BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy6473
MEFKLQTLFISETIMQLNEEDEAGSSMTGGDSPLTARTQRLERVAQALAHSQEELRRLVK
Y

High Scoring Gene Products

Symbol, full name Information P value
Liprin-alpha protein from Drosophila melanogaster 1.0e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy6473
        (61 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0046704 - symbol:Liprin-alpha "Liprin-alpha" speci...   126  1.0e-06   1


>FB|FBgn0046704 [details] [associations]
            symbol:Liprin-alpha "Liprin-alpha" species:7227 "Drosophila
            melanogaster" [GO:0008594 "photoreceptor cell morphogenesis"
            evidence=IMP] [GO:0045202 "synapse" evidence=IDA] [GO:0007416
            "synapse assembly" evidence=IMP] [GO:0048490 "anterograde synaptic
            vesicle transport" evidence=IMP] [GO:0045467 "R7 cell development"
            evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
            evidence=IMP] [GO:0007412 "axon target recognition" evidence=IMP]
            [GO:0048786 "presynaptic active zone" evidence=IDA] [GO:0007411
            "axon guidance" evidence=IMP] [GO:0048841 "regulation of axon
            extension involved in axon guidance" evidence=IMP] [GO:0048675
            "axon extension" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
            [GO:0051124 "synaptic growth at neuromuscular junction"
            evidence=IMP] [GO:0005925 "focal adhesion" evidence=IDA]
            InterPro:IPR001660 InterPro:IPR011510 Pfam:PF07647 PROSITE:PS50105
            SMART:SM00454 GO:GO:0043234 EMBL:AE014134 GO:GO:0045467
            GO:GO:0051124 GO:GO:0048786 GO:GO:0005925 Gene3D:1.10.150.50
            InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
            GO:GO:0048490 GO:GO:0007412 GO:GO:0031290 GO:GO:0008594
            GO:GO:0048676 GO:GO:0048841 GeneTree:ENSGT00660000095409
            eggNOG:NOG322697 EMBL:BT004484 RefSeq:NP_609067.2
            RefSeq:NP_723208.1 UniGene:Dm.12197 SMR:Q9VM93 IntAct:Q9VM93
            MINT:MINT-1551369 STRING:Q9VM93 EnsemblMetazoa:FBtr0079300
            EnsemblMetazoa:FBtr0079301 GeneID:249072 KEGG:dme:Dmel_CG11199
            UCSC:CG11199-RA CTD:249072 FlyBase:FBgn0046704 InParanoid:Q9VM93
            OMA:HMPLSSH OrthoDB:EOG4RBP0H ChiTaRS:Liprin-alpha
            GenomeRNAi:249072 NextBio:843461 Uniprot:Q9VM93
        Length = 1201

 Score = 126 (49.4 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 28/35 (80%), Positives = 30/35 (85%)

Query:    24 GSSMTGGD-SPLTARTQRLERVAQALAHSQEELRR 57
             G S +GG  SPLTAR+ RLERVAQALAHSQEELRR
Sbjct:   737 GDSSSGGAASPLTARSMRLERVAQALAHSQEELRR 771


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.127   0.325    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       61        61   0.00091  102 3  10 23  0.36    28
                                                     29  0.39    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  476 (51 KB)
  Total size of DFA:  87 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:04
  No. of threads or processors used:  24
  Search cpu time:  11.39u 0.06s 11.45t   Elapsed:  00:00:29
  Total cpu time:  11.39u 0.06s 11.45t   Elapsed:  00:00:33
  Start:  Thu Aug 15 13:59:04 2013   End:  Thu Aug 15 13:59:37 2013

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