Your job contains 1 sequence.
>psy6462
MQLSWRRGEKKEKELDYQEFLMLDNELFSVLPSGRKASPTSGDESSKKSKKKKHKKDKKK
KSKKSKKRKKKKYSSSSSSDSSSSSEDEWVDKSAVKSSDSSHSSDSDNSDRDTVGPAPKQ
HVTLTQKDYGKALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIERYEAVGYVMSGSRHR
RMEAVRIRKENQIYSADEKRALAMFSKEERQKRENRILTQFKEMVSSKLAKNKD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6462
(234 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039488 - symbol:CG6066 species:7227 "Drosophila m... 498 1.2e-47 1
UNIPROTKB|Q8N5F7 - symbol:NKAP "NF-kappa-B-activating pro... 420 2.3e-39 1
MGI|MGI:1914300 - symbol:Nkap "NFKB activating protein" s... 418 3.7e-39 1
RGD|1565955 - symbol:Nkap "NFKB activating protein" speci... 418 3.7e-39 1
UNIPROTKB|G5E5D9 - symbol:NKAP "Uncharacterized protein" ... 414 9.9e-39 1
UNIPROTKB|F1RUA7 - symbol:NKAP "Uncharacterized protein" ... 414 9.9e-39 1
TAIR|locus:2132358 - symbol:AT4G02720 "AT4G02720" species... 343 3.3e-31 1
WB|WBGene00002696 - symbol:let-504 species:6239 "Caenorha... 329 1.8e-29 1
>FB|FBgn0039488 [details] [associations]
symbol:CG6066 species:7227 "Drosophila melanogaster"
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0022008 "neurogenesis" evidence=IMP] EMBL:AE014297
GO:GO:0022008 GO:GO:0000398 GO:GO:0071013 eggNOG:NOG131493
InterPro:IPR009269 PANTHER:PTHR13087 Pfam:PF06047
GeneTree:ENSGT00510000047021 EMBL:BT003485 RefSeq:NP_651538.1
UniGene:Dm.20266 IntAct:Q9VB74 MINT:MINT-288978 STRING:Q9VB74
PaxDb:Q9VB74 PRIDE:Q9VB74 EnsemblMetazoa:FBtr0085131 GeneID:43267
KEGG:dme:Dmel_CG6066 UCSC:CG6066-RA FlyBase:FBgn0039488
InParanoid:Q9VB74 OMA:LYSADEK OrthoDB:EOG4K0P4T PhylomeDB:Q9VB74
GenomeRNAi:43267 NextBio:833057 Bgee:Q9VB74 Uniprot:Q9VB74
Length = 463
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 99/121 (81%), Positives = 112/121 (92%)
Query: 114 VGPAPKQHVTLTQKDYGKALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIERYEAVGYV 173
VGP+ + +L QKD+GKALLPGEGAAMAAY+AEGKRIPRRGEIGLTSDEI +E+VGYV
Sbjct: 342 VGPSLRPGGSLNQKDFGKALLPGEGAAMAAYIAEGKRIPRRGEIGLTSDEIANFESVGYV 401
Query: 174 MSGSRHRRMEAVRIRKENQIYSADEKRALAMFSKEERQKRENRILTQFKEMVSSKL-AKN 232
MSGSRHRRMEAVRIRKENQ+YSADEKRALAMFSKEERQKREN+IL+QFK+M+ SKL AK+
Sbjct: 402 MSGSRHRRMEAVRIRKENQLYSADEKRALAMFSKEERQKRENKILSQFKDMIHSKLQAKD 461
Query: 233 K 233
K
Sbjct: 462 K 462
>UNIPROTKB|Q8N5F7 [details] [associations]
symbol:NKAP "NF-kappa-B-activating protein" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030851 "granulocyte
differentiation" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0071425 "hematopoietic stem cell proliferation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046638 "positive regulation of
alpha-beta T cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0030851
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 GO:GO:0000122
GO:GO:0033077 GO:GO:0046638 GO:GO:0031490 GO:GO:0071425
GO:GO:0019827 EMBL:AY388958 EMBL:AK026279 EMBL:BC015354
EMBL:BC032442 EMBL:BC071686 IPI:IPI00296934 RefSeq:NP_078804.2
UniGene:Hs.522771 IntAct:Q8N5F7 STRING:Q8N5F7 PhosphoSite:Q8N5F7
DMDM:74728990 PaxDb:Q8N5F7 PeptideAtlas:Q8N5F7 PRIDE:Q8N5F7
DNASU:79576 Ensembl:ENST00000371410 GeneID:79576 KEGG:hsa:79576
UCSC:uc004esg.3 CTD:79576 GeneCards:GC0XM119059 HGNC:HGNC:29873
HPA:HPA000916 MIM:300766 neXtProt:NX_Q8N5F7 PharmGKB:PA162397584
eggNOG:NOG131493 HOGENOM:HOG000049099 HOVERGEN:HBG068915
InParanoid:Q8N5F7 OMA:GSDKPWP OrthoDB:EOG4JDH7S PhylomeDB:Q8N5F7
GenomeRNAi:79576 NextBio:68558 Bgee:Q8N5F7 CleanEx:HS_NKAP
Genevestigator:Q8N5F7 GermOnline:ENSG00000101882 InterPro:IPR009269
PANTHER:PTHR13087 Pfam:PF06047 Uniprot:Q8N5F7
Length = 415
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 91/127 (71%), Positives = 101/127 (79%)
Query: 114 VGP-APKQHVTLTQKD-----YGKALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIERY 167
+GP APK TLT +D YG ALLPGEGAAMA YV GKRIPRRGEIGLTS+EI +
Sbjct: 291 IGPEAPK---TLTSQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASF 347
Query: 168 EAVGYVMSGSRHRRMEAVRIRKENQIYSADEKRALAMFSKEERQKRENRILTQFKEMVSS 227
E GYVMSGSRHRRMEAVR+RKENQIYSADEKRALA F++EER+KREN+IL F+EMV
Sbjct: 348 ECSGYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYR 407
Query: 228 KLAKNKD 234
K K KD
Sbjct: 408 K-TKGKD 413
>MGI|MGI:1914300 [details] [associations]
symbol:Nkap "NFKB activating protein" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IMP] [GO:0030097
"hemopoiesis" evidence=IMP] [GO:0030851 "granulocyte
differentiation" evidence=IMP] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0033077 "T cell differentiation in thymus"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046638 "positive regulation of
alpha-beta T cell differentiation" evidence=ISO] [GO:0071425
"hematopoietic stem cell proliferation" evidence=IMP]
MGI:MGI:1914300 GO:GO:0005634 GO:GO:0005737 GO:GO:0030851
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122 GO:GO:0033077
GO:GO:0046638 GO:GO:0031490 GO:GO:0071425 GO:GO:0019827 CTD:79576
eggNOG:NOG131493 HOGENOM:HOG000049099 HOVERGEN:HBG068915
OrthoDB:EOG4JDH7S InterPro:IPR009269 PANTHER:PTHR13087 Pfam:PF06047
EMBL:AY388959 EMBL:AK011492 EMBL:AK012826 EMBL:AK038344
EMBL:AK089943 EMBL:BC026774 IPI:IPI00458918 RefSeq:NP_080213.3
UniGene:Mm.55422 ProteinModelPortal:Q9D0F4 STRING:Q9D0F4
PhosphoSite:Q9D0F4 PaxDb:Q9D0F4 PRIDE:Q9D0F4
Ensembl:ENSMUST00000016553 GeneID:67050 KEGG:mmu:67050
GeneTree:ENSGT00510000047021 InParanoid:Q9D0F4 NextBio:323428
Bgee:Q9D0F4 CleanEx:MM_NKAP Genevestigator:Q9D0F4
GermOnline:ENSMUSG00000016409 Uniprot:Q9D0F4
Length = 415
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 88/124 (70%), Positives = 99/124 (79%)
Query: 114 VGP-APKQHVTLTQK--DYGKALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIERYEAV 170
+GP APK + K +YG ALLPGEGAAMA YV GKRIPRRGEIGLTS+EI +E
Sbjct: 291 IGPEAPKTLASQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECS 350
Query: 171 GYVMSGSRHRRMEAVRIRKENQIYSADEKRALAMFSKEERQKRENRILTQFKEMVSSKLA 230
GYVMSGSRHRRMEAVR+RKENQIYSADEKRALA F++EER+KREN+IL F+EMV K
Sbjct: 351 GYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYRK-T 409
Query: 231 KNKD 234
K KD
Sbjct: 410 KGKD 413
>RGD|1565955 [details] [associations]
symbol:Nkap "NFKB activating protein" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003682
"chromatin binding" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0019827
"stem cell maintenance" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0030851 "granulocyte differentiation"
evidence=IEA;ISO] [GO:0031490 "chromatin DNA binding"
evidence=IEA;ISO] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0046638
"positive regulation of alpha-beta T cell differentiation"
evidence=ISO;ISS] [GO:0071425 "hematopoietic stem cell
proliferation" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] RGD:1565955 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0030851 GO:GO:0007219 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0033077 GO:GO:0046638 GO:GO:0031490
GO:GO:0071425 GO:GO:0019827 CTD:79576 eggNOG:NOG131493
HOGENOM:HOG000049099 HOVERGEN:HBG068915 OMA:GSDKPWP
OrthoDB:EOG4JDH7S InterPro:IPR009269 PANTHER:PTHR13087 Pfam:PF06047
GeneTree:ENSGT00510000047021 EMBL:BC098011 IPI:IPI00365073
RefSeq:NP_001020043.1 UniGene:Rn.12473 PhosphoSite:Q4V7C9
PRIDE:Q4V7C9 Ensembl:ENSRNOT00000047912 GeneID:298342
KEGG:rno:298342 UCSC:RGD:1565955 InParanoid:Q4V7C9 NextBio:643498
Genevestigator:Q4V7C9 GermOnline:ENSRNOG00000031169 Uniprot:Q4V7C9
Length = 415
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 88/124 (70%), Positives = 99/124 (79%)
Query: 114 VGP-APKQHVTLTQK--DYGKALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIERYEAV 170
+GP APK + K +YG ALLPGEGAAMA YV GKRIPRRGEIGLTS+EI +E
Sbjct: 291 IGPEAPKTLASQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECS 350
Query: 171 GYVMSGSRHRRMEAVRIRKENQIYSADEKRALAMFSKEERQKRENRILTQFKEMVSSKLA 230
GYVMSGSRHRRMEAVR+RKENQIYSADEKRALA F++EER+KREN+IL F+EMV K
Sbjct: 351 GYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYRK-T 409
Query: 231 KNKD 234
K KD
Sbjct: 410 KGKD 413
>UNIPROTKB|G5E5D9 [details] [associations]
symbol:NKAP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071425 "hematopoietic stem cell proliferation"
evidence=IEA] [GO:0046638 "positive regulation of alpha-beta T cell
differentiation" evidence=IEA] [GO:0033077 "T cell differentiation
in thymus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030851 "granulocyte differentiation"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] GO:GO:0005634
GO:GO:0005737 GO:GO:0030851 GO:GO:0000122 GO:GO:0033077
GO:GO:0046638 GO:GO:0031490 GO:GO:0071425 GO:GO:0019827 OMA:GSDKPWP
InterPro:IPR009269 PANTHER:PTHR13087 Pfam:PF06047
GeneTree:ENSGT00510000047021 EMBL:DAAA02067149 EMBL:DAAA02067150
UniGene:Bt.14640 Ensembl:ENSBTAT00000014458 NextBio:20878586
Uniprot:G5E5D9
Length = 417
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 87/124 (70%), Positives = 99/124 (79%)
Query: 114 VGP-APKQHVTLTQK--DYGKALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIERYEAV 170
+GP APK + K +YG ALLPGEGAAMA YV GKRIPRRGEIGLTS+EI +E
Sbjct: 293 IGPEAPKTLASQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECS 352
Query: 171 GYVMSGSRHRRMEAVRIRKENQIYSADEKRALAMFSKEERQKRENRILTQFKEMVSSKLA 230
GYVMSGSRHRRMEAVR+RKENQIYSADEKRALA F++EER+KREN+IL F+EMV K
Sbjct: 353 GYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYRK-T 411
Query: 231 KNKD 234
K K+
Sbjct: 412 KGKE 415
>UNIPROTKB|F1RUA7 [details] [associations]
symbol:NKAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071425 "hematopoietic stem cell proliferation"
evidence=IEA] [GO:0046638 "positive regulation of alpha-beta T cell
differentiation" evidence=IEA] [GO:0033077 "T cell differentiation
in thymus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030851 "granulocyte differentiation"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] GO:GO:0005634
GO:GO:0005737 GO:GO:0030851 GO:GO:0000122 GO:GO:0033077
GO:GO:0046638 GO:GO:0031490 GO:GO:0071425 GO:GO:0019827 OMA:GSDKPWP
InterPro:IPR009269 PANTHER:PTHR13087 Pfam:PF06047
GeneTree:ENSGT00510000047021 EMBL:FP102657
Ensembl:ENSSSCT00000013792 Uniprot:F1RUA7
Length = 417
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 87/124 (70%), Positives = 99/124 (79%)
Query: 114 VGP-APKQHVTLTQK--DYGKALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIERYEAV 170
+GP APK + K +YG ALLPGEGAAMA YV GKRIPRRGEIGLTS+EI +E
Sbjct: 293 IGPEAPKTLASQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECS 352
Query: 171 GYVMSGSRHRRMEAVRIRKENQIYSADEKRALAMFSKEERQKRENRILTQFKEMVSSKLA 230
GYVMSGSRHRRMEAVR+RKENQIYSADEKRALA F++EER+KREN+IL F+EMV K
Sbjct: 353 GYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYRK-T 411
Query: 231 KNKD 234
K K+
Sbjct: 412 KGKE 415
>TAIR|locus:2132358 [details] [associations]
symbol:AT4G02720 "AT4G02720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 InterPro:IPR009269 PANTHER:PTHR13087
Pfam:PF06047 EMBL:AY075686 EMBL:AY102143 IPI:IPI00531384
RefSeq:NP_192181.2 UniGene:At.34274 IntAct:Q8S9I4 PRIDE:Q8S9I4
EnsemblPlants:AT4G02720.1 GeneID:828193 KEGG:ath:AT4G02720
TAIR:At4g02720 HOGENOM:HOG000243180 InParanoid:Q8S9I4 OMA:PALDNEP
PhylomeDB:Q8S9I4 ProtClustDB:CLSN2714409 Genevestigator:Q8S9I4
Uniprot:Q8S9I4
Length = 422
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 65/118 (55%), Positives = 89/118 (75%)
Query: 114 VGPAPKQHVTLTQKDYGKALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIERYEAVGYV 173
VGP P YG AL PGEG A+A YV +GKRIPRRGE+GL ++EI+++E +GYV
Sbjct: 287 VGPMPLPKAE-GHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLNAEEIQKFEDLGYV 345
Query: 174 MSGSRHRRMEAVRIRKENQIYSADEKRALAMFSKEERQKRENRILTQFKEMVSSKLAK 231
MSGSRH+RM A+RIRKENQ+YSA++KRALAMF+ EE+ KRE ++++ + +V + +
Sbjct: 346 MSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKAKREAKVMSDLQRLVQRHMGE 403
>WB|WBGene00002696 [details] [associations]
symbol:let-504 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] GO:GO:0009792 GO:GO:0006898
GO:GO:0040010 GO:GO:0010171 GO:GO:0040011 GO:GO:0040027
GO:GO:0001703 EMBL:FO081024 eggNOG:NOG131493 InterPro:IPR009269
PANTHER:PTHR13087 Pfam:PF06047 GeneTree:ENSGT00510000047021
RefSeq:NP_491301.1 ProteinModelPortal:Q966L6 IntAct:Q966L6
PaxDb:Q966L6 EnsemblMetazoa:E01A2.4.1 EnsemblMetazoa:E01A2.4.2
GeneID:171995 KEGG:cel:CELE_E01A2.4 UCSC:E01A2.4.1 CTD:171995
WormBase:E01A2.4 InParanoid:Q966L6 OMA:EIANFED NextBio:873585
Uniprot:Q966L6
Length = 504
Score = 329 (120.9 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 63/105 (60%), Positives = 80/105 (76%)
Query: 128 DYGKALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIERYEAVGYVMSGSRHRRMEAVRI 187
+YGK LL GEGA MAAY A G+RIPRRGEIGL+S EI YE VGYVMSGSRH+ MEA R+
Sbjct: 400 NYGKDLLKGEGAGMAAYAARGERIPRRGEIGLSSGEIAEYEKVGYVMSGSRHKAMEATRL 459
Query: 188 RKENQIYSADEKRALAMFSKEERQKRENRILTQFKEMVSSKLAKN 232
RKENQ+++A+EKR L S E ++K+E +L QF+ ++ K +N
Sbjct: 460 RKENQVFTAEEKRILNSVSVEAKKKKEEAVLDQFRNLIHHKNMRN 504
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 234 177 0.00084 109 3 11 23 0.48 32
31 0.50 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 574 (61 KB)
Total size of DFA: 142 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.36u 0.21s 17.57t Elapsed: 00:00:01
Total cpu time: 17.36u 0.21s 17.57t Elapsed: 00:00:01
Start: Thu Aug 15 13:26:21 2013 End: Thu Aug 15 13:26:22 2013