL+ +Y
Sbjct: 571 TFAKMWILYAQFEIR----QKNLSLARRALGTSIGKCPKN--------------KLFKVY 612
Query: 488 ADLEESFGTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACP 547
+LE F +R R L+E+ LE P
Sbjct: 613 IELELQLREF-----------------------------------DRCRKLYEKFLEFGP 637
Query: 548 PRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAV---LPEEMFEMFNIYIKKAAEIYGI 604
T ++ +A+LE G A A+YE A +PE +++ YI E
Sbjct: 638 ENC--TSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKS---YIDFEIEQEET 692
Query: 605 PKTRQIYERAIESLPEEPTRQMCLKFAEME---TKLGEIDRARAIYAHCSQI---CDPRV 658
+TR +Y R ++ ++ + FA+ E K G + + R IY ++ C+ +
Sbjct: 693 ERTRNLYRRLLQRTQH---VKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRNCEEKE 749
Query: 659 TA-GFWAAWKSFEITHGN-------EDTMREMLRIKRSVQ 690
+W+SFE G + M E ++ +R VQ
Sbjct: 750 ERLMLLESWRSFEEEFGTASDKERVDKLMPEKVKKRRKVQ 789
>sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2
Length = 702
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 533 ERARDLFEQCLEACPPR---YAKTLYLLYAKLE---EEHGLARHAMAVYERATGAVLPEE 586
ER R +++ CLE P + ++K L+LLYA+ E +E AR A+ + A G + P +
Sbjct: 386 ERTRQIYKTCLELIPHKQFTFSK-LWLLYAQFEIRCKELQRARKALGL---AIG-MCPRD 440
Query: 587 MFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAI 646
++F YI ++ + R +YE+ +E PE M KFAE+E LG+ DRARAI
Sbjct: 441 --KLFRGYIDLEIQLREFERCRMLYEKFLEFGPENCVTWM--KFAELENLLGDTDRARAI 496
Query: 647 YAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREM 682
+ Q + W A+ FE+ G + R++
Sbjct: 497 FELAVQQPRLDMPELLWKAYIDFEVALGETELARQL 532
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 132/628 (21%), Positives = 225/628 (35%), Gaps = 145/628 (23%)
Query: 93 NTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPLYLSFV 152
+ +ER+L H+ +WL Y M ++ R+++DRA+ +P ++ W Y
Sbjct: 97 SIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRV--NQFWYKYTYME 154
Query: 153 KSHAVPETAVRVFRRYLKLFPEDA--EDYIEYLSSIERLDEAAVKLAYIVNKESFVSKHG 210
+ A +VF R+++ PE+ + Y+ + + +D A + Y E FV H
Sbjct: 155 EMLENVAGARQVFERWMEWQPEEQAWQTYVNFELRYKEIDRA--REIY----ERFVYVHP 208
Query: 211 KSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWNSLADYYIRSGLF-- 268
+ W + R I G R + + D YI LF
Sbjct: 209 DVKN--WIKFA----------RFEESHGFIHGSRRVFERAV----EFFGDDYIEERLFIA 252
Query: 269 -----------ERARDIYEEAIQTVTTVRDFTQ-VFDAYAQFEELSLNKRMEEIAENDTP 316
+RAR IY+ A+ + +D TQ +F AY + E+ ++
Sbjct: 253 FARFEEGQKEHDRARIIYKYALDHLP--KDRTQELFKAYTKHEKKYGDR----------- 299
Query: 317 SEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLF--DGKPLDIIRT 374
A +ED++ + + NP N W +RL +G I T
Sbjct: 300 ------------AGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRET 347
Query: 375 YTEAVKTVDP---KLAVGKLHTLWIEFGKFYEVN-DQLEDARLIFDKA-TLVPYTKVEDL 429
Y A+ V P K + LWI + + E+ + E R I+ L+P+ +
Sbjct: 348 YERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLELIPHKQF-TF 406
Query: 430 ATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYAD 489
+ +W +A+ E+R + + A + + A R KL+ Y D
Sbjct: 407 SKLWLLYAQFEIRCKELQRARKALGLAIGMCPRD------------------KLFRGYID 448
Query: 490 LEESFGTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPR 549
LE F ER R L+E+ LE P
Sbjct: 449 LEIQLREF-----------------------------------ERCRMLYEKFLEFGPEN 473
Query: 550 YAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQ 609
++ +A+LE G A A++E A + ++ YI + RQ
Sbjct: 474 C--VTWMKFAELENLLGDTDRARAIFELAVQQPRLDMPELLWKAYIDFEVALGETELARQ 531
Query: 610 IYERAIESLPEEPTRQMCLKFAEMETKLGEIDR----------ARAIYAHCS----QICD 655
+YER +E ++ + FA+ E L D AR IY + Q+ D
Sbjct: 532 LYERLLERTQHV---KVWMSFAKFEMGLSHGDSGPDAELNVQLARRIYERANEMLRQLGD 588
Query: 656 PRVTAGFWAAWKSFEITHGNEDTMREML 683
AW+ FE + M++++
Sbjct: 589 KESRVLLLEAWRDFERDASDSQEMQKVM 616
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 20 YEEEILRNPFSVKHWLRYIEHKKNAPKAI-INTIYERSLKELPGSYKLWYNY--LKLRRK 76
+E+ + +N V HW++Y + ++ + +I+ER+L + LW Y ++++ K
Sbjct: 65 FEDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNK 124
Query: 77 QVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRAL 136
QV N ++R++ M ++ + W Y + R VF+R +
Sbjct: 125 QVNH----------ARNLWDRAVTIMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQ 174
Query: 137 PITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEY 182
P Q W Y++F + + A ++ R++ + P D +++I++
Sbjct: 175 PEEQ---AWQTYVNFELRYKEIDRAREIYERFVYVHP-DVKNWIKF 216
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 153/380 (40%), Gaps = 59/380 (15%)
Query: 30 SVKHWLRYIEHK-KNAPKAIINTIYERSLKELPGSYKLWYNYLKLRR--KQVKGK----- 81
+V WL+Y E + KN +++R++ +P + WY Y + + V G
Sbjct: 109 NVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYMEEMLENVAGARQVFE 168
Query: 82 ---------------VITDPSYEDVNNTFE--RSLVFMHKMPRIWLDYGRFLMDQHKITQ 124
V + Y++++ E V++H + W+ + RF I
Sbjct: 169 RWMEWQPEEQAWQTYVNFELRYKEIDRAREIYERFVYVHPDVKNWIKFARFEESHGFIHG 228
Query: 125 TRHVFDRALRALPITQ-HHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPED--AEDYIE 181
+R VF+RA+ R++ + F + + A +++ L P+D E +
Sbjct: 229 SRRVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARIIYKYALDHLPKDRTQELFKA 288
Query: 182 YLSSIERLDEAAVKLAYIVNKESFVSKH----GKSNHQLWNELCEMISQ--NPDKIRSLN 235
Y ++ + A IV+K + + +N+ W + +I + D+IR
Sbjct: 289 YTKHEKKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETY 348
Query: 236 VDAII-------RGGLRRYTDQLGHLWNSLADY-YIRSGLFERARDIYEEAIQTVTTVR- 286
AI + RRY +LW + A Y + + ER R IY+ ++ + +
Sbjct: 349 ERAISNVPPANEKNFWRRYI----YLWINYALYEELEAEDAERTRQIYKTCLELIPHKQF 404
Query: 287 DFTQVFDAYAQFE----ELSLNKRMEEIAENDTPSEE---DDIELELRLARLEDLMERRL 339
F++++ YAQFE EL ++ +A P ++ I+LE++L E R
Sbjct: 405 TFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDKLFRGYIDLEIQLREFE-----RC 459
Query: 340 LLLNSVLLRQNPHNVLEWHK 359
+L L P N + W K
Sbjct: 460 RMLYEKFLEFGPENCVTWMK 479
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 114/291 (39%), Gaps = 62/291 (21%)
Query: 20 YEEEILRNPFSVKHWLRYIEH-KKNAPKAIINTIYERSLKELPGSYKLWYNYLKLRRKQV 78
YE+E+ NP + W Y+ + + I YER++ +P
Sbjct: 314 YEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVP----------------- 356
Query: 79 KGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRF-LMDQHKITQTRHVFDRALRALP 137
P+ E F R +++ W++Y + ++ +TR ++ L +P
Sbjct: 357 -------PANE---KNFWRRYIYL------WINYALYEELEAEDAERTRQIYKTCLELIP 400
Query: 138 ITQ--HHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDA--EDYIEY---LSSIERLD 190
Q ++W LY F + A + + + P D YI+ L ER
Sbjct: 401 HKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDKLFRGYIDLEIQLREFER-- 458
Query: 191 EAAVKLAYIVNKESFVSKHGKSNHQLWNELCEM--ISQNPDKIRSLNVDAIIRGGLRRYT 248
++ Y E F+ + G N W + E+ + + D+ R++ A+ + L
Sbjct: 459 ---CRMLY----EKFL-EFGPENCVTWMKFAELENLLGDTDRARAIFELAVQQPRL---- 506
Query: 249 DQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE 299
D LW + D+ + G E AR +YE ++ V+ V+ ++A+FE
Sbjct: 507 DMPELLWKAYIDFEVALGETELARQLYERLLERTQHVK----VWMSFAKFE 553
>sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis
GN=CLF1 PE=3 SV=1
Length = 677
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 153/681 (22%), Positives = 263/681 (38%), Gaps = 137/681 (20%)
Query: 20 YEEEILRNPFSVKHWLRYIE---HKKNAPKAIINTIYERSLKELPGSYKLWYNYLKLRRK 76
+E+ + RN S+ +W+RY + +K +A +++ER+L P + LW Y++
Sbjct: 61 FEDYVRRNRISMNNWMRYAQWELEQKEFRRA--RSVFERALDVDPTAVVLWIRYIEA--- 115
Query: 77 QVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRAL 136
++K + I N +R++ ++ ++W Y I TR VF+R +
Sbjct: 116 EMKTRNINH-----ARNLLDRAVTIYSRVDKLWYKYVYMEEMLGNIPGTRQVFERWMSWE 170
Query: 137 PITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKL 196
P W Y+ K + + +F R+ + PE +++I++
Sbjct: 171 P---DEGAWGAYIKLEKRYNEFDRVRAIFERFTVVHPE-PKNWIKWAR------------ 214
Query: 197 AYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWN 256
F ++G S D +R + AI G + D+ L+
Sbjct: 215 --------FEEEYGTS----------------DMVREVYGLAIETLG-EDFMDE--KLFI 247
Query: 257 SLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTP 316
+ A Y + FERAR IY+ A+ + + + AY FE+ D
Sbjct: 248 AYARYEAKLKEFERARAIYKYALDRLPRAKSVA-LHKAYTTFEKQF----------GDRE 296
Query: 317 SEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFD--GKPLDIIRT 374
ED I L +RR+ + ++NP N W VRL + G +
Sbjct: 297 GVEDVI-----------LSKRRVQYEEQI--KENPKNYDIWFDFVRLEESSGDVERVRDV 343
Query: 375 YTEAVKTVDP---KLAVGKLHTLWIEFGKFYEVNDQ-LEDARLIFDKAT-LVPYTKVEDL 429
Y A+ + P K + LWI + + E+ + +E A I+ + L+P+ K
Sbjct: 344 YERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKF-TF 402
Query: 430 ATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYAD 489
A +W A+ E+R +AA + + A + KL+ Y D
Sbjct: 403 AKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKD------------------KLFKGYID 444
Query: 490 LEESFGTF----KAYEKGIALFKW-PYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLE 544
LE F K +EK I +W P W + L R G ++RAR ++E +
Sbjct: 445 LERQLFEFVRCRKLFEKQI---EWSPSNCQAWIKFAE--LER-GLDDIDRARAIYELGIS 498
Query: 545 ACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGI 604
+ L+ Y EE G A+YER E ++I A I
Sbjct: 499 QPVLDMPELLWKSYIDFEEYEGEYDRTRALYERLL------EKTNHVKVWINFARFEINI 552
Query: 605 PKTRQIYERAI-ESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFW 663
P+ + E + + EE R+ + F +RA ++ ++ + RV
Sbjct: 553 PEGEEEDEDEEEKPVSEEAKRRARMVF----------ERAHKVFKE-KEMKEERV--ALL 599
Query: 664 AAWKSFEITHGNEDTMREMLR 684
AWKSFE THG+ D + ++ R
Sbjct: 600 NAWKSFEQTHGSPDDIAKIER 620
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 124/308 (40%), Gaps = 73/308 (23%)
Query: 395 WIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMA 454
W+ + ++ + AR +F++A V T V +W + E E++ A L+
Sbjct: 75 WMRYAQWELEQKEFRRARSVFERALDVDPTAV----VLWIRYIEAEMKTRNINHARNLLD 130
Query: 455 RATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFG----TFKAYEKGIALFKWP 510
RA T+ +RV KLW Y +EE G T + +E+ ++ W
Sbjct: 131 RAV--------------TIYSRV---DKLWYKYVYMEEMLGNIPGTRQVFERWMS---WE 170
Query: 511 YIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARH 570
W Y+ K RY + +R R +FE+ P ++ +A+ EEE+G +
Sbjct: 171 PDEGAWGAYI-KLEKRYN--EFDRVRAIFERFTVVHP---EPKNWIKWARFEEEYGTS-- 222
Query: 571 AMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEE-PTRQMCLK 629
E+YG+ AIE+L E+ ++ +
Sbjct: 223 -------------------------DMVREVYGL---------AIETLGEDFMDEKLFIA 248
Query: 630 FAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSV 689
+A E KL E +RARAIY + + A+ +FE G+ + + +++ KR V
Sbjct: 249 YARYEAKLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRV 308
Query: 690 QAQYNTQV 697
QY Q+
Sbjct: 309 --QYEEQI 314
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 141/618 (22%), Positives = 240/618 (38%), Gaps = 104/618 (16%)
Query: 88 YEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPL 147
YE + FER+L + +W+ Y + I R++FDRA+ LP +W
Sbjct: 91 YERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDA--LWYK 148
Query: 148 YLSFVKSHAVPETAVRVFRRYLKLFPEDA--EDYIEYLSSIERLDEAAVKLAYIVNKESF 205
Y+ + A ++F R+++ P D + YI+ LD A+ + +
Sbjct: 149 YVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRASA-----IYERWI 203
Query: 206 VSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAI-IRGGLRRYTDQLGHLWNSLADYYIR 264
+ N W + E Q PDK R + A+ G ++ ++ + A R
Sbjct: 204 ACRPIPKNWVTWAKFEEDRGQ-PDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETR 262
Query: 265 SGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE---------ELS-LNKRM----EEI 310
FERAR IY+ A+ + + ++ Y +FE EL+ L KR EE+
Sbjct: 263 LKEFERARVIYKFALARLPRSKS-ASLYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEEL 321
Query: 311 AENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLD 370
A + T + + LARLE+ R R++ +V +P+
Sbjct: 322 AYDPT-----NYDAWFSLARLEEDAYR--------ADREDGEDV------------EPMR 356
Query: 371 IIRTYTEAVKTVDPKLAV---GKLHTLWIEFGKFYEVNDQLED-ARLIFDKAT-LVPYTK 425
+ Y AV V P L + LW+++ F E++ + D AR ++ A LVP+ K
Sbjct: 357 VREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPH-K 415
Query: 426 VEDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWS 485
A +W +A E+R AA +++ +P + E ++ R+ + ++ +
Sbjct: 416 TFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIE-LEMRLREFDRVRT 474
Query: 486 LYADLEESFGTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEA 545
LY E F T+ P + W + T+ S ER R +FE ++
Sbjct: 475 LY----EKFLTYD-----------PSLSSAWIQW-TQVES--AVEDFERVRAIFELAVQQ 516
Query: 546 CPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIP 605
+ ++ Y E G A +YER E ++I A
Sbjct: 517 SLD-MPEIVWKAYIDFEAGEGERERARNLYERLL------ERTSHVKVWISYA------- 562
Query: 606 KTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAI----YAHCSQICDPRVTAG 661
+ E A E+ E+E + G+ D AR + Y + A
Sbjct: 563 ----LMEIATLGGGEDEDGN------EIEGEAGDADLARQVFERGYKDLRAKGEKEDRAV 612
Query: 662 FWAAWKSFEITHGNEDTM 679
+WKSFE HG+E+T+
Sbjct: 613 LLESWKSFEQEHGDEETL 630
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 28/225 (12%)
Query: 479 KSIKLWSLYADLEESFGTFK----AYEKGIALFKWPYIFDIWN--TYLTKFLSRYGGTKL 532
+S+ LW Y D+E +++ I L P + +W YL + L G
Sbjct: 107 RSVDLWIKYTDMELKARNINHARNLFDRAITLL--PRVDALWYKYVYLEELLLNVSG--- 161
Query: 533 ERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGA-VLPEEMFEMF 591
AR +FE+ ++ P A + Y KLEE + A A+YER +P+
Sbjct: 162 --ARQIFERWMQWEPNDKA---WQSYIKLEERYNELDRASAIYERWIACRPIPKNW---- 212
Query: 592 NIYIKKAAEIYGIP-KTRQIYERAIESLPEE-----PTRQMCLKFAEMETKLGEIDRARA 645
+ K E G P K R++++ A+E +E + + FA MET+L E +RAR
Sbjct: 213 -VTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETRLKEFERARV 271
Query: 646 IYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQ 690
IY +A +A + FE HG+ + + KR +Q
Sbjct: 272 IYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKRRIQ 316
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 126/324 (38%), Gaps = 66/324 (20%)
Query: 18 LPYEEEILRNPFSVKHWLRYIEHKKNAPKAI-----------INTIYERSLKELPGSY-- 64
+ YEEE+ +P + W +++A +A + +YER++ +P +
Sbjct: 315 IQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEK 374
Query: 65 KLWYNYLKLRRKQVKGKVITDPSYEDVNNTFERSLVFM-HK---MPRIWLDYGRFLMDQH 120
+ W Y+ L + + I Y+ + ++ ++ + HK ++WL Y F + +
Sbjct: 375 RYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRL 434
Query: 121 KITQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYI 180
++ R V + P + L+ +++ E +R F R L+ E ++
Sbjct: 435 DVSAARKVLGAGIGMCPKPK------LFTGYIEL----EMRLREFDRVRTLY----EKFL 480
Query: 181 EYLSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAII 240
Y S+ W + ++ S D R V AI
Sbjct: 481 TYDPSL---------------------------SSAWIQWTQVESAVEDFER---VRAIF 510
Query: 241 RGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE 300
+++ D +W + D+ G ERAR++YE ++ + V+ V+ +YA E
Sbjct: 511 ELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLERTSHVK----VWISYALMEI 566
Query: 301 LSLNKRMEEIAENDTPSEEDDIEL 324
+L +E N+ E D +L
Sbjct: 567 ATLGGGEDEDG-NEIEGEAGDADL 589
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 141/618 (22%), Positives = 240/618 (38%), Gaps = 104/618 (16%)
Query: 88 YEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPL 147
YE + FER+L + +W+ Y + I R++FDRA+ LP +W
Sbjct: 91 YERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDA--LWYK 148
Query: 148 YLSFVKSHAVPETAVRVFRRYLKLFPEDA--EDYIEYLSSIERLDEAAVKLAYIVNKESF 205
Y+ + A ++F R+++ P D + YI+ LD A+ + +
Sbjct: 149 YVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRASA-----IYERWI 203
Query: 206 VSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAI-IRGGLRRYTDQLGHLWNSLADYYIR 264
+ N W + E Q PDK R + A+ G ++ ++ + A R
Sbjct: 204 ACRPIPKNWVTWAKFEEDRGQ-PDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETR 262
Query: 265 SGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE---------ELS-LNKRM----EEI 310
FERAR IY+ A+ + + ++ Y +FE EL+ L KR EE+
Sbjct: 263 LKEFERARVIYKFALARLPRSKS-ASLYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEEL 321
Query: 311 AENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLD 370
A + T + + LARLE+ R R++ +V +P+
Sbjct: 322 AYDPT-----NYDAWFSLARLEEDAYR--------ADREDGEDV------------EPMR 356
Query: 371 IIRTYTEAVKTVDPKLAV---GKLHTLWIEFGKFYEVNDQLED-ARLIFDKAT-LVPYTK 425
+ Y AV V P L + LW+++ F E++ + D AR ++ A LVP+ K
Sbjct: 357 VREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPH-K 415
Query: 426 VEDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWS 485
A +W +A E+R AA +++ +P + E ++ R+ + ++ +
Sbjct: 416 TFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIE-LEMRLREFDRVRT 474
Query: 486 LYADLEESFGTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEA 545
LY E F T+ P + W + T+ S ER R +FE ++
Sbjct: 475 LY----EKFLTYD-----------PSLSSAWIQW-TQVES--AVEDFERVRAIFELAVQQ 516
Query: 546 CPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIP 605
+ ++ Y E G A +YER E ++I A
Sbjct: 517 SLD-MPEIVWKAYIDFEAGEGERERARNLYERLL------ERTSHVKVWISYA------- 562
Query: 606 KTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAI----YAHCSQICDPRVTAG 661
+ E A E+ E+E + G+ D AR + Y + A
Sbjct: 563 ----LMEIATLGGGEDEDGN------EIEGEAGDADLARQVFERGYKDLRAKGEKEDRAV 612
Query: 662 FWAAWKSFEITHGNEDTM 679
+WKSFE HG+E+T+
Sbjct: 613 LLESWKSFEQEHGDEETL 630
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 28/225 (12%)
Query: 479 KSIKLWSLYADLEESFGTFK----AYEKGIALFKWPYIFDIWN--TYLTKFLSRYGGTKL 532
+S+ LW Y D+E +++ I L P + +W YL + L G
Sbjct: 107 RSVDLWIKYTDMELKARNINHARNLFDRAITLL--PRVDALWYKYVYLEELLLNVSG--- 161
Query: 533 ERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGA-VLPEEMFEMF 591
AR +FE+ ++ P A + Y KLEE + A A+YER +P+
Sbjct: 162 --ARQIFERWMQWEPNDKA---WQSYIKLEERYNELDRASAIYERWIACRPIPKNW---- 212
Query: 592 NIYIKKAAEIYGIP-KTRQIYERAIESLPEE-----PTRQMCLKFAEMETKLGEIDRARA 645
+ K E G P K R++++ A+E +E + + FA MET+L E +RAR
Sbjct: 213 -VTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETRLKEFERARV 271
Query: 646 IYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQ 690
IY +A +A + FE HG+ + + KR +Q
Sbjct: 272 IYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKRRIQ 316
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 126/324 (38%), Gaps = 66/324 (20%)
Query: 18 LPYEEEILRNPFSVKHWLRYIEHKKNAPKAI-----------INTIYERSLKELPGSY-- 64
+ YEEE+ +P + W +++A +A + +YER++ +P +
Sbjct: 315 IQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEK 374
Query: 65 KLWYNYLKLRRKQVKGKVITDPSYEDVNNTFERSLVFM-HK---MPRIWLDYGRFLMDQH 120
+ W Y+ L + + I Y+ + ++ ++ + HK ++WL Y F + +
Sbjct: 375 RYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRL 434
Query: 121 KITQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYI 180
++ R V + P + L+ +++ E +R F R L+ E ++
Sbjct: 435 DVSAARKVLGAGIGMCPKPK------LFTGYIEL----EMRLREFDRVRTLY----EKFL 480
Query: 181 EYLSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAII 240
Y S+ W + ++ S D R V AI
Sbjct: 481 TYDPSL---------------------------SSAWIQWTQVESAVEDFER---VRAIF 510
Query: 241 RGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE 300
+++ D +W + D+ G ERAR++YE ++ + V+ V+ +YA E
Sbjct: 511 ELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLERTSHVK----VWISYALMEI 566
Query: 301 LSLNKRMEEIAENDTPSEEDDIEL 324
+L +E N+ E D +L
Sbjct: 567 ATLGGGEDEDG-NEIEGEAGDADL 589
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 534 RARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNI 593
RAR +FE+ L+ P L++ Y + E ++ HA + +RA LP + ++
Sbjct: 90 RARSVFERALDVHPNN--TQLWIRYVQAEIKNRNINHARNLLDRAV-TRLPR-VTSLWYQ 145
Query: 594 YIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQI 653
Y+ + IP TRQ+++R ++ P+E Q + +E + GE DRAR I+ + +
Sbjct: 146 YLYVMEMLGDIPGTRQVFDRWMKWQPDE---QAWSAYIRLEKRYGEFDRAREIFRAFTAV 202
Query: 654 -CDPRVTAGFWAAWKSFEITHGNEDTMREMLR 684
+PR W W FE +G DT+RE+ +
Sbjct: 203 HPEPRT----WLKWAKFEEEYGTSDTVREVFQ 230
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 180/451 (39%), Gaps = 88/451 (19%)
Query: 20 YEEEILRNPFSVKHWLRYIEHKKNAPK-AIINTIYERSLKELPGSYKLWYNYLKLRRKQV 78
+E+ + RN + +WL+Y + + + A +++ER+L P + +LW Y++ ++
Sbjct: 61 FEDYVRRNRVRLSNWLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQA---EI 117
Query: 79 KGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPI 138
K + I N +R++ + ++ +W Y + I TR VFDR ++ P
Sbjct: 118 KNRNINH-----ARNLLDRAVTRLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQPD 172
Query: 139 TQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKLAY 198
Q W Y+ K + + A +FR + + PE +K A
Sbjct: 173 EQ---AWSAYIRLEKRYGEFDRAREIFRAFTAVHPE---------------PRTWLKWA- 213
Query: 199 IVNKESFVSKHGKSN--HQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWN 256
F ++G S+ +++ + I++ +L DA+ D+ ++
Sbjct: 214 -----KFEEEYGTSDTVREVFQTAIQTIAE------TLGDDAV---------DE--RIFI 251
Query: 257 SLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTP 316
+ A Y R +ERAR IY+ + + + T + Y FE+ D
Sbjct: 252 AFARYEARLREYERARAIYKFGLDNLPRSKSMT-LHAHYTTFEKQF----------GDKE 300
Query: 317 SEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFD-GKPLDIIR-T 374
ED I L +RR L V ++N N W RL + G +D R
Sbjct: 301 GVEDVI-----------LTKRRRLYEEQV--KENAKNYDVWFDFARLEESGGDVDRTREV 347
Query: 375 YTEAVKTVDPKLAVGKLH-TLWIEFGKFYEVNDQLED-----ARLIFDKA-TLVPYTKVE 427
Y A+ V P K H +I FY + ++ E AR I+D L+P+ K
Sbjct: 348 YERAIAQVPP--TQEKRHWRRYIFLFLFYAIWEERETKDIGRARQIYDTCLNLIPHKKF- 404
Query: 428 DLATVWCEWAELELRAGQEEAALRLMARATA 458
A VW A E+R GQ A + + RA
Sbjct: 405 TFAKVWVAKAHFEIRQGQLTTARKTLGRAIG 435
>sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2
SV=1
Length = 690
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 533 ERARDLFEQCLEACPPR---YAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPE-EMF 588
ER R +++ LE P + +AK ++L YA+ E + + + RA G + +
Sbjct: 391 ERTRQVYQASLELIPHKKFTFAK-MWLYYAQFE----IRQKNLPFARRALGTSIGKCPKN 445
Query: 589 EMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYA 648
++F YI+ ++ + R++YE+ +E PE T +KFAE+ET LG+I+RARAIY
Sbjct: 446 KLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT--SWIKFAELETILGDIERARAIYE 503
Query: 649 HCSQICDPRVTAG--FWAAWKSFEITHGNEDTMREMLR 684
I PR+ W ++ FEI + R + R
Sbjct: 504 LA--ISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYR 539
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 139/699 (19%), Positives = 263/699 (37%), Gaps = 166/699 (23%)
Query: 20 YEEEILRNPFSVKHWLRYIEHKKNAPK-AIINTIYERSLKELPGSYKLWYNY--LKLRRK 76
+E+ I +N + +W++Y + +++ + +IYER+L + LW Y ++++ +
Sbjct: 70 FEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNR 129
Query: 77 QVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRAL 136
QV N ++R++ + ++ + W Y + R VF+R +
Sbjct: 130 QVNH----------ARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQ 179
Query: 137 PITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKL 196
P Q W Y++F + E A ++ R++ + P +++I+Y
Sbjct: 180 PEEQ---AWHSYINFELRYKEVERARTIYERFVLVHPA-VKNWIKYA------------- 222
Query: 197 AYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWN 256
F KH H R + A+ G + D+ HL+
Sbjct: 223 -------RFEEKHAYFAH----------------ARKVYERAVEFFG-DEHMDE--HLYV 256
Query: 257 SLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTP 316
+ A + FER R IY+ A+ ++ ++ ++F Y FE+ ++R
Sbjct: 257 AFAKFEENQKEFERVRVIYKYALDRISK-QEAQELFKNYTIFEKKFGDRRG--------- 306
Query: 317 SEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKP-LDIIR-T 374
+ED++ + ++ NPHN W +RL + D +R
Sbjct: 307 --------------IEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREV 352
Query: 375 YTEAVKTVDP---KLAVGKLHTLWIEFGKFYEVNDQ-LEDARLIFDKA-TLVPYTKVEDL 429
Y A+ V P K + LW+ + + E+ + E R ++ + L+P+ K
Sbjct: 353 YERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKF-TF 411
Query: 430 ATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYAD 489
A +W +A+ E+R A R + + + KL+ Y +
Sbjct: 412 AKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKN------------------KLFKGYIE 453
Query: 490 LEESFGTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPR 549
LE F +R R L+E+ LE P
Sbjct: 454 LELQLREF-----------------------------------DRCRKLYEKFLEFGPEN 478
Query: 550 YAKTLYLLYAKLEEEHGLARHAMAVYERATGAV---LPEEMFEMFNIYIKKAAEIYGIPK 606
T ++ +A+LE G A A+YE A +PE +++ YI E +
Sbjct: 479 C--TSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKS---YIDFEIEQEETER 533
Query: 607 TRQIYERAIESLPEEPTRQMCLKFAEME---TKLGEIDRARAIYAHCSQI---CDPRVTA 660
TR +Y + ++ ++ + FA+ E K G + + R IY ++ C+ +
Sbjct: 534 TRNLYRQLLQRTQH---VKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEKEER 590
Query: 661 -GFWAAWKSFEITHGN-------EDTMREMLRIKRSVQA 691
+W+SFE G + M E ++ +R VQA
Sbjct: 591 LMLLESWRSFEDEFGTVSDKERVDKLMPEKVKKRRKVQA 629
>sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=2 SV=1
Length = 690
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 533 ERARDLFEQCLEACPPR---YAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPE-EMF 588
ER R +++ LE P + +AK ++L YA+ E + + + RA G + +
Sbjct: 391 ERTRQVYQASLELIPHKKFTFAK-MWLYYAQFE----IRQKNLPFARRALGTSIGKCPKN 445
Query: 589 EMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYA 648
++F YI+ ++ + R++YE+ +E PE T +KFAE+ET LG+I+RARAIY
Sbjct: 446 KLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT--SWIKFAELETILGDIERARAIYE 503
Query: 649 HCSQICDPRVTAG--FWAAWKSFEITHGNEDTMREMLR 684
I PR+ W ++ FEI + R + R
Sbjct: 504 LA--ISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYR 539
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 139/699 (19%), Positives = 263/699 (37%), Gaps = 166/699 (23%)
Query: 20 YEEEILRNPFSVKHWLRYIEHKKNAPK-AIINTIYERSLKELPGSYKLWYNY--LKLRRK 76
+E+ I +N + +W++Y + +++ + +IYER+L + LW Y ++++ +
Sbjct: 70 FEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNR 129
Query: 77 QVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRAL 136
QV N ++R++ + ++ + W Y + R VF+R +
Sbjct: 130 QVNH----------ARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQ 179
Query: 137 PITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKL 196
P Q W Y++F + E A ++ R++ + P +++I+Y
Sbjct: 180 PEEQ---AWHSYINFELRYKEVERARTIYERFVLVHPA-VKNWIKYA------------- 222
Query: 197 AYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWN 256
F KH H R + A+ G + D+ HL+
Sbjct: 223 -------RFEEKHAYFAH----------------ARKVYERAVEFFG-DEHMDE--HLYV 256
Query: 257 SLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTP 316
+ A + FER R IY+ A+ ++ ++ ++F Y FE+ ++R
Sbjct: 257 AFAKFEENQKEFERVRVIYKYALDRISK-QEAQELFKNYTIFEKKFGDRRG--------- 306
Query: 317 SEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKP-LDIIR-T 374
+ED++ + ++ NPHN W +RL + D +R
Sbjct: 307 --------------IEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREV 352
Query: 375 YTEAVKTVDP---KLAVGKLHTLWIEFGKFYEVNDQ-LEDARLIFDKA-TLVPYTKVEDL 429
Y A+ V P K + LW+ + + E+ + E R ++ + L+P+ K
Sbjct: 353 YERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKF-TF 411
Query: 430 ATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYAD 489
A +W +A+ E+R A R + + + KL+ Y +
Sbjct: 412 AKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKN------------------KLFKGYIE 453
Query: 490 LEESFGTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPR 549
LE F +R R L+E+ LE P
Sbjct: 454 LELQLREF-----------------------------------DRCRKLYEKFLEFGPEN 478
Query: 550 YAKTLYLLYAKLEEEHGLARHAMAVYERATGAV---LPEEMFEMFNIYIKKAAEIYGIPK 606
T ++ +A+LE G A A+YE A +PE +++ YI E +
Sbjct: 479 C--TSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKS---YIDFEIEQEETER 533
Query: 607 TRQIYERAIESLPEEPTRQMCLKFAEME---TKLGEIDRARAIYAHCSQI---CDPRVTA 660
TR +Y + ++ ++ + FA+ E K G + + R IY ++ C+ +
Sbjct: 534 TRNLYRQLLQRTQH---VKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEKEER 590
Query: 661 -GFWAAWKSFEITHGN-------EDTMREMLRIKRSVQA 691
+W+SFE G + M E ++ +R VQA
Sbjct: 591 LMLLESWRSFEDEFGTVSDKERVDKLMPEKVKKRRKVQA 629
>sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1
Length = 691
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 128/575 (22%), Positives = 220/575 (38%), Gaps = 118/575 (20%)
Query: 20 YEEEILRNPFSVKHWLRYIEHK-KNAPKAIINTIYERSLKELPGSYKLWYNYLKLRRKQV 78
+E R+ F++K+WL+Y + + + A +++ER+L LW Y++ ++
Sbjct: 61 FESYCQRSGFNLKNWLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVEA---EL 117
Query: 79 KGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPI 138
K + I N +R++ + ++ ++W Y I R VF+R + P
Sbjct: 118 KSRNIN-----FARNLLDRAVTHLPRVDKLWYKYVWVEEMLGNIPGVRQVFERWMEWQP- 171
Query: 139 TQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKLAY 198
W ++ + + + A +F R+ + PE ++I++
Sbjct: 172 --DEAAWSAFIKLEQRYGEYDRAREIFTRFTMVHPE-PRNWIKW---------------- 212
Query: 199 IVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQL--GHLWN 256
F ++G S D++R + AI L +Y D+ L+
Sbjct: 213 ----SKFEEEYGTS----------------DRVREVFERAI--EELSKYGDEFVEERLFI 250
Query: 257 SLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTP 316
+ A Y + +RAR IY+ ++ + + + Y FE+ ++ E
Sbjct: 251 AYARYEAKLHDLDRARAIYKFGLENLPRSKAML-LHKEYTTFEKQYGDREGVE------- 302
Query: 317 SEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKPLDIIRT-- 374
D+ L R ED L+R+NP N W RL + DI RT
Sbjct: 303 ----DVVLSKRRRHYED------------LVRENPKNYDVWFDYARLEEASG-DIDRTRE 345
Query: 375 -YTEAVKTVDPKLAVGKLH-----TLWIEFGKFYEVN-DQLEDARLIFDKA-TLVPYTKV 426
Y +A+ V P A K H LWI F + E E AR ++D L+P+ +
Sbjct: 346 VYEKAIAQVPPTQA--KRHWRRYIYLWIFFALWEETEAKNPERARQVYDTCLKLIPH-RT 402
Query: 427 EDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSL 486
A VW A E+R G AA + + RA + +L+
Sbjct: 403 FTFAKVWMHKAHFEIRQGDLAAARKTLGRAIGMCPKD------------------RLFKG 444
Query: 487 YADLEES---FGTFKA-YEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQC 542
Y ++E+ FG + YEK IA P W + L R G L+RAR + +
Sbjct: 445 YIEMEQKLYEFGRCRILYEKHIAYN--PANCSTWVKWAE--LER-GLDDLDRARAILDMG 499
Query: 543 LEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYER 577
+ + ++ Y EEE G ++YER
Sbjct: 500 IAQPVLDMPEVVWKSYIDFEEEEGEYDKTRSLYER 534
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 38/253 (15%)
Query: 395 WIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMA 454
W+++ ++ + +R +F++A + KV T+W + E EL++ A L+
Sbjct: 75 WLQYAQWELEQKEYARSRSVFERALNLHANKV----TLWIRYVEAELKSRNINFARNLLD 130
Query: 455 RATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGTFKAYEKGIALF-KWPYIF 513
RA R KLW Y +EE G + + +W
Sbjct: 131 RAVTHLPR-----------------VDKLWYKYVWVEEMLGNIPGVRQVFERWMEWQPDE 173
Query: 514 DIWNTYLTKFLSRYGGTKLERARDLFEQCLEACP-PRYAKTLYLLYAKLEEEHGLARHAM 572
W+ ++ K RYG + +RAR++F + P PR ++ ++K EEE+G +
Sbjct: 174 AAWSAFI-KLEQRYG--EYDRAREIFTRFTMVHPEPRN----WIKWSKFEEEYGTSDRVR 226
Query: 573 AVYERAT------GAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQM 626
V+ERA G EE +F Y + A+++ + + R IY+ +E+LP +
Sbjct: 227 EVFERAIEELSKYGDEFVEE--RLFIAYARYEAKLHDLDRARAIYKFGLENLPRSKAMLL 284
Query: 627 CLKFAEMETKLGE 639
++ E + G+
Sbjct: 285 HKEYTTFEKQYGD 297
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 135/616 (21%), Positives = 233/616 (37%), Gaps = 100/616 (16%)
Query: 88 YEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPL 147
YE + FER+L + +W+ Y + I R++FDRA+ LP +W
Sbjct: 91 YERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDA--LWYK 148
Query: 148 YLSFVKSHAVPETAVRVFRRYLKLFPEDA--EDYIEYLSSIERLDEAAVKLAYIVNKESF 205
Y+ + A ++F R+++ P D + YI+ LD A+ + +
Sbjct: 149 YVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRASA-----IYERWI 203
Query: 206 VSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAI-IRGGLRRYTDQLGHLWNSLADYYIR 264
+ N W + E Q PDK R + A+ G ++ ++ + A R
Sbjct: 204 ACRPIPKNWVAWAKFEEDRGQ-PDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETR 262
Query: 265 SGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTPSEEDDIEL 324
FERAR IY+ A+ + + ++ Y +FE+ ++ +EL
Sbjct: 263 LKEFERARVIYKFALARLPRSKS-ASLYAQYTKFEKQHGDRA--------------GVEL 307
Query: 325 ELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRL------------FDGKPLDII 372
+ L +RR+ L +P N W RL D +P+ +
Sbjct: 308 TV-------LGKRRIQYEEE--LAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVR 358
Query: 373 RTYTEAVKTVDPKLAV---GKLHTLWIEFGKFYEVNDQLED-ARLIFDKAT-LVPYTKVE 427
Y AV V P L + LW+++ F E++ + D AR ++ A LVP+ K
Sbjct: 359 EVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPH-KTF 417
Query: 428 DLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLY 487
A +W +A E+R AA +++ +P + E ++ R+ + ++ +LY
Sbjct: 418 TFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIE-LEMRLREFDRVRTLY 476
Query: 488 ADLEESFGTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACP 547
E F T+ P + W + T+ S ER R +FE ++
Sbjct: 477 ----EKFLTYD-----------PSLSSAWIQW-TQVES--AVEDFERVRAIFELAVQQSL 518
Query: 548 PRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKT 607
+ ++ Y E G A +YER E ++I A
Sbjct: 519 D-MPEIVWKAYIDFEAGEGERERARNLYERLL------ERTSHVKVWISYA--------- 562
Query: 608 RQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAI----YAHCSQICDPRVTAGFW 663
+ E A E+ E+E + G+ D AR + Y + A
Sbjct: 563 --LMEIATLGGGEDEDGN------EIEGEAGDADLARKVFERGYKDLRAKGEKEDRAVLL 614
Query: 664 AAWKSFEITHGNEDTM 679
+WKSFE HG+E+ +
Sbjct: 615 ESWKSFEQEHGDEEML 630
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 28/225 (12%)
Query: 479 KSIKLWSLYADLEESFGTFK----AYEKGIALFKWPYIFDIWN--TYLTKFLSRYGGTKL 532
+S+ LW Y D+E +++ I L P + +W YL + L G
Sbjct: 107 RSVDLWIKYTDMELKARNINHARNLFDRAITLL--PRVDALWYKYVYLEELLLNVSG--- 161
Query: 533 ERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGA-VLPEEMFEMF 591
AR +FE+ ++ P A + Y KLEE + A A+YER +P+
Sbjct: 162 --ARQIFERWMQWEPNDKA---WQSYIKLEERYNELDRASAIYERWIACRPIPKNW---- 212
Query: 592 NIYIKKAAEIYGIP-KTRQIYERAIESLPEE-----PTRQMCLKFAEMETKLGEIDRARA 645
+ K E G P K R++++ A+E +E + + FA MET+L E +RAR
Sbjct: 213 -VAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETRLKEFERARV 271
Query: 646 IYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRSVQ 690
IY +A +A + FE HG+ + + KR +Q
Sbjct: 272 IYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKRRIQ 316
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 126/324 (38%), Gaps = 66/324 (20%)
Query: 18 LPYEEEILRNPFSVKHWLRYIEHKKNAPKAI-----------INTIYERSLKELPGSY-- 64
+ YEEE+ +P + W +++A +A + +YER++ +P +
Sbjct: 315 IQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEK 374
Query: 65 KLWYNYLKLRRKQVKGKVITDPSYEDVNNTFERSLVFM-HK---MPRIWLDYGRFLMDQH 120
+ W Y+ L + + I Y+ + ++ ++ + HK ++WL Y F + +
Sbjct: 375 RYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRL 434
Query: 121 KITQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYI 180
++ R V + P + L+ +++ E +R F R L+ E ++
Sbjct: 435 DVSAARKVLGAGIGMCPKPK------LFTGYIEL----EMRLREFDRVRTLY----EKFL 480
Query: 181 EYLSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAII 240
Y S+ W + ++ S D R V AI
Sbjct: 481 TYDPSL---------------------------SSAWIQWTQVESAVEDFER---VRAIF 510
Query: 241 RGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE 300
+++ D +W + D+ G ERAR++YE ++ + V+ V+ +YA E
Sbjct: 511 ELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLERTSHVK----VWISYALMEI 566
Query: 301 LSLNKRMEEIAENDTPSEEDDIEL 324
+L +E N+ E D +L
Sbjct: 567 ATLGGGEDEDG-NEIEGEAGDADL 589
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 125/577 (21%), Positives = 222/577 (38%), Gaps = 125/577 (21%)
Query: 20 YEEEILRNPFSVKHWLRYIE---HKKNAPKAIINTIYERSLKELPGSYKLWYNYLKLRRK 76
+E+ + RN ++ +W+RY +K +A +I+ER+L P S LW Y++
Sbjct: 61 FEDYVRRNRLNMNNWMRYASWELEQKEFRRA--RSIFERALDVNPTSVVLWIRYIE---S 115
Query: 77 QVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRAL 136
+++ + I N +R++ + ++ + W Y I TR VF+R +
Sbjct: 116 EMRNRNIN-----HARNLLDRAVTILPRVDKFWYKYVYMEETLGNIQGTRQVFERWMSWE 170
Query: 137 PITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKL 196
P W Y+ K + E A +F+R+ + PE ++I++
Sbjct: 171 P---DEGAWSAYIKLEKRYNEFERARAIFQRFTIVHPE-PRNWIKWA------------- 213
Query: 197 AYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHLWN 256
F ++G S+ L E+ M I +L D + D+ L+
Sbjct: 214 -------RFEEEYGTSD--LVREVYGMA------IETLGED---------FMDE--KLFI 247
Query: 257 SLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAENDTP 316
+ A + + +ERAR IY+ A+ + + + AY FE+ ++ E
Sbjct: 248 AYAKFEAKLKEYERARAIYKYALDRLPRSKAMA-LHKAYTTFEKQFGDREGVE------- 299
Query: 317 SEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFD--GKPLDIIRT 374
D+ L R + E+ L++NP N W RL + G P +
Sbjct: 300 ----DVILSKRRVQYEE------------QLKENPRNYDVWFDFARLEETSGDPDRVRDI 343
Query: 375 YTEAVKTVDP---KLAVGKLHTLWIEFGKFYEVNDQ-LEDARLIFDKA-TLVPYTKVEDL 429
Y A+ + P K + LWI + + E+ + ++ AR I+ + L+P+ K
Sbjct: 344 YERAIAQIPPSQEKRHWRRYIYLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKF-TF 402
Query: 430 ATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYAD 489
A +W A+ ++R +AA + + +A + KL+ Y D
Sbjct: 403 AKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPKD------------------KLFRGYID 444
Query: 490 LEESFGTF----KAYEKGIALFKWPYIFDIWNTYLTKFLSRY-----GGTKLERARDLFE 540
LE F YEK I WN ++ +Y G ERAR +FE
Sbjct: 445 LERQLFEFVRCRTLYEKQIE----------WNPANSQSWIKYAELERGLDDSERARAIFE 494
Query: 541 QCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYER 577
++ + ++ Y EE G +YER
Sbjct: 495 LGIDQPMLDMPELVWKAYIDFEEYEGEYDRVRQLYER 531
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 73/302 (24%)
Query: 395 WIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMA 454
W+ + + + AR IF++A V T V +W + E E+R A L+
Sbjct: 75 WMRYASWELEQKEFRRARSIFERALDVNPTSV----VLWIRYIESEMRNRNINHARNLLD 130
Query: 455 RATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFG----TFKAYEKGIALFKWP 510
RA T+ RV K W Y +EE+ G T + +E+ ++ W
Sbjct: 131 RAV--------------TILPRV---DKFWYKYVYMEETLGNIQGTRQVFERWMS---WE 170
Query: 511 YIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACP-PRYAKTLYLLYAKLEEEHGLAR 569
W+ Y+ K RY + ERAR +F++ P PR ++ +A+ EEE+G +
Sbjct: 171 PDEGAWSAYI-KLEKRYN--EFERARAIFQRFTIVHPEPRN----WIKWARFEEEYGTS- 222
Query: 570 HAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEE-PTRQMCL 628
R++Y AIE+L E+ ++ +
Sbjct: 223 -----------------------------------DLVREVYGMAIETLGEDFMDEKLFI 247
Query: 629 KFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRS 688
+A+ E KL E +RARAIY + A+ +FE G+ + + +++ KR
Sbjct: 248 AYAKFEAKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKRR 307
Query: 689 VQ 690
VQ
Sbjct: 308 VQ 309
Score = 39.3 bits (90), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 113/262 (43%), Gaps = 37/262 (14%)
Query: 53 YERSLKELPGSYKLWYNYLKLRRKQVKGKVITDPSYEDVNNTFERSLVFM---------H 103
YE LKE P +Y +W+++ +L ++ G DP + V + +ER++ +
Sbjct: 310 YEEQLKENPRNYDVWFDFARL--EETSG----DP--DRVRDIYERAIAQIPPSQEKRHWR 361
Query: 104 KMPRIWLDYGRF-LMDQHKITQTRHVFDRALRALPITQ--HHRVWPLYLSFVKSHAVPET 160
+ +W+ Y + M+ + + R ++ L+ +P + ++W L F +
Sbjct: 362 RYIYLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQA 421
Query: 161 AVRVFRRYLKLFPEDA--EDYIEYLSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWN 218
A + + + + P+D YI+ +ER V+ + K+ + +N Q W
Sbjct: 422 ARKTLGQAIGMCPKDKLFRGYID----LERQLFEFVRCRTLYEKQ---IEWNPANSQSWI 474
Query: 219 ELCEMISQNPDKIRSLNVDAIIRGGLRR-YTDQLGHLWNSLADYYIRSGLFERARDIYEE 277
+ E+ D R+ AI G+ + D +W + D+ G ++R R +YE
Sbjct: 475 KYAELERGLDDSERAR---AIFELGIDQPMLDMPELVWKAYIDFEEYEGEYDRVRQLYER 531
Query: 278 AIQTVTTVRDFTQVFDAYAQFE 299
+Q D +V+ YA+FE
Sbjct: 532 LLQKT----DHVKVWINYARFE 549
>sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1
PE=3 SV=2
Length = 673
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 73/302 (24%)
Query: 395 WIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLMA 454
W+ + + + AR IF++A V T V +W + E E+R A L+
Sbjct: 75 WMRYAAWELEQKEFRRARSIFERALDVDSTSV----PLWIRYIESEMRNRNINHARNLLD 130
Query: 455 RATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFG----TFKAYEKGIALFKWP 510
RA T+ RV KLW Y +EE+ G T + +E+ ++ W
Sbjct: 131 RAV--------------TILPRV---DKLWYKYVYMEETLGNIPGTRQVFERWMS---WE 170
Query: 511 YIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACP-PRYAKTLYLLYAKLEEEHGLAR 569
W+ Y+ K RY + ERAR +F++ P PR ++ +A+ EEE+G +
Sbjct: 171 PDEGAWSAYI-KLEKRYN--EFERARAIFQRFTIVHPEPRN----WIKWARFEEEYGTS- 222
Query: 570 HAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEE-PTRQMCL 628
E+YG+ A+E+L E+ ++ +
Sbjct: 223 --------------------------DLVREVYGL---------AVETLGEDFMDEKLFI 247
Query: 629 KFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRS 688
+A ETKL E +RARAIY + + A+ +FE G+ + + ++ KR
Sbjct: 248 AYARFETKLKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAKRR 307
Query: 689 VQ 690
VQ
Sbjct: 308 VQ 309
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 139/681 (20%), Positives = 258/681 (37%), Gaps = 148/681 (21%)
Query: 20 YEEEILRNPFSVKHWLRYIE---HKKNAPKAIINTIYERSLKELPGSYKLWYNYLKLRRK 76
+E+ + RN ++ +W+RY +K +A +I+ER+L S LW Y++
Sbjct: 61 FEDYVRRNRINMNNWMRYAAWELEQKEFRRA--RSIFERALDVDSTSVPLWIRYIE---S 115
Query: 77 QVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRAL 136
+++ + I N +R++ + ++ ++W Y I TR VF+R +
Sbjct: 116 EMRNRNIN-----HARNLLDRAVTILPRVDKLWYKYVYMEETLGNIPGTRQVFERWMSWE 170
Query: 137 PITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAVKL 196
P W Y+ K + E A +F+R+ + PE ++I++
Sbjct: 171 P---DEGAWSAYIKLEKRYNEFERARAIFQRFTIVHPE-PRNWIKWA------------- 213
Query: 197 AYIVNKESFVSKHGKSN--HQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHL 254
F ++G S+ +++ E + ++ + D+ L
Sbjct: 214 -------RFEEEYGTSDLVREVYGLAVETLGED-------------------FMDE--KL 245
Query: 255 WNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLNKRMEEIAEND 314
+ + A + + +ERAR IY+ A+ + + T + AY FE+ ++ E EN
Sbjct: 246 FIAYARFETKLKEYERARAIYKYALDRLPRSKSIT-LHKAYTTFEKQFGDR---EGVEN- 300
Query: 315 TPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFD--GKPLDII 372
+ L R + E+ L++N N W RL + G P +
Sbjct: 301 -------VILAKRRVQYEE------------QLKENLRNYDVWFDFARLEEQSGDPERVR 341
Query: 373 RTYTEAVKTVDP---KLAVGKLHTLWIEFGKFYEVNDQ-LEDARLIFDKA-TLVPYTKVE 427
Y A+ + P K + LWI + + E+ + ++ AR ++ + L+P+ K
Sbjct: 342 DVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKF- 400
Query: 428 DLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLY 487
A VW A+ E+R +AA + + +A + KL+ Y
Sbjct: 401 TFAKVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKD------------------KLFRGY 442
Query: 488 ADLEESFGTF----KAYEKGIALFKW-PYIFDIWNTYLTKFLSRYGGTKLERARDLFEQC 542
DLE F YEK I +W P W Y L R G ERAR ++E
Sbjct: 443 IDLERQLFEFVRCRTLYEKQI---EWNPSNSQSWIQYAE--LER-GLDDTERARAIYELG 496
Query: 543 LEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIY 602
++ + ++ Y E++ G +YER + ++I A
Sbjct: 497 IDQPTLDMPELVWKAYIDFEDDEGEYERERQLYERLLQKT------DHVKVWINYARFEI 550
Query: 603 GIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPR----V 658
+P + E + +E R RARA++ ++ +
Sbjct: 551 NVPDEEEEEEEEERPISDEAKR-----------------RARAVFERAHRVFKEKELKEE 593
Query: 659 TAGFWAAWKSFEITHGNEDTM 679
AW++FE THG+ + +
Sbjct: 594 RVELLNAWRAFEHTHGSPEDI 614
>sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas
reinhardtii GN=MBB1 PE=2 SV=1
Length = 662
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 30/336 (8%)
Query: 366 GKPLDIIRTYTEAVKTVDPKLA-VGKLHT-LWIEFGKFYEVNDQLEDARLIFDKATLVPY 423
GK L + Y EA + A G ++ +W +G +E AR ++D A +V
Sbjct: 168 GKTLVQQKRYDEARQLYQDGCANTGNVNPYIWSAWGWLEARTGNVERARKLYDAAVVVDG 227
Query: 424 TKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKL 483
T A W +W LE G A L + R + ++ A +Y ++
Sbjct: 228 TH----ACAWHKWGMLEKGQGNFTRARDLWMQGIQRCRR------KPQSQNAYLYNALGC 277
Query: 484 WSLYADLEESFGTFKAYEKGIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCL 543
+ A L +E+G + +W + ++ G + R LF + L
Sbjct: 278 --MAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWAV-LEAKQGDPTV--VRYLFRKAL 332
Query: 544 EACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEE--MFEMFNIYIKKAAEI 601
A P ++ ++L +A E G +H +A+ R + P + +++ + + K+A I
Sbjct: 333 GANP--RSRYVHLAWALWERRQGNPQHCLALLRRGC-ELNPTDPALYQAWALVEKQAGRI 389
Query: 602 YGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAG 661
+ R+++E+ + + P + M + ME + G +DRAR ++ DPR +
Sbjct: 390 E---RARELFEQGLRADPSD--LYMWQAYGVMEAEQGNMDRARQLFQE-GVWADPRSPST 443
Query: 662 FWA--AWKSFEITHGNEDTMREMLRIKRSVQAQYNT 695
+ AW + E GN T RE+ + V + T
Sbjct: 444 VYVFHAWGALEWQAGNVQTARELFKAAVRVDPKSET 479
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 531 KLERARDLFEQCLEACPPRYAKTLYL--LYAKLEEEHGLARHAMAVYERATGA--VLPEE 586
++ERAR+LFEQ L A P LY+ Y +E E G A +++ A P
Sbjct: 388 RIERARELFEQGLRADP----SDLYMWQAYGVMEAEQGNMDRARQLFQEGVWADPRSPST 443
Query: 587 MFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDR 642
++ +F+ + + + R++++ A+ P+ T + ME++LGEI+R
Sbjct: 444 VY-VFHAWGALEWQAGNVQTARELFKAAVRVDPKSET--TWASWIAMESELGEIER 496
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 127/302 (42%), Gaps = 65/302 (21%)
Query: 393 TLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRL 452
+ WI++ + +++ R I+++A V + +W + E EL+ + A L
Sbjct: 71 STWIKYASWEASQGEMDRCRSIYERALDVEPHHL----PLWLRYTEQELKMRNVQHARNL 126
Query: 453 MARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFG----TFKAYEKGIALFK 508
+D A ++ R+ +LW Y LEE G T + +E+ + K
Sbjct: 127 --------------YDRAVSILPRI---DQLWYKYVHLEELLGNIPGTRQVFERWM---K 166
Query: 509 WPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLA 568
W W+ Y+ RY +L+RA ++E+C+ C P ++ +AK EE+ G
Sbjct: 167 WEPEEKAWHAYIN-LEVRY--DELDRASAIWERCV-TCHP--VPKQWIRWAKFEEDRGNL 220
Query: 569 RHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCL 628
A V++ A + +E ++KA ++
Sbjct: 221 EKARIVFQMALDYIGEDE------DAMEKAQSVF-------------------------T 249
Query: 629 KFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKRS 688
FA+MET+L E +RAR IY + + + G ++++ FE G +++ + + KR
Sbjct: 250 AFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDTVIGKRR 309
Query: 689 VQ 690
+Q
Sbjct: 310 IQ 311
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 146/707 (20%), Positives = 264/707 (37%), Gaps = 143/707 (20%)
Query: 20 YEEEILRNPFSVKHWLRYIEHKKNAPKAI-INTIYERSLKELPGSYKLWYNY----LKLR 74
+E+ + RN ++ W++Y + + + +IYER+L P LW Y LK+R
Sbjct: 59 FEDRLRRNGLNMSTWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMR 118
Query: 75 RKQVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALR 134
Q N ++R++ + ++ ++W Y I TR VF+R ++
Sbjct: 119 NVQ------------HARNLYDRAVSILPRIDQLWYKYVHLEELLGNIPGTRQVFERWMK 166
Query: 135 ALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERLDEAAV 194
P + W Y++ + + A ++ R + P + +I + E D +
Sbjct: 167 WEP---EEKAWHAYINLEVRYDELDRASAIWERCVTCHPVPKQ-WIRWAKFEE--DRGNL 220
Query: 195 KLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRGGLRRYTDQLGHL 254
+ A IV + + + I ++ D + ++ +
Sbjct: 221 EKARIVFQMAL----------------DYIGEDEDAM-----------------EKAQSV 247
Query: 255 WNSLADYYIRSGLFERARDIYEEAIQTV---------TTVRDFTQVFDAYAQFEELSLNK 305
+ + A R +ERAR IY+ A++ + ++ F + F E+ + K
Sbjct: 248 FTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDTVIGK 307
Query: 306 RM----EEIAENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRV 361
R EE+A + D + +RLE+ R LL + + + KRV
Sbjct: 308 RRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGG-----SQDQLQQAVKRV 362
Query: 362 RLFDGKPLDIIRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLED-ARLIFDKA-T 419
R ++ V + K + LW+ + F E++ + D R I+ A
Sbjct: 363 R-------EVYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYKAAIA 415
Query: 420 LVPYTKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYK 479
LVP+ + A +W ++A E+R + AA +++ A +
Sbjct: 416 LVPHRRF-TFAKLWVQYARFEVRRLELTAARKILGAAIGMAPK----------------- 457
Query: 480 SIKLWSLYADLEESFGTF----KAYEKGIALFKW-PYIFDIWNTY--LTKFLSRYGGTKL 532
+KL+S Y +LE S F K YEK + +W P W + L K L
Sbjct: 458 -LKLFSSYIELEVSLKEFDRARKIYEKAL---EWDPTNSQTWVRFAELEKNL-----FDT 508
Query: 533 ERARDLFEQCLEACPPRYA-------KTLYLLYAKLEEEHGLARHAMAVYERATGAVLPE 585
+RAR LFE + A + ++ Y E E A+YER
Sbjct: 509 DRARALFELGVGQAEGGEASGGLDMPEIVWKAYIDFEFEEREWEKVDALYERLLAKSGHV 568
Query: 586 EMFEMFNIY-IKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDR-- 642
+++ + + I +A I + + P+R++ E E L + R
Sbjct: 569 KVWISYALSKINRATAIEEDEDEEDDDHDHDDDMAATPSRELT----EEEEALRQQRRSA 624
Query: 643 ----ARAIYAHC------SQICDPRVTAGFWAAWKSFEITHGNEDTM 679
AR I+ + D RV +WKSFE HG+ +T+
Sbjct: 625 LASSAREIFQRAYDNLKSRSLKDERV--ALLESWKSFEQQHGSAETL 669
>sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=2 SV=2
Length = 1862
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 515 IWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAK---TLYLLYAKLEEEHGLARHA 571
+W Y+ L T++E+AR + E+ L+ R + +++ LE +G
Sbjct: 1612 LWLQYMAFHLQ---ATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESL 1668
Query: 572 MAVYERATGAVLPEEMF-----------------EMFN-----------IYIKKAAEIYG 603
V+ERA P ++F E++N ++IK A + G
Sbjct: 1669 TKVFERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAVWIKYGAFVLG 1728
Query: 604 IPK---TRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTA 660
+ + ++ +RA+E LP + + +KFA++E +LG+++RA+AI+ + R
Sbjct: 1729 RSQAGASHRVLQRALECLPAKEHVDVIVKFAQLEFQLGDVERAKAIFENTLSTYPKRTDV 1788
Query: 661 GFWAAWKSFEITHGNEDTMREM 682
W+ + I HG++ +R++
Sbjct: 1789 --WSVYIDMTIKHGSQTAVRDI 1808
Score = 36.2 bits (82), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 88 YEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPL 147
Y++ + R L + +W+ YG F++ + + + V RAL LP +H V
Sbjct: 1698 YKEAGELYNRMLKRFRQEKAVWIKYGAFVLGRSQAGASHRVLQRALECLPAKEHVDVIVK 1757
Query: 148 YLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLS-SIERLDEAAVK 195
+ E A +F L +P+ + + Y+ +I+ + AV+
Sbjct: 1758 FAQLEFQLGDVERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQTAVR 1806
>sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3
Length = 1871
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 39/202 (19%)
Query: 515 IWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAK---TLYLLYAKLEEEHGLARHA 571
+W Y+ L T++E+AR + E+ L+ R + +++ LE +G
Sbjct: 1621 LWLQYMAFHLQ---ATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESL 1677
Query: 572 MAVYERATGAVLPEEMF-EMFNIYIK-----KAAEIYG--IPKTRQ-------------- 609
V+ERA P ++F + +IY K +A E+Y + + RQ
Sbjct: 1678 TKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLR 1737
Query: 610 ---------IYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTA 660
+ +RA+E LP + + KFA++E +LG+ +RA+AI+ + R
Sbjct: 1738 RSQAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDV 1797
Query: 661 GFWAAWKSFEITHGNEDTMREM 682
W+ + I HG++ +R++
Sbjct: 1798 --WSVYIDMTIKHGSQKDVRDI 1817
Score = 36.6 bits (83), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 40/96 (41%)
Query: 88 YEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPL 147
+++ + R L + +W+ YG FL+ + + + V RAL LP +H V
Sbjct: 1707 FQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRSQAAASHRVLQRALECLPSKEHVDVIAK 1766
Query: 148 YLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYL 183
+ E A +F L +P+ + + Y+
Sbjct: 1767 FAQLEFQLGDAERAKAIFENTLSTYPKRTDVWSVYI 1802
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1
Length = 1874
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 36/187 (19%)
Query: 530 TKLERARDLFEQCLEACPPRYAK---TLYLLYAKLEEEHGLARHAMAVYERATGAVLPEE 586
T++E+AR + E+ L+ R + +++ LE +G V+ERA P +
Sbjct: 1636 TEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNEPLK 1695
Query: 587 MF-EMFNIYIK-----KAAEIYG--IPKTRQ-----------------------IYERAI 615
+F + +IY K +A E+Y + + RQ + +RA+
Sbjct: 1696 VFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLRRGKAEASHRVMQRAL 1755
Query: 616 ESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGN 675
E LP++ + KFA++E +LG+ +RARAI+ I R W+ + I HG+
Sbjct: 1756 ECLPKKEHVDVIAKFAQLEFQLGDAERARAIFESTLSIYPKRTD--VWSVYIDMIIKHGS 1813
Query: 676 EDTMREM 682
+ R +
Sbjct: 1814 QKEARAI 1820
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 27/153 (17%)
Query: 432 VWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLE 491
VW ++ LR G+ EA+ R+M RA P H + + + +A LE
Sbjct: 1730 VWVKYGAFLLRRGKAEASHRVMQRALE--CLPKKEH-------------VDVIAKFAQLE 1774
Query: 492 ESFGTFKAYEKGIALFK-----WPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLE-A 545
G E+ A+F+ +P D+W+ Y+ + ++G K AR +FE+ + +
Sbjct: 1775 FQLGD---AERARAIFESTLSIYPKRTDVWSVYIDMII-KHGSQK--EARAIFERVIHLS 1828
Query: 546 CPPRYAKTLYLLYAKLEEEHGLARHAMAVYERA 578
P+ K + Y E++HG + AV +A
Sbjct: 1829 LAPKRMKFFFKRYLDYEKQHGSEKDVQAVKAKA 1861
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 88 YEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPL 147
+++ + R L + +W+ YG FL+ + K + V RAL LP +H V
Sbjct: 1710 FQEAGELYNRMLKRFRQEKAVWVKYGAFLLRRGKAEASHRVMQRALECLPKKEHVDVIAK 1769
Query: 148 YLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSI 186
+ E A +F L ++P+ + + Y+ I
Sbjct: 1770 FAQLEFQLGDAERARAIFESTLSIYPKRTDVWSVYIDMI 1808
>sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1
Length = 687
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 555 YLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERA 614
++ YA+ E E R A +++ERA ++ ++ YI ++ I R + RA
Sbjct: 68 WIRYAQFEIEQHDMRRARSIFERAL--LVDSSFIPLWIRYIDAELKVKCINHARNLMNRA 125
Query: 615 IESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAH-CSQICDPRVTAGFWAAWKSFEITH 673
I +LP ++ K+ +E L ++ R++Y CS +P V A W ++ FEI
Sbjct: 126 ISTLPR--VDKLWYKYLIVEESLNNVEIVRSLYTKWCS--LEPGVNA--WNSFVDFEIRQ 179
Query: 674 GNEDTMREM 682
N + +RE+
Sbjct: 180 KNWNGVREI 188
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 554 LYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYER 613
++L+YAK H A + +A G + P+ + F YI+ ++ + R+IYE+
Sbjct: 406 IWLMYAKFLIRHDDVPKARKILGKAIG-LCPKA--KTFKGYIELEVKLKEFDRVRKIYEK 462
Query: 614 AIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYA 648
IE P + Q+ ++ E+E LG+ DR R IY
Sbjct: 463 FIEFQPSDL--QIWSQYGELEENLGDWDRVRGIYT 495
>sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3
SV=1
Length = 683
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 527 YGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEE 586
Y + RAR +FE+ L P ++L Y E HA + RAT A+LP
Sbjct: 71 YEQRDMRRARSVFERALAVAPGDV--VVWLRYVDCELRARDVNHARNLLVRAT-ALLPR- 126
Query: 587 MFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAI 646
+ +++ Y+ + + R +Y + EP F + ET+ G+++ R +
Sbjct: 127 VDKLWYKYVLMEESLGQVELVRGVYTKWCTL---EPAAAAWDAFVDFETRQGQVEHVREV 183
Query: 647 YAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREM 682
Y+ + A W W +FE HG+ T+R +
Sbjct: 184 YSRYVMV---HPVAATWLKWVAFERKHGDAGTVRRV 216
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 20 YEEEILRNPFSVKHWLRYIE---HKKNAPKAIINTIYERSLKELPGSYKLWYNYL--KLR 74
+EE + RN V+ WLRY +++ +A +++ER+L PG +W Y+ +LR
Sbjct: 49 FEEALKRNRLDVRQWLRYAAFEYEQRDMRRA--RSVFERALAVAPGDVVVWLRYVDCELR 106
Query: 75 RKQVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQH--KITQTRHVFDRA 132
+ V N R+ + ++ ++W Y LM++ ++ R V+ +
Sbjct: 107 ARDVN----------HARNLLVRATALLPRVDKLWYKY--VLMEESLGQVELVRGVYTKW 154
Query: 133 LRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEYLSSIERL--D 190
P W ++ F E V+ RY+ + P A +++++ + ER D
Sbjct: 155 CTLEPAAA---AWDAFVDFETRQGQVEHVREVYSRYVMVHPV-AATWLKWV-AFERKHGD 209
Query: 191 EAAVKLAYIVNKESFVSKHGKSNHQL 216
V+ Y + ++ + G H++
Sbjct: 210 AGTVRRVYSLACDTLTAFAGADVHEV 235
Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 42/254 (16%)
Query: 395 WIEFGKF-YEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAALRLM 453
W+ + F YE D + AR +F++A V V VW + + ELRA A L+
Sbjct: 63 WLRYAAFEYEQRD-MRRARSVFERALAVAPGDV----VVWLRYVDCELRARDVNHARNLL 117
Query: 454 ARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGTFKAYEKGIALFKWPYI- 512
RATA R KLW Y +EES G + +G+ KW +
Sbjct: 118 VRATALLPR-----------------VDKLWYKYVLMEESLGQVELV-RGV-YTKWCTLE 158
Query: 513 --FDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARH 570
W+ ++ F +R G ++E R+++ + + P +L + E +HG A
Sbjct: 159 PAAAAWDAFV-DFETRQG--QVEHVREVYSRYVMVHP---VAATWLKWVAFERKHGDAGT 212
Query: 571 AMAVYERATGAVLP------EEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTR 624
VY A + E+ ++ + + A + ++R + A+ PE T
Sbjct: 213 VRRVYSLACDTLTAFAGADVHEVEQLVVSFAEWEATQQELERSRAVLSVAVSRWPESSTL 272
Query: 625 QMCLKFAEMETKLG 638
+ A++E K G
Sbjct: 273 KDAT--AQLEKKFG 284
Score = 36.6 bits (83), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 484 WSLYADL-EESF----------GTFKAYEKGIAL-FKWPYIFDIWNTYLTKFLSRYGGTK 531
W LY DL EESF T KA + +W ++W YL + +
Sbjct: 314 WWLYLDLLEESFPAELRAALAEATVKAVPRSQEKDMQWRKYVNLWLRYLLFLETVLVDSD 373
Query: 532 LERARDLFEQCLEACPPRYAKTL---YLLYAKLEEEHGLARHAMAVYERATGAVLPEEMF 588
L R+ ++++ + P T +++YA+ E A + + G + P+
Sbjct: 374 LTRS--MYQKLVREVIPNTKFTFAKAWIMYAEFEIRQEKLDKARKILGMSLG-MCPKP-- 428
Query: 589 EMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIY 647
++F YI ++ + R+++E+ +E P+ + +++AE+E LG+ DRAR IY
Sbjct: 429 KLFQYYIDLEIKLKEFDRVRRLHEKLLEFQPDVLSN--WIEYAELEENLGDEDRARGIY 485
>sp|Q6FW76|CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CLF1
PE=3 SV=1
Length = 695
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 137/368 (37%), Gaps = 71/368 (19%)
Query: 369 LDIIRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVED 428
DI+R + +++P V W F F ++ ED R I+ K Y +
Sbjct: 145 FDIVRNLFQKWCSLEPAAHV------WDSFTDFEVRQERYEDVRNIYSK-----YVLIHP 193
Query: 429 LATVWCEWAELELRAGQEEA-----ALRLMARATATPARPVAYHD--------------E 469
+ W +W E+R G + +L L A + +R D +
Sbjct: 194 QFSTWRKWINFEVRYGSTKTVRSVYSLALDALIAYSESRNELVDDCINLIVEFSKWEALQ 253
Query: 470 AETVQARVY---------KSIKLWSLYADLEESFGTFKAYEKGIALFKWP---------- 510
E ++++ KS L + E GT + E I L +
Sbjct: 254 KEYIRSKSLLEIAIQKWPKSNTLNNALLQFEREHGTAETLENTIILNRKKHYEDILNEKV 313
Query: 511 YIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPP------RYAKTLYLLYAKLEEE 564
Y +D W YL + Y +E F L A P +Y K L++ K
Sbjct: 314 YDYDTWLLYLQLLENNYPKLVME----AFSNVLNAAIPTSRTKDKYWKQYILIWIKYLTF 369
Query: 565 HGLARHAMAV----YERATGAVLPEEMFEMFNIYIKKAA-EIY--GIPKTRQIYERAIES 617
L + + + +E ++P + F I+I A EI + K R I R S
Sbjct: 370 LELTINDIPLCGQKFEELIHNIIPNDDFTFSKIWILYAEFEIRQDNLEKARSILGR---S 426
Query: 618 LPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNED 677
L P R+ + ++ETKL E DR R +Y + + DP + W A+ FE + G+E
Sbjct: 427 LGLCPKRKTFKYYIDLETKLREFDRVRILYENFLKF-DP-LNLDTWRAYVEFEDSLGDEV 484
Query: 678 TMREMLRI 685
+R + I
Sbjct: 485 RVRSVCMI 492
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 49/173 (28%)
Query: 109 WLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRY 168
W+ Y F ++QH + + R +F+RALR H PL++ +++S
Sbjct: 64 WMRYAVFEIEQHDMRRARSIFERALRV-----HISYVPLWIRYIESE------------- 105
Query: 169 LKL-FPEDAEDYIE-YLSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQ 226
LKL + A + +E ++ + R+D+ K Y++ +ES H L+ + C +
Sbjct: 106 LKLGYINHARNILERAITKLPRVDKLWYK--YLIVEESLA--HFDIVRNLFQKWCSL--- 158
Query: 227 NPDKIRSLNVDAIIRGGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAI 279
+ H+W+S D+ +R +E R+IY + +
Sbjct: 159 ----------------------EPAAHVWDSFTDFEVRQERYEDVRNIYSKYV 189
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 532 LERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGLARHAMAVYERATGAVLPEEMFEMF 591
+ RAR +FE+ L L++ Y + E + G HA + ERA LP + +++
Sbjct: 77 MRRARSIFERALRVHISYVP--LWIRYIESELKLGYINHARNILERAITK-LPR-VDKLW 132
Query: 592 NIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMCLKFAEMETKLGEIDRARAIYAHCS 651
Y+ + R ++++ SL EP + F + E + + R IY+
Sbjct: 133 YKYLIVEESLAHFDIVRNLFQKWC-SL--EPAAHVWDSFTDFEVRQERYEDVRNIYSKYV 189
Query: 652 QICDPRVTAGFWAAWKSFEITHGNEDTMREM 682
I P+ + W W +FE+ +G+ T+R +
Sbjct: 190 LI-HPQFST--WRKWINFEVRYGSTKTVRSV 217
Score = 32.7 bits (73), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 17/138 (12%)
Query: 31 VKHWLRYIEHKKNAPKAIIN---TIYERSLKELPGSYKLWYNYLKLRRKQVKGKVITDPS 87
V W+RYIE + IN I ER++ +LP KLWY YL + +
Sbjct: 95 VPLWIRYIESE--LKLGYINHARNILERAITKLPRVDKLWYKYLIVEE--------SLAH 144
Query: 88 YEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPL 147
++ V N F++ + +W + F + Q + R+++ + + P W
Sbjct: 145 FDIVRNLFQK-WCSLEPAAHVWDSFTDFEVRQERYEDVRNIYSKYVLIHP---QFSTWRK 200
Query: 148 YLSFVKSHAVPETAVRVF 165
+++F + +T V+
Sbjct: 201 WINFEVRYGSTKTVRSVY 218
>sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CLF1 PE=3 SV=2
Length = 758
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 118/298 (39%), Gaps = 73/298 (24%)
Query: 427 EDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIKLWSL 486
E+ AT+ W E+ G+ A + + D+ ++ +++
Sbjct: 299 EEFATIISSWTSWEVSCGEASRANEIFKLLLDNKTNKLEISDKTKS---------SIYTA 349
Query: 487 YADLEESFGTFKAYEKGIAL---FKW-------PYIFDIWNTYLTKFLSRYGGTKLERA- 535
+ + E++FG + E+ + + K+ PY +D W Y+T + + LE A
Sbjct: 350 FVEFEKNFGNKDSIEQSVLIKRRIKYEQEIQNDPYDYDSWWKYMTLLQNSSNKSDLENAF 409
Query: 536 -----------------------------------------RDLFEQCLEACPPR---YA 551
R+++ CL+ P + +A
Sbjct: 410 KKVTGNVVHDKHKSIKWRRYIMFWIWYAFWEEMTNNNPDSAREIWNNCLKVIPHKSFTFA 469
Query: 552 KTLYLLYAKLE---EEHGLARHAMAVYERATGAV-LPEEMFEMFNIYIKKAAEIYGIPKT 607
K +++ Y++ E E GLA+ A + RA G + + ++F YI ++ +
Sbjct: 470 K-VWIGYSEFELRNSEDGLAK-ARKILGRAIGQTSINKPKIKIFKYYIDLEKKLGDWNRV 527
Query: 608 RQIYERAIE-SLPEEPTRQMCL-KFAEMETKLGEIDRARAIYAHCSQIC-DPRVTAGF 662
R ++++ +E SL + ++ + K+ E E+ + E DR +I + Q+ +P ++ F
Sbjct: 528 RLLFQKWLEVSLLTTSSSELVIEKYVEFESSIEEYDRCDSILSSARQLSENPEYSSSF 585
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 169/429 (39%), Gaps = 74/429 (17%)
Query: 95 FERSL-VFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPLYLSFVK 153
ER+L V + +P W+ Y + + I R++ +RA+ LP + +++W LY+ +
Sbjct: 144 LERALDVNIQHVP-FWIQYIQLELSHKNINHARNLMERAINTLP--RVNKLWFLYVQTEE 200
Query: 154 SHAVPETAVRVFRRYLKLFPEDA--EDYIEYLSSIERLDEAAVKLAYIVNKESFVSKHGK 211
VF R+L P+ + + YI + + E + V H
Sbjct: 201 MLKNYPMVRAVFERWLDWHPDTSVWDAYINFEARYEEKENVRTIFKKYV--------HEF 252
Query: 212 SNHQLWNELCEM-ISQNPDKIRSLN------VDAIIRGGLRRYTD--QLGHLWNSLADYY 262
N W + + + N D + ++ VD ++ D + + +S +
Sbjct: 253 PNAGTWYKWIKYEMENNRDDVNTVRAVFESAVDTLLSNKSEENDDDEEFATIISSWTSWE 312
Query: 263 IRSGLFERARDIYEEAIQTVTT---VRDFTQ--VFDAYAQFEELSLNKRMEEIAENDTPS 317
+ G RA +I++ + T + D T+ ++ A+ +FE+ NK
Sbjct: 313 VSCGEASRANEIFKLLLDNKTNKLEISDKTKSSIYTAFVEFEKNFGNK------------ 360
Query: 318 EEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVRLFDGKP--LDIIRTY 375
D IE + L++RR+ + + +P++ W K + L D+ +
Sbjct: 361 --DSIEQSV-------LIKRRIKYEQEI--QNDPYDYDSWWKYMTLLQNSSNKSDLENAF 409
Query: 376 TEAVKTV--DPKLAVG--KLHTLWIEFGKFYE--VNDQLEDARLIFDKATLVPYTKVEDL 429
+ V D ++ + WI + F+E N+ + AR I++ V K
Sbjct: 410 KKVTGNVVHDKHKSIKWRRYIMFWIWYA-FWEEMTNNNPDSAREIWNNCLKVIPHKSFTF 468
Query: 430 ATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYK-SIKLWSLYA 488
A VW ++E ELR ++ +A+A R + Q + K IK++ Y
Sbjct: 469 AKVWIGYSEFELRNSEDG-----LAKARKILGRAIG--------QTSINKPKIKIFKYYI 515
Query: 489 DLEESFGTF 497
DLE+ G +
Sbjct: 516 DLEKKLGDW 524
>sp|Q7KRW8|PRP39_DROME Pre-mRNA-processing factor 39 OS=Drosophila melanogaster GN=CG1646
PE=1 SV=1
Length = 1066
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 2 ESTGFTG----IYTTENEEDL-----PYEEEILRNPFSVKHWLRYIEH-KKNAPKAIINT 51
+ST FTG + +NE D Y+ + P+ +W +Y ++ K+ KA
Sbjct: 375 DSTDFTGWTYLLQYVDNESDAEAAREAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYK 434
Query: 52 IYERSLKELPGSYKLWYNYLKLRRKQVKGKVITDPSYEDVNNTFERSLVFMH---KMPRI 108
++ER L+ +P S LW +YL VK D ++ V + +ER++ + ++
Sbjct: 435 VFERGLEAIPLSVDLWIHYL----MHVKSNHGDDETF--VRSQYERAVKACGLEFRSDKL 488
Query: 109 WLDYGRFLMDQHKITQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAV 157
W Y R+ + + + ++DR L A+P ++ + + + H V
Sbjct: 489 WDAYIRWENESKRYHRVVQIYDRLL-AIPTQGYNGHFDNFQDLINQHDV 536
>sp|O94906|PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Homo sapiens GN=PRPF6 PE=1 SV=1
Length = 941
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 37/321 (11%)
Query: 395 WIEFGKFYEVNDQLEDARLIFDKAT-LVPYTKVEDLATVWCEWAELELRAGQEEAALRLM 453
WI + EV +L+ AR + K T + P K ED VW E A L+ +A +
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCP--KSED---VWLEAARLQP-GDTAKAVVAQA 365
Query: 454 ARATATPARPVAYHDEAET-VQAR----------VYKSIKLWSLYADLEESFGTFKAYEK 502
R R E ET ++A+ V S++LW +LEE +
Sbjct: 366 VRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSR 425
Query: 503 GIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLE 562
+ P ++W L Y E AR + + E P + +++ AKLE
Sbjct: 426 AVECC--PTSVELW--LALARLETY-----ENARKVLNKARENIP--TDRHIWITAAKLE 474
Query: 563 EEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEI--YGIPKTRQIYERAIESLP- 619
E +G + + +RA ++ + +I+ A E G T Q RA+ +
Sbjct: 475 EANGNTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGI 534
Query: 620 -EEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDT 678
EE + ++ A+ ++ ARAIYA+ Q+ + + AA+ FE HG ++
Sbjct: 535 EEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAY--FEKNHGTRES 592
Query: 679 MREMLRIKRSVQAQYNTQVLF 699
+ +L +R+V +VL+
Sbjct: 593 LEALL--QRAVAHCPKAEVLW 611
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 17/159 (10%)
Query: 21 EEEILRNPFSVKHWLRYIEHKKNAP-KAIINTIYERSLKELPGSYKLWYNYLKLR-RKQV 78
E+ L+NP + WL + + A K I NT+ ++L+E P S LW + L R Q
Sbjct: 767 EKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQR 826
Query: 79 KGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPI 138
+ K + +L P + L + Q KIT+ R F R ++
Sbjct: 827 RTKSVD-------------ALKKCEHDPHVLLAVAKLFWSQRKITKAREWFHRTVKI--D 871
Query: 139 TQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAE 177
+ W + F H E V +R P E
Sbjct: 872 SDLGDAWAFFYKFELQHGTEEQQEEVRKRCESAEPRHGE 910
Score = 37.0 bits (84), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 121/309 (39%), Gaps = 51/309 (16%)
Query: 394 LWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQE--EAALR 451
+W+ K ND+ E AR + KA T + +V EW + +RA Q+ E ALR
Sbjct: 644 IWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALR 703
Query: 452 LMARATATPARPVAYHDEAETVQARVYKSIKLWSLYADLEESFGTF----KAYEKGIALF 507
Y D KLW + +EE +AY +G L
Sbjct: 704 -------------HYEDFP-----------KLWMMKGQIEEQKEMMEKAREAYNQG--LK 737
Query: 508 KWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGL 567
K P+ +W L++ + G +L RAR + E+ P L+L +LE GL
Sbjct: 738 KCPHSTPLW-LLLSRLEEKIG--QLTRARAILEKSRLKNPKNPG--LWLESVRLEYRAGL 792
Query: 568 ARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIY--GIPKTRQIYERAIESLPEEPTRQ 625
A + +A + E N I + I+ P+ R A++ +P
Sbjct: 793 KNIANTLMAKA--------LQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHDP--H 842
Query: 626 MCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRI 685
+ L A++ +I +AR + +I A WA + FE+ HG E+ E+ +
Sbjct: 843 VLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDA--WAFFYKFELQHGTEEQQEEVRKR 900
Query: 686 KRSVQAQYN 694
S + ++
Sbjct: 901 CESAEPRHG 909
>sp|Q91YR7|PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mus musculus GN=Prpf6 PE=2 SV=1
Length = 941
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 37/321 (11%)
Query: 395 WIEFGKFYEVNDQLEDARLIFDKAT-LVPYTKVEDLATVWCEWAELELRAGQEEAALRLM 453
WI + EV +L+ AR + K T + P K ED VW E A L+ +A +
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCP--KSED---VWLEAARLQ-PGDTAKAVVAQA 365
Query: 454 ARATATPARPVAYHDEAET-VQAR----------VYKSIKLWSLYADLEESFGTFKAYEK 502
R R E ET ++A+ V S++LW +LEE +
Sbjct: 366 VRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSR 425
Query: 503 GIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLE 562
+ P ++W L Y E AR + + E P + +++ AKLE
Sbjct: 426 AVECC--PTSVELW--LALARLETY-----ENARKVLNKARENIP--TDRHIWITAAKLE 474
Query: 563 EEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEI--YGIPKTRQIYERAIESLP- 619
E +G + + +RA ++ + +I+ A E G T Q RA+ +
Sbjct: 475 EANGNTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGI 534
Query: 620 -EEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDT 678
EE + ++ A+ ++ ARAIYA+ Q+ + + AA+ FE HG ++
Sbjct: 535 EEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAY--FEKNHGTRES 592
Query: 679 MREMLRIKRSVQAQYNTQVLF 699
+ +L +R+V +VL+
Sbjct: 593 LEALL--QRAVAHCPKAEVLW 611
Score = 37.7 bits (86), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 17/159 (10%)
Query: 21 EEEILRNPFSVKHWLRYIEHKKNAP-KAIINTIYERSLKELPGSYKLWYNYLKLR-RKQV 78
E+ L+NP + WL + + A K I NT+ ++L+E P S LW + L R Q
Sbjct: 767 EKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQR 826
Query: 79 KGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPI 138
K K + +L P + L + + KIT+ R F R ++
Sbjct: 827 KTKSVD-------------ALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKI--D 871
Query: 139 TQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAE 177
+ W + F H E V +R P E
Sbjct: 872 SDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHGE 910
Score = 36.6 bits (83), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 130/326 (39%), Gaps = 67/326 (20%)
Query: 390 KLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAA 449
K LW+ K + + AR I A + + +W +LE + E A
Sbjct: 606 KAEVLWLMGAKSKWLAGDVPAARSILALA----FQANPNSEEIWLAAVKLESENNEYERA 661
Query: 450 LRLMARATATPARPVAYHDEAETVQARVY-KSIKL-W---SLYADLEESFGTFKAYEKGI 504
RL+A+A ++ ARV+ KS+KL W ++ A E + YE
Sbjct: 662 RRLLAKARSS------------APTARVFMKSVKLEWVLGNISAAQELCEEALRHYE--- 706
Query: 505 ALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEE 564
D ++ K G +E+AR+ + Q L+ CP ++ L+LL ++LEE+
Sbjct: 707 ---------DFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCP--HSTPLWLLLSRLEEK 755
Query: 565 HGLARHAMAVYERA-------TGAVLPEEMFE-------MFNIYIKKAAEIYGIPKTRQI 610
G A A+ E++ G L E + N + KA + P + +
Sbjct: 756 IGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKA--LQECPNSGIL 813
Query: 611 YERAI--ESLPEEPTRQM-CLKFAEMETKL-----------GEIDRARAIYAHCSQICDP 656
+ A+ E+ P+ T+ + LK E + + +I +AR + +I
Sbjct: 814 WSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSD 873
Query: 657 RVTAGFWAAWKSFEITHGNEDTMREM 682
A WA + FE+ HG E+ E+
Sbjct: 874 LGDA--WAFFYKFELQHGTEEQQEEV 897
>sp|A1A5S1|PRP6_RAT Pre-mRNA-processing factor 6 OS=Rattus norvegicus GN=Prpf6 PE=2
SV=1
Length = 941
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 37/321 (11%)
Query: 395 WIEFGKFYEVNDQLEDARLIFDKAT-LVPYTKVEDLATVWCEWAELELRAGQEEAALRLM 453
WI + EV +L+ AR + K T + P K ED VW E A L+ +A +
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCP--KSED---VWLEAARLQ-PGDTAKAVVAQA 365
Query: 454 ARATATPARPVAYHDEAET-VQAR----------VYKSIKLWSLYADLEESFGTFKAYEK 502
R R E ET ++A+ V S++LW +LEE +
Sbjct: 366 VRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSR 425
Query: 503 GIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLE 562
+ P ++W L Y E AR + + E P + +++ AKLE
Sbjct: 426 AVECC--PTSVELW--LALARLETY-----ENARKVLNKARENIP--TDRHIWITAAKLE 474
Query: 563 EEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEI--YGIPKTRQIYERAIESLP- 619
E +G + + +RA ++ + +I+ A E G T Q RA+ +
Sbjct: 475 EANGNTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGI 534
Query: 620 -EEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDT 678
EE + ++ A+ ++ ARAIYA+ Q+ + + AA+ FE HG ++
Sbjct: 535 EEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAY--FEKNHGTRES 592
Query: 679 MREMLRIKRSVQAQYNTQVLF 699
+ +L +R+V +VL+
Sbjct: 593 LEALL--QRAVAHCPKAEVLW 611
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 35/194 (18%)
Query: 390 KLHTLWIEFGKFYEVNDQLEDARLIFDKATLVPYTKVEDLATVWCEWAELELRAGQEEAA 449
K LW+ K + + AR I A + + +W +LE + E A
Sbjct: 606 KAEVLWLMGAKSKWLAGDVPAARSILALA----FQANPNSEEIWLAAVKLESENNEYERA 661
Query: 450 LRLMARATATPARPVAYHDEAETVQARVY-KSIKL-W---SLYADLEESFGTFKAYEKGI 504
RL+A+A ++ ARV+ KS+KL W ++ A E + YE
Sbjct: 662 RRLLAKARSS------------APTARVFMKSVKLEWVLGNITAAQELCEEALRHYE--- 706
Query: 505 ALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEE 564
D ++ K G +ERAR+ + Q L+ CP ++ L+LL ++LEE+
Sbjct: 707 ---------DFPKLWMMKGQIEEQGELMERAREAYNQGLKKCP--HSTPLWLLLSRLEEK 755
Query: 565 HGLARHAMAVYERA 578
G A A+ E++
Sbjct: 756 IGQLTRARAILEKS 769
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 17/159 (10%)
Query: 21 EEEILRNPFSVKHWLRYIEHKKNAP-KAIINTIYERSLKELPGSYKLWYNYLKLR-RKQV 78
E+ L+NP + WL + + A K I NT+ ++L+E P S LW + L R Q
Sbjct: 767 EKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQR 826
Query: 79 KGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALRALPI 138
K K + +L P + L + + KIT+ R F R ++
Sbjct: 827 KTKSVD-------------ALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKI--D 871
Query: 139 TQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAE 177
+ W + F H E V +R P E
Sbjct: 872 SDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHGE 910
>sp|Q2KJJ0|PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bos taurus GN=PRPF6 PE=2 SV=1
Length = 941
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 37/321 (11%)
Query: 395 WIEFGKFYEVNDQLEDARLIFDKAT-LVPYTKVEDLATVWCEWAELELRAGQEEAALRLM 453
WI + EV +L+ AR + K T + P K ED VW E A L+ +A +
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCP--KSED---VWLEAARLQ-PGDTAKAVVAQA 365
Query: 454 ARATATPARPVAYHDEAET-VQAR----------VYKSIKLWSLYADLEESFGTFKAYEK 502
R R E ET ++A+ V S++LW +LEE +
Sbjct: 366 VRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSR 425
Query: 503 GIALFKWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLE 562
+ P ++W L Y E AR + + E P + +++ AKLE
Sbjct: 426 AVECC--PTSVELW--LALARLETY-----ENARKVLNKARENIP--TDRHIWITAAKLE 474
Query: 563 EEHGLARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEI--YGIPKTRQIYERAIESLP- 619
E +G + + +RA ++ + +I+ A E G T Q RA+ +
Sbjct: 475 EANGNTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGI 534
Query: 620 -EEPTRQMCLKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDT 678
EE + ++ A+ ++ ARAIYA+ Q+ + + AA+ FE HG ++
Sbjct: 535 EEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAY--FEKNHGTRES 592
Query: 679 MREMLRIKRSVQAQYNTQVLF 699
+ +L +R+V +VL+
Sbjct: 593 LEALL--QRAVAHCPKAEVLW 611
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Query: 21 EEEILRNPFSVKHWLRYIEHKKNAP-KAIINTIYERSLKELPGSYKLWYNYLKLR-RKQV 78
E+ L+NP + WL + + A K I +T+ ++L+E P S LW + L R Q
Sbjct: 767 EKSRLKNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQECPNSGVLWSEAIFLEARPQR 826
Query: 79 KGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQTRHVFDRALR 134
K K + +L P + L + + KIT+ R F R ++
Sbjct: 827 KTKSVD-------------ALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVK 869
>sp|Q15020|SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo
sapiens GN=SART3 PE=1 SV=1
Length = 963
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 83 ITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQ-TRHVFDRALRALPITQH 141
I DP+ + FER+LV +P +W+ Y ++L Q K+ V +RA+R P T
Sbjct: 323 IGDPAR--IQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTVA 380
Query: 142 HRVWPLYLSFVKSHAVPETAVRV-FRRYLKLFPEDAEDYIE 181
+W YL ++ H V + V F + L A DY+E
Sbjct: 381 --LWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVE 419
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 89 EDVNNTFERSLVFMHKMPRIWLDYGRF----LMDQHKITQTRHVFDRALRA--LPITQHH 142
E V + FE++ V + P IWL+YG++ + + + + R VF+RAL + L +T+
Sbjct: 167 EHVYDLFEKA-VKDYICPNIWLEYGQYSVGGIGQKGGLEKVRSVFERALSSVGLHMTKGL 225
Query: 143 RVWPLYLSF---VKSHAVPETAVRVFRRYLKL 171
+W Y F + A E +FRR L +
Sbjct: 226 ALWEAYREFESAIVEAARLEKVHSLFRRQLAI 257
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 18 LPYEEEILRNPFSVKHWLRYIEH--KKNAPKAIINTIYERSLKELPGSYKLWYNY-LKLR 74
L +E ++ N W+RY ++ ++ K ++ +++ R+++ P + LW Y L +
Sbjct: 331 LIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTVALWSRYLLAME 390
Query: 75 RKQVKGKVITDPSYEDVNNTFERSLVFMHKMPRIW---LDYGR----FLMDQHK-ITQTR 126
R V +VI+ + +N F ++ ++ IW LDY R F D K + + R
Sbjct: 391 RHGVDHQVISVTFEKALNAGFIQATDYVE----IWQAYLDYLRRRVDFKQDSSKELEELR 446
Query: 127 HVFDRALRAL 136
F RAL L
Sbjct: 447 AAFTRALEYL 456
>sp|Q5REG1|SART3_PONAB Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo
abelii GN=SART3 PE=2 SV=1
Length = 981
Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 83 ITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKITQ-TRHVFDRALRALPITQH 141
I DP+ + FER+LV +P +W+ Y ++L Q K+ V +RA+R P T
Sbjct: 341 IGDPAR--IQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTVA 398
Query: 142 HRVWPLYLSFVKSHAVPETAVRV-FRRYLKLFPEDAEDYIE 181
+W YL ++ H V + V F + L A DY+E
Sbjct: 399 --LWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVE 437
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 18 LPYEEEILRNPFSVKHWLRYIEH--KKNAPKAIINTIYERSLKELPGSYKLWYNY-LKLR 74
L +E ++ N W+RY ++ ++ K ++ +++ R+++ P + LW Y L +
Sbjct: 349 LIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTVALWSRYLLAME 408
Query: 75 RKQVKGKVITDPSYEDVNNTFERSLVFMHKMPRIW---LDYGR----FLMDQHK-ITQTR 126
R V +VI+ + +N F ++ ++ IW LDY R F D K + + R
Sbjct: 409 RHGVDHQVISVTFEKALNAGFIQATDYVE----IWQAYLDYLRRRVDFKQDSSKELEELR 464
Query: 127 HVFDRALRAL 136
F RAL L
Sbjct: 465 AAFTRALEYL 474
Score = 33.5 bits (75), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 89 EDVNNTFERSLVFMHKMPRIWLDYGRF----LMDQHKITQTRHVFDRALRA--LPITQHH 142
E V + FE++ V + P IWL+YG++ + + + + R VF+RAL + L +T+
Sbjct: 167 EHVYDLFEKA-VKDYICPNIWLEYGQYSVGGIGQKGGLEKVRSVFERALSSVGLHMTKGL 225
Query: 143 RVWPLYLSF 151
+W Y F
Sbjct: 226 ALWEAYREF 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,791,543
Number of Sequences: 539616
Number of extensions: 11292754
Number of successful extensions: 33273
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 32194
Number of HSP's gapped (non-prelim): 477
length of query: 703
length of database: 191,569,459
effective HSP length: 125
effective length of query: 578
effective length of database: 124,117,459
effective search space: 71739891302
effective search space used: 71739891302
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)