RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6474
(381 letters)
>d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 342
Score = 268 bits (685), Expect = 3e-88
Identities = 117/341 (34%), Positives = 177/341 (51%), Gaps = 9/341 (2%)
Query: 31 LRLIHVIFRHGHRTPADTYPNDPYAKHSFEPFGWGQLTNVGKRAQFAQGEFLRRPYDSFL 90
L+ + ++FRHG R+P DT+P DP K S P G+GQLT +G + GE++R+ Y FL
Sbjct: 3 LKFVTLVFRHGDRSPIDTFPTDPI-KESSWPQGFGQLTQLGMEQHYELGEYIRKRYRKFL 61
Query: 91 GDRYSPDYLKVQCTDVDRTKMSTMLFLAGLFPPKGDQVWNPNLLWQPIPLNYETMKYDRL 150
+ Y + + ++ TDVDRT MS M LA LFPP+G +WNP LLWQPIP++ + D+L
Sbjct: 62 NESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLSEDQL 121
Query: 151 LLGRY-PCPRYQEELDNVFNSPEVRAILEANKNLLDYASKESGMPIVTP-DDAQSLYSTL 208
L + CPR+QE S E + L K+ + K SG+ +Y L
Sbjct: 122 LYLPFRNCPRFQELESETLKSEEFQKRLHPYKDFIATLGKLSGLHGQDLFGIWSKVYDPL 181
Query: 209 KAERELGLTLPAWTNAIFPDPLSKITAQSFV---INAMTPVLQRLKGGFLLKKIIEDTND 265
E TLP+W L +++ S + RL+GG L+ +I+
Sbjct: 182 YCESVHNFTLPSWATEDTMTKLRELSELSLLSLYGIHKQKEKSRLQGGVLVNEILNHMKR 241
Query: 266 KLSGRTKMKMFVYGAHDSTIANFLLTLGVWDMQIPEYNSLIILEVHQLQPGRHGIRVFLR 325
+ K+ +Y AHD+T++ + L V++ +P Y S + E++ + G + + ++ R
Sbjct: 242 ATQIPSYKKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHLTELYF-EKGEYFVEMYYR 300
Query: 326 N-TTSEPYLLQIPGCSKICPWENFVSLTSSKIPVRSYDEEC 365
N T EPY L +PGCS CP E F L IP + + EC
Sbjct: 301 NETQHEPYPLMLPGCSPSCPLERFAELVGPVIP-QDWSTEC 340
>d1dkla_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Escherichia coli [TaxId: 562]}
Length = 409
Score = 187 bits (474), Expect = 5e-56
Identities = 61/413 (14%), Positives = 107/413 (25%), Gaps = 78/413 (18%)
Query: 26 EQDGTLRLIHVIFRHGHRTPADT----YPNDPYAKHSFEPFGWGQLTNVGKRAQFAQGEF 81
E + L + ++ RHG R P P A ++ P G LT G G +
Sbjct: 2 EPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWPTW-PVKLGWLTPRGGELIAYLGHY 60
Query: 82 LRRPYDSFL----GDRYSPDYLKVQCTDVDRTKMSTMLFLAGLFPPKGDQVW------NP 131
R+ + + + +RT+ + F AGL P V +P
Sbjct: 61 QRQRLVADGLLAKKGCPQSGQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSP 120
Query: 132 NLLWQPIPLNYETMKYDRLLLG-----RYPCPRYQEELDNVFN------------SPEVR 174
+ L+ P+ + + + F R
Sbjct: 121 DPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKR 180
Query: 175 AILEANKNLLDYASKESGMPIVTPD------DAQSLYSTLKAERELGLTLPAWTNAIFPD 228
+ + +L E + A L ++ G+ P W
Sbjct: 181 EKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSH 240
Query: 229 ---PLSKITAQSFVINAMTPVLQRLKGGFLLKKIIEDTNDKLSGRTKM------KMFVYG 279
L + F + TP + R + LL I + +
Sbjct: 241 QWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIA 300
Query: 280 AHDSTIANFLLTLGVWDMQ-----IPEYNSLIILEVHQ-LQPGRHGIRVFLRNTTSE--- 330
HD+ +AN L + ++ E + L I+V L T +
Sbjct: 301 GHDTNLANLGGALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMR 360
Query: 331 ------------PYLLQIPGCS-----KICPWENFVSLTSSKIPVRSYDEECQ 366
L + GC +C F + + C
Sbjct: 361 DKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEAR-----IPACS 408
>d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli
[TaxId: 562]}
Length = 391
Score = 177 bits (450), Expect = 1e-52
Identities = 58/385 (15%), Positives = 112/385 (29%), Gaps = 60/385 (15%)
Query: 30 TLRLIHVIFRHGHRTPADTYPNDPYA----KHSFEPFGWGQLTNVGKRAQFAQGEFLRRP 85
L+ + ++ R R P + K GQLT G + G ++R
Sbjct: 8 QLQQVLMMSRANLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREW 67
Query: 86 YDSF----LGDRYSPDYLKVQCTDVDRTKMSTMLFLAGLFPPKGDQVWNPNLLWQPIPLN 141
G+ P + + RT + F+ G FP V + + P
Sbjct: 68 LAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTF 127
Query: 142 YETMKYDRLLLGRYPCPRYQEELDNVFNSPEVRAI-------------LEANKNLLDYAS 188
+ D ++EL + + + + + +L+D +
Sbjct: 128 NPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKN 187
Query: 189 KESGMPIVTP------DDAQSLYSTLKAERELGLTLP--AWTNAIFPDPLSKITA---QS 237
S P SL + G + AW ++
Sbjct: 188 TFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGY 247
Query: 238 FVINAMTPVLQRLKGGFLLKKIIEDTNDKLSGRTKMKMFVYGAHDSTIANFLLTLGVWDM 297
+P + R L+ I + + + K+ V HDS IA+ L L
Sbjct: 248 QDSLFTSPEVARNVAKPLVSYIDKALVTDRT--SAPKITVLVGHDSNIASLLTALDFKPY 305
Query: 298 QIPE------YNSLIILEVHQ-LQPGRHGIRVFLRNTTSE---------------PYLLQ 335
Q+ + I+ + + R +++ ++E L+
Sbjct: 306 QLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLE 365
Query: 336 IPGCSK----ICPWENFVSLTSSKI 356
+ GC CP + F S+ + +
Sbjct: 366 LSGCPIDADGFCPMDKFDSVLNEAV 390
>d1qwoa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus fumigatus [TaxId: 5085]}
Length = 435
Score = 170 bits (432), Expect = 1e-49
Identities = 56/405 (13%), Positives = 106/405 (26%), Gaps = 81/405 (20%)
Query: 30 TLRLIHVIFRHGHRTP-----------------ADTYPNDPYA--KHSFEPFGWGQLTNV 70
+ L+ V+ RHG R P T +A K G LT
Sbjct: 42 RITLVQVLSRHGARYPTSSKSKKYKKLVTAIQANATDFKGKFAFLKTYNYTLGADDLTPF 101
Query: 71 GKRAQFAQGEFLRRPYDSFLGDRYSPDYLKVQCTDVDRTKMSTMLFLAGLFPPKGDQVWN 130
G++ G + Y ++ + DR S F+ G K
Sbjct: 102 GEQQLVNSGIKFYQRY----KALARSVVPFIRASGSDRVIASGEKFIEGFQQAKLADPGA 157
Query: 131 PNLLWQPIPLNYETMKYDRLLLGRYPCPRYQEELDNVFNSPEVRAILEANKNLLDYASKE 190
N I + + L C +++ + A+ ++ A K
Sbjct: 158 TNRAAPAISVIIPESETFNNTLDHGVCTKFEASQLGDEVAANFTALF--APDIRARAEKH 215
Query: 191 SGMPIVTPDDAQSLYSTLKAE----RELGLTLPAWTNAIFPDPLSKI------------- 233
+T +D SL + L + + K
Sbjct: 216 LPGVTLTDEDVVSLMDMCSFDTVARTSDASQLSPFCQLFTHNEWKKYNYLQSLGKYYGYG 275
Query: 234 ----TAQSFVINAMTPVLQRLKGGFLLKKIIEDTNDKLSGRT---KMKMFVYGAHDSTIA 286
+ I ++ RL + ++ + T M+V +HD+++
Sbjct: 276 AGNPLGPAQGIGFTNELIARLTRSPVQDHTSTNSTLVSNPATFPLNATMYVDFSHDNSMV 335
Query: 287 NFLLTLGVWDM---------------------QIPEYNSLIILEVHQL-QPGRHGIRVFL 324
+ LG+++ + + + E Q +R +
Sbjct: 336 SIFFALGLYNGTEPLSRTSVESAKELDGYSASWVVPFGARAYFETMQCKSEKEPLVRALI 395
Query: 325 RNTTSEPYLLQIPGCSK----ICPWENFVSLTSSKIPVRSYDEEC 365
+ + + GC C +FV S EC
Sbjct: 396 NDRV-----VPLHGCDVDKLGRCKLNDFVKGLSWARS-GGNWGEC 434
>d1ihpa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus ficuum [TaxId: 5058]}
Length = 438
Score = 166 bits (420), Expect = 7e-48
Identities = 61/421 (14%), Positives = 112/421 (26%), Gaps = 85/421 (20%)
Query: 19 HTVTSSDEQDG-TLRLIHVIFRHGHRTPAD-----------------TYPNDPYA--KHS 58
+V S + G + V+ RHG R P D T + YA K
Sbjct: 31 ESVISPEVPAGCRVTFAQVLSRHGARYPTDSKGKKYSALIEEIQQNATTFDGKYAFLKTY 90
Query: 59 FEPFGWGQLTNVGKRAQFAQGEFLRRPYDSFLGDRYSPDYLKVQCTDVDRTKMSTMLFLA 118
G LT G++ G + Y+S ++ + R S F+
Sbjct: 91 NYSLGADDLTPFGEQELVNSGIKFYQRYESL----TRNIVPFIRSSGSSRVIASGKKFIE 146
Query: 119 GLFPPKGDQVWNPNLLWQPIPLNY--ETMKYDRLLLGRYPCPRYQEELDNVFNSPEVRAI 176
G K P E + L EL + +
Sbjct: 147 GFQSTKLKDPRAQPGQSSPKIDVVISEASSSNNTLDPGTCTVFEDSELADTVEANFTATF 206
Query: 177 LEANKNLLDYASKESGMPIVTPDDAQSLYSTLK----AERELGLTLPAWTNAIFPDPLSK 232
+ + + L + +T + L + + L + + D
Sbjct: 207 VPSIRQRL---ENDLSGVTLTDTEVTYLMDMCSFDTISTSTVDTKLSPFCDLFTHDEWIN 263
Query: 233 I-----------------TAQSFVINAMTPVLQRLKGGFLLKKIIEDTNDKLSGRT---K 272
+ + ++ RL + + S T
Sbjct: 264 YDYLQSLKKYYGHGAGNPLGPTQGVGYANELIARLTHSPVHDDTSSNHTLDSSPATFPLN 323
Query: 273 MKMFVYGAHDSTIANFLLTLGVWDMQIPE---------------------YNSLIILEVH 311
++ +HD+ I + L LG+++ P + S + +E+
Sbjct: 324 STLYADFSHDNGIISILFALGLYNGTKPLSTTTVENITQTDGFSSAWTVPFASRLYVEMM 383
Query: 312 QL-QPGRHGIRVFLRNTTSEPYLLQIPGCS----KICPWENFVSLTSSKIPVRSYDEECQ 366
Q +RV + + + + GC C ++FV S EC
Sbjct: 384 QCQAEQEPLVRVLVNDRV-----VPLHGCPVDALGRCTRDSFVRGLSFARS-GGDWAECF 437
Query: 367 A 367
A
Sbjct: 438 A 438
>d1qfxa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus niger [TaxId: 5061]}
Length = 447
Score = 138 bits (348), Expect = 2e-37
Identities = 52/396 (13%), Positives = 87/396 (21%), Gaps = 84/396 (21%)
Query: 30 TLRLIHVIFRHGHRTPADTYPND----------------------------PYAKHSFEP 61
+ + ++ RHG R P+ + D +
Sbjct: 40 EVDQVIMVKRHGERYPSPSAGKDIEEALAKVYSINTTEYKGDLAFLNDWTYYVPNECYYN 99
Query: 62 FGWGQLTNVGKRAQFAQGEFLRRPYDSFLGDRYSPDYLKVQCTDVDRTKMSTMLFLAGLF 121
G + G + Y + R + F G F
Sbjct: 100 AETTSGPYAGLLDAYNHGNDYKARYGHLWNGETVV---PFFSSGYGRVIETARKFGEGFF 156
Query: 122 PPKGDQVWNPNLLWQPIPLNYETMKYDRLLLGRYPCPRYQEELDNVFNSPEVRAILEANK 181
++ N I ++ P + D + L K
Sbjct: 157 GYN----YSTNAALNIIS-------ESEVMGADSLTPTCDTDNDQT-TCDNLTYQLPQFK 204
Query: 182 NLLDYASKESGMPIVTPDDAQSLYSTLKAERELGLTLPAWTNAIFPDPLSKI----TAQS 237
+ ++ +T D +L E W NA D
Sbjct: 205 VAAARLNSQNPGMNLTASDVYNLMVMASFELNARPFSN-WINAFTQDEWVSFGYVEDLNY 263
Query: 238 FVINAMTPVLQRLKGGFLLKKIIEDTNDKLSGRTKMKMFVYGAHDSTIANFLLTLGVWDM 297
+ G + N +F AHD+ I L LGV
Sbjct: 264 YYCAGPGDKNMAAVGAVYANASLTLLNQGPKEAG--SLFFNFAHDTNITPILAALGVLIP 321
Query: 298 ------------------QIPEYNSLIILEVHQ-----LQPGRHGIRVFLRNTTSEPYLL 334
I + +E L +R+ L L
Sbjct: 322 NEDLPLDRVAFGNPYSIGNIVPMGGHLTIERLSCQATALSDEGTYVRLVLNEAV-----L 376
Query: 335 QIPGCSK----ICPWENFVSLTSSKIPVRSYDEECQ 366
C+ CP N+ S+ + +P Y C
Sbjct: 377 PFNDCTSGPGYSCPLANYTSILNKNLP--DYTTTCN 410
>d1eqka_ d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza sativa),
subsp. japonica, oryzacystatin-I [TaxId: 4530]}
Length = 102
Score = 27.9 bits (62), Expect = 0.67
Identities = 6/25 (24%), Positives = 8/25 (32%), Gaps = 7/25 (28%)
Query: 338 GCSKIC-------PWENFVSLTSSK 355
K+ PW +F L K
Sbjct: 70 DAKKLYEAKVWEKPWMDFKELQEFK 94
>d1do5a_ b.1.8.1 (A:) Copper chaperone for superoxide dismutase,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 154
Score = 27.7 bits (61), Expect = 1.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 298 QIPEYNSLIILEVHQLQPGRHGIRV 322
Q+ LI + L+PG HG+ V
Sbjct: 24 QLTPERCLIEGTIDGLEPGLHGLHV 48
>g1gxs.1 c.69.1.5 (A:,B:) Hydroxynitrile lyase {Sorghum (Sorghum
bicolor) [TaxId: 4558]}
Length = 425
Score = 26.7 bits (58), Expect = 6.0
Identities = 17/75 (22%), Positives = 23/75 (30%)
Query: 140 LNYETMKYDRLLLGRYPCPRYQEELDNVFNSPEVRAILEANKNLLDYASKESGMPIVTPD 199
+ E Y R P N N PEV+ L AN + + +
Sbjct: 255 CDREPSPYQRRFWLPPYDPCAVFNSINYLNLPEVQTALHANVSGIVEYPWTVCSNTIFDQ 314
Query: 200 DAQSLYSTLKAEREL 214
Q+ L REL
Sbjct: 315 WGQAADDLLPVYREL 329
>d1hx8a2 a.118.9.3 (A:22-161) AP180 (Lap) {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 140
Score = 25.7 bits (56), Expect = 7.1
Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 30 TLRLIHVIFRHGHRTPADTY--PNDPYAKHSFEPFGWGQLTNVGK---RAQFAQGEFLRR 84
+L H + +G+ N + SF G Q +G R + F+RR
Sbjct: 59 SLITTHHLMAYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRR 118
Query: 85 PYDSFLGDR 93
Y +L ++
Sbjct: 119 -YAKYLNEK 126
>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas
vaginalis, MGL2 [TaxId: 5722]}
Length = 331
Score = 26.4 bits (57), Expect = 7.2
Identities = 24/218 (11%), Positives = 41/218 (18%), Gaps = 16/218 (7%)
Query: 19 HTVTSSDEQDGTLRLIHVIFRHGHRTPADTYPNDPY---AKHSFEPFGWGQLTNVGKRAQ 75
H ++ T L R P T +
Sbjct: 39 HLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYFETPANPTLK 98
Query: 76 FAQGEFLRRPYDSFLG-------DRYSPDYLKVQCTDVDRTKMSTMLFLAGLFPPKGDQV 128
E + SP VD S ++ G V
Sbjct: 99 VIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLV 158
Query: 129 WNPNLLWQPIPLNYETMKYDRLLLGRYPCPRYQEELDNVFNSPEVRAILEANKNLLDYAS 188
+ + + + G P + + ++R + A +N A
Sbjct: 159 CSRADIIAKVKSQGIKD-----ITGAIISPHDAWLITRGTLTLDMR-VKRAAENAQKVAE 212
Query: 189 KESGMPIVTPDDAQSLYSTLKAERELGLTLPAWTNAIF 226
V L E + F
Sbjct: 213 FLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAF 250
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.424
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,453,479
Number of extensions: 69390
Number of successful extensions: 163
Number of sequences better than 10.0: 1
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 12
Length of query: 381
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 294
Effective length of database: 1,213,086
Effective search space: 356647284
Effective search space used: 356647284
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.2 bits)