Query psy6471
Match_columns 635
No_of_seqs 274 out of 1590
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 19:00:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6471hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1sjj_A Actinin; 3-helix bundle 100.0 9E-58 3.1E-62 538.6 42.6 527 12-614 125-708 (863)
2 1hci_A Alpha-actinin 2; triple 100.0 3E-46 1E-50 411.7 42.9 443 94-616 6-471 (476)
3 1u4q_A Spectrin alpha chain, b 100.0 8.5E-37 2.9E-41 318.9 41.0 312 220-617 6-321 (322)
4 3edv_A Spectrin beta chain, br 100.0 9.3E-35 3.2E-39 303.7 43.5 312 216-614 6-322 (323)
5 2odv_A Plectin 1, HD1; plakin 100.0 3.2E-36 1.1E-40 294.7 27.2 221 93-317 5-225 (235)
6 3kbt_A Beta-I spectrin, spectr 100.0 1.8E-34 6.2E-39 301.9 34.5 315 219-619 6-325 (326)
7 3r6n_A Desmoplakin; spectrin r 100.0 6E-31 2.1E-35 281.5 28.7 210 351-635 7-217 (450)
8 3r6n_A Desmoplakin; spectrin r 100.0 5.3E-29 1.8E-33 266.5 34.7 314 223-634 8-388 (450)
9 1u4q_A Spectrin alpha chain, b 100.0 2.1E-28 7.2E-33 255.3 34.6 313 100-502 4-320 (322)
10 1hci_A Alpha-actinin 2; triple 100.0 2.3E-28 7.8E-33 268.9 33.9 342 211-635 5-385 (476)
11 3pdy_A Plectin; cytoskeleton, 100.0 1.8E-28 6E-33 239.4 25.9 200 351-616 10-210 (210)
12 3kbt_A Beta-I spectrin, spectr 100.0 7.2E-28 2.5E-32 251.7 30.1 316 100-504 5-324 (326)
13 3edv_A Spectrin beta chain, br 100.0 2.2E-27 7.6E-32 247.7 33.5 311 100-500 7-322 (323)
14 1u5p_A Spectrin alpha chain, b 100.0 9.8E-27 3.4E-31 228.4 29.5 209 347-617 4-215 (216)
15 1cun_A Protein (alpha spectrin 100.0 3.4E-26 1.2E-30 223.9 30.6 208 348-617 2-212 (213)
16 2iak_A Bullous pemphigoid anti 100.0 1.9E-27 6.3E-32 234.8 20.2 203 347-615 21-224 (224)
17 1s35_A Beta-I spectrin, spectr 100.0 5.4E-26 1.8E-30 222.8 29.8 208 349-617 3-213 (214)
18 1g8x_A Myosin II heavy chain f 99.9 1.1E-26 3.6E-31 271.1 22.1 222 101-323 768-994 (1010)
19 1sjj_A Actinin; 3-helix bundle 99.9 1.5E-25 5.1E-30 264.0 28.7 340 215-635 248-624 (863)
20 3edu_A Beta-I spectrin, spectr 99.9 5.2E-25 1.8E-29 216.5 21.8 211 348-620 3-217 (218)
21 1quu_A Human skeletal muscle a 99.9 7.5E-24 2.5E-28 212.7 23.5 233 207-505 4-244 (250)
22 1u5p_A Spectrin alpha chain, b 99.9 2.1E-23 7.1E-28 204.6 25.7 208 220-503 6-215 (216)
23 3fb2_A Spectrin alpha chain, b 99.9 1.6E-23 5.5E-28 205.8 23.7 202 347-610 14-218 (218)
24 1cun_A Protein (alpha spectrin 99.9 3.7E-22 1.3E-26 195.2 26.7 207 220-502 3-211 (213)
25 3edu_A Beta-I spectrin, spectr 99.9 1E-22 3.5E-27 200.0 20.7 209 220-504 4-215 (218)
26 1quu_A Human skeletal muscle a 99.9 6.2E-22 2.1E-26 198.7 23.8 212 348-621 16-246 (250)
27 1s35_A Beta-I spectrin, spectr 99.9 1.3E-21 4.6E-26 191.4 22.6 209 219-503 2-213 (214)
28 2ycu_A Non muscle myosin 2C, a 99.9 8E-26 2.7E-30 264.2 -10.4 217 101-318 760-981 (995)
29 2iak_A Bullous pemphigoid anti 99.9 2.9E-22 1E-26 197.5 7.7 200 219-500 22-223 (224)
30 3lbx_A Spectrin alpha chain, e 99.8 2.2E-20 7.6E-25 173.7 15.5 133 474-617 26-161 (161)
31 3f31_A Spectrin alpha chain, b 99.8 4.1E-20 1.4E-24 169.8 15.1 131 473-614 15-148 (149)
32 3pdy_A Plectin; cytoskeleton, 99.8 1.2E-19 4E-24 176.9 19.1 197 222-500 10-208 (210)
33 3pe0_A Plectin; cytoskeleton, 99.8 6.4E-20 2.2E-24 186.0 17.7 124 501-634 8-131 (283)
34 3fb2_A Spectrin alpha chain, b 99.8 5.3E-19 1.8E-23 173.5 21.2 201 220-496 16-218 (218)
35 3pe0_A Plectin; cytoskeleton, 99.8 7.4E-19 2.5E-23 178.2 19.0 155 211-390 3-161 (283)
36 1bkr_A Spectrin beta chain; fi 99.8 4.1E-21 1.4E-25 165.3 -1.7 73 14-86 9-109 (109)
37 3lbx_B Beta-I spectrin, spectr 99.8 8.7E-18 3E-22 160.3 20.8 166 347-574 5-173 (185)
38 3lbx_B Beta-I spectrin, spectr 99.8 3.3E-17 1.1E-21 156.3 20.8 148 220-391 7-155 (185)
39 1wyq_A Spectrin beta chain, br 99.8 3.4E-20 1.1E-24 163.8 -1.1 75 14-88 13-115 (127)
40 1bhd_A Utrophin; calponin homo 99.8 9.6E-21 3.3E-25 165.3 -5.5 76 14-89 14-117 (118)
41 1wyl_A NEDD9 interacting prote 99.7 5.8E-20 2E-24 160.0 -3.0 74 14-88 13-114 (116)
42 2d88_A Protein mical-3; all al 99.7 9.3E-20 3.2E-24 159.7 -3.0 75 14-88 15-118 (121)
43 2d89_A EHBP1 protein; all alph 99.7 1.1E-19 3.9E-24 158.9 -3.0 76 14-89 15-118 (119)
44 2d87_A Smoothelin splice isofo 99.7 1.1E-18 3.7E-23 154.2 -1.4 73 14-86 13-114 (128)
45 2spc_A Spectrin; cytoskeleton; 99.6 1.8E-16 6.1E-21 137.0 7.6 102 503-614 5-106 (107)
46 3uul_A Utrophin; spectrin repe 99.6 8.8E-15 3E-19 128.6 17.4 108 503-619 4-114 (118)
47 3lbx_A Spectrin alpha chain, e 99.6 2.6E-15 8.7E-20 139.5 14.3 126 182-317 29-155 (161)
48 3uun_A Dystrophin; triple heli 99.6 6.4E-15 2.2E-19 129.6 15.8 111 502-621 3-116 (119)
49 1g8x_A Myosin II heavy chain f 99.6 3.8E-15 1.3E-19 174.1 17.2 222 347-626 767-1003(1010)
50 3f31_A Spectrin alpha chain, b 99.6 6.8E-15 2.3E-19 134.9 10.5 126 182-317 19-145 (149)
51 3f7p_A Plectin-1; plakin, hemi 99.5 6.5E-16 2.2E-20 156.0 -2.8 74 14-87 195-296 (296)
52 2spc_A Spectrin; cytoskeleton; 99.5 6E-14 2.1E-18 121.0 8.6 97 220-317 6-103 (107)
53 1wku_A Alpha-actinin 3; calpon 99.4 3E-15 1E-19 149.2 -4.1 75 14-88 146-249 (254)
54 2ycu_A Non muscle myosin 2C, a 99.4 2.6E-14 8.8E-19 167.3 -0.6 218 349-624 761-993 (995)
55 1dxx_A Dystrophin; structural 99.4 1.1E-14 3.9E-19 144.6 -4.0 76 14-89 141-245 (246)
56 2odv_A Plectin 1, HD1; plakin 99.4 4.6E-11 1.6E-15 116.7 21.1 201 349-611 14-225 (235)
57 4b7l_A Filamin-B; structural p 99.4 5.4E-14 1.8E-18 146.2 -0.6 72 13-87 145-245 (347)
58 1sh5_A Plectin 1, PLTN, PCN; a 99.3 2E-14 6.7E-19 143.0 -4.4 76 14-89 139-242 (245)
59 3hoc_A Filamin-A; calponin hom 99.3 1.8E-13 6.1E-18 136.8 -1.9 66 14-82 176-270 (272)
60 3uul_A Utrophin; spectrin repe 99.2 2E-10 6.8E-15 100.5 15.9 112 347-507 3-116 (118)
61 3uun_A Dystrophin; triple heli 99.2 1.1E-10 3.7E-15 102.3 12.9 97 220-317 5-106 (119)
62 2wa7_A Filamin-B; disease muta 99.2 1.3E-12 4.5E-17 129.5 -1.9 67 13-82 148-243 (245)
63 1rt8_A Fimbrin; filamentous ac 98.9 1E-10 3.5E-15 128.5 -0.7 102 14-118 167-297 (513)
64 1rt8_A Fimbrin; filamentous ac 98.8 2.6E-10 8.7E-15 125.3 -3.0 68 13-82 413-513 (513)
65 1pxy_A Fimbrin-like protein; c 98.7 3E-10 1E-14 124.6 -4.5 70 14-85 403-505 (506)
66 1pxy_A Fimbrin-like protein; c 98.6 2.1E-09 7.3E-14 117.9 -2.4 102 14-118 158-288 (506)
67 1aoa_A T-fimbrin; actin-bindin 98.6 2.6E-09 9E-14 107.7 -2.7 64 14-81 174-275 (275)
68 1wjo_A T-plastin; CH domain, a 98.5 2.5E-09 8.6E-14 92.7 -4.5 72 14-87 13-118 (124)
69 1wlx_A Alpha-actinin 4; three- 98.4 2.9E-06 9.8E-11 73.5 12.5 117 95-212 8-128 (129)
70 1wlx_A Alpha-actinin 4; three- 98.4 5.9E-06 2E-10 71.6 13.7 110 495-616 6-124 (129)
71 3t98_B Nucleoporin NUP58/NUP45 35.9 1.7E+02 0.0057 23.4 9.0 29 216-244 11-39 (93)
72 1pzq_A Erythronolide synthase; 22.5 1.9E+02 0.0065 19.7 5.4 34 272-307 13-46 (60)
73 3tnu_B Keratin, type II cytosk 21.2 3.7E+02 0.013 22.6 8.8 16 511-526 7-22 (129)
74 2yy0_A C-MYC-binding protein; 20.8 1.9E+02 0.0066 20.4 5.1 34 466-499 15-49 (53)
No 1
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=100.00 E-value=9e-58 Score=538.64 Aligned_cols=527 Identities=18% Similarity=0.282 Sum_probs=440.0
Q ss_pred cccccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCcc------CCCC--------CCCcccc-
Q psy6471 12 YGLIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNPS------FSLT--------NVKWNDV- 62 (635)
Q Consensus 12 ~~~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~~------~~~~--------~l~~ed~- 62 (635)
--|.||+.+|+||+||+|+|| +||+||+| ||+.+.+.++. |++| +|+|+||
T Consensus 125 ~ll~W~~~~~~~~~~~~v~nf~~s~~dg~~~~~li~~~~p~~~~~~~~~~~~~~~n~~~a~~~a~~~lg~~~~l~~ed~~ 204 (863)
T 1sjj_A 125 GLLLWYQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIV 204 (863)
T ss_dssp TTHHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHTTCCSSSCSGGGGSCCCGGGCTHHHHHHHHHHCCCCSCCHHHHT
T ss_pred HHHHHHHHhccCCCCCCCCCCccccccHHHHHHHHHHhCCCCcChhhCCCCCHHHHHHHHHHHHHHhCCCCCccCHHHHh
Confidence 347899999999999999999 99999999 77877766543 3222 4999996
Q ss_pred CCCCCCcchhHhhhhhhhccCCCCCC-------CCCcc--chhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHH
Q psy6471 63 DTHEIDEKSIITYISSLYDVFPEPPA-------VHPLY--DSESQQRVNEYCDLASSLHLWMREKTAYMQDRNFPSTLIE 133 (635)
Q Consensus 63 ~~~~pd~~sv~tyv~~~~~~~~~~~~-------~~~~~--~~e~~~~~~~y~~~~~~Ll~WI~~~~~~l~~~~~~~sl~~ 133 (635)
.++.||++||||||++||++|++.+. +++++ .+|++.+.++|+..+++++.||.+++..+.+++||+++.+
T Consensus 205 ~~~~pd~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~y~~~~~el~~Wi~~~~~~l~~~~~~~~l~~ 284 (863)
T 1sjj_A 205 GTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMQA 284 (863)
T ss_dssp TCSSCCHHHHHHHHHHTTTTTCCCSCSTTCCTTCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHGGGSSCCCCCSSHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCHHH
Confidence 67899999999999999999998765 23333 4688999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccCCChhHHHHHHHHHHHHHHHHHHHhcCCCc-CCC-CCChHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy6471 134 MKKLAADSARFRTEEVPPRQRDKQRLQHIFQDLTKYFEDVGEVD-IDP-ELHIDVIERNWSRLLAAHQEKDSILQDEIKR 211 (635)
Q Consensus 134 vq~~l~~~~~f~~~E~~~~~~ek~~le~l~~~l~~~~~~~~~~~-~~~-~~~~~~i~~~W~~L~~~~~~r~~~L~~el~r 211 (635)
++.++.+|..|+..++||++.+++.++++++.+++.+...+++. .|+ +..+.+|+.+|..|..+..+|+.+|..++.|
T Consensus 285 v~~~l~~~~~~~~~~k~~~~~e~~~le~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~w~~L~~~~~~r~~~l~~~~~R 364 (863)
T 1sjj_A 285 MQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRR 364 (863)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHHHHTTTHHHHHTTTTSSCCCCCSTTSCGGGHHHHHHHHHHHHTTTHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887777643 454 6899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy6471 212 LDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQ 290 (635)
Q Consensus 212 le~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~ 290 (635)
+++|++++.+|.+++..+..||.+++..+.++++|..++..|+. +++|++|+++|.+++++|..|...|+.|+..+|++
T Consensus 365 ~~~Le~l~~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~~~~ 444 (863)
T 1sjj_A 365 LERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYD 444 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999999999999999999999999999998888557888887 89999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhh
Q psy6471 291 ASDLHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVD-TNTHFRALQEAIEWVKNKLAQI 369 (635)
Q Consensus 291 ~~~I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~-~~~f~~~~~e~~~Wl~e~~~~l 369 (635)
++.|..+++.|..+|+.|...+..|+. .|+++....+. +-+ ..+|+++++++.+||.+++..+
T Consensus 445 ~~~I~~~~~~l~~~W~~L~~~~~~R~~---------------~L~~~l~~~q~-~~~l~~~f~~~a~~~~~Wl~~~e~~l 508 (863)
T 1sjj_A 445 SPSVNARCQKICDQWDNLGALTQKRRE---------------ALERTEKLLET-IDQLYLEYAKRAAPFNNWMEGAMEDL 508 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHH-HHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999964 45555322211 001 2279999999999999999999
Q ss_pred hhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHH
Q psy6471 370 QEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNA 449 (635)
Q Consensus 370 ~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~ 449 (635)
.+.++|+|+.+|+.++++|..+ ..++..+...+..+.
T Consensus 509 ~~~~~g~dl~~ve~ll~kh~~~-----------------------------~~~l~~~~~~~~~~~-------------- 545 (863)
T 1sjj_A 509 QDTFIVHTIEEIQGLTTAHEQF-----------------------------KATLPDADKERQAIL-------------- 545 (863)
T ss_dssp HCCCCCSSSGGGHHHHHHHHHH-----------------------------HTTHHHHHHHHHHHH--------------
T ss_pred cchHhhccHHHHHHHHHHHHHH-----------------------------HhHHHHHHHHHHHHH--------------
Confidence 9999999999999998888642 333333433333221
Q ss_pred HHHHHHHHHHHhhhcCC----CCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH----------HHHHHHHHHHH
Q psy6471 450 IRKALNEDADKLLEEGD----PSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNAT----------KLFTEKASNLQ 514 (635)
Q Consensus 450 ~~~~L~~~a~~l~~~~~----~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L----------~~F~~~~~e~~ 514 (635)
.+......+.+.+. ...+ .+..++..|..+|+.|+.++. |+.+|++++ ++|.++++++.
T Consensus 546 ---~l~~~l~~~~~~~~~~~~~~~~---~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~F~~~a~~~~ 619 (863)
T 1sjj_A 546 ---GIHNEVSKIVQTYHVNMAGTNP---YTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIG 619 (863)
T ss_dssp ---HHHHHHHHHHHTTTCCCCSCCS---SSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhcccccCCCC---CCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 11112222221111 1111 134567899999999999999 999998733 67789999999
Q ss_pred HhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q psy6471 515 SKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHPAAKCIEAYMAA 594 (635)
Q Consensus 515 ~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~~~~I~~~l~~ 594 (635)
.||.+++..+.+.++ | ...+++.++++|++|+. +|.++...+..+...++.|...++++.+.+...++.
T Consensus 620 ~Wi~e~e~~l~~~~~---~-~~~~le~~l~~~~~~~~-------el~~~~~~i~~l~~l~~~L~~~~~~~~~~~~~s~e~ 688 (863)
T 1sjj_A 620 PWIQTKMEEIGRISI---E-MHGTLEDQLNHLRQYEK-------SIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEH 688 (863)
T ss_dssp HHHHHHHHHTTSCTT---C-TTTSSHHHHHHHHHHHH-------HHHTTGGGHHHHHHHHHHHHTTTCCCCTTCSSTTHH
T ss_pred HHHHHHHHHHHhhcc---C-CCCCHHHHHHHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHhcCCCCCcccccHHH
Confidence 999999999998652 3 12456678899999988 999999999999999999999988777777788999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy6471 595 MQSQWAWLLQLALCLETHLK 614 (635)
Q Consensus 595 L~~~W~~L~~~~~~R~~~L~ 614 (635)
+...|..+...+..+...++
T Consensus 689 l~i~~~eF~~~~~~~~~~~e 708 (863)
T 1sjj_A 689 IRVGWEQLLTTIARTINEVE 708 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 99999999888877765444
No 2
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=100.00 E-value=3e-46 Score=411.65 Aligned_cols=443 Identities=18% Similarity=0.301 Sum_probs=377.4
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHHHHHhc
Q psy6471 94 DSESQQRVNEYCDLASSLHLWMREKTAYMQDRNFPSTLIEMKKLAADSARFRTEEVPPRQRDKQRLQHIFQDLTKYFEDV 173 (635)
Q Consensus 94 ~~e~~~~~~~y~~~~~~Ll~WI~~~~~~l~~~~~~~sl~~vq~~l~~~~~f~~~E~~~~~~ek~~le~l~~~l~~~~~~~ 173 (635)
.+|++.+..+|.+.+++|+.||.+++..+++++||+++.+++.++..|+.|++.++||++.+++.+++.++.+.+++...
T Consensus 6 ~~e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~~l~~~~~~l~~f~~~~~~~~p~~~~ek~~le~~~~~~~~~l~~~ 85 (476)
T 1hci_A 6 NQENERLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRIS 85 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCCCCSSSTTTTHHHHHHHHHHHHTHHHHHHHHHHTTTHHHHTTTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999888777
Q ss_pred CCC-cCCC-CCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhh-cccCC
Q psy6471 174 GEV-DIDP-ELHIDVIERNWSRLLAAHQEKDSILQDEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEAR-RLDRL 250 (635)
Q Consensus 174 ~~~-~~~~-~~~~~~i~~~W~~L~~~~~~r~~~L~~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~-g~~~l 250 (635)
+++ +.|| +..+.+|+..|..|..+...|+.+|..++.|+++|++++.+|.+++..+.+||.+++..++++++ | .++
T Consensus 86 ~~~~~~~~~~~~~~~i~~~w~~L~~l~~~r~~~l~~~~~R~~~Le~~~~~f~~~~~~~~~Wl~e~e~~l~~~~~~g-~dl 164 (476)
T 1hci_A 86 NRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYES-ASL 164 (476)
T ss_dssp TSCCCCCCGGGCSSSHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCCGGGS-CCH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccC-CCH
Confidence 764 3455 68999999999999999999999999999999999999999999999999999999999988888 6 478
Q ss_pred chhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHHHHHHHhcccCccccCCccchh
Q psy6471 251 HPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVE 329 (635)
Q Consensus 251 ~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~ 329 (635)
..|+. +++|++|+++|.+++++|..|...|+.|+..+|++++.|..++..|+.+|+.|...+..|+.
T Consensus 165 ~~v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~------------ 232 (476)
T 1hci_A 165 TEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRRE------------ 232 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 88887 89999999999999999999999999999999999999999999999999999999999964
Q ss_pred hhhhhhhhhHhhhhhhhhh-hHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChh
Q psy6471 330 ERTVTRQTRTVMETRLVDT-NTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQ 408 (635)
Q Consensus 330 ~~~~L~~~~~~le~~~~~~-~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~ 408 (635)
.|+++...... +..+ .+|..++.++.+||.+++..+.+.++|+|+++|+.++++|..+
T Consensus 233 ---~L~~~~~~~~~-~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~----------------- 291 (476)
T 1hci_A 233 ---ALERMEKLLET-IDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQF----------------- 291 (476)
T ss_dssp ---HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHH-----------------
T ss_pred ---HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHH-----------------
Confidence 44444221100 0011 1699999999999999999999999999999999988888642
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCC----CChHHHHHHHHHHHHHH
Q psy6471 409 GVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDP----SDPQLRRLRREMDEVNR 484 (635)
Q Consensus 409 ~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~----~~~~~~~I~~~~~~L~~ 484 (635)
..++..+...+.. +..|...+..|+..+++ ..+ .|..++..|..
T Consensus 292 ------------~~~l~~~~~~~~~-----------------~~~l~~~~~~l~~~~~~~~~~~~~---~i~~~~~~L~~ 339 (476)
T 1hci_A 292 ------------KATLPEADGERQS-----------------IMAIQNEVEKVIQSYNIRISSSNP---YSTVTMDELRT 339 (476)
T ss_dssp ------------HHHHHHHHHHHHH-----------------HHHHHHHHHHHHHTTTCCSCSCCT---TCSSCHHHHHH
T ss_pred ------------HHHHHHHHHHHHH-----------------HHHHHHHHHHHHHhcCCCcCCCCc---chhccHHHHHH
Confidence 3333334433322 12334455566655443 222 26788999999
Q ss_pred HHHHHHHHHH-HHHHHHHHH----------HHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHH
Q psy6471 485 LFDEFERRAR-AEEDMKNAT----------KLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTL 553 (635)
Q Consensus 485 ~~~~L~~~~~-R~~~Le~~L----------~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~ 553 (635)
+|+.|..++. |+..|+.++ ++|..+++++..||.+++..+.+.+ .|. .++++.++++|+.|+.
T Consensus 340 ~w~~L~~~~~~R~~~L~~~l~~~~~~~~L~~~F~~~a~~~~~Wl~e~e~~l~~~~---~~~-~~~le~~l~~~~~~~~-- 413 (476)
T 1hci_A 340 KWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSS---IQI-TGALEDQMNQLKQYEH-- 413 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS---CTT-TTSTHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cCC-CCCHHHHHHHHHHHHH--
Confidence 9999999999 999998764 4899999999999999999999754 343 5677888999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhc---CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 554 KNLMSDLEKREIQFSAVQDRGEALILQ---HHPAAKCIEAYMAAMQSQWAWLLQLALCLETHLKHA 616 (635)
Q Consensus 554 ~~l~~el~~~~~~~~~v~~~g~~L~~~---~h~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a 616 (635)
+|..+.+.+..+...|+.+... +||.+. ..++.|+.+|+.|.+++..|...|+..
T Consensus 414 -----el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~---~~~~~l~~~W~~L~~~~~~~~~~lE~~ 471 (476)
T 1hci_A 414 -----NIINYKNNIDKLEGDHQLIQEALVFDNKHTN---YTMEHIRVGWELLLTTIARTINEVETQ 471 (476)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHhhHHHHHHHHHHHHHhcccCCCcch---hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887653 344433 688899999999999999999999864
No 3
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=100.00 E-value=8.5e-37 Score=318.91 Aligned_cols=312 Identities=18% Similarity=0.292 Sum_probs=276.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHH
Q psy6471 220 EKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRV 298 (635)
Q Consensus 220 ~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~ 298 (635)
..|++.+..+..||.+++..+.+.++|. ++..|+. +++|+.|+.+|.+++++|..+...|+.|...+|++++.|..++
T Consensus 6 ~~F~~~~~~l~~Wl~~~e~~l~~~~~g~-dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~ 84 (322)
T 1u4q_A 6 QNFNTGIKDFDFWLSEVEALLASEDYGK-DLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKR 84 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCS-SHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHHHHHH
Confidence 7899999999999999999999888884 7888887 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCCh
Q psy6471 299 QKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDL 378 (635)
Q Consensus 299 ~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl 378 (635)
..|+.+|..|...+..|+. .|+++. .+++|+++++++..||.+++..+.+.++|+|+
T Consensus 85 ~~l~~~w~~L~~~~~~R~~---------------~Le~~~--------~l~~f~~~~~~~~~Wl~e~e~~~~~~~~g~dl 141 (322)
T 1u4q_A 85 ETINGRFQRIKSMAAARRA---------------KLNESH--------RLHQFFRDMDDEESWIKEKKLLVSSEDYGRDL 141 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHhccCCCcCCCH
Confidence 9999999999999999963 455542 46889999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q psy6471 379 QGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDA 458 (635)
Q Consensus 379 ~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a 458 (635)
++|+.++++|+.+ ..+|...... +..+...+
T Consensus 142 ~~v~~ll~~h~~l-----------------------------~~el~~~~~~--------------------i~~l~~~g 172 (322)
T 1u4q_A 142 TGVQNLRKKHKRL-----------------------------EAELAAHEPA--------------------IQGVLDTG 172 (322)
T ss_dssp HHHHHHHHHHHHH-----------------------------HHHHHHHHHH--------------------HHHHHHHH
T ss_pred HHHHHHHHHHHHH-----------------------------HHHHHHHHHH--------------------HHHHHHHH
Confidence 9999998888742 2333333322 24455566
Q ss_pred HHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCC
Q psy6471 459 DKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--TKLFTEKASNLQSKLDEAERTLHSRINAPVPRD 535 (635)
Q Consensus 459 ~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~d 535 (635)
..|+..+++ ....|+.++..|+.+|..|...+. |+..|+++ +++|+.+++++..||.+++..+.+.+ +|.|
T Consensus 173 ~~L~~~~~~---~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~~~qf~~~~~~~~~Wl~~~e~~l~~~~---~g~~ 246 (322)
T 1u4q_A 173 KKLSDDNTI---GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASED---YGDT 246 (322)
T ss_dssp HHHHHTTCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC---CTTS
T ss_pred HHHHhcCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCCC
Confidence 666655443 345699999999999999999999 99999887 48999999999999999999998754 6999
Q ss_pred hHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 536 LDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHPAAKCIEAYMAAMQSQWAWLLQLALCLETHLKH 615 (635)
Q Consensus 536 l~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~ 615 (635)
+++++.++++|++|+. +|..+.+.+..+...|+.|+..+||+++.|..++..|+.+|..|...+.+|+.+|++
T Consensus 247 ~~~~~~ll~~h~~~~~-------el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~R~~~L~~ 319 (322)
T 1u4q_A 247 LAAIQGLLKKHEAFET-------DFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDE 319 (322)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999998
Q ss_pred HH
Q psy6471 616 AA 617 (635)
Q Consensus 616 a~ 617 (635)
|.
T Consensus 320 a~ 321 (322)
T 1u4q_A 320 NS 321 (322)
T ss_dssp --
T ss_pred cc
Confidence 74
No 4
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.3e-35 Score=303.66 Aligned_cols=312 Identities=16% Similarity=0.258 Sum_probs=273.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCChhh
Q psy6471 216 QRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQ-AEENINTLFSDVQTLREGRYPQASD 293 (635)
Q Consensus 216 ~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a-~~~~v~~l~~~a~~L~~~~~~~~~~ 293 (635)
..| .+|.+++..+..||.+++..+.+.++| .++..|+. +++|+.|..++.+ ++++|..++..|+.|+..+|++++.
T Consensus 6 ~~l-~~f~~~~~~l~~Wl~~~e~~l~~~~~g-~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~ 83 (323)
T 3edv_A 6 HRL-FQLNREVDDLEQWIAEREVVAGSHELG-QDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAAT 83 (323)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHTCCCCC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHcCCcCC-CCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCChHH
Confidence 344 799999999999999999999988887 47888887 8999999999998 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcc
Q psy6471 294 LHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEAD 373 (635)
Q Consensus 294 I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~ 373 (635)
|..+++.|+.+|+.|...+..|+. .|+.+ + .+++|++++.++..||.++...+. .+
T Consensus 84 i~~~~~~l~~~W~~L~~~~~~R~~---------------~L~~a-------~-~~~~f~~~~~e~~~Wl~~k~~~l~-~~ 139 (323)
T 3edv_A 84 IAEWKDGLNEAWADLLELIDTRTQ---------------ILAAS-------Y-ELHKFYHDAKEIFGRIQDKHKKLP-EE 139 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHH-------H-HHHHHHHHHHHHHHHHHHHHHTCC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHH-------H-HHHHHHHHHHHHHHHHHHHHhhcc-cc
Confidence 999999999999999999999963 34443 2 568899999999999999999884 89
Q ss_pred cCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHH
Q psy6471 374 YGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKA 453 (635)
Q Consensus 374 ~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~ 453 (635)
+|.|+++|+.++++|..+ +.++...... +..
T Consensus 140 ~~~d~~~v~~l~~~h~~~-----------------------------~~~l~~~~~~--------------------v~~ 170 (323)
T 3edv_A 140 LGRDQNTVETLQRMHTTF-----------------------------EHDIQALGTQ--------------------VRQ 170 (323)
T ss_dssp CCSSHHHHHHHHHHHHHH-----------------------------HHHTHHHHHH--------------------HHH
T ss_pred cccChHHHHHHHHHHHHH-----------------------------HHHHHHHHHH--------------------HHH
Confidence 999999999988888642 2333333322 345
Q ss_pred HHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHhHHHHHHHhhcccCC
Q psy6471 454 LNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--TKLFTEKASNLQSKLDEAERTLHSRINA 530 (635)
Q Consensus 454 L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L~~F~~~~~e~~~Wl~eke~~l~s~~~~ 530 (635)
|...|..|+..+.+ ++...|+.++..|+.+|+.|...+. |+..|+++ +++|+.+++++..||.+++..+.+.+
T Consensus 171 l~~~a~~L~~~~~~--~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~~~F~~~~~~l~~Wl~~~~~~l~~~~-- 246 (323)
T 3edv_A 171 LQEDAARLQAAYAG--DKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQE-- 246 (323)
T ss_dssp HHHHHHHHHHHCCT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHHhCCc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc--
Confidence 66666667654322 2445699999999999999999999 99999876 58999999999999999999999854
Q ss_pred CCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 531 PVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHPAAKCIEAYMAAMQSQWAWLLQLALCLE 610 (635)
Q Consensus 531 ~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~~~~I~~~l~~L~~~W~~L~~~~~~R~ 610 (635)
.|.|+++++.++++|+.|+. ||.++++.+..+...|+.|+..+||++..|..++..|+.+|+.|...++.|.
T Consensus 247 -~~~d~~~~e~ll~~h~~l~~-------ei~~~~~~~~~l~~~g~~Ll~~~~~~~~~i~~~l~~L~~~w~~l~~~w~~R~ 318 (323)
T 3edv_A 247 -KPRDVSSVELLMNNHQGIKA-------EIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRW 318 (323)
T ss_dssp -CCCSHHHHHHHHHHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q psy6471 611 THLK 614 (635)
Q Consensus 611 ~~L~ 614 (635)
..|+
T Consensus 319 ~~L~ 322 (323)
T 3edv_A 319 EWLR 322 (323)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9985
No 5
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=100.00 E-value=3.2e-36 Score=294.71 Aligned_cols=221 Identities=33% Similarity=0.540 Sum_probs=202.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHHHHHh
Q psy6471 93 YDSESQQRVNEYCDLASSLHLWMREKTAYMQDRNFPSTLIEMKKLAADSARFRTEEVPPRQRDKQRLQHIFQDLTKYFED 172 (635)
Q Consensus 93 ~~~e~~~~~~~y~~~~~~Ll~WI~~~~~~l~~~~~~~sl~~vq~~l~~~~~f~~~E~~~~~~ek~~le~l~~~l~~~~~~ 172 (635)
...|++.++.+|+++|++|+.||++++..++++.||+++.+|+.++.+|.+|++.+|||++.+|++++++|++|+++++.
T Consensus 5 ~~~e~e~~~~eYe~~as~Ll~WI~~~~~~l~~r~f~~sl~~vq~~l~~f~~fr~~ekppk~~EK~~Le~ll~~lqtklr~ 84 (235)
T 2odv_A 5 RANELQLRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLEGAVQA 84 (235)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred cCCCcCCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCch
Q psy6471 173 VGEVDIDPELHIDVIERNWSRLLAAHQEKDSILQDEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHP 252 (635)
Q Consensus 173 ~~~~~~~~~~~~~~i~~~W~~L~~~~~~r~~~L~~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ 252 (635)
|.+..|+|+.+.+|+++|..|+.++++|+.+|+.++.|+++++++|.+|.++|..++.||.+++..|++ ++. ++..
T Consensus 85 -~~~~ppeg~~~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L~~-d~~--~l~~ 160 (235)
T 2odv_A 85 -GQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQS-DVR--LLAA 160 (235)
T ss_dssp -TSSCCCTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--HTTT
T ss_pred -CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhh--hcch
Confidence 543345589999999999999999999999999999999999999999999999999999999999944 443 3444
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHHHHHHHhccc
Q psy6471 253 LDAKHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRVQKLHQRWVALRSLLHSRLV 317 (635)
Q Consensus 253 ve~lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~~~L~~~w~~L~~~~~~R~~ 317 (635)
..++++|++|+.||.+++++|..|...|+.|.+++|++++.|..|+..|.++|..|+..+..|..
T Consensus 161 ~~a~k~~e~ie~dL~~~e~~i~~l~~~a~~L~~~~y~~a~~i~~r~~~l~~~w~~L~~~~~~r~~ 225 (235)
T 2odv_A 161 GKVPQRAGEVERDLDKADSMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLK 225 (235)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44588999999999999999999999999999999999999999999999999999999999864
No 6
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=100.00 E-value=1.8e-34 Score=301.85 Aligned_cols=315 Identities=15% Similarity=0.159 Sum_probs=243.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHH
Q psy6471 219 AEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKR 297 (635)
Q Consensus 219 a~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r 297 (635)
+++|..++..+.+||.+++..+.+.++|. ++..++. +++|+.|+.+|.++.+.|..|...|+.|...++++++.|..+
T Consensus 6 ~qqf~~~~~el~~Wl~e~~~~l~~~~~g~-d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~ 84 (326)
T 3kbt_A 6 AQQYYLDADEAEAWIGEQELYVISDEIPK-DEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGEQIIRL 84 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHH
Confidence 48999999999999999999999988884 6778886 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q psy6471 298 VQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSD 377 (635)
Q Consensus 298 ~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~d 377 (635)
+..|+.+|..|...+..|+. .|+++ + .+++|++++.++..||.+++..+.+.++|.|
T Consensus 85 l~~l~~~w~~L~~~~~~R~~---------------~Le~~-------l-~l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~d 141 (326)
T 3kbt_A 85 QGQVDKHYAGLKDVAEERKR---------------KLENM-------Y-HLFQLKRETDDLEQWISEKELVASSPEMGQD 141 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------------HHHHH-------H-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHH---------------HHHHH-------H-HHHHHHHHHHHHHHHHHHHHHHHccccCCCC
Confidence 99999999999999999963 44443 2 5689999999999999999999999999999
Q ss_pred hhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6471 378 LQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNED 457 (635)
Q Consensus 378 l~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~ 457 (635)
++.|+.++.+|.. |...+.... .+ .+..++..
T Consensus 142 ~~~v~~l~~~~~~------------------------------------f~~el~~~~-------~~-----~v~~l~~~ 173 (326)
T 3kbt_A 142 FDHVTLLRDKFRD------------------------------------FARETGAIG-------QE-----RVDNVNAF 173 (326)
T ss_dssp HHHHHHHHHHHHH------------------------------------HHHHHHHHH-------HH-----HHHHHHHH
T ss_pred HHHHHHHHHHHHH------------------------------------HHHHHHHhh-------hH-----HHHHHHHH
Confidence 9999998888864 222222100 00 13567777
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHhHHHHHHHhhcccCCCCCC
Q psy6471 458 ADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--TKLFTEKASNLQSKLDEAERTLHSRINAPVPR 534 (635)
Q Consensus 458 a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~ 534 (635)
+..|+..+++. ...|+.+++.|+.+|..|...+. |...|+.+ +++|+.+|+++..||.+++..+. . ++|.
T Consensus 174 ~~~L~~~~~~~---~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~~~f~~~~~e~~~Wl~ek~~~L~-~---~~~~ 246 (326)
T 3kbt_A 174 IERLIDAGHSE---AATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELP-E---DVGL 246 (326)
T ss_dssp HHHHHHHCCTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHcCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc-c---cccC
Confidence 88888766553 34699999999999999999999 99999876 49999999999999999999884 2 4689
Q ss_pred ChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 535 DLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHP-AAKCIEAYMAAMQSQWAWLLQLALCLETHL 613 (635)
Q Consensus 535 dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~-~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L 613 (635)
|+.+++.++++|+.|+. +|.++++.|+.+...|+.|+..+++ .+..|..++..|+.+|+.|...+..|+..|
T Consensus 247 d~~~~~~ll~~~~~~e~-------~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L 319 (326)
T 3kbt_A 247 DASTAESFHRVHTAFER-------DVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQL 319 (326)
T ss_dssp --------------CHH-------HHHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHC----------
T ss_pred CHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999986554 478999999999999999999999999999
Q ss_pred HHHHHH
Q psy6471 614 KHAAYY 619 (635)
Q Consensus 614 ~~a~~~ 619 (635)
++|.++
T Consensus 320 ~~a~~~ 325 (326)
T 3kbt_A 320 VDTADK 325 (326)
T ss_dssp ------
T ss_pred HHHHhc
Confidence 999764
No 7
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.98 E-value=6e-31 Score=281.54 Aligned_cols=210 Identities=21% Similarity=0.421 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhh
Q psy6471 351 HFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTR 430 (635)
Q Consensus 351 f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~ 430 (635)
.+++++++.+||.+++..+.|.+||+||++|+.|+++|+. ++.+|..+...
T Consensus 7 ~~r~v~dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~-----------------------------lE~eI~a~~~~ 57 (450)
T 3r6n_A 7 TKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRG-----------------------------IHNSIGDYRWQ 57 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHH-----------------------------HHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHH-----------------------------HHHHHHHHHHH
Confidence 4688999999999999999999999999999998888863 45556566655
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q psy6471 431 VEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNATKLFTEK 509 (635)
Q Consensus 431 l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L~~F~~~ 509 (635)
|+.+.. .+ + . ..++..|..+|+.|.+.+. |+++|+ +|++|+++
T Consensus 58 v~~l~~--------------------~a-----~----~------~~~~~~L~~~y~~L~~~a~~Rr~~Le-~L~qFl~d 101 (450)
T 3r6n_A 58 LDKIKA--------------------DL-----R----E------KSAIYQLEEEYENLLKASFERMDHLR-QLQNIIQA 101 (450)
T ss_dssp HHHHHH--------------------HC-----C----C------HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHH--------------------hh-----c----C------cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 543321 10 0 1 1235789999999999999 999995 89999999
Q ss_pred HHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q psy6471 510 ASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHPAAKCIE 589 (635)
Q Consensus 510 ~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~~~~I~ 589 (635)
|++++.||+||++.+.+.+|+ .++..+..+++||++|++ ||.+++++++.|...|+.|+..|||+++.|+
T Consensus 102 ~~ee~~Wi~EKe~~~~s~d~g---d~l~dv~~l~~khq~l~~-------EL~~~e~~i~~v~~~G~~Li~~~Hpas~~I~ 171 (450)
T 3r6n_A 102 TSREIMWINDCEEEELLYDWS---DKNTNIAQKQEAFSIRMS-------QLEVKEKELNKLKQESDQLVLNQHPASDKIE 171 (450)
T ss_dssp HHHHHHHHHHHHHHHHSCCCS---TTCCCTTHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccC---cChhhHHHHHHHHHHHHH-------HHHHchHHHHHHHHHHHHHHHcCCCCchHHH
Confidence 999999999999999999974 444445566788888888 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy6471 590 AYMAAMQSQWAWLLQLALCLETHLKHAAYYHQFWREMKDAETWINK 635 (635)
Q Consensus 590 ~~l~~L~~~W~~L~~~~~~R~~~L~~a~~~~qf~~~~~e~~~Wl~e 635 (635)
++++.|+.+|++|.+++.+|+.+|+++..++||+.||+++++||.+
T Consensus 172 ~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~Da~EaesWL~e 217 (450)
T 3r6n_A 172 AYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKG 217 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999974
No 8
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.97 E-value=5.3e-29 Score=266.50 Aligned_cols=314 Identities=11% Similarity=0.157 Sum_probs=265.4
Q ss_pred HHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHH
Q psy6471 223 TREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRVQKL 301 (635)
Q Consensus 223 ~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~~~L 301 (635)
.+.++++..||.+++..+.++++|. ++..|+. ++||..|+++|.++.++|+.|...+ ++ ..++..|
T Consensus 8 ~r~v~dl~~Wl~E~~~~L~S~d~Gk-DL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a------~~------~~~~~~L 74 (450)
T 3r6n_A 8 KHVTSECLGWMRQQRAEMDMVAWGV-DLASVEQHINSHRGIHNSIGDYRWQLDKIKADL------RE------KSAIYQL 74 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CC------HHHHHHH
T ss_pred hccHHHHHHHHHHHHHhcCccccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cC------cHHHHHH
Confidence 3678889999999999999999996 7888997 8999999999999999999998763 12 2357889
Q ss_pred HHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhH
Q psy6471 302 HQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGV 381 (635)
Q Consensus 302 ~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~v 381 (635)
..+|..|...+..|+. .| + .+++|++++++.+.||.|++..+.+.++|.++..|
T Consensus 75 ~~~y~~L~~~a~~Rr~---------------~L-------e----~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv 128 (450)
T 3r6n_A 75 EEEYENLLKASFERMD---------------HL-------R----QLQNIIQATSREIMWINDCEEEELLYDWSDKNTNI 128 (450)
T ss_dssp HHHHHHHHHHHHHHHH---------------HH-------H----HHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCT
T ss_pred HHHHHHHHHHHHHHHH---------------HH-------H----HHHHHHHHHHHHHHHHHHHHHHHhccccCcChhhH
Confidence 9999999999999963 22 2 46899999999999999999999999999999889
Q ss_pred HHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHh
Q psy6471 382 QAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKL 461 (635)
Q Consensus 382 e~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l 461 (635)
..++++|+++ ..+|...... +..+...++.|
T Consensus 129 ~~l~~khq~l-----------------------------~~EL~~~e~~--------------------i~~v~~~G~~L 159 (450)
T 3r6n_A 129 AQKQEAFSIR-----------------------------MSQLEVKEKE--------------------LNKLKQESDQL 159 (450)
T ss_dssp THHHHHHHHH-----------------------------HHHHHHHHHH--------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHH-----------------------------HHHHHHchHH--------------------HHHHHHHHHHH
Confidence 8888888642 2233222222 34556677778
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHH
Q psy6471 462 LEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--TKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDS 538 (635)
Q Consensus 462 ~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~ 538 (635)
+..++|.. ..|+.+++.|+..|+.|.+++. |+..|+++ +++|+.+|++.++||.+++..+.+...++.|.|+.+
T Consensus 160 i~~~Hpas---~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~Da~EaesWL~eke~~l~s~y~~D~g~d~~~ 236 (450)
T 3r6n_A 160 VLNQHPAS---DKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQH 236 (450)
T ss_dssp HHTTCTTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTTCCHHH
T ss_pred HHcCCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcccccCcCCCCHHH
Confidence 87766654 4599999999999999999999 99999876 599999999999999999999998722246999999
Q ss_pred HHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhc---C----------------------------------
Q psy6471 539 LEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQ---H---------------------------------- 581 (635)
Q Consensus 539 v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~---~---------------------------------- 581 (635)
++.|++||.+|+. +|.+.+..+..+...++.|+.. +
T Consensus 237 ~e~LLkkh~~le~-------~l~~~~~~I~~L~~qA~~l~~l~~r~~~~~~~~~~~V~alcdy~~~e~~i~kge~~~L~~ 309 (450)
T 3r6n_A 237 LLEQIKELEKERE-------KILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKD 309 (450)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHTTCCCCGGGSTTCCCSSCCEEEESSCEEETTEEECTTCEEEEEE
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccccccCCCcccCCCceEEEeccccCCeeeEecCCEEEEec
Confidence 9999999999999 9999999999999999987630 0
Q ss_pred --------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy6471 582 --------------------------HPAAKCIEAYMAAMQSQWAWLLQLALCLETHLKHAAYYHQFWREMKDAETWIN 634 (635)
Q Consensus 582 --------------------------h~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~~~~qf~~~~~e~~~Wl~ 634 (635)
+|..++..+....|...++.|..+...+...+++...+|.|+.|++.+.+|..
T Consensus 310 ns~~~~W~V~~~~G~~~~vPavcf~ipppd~eai~~a~~l~~~~~~~~~lw~~~~~~~~~~~~~~~~~~d~~~i~~w~~ 388 (450)
T 3r6n_A 310 NNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAVDLSCKIEQYYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTI 388 (450)
T ss_dssp CSSSSEEEEECSSSCCEEEEGGGEECCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred CCCCCceEEecCCCCeeccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 11124667788999999999999999999999999999999999999999963
No 9
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.97 E-value=2.1e-28 Score=255.29 Aligned_cols=313 Identities=14% Similarity=0.312 Sum_probs=253.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHHHHHhcCCCcCC
Q psy6471 100 RVNEYCDLASSLHLWMREKTAYMQDRNFPSTLIEMKKLAADSARFRTEEVPPRQRDKQRLQHIFQDLTKYFEDVGEVDID 179 (635)
Q Consensus 100 ~~~~y~~~~~~Ll~WI~~~~~~l~~~~~~~sl~~vq~~l~~~~~f~~~E~~~~~~ek~~le~l~~~l~~~~~~~~~~~~~ 179 (635)
....|.+.+.++..||.+++..+.+.++|.++.+|+.++.+|+.|.. ++..+.. .+..+........ ..++.. +
T Consensus 4 ~~~~F~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~le~-~i~~~~~---~v~~l~~~a~~l~-~~~~~~-~ 77 (322)
T 1u4q_A 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEA-DISAHED---RLKDLNSQADSLM-TSSAFD-T 77 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHH-HHHHTHH---HHHHHHHHHHHHT-TCCSSC-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHH-HHHHhHH---HHHHHHHHHHHHh-hcCCCC-h
Confidence 45789999999999999999999999999999999999999998875 4443332 2333333322222 223211 1
Q ss_pred C--CCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-h
Q psy6471 180 P--ELHIDVIERNWSRLLAAHQEKDSILQDEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-K 256 (635)
Q Consensus 180 ~--~~~~~~i~~~W~~L~~~~~~r~~~L~~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-l 256 (635)
+ ...+..|+.+|..|......|.. +|+....+ .+|.+++..+..||.+++..+.+.++|. ++..++. +
T Consensus 78 ~~i~~~~~~l~~~w~~L~~~~~~R~~-------~Le~~~~l-~~f~~~~~~~~~Wl~e~e~~~~~~~~g~-dl~~v~~ll 148 (322)
T 1u4q_A 78 SQVKDKRETINGRFQRIKSMAAARRA-------KLNESHRL-HQFFRDMDDEESWIKEKKLLVSSEDYGR-DLTGVQNLR 148 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCCCCCS-SHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCcCC-CHHHHHHHH
Confidence 1 24678899999999999999999 55555555 7899999999999999999999888884 7888887 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhh
Q psy6471 257 HNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQ 336 (635)
Q Consensus 257 kkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~ 336 (635)
++|+.|+.+|.++++.|..|...|+.|+..+|++++.|..++..|+.+|+.|...+..|+. .|++
T Consensus 149 ~~h~~l~~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~---------------~L~~ 213 (322)
T 1u4q_A 149 KKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQ---------------RLEE 213 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
Confidence 9999999999999999999999999999999999999999999999999999999999963 4554
Q ss_pred hhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHH
Q psy6471 337 TRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAI 416 (635)
Q Consensus 337 ~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~ 416 (635)
+. .+++|+.+++++..||.+++..+.+.++|.|+++++.++++|..+
T Consensus 214 ~~--------~~~qf~~~~~~~~~Wl~~~e~~l~~~~~g~~~~~~~~ll~~h~~~------------------------- 260 (322)
T 1u4q_A 214 SL--------EYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAF------------------------- 260 (322)
T ss_dssp HH--------HHHHHHHHHHHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHH-------------------------
T ss_pred HH--------HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH-------------------------
Confidence 42 568999999999999999999999999999999999988888642
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-H
Q psy6471 417 HQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-A 495 (635)
Q Consensus 417 h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R 495 (635)
..++..+... +..|...+..|+..+++ +...|..++..|+.+|..|...+. |
T Consensus 261 ----~~el~~~~~~--------------------v~~l~~~~~~L~~~~~~---~~~~i~~~~~~l~~rw~~l~~~~~~R 313 (322)
T 1u4q_A 261 ----ETDFTVHKDR--------------------VNDVCANGEDLIKKNNH---HVENITAKMKGLKGKVSDLEKAAAQR 313 (322)
T ss_dssp ----HHHHHHHHHH--------------------HHHHHHHHHHHHHTTCT---THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHH--------------------HHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333 34566677777765444 345699999999999999999999 9
Q ss_pred HHHHHHH
Q psy6471 496 EEDMKNA 502 (635)
Q Consensus 496 ~~~Le~~ 502 (635)
+.+|+++
T Consensus 314 ~~~L~~a 320 (322)
T 1u4q_A 314 KAKLDEN 320 (322)
T ss_dssp HHHHTC-
T ss_pred HHHHhhc
Confidence 9999754
No 10
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.97 E-value=2.3e-28 Score=268.93 Aligned_cols=342 Identities=14% Similarity=0.208 Sum_probs=272.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhhhhhHHHHHHHHHHHH-HHHH-------HHHHHHHH
Q psy6471 211 RLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDAKHNVDVLEHDLRQAE-ENIN-------TLFSDVQT 282 (635)
Q Consensus 211 rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~lkkh~~le~di~a~~-~~v~-------~l~~~a~~ 282 (635)
++..+..++.+|.+.+..+..||.+++..+.+.++|. ++..+ .++|+.|......+. +++. .++..+..
T Consensus 5 ~~~e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~-~l~~~--~~~l~~f~~~~~~~~p~~~~ek~~le~~~~~~~~~ 81 (476)
T 1hci_A 5 VNQENERLMEEYERLASELLEWIRRTIPWLENRTPEK-TMQAM--QKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTK 81 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCCCCS-SSTTT--THHHHHHHHHHHHTHHHHHHHHHHTTTHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cHHHH--HHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3445677779999999999999999999999877663 44333 566778888788877 7777 67777777
Q ss_pred HhcCCCC-ChhhHHHHHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhh---hHhhhhhhhhhhHHHHHHHHH
Q psy6471 283 LREGRYP-QASDLHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQT---RTVMETRLVDTNTHFRALQEA 358 (635)
Q Consensus 283 L~~~~~~-~~~~I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~---~~~le~~~~~~~~f~~~~~e~ 358 (635)
|...+.+ -.+.+......|+..|+.|......|.. .|+.+ ...|+.. +++|.+++.++
T Consensus 82 l~~~~~~~~~~~~~~~~~~i~~~w~~L~~l~~~r~~---------------~l~~~~~R~~~Le~~---~~~f~~~~~~~ 143 (476)
T 1hci_A 82 LRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEE---------------WLLNEIRRLERLEHL---AEKFRQKASTH 143 (476)
T ss_dssp TTTTTSCCCCCCGGGCSSSHHHHHHHHHHHHTTHHH---------------HHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 7664432 1233555677788899999888877643 22222 1123332 57899999999
Q ss_pred HHHHHHHHHhhhhccc-CCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy6471 359 IEWVKNKLAQIQEADY-GSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAA 437 (635)
Q Consensus 359 ~~Wl~e~~~~l~s~~~-g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~ 437 (635)
.+||.+++..+.+.++ |.|+++|+.++++|..+ +.+|..+...+
T Consensus 144 ~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~kh~~~-----------------------------~~~l~~~~~~v------ 188 (476)
T 1hci_A 144 ETWAYGKEQILLQKDYESASLTEVRALLRKHEAF-----------------------------ESDLAAHQDRV------ 188 (476)
T ss_dssp HHHHTTHHHHHHCCGGGSCCHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHH------
T ss_pred HHHHHHHHHHhhcCCccCCCHHHHHHHHHHHHHH-----------------------------HHHHHHhHHHH------
Confidence 9999999999999999 99999999998888642 33333333333
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--H--------HH
Q psy6471 438 KFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNAT--K--------LF 506 (635)
Q Consensus 438 ~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L--~--------~F 506 (635)
..+...++.|+.++++ +...|..++..|+.+|+.|...+. |+.+|+.++ + +|
T Consensus 189 --------------~~l~~~~~~L~~~~~~---~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~l~~~f 251 (476)
T 1hci_A 189 --------------EQIAAIAQELNELDYH---DAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEF 251 (476)
T ss_dssp --------------HHHHHHHHHHHHTTCT---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHHhCcCc---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566667655433 345699999999999999999999 999998763 4 79
Q ss_pred HHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHH---HHHHHHHHhcCCC
Q psy6471 507 TEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAV---QDRGEALILQHHP 583 (635)
Q Consensus 507 ~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v---~~~g~~L~~~~h~ 583 (635)
..++.++..||.+++..+.+.+ .|.|+++++.++++|++|.. +|..+++.+..+ ...|+.|+..+|+
T Consensus 252 ~~~a~~~~~Wl~~~~~~l~~~~---~~~dl~~v~~ll~~h~~~~~-------~l~~~~~~~~~~~~l~~~~~~l~~~~~~ 321 (476)
T 1hci_A 252 AKRAAPFNNWMEGAMEDLQDMF---IVHSIEEIQSLITAHEQFKA-------TLPEADGERQSIMAIQNEVEKVIQSYNI 321 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC---CCSSHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHhccc---ccCCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999876 59999999999999999998 888888777776 7888999998887
Q ss_pred ----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHhhhC
Q psy6471 584 ----AAKCIEAYMAAMQSQWAWLLQLALCLETHLKHAAYY--------HQFWREMKDAETWINK 635 (635)
Q Consensus 584 ----~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~~~--------~qf~~~~~e~~~Wl~e 635 (635)
+++.|..++..|..+|..|..++..|..+|++++.. ++|+.+++++.+||.+
T Consensus 322 ~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~L~~~F~~~a~~~~~Wl~e 385 (476)
T 1hci_A 322 RISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQN 385 (476)
T ss_dssp CSCSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999974 6999999999999964
No 11
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.96 E-value=1.8e-28 Score=239.44 Aligned_cols=200 Identities=24% Similarity=0.439 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhh
Q psy6471 351 HFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTR 430 (635)
Q Consensus 351 f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~ 430 (635)
.+++++++.+||.++...+++.+||+|+++|+.++++|+. ++.+|..+...
T Consensus 10 ~~r~~~dl~~Wl~e~~~~l~s~d~G~Dl~~ve~llkkH~~-----------------------------le~ei~~~~~~ 60 (210)
T 3pdy_A 10 TLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRG-----------------------------LHQSIEEFRAK 60 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHHHH-----------------------------HHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHH-----------------------------HHHHHHHHHHH
Confidence 3799999999999999999999999999999998888864 45555555555
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q psy6471 431 VEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNATKLFTEK 509 (635)
Q Consensus 431 l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L~~F~~~ 509 (635)
|+. |+..+..|.+. ....|..++..|..+|..|+.++. |+.+|+ +|++|+++
T Consensus 61 v~~--------------------l~~~a~~l~~~------~~~~i~~rl~~l~~~~~~L~~~a~~R~~~L~-~L~~f~~~ 113 (210)
T 3pdy_A 61 IER--------------------ARSDEGQLSPA------TRGAYRDCLGRLDLQYAKLLNSSKARLRSLE-SLHSFVAA 113 (210)
T ss_dssp HHH--------------------HHHGGGGSCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHH--------------------HHHHHHHcCcc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 543 33444443221 112489999999999999999999 999996 99999999
Q ss_pred HHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q psy6471 510 ASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHPAAKCIE 589 (635)
Q Consensus 510 ~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~~~~I~ 589 (635)
|++++.||++|+..+.+.+| |.|+..++.+++||+.|+. ||.+++++++.|+..|+.|+..|||+++.|+
T Consensus 114 ~~~~~~Wl~eke~~~~s~d~---g~~~~~v~~l~~k~~~f~~-------el~~~~~~v~~l~~~~~~Ll~~~h~~~~~I~ 183 (210)
T 3pdy_A 114 ATKELMWLNEKEEEEVGFDW---SDRNTNMTAKKESYSALMR-------ELELKEKKIKELQNAGDRLLREDHPARPTVE 183 (210)
T ss_dssp HHHHHHHHHHHHHHHHHSCC---STTSCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccc---CCCchhHHHHHHHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 99999999999999999885 7788889999999998888 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 590 AYMAAMQSQWAWLLQLALCLETHLKHA 616 (635)
Q Consensus 590 ~~l~~L~~~W~~L~~~~~~R~~~L~~a 616 (635)
.+++.|+.+|++|.+++.+|..+|+++
T Consensus 184 ~~~~~l~~~W~~L~~L~~~~e~hLk~~ 210 (210)
T 3pdy_A 184 SFQAALQTQWSWMLQLCCCIEAHLKEN 210 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999864
No 12
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.96 E-value=7.2e-28 Score=251.71 Aligned_cols=316 Identities=12% Similarity=0.222 Sum_probs=223.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHHHHHhcCCCcCC
Q psy6471 100 RVNEYCDLASSLHLWMREKTAYMQDRNFPSTLIEMKKLAADSARFRTEEVPPRQRDKQRLQHIFQDLTKYFEDVGEVDID 179 (635)
Q Consensus 100 ~~~~y~~~~~~Ll~WI~~~~~~l~~~~~~~sl~~vq~~l~~~~~f~~~E~~~~~~ek~~le~l~~~l~~~~~~~~~~~~~ 179 (635)
..++|...++++..||.++...+++.++|.++.+++.++.+|+.|.. ++..+... ++.+....+..+ ..+++..|
T Consensus 5 ~~qqf~~~~~el~~Wl~e~~~~l~~~~~g~d~~~~~~ll~kh~~~~~-el~~~~~~---v~~l~~~~~~L~-~~~~~~~~ 79 (326)
T 3kbt_A 5 EAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQR-AVEDYGRN---IKQLASRAQGLL-SAGHPEGE 79 (326)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTSCCCCCSSHHHHHHHHHHHHHHHH-HHHHHHHH---HHHHHHHHHHHH-HTTCTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHH-HHHHHHHH---HHHHHHHHHHhh-cCCCCChH
Confidence 45789999999999999999999999999999999999999999976 55444333 333333333333 23332211
Q ss_pred C-CCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hh
Q psy6471 180 P-ELHIDVIERNWSRLLAAHQEKDSILQDEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KH 257 (635)
Q Consensus 180 ~-~~~~~~i~~~W~~L~~~~~~r~~~L~~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lk 257 (635)
. ..++..|+.+|..|......|+. +|+....+ .+|.+++..+..||.+++..+.+.++| +++..++. ++
T Consensus 80 ~i~~~l~~l~~~w~~L~~~~~~R~~-------~Le~~l~l-~~f~~~~~~l~~Wl~~~e~~l~~~~~g-~d~~~v~~l~~ 150 (326)
T 3kbt_A 80 QIIRLQGQVDKHYAGLKDVAEERKR-------KLENMYHL-FQLKRETDDLEQWISEKELVASSPEMG-QDFDHVTLLRD 150 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCC-SSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccccCC-CCHHHHHHHHH
Confidence 1 25678999999999999999999 55555556 799999999999999999999887777 46777886 89
Q ss_pred hHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhh
Q psy6471 258 NVDVLEHDLRQ-AEENINTLFSDVQTLREGRYPQASDLHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQ 336 (635)
Q Consensus 258 kh~~le~di~a-~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~ 336 (635)
+|+.|+.++.+ ++++|..|+..|+.|+..+|++++.|..+++.|+.+|..|...+..|.. .|+.
T Consensus 151 ~~~~f~~el~~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~---------------~L~~ 215 (326)
T 3kbt_A 151 KFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQ---------------LLAA 215 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
Confidence 99999999998 7999999999999999999999999999999999999999999999963 3444
Q ss_pred hhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHH
Q psy6471 337 TRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAI 416 (635)
Q Consensus 337 ~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~ 416 (635)
+ + .+++|+.+++++..||.++...+ +.++|.|+++++.++++|.+
T Consensus 216 a-------~-~~~~f~~~~~e~~~Wl~ek~~~L-~~~~~~d~~~~~~ll~~~~~-------------------------- 260 (326)
T 3kbt_A 216 S-------Y-DLHRYFYTGAEILGLIDEKHREL-PEDVGLDASTAESFHRVHTA-------------------------- 260 (326)
T ss_dssp H-------H-HHHHHHHHHHHHHHHHHHHHHC------------------------------------------------
T ss_pred H-------H-HHHHHHHHHHHHHHHHHHHHhhC-cccccCCHHHHHHHHHHHHH--------------------------
Confidence 3 2 56889999999999999999999 58899999999998888764
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-H
Q psy6471 417 HQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-A 495 (635)
Q Consensus 417 h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R 495 (635)
+..+|..+...| +.|...|..|...+.+ +....|..++..|+.+|+.|...+. |
T Consensus 261 ---~e~~l~~~~~~v--------------------~~l~~~a~~L~~~~~~--~~~~~i~~~~~~l~~~W~~L~~~~~~R 315 (326)
T 3kbt_A 261 ---FERDVHLLGVQV--------------------QQFQDVATRLQTAYAG--EKAEAIQNKEQEVSAAWQALLDACAGR 315 (326)
T ss_dssp ---CHHHHHHHHHHH--------------------HHHHHHHHHHHHHCCT--HHHHHHHHHHHHHHHHHHHHC------
T ss_pred ---HHHHHHHHHHHH--------------------HHHHHHHHHHHHHCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233444444443 4455566666654221 2456799999999999999999999 9
Q ss_pred HHHHHHHHH
Q psy6471 496 EEDMKNATK 504 (635)
Q Consensus 496 ~~~Le~~L~ 504 (635)
+..|++++-
T Consensus 316 ~~~L~~a~~ 324 (326)
T 3kbt_A 316 RTQLVDTAD 324 (326)
T ss_dssp ---------
T ss_pred HHHHHHHHh
Confidence 999987753
No 13
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.2e-27 Score=247.69 Aligned_cols=311 Identities=17% Similarity=0.250 Sum_probs=246.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhccccccCCCh-hHHHHHHHHHHHHHHHHHHHhcCCCcC
Q psy6471 100 RVNEYCDLASSLHLWMREKTAYMQDRNFPSTLIEMKKLAADSARFRTEEVPP-RQRDKQRLQHIFQDLTKYFEDVGEVDI 178 (635)
Q Consensus 100 ~~~~y~~~~~~Ll~WI~~~~~~l~~~~~~~sl~~vq~~l~~~~~f~~~E~~~-~~~ek~~le~l~~~l~~~~~~~~~~~~ 178 (635)
....|.+.+++++.||.+++..+++.++|.+++.|+.++.+|..|.. +..+ +. .++..+...... +...|++..
T Consensus 7 ~l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~l~~~~~~f~~-el~~~~~---~~v~~v~~~~~~-L~~~~~~~~ 81 (323)
T 3edv_A 7 RLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFAR-DTGNIGQ---ERVDTVNHLADE-LINSGHSDA 81 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHH-HHHHHHH---HHHHHHHHHHHH-HHHTTCTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHH-HHHHhhh---HHHHHHHHHHHH-HHHcCCCCh
Confidence 45789999999999999999999999999999999999999999986 4322 11 233333332222 333454333
Q ss_pred CC-CCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-h
Q psy6471 179 DP-ELHIDVIERNWSRLLAAHQEKDSILQDEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-K 256 (635)
Q Consensus 179 ~~-~~~~~~i~~~W~~L~~~~~~r~~~L~~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-l 256 (635)
|. ...+++|+.+|..|......|...|. ....+ ++|.++|..+..||.+++..+. .++|. ++..++. +
T Consensus 82 ~~i~~~~~~l~~~W~~L~~~~~~R~~~L~-------~a~~~-~~f~~~~~e~~~Wl~~k~~~l~-~~~~~-d~~~v~~l~ 151 (323)
T 3edv_A 82 ATIAEWKDGLNEAWADLLELIDTRTQILA-------ASYEL-HKFYHDAKEIFGRIQDKHKKLP-EELGR-DQNTVETLQ 151 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHH-HHHHHHHHHHHHHHHHHHHTCC-CCCCS-SHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHH-HHHHHHHHHHHHHHHHHHhhcc-ccccc-ChHHHHHHH
Confidence 22 35788999999999999999999444 44444 7899999999999999999885 55663 6777887 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-ChhhHHHHHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhh
Q psy6471 257 HNVDVLEHDLRQAEENINTLFSDVQTLREGRYP-QASDLHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTR 335 (635)
Q Consensus 257 kkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~-~~~~I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~ 335 (635)
++|+.|+.+|.+++..|..|...|..|....++ +++.|..++..|+.+|+.|+..+..|+ ..|+
T Consensus 152 ~~h~~~~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~---------------~~L~ 216 (323)
T 3edv_A 152 RMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRR---------------VRLV 216 (323)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
Confidence 999999999999999999999999999986544 578899999999999999999999996 3455
Q ss_pred hhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHH
Q psy6471 336 QTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIA 415 (635)
Q Consensus 336 ~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~ 415 (635)
++ + .+++|+.+++++..||.+++..+.+.+.|.|+++++.++.+|+.
T Consensus 217 ~~-------~-~~~~F~~~~~~l~~Wl~~~~~~l~~~~~~~d~~~~e~ll~~h~~------------------------- 263 (323)
T 3edv_A 217 DT-------G-DKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQG------------------------- 263 (323)
T ss_dssp HH-------H-HHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSHHHHHHHHHHHHH-------------------------
T ss_pred HH-------H-HHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHH-------------------------
Confidence 54 2 56889999999999999999999999999999999998888863
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-
Q psy6471 416 IHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR- 494 (635)
Q Consensus 416 ~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~- 494 (635)
+..+|..+...+ ..+...++.|+..+++ ....|+.++..|+.+|+.|...+.
T Consensus 264 ----l~~ei~~~~~~~--------------------~~l~~~g~~Ll~~~~~---~~~~i~~~l~~L~~~w~~l~~~w~~ 316 (323)
T 3edv_A 264 ----IKAEIDARNDSF--------------------TTCIELGKSLLARKHY---ASEEIKEKLLQLTEKRKEMIDKWED 316 (323)
T ss_dssp ----HHHHHHHTHHHH--------------------HHHHHHHHHHHHTTCT---THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHH--------------------HHHHHHHHHHHhCCCC---chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233333333333 4455566677765543 235699999999999999999999
Q ss_pred HHHHHH
Q psy6471 495 AEEDMK 500 (635)
Q Consensus 495 R~~~Le 500 (635)
|...|+
T Consensus 317 R~~~L~ 322 (323)
T 3edv_A 317 RWEWLR 322 (323)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999883
No 14
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.96 E-value=9.8e-27 Score=228.42 Aligned_cols=209 Identities=22% Similarity=0.307 Sum_probs=181.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHH
Q psy6471 347 DTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQ 426 (635)
Q Consensus 347 ~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q 426 (635)
....|.+.+.++..||.+++..+.+.++|+|+++|+.++++|+. ++.+|..
T Consensus 4 ~~~~F~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~-----------------------------le~~i~~ 54 (216)
T 1u5p_A 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQL-----------------------------LEADISA 54 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHH-----------------------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH-----------------------------HHHHHHH
Confidence 34779999999999999999999999999999999999888863 2333333
Q ss_pred HHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--H
Q psy6471 427 FHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--T 503 (635)
Q Consensus 427 ~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L 503 (635)
+... +..++..+..|+..+++ +...|..++..|+.+|..|+..+. |+.+|+.+ +
T Consensus 55 ~~~~--------------------v~~l~~~~~~L~~~~~~---~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l 111 (216)
T 1u5p_A 55 HEDR--------------------LKDLNSQADSLMTSSAF---DTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRL 111 (216)
T ss_dssp HHHH--------------------HHHHHHHHHHHHTCSSS---CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--------------------HHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 34566677777755332 234599999999999999999999 99999886 5
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy6471 504 KLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHP 583 (635)
Q Consensus 504 ~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~ 583 (635)
++|+++++++..||.++++.+.+.+ +|.|+++|+.++++|++|+. +|.++++.+..|...|+.|+..+||
T Consensus 112 ~qf~~~~~~~~~Wl~e~e~~~~~~~---~g~dl~~v~~ll~kh~~~~~-------el~~~~~~i~~l~~~g~~L~~~~~~ 181 (216)
T 1u5p_A 112 HQFFRDMDDEESWIKEKKLLVSSED---YGRDLTGVQNLRKKHKRLEA-------ELAAHEPAIQGVLDTGKKLSDDNTI 181 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCC---CCSSHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHhHHHHHHHHhcCcc---cCCCHHHHHHHHHHHHHHHH-------HHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999988765 69999999999999999999 9999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 584 AAKCIEAYMAAMQSQWAWLLQLALCLETHLKHAA 617 (635)
Q Consensus 584 ~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~ 617 (635)
+++.|+.++..|+.+|+.|.+.+..|+.+|++++
T Consensus 182 ~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al 215 (216)
T 1u5p_A 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215 (216)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999875
No 15
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.95 E-value=3.4e-26 Score=223.95 Aligned_cols=208 Identities=19% Similarity=0.315 Sum_probs=183.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHH
Q psy6471 348 TNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQF 427 (635)
Q Consensus 348 ~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~ 427 (635)
+++|+++++++..||.+++..+.+.++|+|+++|+.++++|+.+ +.+|...
T Consensus 2 l~qf~~~~~~~~~Wl~e~e~~l~~~~~g~dl~~v~~ll~kh~~~-----------------------------~~ei~~~ 52 (213)
T 1cun_A 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRL-----------------------------EAELAAH 52 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHH-----------------------------HHHHHHH
T ss_pred hHHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH-----------------------------HHHHHHh
Confidence 48899999999999999999999999999999999998888642 3333333
Q ss_pred HhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--HH
Q psy6471 428 HTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--TK 504 (635)
Q Consensus 428 ~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L~ 504 (635)
...+ ..+...+..|+..+++ +...|..++..|+.+|..|...+. |+.+|+.+ ++
T Consensus 53 ~~~v--------------------~~v~~~g~~L~~~~~~---~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~~~ 109 (213)
T 1cun_A 53 EPAI--------------------QSVLDTGKKLSDDNTI---GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQ 109 (213)
T ss_dssp HHHH--------------------HHHHHHHHHHHHTTCT---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--------------------HHHHHHHHHHHhcCCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 4455566677765443 345699999999999999999999 99999887 59
Q ss_pred HHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy6471 505 LFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHPA 584 (635)
Q Consensus 505 ~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~ 584 (635)
+|+.+++++..||.+++..+.+.+ +|.|+++++.++++|++|+. +|..+++.+..|...|+.|+..+||+
T Consensus 110 ~f~~~~~e~~~Wl~~~e~~l~~~~---~g~~~~~v~~ll~~h~~~~~-------el~~~~~~i~~l~~~~~~L~~~~~~~ 179 (213)
T 1cun_A 110 QFVANVEEEEAWINEKMTLVASED---YGDTLAAIQGLLKKHEAFET-------DFTVHKDRVNDVCANGEDLIKKNNHH 179 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCC---CCSSHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999998865 58999999999999999999 99999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 585 AKCIEAYMAAMQSQWAWLLQLALCLETHLKHAA 617 (635)
Q Consensus 585 ~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~ 617 (635)
++.|..++..|+.+|+.|...+..|+.+|+++.
T Consensus 180 ~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 180 VENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999875
No 16
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.95 E-value=1.9e-27 Score=234.80 Aligned_cols=203 Identities=26% Similarity=0.472 Sum_probs=154.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHH
Q psy6471 347 DTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQ 426 (635)
Q Consensus 347 ~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q 426 (635)
+...|.+.++++.+||.+++..+.+.+||+|+++|+.++++|+. ++.+|..
T Consensus 21 ea~~~~~~~~~l~~Wl~e~e~~l~s~d~g~Dl~~v~~ll~kh~~-----------------------------~e~ei~~ 71 (224)
T 2iak_A 21 EEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKN-----------------------------VHRAIEE 71 (224)
T ss_dssp HHHHHC-CHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHHHHHHH-----------------------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHH-----------------------------HHHHHHH
Confidence 34556666999999999999999999999999999998888864 3455555
Q ss_pred HHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q psy6471 427 FHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNATKL 505 (635)
Q Consensus 427 ~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L~~ 505 (635)
+...|+.+. ..+..+. + +....|..++..|..+|..|+..+. |+..|+ .+++
T Consensus 72 ~~~~v~~~~--------------------~~~~~~~----~--~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le-~l~~ 124 (224)
T 2iak_A 72 FESSLKEAK--------------------ISEIQMT----A--PLKLSYTDKLHRLESQYAKLLNTSRNQERHLD-TLHN 124 (224)
T ss_dssp THHHHHHHH--------------------HHGGGCC----T--THHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHH--------------------HHHHhcc----c--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 555554432 1111121 1 2345699999999999999999999 999997 8999
Q ss_pred HHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCh
Q psy6471 506 FTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHPAA 585 (635)
Q Consensus 506 F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~~ 585 (635)
|+++|+++++||.++++.+.+.++ |.|+.+|+.+++||++|++ ||.+++++++.|...|+.|+..|||++
T Consensus 125 F~~~~~~~~~Wi~eke~~~~s~d~---g~~l~~v~~L~~kh~~l~~-------el~~~~~~v~~v~~~g~~L~~~~h~~~ 194 (224)
T 2iak_A 125 FVTRATNELIWLNEKEESEVAYDW---SERNSSVARKKSYHAELMR-------ELEQKEESIKAVQEIAEQLLLENHPAR 194 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCC------------------CSSHHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc---CCCchhHHHHHHHHHHHHH-------HHHHhhHHHHHHHHHHHHHHHcCCCcH
Confidence 999999999999999999998774 8999999999999999999 999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 586 KCIEAYMAAMQSQWAWLLQLALCLETHLKH 615 (635)
Q Consensus 586 ~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~ 615 (635)
+.|..+++.|+.+|+.|.+++.+|+.+|++
T Consensus 195 ~~I~~~~~~l~~~W~~L~~l~~~R~~~L~~ 224 (224)
T 2iak_A 195 LTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999974
No 17
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.95 E-value=5.4e-26 Score=222.82 Aligned_cols=208 Identities=15% Similarity=0.229 Sum_probs=182.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHH
Q psy6471 349 NTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFH 428 (635)
Q Consensus 349 ~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~ 428 (635)
++|+++++++..||.+++..+.+.++|+|+++|+.++++|+.+ ..+|....
T Consensus 3 q~F~~~~~~l~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~-----------------------------~~ei~~~~ 53 (214)
T 1s35_A 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGI-----------------------------KDEIDGHQ 53 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHH-----------------------------HHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH-----------------------------HHHHHHhh
Confidence 7899999999999999999999999999999999998888742 23333333
Q ss_pred hhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--HHH
Q psy6471 429 TRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--TKL 505 (635)
Q Consensus 429 ~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L~~ 505 (635)
..+ ..+...+..|+..+ +.++...|+.++..|+..|..|...+. |+.+|+++ ++.
T Consensus 54 ~~~--------------------~~~~~~g~~L~~~~--~~~~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~l~~ 111 (214)
T 1s35_A 54 DSY--------------------QRVKESGEKVIQGQ--TDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQE 111 (214)
T ss_dssp HHH--------------------HHHHHHHHHHHTTC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH--------------------HHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 44555666676532 244566799999999999999999999 99999876 599
Q ss_pred HHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCh
Q psy6471 506 FTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHPAA 585 (635)
Q Consensus 506 F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~~ 585 (635)
|+++|+++..||.+++..+.+.+ +|.|+++|+.+++||++|+. +|.++.+++..+...|+.|+..+||++
T Consensus 112 F~~~~~~~~~Wl~~~E~~l~~~~---~g~~~~~v~~llkkh~~f~~-------~l~~~~~~i~~l~~~a~~L~~~~h~~~ 181 (214)
T 1s35_A 112 FQKDAKQAEAILSNQEYTLAHLE---PPDSLEAAEAGIRKFEDFLG-------SMENNRDKVLSPVDSGNKLVAEGNLYS 181 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCC---CCSSHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTH
T ss_pred HHHHHHHHHHHHHHHHHHHhccc---CCCCHHHHHHHHHHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHcCCCCH
Confidence 99999999999999999998865 58999999999999999999 999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 586 KCIEAYMAAMQSQWAWLLQLALCLETHLKHAA 617 (635)
Q Consensus 586 ~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~ 617 (635)
+.|..++..|..+|+.|...+.+|...|++++
T Consensus 182 ~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 182 DKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998764
No 18
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.94 E-value=1.1e-26 Score=271.12 Aligned_cols=222 Identities=21% Similarity=0.384 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHHHHHhcCC-CcCC
Q psy6471 101 VNEYCDLASSLHLWMREKTAYMQDRNFPSTLIEMKKLAADSARFRTEEVPPRQRDKQRLQHIFQDLTKYFEDVGE-VDID 179 (635)
Q Consensus 101 ~~~y~~~~~~Ll~WI~~~~~~l~~~~~~~sl~~vq~~l~~~~~f~~~E~~~~~~ek~~le~l~~~l~~~~~~~~~-~~~~ 179 (635)
.-+|.+++.+++.||..+...+..+.+++++.+++.++..|+.|++.++||+.+++++++++++.++++++..++ ++.|
T Consensus 768 ~iQY~~~a~~L~~WIr~kqa~l~~r~~~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~iqtklrl~~r~~~~p 847 (1010)
T 1g8x_A 768 KSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVA 847 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 458999999999999999999999999999999999999999999999999999999999999999999988887 4566
Q ss_pred C-CCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hh
Q psy6471 180 P-ELHIDVIERNWSRLLAAHQEKDSILQDEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KH 257 (635)
Q Consensus 180 ~-~~~~~~i~~~W~~L~~~~~~r~~~L~~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lk 257 (635)
| ++.+.+|+++|..|+.++++|+.+|+.++.||+++++++++|.++|+.+++||.+++..++++++|. ++..|++ ++
T Consensus 848 ~~gl~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d~g~-dL~~Vqal~K 926 (1010)
T 1g8x_A 848 PAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGD-SITAVQAKLK 926 (1010)
T ss_dssp CTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCCSCC-STTTTGGGTT
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-cHHHHHHHHH
Confidence 6 7899999999999999999999999999999999999999999999999999999999999999984 8999998 79
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCChhhHHHHHHHHH-HHHHHHHHHHHhcccCccccC
Q psy6471 258 NVDVLEHDLRQAEENIN-TLFSDVQTLREGRYPQASDLHKRVQKLH-QRWVALRSLLHSRLVSPLASM 323 (635)
Q Consensus 258 kh~~le~di~a~~~~v~-~l~~~a~~L~~~~~~~~~~I~~r~~~L~-~~w~~L~~~~~~R~~~l~~~l 323 (635)
||++|++||.+++++|. .|.+.|++|.+++|+++++|..|++.|. ++|+.|.+++..|+.+|.+++
T Consensus 927 Khea~e~dl~a~e~ri~~~l~~~a~eL~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~l 994 (1010)
T 1g8x_A 927 NLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAEL 994 (1010)
T ss_dssp SHHHHTTTTTHHHHTHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999996 899999999999986654433
No 19
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.94 E-value=1.5e-25 Score=263.97 Aligned_cols=340 Identities=12% Similarity=0.163 Sum_probs=265.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHH-H---HHHHHHH-HHHHHHHhcCCC
Q psy6471 215 LQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQ-A---EENINTL-FSDVQTLREGRY 288 (635)
Q Consensus 215 l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a-~---~~~v~~l-~~~a~~L~~~~~ 288 (635)
.+.+...|.+.+..+..||.+++..+.+.++| .++..++. +++|..|...... . ...++.+ ...+..+...+.
T Consensus 248 ~e~l~~~y~~~~~el~~Wi~~~~~~l~~~~~~-~~l~~v~~~l~~~~~~~~~~k~~~~~e~~~le~~~~~l~~~l~~~~~ 326 (863)
T 1sjj_A 248 NEQLMEDYEKLASDLLEWIRRTIPWLENRAPE-NTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNR 326 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGSSCCCCC-SSHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHTTTHHHHHTTTTSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcC-CCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 45556789999999999999999999998887 47788886 8999999886542 1 1233322 344555554443
Q ss_pred CC-hhhHHHHHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhh---hHhhhhhhhhhhHHHHHHHHHHHHHHH
Q psy6471 289 PQ-ASDLHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQT---RTVMETRLVDTNTHFRALQEAIEWVKN 364 (635)
Q Consensus 289 ~~-~~~I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~---~~~le~~~~~~~~f~~~~~e~~~Wl~e 364 (635)
+. ...+..++..|+.+|+.|......|.. .|..+ ++.|+. .+++|.+++.++..||.+
T Consensus 327 ~~~~~~~~~~~~~i~~~w~~L~~~~~~r~~---------------~l~~~~~R~~~Le~---l~~~F~~~~~~~~~Wl~~ 388 (863)
T 1sjj_A 327 PAFMPSEGKMVSDINNAWGGLEQAEKGYEE---------------WLLNEIRRLERLDH---LAEKFRQKASIHESWTDG 388 (863)
T ss_dssp CCCCCSTTSCGGGHHHHHHHHHHHHTTTHH---------------HHHHHHEEHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 32 233456678899999999998877643 12211 123443 247899999999999999
Q ss_pred HHHhhhhcccCC-ChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcc
Q psy6471 365 KLAQIQEADYGS-DLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMG 443 (635)
Q Consensus 365 ~~~~l~s~~~g~-dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g 443 (635)
++..+.+.++|. |+++|+.++++|+++ ..++......
T Consensus 389 ~e~~l~~~~~g~~dl~~v~~ll~kh~~f-----------------------------~~el~~~~~~------------- 426 (863)
T 1sjj_A 389 KEAMLQQKDYETATLSEIKALLKKHEAF-----------------------------ESDLAAHQDR------------- 426 (863)
T ss_dssp HHHHHHSCTTTSSCHHHHHHHHHHHHHH-----------------------------HHHHTTHHHH-------------
T ss_pred HHHHhhcccccCCCHHHHHHHHHHHHHH-----------------------------HHHHHHHHHH-------------
Confidence 999999999998 999999999888743 2222222222
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--H--------HHHHHHHH
Q psy6471 444 AAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNAT--K--------LFTEKASN 512 (635)
Q Consensus 444 ~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L--~--------~F~~~~~e 512 (635)
++.+...++.|+..+++ +...|..++..|..+|+.|..++. |+.+|++++ + +|..++++
T Consensus 427 -------v~~l~~~~~~L~~~~~~---~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f~~~a~~ 496 (863)
T 1sjj_A 427 -------VEQIAAIAQELNELDYY---DSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAP 496 (863)
T ss_dssp -------HHHHHHHHHHHHHTCCT---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -------HHHHHHHHHHHHhCCcc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666654433 345699999999999999999999 999998764 4 89999999
Q ss_pred HHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHh-------cCCCCh
Q psy6471 513 LQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALIL-------QHHPAA 585 (635)
Q Consensus 513 ~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~-------~~h~~~ 585 (635)
+.+||.+++..+.+.+ .|.|++.++.++++|+.|+. +|.+++..+..+...+++|.. .+++..
T Consensus 497 ~~~Wl~~~e~~l~~~~---~g~dl~~ve~ll~kh~~~~~-------~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 566 (863)
T 1sjj_A 497 FNNWMEGAMEDLQDTF---IVHTIEEIQGLTTAHEQFKA-------TLPDADKERQAILGIHNEVSKIVQTYHVNMAGTN 566 (863)
T ss_dssp THHHHHHHHHHHHCCC---CCSSSGGGHHHHHHHHHHHT-------THHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCC
T ss_pred HHHHHHHHHHHhcchH---hhccHHHHHHHHHHHHHHHh-------HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Confidence 9999999999999866 59999999999999999999 999999999999999988866 234456
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHhhhC
Q psy6471 586 KCIEAYMAAMQSQWAWLLQLALCLETHLKHAAY--------YHQFWREMKDAETWINK 635 (635)
Q Consensus 586 ~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~~--------~~qf~~~~~e~~~Wl~e 635 (635)
+.+..++..|..+|+.|.+.+..|+.+|++++. +++|..+++++.+||.+
T Consensus 567 ~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~F~~~a~~~~~Wi~e 624 (863)
T 1sjj_A 567 PYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQT 624 (863)
T ss_dssp SSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 677788999999999999999999999999884 68888999999999974
No 20
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.93 E-value=5.2e-25 Score=216.48 Aligned_cols=211 Identities=17% Similarity=0.192 Sum_probs=159.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHH
Q psy6471 348 TNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQF 427 (635)
Q Consensus 348 ~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~ 427 (635)
+++|+++++++..||.+++..+.+.++|.|+..|+.++++|.. |
T Consensus 3 L~~f~~~~~~l~~Wl~~ke~~l~~~~~g~dl~~v~~l~~k~~~------------------------------------f 46 (218)
T 3edu_A 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRD------------------------------------F 46 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHH------------------------------------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHHHHHHH------------------------------------H
Confidence 5899999999999999999999999999999999999888864 2
Q ss_pred HhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--HH
Q psy6471 428 HTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--TK 504 (635)
Q Consensus 428 ~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L~ 504 (635)
...+... ..+ .+..++..+.+|+..++|. ...|+.+++.|+.+|+.|..++. |+..|+.+ ++
T Consensus 47 ~~el~~~-------~~~-----~v~~v~~~~~~L~~~~~~~---~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~ 111 (218)
T 3edu_A 47 ARETGAI-------GQE-----RVDNVNAFIERLIDAGHSE---AATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLH 111 (218)
T ss_dssp HHHHHHH-------HHH-----HHHHHHHHHHHHHHTTCTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-------hhH-----HHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233210 001 1456777888888766553 34699999999999999999999 99999876 59
Q ss_pred HHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q psy6471 505 LFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHP- 583 (635)
Q Consensus 505 ~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~- 583 (635)
+|+++|+++..||.+++..+. . |+|.|+.+++.++++|+.|+. +|.++++.|..+...|..|+..+++
T Consensus 112 ~F~~~~~e~~~Wl~ek~~~l~-~---~~g~dl~~v~~l~~~h~~~e~-------dL~~~~~~v~~l~~~a~~L~~~~~~~ 180 (218)
T 3edu_A 112 RYFYTGAEILGLIDEKHRELP-E---DVGLDASTAESFHRVHTAFER-------ELHLLGVQVQQFQDVATRLQTAYAGE 180 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHCCC-----------------CCSHHHHHH-------HHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHhhCC-C---ccCCCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHCCch
Confidence 999999999999999999984 3 469999999999999999999 9999999999999999999987653
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 584 AAKCIEAYMAAMQSQWAWLLQLALCLETHLKHAAYYH 620 (635)
Q Consensus 584 ~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~~~~ 620 (635)
.++.|..+++.|+.+|..|...+..|+.+|++++.++
T Consensus 181 ~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~ 217 (218)
T 3edu_A 181 KAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKF 217 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5789999999999999999999999999999998765
No 21
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.92 E-value=7.5e-24 Score=212.67 Aligned_cols=233 Identities=18% Similarity=0.308 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhh-cccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6471 207 DEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEAR-RLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLR 284 (635)
Q Consensus 207 ~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~-g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~ 284 (635)
+++.|++++++++.+|.+++..+++||.+++..+.++++ | .++..|++ ++||++|+++|.+++++|..|...|+.|+
T Consensus 4 ~~~~R~~kLe~l~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g-~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~ 82 (250)
T 1quu_A 4 NEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYES-ASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELN 82 (250)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHCCCCSS-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356799999999999999999999999999999998888 6 58888997 89999999999999999999999999999
Q ss_pred cCCCCChhhHHHHHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhh-HHHHHHHHHHHHHH
Q psy6471 285 EGRYPQASDLHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTN-THFRALQEAIEWVK 363 (635)
Q Consensus 285 ~~~~~~~~~I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~-~f~~~~~e~~~Wl~ 363 (635)
..+|++++.|..+++.|..+|+.|...+..|+. .|+++....+. +-.+. +|+.+++++..||.
T Consensus 83 ~~~~~~~~~I~~r~~~l~~~W~~L~~~~~~R~~---------------~L~~~l~~~~~-~d~l~~qF~~~a~~~~~Wl~ 146 (250)
T 1quu_A 83 ELDYHDAVNVNDRCQKICDQWDRLGTLTQKRRE---------------ALERMEKLLET-IDQLHLEFAKRAAPFNNWME 146 (250)
T ss_dssp HTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHH-HHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999999964 45554322110 00112 89999999999999
Q ss_pred HHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcc
Q psy6471 364 NKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMG 443 (635)
Q Consensus 364 e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g 443 (635)
+++..+.+.++|+|+.+|+.++++|..+ ...+..+...+..
T Consensus 147 ~~e~~l~~~~~~~d~e~v~~ll~~h~~~-----------------------------~~~l~~~~~~~~~---------- 187 (250)
T 1quu_A 147 GAMEDLQDMFIVHSIEEIQSLITAHEQF-----------------------------KATLPEADGERQS---------- 187 (250)
T ss_dssp HHHTTTTCCCCCCSTTTHHHHHHHHHHH-----------------------------HTHHHHHHHHHHH----------
T ss_pred HHHHHhccccccCCHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHH----------
Confidence 9999999999999999999999888743 2222222222211
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCC----CChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q psy6471 444 AAQRNAIRKALNEDADKLLEEGDP----SDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNATKL 505 (635)
Q Consensus 444 ~~~~~~~~~~L~~~a~~l~~~~~~----~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L~~ 505 (635)
+..+...+++++..+++ ..|. |..++..|..+|+.|+.++. |+..|++++..
T Consensus 188 -------i~~l~~~~~~l~~~~~~~~~~~~~~---~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~ 244 (250)
T 1quu_A 188 -------IMAIQNEVEKVIQSYNIRISSSNPY---STVTMDELRTKWDKVKQLVPIRDQSLQEELAR 244 (250)
T ss_dssp -------HHHHHHHHHHHHHHSCTTSCCSCTT---CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHhcccccCCCCCc---ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23344455556555543 2332 56788999999999999999 99999887643
No 22
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.92 E-value=2.1e-23 Score=204.65 Aligned_cols=208 Identities=18% Similarity=0.322 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHH
Q psy6471 220 EKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRV 298 (635)
Q Consensus 220 ~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~ 298 (635)
++|.+.+..+..||.+++..+.+.++|. ++..|+. +++|+.|+++|.+++++|..+...|+.|...+|++++.|..++
T Consensus 6 ~~F~~~~~~l~~Wl~~~e~~l~~~~~g~-dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~ 84 (216)
T 1u5p_A 6 QNFNTGIKDFDFWLSEVEALLASEDYGK-DLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKR 84 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 7899999999999999999999988884 7888887 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCCh
Q psy6471 299 QKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDL 378 (635)
Q Consensus 299 ~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl 378 (635)
..|+.+|+.|+..+..|+. .|+++. .+++|+++++++..||.+++..+.+.++|+|+
T Consensus 85 ~~l~~~w~~L~~~~~~R~~---------------~Le~~~--------~l~qf~~~~~~~~~Wl~e~e~~~~~~~~g~dl 141 (216)
T 1u5p_A 85 ETINGRFQRIKSMAAARRA---------------KLNESH--------RLHQFFRDMDDEESWIKEKKLLVSSEDYGRDL 141 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHhHHHHHHHHhcCcccCCCH
Confidence 9999999999999999963 455542 56899999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q psy6471 379 QGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDA 458 (635)
Q Consensus 379 ~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a 458 (635)
++|+.++++|+.+ ..+|..+... +..+...+
T Consensus 142 ~~v~~ll~kh~~~-----------------------------~~el~~~~~~--------------------i~~l~~~g 172 (216)
T 1u5p_A 142 TGVQNLRKKHKRL-----------------------------EAELAAHEPA--------------------IQGVLDTG 172 (216)
T ss_dssp HHHHHHHHHHHHH-----------------------------HHHHHHHHHH--------------------HHHHHHHH
T ss_pred HHHHHHHHHHHHH-----------------------------HHHHHHhHHH--------------------HHHHHHHH
Confidence 9999998888742 3333333333 34555667
Q ss_pred HHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q psy6471 459 DKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNAT 503 (635)
Q Consensus 459 ~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L 503 (635)
+.|+..+++.. ..|+.++..|+.+|+.|+..+. |+..|++++
T Consensus 173 ~~L~~~~~~~~---~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al 215 (216)
T 1u5p_A 173 KKLSDDNTIGK---EEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215 (216)
T ss_dssp HHHHHTCSSCS---HHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHhcCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77776555443 3599999999999999999999 999997664
No 23
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.92 E-value=1.6e-23 Score=205.82 Aligned_cols=202 Identities=18% Similarity=0.297 Sum_probs=155.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHH
Q psy6471 347 DTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQ 426 (635)
Q Consensus 347 ~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q 426 (635)
.+++|+.++.++.+||.+++..+.+.++|.|+++|+.++.+|+.+ +.+|..
T Consensus 14 ~~~~F~~~~~~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l-----------------------------~~ei~~ 64 (218)
T 3fb2_A 14 DLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEH-----------------------------RTEIDA 64 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHH-----------------------------HHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHH-----------------------------HHHHHH
Confidence 678999999999999999999999999999999999998888642 222222
Q ss_pred HHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--H
Q psy6471 427 FHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--T 503 (635)
Q Consensus 427 ~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L 503 (635)
.... +..+...+..|+..+++. ...|+.++..|+..|+.|...+. |+.+|+++ +
T Consensus 65 ~~~~--------------------~~~~~~~G~~Ll~~~~~~---~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~l 121 (218)
T 3fb2_A 65 RAGT--------------------FQAFEQFGQQLLAHGHYA---SPEIKQKLDILDQERADLEKAWVQRRMMLDQCLEL 121 (218)
T ss_dssp THHH--------------------HHHHHHHHHHHHHTTCTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHH--------------------HHHHHHHHHHHHhCCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 234455566666654433 34699999999999999999999 99999876 5
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy6471 504 KLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHHP 583 (635)
Q Consensus 504 ~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~ 583 (635)
+.|.++++++..||.+++..+.+.+ +|.+++.++.++++|++|+. +|.++..++..+...|+.|+..+||
T Consensus 122 ~~F~~d~~~~~~WL~~~e~~L~~~~---~g~s~~~ve~ll~~h~~f~~-------~l~~~~~~v~~l~~~~~~L~~~~h~ 191 (218)
T 3fb2_A 122 QLFHRDCEQAENWMAAREAFLNTED---KGDSLDSVEALIKKHEDFDK-------AINVQEEKIAALQAFADQLIAAGHY 191 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC----------------------CHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC---CCCCHHHHHHHHHHHHHHHH-------HHHhhHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999998865 58899999999999999999 9999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 584 AAKCIEAYMAAMQSQWAWLLQLALCLE 610 (635)
Q Consensus 584 ~~~~I~~~l~~L~~~W~~L~~~~~~R~ 610 (635)
+++.|..++..|+.+|+.|.+.+.+|+
T Consensus 192 ~~~~I~~~~~~l~~rW~~l~~~l~~rr 218 (218)
T 3fb2_A 192 AKGDISSRRNEVLDRWRRLKAQMIEKR 218 (218)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999988774
No 24
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.90 E-value=3.7e-22 Score=195.21 Aligned_cols=207 Identities=15% Similarity=0.329 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHH
Q psy6471 220 EKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRV 298 (635)
Q Consensus 220 ~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~ 298 (635)
.+|.+++..+..||.+++..+.+.++|. ++..|+. +++|+.|+.+|.+++++|..+...|+.|+..+|++++.|..++
T Consensus 3 ~qf~~~~~~~~~Wl~e~e~~l~~~~~g~-dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~ 81 (213)
T 1cun_A 3 HQFFRDMDDEESWIKEKKLLVSSEDYGR-DLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRL 81 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHhcCcccCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 7899999999999999999999988884 7888887 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCCh
Q psy6471 299 QKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDL 378 (635)
Q Consensus 299 ~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl 378 (635)
..|+.+|+.|...+..|+. .|+++ + .+++|+.+++++..||.+++..+.+.++|+|+
T Consensus 82 ~~l~~~w~~L~~~~~~R~~---------------~Le~~-------~-~~~~f~~~~~e~~~Wl~~~e~~l~~~~~g~~~ 138 (213)
T 1cun_A 82 AQFVDHWKELKQLAAARGQ---------------RLEES-------L-EYQQFVANVEEEEAWINEKMTLVASEDYGDTL 138 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------------HHHHH-------H-HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHH---------------HHHHH-------H-HHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCH
Confidence 9999999999999999963 45444 2 56899999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q psy6471 379 QGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDA 458 (635)
Q Consensus 379 ~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a 458 (635)
++|+.++++|..+ ..++..+...| ..|...+
T Consensus 139 ~~v~~ll~~h~~~-----------------------------~~el~~~~~~i--------------------~~l~~~~ 169 (213)
T 1cun_A 139 AAIQGLLKKHEAF-----------------------------ETDFTVHKDRV--------------------NDVCANG 169 (213)
T ss_dssp HHHHHHHHHHHHH-----------------------------HHHHHHHHHHH--------------------HHHHHHH
T ss_pred HHHHHHHHHHHHH-----------------------------HHHHHHHHHHH--------------------HHHHHHH
Confidence 9999998888642 33333333333 4555666
Q ss_pred HHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q psy6471 459 DKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA 502 (635)
Q Consensus 459 ~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~ 502 (635)
+.|+..+++ +...|..++..|+.+|..|...+. |+..|+++
T Consensus 170 ~~L~~~~~~---~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a 211 (213)
T 1cun_A 170 EDLIKKNNH---HVENITAKMKGLKGKVSDLEKAAAQRKAKLDEN 211 (213)
T ss_dssp HHHHHHCCT---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 777765444 345699999999999999999999 99999765
No 25
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.90 E-value=1e-22 Score=200.02 Aligned_cols=209 Identities=11% Similarity=0.202 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCChhhHHHH
Q psy6471 220 EKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQ-AEENINTLFSDVQTLREGRYPQASDLHKR 297 (635)
Q Consensus 220 ~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a-~~~~v~~l~~~a~~L~~~~~~~~~~I~~r 297 (635)
.+|.++|..+..||.+++..+.+.++| .++..|+. +++|+.|+.++.+ ++++|..++..|+.|+..+||+++.|..+
T Consensus 4 ~~f~~~~~~l~~Wl~~ke~~l~~~~~g-~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~ 82 (218)
T 3edu_A 4 FQLKRETDDLEQWISEKELVASSPEMG-QDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEW 82 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccC-CCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 689999999999999999999988888 47888887 8999999999998 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q psy6471 298 VQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSD 377 (635)
Q Consensus 298 ~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~d 377 (635)
++.|+.+|+.|...+..|+. .|+.+. .+++|+++++++..||.+++..+ +.++|.|
T Consensus 83 ~~~l~~~W~~L~~~~~~R~~---------------~L~~a~--------~~~~F~~~~~e~~~Wl~ek~~~l-~~~~g~d 138 (218)
T 3edu_A 83 KDGLNEMWADLLELIDTRMQ---------------LLAASY--------DLHRYFYTGAEILGLIDEKHREL-PEDVGLD 138 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHCC-C------
T ss_pred HHHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHhhC-CCccCCC
Confidence 99999999999999999963 444432 67899999999999999999999 5889999
Q ss_pred hhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6471 378 LQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNED 457 (635)
Q Consensus 378 l~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~ 457 (635)
+++|+.++++|.. ++.+|..+... +..|...
T Consensus 139 l~~v~~l~~~h~~-----------------------------~e~dL~~~~~~--------------------v~~l~~~ 169 (218)
T 3edu_A 139 ASTAESFHRVHTA-----------------------------FERELHLLGVQ--------------------VQQFQDV 169 (218)
T ss_dssp -------CCSHHH-----------------------------HHHHHHHHHHH--------------------HHHHHHH
T ss_pred HHHHHHHHHHHHH-----------------------------HHHHHHHHHHH--------------------HHHHHHH
Confidence 9999998888864 23333333333 3556677
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q psy6471 458 ADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNATK 504 (635)
Q Consensus 458 a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L~ 504 (635)
|..|++.+. .++...|..++..|..+|+.|...+. |+.+|++++-
T Consensus 170 a~~L~~~~~--~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~ 215 (218)
T 3edu_A 170 ATRLQTAYA--GEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTAD 215 (218)
T ss_dssp HHHHHTTCC--HHHHHHHHHHHHHHHHHHHHHHHHTC-----------
T ss_pred HHHHHHHCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777775432 12456799999999999999999999 9999987753
No 26
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.89 E-value=6.2e-22 Score=198.66 Aligned_cols=212 Identities=15% Similarity=0.252 Sum_probs=176.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccc-CCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHH
Q psy6471 348 TNTHFRALQEAIEWVKNKLAQIQEADY-GSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQ 426 (635)
Q Consensus 348 ~~~f~~~~~e~~~Wl~e~~~~l~s~~~-g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q 426 (635)
+++|++++.++.+||.+++..+.+.++ |+|+.+|+.++++|.++ ..++..
T Consensus 16 ~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~-----------------------------~~el~~ 66 (250)
T 1quu_A 16 AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAF-----------------------------ESDLAA 66 (250)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHH-----------------------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHH-----------------------------HHHHHH
Confidence 478999999999999999999999999 99999999999888742 333333
Q ss_pred HHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--
Q psy6471 427 FHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNAT-- 503 (635)
Q Consensus 427 ~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L-- 503 (635)
+...+ ..+...++.|+..+++ +...|..++..|..+|+.|...+. |+.+|++++
T Consensus 67 ~~~~v--------------------~~l~~~~~~L~~~~~~---~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~ 123 (250)
T 1quu_A 67 HQDRV--------------------EQIAAIAQELNELDYH---DAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKL 123 (250)
T ss_dssp HHHHH--------------------HHHHHHHHHHHHTTCT---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--------------------HHHHHHHHHHHhccCc---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333 4555666677665443 344699999999999999999999 999998864
Q ss_pred H--------HHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHH---HHHHHHHH
Q psy6471 504 K--------LFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKRE---IQFSAVQD 572 (635)
Q Consensus 504 ~--------~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~---~~~~~v~~ 572 (635)
+ +|+.+++++..||.+++..+.+.+ .|.|+++++.++++|+.|.. ++...+ +.+..+..
T Consensus 124 ~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~~---~~~d~e~v~~ll~~h~~~~~-------~l~~~~~~~~~i~~l~~ 193 (250)
T 1quu_A 124 LETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMF---IVHSIEEIQSLITAHEQFKA-------TLPEADGERQSIMAIQN 193 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC---CCCSTTTHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc---ccCCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 5 999999999999999999998865 58999999999999999986 555554 55556677
Q ss_pred HHHHHHhcCCC----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 573 RGEALILQHHP----AAKCIEAYMAAMQSQWAWLLQLALCLETHLKHAAYYHQ 621 (635)
Q Consensus 573 ~g~~L~~~~h~----~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~~~~q 621 (635)
.++.|+..+|+ ..+.|..++..|+.+|..|...+..|+..|++++..++
T Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~q~ 246 (250)
T 1quu_A 194 EVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQH 246 (250)
T ss_dssp HHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77888888775 57789999999999999999999999999999987553
No 27
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.89 E-value=1.3e-21 Score=191.42 Aligned_cols=209 Identities=12% Similarity=0.171 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCChhhHHH
Q psy6471 219 AEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGR-YPQASDLHK 296 (635)
Q Consensus 219 a~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~-~~~~~~I~~ 296 (635)
+++|.+++..+..||.+++..+.+.++|. ++..++. +++|..|..+|.+++++|..+...|+.|...+ +++...|..
T Consensus 2 ~q~F~~~~~~l~~Wl~~~~~~l~~~~~~~-dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~ 80 (214)
T 1s35_A 2 EQAFLQDLDDFQAWLSITQKAVASEDMPE-SLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQ 80 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 36899999999999999999999888874 7888887 89999999999999999999999999999875 456889999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCC
Q psy6471 297 RVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGS 376 (635)
Q Consensus 297 r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~ 376 (635)
++..|+.+|+.|...+..|+. .|+++. +++.|+++++++.+||.+++..+.+.++|.
T Consensus 81 ~l~~L~~~w~~L~~~~~~r~~---------------~L~~~l--------~l~~F~~~~~~~~~Wl~~~E~~l~~~~~g~ 137 (214)
T 1s35_A 81 RLEGLDTGWDALGRMWESRSH---------------TLAQCL--------GFQEFQKDAKQAEAILSNQEYTLAHLEPPD 137 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 999999999999999999963 455542 578999999999999999999999999999
Q ss_pred ChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy6471 377 DLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNE 456 (635)
Q Consensus 377 dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~ 456 (635)
|+++|+.++++|..+ ..++..+... +..|..
T Consensus 138 ~~~~v~~llkkh~~f-----------------------------~~~l~~~~~~--------------------i~~l~~ 168 (214)
T 1s35_A 138 SLEAAEAGIRKFEDF-----------------------------LGSMENNRDK--------------------VLSPVD 168 (214)
T ss_dssp SHHHHHHHHHHHHHH-----------------------------HHHHHHHHHH--------------------HHHHHH
T ss_pred CHHHHHHHHHHHHHH-----------------------------HHHHHHhHHH--------------------HHHHHH
Confidence 999999999988743 2222222222 355667
Q ss_pred HHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q psy6471 457 DADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNAT 503 (635)
Q Consensus 457 ~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L 503 (635)
.|+.|+..+++ ....|..++..|..+|+.|...+. |+..|++++
T Consensus 169 ~a~~L~~~~h~---~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 169 SGNKLVAEGNL---YSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHTTCT---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77888876554 345699999999999999999999 999997654
No 28
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.88 E-value=8e-26 Score=264.17 Aligned_cols=217 Identities=21% Similarity=0.381 Sum_probs=200.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHHHHHhcCC-CcCC
Q psy6471 101 VNEYCDLASSLHLWMREKTAYMQDRNFPSTLIEMKKLAADSARFRTEEVPPRQRDKQRLQHIFQDLTKYFEDVGE-VDID 179 (635)
Q Consensus 101 ~~~y~~~~~~Ll~WI~~~~~~l~~~~~~~sl~~vq~~l~~~~~f~~~E~~~~~~ek~~le~l~~~l~~~~~~~~~-~~~~ 179 (635)
..+|++++.+|+.||+.+...+..+.+++++..+|..+..|..|+..++||+..+++++++++.+++++++..++ ++.|
T Consensus 760 ~~eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp~~~ek~rLeal~~~iqtkLrl~~~~~y~p 839 (995)
T 2ycu_A 760 KSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVA 839 (995)
T ss_dssp HHHHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHHCSSSCCCCCSSCSSTHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Confidence 358999999999999999998888899999999999999999999999999999999999999998887765665 3345
Q ss_pred C-CCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hh
Q psy6471 180 P-ELHIDVIERNWSRLLAAHQEKDSILQDEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KH 257 (635)
Q Consensus 180 ~-~~~~~~i~~~W~~L~~~~~~r~~~L~~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lk 257 (635)
| ++.+.+|+++|..|..++++|+.+|+.++.|+++|+++|++|.++|+.+++||.+++..+.++++|. ++..|++ ++
T Consensus 840 ~~gl~~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s~d~g~-dl~~vqallk 918 (995)
T 2ycu_A 840 PAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGD-SITAVQAKLK 918 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHHHTHHH-HHHHHHHHHH
T ss_pred chhccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-CHHHHHHHHH
Confidence 4 6789999999999999999999999999999999999999999999999999999999999999985 7899998 79
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCChhhHHHHHHHH-HHHHHHHHHHHHhcccC
Q psy6471 258 NVDVLEHDLRQAEENIN-TLFSDVQTLREGRYPQASDLHKRVQKL-HQRWVALRSLLHSRLVS 318 (635)
Q Consensus 258 kh~~le~di~a~~~~v~-~l~~~a~~L~~~~~~~~~~I~~r~~~L-~~~w~~L~~~~~~R~~~ 318 (635)
||++|++||.++++++. .|.+.|+.|.+++|+++++|..|++.| .++|+.|++.+..|+.+
T Consensus 919 Khea~e~dl~a~e~ri~~~l~~~a~~L~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~ 981 (995)
T 2ycu_A 919 NLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNT 981 (995)
T ss_dssp HHHHHHHHHHHTTTCSCSSHHHHHHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 999999999999999999999999999 69999999999999764
No 29
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.86 E-value=2.9e-22 Score=197.50 Aligned_cols=200 Identities=12% Similarity=0.174 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHH
Q psy6471 219 AEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKR 297 (635)
Q Consensus 219 a~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r 297 (635)
|..|.+.+..+++||.+++..+.+.++|. ++..|+. +++|+.|+++|.+++++|..+...+..+.. +....|..+
T Consensus 22 a~~~~~~~~~l~~Wl~e~e~~l~s~d~g~-Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~---~~~~~i~~~ 97 (224)
T 2iak_A 22 EEVNMKFVQDLLNWVDEMQVQLDRTEWGS-DLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTA---PLKLSYTDK 97 (224)
T ss_dssp HHHHC-CHHHHHHHHHHHHHHHHTCCCCS-SHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCT---THHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---chhHHHHHH
Confidence 67888889999999999999999999995 7899997 899999999999999999999877665542 456789999
Q ss_pred HHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q psy6471 298 VQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSD 377 (635)
Q Consensus 298 ~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~d 377 (635)
+..|..+|..|+..+..|+. .| + .+++|+++++++..||.+++..+.+.+||.|
T Consensus 98 ~~~l~~~~~~L~~~~~~R~~---------------~L-------e----~l~~F~~~~~~~~~Wi~eke~~~~s~d~g~~ 151 (224)
T 2iak_A 98 LHRLESQYAKLLNTSRNQER---------------HL-------D----TLHNFVTRATNELIWLNEKEESEVAYDWSER 151 (224)
T ss_dssp HHHHHHHHHHTTTHHHHHHH---------------HH-------H----HHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHH---------------HH-------H----HHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 99999999999999999963 22 2 4689999999999999999999999999999
Q ss_pred hhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6471 378 LQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNED 457 (635)
Q Consensus 378 l~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~ 457 (635)
+++|+.++++|+.+ ..+|...... +..+...
T Consensus 152 l~~v~~L~~kh~~l-----------------------------~~el~~~~~~--------------------v~~v~~~ 182 (224)
T 2iak_A 152 NSSVARKKSYHAEL-----------------------------MRELEQKEES--------------------IKAVQEI 182 (224)
T ss_dssp ----------CSSH-----------------------------HHHHHHHHHH--------------------HHHHHHH
T ss_pred chhHHHHHHHHHHH-----------------------------HHHHHHhhHH--------------------HHHHHHH
Confidence 99999998888742 3333333333 3456667
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q psy6471 458 ADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMK 500 (635)
Q Consensus 458 a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le 500 (635)
|+.|+..++|. ...|+.+++.|...|+.|..++. |...|+
T Consensus 183 g~~L~~~~h~~---~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~ 223 (224)
T 2iak_A 183 AEQLLLENHPA---RLTIEAYRAAMQTQWSWILQLCQCVEQHIQ 223 (224)
T ss_dssp HHHHHHTTCTT---HHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHcCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77787765543 44599999999999999999999 999885
No 30
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.84 E-value=2.2e-20 Score=173.73 Aligned_cols=133 Identities=18% Similarity=0.308 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHH
Q psy6471 474 RLRREMDEVNRLFDEFERRAR-AEEDMKNA--TKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFE 550 (635)
Q Consensus 474 ~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~ 550 (635)
.|+.+++.|..+|..|...+. |+.+|+++ |++|+++|+++..||.+++..+.+.+ +.|+.+|+.+++||++|+
T Consensus 26 ~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~~lq~F~~d~~el~~Wi~ek~~~a~~~~----~~d~~~v~~ll~kH~afe 101 (161)
T 3lbx_A 26 EIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKS----YEDPTNIQGKYQKHQSLE 101 (161)
T ss_dssp TGGGHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS----CCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC----cCCHHHHHHHHHHHHHHH
Confidence 489999999999999999999 99999987 59999999999999999999887644 479999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 551 STLKNLMSDLEKREIQFSAVQDRGEALILQHHPAAKCIEAYMAAMQSQWAWLLQLALCLETHLKHAA 617 (635)
Q Consensus 551 ~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~ 617 (635)
+ ||.++++++..|...|+.|+..+|++++.|+.+++.|+.+|+.|...+..|+.+|.+|+
T Consensus 102 ~-------El~a~~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eAl 161 (161)
T 3lbx_A 102 A-------EVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161 (161)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred H-------HHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9 99999999999999999999999999999999999999999999999999999999873
No 31
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.83 E-value=4.1e-20 Score=169.84 Aligned_cols=131 Identities=16% Similarity=0.304 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHH
Q psy6471 473 RRLRREMDEVNRLFDEFERRAR-AEEDMKNA--TKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDF 549 (635)
Q Consensus 473 ~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~ 549 (635)
..|..+++.|..+|..|+..+. |+.+|+++ |++|+++|++++.||.+++..+.+.+ +.|+.+|+.+++||++|
T Consensus 15 ~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~l~~F~~d~~el~~Wi~ek~~~~~~~~----~~d~~~v~~~l~kH~af 90 (149)
T 3f31_A 15 EDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDEN----YKDPTNLQGKLQKHQAF 90 (149)
T ss_dssp THHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCS----SCSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc----cCCHHHHHHHHHHHHHH
Confidence 3599999999999999999999 99999987 59999999999999999999876643 47999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 550 ESTLKNLMSDLEKREIQFSAVQDRGEALILQHHPAAKCIEAYMAAMQSQWAWLLQLALCLETHLK 614 (635)
Q Consensus 550 ~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~ 614 (635)
++ ||.++.+++..|...|+.|+..+|++++.|+.+++.|+.+|+.|...+..|+.+|.
T Consensus 91 e~-------El~a~~~~l~~v~~~g~~Li~~~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 91 EA-------EVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HH-------HHHHTTHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-------HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99 99999999999999999999999999999999999999999999999999999985
No 32
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.83 E-value=1.2e-19 Score=176.85 Aligned_cols=197 Identities=16% Similarity=0.191 Sum_probs=164.5
Q ss_pred HHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHHHH
Q psy6471 222 VTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRVQK 300 (635)
Q Consensus 222 F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~~~ 300 (635)
-.+.+.++++||.++...+++.++|. +++.|+. ++||+.|+++|.++.++|..|...|..|...++ ..|..++..
T Consensus 10 ~~r~~~dl~~Wl~e~~~~l~s~d~G~-Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~~---~~i~~rl~~ 85 (210)
T 3pdy_A 10 TLRYLQDLLAWVEENQHRVDGAEWGV-DLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPATR---GAYRDCLGR 85 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHHH---HHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhcccccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccch---HHHHHHHHH
Confidence 35889999999999999999999995 8899997 899999999999999999999999988754322 459999999
Q ss_pred HHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhh
Q psy6471 301 LHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQG 380 (635)
Q Consensus 301 L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ 380 (635)
|..+|..|+..+..|+. .| + .+++|++++.++..||.+++..+.+.++|.|+.+
T Consensus 86 l~~~~~~L~~~a~~R~~---------------~L-------~----~L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~ 139 (210)
T 3pdy_A 86 LDLQYAKLLNSSKARLR---------------SL-------E----SLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTN 139 (210)
T ss_dssp HHHHHHHHHHHHHHHHH---------------HH-------H----HHHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCC
T ss_pred HHHHHHHHHHHHHHHHH---------------HH-------H----HHHHHHHHHHHHHHHHHHHHHHHHccccCCCchh
Confidence 99999999999999963 22 2 3589999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy6471 381 VQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADK 460 (635)
Q Consensus 381 ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~ 460 (635)
|+.++++|..+ ..++...... +..++..++.
T Consensus 140 v~~l~~k~~~f-----------------------------~~el~~~~~~--------------------v~~l~~~~~~ 170 (210)
T 3pdy_A 140 MTAKKESYSAL-----------------------------MRELELKEKK--------------------IKELQNAGDR 170 (210)
T ss_dssp HHHHHHHHHHH-----------------------------HHHHHHHHHH--------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHH-----------------------------HHHHHHhHHH--------------------HHHHHHHHHH
Confidence 99988888642 2222222222 4567777888
Q ss_pred hhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q psy6471 461 LLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMK 500 (635)
Q Consensus 461 l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le 500 (635)
|+..++|.. ..|+.+++.|+.+|+.|.+++. |...|.
T Consensus 171 Ll~~~h~~~---~~I~~~~~~l~~~W~~L~~L~~~~e~hLk 208 (210)
T 3pdy_A 171 LLREDHPAR---PTVESFQAALQTQWSWMLQLCCCIEAHLK 208 (210)
T ss_dssp HHHTTCTTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHcCCCCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888766643 4599999999999999999999 888774
No 33
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.83 E-value=6.4e-20 Score=185.97 Aligned_cols=124 Identities=28% Similarity=0.474 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy6471 501 NATKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQ 580 (635)
Q Consensus 501 ~~L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~ 580 (635)
..|++|+++|++++.||.||++...+.||++. ..++..+++||++|++ ||.+|+++++.|...|+.|+..
T Consensus 8 ~~L~qF~~d~~~e~~Wi~Eke~~~~~~D~~~~---~~~l~~~~~kh~~le~-------El~a~e~~v~~v~~~g~~L~~~ 77 (283)
T 3pe0_A 8 ESLHSFVAAATKELMWLNEKEEEEVGFDWSDR---NTNMTAKKESYSALMR-------ELELKEKKIKELQNAGDRLLRE 77 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCSTT---CCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhcCCchhh---HHHHHHHHHHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHc
Confidence 46899999999999999999999888886433 3347888899999998 9999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy6471 581 HHPAAKCIEAYMAAMQSQWAWLLQLALCLETHLKHAAYYHQFWREMKDAETWIN 634 (635)
Q Consensus 581 ~h~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~~~~qf~~~~~e~~~Wl~ 634 (635)
+||+++.|+++++.|+..|+.|.+++.+|+.+|+++..++||+.||+++++||.
T Consensus 78 ~hp~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~qF~~da~e~e~Wl~ 131 (283)
T 3pe0_A 78 DHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQ 131 (283)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999985
No 34
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.82 E-value=5.3e-19 Score=173.47 Aligned_cols=201 Identities=13% Similarity=0.169 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHH
Q psy6471 220 EKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRV 298 (635)
Q Consensus 220 ~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~ 298 (635)
++|.+++..+..||.+++..+.+.++| .+++.++. +++|+.|..+|.++++.|..+...|+.|+..+++..+.|..++
T Consensus 16 ~~F~~~~~~l~~Wl~~~~~~l~~~e~~-~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~~i~~~l 94 (218)
T 3fb2_A 16 QRFLSDFRDLMSWINGIRGLVSSDELA-KDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKL 94 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCC-SSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCC-CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchHHHHHHH
Confidence 799999999999999999999988776 47888887 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCCh
Q psy6471 299 QKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDL 378 (635)
Q Consensus 299 ~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl 378 (635)
..|..+|+.|...+..|+. .|+++. +++.|.+++.++..||.+++..+.+.++|.++
T Consensus 95 ~~L~~~w~~L~~~~~~R~~---------------~L~q~l--------~l~~F~~d~~~~~~WL~~~e~~L~~~~~g~s~ 151 (218)
T 3fb2_A 95 DILDQERADLEKAWVQRRM---------------MLDQCL--------ELQLFHRDCEQAENWMAAREAFLNTEDKGDSL 151 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCH
Confidence 9999999999999999963 455542 67899999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q psy6471 379 QGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDA 458 (635)
Q Consensus 379 ~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a 458 (635)
++|+.++++|..+ ...+.... + -+..|...|
T Consensus 152 ~~ve~ll~~h~~f------------------------------------~~~l~~~~--------~-----~v~~l~~~~ 182 (218)
T 3fb2_A 152 DSVEALIKKHEDF------------------------------------DKAINVQE--------E-----KIAALQAFA 182 (218)
T ss_dssp ----------CHH------------------------------------HHHHHHHH--------H-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHH------------------------------------HHHHHhhH--------H-----HHHHHHHHH
Confidence 9999999988743 22222111 0 135666777
Q ss_pred HHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q psy6471 459 DKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AE 496 (635)
Q Consensus 459 ~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~ 496 (635)
..|+..+++ ....|..++..|+.+|+.|...+. |+
T Consensus 183 ~~L~~~~h~---~~~~I~~~~~~l~~rW~~l~~~l~~rr 218 (218)
T 3fb2_A 183 DQLIAAGHY---AKGDISSRRNEVLDRWRRLKAQMIEKR 218 (218)
T ss_dssp HHHHHTTCT---THHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHcCCC---CHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 788866544 345699999999999999999887 53
No 35
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.81 E-value=7.4e-19 Score=178.18 Aligned_cols=155 Identities=15% Similarity=0.128 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy6471 211 RLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYP 289 (635)
Q Consensus 211 rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~ 289 (635)
||+.+..| .+|.++|.+.+.||.+++......|++. ....+.. ++||++|++||.+++++|..|...|+.|+..+||
T Consensus 3 rL~~l~~L-~qF~~d~~~e~~Wi~Eke~~~~~~D~~~-~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~hp 80 (283)
T 3pe0_A 3 HMRSLESL-HSFVAAATKELMWLNEKEEEEVGFDWSD-RNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHP 80 (283)
T ss_dssp ----CHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCST-TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCT
T ss_pred hHHHHHHH-HHHHHHHHHHHHHHHHHhHHhhcCCchh-hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 66777777 8999999999999999999966666652 2333554 7899999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHH---HHH
Q psy6471 290 QASDLHKRVQKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVK---NKL 366 (635)
Q Consensus 290 ~~~~I~~r~~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~---e~~ 366 (635)
.++.|.++++.|...|+.|..++..|+. .|+++. .+++|+.|++++.+||. ++.
T Consensus 81 ~~~~I~~r~~~L~~~W~~L~~l~~~R~~---------------~L~~a~--------~~~qF~~da~e~e~Wl~~~~e~~ 137 (283)
T 3pe0_A 81 ARPTVESFQAALQTQWSWMLQLCCCIEA---------------HLKENA--------AYFQFFSDVREAEGQLQKLQEAL 137 (283)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999963 455542 67999999999999887 888
Q ss_pred HhhhhcccCCChhhHHHHHHHhHH
Q psy6471 367 AQIQEADYGSDLQGVQAEIAIHQR 390 (635)
Q Consensus 367 ~~l~s~~~g~dl~~ve~ll~~h~~ 390 (635)
..+.|.++|+|+.+++.|+++|.+
T Consensus 138 ~~~~s~d~g~d~~s~~~LLkkh~~ 161 (283)
T 3pe0_A 138 RRKYSCDRSATVTRLEDLLQDAQD 161 (283)
T ss_dssp HHHHHSCCCSHHHHHHHHTCCHHH
T ss_pred HHhcCCccCCCHHHHHHHHHHHHH
Confidence 889999999999999999988875
No 36
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=99.79 E-value=4.1e-21 Score=165.27 Aligned_cols=73 Identities=30% Similarity=0.434 Sum_probs=65.2
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCCCC--------CCCccccCCC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFSLT--------NVKWNDVDTH 65 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~~~--------~l~~ed~~~~ 65 (635)
|.|||.+|+||+||+|+|| +||+||+| ||+.+.+.++ +|++| +|+|+||..+
T Consensus 9 L~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ll~~eDv~~~ 88 (109)
T 1bkr_A 9 LLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVD 88 (109)
T ss_dssp HHHHHHHTTTCTTCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCCTTCHHHHHHHHHHHHHHHHCCCCCCCHHHHSSS
T ss_pred HHHHHHHHccCCCCCCCCCcccccccHHHHHHHHHHCcCCCCHHHcCcCCHHHHHHHHHHHHHHHcCCCccCCHHHccCC
Confidence 6799999999999999999 99999999 8899987763 44444 5999999889
Q ss_pred CCCcchhHhhhhhhhccCCCC
Q psy6471 66 EIDEKSIITYISSLYDVFPEP 86 (635)
Q Consensus 66 ~pd~~sv~tyv~~~~~~~~~~ 86 (635)
.||++||||||++||++|+++
T Consensus 89 ~pD~ksi~tYvs~~~~~f~~~ 109 (109)
T 1bkr_A 89 HPDEKSIITYVVTYYHYFSKM 109 (109)
T ss_dssp SCCHHHHHHHHHHHHHHHTCC
T ss_pred CCcHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999874
No 37
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.78 E-value=8.7e-18 Score=160.35 Aligned_cols=166 Identities=21% Similarity=0.267 Sum_probs=137.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHH
Q psy6471 347 DTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQ 426 (635)
Q Consensus 347 ~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q 426 (635)
++++|+.++.++.+||.+++..+.+.++|.|+++|+.++++|+.+ ..+|..
T Consensus 5 dl~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~-----------------------------~~ei~~ 55 (185)
T 3lbx_B 5 DKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGI-----------------------------NAEIET 55 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHH-----------------------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHH-----------------------------HHHHHh
Confidence 679999999999999999999999999999999999999888742 222222
Q ss_pred HHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--H
Q psy6471 427 FHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNA--T 503 (635)
Q Consensus 427 ~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~--L 503 (635)
.... +..+...++.|+..+++. ...|+.++..|...|+.|...+. |+.+|+.+ +
T Consensus 56 ~~~~--------------------~~~l~~~G~~L~~~~~~~---~~~i~~~l~~L~~~w~~L~~~w~~r~~~L~~~l~l 112 (185)
T 3lbx_B 56 RSKN--------------------FSACLELGESLLQRQHQA---SEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEV 112 (185)
T ss_dssp HHHH--------------------HHHHHHHHHHHHHTTCTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHH--------------------HHHHHHHHHHHHhcCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 234455566676655443 34699999999999999999999 99999876 5
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy6471 504 KLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRG 574 (635)
Q Consensus 504 ~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g 574 (635)
+.|.++|+.+..||..++..|.+.+ +|.+++.|+.++++|++|+. +|.++++++..+...+
T Consensus 113 ~~F~~d~~~~~~Wl~~~e~~L~~~~---~g~sl~~ve~LlkkH~~fe~-------~l~~~~e~i~~L~~~t 173 (185)
T 3lbx_B 113 CQFSRDASVAEAWLIAQEPYLASGD---FGHTVDSVEKLIKRHEAFEK-------STASWAERFAALEKPT 173 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCC---CCSSHHHHHHHHHHHHHHHH-------HHHHTHHHHHHHHSCC
T ss_pred HHHHHhHHHHHHHHHHhHhhhccCC---CCCCHHHHHHHHHHHHHHHH-------HHHHhHHHHHHHhhhH
Confidence 8999999999999999999998854 68999999999999999999 9999999999987643
No 38
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.76 E-value=3.3e-17 Score=156.34 Aligned_cols=148 Identities=11% Similarity=0.188 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHH
Q psy6471 220 EKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRV 298 (635)
Q Consensus 220 ~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~ 298 (635)
++|..++..+..||.+++..+++.+++ .++..++. +++|+.|..+|.++++++..+...|+.|+..+||.+..|..++
T Consensus 7 ~~F~~~~~dl~~Wl~~~~~~l~~~e~~-~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~i~~~l 85 (185)
T 3lbx_B 7 FRFFSMARDLLSWMESIIRQIETQERP-RDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEEIREKL 85 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCC---CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcCC-CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 799999999999999999999988887 47888887 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCccccCCccchhhhhhhhhhhHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhcccCCCh
Q psy6471 299 QKLHQRWVALRSLLHSRLVSPLASMSFPVVEERTVTRQTRTVMETRLVDTNTHFRALQEAIEWVKNKLAQIQEADYGSDL 378 (635)
Q Consensus 299 ~~L~~~w~~L~~~~~~R~~~l~~~l~~~~~~~~~~L~~~~~~le~~~~~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl 378 (635)
..|..+|+.|...+..|+. .|+++. +++.|+++++++.+||..++..+.+.++|.++
T Consensus 86 ~~L~~~w~~L~~~w~~r~~---------------~L~~~l--------~l~~F~~d~~~~~~Wl~~~e~~L~~~~~g~sl 142 (185)
T 3lbx_B 86 QQVMSRRKEMNEKWEARWE---------------RLRMLL--------EVCQFSRDASVAEAWLIAQEPYLASGDFGHTV 142 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHH---------------HHHHHH--------HHHHHHHhHHHHHHHHHHhHhhhccCCCCCCH
Confidence 9999999999999999963 455542 67899999999999999999999999999999
Q ss_pred hhHHHHHHHhHHH
Q psy6471 379 QGVQAEIAIHQRE 391 (635)
Q Consensus 379 ~~ve~ll~~h~~~ 391 (635)
++|+.++++|..+
T Consensus 143 ~~ve~LlkkH~~f 155 (185)
T 3lbx_B 143 DSVEKLIKRHEAF 155 (185)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999764
No 39
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=99.76 E-value=3.4e-20 Score=163.84 Aligned_cols=75 Identities=33% Similarity=0.449 Sum_probs=66.6
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCCCC--------CCCccccCCC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFSLT--------NVKWNDVDTH 65 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~~~--------~l~~ed~~~~ 65 (635)
|.|||.+|+||+||+|+|| +||+||+| ||+.+.+.++ +|++| +|+|+||..+
T Consensus 13 L~W~q~~~~~y~~v~V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~Lgi~~ll~~eDv~~~ 92 (127)
T 1wyq_A 13 LLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNAFNLAEKELGLTKLLDPEDVNVD 92 (127)
T ss_dssp HHHHHHHHHTSSSCCCSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCSSCCHHHHHHHHHHHHHTTCCCCCSCTTTSCSS
T ss_pred HHHHHHHHhcCCCCCCCCCcccccccHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCCcccCHHHhccC
Confidence 7899999999999999999 99999999 8888887663 34433 5999999889
Q ss_pred CCCcchhHhhhhhhhccCCCCCC
Q psy6471 66 EIDEKSIITYISSLYDVFPEPPA 88 (635)
Q Consensus 66 ~pd~~sv~tyv~~~~~~~~~~~~ 88 (635)
.||+++|||||++||++|++.++
T Consensus 93 ~pDeksimtYvs~l~~~~~~~~~ 115 (127)
T 1wyq_A 93 QPDEKSIITYVATYYHYFSKMKA 115 (127)
T ss_dssp SCCHHHHHHHHHHHHHHHHHSSS
T ss_pred CCcHHHHHHHHHHHHHHhhcCCc
Confidence 99999999999999999998765
No 40
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=99.75 E-value=9.6e-21 Score=165.25 Aligned_cols=76 Identities=25% Similarity=0.305 Sum_probs=61.6
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCC------ccCCCC--------CCCccccCCC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPN------PSFSLT--------NVKWNDVDTH 65 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~------~~~~~~--------~l~~ed~~~~ 65 (635)
|.|||.+|+||+||+|+|| +||+||+| ||+++.+.+ .+|++| +|+|+||..+
T Consensus 14 L~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ll~~eDv~~~ 93 (118)
T 1bhd_A 14 LSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKMSPIERLEHAFSKAQTYLGIEKLLDPEDVAVR 93 (118)
T ss_dssp HHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHHSCHHHHHHHHHHHHHHHHCCCCCSCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCCCcccccCcHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCCcccCHHHhhcC
Confidence 5699999999999999999 99999999 777776554 245544 4999999888
Q ss_pred CCCcchhHhhhhhhhccCCCCCCC
Q psy6471 66 EIDEKSIITYISSLYDVFPEPPAV 89 (635)
Q Consensus 66 ~pd~~sv~tyv~~~~~~~~~~~~~ 89 (635)
.||++||||||++||++|++.+++
T Consensus 94 ~pD~ksvmtYvs~l~~~~~~~~~~ 117 (118)
T 1bhd_A 94 LPDKKSIIMYLTSLFEVLPQQVTI 117 (118)
T ss_dssp CCCHHHHHHHHHHHHHHC------
T ss_pred CCcHHHHHHHHHHHHHHCcCCCCC
Confidence 999999999999999999987654
No 41
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=99.73 E-value=5.8e-20 Score=159.97 Aligned_cols=74 Identities=20% Similarity=0.242 Sum_probs=64.4
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCCCC--------CCCccccCCC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFSLT--------NVKWNDVDTH 65 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~~~--------~l~~ed~~~~ 65 (635)
|.|||.+|+||+||+|+|| +||+||+| ||+.+.+.++ +|++| +|+|+||...
T Consensus 13 L~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~lL~peD~~~~ 92 (116)
T 1wyl_A 13 LRWCQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGITPVVSAQAVVAG 92 (116)
T ss_dssp HHHHHHHHHHSTTCCCSCTTTTTTSSHHHHHHHHHHCTTSCCCSSGGGCCHHHHHHHHHHHHHHTTCCCCCSCHHHHHHT
T ss_pred HHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCCCCHHHhccCCHHHHHHHHHHHHHHHcCCccccCHHHHhcC
Confidence 7899999999999999999 99999999 8888877663 34433 5999999655
Q ss_pred CCCcchhHhhhhhhhccCCCCCC
Q psy6471 66 EIDEKSIITYISSLYDVFPEPPA 88 (635)
Q Consensus 66 ~pd~~sv~tyv~~~~~~~~~~~~ 88 (635)
||++||||||++||++|++.+.
T Consensus 93 -~d~ksv~tYvs~l~~~~~~~~~ 114 (116)
T 1wyl_A 93 -SDPLGLIAYLSHFHSAFKSGPS 114 (116)
T ss_dssp -SCHHHHHHHHHHHHHHSCCSCS
T ss_pred -CchhHHHHHHHHHHHHccCCCC
Confidence 9999999999999999998764
No 42
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=99.73 E-value=9.3e-20 Score=159.74 Aligned_cols=75 Identities=19% Similarity=0.366 Sum_probs=65.9
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCCCC--------CCCccccC-C
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFSLT--------NVKWNDVD-T 64 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~~~--------~l~~ed~~-~ 64 (635)
|.|||.+|+||+||+|+|| +||+||+| ||+.+.+.++ +|++| +|+|+||. .
T Consensus 15 L~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~lL~peD~~~~ 94 (121)
T 2d88_A 15 LGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKEMASV 94 (121)
T ss_dssp HHHHHHHSTTSSSCCCCCSSHHHHTSHHHHHHHHHHCTTTSCTTTSCTTCHHHHHHHHHHHHHHHTCCCCSSCHHHHHHS
T ss_pred HHHHHHHhccCCCCCCCCchhhccccHHHHHHHHHhCcCcCCHHHcCccCHHHHHHHHHHHHHHHcCCCCcCCHHHHhcc
Confidence 7899999999999999999 99999999 8888887763 44443 59999996 5
Q ss_pred CCCCcchhHhhhhhhhccCCCCCC
Q psy6471 65 HEIDEKSIITYISSLYDVFPEPPA 88 (635)
Q Consensus 65 ~~pd~~sv~tyv~~~~~~~~~~~~ 88 (635)
+.||+++|||||++||++|++..+
T Consensus 95 ~~pD~ksimtYvs~l~~~~~~~~p 118 (121)
T 2d88_A 95 GEPDKLSMVMYLTQFYEMFKDSGP 118 (121)
T ss_dssp SCCCHHHHHHHHHHHHHHHSSCCS
T ss_pred CCCcHHHHHHHHHHHHHHcccCCC
Confidence 899999999999999999998754
No 43
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=1.1e-19 Score=158.85 Aligned_cols=76 Identities=20% Similarity=0.235 Sum_probs=66.5
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCCCC-------CCCccccC-CC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFSLT-------NVKWNDVD-TH 65 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~~~-------~l~~ed~~-~~ 65 (635)
|.|||.+|++|+||+|+|| +||+||+| ||+.+.+.++ +|+++ +|+|+||. +.
T Consensus 15 L~W~~~~~~~y~~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~~~~~~n~~~af~~a~~LGi~~ll~peDi~~~~ 94 (119)
T 2d89_A 15 LVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIGISRLLEPSDMVLLA 94 (119)
T ss_dssp HHHHHHHTTTCSSCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCTTCSHHHHHHHHHHHHHHTCCCCSCHHHHHHSS
T ss_pred HHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCChhhhcccCHHHHHHHHHHHHHHhCCCcccCHHHHhccC
Confidence 7899999999999999999 99999999 8888887663 44433 59999984 67
Q ss_pred CCCcchhHhhhhhhhccCCCCCCC
Q psy6471 66 EIDEKSIITYISSLYDVFPEPPAV 89 (635)
Q Consensus 66 ~pd~~sv~tyv~~~~~~~~~~~~~ 89 (635)
.||+++|||||++||++|++.+..
T Consensus 95 ~pD~ksvmtYvs~l~~~f~~~~~~ 118 (119)
T 2d89_A 95 IPDKLTVMTYLYQIRAHFSSGPSS 118 (119)
T ss_dssp SCCHHHHHHHHHHHHHHHSCCCCC
T ss_pred CCcHHHHHHHHHHHHHHccCCCCC
Confidence 899999999999999999987754
No 44
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=99.69 E-value=1.1e-18 Score=154.20 Aligned_cols=73 Identities=25% Similarity=0.288 Sum_probs=63.9
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCCCC--------CCCcccc-CC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFSLT--------NVKWNDV-DT 64 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~~~--------~l~~ed~-~~ 64 (635)
|.|||.+|++|+||+|+|| +||+||+| ||+.+.+.++ +|++| +|+|+|| ++
T Consensus 13 L~W~q~~~~~y~~v~V~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgip~lL~peD~v~~ 92 (128)
T 2d87_A 13 LDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCPQLLDTEDMVRL 92 (128)
T ss_dssp HHHHHHHSSSCTTCCCSCTTTTTTSSHHHHHHHHHHCTTTSCSTTSCSSCHHHHHHHHHHHHHHHHCCCCCSCHHHHHHS
T ss_pred HHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCCHHHcCccCHHHHHHHHHHHHHHcCCCCcccCHHHHhcc
Confidence 7899999999999999999 99999999 8888887763 44433 5999998 67
Q ss_pred CCCCcchhHhhhhhhhccCCCC
Q psy6471 65 HEIDEKSIITYISSLYDVFPEP 86 (635)
Q Consensus 65 ~~pd~~sv~tyv~~~~~~~~~~ 86 (635)
..||+++|||||++||++|+..
T Consensus 93 ~~pD~ksvmtYvs~l~~~~~~~ 114 (128)
T 2d87_A 93 REPDWKCVYTYIQEFYRCLVQK 114 (128)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHhhc
Confidence 7899999999999999999754
No 45
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=99.64 E-value=1.8e-16 Score=137.02 Aligned_cols=102 Identities=20% Similarity=0.291 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy6471 503 TKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHH 582 (635)
Q Consensus 503 L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h 582 (635)
++.|.++|+++++||.+++..+.+.+ +|.|+.+|+.+++||++|+. +|.++..++..|...|+.|+..||
T Consensus 5 lq~F~~d~~~~e~Wl~~~e~~l~~~d---~g~~l~~v~~Llkkh~~fe~-------~~~~~~~~i~~l~~~a~~L~~~~h 74 (107)
T 2spc_A 5 LQLYMRDCELAESWMSAREAFLNADD---DANAGGNVEALIKKHEDFDK-------AINGHEQKIAALQTVADQLIAQNH 74 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCSCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcc---cCCCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999877 58999999999999999999 999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 583 PAAKCIEAYMAAMQSQWAWLLQLALCLETHLK 614 (635)
Q Consensus 583 ~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~ 614 (635)
|+++.|..+...|..+|+.|.+++..|+..|+
T Consensus 75 ~~~~~I~~r~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 75 YASNLVDEKRKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999885
No 46
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.63 E-value=8.8e-15 Score=128.61 Aligned_cols=108 Identities=17% Similarity=0.246 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy6471 503 TKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQHH 582 (635)
Q Consensus 503 L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~h 582 (635)
|..|..+++++..||.+++..+.+.+ |+|.|++.++.++++|++|+. ||.++++.+..|+..|+.|+..+|
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~--~~~~d~~~v~~~l~~h~~l~~-------ei~~~~~~v~~v~~~g~~L~~~~~ 74 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQD--DISDDVEDVKEQFATHETFMM-------ELSAHQSSVGSVLQAGNQLMTQGT 74 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSC--CCCSSHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC--CCCCCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 68999999999999999999998754 579999999999999999999 999999999999999999999998
Q ss_pred CChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 583 PAAK---CIEAYMAAMQSQWAWLLQLALCLETHLKHAAYY 619 (635)
Q Consensus 583 ~~~~---~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~~~ 619 (635)
++++ .|+.+++.|+.+|+.|...+..|..+|++|+..
T Consensus 75 ~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~ 114 (118)
T 3uul_A 75 LSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALME 114 (118)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8755 599999999999999999999999999999843
No 47
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.63 E-value=2.6e-15 Score=139.49 Aligned_cols=126 Identities=10% Similarity=0.124 Sum_probs=115.6
Q ss_pred CChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHH
Q psy6471 182 LHIDVIERNWSRLLAAHQEKDSILQDEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVD 260 (635)
Q Consensus 182 ~~~~~i~~~W~~L~~~~~~r~~~L~~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~ 260 (635)
.+...|+.+|..|.....+|.. +|+....+ ++|.++|..+..||.+++..+.+.++ .++..++. ++||+
T Consensus 29 ~r~~~l~~rw~~L~~~a~~R~~-------~Le~s~~l-q~F~~d~~el~~Wi~ek~~~a~~~~~--~d~~~v~~ll~kH~ 98 (161)
T 3lbx_A 29 ERRQEVLTRYQSFKERVAERGQ-------KLEDSYHL-QVFKRDADDLGKWIMEKVNILTDKSY--EDPTNIQGKYQKHQ 98 (161)
T ss_dssp GHHHHGGGHHHHHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSC--CSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCc--CCHHHHHHHHHHHH
Confidence 5788999999999999999999 66666666 89999999999999999998877666 37888887 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHHHHHHHhccc
Q psy6471 261 VLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRVQKLHQRWVALRSLLHSRLV 317 (635)
Q Consensus 261 ~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~~~L~~~w~~L~~~~~~R~~ 317 (635)
+|+++|.+++++|..|...|+.|+..+|+.++.|..+++.|+.+|+.|...+..|+.
T Consensus 99 afe~El~a~~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~ 155 (161)
T 3lbx_A 99 SLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGD 155 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999963
No 48
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.63 E-value=6.4e-15 Score=129.60 Aligned_cols=111 Identities=17% Similarity=0.231 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy6471 502 ATKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEALILQH 581 (635)
Q Consensus 502 ~L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L~~~~ 581 (635)
.|++|..+++++..||.+++..+.+.+ |+|.|++.++.++++|++|+. ||.++++.+..|+..|+.|+..+
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~--~~~~d~~~v~~~l~~h~~l~~-------ei~~~~~~v~~~~~~g~~L~~~~ 73 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQG--EISNDVEVVKDQFHTHEGYMM-------DLTAHQGRVGNILQLGSKLIGTG 73 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC--SCCSSHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCCHHHHHHHHHHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHcC
Confidence 368999999999999999999998754 579999999999999999999 99999999999999999999988
Q ss_pred CCChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 582 HPAAK---CIEAYMAAMQSQWAWLLQLALCLETHLKHAAYYHQ 621 (635)
Q Consensus 582 h~~~~---~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a~~~~q 621 (635)
|++++ .|+.+++.|+.+|+.|...+..|+.+|++|+...|
T Consensus 74 ~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q 116 (119)
T 3uun_A 74 KLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQ 116 (119)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87654 69999999999999999999999999999985544
No 49
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.62 E-value=3.8e-15 Score=174.09 Aligned_cols=222 Identities=13% Similarity=0.160 Sum_probs=167.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHH
Q psy6471 347 DTNTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQ 426 (635)
Q Consensus 347 ~~~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q 426 (635)
...+|.+.+.++..||.++.+.+.+.++|.++..++.++.+|..+..... ....+
T Consensus 767 ~~iQY~~~a~~L~~WIr~kqa~l~~r~~~~sl~~IQ~ll~~f~~fk~~~k-------------------------p~r~~ 821 (1010)
T 1g8x_A 767 TKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEK-------------------------PPKGQ 821 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHTSH-------------------------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHhccC-------------------------ChhHH
Confidence 45678899999999999999999999999999999999888865311000 00000
Q ss_pred HHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhh--hcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--
Q psy6471 427 FHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLL--EEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKN-- 501 (635)
Q Consensus 427 ~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~--~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~-- 501 (635)
-...++.. ...+...- ++. ..+.|.. ......|+++|..|..... |...|..
T Consensus 822 ek~~Le~l----------------~~~iqtkl-rl~~r~~~~p~~------gl~~~dL~~~W~~Le~ae~eRe~~L~~el 878 (1010)
T 1g8x_A 822 EVSELEAI----------------YNSLQTKL-RLIKREPFVAPA------GLTPNEIDSTWSALEKAEQEHAEALRIEL 878 (1010)
T ss_dssp HHHHHHHH----------------HHHHHHHH-HTTTCCCCCCCT------TCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----------------HHHHHHHH-HhcCCCCCCCcc------ccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111100 00111000 010 0111111 1223667777777776665 5555532
Q ss_pred --------HHHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHH-HHHH
Q psy6471 502 --------ATKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFS-AVQD 572 (635)
Q Consensus 502 --------~L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~-~v~~ 572 (635)
-..+|.+.|+..+.||.+++..+.+.+ .|.|+.+|+.+++||++|++ ||.++++++. .|..
T Consensus 879 ~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d---~g~dL~~Vqal~KKhea~e~-------dl~a~e~ri~~~l~~ 948 (1010)
T 1g8x_A 879 KRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNE---TGDSITAVQAKLKNLEAFDG-------ECQSLEGQSNSDLLS 948 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCC---SCCSTTTTGGGTTSHHHHTT-------TTTHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 248999999999999999999999976 59999999999999999999 9999999999 9999
Q ss_pred HHHHHHhcCCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 573 RGEALILQHHPAAKCIEAYMAAMQ-SQWAWLLQLALCLETHLKHAAYYHQFWREM 626 (635)
Q Consensus 573 ~g~~L~~~~h~~~~~I~~~l~~L~-~~W~~L~~~~~~R~~~L~~a~~~~qf~~~~ 626 (635)
.|+.|.+.+|++++.|..|.+.|. .+|+.|.+++..|+..|++++.++++|.|.
T Consensus 949 ~a~eL~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~~~~~~~ 1003 (1010)
T 1g8x_A 949 ILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDL 1003 (1010)
T ss_dssp HHHHHHHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTTTTTTST
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999996 899999999999999999999999988654
No 50
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.57 E-value=6.8e-15 Score=134.93 Aligned_cols=126 Identities=12% Similarity=0.191 Sum_probs=114.9
Q ss_pred CChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHH
Q psy6471 182 LHIDVIERNWSRLLAAHQEKDSILQDEIKRLDRLQRLAEKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVD 260 (635)
Q Consensus 182 ~~~~~i~~~W~~L~~~~~~r~~~L~~el~rle~l~~la~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~ 260 (635)
.+...|..+|..|.....+|.. +|+....+ ++|.++|.++..||.+++..+.+++++ ++..++. +++|+
T Consensus 19 ~r~~~l~~r~~~L~~~a~~R~~-------~Le~s~~l-~~F~~d~~el~~Wi~ek~~~~~~~~~~--d~~~v~~~l~kH~ 88 (149)
T 3f31_A 19 ERRQQVLDRYHRFKELSTLRRQ-------KLEDSYRF-QFFQRDAEELEKWIQEKLQIASDENYK--DPTNLQGKLQKHQ 88 (149)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSCSSC--SSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCcccC--CHHHHHHHHHHHH
Confidence 4678899999999999999999 66666666 999999999999999999988776664 6788886 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHHHHHHHhccc
Q psy6471 261 VLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRVQKLHQRWVALRSLLHSRLV 317 (635)
Q Consensus 261 ~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~~~L~~~w~~L~~~~~~R~~ 317 (635)
+|+++|.+++++|..|...|+.|+..+|++++.|+.+++.|+.+|+.|...+..|..
T Consensus 89 afe~El~a~~~~l~~v~~~g~~Li~~~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~ 145 (149)
T 3f31_A 89 AFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGI 145 (149)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999863
No 51
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.50 E-value=6.5e-16 Score=156.03 Aligned_cols=74 Identities=39% Similarity=0.554 Sum_probs=62.9
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCCCC--------CCCccccCCC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFSLT--------NVKWNDVDTH 65 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~~~--------~l~~ed~~~~ 65 (635)
|.|||.+|+||+||+|+|| +||+||+| ||+.+.+.++ +|++| +|+||||...
T Consensus 195 L~W~n~~~~~y~~v~I~nFs~sw~DG~af~aLI~~~~P~lid~~~l~~~~~~~N~~~Af~~Ae~~LGi~~ll~pEDi~~~ 274 (296)
T 3f7p_A 195 LLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVP 274 (296)
T ss_dssp HHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHHHHHHCGGGCCHHHHTTSCHHHHHHHHHHHHHHHHCCCCCCCHHHHSSS
T ss_pred HHHHHHHhcCCCCCcCCCccccccccHHHHHHHHHHCcCccCHHHcCcccHHHHHHHHHHHHHHhCCCCccCCHHHhcCC
Confidence 7799999999999999999 99999999 7777776552 45544 4999999888
Q ss_pred CCCcchhHhhhhhhhccCCCCC
Q psy6471 66 EIDEKSIITYISSLYDVFPEPP 87 (635)
Q Consensus 66 ~pd~~sv~tyv~~~~~~~~~~~ 87 (635)
.||++||||||++||++|++.|
T Consensus 275 ~pDeksimtyvs~ly~~fp~lp 296 (296)
T 3f7p_A 275 QPDEKSIITYVSSLYDAMPRVP 296 (296)
T ss_dssp SCCHHHHHHHHHHHHHTCC---
T ss_pred CCcHHHHHHHHHHHHHHCcCCC
Confidence 9999999999999999999754
No 52
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=99.48 E-value=6e-14 Score=121.05 Aligned_cols=97 Identities=12% Similarity=0.188 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhHhhhcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHH
Q psy6471 220 EKVTREMKRVDGRLEELESRINEEARRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQASDLHKRV 298 (635)
Q Consensus 220 ~~F~~~~~~~~~WL~~~e~~l~~~~~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~~~I~~r~ 298 (635)
++|.++++.++.||.+.+..+.++++| .++..|++ ++||+.|+.+|.++.++|..|...|+.|++.+|++++.|..++
T Consensus 6 q~F~~d~~~~e~Wl~~~e~~l~~~d~g-~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~~~~~I~~r~ 84 (107)
T 2spc_A 6 QLYMRDCELAESWMSAREAFLNADDDA-NAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVDEKR 84 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 899999999999999999999999998 48999998 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccc
Q psy6471 299 QKLHQRWVALRSLLHSRLV 317 (635)
Q Consensus 299 ~~L~~~w~~L~~~~~~R~~ 317 (635)
..|..+|+.|...+..|+.
T Consensus 85 ~~l~~~w~~L~~~~~~Rr~ 103 (107)
T 2spc_A 85 KQVLERWRHLKEGLIEKRS 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999974
No 53
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.43 E-value=3e-15 Score=149.20 Aligned_cols=75 Identities=25% Similarity=0.433 Sum_probs=64.0
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCC-------CC-CCCcccc-CC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFS-------LT-NVKWNDV-DT 64 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~-------~~-~l~~ed~-~~ 64 (635)
|.||+.+|+||+||+|+|| +||+||+| ||+.+.+.++ +|+ ++ +++|+|| .+
T Consensus 146 L~W~~~~~~~y~~v~v~nFs~s~~DG~a~~aLi~~~~P~~id~~~l~~~~~~~n~~~a~~~A~~~lGi~~~l~peDiv~~ 225 (254)
T 1wku_A 146 LLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDPIGNLNTAFEVAEKYLDIPKMLDAEDIVNT 225 (254)
T ss_dssp HHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHHHHHCTTSCCGGGCCTTCHHHHHHHHHHHHHHHSCCCCCSCHHHHHHS
T ss_pred HHHHHHHccCCCCCcCCCCccchhhHHHHHHHHHHHCCCcccccccCcCCHHHHHHHHHHHHHHHcCCCCcCCHHHHhcc
Confidence 7899999999999999999 99999999 8888887663 333 33 5999998 77
Q ss_pred CCCCcchhHhhhhhhhccCCCCCC
Q psy6471 65 HEIDEKSIITYISSLYDVFPEPPA 88 (635)
Q Consensus 65 ~~pd~~sv~tyv~~~~~~~~~~~~ 88 (635)
+.||+++|||||++||++|++...
T Consensus 226 ~~pD~k~imtyva~l~~~~~~~~~ 249 (254)
T 1wku_A 226 PKPDEKAIMTYVSCFYHAFAGAEQ 249 (254)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHC--
T ss_pred CCCcHHHHHHHHHHHHHHhhccch
Confidence 889999999999999999987654
No 54
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.39 E-value=2.6e-14 Score=167.30 Aligned_cols=218 Identities=12% Similarity=0.130 Sum_probs=149.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHH
Q psy6471 349 NTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFH 428 (635)
Q Consensus 349 ~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~ 428 (635)
..|.+.+.++..||.++...+.+.+++..+..++.+++.|..+...... -..+-.
T Consensus 761 ~eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekp-------------------------p~~~ek 815 (995)
T 2ycu_A 761 SDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKP-------------------------PKGQEV 815 (995)
T ss_dssp HHHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHH-------------------------HHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcc-------------------------chHHHH
Confidence 4678888999999999999888888998999999988887643110000 000000
Q ss_pred hhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCC--hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----
Q psy6471 429 TRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSD--PQLRRLRREMDEVNRLFDEFERRAR-AEEDMKN---- 501 (635)
Q Consensus 429 ~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~--~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~---- 501 (635)
..++.+. .+.. ....... +-..........|+.+|..|..... |...|..
T Consensus 816 ~rLeal~-----~~iq------------------tkLrl~~~~~y~p~~gl~~~~L~~~W~~L~~ae~er~~~L~~el~R 872 (995)
T 2ycu_A 816 SELEAIY-----NSLQ------------------TKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKR 872 (995)
T ss_dssp HHHCSSS-----CCCC------------------CSSCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-----HHHH------------------HHHHhhcCCCCCcchhccHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 0110000 0000 0000000 0000112345777778888766665 5555532
Q ss_pred ------HHHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHH-HHHHHH
Q psy6471 502 ------ATKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFS-AVQDRG 574 (635)
Q Consensus 502 ------~L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~-~v~~~g 574 (635)
..++|.++|++.++||++++..+.+.+ .|.|+.+|+.+++||++|++ +|.++++++. .|...|
T Consensus 873 lerL~~la~kf~~ka~~~e~Wl~eke~~l~s~d---~g~dl~~vqallkKhea~e~-------dl~a~e~ri~~~l~~~a 942 (995)
T 2ycu_A 873 QKKIAVLLQKYNRILKKLENWATTKSVYLGSNE---TGDSITAVQAKLKNLEAFDG-------ECQSLEGQSNSDLLSIL 942 (995)
T ss_dssp HHHHHHTTTGGGGCCCCCCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHH-------HHHHTTTCSCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cccCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 237999999999999999999999977 48999999999999999999 9999999997 999999
Q ss_pred HHHHhcCCCChhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 575 EALILQHHPAAKCIEAYMAAM-QSQWAWLLQLALCLETHLKHAAYYHQFWR 624 (635)
Q Consensus 575 ~~L~~~~h~~~~~I~~~l~~L-~~~W~~L~~~~~~R~~~L~~a~~~~qf~~ 624 (635)
+.|.+.+|++++.|..|...| ..+|+.|.+++.+|+..|++++..+|...
T Consensus 943 ~~L~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~q~~~ 993 (995)
T 2ycu_A 943 AQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIE 993 (995)
T ss_dssp HHHTTTHHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC--------------
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999 69999999999999999999998877543
No 55
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=99.38 E-value=1.1e-14 Score=144.64 Aligned_cols=76 Identities=28% Similarity=0.375 Sum_probs=63.7
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCC-CCC------ccCCCC--------CCCccccCC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSG-DPN------PSFSLT--------NVKWNDVDT 64 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~-~~~------~~~~~~--------~l~~ed~~~ 64 (635)
|-||+.+|++|+||+|+|| +||+||+| ||+.+. +.+ .+|++| +++|+||..
T Consensus 141 L~W~~~~~~~~~~~~i~nFs~s~~DG~a~~aLi~~~~P~li~~~~~~~~~~~~~n~~~a~~~A~~~lGi~~~l~peDi~~ 220 (246)
T 1dxx_A 141 LSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQSATQRLEHAFNIARYQLGIEKLLDPEDVDT 220 (246)
T ss_dssp HHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHTCCCHHHHHHHHHHHHHHTTCCCCCCCHHHHSS
T ss_pred HHHHHHHhccCCCCCcCCCcccchhHHHHHHHHHHHCcCccchhhhcccCCHHHHHHHHHHHHHHhCCCCccCCHHHhhc
Confidence 7899999999999999999 99999999 666654 333 233333 499999988
Q ss_pred CCCCcchhHhhhhhhhccCCCCCCC
Q psy6471 65 HEIDEKSIITYISSLYDVFPEPPAV 89 (635)
Q Consensus 65 ~~pd~~sv~tyv~~~~~~~~~~~~~ 89 (635)
+.||+++|||||+++|++|+..+++
T Consensus 221 ~~pD~k~i~tyva~l~~~~~~~~~~ 245 (246)
T 1dxx_A 221 TYPDKKSILMYITSLFQVLPQQVSI 245 (246)
T ss_dssp SSCCHHHHHHHHHHHHTTSCCCEEE
T ss_pred CCCcHHHHHHHHHHHHHHccCCCCC
Confidence 8999999999999999999987654
No 56
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=99.37 E-value=4.6e-11 Score=116.67 Aligned_cols=201 Identities=11% Similarity=0.097 Sum_probs=138.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHH
Q psy6471 349 NTHFRALQEAIEWVKNKLAQIQEADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIEQFH 428 (635)
Q Consensus 349 ~~f~~~~~e~~~Wl~e~~~~l~s~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~q~~ 428 (635)
..|.+.+.++..||+++...+.+..+|+++++|+.++.++..+.... .+ -.......+....
T Consensus 14 ~eYe~~as~Ll~WI~~~~~~l~~r~f~~sl~~vq~~l~~f~~fr~~e-----kp-------------pk~~EK~~Le~ll 75 (235)
T 2odv_A 14 QEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEME-----LP-------------AKEADKNRSKGIY 75 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC-CCSSHHHHHHHHHHHHHHHHHT-----HH-------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhcc-----CC-------------HHHHHHHHHHHHH
Confidence 34677789999999999999999999999999999988876541110 00 0001111111111
Q ss_pred hhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-----------HHH
Q psy6471 429 TRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-----------AEE 497 (635)
Q Consensus 429 ~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-----------R~~ 497 (635)
..|.. .| . . ..+.|+.. .....|+..|..|...-. |..
T Consensus 76 ~~lqt-------------------kl----r-~-~~~~ppeg------~~~~di~~~W~~Le~ae~eRe~aL~~el~Rle 124 (235)
T 2odv_A 76 QSLEG-------------------AV----Q-A-GQLKVPPG------YHPLDVEKEWGKLHVAILEREKQLRSEFERLE 124 (235)
T ss_dssp HHHHH-------------------HH----H-T-TSSCCCTT------CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-------------------HH----H-c-CCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 01 0 0 11222211 012456666666654433 444
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q psy6471 498 DMKNATKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRGEAL 577 (635)
Q Consensus 498 ~Le~~L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g~~L 577 (635)
+|+.-...|.+.|...+.||++++..+ +.+ +.+++.... +++|.+|+. +|.+++.+|..+...++.|
T Consensus 125 rLe~La~kf~rka~~~e~~L~~~~~~L-~~d----~~~l~~~~a-~k~~e~ie~-------dL~~~e~~i~~l~~~a~~L 191 (235)
T 2odv_A 125 ALQRIVTKLQMEAGLAEEQLNQADALL-QSD----VRLLAAGKV-PQRAGEVER-------DLDKADSMIRLLFNDVQTL 191 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH----HHHTTTTCC-CSCHHHHHH-------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHh----hhhcchhHH-HHHHHHHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 453334899999999999999999999 434 233333333 677999988 9999999999999999999
Q ss_pred HhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 578 ILQHHPAAKCIEAYMAAMQSQWAWLLQLALCLET 611 (635)
Q Consensus 578 ~~~~h~~~~~I~~~l~~L~~~W~~L~~~~~~R~~ 611 (635)
...+|++++.|..+...|..+|..|...+..|..
T Consensus 192 ~~~~y~~a~~i~~r~~~l~~~w~~L~~~~~~r~~ 225 (235)
T 2odv_A 192 KDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLK 225 (235)
T ss_dssp HHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987765
No 57
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=99.35 E-value=5.4e-14 Score=146.24 Aligned_cols=72 Identities=18% Similarity=0.206 Sum_probs=60.9
Q ss_pred ccccccccCCCCCCcccccC-CCCccCCC--------------CccCCCCCCc------cCCCC--------CCCccccC
Q psy6471 13 GLIVPKSKREGRQGVSSSQF-CSVRDTAS--------------RLTSSGDPNP------SFSLT--------NVKWNDVD 63 (635)
Q Consensus 13 ~~~~~~~~t~~y~~v~i~~f-~sw~dG~a--------------~~~~~~~~~~------~~~~~--------~l~~ed~~ 63 (635)
-|.|||.+ |+||+|+|| +||+||+| ||+++++.++ +|++| +|+||||.
T Consensus 145 LL~W~~~~---~~~~~v~nF~~sw~DG~af~aLi~~~~P~~~~d~~~l~~~~~~~n~~~Af~~Ae~~lGip~ll~peDi~ 221 (347)
T 4b7l_A 145 LLGWIQNK---IPYLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKPVDNAREAMQQADDWLGVPQVITPEEII 221 (347)
T ss_dssp HHHHHHHH---CTTSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHHCCCCSSCHHHHT
T ss_pred HHHHHHhh---CCCcccCCCCCCccchHHHHHHHHHhCCccccchhhcCcCCHHHHHHHHHHHHHHhcCCCcccCHHHcC
Confidence 36799998 468999999 99999998 6788887663 44444 59999998
Q ss_pred CCCCCcchhHhhhhhhhccCCCCC
Q psy6471 64 THEIDEKSIITYISSLYDVFPEPP 87 (635)
Q Consensus 64 ~~~pd~~sv~tyv~~~~~~~~~~~ 87 (635)
...||++||||||++||+++.++.
T Consensus 222 ~~~pDeksimtYvs~~~~~~~~~~ 245 (347)
T 4b7l_A 222 HPDVDEHSVMTYLSQFPKAKLKPG 245 (347)
T ss_dssp CTTCCHHHHHHHHTTGGGCCCCTT
T ss_pred CCCCChhHHHHHHHHHhhhccCcc
Confidence 789999999999999999998764
No 58
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.35 E-value=2e-14 Score=142.99 Aligned_cols=76 Identities=38% Similarity=0.539 Sum_probs=60.3
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCCCC--------CCCccccCCC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFSLT--------NVKWNDVDTH 65 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~~~--------~l~~ed~~~~ 65 (635)
|-||+.+|++|+||+|+|| +||+||+| ||+.+.+.++ +|++| +++||||...
T Consensus 139 L~W~~~~~~~~~~~~v~nF~~s~~DG~a~~aLi~~~~P~~i~~~~l~~~~~~~n~~~a~~~a~~~lGi~~~l~peDi~~~ 218 (245)
T 1sh5_A 139 LLWSQRMVEGYQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVP 218 (245)
T ss_dssp HHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHHHHTTCTTTCCHHHHHHSCHHHHHHHHHHHHHHHHCCCCCCCHHHHSSS
T ss_pred HHHHHHHhccCCCcccCCccccccchHHHHHHHHHHCCCCCCHHHcccCCHHHHHHHHHHHHHHhCCCCccCCHHHhccC
Confidence 7899999999999999999 99999999 5555544432 33333 4999999878
Q ss_pred CCCcchhHhhhhhhhccCCCCCCC
Q psy6471 66 EIDEKSIITYISSLYDVFPEPPAV 89 (635)
Q Consensus 66 ~pd~~sv~tyv~~~~~~~~~~~~~ 89 (635)
.||+++|||||+++|++|++.++.
T Consensus 219 ~pd~k~i~tyva~l~~~~~~~~~~ 242 (245)
T 1sh5_A 219 QPDEKSIITYVSSLYDAMPRVPGA 242 (245)
T ss_dssp SCCHHHHHHHHHHHHHHCC-----
T ss_pred CCcHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999987653
No 59
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=99.28 E-value=1.8e-13 Score=136.80 Aligned_cols=66 Identities=15% Similarity=0.222 Sum_probs=54.4
Q ss_pred cccccccCCCCCCcccccC-CCCccCCC--------------CccCCCCCCc------cCCCC--------CCCccccCC
Q psy6471 14 LIVPKSKREGRQGVSSSQF-CSVRDTAS--------------RLTSSGDPNP------SFSLT--------NVKWNDVDT 64 (635)
Q Consensus 14 ~~~~~~~t~~y~~v~i~~f-~sw~dG~a--------------~~~~~~~~~~------~~~~~--------~l~~ed~~~ 64 (635)
|-||+++ |+||+|+|| +||+||+| ||+.+++.++ +|++| +|+||||..
T Consensus 176 L~W~n~~---~~~~~I~nFs~sw~DG~af~aLi~~~~P~li~d~~~l~~~~~~~n~~~Af~~Ae~~lGi~~ll~peDiv~ 252 (272)
T 3hoc_A 176 LGWIQNK---LPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVD 252 (272)
T ss_dssp HHHHHHH---CTTSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHHCCCCSSCHHHHTC
T ss_pred HHHHHhh---CCCCCCCChhhcccchHHHHHHHHHhCcccccchhhcCccCHHHHHHHHHHHHHHhCCCCccCCHHHhcc
Confidence 6799986 789999999 99999998 6777776653 44433 599999977
Q ss_pred CCCCcchhHhhhhhhhcc
Q psy6471 65 HEIDEKSIITYISSLYDV 82 (635)
Q Consensus 65 ~~pd~~sv~tyv~~~~~~ 82 (635)
+.||++||||||++||++
T Consensus 253 ~~pD~ksimtYvs~~~~a 270 (272)
T 3hoc_A 253 PNVDKHSVMTYLSQFPKA 270 (272)
T ss_dssp TTCCHHHHHHHHTTCC--
T ss_pred CCCChHHHHHHHHHhhcc
Confidence 899999999999999975
No 60
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.24 E-value=2e-10 Score=100.51 Aligned_cols=112 Identities=17% Similarity=0.295 Sum_probs=90.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhh-cccCCChhhHHHHHHHhHHHHHHHHHHHhhhccCChhhHHHHHHHHHHHHHHHH
Q psy6471 347 DTNTHFRALQEAIEWVKNKLAQIQE-ADYGSDLQGVQAEIAIHQREQNIIAQIQEADYGSDLQGVQAEIAIHQREQNIIE 425 (635)
Q Consensus 347 ~~~~f~~~~~e~~~Wl~e~~~~l~s-~~~g~dl~~ve~ll~~h~~~~~~~~~~~~~~~~~~l~~v~~~l~~h~~~~~~i~ 425 (635)
+++.|...++++..||.+++..+.+ .++|.|+..|+.++.+|+. +..+|.
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~-----------------------------l~~ei~ 53 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHET-----------------------------FMMELS 53 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHH-----------------------------HHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH-----------------------------HHHHHH
Confidence 5788999999999999999998875 6799999999998888764 233333
Q ss_pred HHHhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q psy6471 426 QFHTRVEHCIAAKFLAMGAAQRNAIRKALNEDADKLLEEGDPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDMKNATK 504 (635)
Q Consensus 426 q~~~~l~~~~~~~~~~~g~~~~~~~~~~L~~~a~~l~~~~~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~Le~~L~ 504 (635)
..... +..++..|..|+..+++++++...|+.++..|+.+|+.|...+. |..+|+++|.
T Consensus 54 ~~~~~--------------------v~~v~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~ 113 (118)
T 3uul_A 54 AHQSS--------------------VGSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALM 113 (118)
T ss_dssp HHHHH--------------------HHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--------------------HHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333 35666777788876666666677899999999999999999999 9999999986
Q ss_pred HHH
Q psy6471 505 LFT 507 (635)
Q Consensus 505 ~F~ 507 (635)
.+.
T Consensus 114 ~~Q 116 (118)
T 3uul_A 114 ELQ 116 (118)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 61
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.22 E-value=1.1e-10 Score=102.30 Aligned_cols=97 Identities=12% Similarity=0.198 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhHhh-hcccCCchhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCh---hhH
Q psy6471 220 EKVTREMKRVDGRLEELESRINEEA-RRLDRLHPLDA-KHNVDVLEHDLRQAEENINTLFSDVQTLREGRYPQA---SDL 294 (635)
Q Consensus 220 ~~F~~~~~~~~~WL~~~e~~l~~~~-~g~~~l~~ve~-lkkh~~le~di~a~~~~v~~l~~~a~~L~~~~~~~~---~~I 294 (635)
++|...++.+..||.+++..+.+.. +| .++..++. +++|+.|+.+|.++++.|..|...|..|+..+++.. ..|
T Consensus 5 ~~F~~~l~el~~WL~~~e~~l~~~~~~~-~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i 83 (119)
T 3uun_A 5 DRYQTALEEVLSWLLSAEDTLQAQGEIS-NDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEV 83 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 8999999999999999999987754 44 46777886 899999999999999999999999999998777654 469
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc
Q psy6471 295 HKRVQKLHQRWVALRSLLHSRLV 317 (635)
Q Consensus 295 ~~r~~~L~~~w~~L~~~~~~R~~ 317 (635)
..+++.|+.+|+.|...+..|+.
T Consensus 84 ~~~l~~l~~rw~~L~~~~~~R~~ 106 (119)
T 3uun_A 84 QEQMNLLNSRWECLRVASMEKQS 106 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999963
No 62
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=99.17 E-value=1.3e-12 Score=129.53 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=55.2
Q ss_pred ccccccccCCCCCCcccccC-CCCccCCC--------------CccCCCCCCc------cCCCC--------CCCccccC
Q psy6471 13 GLIVPKSKREGRQGVSSSQF-CSVRDTAS--------------RLTSSGDPNP------SFSLT--------NVKWNDVD 63 (635)
Q Consensus 13 ~~~~~~~~t~~y~~v~i~~f-~sw~dG~a--------------~~~~~~~~~~------~~~~~--------~l~~ed~~ 63 (635)
-|-||+.+ |+||+|+|| +||+||+| ||+.+++.++ +|++| +++|+||.
T Consensus 148 LL~W~~~~---~~~~~v~nFs~s~~dG~a~~aLi~~~~P~~i~~~~~l~~~~~~~n~~~a~~~A~~~lGi~~~l~peDi~ 224 (245)
T 2wa7_A 148 LLGWIQNK---IPYLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKPVDNAREAVQQADDWLGVPQVITPEEII 224 (245)
T ss_dssp HHHHHHHH---STTSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHSCCCCSSCHHHHT
T ss_pred HHHHHHHh---CCCCCCCCCcccchhhHHHHHHHHHHCccccccccccCcccHHHHHHHHHHHHHHhCCCCccCCHHHhc
Confidence 37899998 567999999 99999999 6677776553 33333 59999997
Q ss_pred CCCCCcchhHhhhhhhhcc
Q psy6471 64 THEIDEKSIITYISSLYDV 82 (635)
Q Consensus 64 ~~~pd~~sv~tyv~~~~~~ 82 (635)
.+.||++||||||++||++
T Consensus 225 ~~~~d~ksi~tyvs~~~~~ 243 (245)
T 2wa7_A 225 HPDVDEHSVMTYLSQFPKA 243 (245)
T ss_dssp CTTCCHHHHHHHHTHHHHC
T ss_pred cCCCcHHHHHHHHHHHhcc
Confidence 7899999999999999975
No 63
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=98.91 E-value=1e-10 Score=128.53 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=71.3
Q ss_pred cccccccC--CCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCC------CC-CCCccccCC
Q psy6471 14 LIVPKSKR--EGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFS------LT-NVKWNDVDT 64 (635)
Q Consensus 14 ~~~~~~~t--~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~------~~-~l~~ed~~~ 64 (635)
|-||+.++ +||+ |+|+|| +||+||+| ||+.+++.++ +|+ ++ +|+|+||..
T Consensus 167 L~W~n~~l~~~g~~-~~V~nFs~s~~DG~a~~aLl~~~~P~~i~~~~l~~~~~~~n~~~a~~~a~~lgi~~~l~peDi~~ 245 (513)
T 1rt8_A 167 LRWFNYHLKAANWP-RTVSNFSKDVSDGENYTVLLNQLAPELCSRAPLQTTDVLQRAEQVLQNAEKLDCRKYLTPTAMVA 245 (513)
T ss_dssp HHHHHHHHHHTTCS-CCCSCSSGGGTTSHHHHHHHHHHCTTTCCSGGGGCCCHHHHHHHHHHHHHTTTCCCSCCHHHHHT
T ss_pred HHHHHHHHHhcCCC-cCcccchhhhhccHHHHHHHHHHCccccccCCCCccCHHHHHHHHHHHHHHcCCCccCCHHHhcC
Confidence 78999875 5887 999999 99999999 6666665552 333 32 499999864
Q ss_pred CCCCcchhHhhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy6471 65 HEIDEKSIITYISSLYDVFPEPPAVHPLYDSESQQRVNEYCDLASSLHLWMREK 118 (635)
Q Consensus 65 ~~pd~~sv~tyv~~~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~Ll~WI~~~ 118 (635)
||++++||||+++|++|++.++...-...+++..-.+.++....+..||...
T Consensus 246 --~~~k~il~yva~l~~~~~~~~~~~~~~~~~~~~~~~e~~~q~k~f~~WiN~~ 297 (513)
T 1rt8_A 246 --GNPKLNLAFVAHLFNTHPGLEPLNEEEKPEIEPFDAEGEREARVFTLWLNSL 297 (513)
T ss_dssp --TCHHHHHHHHHHHHHHCCCCCC-------------CHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHhhhcccCcccchhhhhhhhhcchhHHHHHHHHHHHHhc
Confidence 7889999999999999999765432000011122224566778899999986
No 64
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=98.79 E-value=2.6e-10 Score=125.33 Aligned_cols=68 Identities=18% Similarity=0.178 Sum_probs=54.7
Q ss_pred ccccccccCC-CCCCcccccC--CCCccCCC-------------CccCCCCC----C------ccCCCC-------CCCc
Q psy6471 13 GLIVPKSKRE-GRQGVSSSQF--CSVRDTAS-------------RLTSSGDP----N------PSFSLT-------NVKW 59 (635)
Q Consensus 13 ~~~~~~~~t~-~y~~v~i~~f--~sw~dG~a-------------~~~~~~~~----~------~~~~~~-------~l~~ 59 (635)
-|.|||++|+ ||+||+|+|| +||+||+| ||+.+.+. + .+|++| +++|
T Consensus 413 LL~W~~~~~~~~~~~~~i~nF~~~s~~dG~a~~aLi~~~~P~~i~~~~l~~~~~~~~~~~n~~~af~~A~~lGi~~~l~p 492 (513)
T 1rt8_A 413 MVAWANSMAAKGGKGSQIRSFRDPSISTGVFVLDVLHGIKSEYVDYNLVTDGSTEELAIQNARLAISIARKLGAVIFILP 492 (513)
T ss_dssp HHHHHHHHHTTTCSSCCCSSTTCGGGGGSHHHHHHHHHHCGGGCCGGGCCCCCSHHHHHHHHHHHHHHHHHTTCCCCCCH
T ss_pred HHHHHHHHhhccCCCCCCCCCCcccccchHHHHHHHHHhCCCcCCHHhhccccChhhHHHHHHHHHHHHHHcCCCccCCH
Confidence 4789999997 7999999999 38999999 88888764 1 244444 5999
Q ss_pred cccCCCCCCcchhHhhhhhhhcc
Q psy6471 60 NDVDTHEIDEKSIITYISSLYDV 82 (635)
Q Consensus 60 ed~~~~~pd~~sv~tyv~~~~~~ 82 (635)
|||.... ++||||||++||+.
T Consensus 493 eDi~~~~--pksi~tyva~l~~~ 513 (513)
T 1rt8_A 493 EDIVAVR--PRLVLHFIGSLMAV 513 (513)
T ss_dssp HHHHTTC--HHHHHHHHHHHHTC
T ss_pred HHhcCCC--cccHHHHHHHHHhC
Confidence 9986544 49999999999973
No 65
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=98.74 E-value=3e-10 Score=124.62 Aligned_cols=70 Identities=13% Similarity=0.044 Sum_probs=57.5
Q ss_pred cccccccCCC-CCCcccccC--CCCccCCC-------------CccCCCCCC----------ccCCCC-------CCCcc
Q psy6471 14 LIVPKSKREG-RQGVSSSQF--CSVRDTAS-------------RLTSSGDPN----------PSFSLT-------NVKWN 60 (635)
Q Consensus 14 ~~~~~~~t~~-y~~v~i~~f--~sw~dG~a-------------~~~~~~~~~----------~~~~~~-------~l~~e 60 (635)
|.||+.+|++ |+||+|+|| +||+||+| ||+.+.+.+ .+|++| +++||
T Consensus 403 L~W~~~~~~~~~~~~~i~nF~d~s~~dG~a~~aLi~~~~P~li~~~~l~~~~s~~~~~~N~~~a~~~a~~lGi~~~l~pe 482 (506)
T 1pxy_A 403 LSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKGETDDEKRLNATYIVSVARKLGCSVFLLPE 482 (506)
T ss_dssp HHHHHHHHHTTTCCCCCSSTTCGGGGGCHHHHHHHHHHCGGGCCTTSCCCSCSHHHHHHHHHHHHHHHHHHTCCCCCCHH
T ss_pred HHHHHHHhhhcCCccccCCCCcccccchHHHHHHHHhhCCCeeehhhcccCCCchhHHHHHHHHHHHHHHcCCCCcCCHH
Confidence 7899999986 479999999 39999999 888887631 144444 49999
Q ss_pred ccCCCCCCcchhHhhhhhhhccCCC
Q psy6471 61 DVDTHEIDEKSIITYISSLYDVFPE 85 (635)
Q Consensus 61 d~~~~~pd~~sv~tyv~~~~~~~~~ 85 (635)
||.. ||++||||||++||++|-+
T Consensus 483 Di~~--~d~ksi~tyv~~l~~~~~~ 505 (506)
T 1pxy_A 483 DIVE--VNQKMILILTASIMYWSLQ 505 (506)
T ss_dssp HHHT--TCHHHHHHHHHHHHHHHTT
T ss_pred HccC--CChhHHHHHHHHHHHHHhh
Confidence 9963 7999999999999998753
No 66
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=98.62 E-value=2.1e-09 Score=117.88 Aligned_cols=102 Identities=12% Similarity=0.164 Sum_probs=66.7
Q ss_pred ccccccc--CCCCCCcccccC-CCCccCCC-------------CccCCCCCCc------cCCCC-------CCCccccCC
Q psy6471 14 LIVPKSK--REGRQGVSSSQF-CSVRDTAS-------------RLTSSGDPNP------SFSLT-------NVKWNDVDT 64 (635)
Q Consensus 14 ~~~~~~~--t~~y~~v~i~~f-~sw~dG~a-------------~~~~~~~~~~------~~~~~-------~l~~ed~~~ 64 (635)
|-||+.+ ++||+ |+|+|| +||+||+| ||+.+++.++ +|+++ +++|+||..
T Consensus 158 L~W~n~~l~~~g~~-~~v~nFs~s~~DG~a~~~Ll~~~~P~~i~~~~l~~~~~~~n~~~a~~~a~~lGi~~~l~peDi~~ 236 (506)
T 1pxy_A 158 LKWMNFHLKKGGYK-KTVSNFSADLKDAQAYAFLLNVLAPEHCDPATLDAKDPLERAELVLSHAERMNCKRYLTAEEIVE 236 (506)
T ss_dssp HHHHHHHHHHTTCC-SCCCCSSTTTTTSHHHHHHHHHHCGGGCCGGGGGCCSHHHHHHHHHHHHHHTTCCCCCCHHHHHT
T ss_pred HHHHHHHHHhcCCC-ccCccccccccchHHHHHHHHHhCccccccccCCcCCHHHHHHHHHHHHHHcCCCCcCCHHHHhc
Confidence 7899975 56896 999999 99999999 7777766553 23322 599999864
Q ss_pred CCCCcchhHhhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy6471 65 HEIDEKSIITYISSLYDVFPEPPAVHPLYDSESQQRVNEYCDLASSLHLWMREK 118 (635)
Q Consensus 65 ~~pd~~sv~tyv~~~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~Ll~WI~~~ 118 (635)
+++++|||||+++|++|++.+..+.+-..|...--.+-......+..||...
T Consensus 237 --~~~k~v~tyva~l~~~~~~~~~~~~~~~~~~~~~~~~~~~q~ktf~~WiN~~ 288 (506)
T 1pxy_A 237 --GSSTLNLAFVAQIFHERNGLNKDGKYAFAEMMTEDVETCRDERCYRLWINSL 288 (506)
T ss_dssp --TCHHHHHHHHHHHHHHCCCCC-------------CCHHHHHHHHHHHHHTTT
T ss_pred --CChhHHHHHHHHHhhhcCCCCCccccchhhhhhhhhHHHHHHHHHHHHHHhc
Confidence 3569999999999999999765433110000000011233455677788774
No 67
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=98.58 E-value=2.6e-09 Score=107.73 Aligned_cols=64 Identities=16% Similarity=0.240 Sum_probs=47.5
Q ss_pred cccccccC--CCCCCcccccC-CCCccCCC----------Cc------------cCCCCCCc------cCCCC-------
Q psy6471 14 LIVPKSKR--EGRQGVSSSQF-CSVRDTAS----------RL------------TSSGDPNP------SFSLT------- 55 (635)
Q Consensus 14 ~~~~~~~t--~~y~~v~i~~f-~sw~dG~a----------~~------------~~~~~~~~------~~~~~------- 55 (635)
|.||++++ .||++ |+|| +||+||+| ++ +.+++.++ +|++|
T Consensus 174 L~W~n~~l~~~g~~~--I~nF~~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~~~~~~~~~~~n~~~a~~~A~~lGi~~ 251 (275)
T 1aoa_A 174 LRWANFHLENSGWQK--INNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQ 251 (275)
T ss_dssp HHHHHHHHHHTTCCC--CSCSSTTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCCTTTTCSSHHHHHHHHHHHHTTTTCCC
T ss_pred HHHHHHHHHhcCCCc--chhhhhhhhhhHHHHHHHHHHCCCccccccccccccccCCCccCHHHHHHHHHHHHHHcCCCC
Confidence 78999966 56665 9999 99999999 32 22333331 23322
Q ss_pred CCCccccCCCCCCcchhHhhhhhhhc
Q psy6471 56 NVKWNDVDTHEIDEKSIITYISSLYD 81 (635)
Q Consensus 56 ~l~~ed~~~~~pd~~sv~tyv~~~~~ 81 (635)
+|+||||. .||+++|||||+++|+
T Consensus 252 ~l~peDi~--~~~~k~i~tyva~Lfn 275 (275)
T 1aoa_A 252 FVTPADVV--SGNPKLNLAFVANLFN 275 (275)
T ss_dssp SCCHHHHH--TTCHHHHHHHHHHHHC
T ss_pred cCCHHHcC--CCChhHHHHHHHHHhC
Confidence 49999996 4899999999999985
No 68
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=98.50 E-value=2.5e-09 Score=92.70 Aligned_cols=72 Identities=10% Similarity=0.034 Sum_probs=54.5
Q ss_pred cccccccCCC-CCCcccccC--CCCccCCC-------------CccCCCC-----CCc------cCCCC-------CCCc
Q psy6471 14 LIVPKSKREG-RQGVSSSQF--CSVRDTAS-------------RLTSSGD-----PNP------SFSLT-------NVKW 59 (635)
Q Consensus 14 ~~~~~~~t~~-y~~v~i~~f--~sw~dG~a-------------~~~~~~~-----~~~------~~~~~-------~l~~ 59 (635)
|.||+++++. |.+++|+|| +||+||++ ||+-+.+ .+. ++++| ++.|
T Consensus 13 l~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~ArklG~~~~l~p 92 (124)
T 1wjo_A 13 VNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVYALP 92 (124)
T ss_dssp HHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHHHTCCSCCCCH
T ss_pred HHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCCcccCH
Confidence 6799999985 678999999 89999999 7773332 221 33333 5999
Q ss_pred cccCCCCCCcchhHhhhhhhhccCCCCC
Q psy6471 60 NDVDTHEIDEKSIITYISSLYDVFPEPP 87 (635)
Q Consensus 60 ed~~~~~pd~~sv~tyv~~~~~~~~~~~ 87 (635)
||+.-. ++++|||||+++|+++-+.+
T Consensus 93 EDIve~--~pK~ilt~va~l~~~~~~~~ 118 (124)
T 1wjo_A 93 EDLVEV--KPKMVMTVFACLMGRGMKRV 118 (124)
T ss_dssp HHHHHT--CTTTTTHHHHHHHHHSCCCC
T ss_pred HHHhcC--cchhhHHHHHHHHHHHhhcc
Confidence 998433 45999999999999886654
No 69
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=98.42 E-value=2.9e-06 Score=73.52 Aligned_cols=117 Identities=19% Similarity=0.351 Sum_probs=98.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHHHHHhcC
Q psy6471 95 SESQQRVNEYCDLASSLHLWMREKTAYMQDRNFPSTLIEMKKLAADSARFRTEEVPPRQRDKQRLQHIFQDLTKYFEDVG 174 (635)
Q Consensus 95 ~e~~~~~~~y~~~~~~Ll~WI~~~~~~l~~~~~~~sl~~vq~~l~~~~~f~~~E~~~~~~ek~~le~l~~~l~~~~~~~~ 174 (635)
..++.+.-+|-+.|+-+..|++.+...|.+....+|+.+|+.++.+|..|+. +.|....+...+..|...+.....+.+
T Consensus 8 e~id~L~leFAKrAa~fNnW~e~A~EdL~D~~~v~sleEI~~L~~~He~F~~-~L~~a~~e~~~i~~i~~el~~~~~~~~ 86 (129)
T 1wlx_A 8 EAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKS-TLPDADREREAILAIHKEAQRIAESNH 86 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhHHHHhccchhhccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3577889999999999999999999999976677999999999999999997 788888888888777788877776666
Q ss_pred CC--cCCC--CCChHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy6471 175 EV--DIDP--ELHIDVIERNWSRLLAAHQEKDSILQDEIKRL 212 (635)
Q Consensus 175 ~~--~~~~--~~~~~~i~~~W~~L~~~~~~r~~~L~~el~rl 212 (635)
-. ...| ..++.+|...|+.+.....+|...|..|..|+
T Consensus 87 ~~~~~~npYT~it~~~l~~~W~~l~~li~~Rd~~Lq~E~~RQ 128 (129)
T 1wlx_A 87 IKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQ 128 (129)
T ss_dssp CCCSSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 31 1123 36799999999999999999999999887764
No 70
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=98.39 E-value=5.9e-06 Score=71.56 Aligned_cols=110 Identities=15% Similarity=0.229 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhcccCCCCCCChHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy6471 495 AEEDMKNATKLFTEKASNLQSKLDEAERTLHSRINAPVPRDLDSLEHLVLQHKDFESTLKNLMSDLEKREIQFSAVQDRG 574 (635)
Q Consensus 495 R~~~Le~~L~~F~~~~~e~~~Wl~eke~~l~s~~~~~~~~dl~~v~~ll~kh~~~~~~~~~l~~el~~~~~~~~~v~~~g 574 (635)
|.++|++-...|-..+.-+.+|+...+.-|... -....++.|+.|+.+|.+|.+ ++...++.++.|...+
T Consensus 6 ~le~id~L~leFAKrAa~fNnW~e~A~EdL~D~---~~v~sleEI~~L~~~He~F~~-------~L~~a~~e~~~i~~i~ 75 (129)
T 1wlx_A 6 QLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDM---FIVHTIEEIEGLISAHDQFKS-------TLPDADREREAILAIH 75 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCCSHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhHHHHhccc---hhhccHHHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHH
Confidence 667775555799999999999999999999842 256889999999999999999 9988888888887776
Q ss_pred HHHHh---cCC----CC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6471 575 EALIL---QHH----PA--AKCIEAYMAAMQSQWAWLLQLALCLETHLKHA 616 (635)
Q Consensus 575 ~~L~~---~~h----~~--~~~I~~~l~~L~~~W~~L~~~~~~R~~~L~~a 616 (635)
+.|-. +.+ +. ...|. .+.|..+|+.|..++..|...|++=
T Consensus 76 ~el~~~~~~~~~~~~~~npYT~it--~~~l~~~W~~l~~li~~Rd~~Lq~E 124 (129)
T 1wlx_A 76 KEAQRIAESNHIKLSGSNPYTTVT--PQIINSKWEKVQQLVPKRDHALLEE 124 (129)
T ss_dssp HHHHHHHHHSCCCCSSSCSSCCCC--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCCCCCCccch--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66553 112 11 11232 8899999999999999999999764
No 71
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=35.94 E-value=1.7e+02 Score=23.41 Aligned_cols=29 Identities=21% Similarity=0.426 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHhh
Q psy6471 216 QRLAEKVTREMKRVDGRLEELESRINEEA 244 (635)
Q Consensus 216 ~~la~~F~~~~~~~~~WL~~~e~~l~~~~ 244 (635)
..++.+|...+.....||.+.|..|.+..
T Consensus 11 ~~lv~~fe~rL~~Yr~~IeelE~~L~s~s 39 (93)
T 3t98_B 11 RVLVQQFEVQLQQYRQQIEELENHLATQA 39 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34568899999999999999999987654
No 72
>1pzq_A Erythronolide synthase; four helix bundle, homodimer, transferase; NMR {Saccharopolyspora erythraea} SCOP: a.34.3.1
Probab=22.54 E-value=1.9e+02 Score=19.72 Aligned_cols=34 Identities=21% Similarity=0.461 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhcCCCCChhhHHHHHHHHHHHHHH
Q psy6471 272 NINTLFSDVQTLREGRYPQASDLHKRVQKLHQRWVA 307 (635)
Q Consensus 272 ~v~~l~~~a~~L~~~~~~~~~~I~~r~~~L~~~w~~ 307 (635)
+++.|...-..|..+. .-++|-+|++.|..+|+.
T Consensus 13 rldelekalealsaed--ghddvgqrlesllrrwns 46 (60)
T 1pzq_A 13 RLDELEKALEALSAED--GHDDVGQRLESLLRRWNS 46 (60)
T ss_dssp HHHHHHHHHHHHTTSS--CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccc--cccHHHHHHHHHHHHHhh
Confidence 4444444444454433 235688888888888875
No 73
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=21.23 E-value=3.7e+02 Score=22.55 Aligned_cols=16 Identities=13% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHhHHHHHHHhhc
Q psy6471 511 SNLQSKLDEAERTLHS 526 (635)
Q Consensus 511 ~e~~~Wl~eke~~l~s 526 (635)
.+.+.|-..|-..+..
T Consensus 7 ~eaE~~y~~K~eel~~ 22 (129)
T 3tnu_B 7 TEAESWYQTKYEELQQ 22 (129)
T ss_dssp ----------------
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4566777777666654
No 74
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=20.83 E-value=1.9e+02 Score=20.36 Aligned_cols=34 Identities=18% Similarity=0.497 Sum_probs=25.6
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q psy6471 466 DPSDPQLRRLRREMDEVNRLFDEFERRAR-AEEDM 499 (635)
Q Consensus 466 ~~~~~~~~~I~~~~~~L~~~~~~L~~~~~-R~~~L 499 (635)
.|...+++.++.....|..++..|..... -..+|
T Consensus 15 ~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 15 TPENPEIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567888899999999999998888766 44443
Done!