Your job contains 1 sequence.
>psy647
MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR
LVLPTWMNLETLTEIKEEEKKSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD
IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLKDKQCDVDV
TLVTSNSQSQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy647
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-050419-19 - symbol:gins2 "GINS complex subu... 437 3.6e-41 1
UNIPROTKB|Q9Y248 - symbol:GINS2 "DNA replication complex ... 427 4.2e-40 1
UNIPROTKB|Q7ZT46 - symbol:gins2 "DNA replication complex ... 427 4.2e-40 1
RGD|1311055 - symbol:Gins2 "GINS complex subunit 2 (Psf2 ... 425 6.8e-40 1
UNIPROTKB|E1BC42 - symbol:GINS2 "DNA replication complex ... 423 1.1e-39 1
UNIPROTKB|E2QU81 - symbol:GINS2 "DNA replication complex ... 423 1.1e-39 1
MGI|MGI:1921019 - symbol:Gins2 "GINS complex subunit 2 (P... 423 1.1e-39 1
UNIPROTKB|F1S6I3 - symbol:GINS2 "DNA replication complex ... 412 1.6e-38 1
FB|FBgn0261976 - symbol:Psf2 "Psf2" species:7227 "Drosoph... 408 4.3e-38 1
WB|WBGene00009287 - symbol:F31C3.5 species:6239 "Caenorha... 304 4.5e-27 1
TAIR|locus:2101247 - symbol:PSF2 "AT3G12530" species:3702... 293 6.6e-26 1
DICTYBASE|DDB_G0293564 - symbol:gins2 "GINS complex subun... 242 1.7e-20 1
POMBASE|SPBC725.13c - symbol:psf2 "GINS complex subunit P... 223 1.7e-18 1
UNIPROTKB|G4NG20 - symbol:MGG_01917 "DNA replication comp... 123 2.4e-14 2
ASPGD|ASPL0000004061 - symbol:AN5901 species:162425 "Emer... 118 8.2e-14 2
SGD|S000003608 - symbol:PSF2 "Subunit of the GINS complex... 131 1.0e-08 1
>ZFIN|ZDB-GENE-050419-19 [details] [associations]
symbol:gins2 "GINS complex subunit 2" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR007257
ZFIN:ZDB-GENE-050419-19 GO:GO:0005524 GO:GO:0005634 GO:GO:0006260
EMBL:BX548023 InterPro:IPR021151 Pfam:PF05916 eggNOG:COG5093
HOGENOM:HOG000246603 KO:K10733 OMA:VGPFRAG InterPro:IPR016906
PANTHER:PTHR12772 PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838
CTD:51659 HOVERGEN:HBG044983 OrthoDB:EOG4WSWBN EMBL:BC095711
IPI:IPI00495505 RefSeq:NP_001019610.1 UniGene:Dr.79799 SMR:Q4VBJ6
STRING:Q4VBJ6 Ensembl:ENSDART00000033746 GeneID:554146
KEGG:dre:554146 InParanoid:Q4VBJ6 NextBio:20880705 Uniprot:Q4VBJ6
Length = 182
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 84/172 (48%), Positives = 118/172 (68%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
MDPAE+EF+AE + V+IIP F+ L+ I+LI GD+GPF G+P +VP+WLA+NLKQRQKCR
Sbjct: 1 MDPAEVEFLAEKEMVKIIPNFS-LDKIYLIGGDLGPFNPGLPVEVPVWLALNLKQRQKCR 59
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
+V P WM+ F +P+ +YME++ ++L+ AD+IP D IRTL+KD
Sbjct: 60 IVPPEWMDTDKLEDIREQERKLDTFTPIPNPYYMELTKLLLNHAADNIPKADEIRTLVKD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLK 172
IWD R++KLR S D+F+ HA L++LT EIN+ R+ L D L+ M L+
Sbjct: 120 IWDTRMAKLRLSADSFISQQEAHAQLDNLTLMEINTTRSFLLDSLNYMYKLR 171
>UNIPROTKB|Q9Y248 [details] [associations]
symbol:GINS2 "DNA replication complex GINS protein PSF2"
species:9606 "Homo sapiens" [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand
elongation involved in DNA replication" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR007257
Reactome:REACT_115566 GO:GO:0005654 EMBL:CH471114 GO:GO:0000084
Reactome:REACT_383 GO:GO:0006271 InterPro:IPR021151 Pfam:PF05916
PDB:2E9X PDB:2EHO PDB:2Q9Q PDBsum:2E9X PDBsum:2EHO PDBsum:2Q9Q
eggNOG:COG5093 HOGENOM:HOG000246603 KO:K10733 OMA:VGPFRAG
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
EMBL:AF125098 EMBL:AF151880 EMBL:AF201939 EMBL:AK001275
EMBL:CR457186 EMBL:BC003186 EMBL:BC010164 EMBL:BC062444
IPI:IPI00007146 RefSeq:NP_057179.1 UniGene:Hs.433180
ProteinModelPortal:Q9Y248 SMR:Q9Y248 DIP:DIP-29332N IntAct:Q9Y248
MINT:MINT-1469655 STRING:Q9Y248 PhosphoSite:Q9Y248 DMDM:37999822
PRIDE:Q9Y248 DNASU:51659 Ensembl:ENST00000253462 GeneID:51659
KEGG:hsa:51659 UCSC:uc002fja.3 CTD:51659 GeneCards:GC16M085709
HGNC:HGNC:24575 MIM:610609 neXtProt:NX_Q9Y248 PharmGKB:PA145008313
HOVERGEN:HBG044983 InParanoid:Q9Y248 OrthoDB:EOG4WSWBN
PhylomeDB:Q9Y248 ChiTaRS:GINS2 EvolutionaryTrace:Q9Y248
GenomeRNAi:51659 NextBio:55634 Bgee:Q9Y248 CleanEx:HS_GINS2
Genevestigator:Q9Y248 GermOnline:ENSG00000131153 Uniprot:Q9Y248
Length = 185
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 85/172 (49%), Positives = 114/172 (66%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
MD AE+EF+AE + V IIP F+ L+ I+LI GD+GPF G+P +VPLWLAINLKQRQKCR
Sbjct: 1 MDAAEVEFLAEKELVTIIPNFS-LDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCR 59
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
L+ P WM+ F MPS +YME++ ++L+ +D+IP D IRTL+KD
Sbjct: 60 LLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLK 172
+WD RI+KLR S D+FV+ HA L++LT EIN+ L L+ M L+
Sbjct: 120 MWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171
>UNIPROTKB|Q7ZT46 [details] [associations]
symbol:gins2 "DNA replication complex GINS protein PSF2"
species:8355 "Xenopus laevis" [GO:0000811 "GINS complex"
evidence=IPI] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=IDA] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] InterPro:IPR007257
GO:GO:0003682 GO:GO:0006271 GO:GO:0032784 InterPro:IPR021151
Pfam:PF05916 GO:GO:0000811 KO:K10733 InterPro:IPR016906
PANTHER:PTHR12772 PIRSF:PIRSF028998 HOVERGEN:HBG044983
EMBL:AB097169 EMBL:BC073044 RefSeq:NP_001085627.1 UniGene:Xl.3786
ProteinModelPortal:Q7ZT46 SMR:Q7ZT46 GeneID:444053 KEGG:xla:444053
Xenbase:XB-GENE-6256252 Uniprot:Q7ZT46
Length = 185
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 83/172 (48%), Positives = 113/172 (65%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
MD +E+EF+AE + V +IP F+ L+ ++LI GD+GPF +P +VPLWLAINLKQRQKCR
Sbjct: 1 MDASEVEFLAEKEQVTVIPNFS-LDKVYLIGGDLGPFNPSLPVEVPLWLAINLKQRQKCR 59
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
+V P WM+ F MPS +YME++ ++L+ AD+IP D IRTL+KD
Sbjct: 60 IVPPEWMDVEKLEAIRDQERREETFTPMPSPYYMELTKLLLNHAADNIPKADEIRTLVKD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLK 172
WD RI+KLR S D+FVK HA L++LT EIN+I + L+ M L+
Sbjct: 120 TWDTRIAKLRLSADSFVKGQEAHAKLDNLTLMEINTIGTFFTESLNHMYKLR 171
>RGD|1311055 [details] [associations]
symbol:Gins2 "GINS complex subunit 2 (Psf2 homolog)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
InterPro:IPR007257 RGD:1311055 GO:GO:0005634 GO:GO:0006260
EMBL:CH473972 InterPro:IPR021151 Pfam:PF05916 KO:K10733 OMA:VGPFRAG
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
GeneTree:ENSGT00390000007838 CTD:51659 OrthoDB:EOG4WSWBN
IPI:IPI00189438 RefSeq:NP_001099660.1 UniGene:Rn.232068
Ensembl:ENSRNOT00000023709 GeneID:292058 KEGG:rno:292058
UCSC:RGD:1311055 NextBio:633673 Uniprot:D3ZSY6
Length = 185
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 85/172 (49%), Positives = 113/172 (65%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
MD AE+EF+AE + V IIP F+ L+ I+LI GD+GPF G+P VPLWLAINLKQRQKCR
Sbjct: 1 MDAAEVEFLAEKELVTIIPNFS-LDKIYLIGGDLGPFNPGLPVDVPLWLAINLKQRQKCR 59
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
L+ P WM+ F +PS HYME++ ++L+ +D+IP D IRTLIKD
Sbjct: 60 LLPPEWMDVEKLEQMRDEERKEETFTPVPSPHYMEITKLLLNHASDNIPKADTIRTLIKD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLK 172
+WD R++KLR S D+FV+ HA L++LT EIN+ L L+ M L+
Sbjct: 120 LWDTRMAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGAFLTQALNHMYKLR 171
>UNIPROTKB|E1BC42 [details] [associations]
symbol:GINS2 "DNA replication complex GINS protein PSF2"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR007257
GO:GO:0005634 GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916
KO:K10733 OMA:VGPFRAG InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838 CTD:51659
EMBL:DAAA02046208 EMBL:DAAA02046209 EMBL:DAAA02046210
IPI:IPI00692243 RefSeq:XP_002694797.1 Ensembl:ENSBTAT00000061540
GeneID:100299171 KEGG:bta:100299171 Uniprot:E1BC42
Length = 185
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 84/172 (48%), Positives = 113/172 (65%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
MD AE+EF+AE + V IIP F+ L+ I+LI GD+GPF G+P +VPLWLA+NLKQRQKCR
Sbjct: 1 MDAAEVEFLAEKELVTIIPNFS-LDKIYLIGGDLGPFNPGLPVQVPLWLAVNLKQRQKCR 59
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
L+ P WM+ F MPS +YME++ ++L+ +D+IP D IRTLIKD
Sbjct: 60 LLPPEWMDVEKLEKIRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLIKD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLK 172
+WD RI+K R S D+FV+ HA L++LT EIN+ L L+ M L+
Sbjct: 120 VWDTRIAKFRVSADSFVRQQEAHAKLDNLTLMEINTSGAFLTQALNHMYKLR 171
>UNIPROTKB|E2QU81 [details] [associations]
symbol:GINS2 "DNA replication complex GINS protein PSF2"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
InterPro:IPR007257 GO:GO:0005634 GO:GO:0006260 InterPro:IPR021151
Pfam:PF05916 KO:K10733 OMA:VGPFRAG InterPro:IPR016906
PANTHER:PTHR12772 PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838
CTD:51659 EMBL:AAEX03004003 EMBL:AAEX03004004 EMBL:AAEX03004005
RefSeq:XP_851786.1 Ensembl:ENSCAFT00000031699 GeneID:609436
KEGG:cfa:609436 NextBio:20895034 Uniprot:E2QU81
Length = 185
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 83/172 (48%), Positives = 115/172 (66%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
MD AE+EF+AE + V IIP F+ ++ ++LI GD+GPF G+P +VPLWLAINLKQRQKCR
Sbjct: 1 MDAAEVEFLAEKELVTIIPNFS-VDKMYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCR 59
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
L+ P WM+ F MPS +YME++ ++L+ +D+IP D IRTL+KD
Sbjct: 60 LIPPEWMDVEKLEKIRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLK 172
+WD RI+KLR S D+FV+ HA L++LT EI+S L + L+ M L+
Sbjct: 120 VWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEISSSGPFLTEALNHMYKLR 171
>MGI|MGI:1921019 [details] [associations]
symbol:Gins2 "GINS complex subunit 2 (Psf2 homolog)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR007257 MGI:MGI:1921019 GO:GO:0005634 GO:GO:0006260
InterPro:IPR021151 Pfam:PF05916 eggNOG:COG5093 HOGENOM:HOG000246603
KO:K10733 OMA:VGPFRAG InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838 CTD:51659
HOVERGEN:HBG044983 OrthoDB:EOG4WSWBN EMBL:AK014776 EMBL:AK028375
EMBL:AK030758 EMBL:BC082565 IPI:IPI00108254 RefSeq:NP_849187.1
UniGene:Mm.275910 ProteinModelPortal:Q9D600 SMR:Q9D600
STRING:Q9D600 PhosphoSite:Q9D600 PaxDb:Q9D600 PRIDE:Q9D600
Ensembl:ENSMUST00000034278 GeneID:272551 KEGG:mmu:272551
UCSC:uc009nrd.1 InParanoid:Q9D600 NextBio:393602 Bgee:Q9D600
CleanEx:MM_GINS2 Genevestigator:Q9D600
GermOnline:ENSMUSG00000031821 Uniprot:Q9D600
Length = 185
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 85/172 (49%), Positives = 113/172 (65%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
MD AE+EF+AE + V IIP F+ L+ I+LI GD+GPF G+P VPLWLAINLKQRQKCR
Sbjct: 1 MDAAEVEFLAEKELVTIIPNFS-LDKIYLIGGDLGPFNPGLPVDVPLWLAINLKQRQKCR 59
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
L+ P WM+ F +PS HYME++ ++L+ +D+IP D IRTLIKD
Sbjct: 60 LLPPEWMDVEKLEQMRDEERKEETFTPVPSPHYMEITKLLLNHASDNIPKADTIRTLIKD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLK 172
+WD R++KLR S D+FV+ HA L++LT EI+S L L+ M L+
Sbjct: 120 LWDTRMAKLRVSADSFVRQQEAHAKLDNLTLMEISSSGAFLTQALNHMYKLR 171
>UNIPROTKB|F1S6I3 [details] [associations]
symbol:GINS2 "DNA replication complex GINS protein PSF2"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR007257
GO:GO:0005634 GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916
KO:K10733 OMA:VGPFRAG InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838 EMBL:FP102522
RefSeq:XP_003126865.1 UniGene:Ssc.70142 Ensembl:ENSSSCT00000002954
GeneID:100512784 KEGG:ssc:100512784 Uniprot:F1S6I3
Length = 185
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 82/172 (47%), Positives = 111/172 (64%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
MD AE+EF+AE + V IIP F+ L+ I+LI GD+GPF G+P +VPLWLAINLKQRQKCR
Sbjct: 1 MDAAEVEFLAEKELVTIIPNFS-LDKIYLIGGDLGPFNPGLPVQVPLWLAINLKQRQKCR 59
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
L+ P WM+ F P+ HY E++ ++L+ +D+IP D IRTLIKD
Sbjct: 60 LLAPEWMDVEKLEKMRDHERKEDTFTPAPNPHYTELTKLLLNHASDNIPKADEIRTLIKD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLK 172
+WD R++KLR S D+FV+ HA L++LT E+N+ L L M L+
Sbjct: 120 VWDTRVAKLRVSADSFVRQQEAHAKLDNLTLMEVNAGGAFLTRALSHMFKLR 171
>FB|FBgn0261976 [details] [associations]
symbol:Psf2 "Psf2" species:7227 "Drosophila melanogaster"
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000811 "GINS
complex" evidence=IDA] [GO:0043138 "3'-5' DNA helicase activity"
evidence=IDA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0046331 "lateral inhibition" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP]
InterPro:IPR007257 EMBL:AE014134 GO:GO:0022008 GO:GO:0046331
GO:GO:0045750 GO:GO:0006271 GO:GO:0032784 InterPro:IPR021151
Pfam:PF05916 GO:GO:0000811 eggNOG:COG5093 KO:K10733
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
GeneTree:ENSGT00390000007838 EMBL:AY071234 RefSeq:NP_608826.3
UniGene:Dm.23522 ProteinModelPortal:Q9VQY9 SMR:Q9VQY9 IntAct:Q9VQY9
MINT:MINT-806440 STRING:Q9VQY9 PaxDb:Q9VQY9 PRIDE:Q9VQY9
EnsemblMetazoa:FBtr0331449 EnsemblMetazoa:FBtr0331450 GeneID:33641
KEGG:dme:Dmel_CG18013 UCSC:CG18013-RA CTD:33641 FlyBase:FBgn0261976
InParanoid:Q9VQY9 OrthoDB:EOG4KH1B2 GenomeRNAi:33641 NextBio:784567
Bgee:Q9VQY9 GermOnline:CG18013 Uniprot:Q9VQY9
Length = 203
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 81/166 (48%), Positives = 112/166 (67%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
MDP+ IEFI E + IIP F++ L HLI G VGPFRAG P VPLW+A +L+++QKCR
Sbjct: 1 MDPSIIEFIGEKCMISIIPNFSNEPL-HLIYGPVGPFRAGFPVFVPLWMATHLRKQQKCR 59
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
+V P WM+ S+FF KMP +HYM ++ +++ DD+P + +RT+IKD
Sbjct: 60 IVPPEWMDMDILEEIKEEEKRSKFFTKMPCEHYMVVAQLVMSTAPDDVPRCEELRTVIKD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLD 166
I+D+R SKLR+SID F+K G +A L++LT EI+S+R IL LD
Sbjct: 120 IFDIRESKLRTSIDAFIKGEGTYAKLDNLTLLEIHSVRPILPYSLD 165
>WB|WBGene00009287 [details] [associations]
symbol:F31C3.5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR007257 GO:GO:0005634 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0002119 GO:GO:0006260
GO:GO:0010171 GO:GO:0040011 GO:GO:0040035 EMBL:Z92784 GO:GO:0001703
InterPro:IPR021151 Pfam:PF05916 eggNOG:COG5093 HOGENOM:HOG000246603
KO:K10733 OMA:VGPFRAG InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 PIR:T21590 RefSeq:NP_493627.1 UniGene:Cel.18820
ProteinModelPortal:O62193 SMR:O62193 IntAct:O62193 STRING:O62193
PaxDb:O62193 EnsemblMetazoa:F31C3.5 GeneID:185146
KEGG:cel:CELE_F31C3.5 UCSC:F31C3.5 CTD:185146 WormBase:F31C3.5
GeneTree:ENSGT00390000007838 InParanoid:O62193 NextBio:927198
Uniprot:O62193
Length = 180
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 60/162 (37%), Positives = 98/162 (60%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
M+ EFIA + +E+IP + IHLISGD+GPF AG+P ++P+W AI +K++ C+
Sbjct: 1 MNAERCEFIAGNSLIEVIPSISDDRPIHLISGDIGPFEAGVPCRIPVWTAILMKRKHNCK 60
Query: 61 LVLPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKD 120
+V P WM+ S+ K+P DH+ E+SH+++ +DI V+ +++L++D
Sbjct: 61 VVAPQWMDVDELKKILTSETESQGLAKLP-DHFFEISHMLVRDAREDIFEVEAVKSLVQD 119
Query: 121 IWDLRISKLRSSIDTFVKSGGG-HATLNHLTQFEINSIRNIL 161
I+D R +KLRSS F++ HA L+++ E +S R L
Sbjct: 120 IYDRRDAKLRSSAIEFLRQNQTCHAQLDNVQLIEASSARATL 161
>TAIR|locus:2101247 [details] [associations]
symbol:PSF2 "AT3G12530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006260 "DNA replication"
evidence=IEA] InterPro:IPR007257 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006260 EMBL:AP002047 EMBL:AC069474
EMBL:AP002055 InterPro:IPR021151 Pfam:PF05916 EMBL:BT010931
EMBL:BT020600 IPI:IPI00544971 RefSeq:NP_001030680.1
RefSeq:NP_187859.2 UniGene:At.39583 ProteinModelPortal:Q9C7A8
SMR:Q9C7A8 IntAct:Q9C7A8 STRING:Q9C7A8 PaxDb:Q9C7A8 PRIDE:Q9C7A8
DNASU:820432 EnsemblPlants:AT3G12530.1 GeneID:820432
KEGG:ath:AT3G12530 TAIR:At3g12530 eggNOG:COG5093
HOGENOM:HOG000246603 InParanoid:Q9C7A8 KO:K10733 OMA:VGPFRAG
PhylomeDB:Q9C7A8 ProtClustDB:CLSN2681358 Genevestigator:Q9C7A8
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
Uniprot:Q9C7A8
Length = 210
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 64/189 (33%), Positives = 106/189 (56%)
Query: 3 PAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCRLV 62
P E+EF+AED+ VEI+P N + ++ ISGD G F IP KVPLWLA+ LK+R KC
Sbjct: 14 PQEVEFMAEDELVEIVPNMN-MEQLNFISGDFGRFIPQIPTKVPLWLAVALKRRGKCTFR 72
Query: 63 LPTWMNXXXXXXXXXXXXXSRF-FIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKDI 121
P WM+ S+ F +P Y+E++ ++ D DDIP++ ++R+L++DI
Sbjct: 73 PPGWMSVDNLTQILEAERESQSTFQALPFS-YVEIARLLFDHARDDIPDMYMVRSLVEDI 131
Query: 122 WDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSLKDKQCDVDVT 181
D+R+ KL +++ +F G +++++ E+N +R + L+ + DVD
Sbjct: 132 RDVRLHKLETNLGSF--QGTSAVKISNVSAMEVNIVRPFVIRALEAFYKHDKPEADVDRD 189
Query: 182 LVTSNSQSQ 190
+S Q +
Sbjct: 190 TRSSRQQRE 198
>DICTYBASE|DDB_G0293564 [details] [associations]
symbol:gins2 "GINS complex subunit 2" species:44689
"Dictyostelium discoideum" [GO:0006260 "DNA replication"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0043138
"3'-5' DNA helicase activity" evidence=ISS] [GO:0000811 "GINS
complex" evidence=ISS] InterPro:IPR007257 dictyBase:DDB_G0293564
GenomeReviews:CM000155_GR GO:GO:0006260 EMBL:AAFI02000218
InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811 eggNOG:COG5093
KO:K10733 PANTHER:PTHR12772 RefSeq:XP_629010.1
ProteinModelPortal:Q54BL9 STRING:Q54BL9 EnsemblProtists:DDB0266354
GeneID:8629294 KEGG:ddi:DDB_G0293564 OMA:VEIVPNI
ProtClustDB:CLSZ2429234 Uniprot:Q54BL9
Length = 223
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 60/193 (31%), Positives = 103/193 (53%)
Query: 3 PAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCRLV 62
P++IEF+AED + ++P F +LI L SG+ GPF P ++PLWLAI+LK+++KC +
Sbjct: 8 PSQIEFLAEDTTITVVPNFKMESLIFL-SGEYGPFVPSFPIEIPLWLAISLKKKKKCTIT 66
Query: 63 LPTWMNXXXXXXXXXXXXXSRF-FIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKDI 121
P WM + FI++P +++ E+S ++L DDI +++ IR L DI
Sbjct: 67 PPDWMTYNKLKAKFQEENKIKDGFIELP-ENFDEISSLLLANCPDDIKDINKIRILKGDI 125
Query: 122 WDLRISKLRSSIDTFVKS---GGGHATLN--HLTQFEINSIRNILCDVLDTMSSLKDKQC 176
R KL S+ + + S G T+ + + EIN IR ++ ++ +++
Sbjct: 126 LSRREKKLEESLKSHLNSLTDGESVTTMEFKNFSMMEINKIRASYVSGINDLNKIQNSDN 185
Query: 177 DVDVTLVTSNSQS 189
D + +NS +
Sbjct: 186 DNNNNNNNNNSNN 198
>POMBASE|SPBC725.13c [details] [associations]
symbol:psf2 "GINS complex subunit Psf2" species:4896
"Schizosaccharomyces pombe" [GO:0000811 "GINS complex"
evidence=TAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IMP] [GO:0006270 "DNA replication initiation"
evidence=TAS] [GO:0031261 "DNA replication preinitiation complex"
evidence=IC] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0043596 "nuclear replication fork" evidence=IC]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR007257 PomBase:SPBC725.13c GO:GO:0005829 GO:GO:0034613
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006270 GO:GO:0043596
GO:GO:0045132 InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811
eggNOG:COG5093 HOGENOM:HOG000246603 KO:K10733 OMA:VGPFRAG
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998 PIR:T40665
RefSeq:NP_595493.1 ProteinModelPortal:O94329 STRING:O94329
EnsemblFungi:SPBC725.13c.1 GeneID:2541194 KEGG:spo:SPBC725.13c
OrthoDB:EOG4R274H NextBio:20802306 Uniprot:O94329
Length = 183
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 52/169 (30%), Positives = 92/169 (54%)
Query: 3 PAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCRLV 62
P E+EF+A ++ + I+P ++ + L+S + + +VPLWLA+ LK++ R+V
Sbjct: 13 PEEMEFLAGNEYINIVPS-ETMDQLPLVSATIPIMKPPKKCRVPLWLALELKKQNLARIV 71
Query: 63 LPTWMNXXXXXXXXXXXXXSRFFIKMPSDHYMEMSHIILDIGADDIPNVDLIRTLIKDIW 122
P WM + F ++P ++E +H++L+ ADDI +V+ IR ++ DI
Sbjct: 72 PPEWMEIGKLENIRDDELENETFSELPF-RWLETAHLLLNFCADDIEDVEDIRRILLDIR 130
Query: 123 DLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCDVLDTMSSL 171
+ R SK R+ ++ + TL++L EIN IR I +V+D M +
Sbjct: 131 EARQSKARTGLEAINEV---QLTLDNLGAMEINEIRPIFREVMDRMRKI 176
>UNIPROTKB|G4NG20 [details] [associations]
symbol:MGG_01917 "DNA replication complex GINS protein
PSF2" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007257 GO:GO:0005634
GO:GO:0006260 EMBL:CM001236 InterPro:IPR021151 Pfam:PF05916
KO:K10733 InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
RefSeq:XP_003719344.1 ProteinModelPortal:G4NG20
EnsemblFungi:MGG_01917T0 GeneID:2681132 KEGG:mgr:MGG_01917
Uniprot:G4NG20
Length = 247
Score = 123 (48.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 1 MDPAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCR 60
+ P+EI F+ E++ V I+P+ L I L+ G R A +PLWLA+ LK++++
Sbjct: 9 LTPSEIAFLCENELVTIVPR-QRLESIPLLQGPTPTLRPPHRATLPLWLALLLKKQRRAN 67
Query: 61 LVLPTWMN 68
++ P WM+
Sbjct: 68 IIAPPWMH 75
Score = 100 (40.3 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 92 HYMEMSHIILDIGADDIP-NVDLIRTLIKDIWDLRISKLRSSIDTFVKSGGGHATLNHLT 150
H++EM+ I+L DD+P + +R LI+D+ ++R +K+R+S GGG +L +
Sbjct: 141 HWLEMAEILLAHAPDDMPASAGEVRGLIRDLVEVRAAKMRASSADVEGFGGGVMSLRGVG 200
Query: 151 QFEINSIRNILCDVLDTMSSL 171
E+ R + V+D + L
Sbjct: 201 GAELAENRGFVLGVVDGVRKL 221
>ASPGD|ASPL0000004061 [details] [associations]
symbol:AN5901 species:162425 "Emericella nidulans"
[GO:0031298 "replication fork protection complex" evidence=IEA]
[GO:0000811 "GINS complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000727 "double-strand break
repair via break-induced replication" evidence=IEA] [GO:0006261
"DNA-dependent DNA replication" evidence=IEA] InterPro:IPR007257
GO:GO:0005634 GO:GO:0007059 GO:GO:0006260 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR021151 Pfam:PF05916 KO:K10733
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
RefSeq:XP_663505.1 ProteinModelPortal:Q5B0M9 GeneID:2870816
KEGG:ani:AN5901.2 eggNOG:NOG137511 HOGENOM:HOG000163760
OrthoDB:EOG479JH4 Uniprot:Q5B0M9
Length = 272
Score = 118 (46.6 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 3 PAEIEFIAEDQNVEIIPKFNHLNLIHLISGDVGPFRAGIPAKVPLWLAINLKQRQKCRLV 62
P EI F+AE + V I+P+ L + L+ G V P VPLWLA+ LK++++ ++
Sbjct: 11 PPEISFLAEMELVTIVPR-QRLEGLELLGGPVAPLIPPRRTNVPLWLALLLKRQRRANIL 69
Query: 63 LPTWMN 68
P W++
Sbjct: 70 PPPWLH 75
Score = 107 (42.7 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 92 HYMEMSHIILDIGADDIPNVDLIRTLIKDIWDLRISKLRSSIDTFVKSGG--GHATLNHL 149
H++E+ ++LD ADD+ + D R L+K++ ++R +K+RS ++ + G G L +
Sbjct: 159 HWLEVGTMLLDAAADDLVDPDQTRRLLKELREVRSAKIRSGVEVLDDAAGPGGGVALTGV 218
Query: 150 TQFEINSIRNILCDVLD 166
EI R + V+D
Sbjct: 219 GAMEIGEGRGFISGVVD 235
>SGD|S000003608 [details] [associations]
symbol:PSF2 "Subunit of the GINS complex" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IGI;IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0000811 "GINS
complex" evidence=IPI] [GO:0031298 "replication fork protection
complex" evidence=IDA] [GO:0000727 "double-strand break repair via
break-induced replication" evidence=IMP] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0031261 "DNA replication preinitiation complex"
evidence=IPI] InterPro:IPR007257 SGD:S000003608 EMBL:BK006943
GO:GO:0006261 EMBL:X88851 GO:GO:0031298 GO:GO:0000727 EMBL:Z34288
InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811 eggNOG:COG5093
HOGENOM:HOG000246603 KO:K10733 InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838 OrthoDB:EOG4R274H
EMBL:Z49347 EMBL:AY558248 PIR:S50799 RefSeq:NP_012463.1
ProteinModelPortal:P40359 SMR:P40359 DIP:DIP-3858N IntAct:P40359
MINT:MINT-550028 STRING:P40359 EnsemblFungi:YJL072C GeneID:853373
KEGG:sce:YJL072C CYGD:YJL072c OMA:MEINEMR NextBio:973816
Genevestigator:P40359 GermOnline:YJL072C Uniprot:P40359
Length = 213
Score = 131 (51.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 45/188 (23%), Positives = 88/188 (46%)
Query: 3 PAEIEFIAEDQNVEIIPKF--------------NHLNLIHLISGD---VGPFRAGIPAKV 45
P EI+FI E++ ++I P+ NH LI+ D + A +V
Sbjct: 13 PEEIQFIVENEPIKIFPRITTRQKIRGDDRGTGNHTRW-QLITTDDKALNNMVAMRSTEV 71
Query: 46 PLWLAINLKQRQKCRLVLPTWMNXXXXXXXXXXXXXSRF-FIKMPSDHYMEMSHIILDIG 104
LW+A+ LKQ+ KC +V P W+ F ++P + ++ ++ I+ +
Sbjct: 72 VLWIALLLKQQSKCSIVAPQWLTTKELDRKIQYEKTHPDRFSELPWN-WLVLARILFNKA 130
Query: 105 ADDIPN-VDLIRTLIKDIWDLRISKLRSSIDTFVKSGGGHATLNHLTQFEINSIRNILCD 163
DD + + +R I+D+ ++R K+ + +S H L++L+ EIN +R + +
Sbjct: 131 KDDFHDPIHELRGKIQDLREIRQIKVLKGLKYLNES---HLQLDNLSLLEINELRPFITE 187
Query: 164 VLDTMSSL 171
++D + +
Sbjct: 188 IMDKLREI 195
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 177 0.00084 109 3 11 22 0.38 32
31 0.50 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 601 (64 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.45u 0.08s 14.53t Elapsed: 00:00:12
Total cpu time: 14.46u 0.08s 14.54t Elapsed: 00:00:12
Start: Thu Aug 15 13:52:04 2013 End: Thu Aug 15 13:52:16 2013