Query psy648
Match_columns 72
No_of_seqs 74 out of 76
Neff 4.1
Searched_HMMs 13730
Date Fri Aug 16 19:10:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy648.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/648hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lrza1 a.2.7.4 (A:245-309) Me 66.4 4.5 0.00033 22.4 4.0 26 46-71 3-28 (65)
2 d1ivsa1 a.2.7.3 (A:797-862) Va 58.8 7.4 0.00054 20.6 3.9 24 48-71 6-29 (66)
3 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 53.4 12 0.00089 21.0 4.3 29 43-71 37-65 (67)
4 d1fxka_ a.2.5.1 (A:) Prefoldin 52.7 11 0.00078 21.5 4.2 25 45-69 71-95 (107)
5 d3b8ma1 d.58.60.1 (A:64-330) E 52.5 26 0.0019 22.8 7.0 40 20-61 126-165 (267)
6 d3b8oa1 d.58.60.1 (A:55-319) L 48.0 32 0.0024 22.5 7.0 44 16-62 120-163 (265)
7 d3b8pa1 d.58.60.1 (A:54-292) C 44.4 36 0.0026 21.9 6.8 41 20-62 96-136 (239)
8 d1vp7a_ a.7.13.1 (A:) Exonucle 43.7 20 0.0014 19.5 4.2 21 41-61 43-63 (68)
9 d1r8da_ a.6.1.3 (A:) Multidrug 43.0 24 0.0017 19.5 4.9 43 29-71 61-107 (109)
10 d1q08a_ a.6.1.3 (A:) Transcrip 40.5 27 0.002 19.4 4.8 17 45-61 45-61 (94)
11 d2rfra1 d.17.4.28 (A:1-153) Un 35.6 18 0.0013 20.4 3.3 19 48-66 4-22 (153)
12 d1q06a_ a.6.1.3 (A:) Transcrip 35.3 30 0.0022 19.6 4.3 22 46-67 86-107 (127)
13 d1tqga_ a.24.10.3 (A:) Chemota 35.2 32 0.0023 18.7 4.3 28 34-61 4-31 (105)
14 d1eqfa1 a.29.2.1 (A:1359-1497) 31.8 46 0.0033 19.5 5.0 24 39-62 114-137 (139)
15 d1ydxa2 d.287.1.2 (A:194-374) 29.9 44 0.0032 18.8 5.2 27 31-61 142-168 (181)
16 d1seta1 a.2.7.1 (A:1-110) Sery 27.3 44 0.0032 18.6 4.0 26 45-70 70-95 (110)
17 d1gnwa1 a.45.1.1 (A:86-211) Cl 26.3 41 0.003 18.9 3.7 23 49-71 49-71 (126)
18 d1hs7a_ a.47.2.1 (A:) Vam3p N- 26.1 42 0.0031 19.8 3.8 25 47-71 4-28 (97)
19 d1aw9a1 a.45.1.1 (A:83-217) Cl 26.0 35 0.0025 18.9 3.3 22 50-71 50-71 (135)
20 d2oy9a1 a.276.1.1 (A:6-90) Unc 25.7 12 0.00086 21.8 1.1 15 15-29 6-20 (85)
21 d1m47a_ a.26.1.2 (A:) Interleu 24.0 16 0.0012 22.7 1.6 32 19-50 77-126 (128)
22 d1cxzb_ a.2.6.1 (B:) Protein k 23.4 47 0.0034 19.1 3.6 24 45-68 62-85 (86)
23 d1ofcx1 a.4.1.3 (X:799-850) SA 23.4 21 0.0015 18.8 1.8 17 16-32 1-17 (52)
24 d1jlwa1 a.45.1.1 (A:91-217) Cl 23.0 39 0.0028 18.6 3.1 19 53-71 43-61 (127)
25 d2gmya1 a.152.1.3 (A:2-148) Hy 23.0 64 0.0047 18.3 4.9 36 6-43 103-138 (147)
26 d1yf2a2 d.287.1.2 (A:221-425) 22.0 64 0.0046 17.9 6.1 25 32-60 163-187 (205)
27 d1r5aa1 a.45.1.1 (A:87-215) Cl 21.7 41 0.003 18.5 3.1 20 52-71 40-59 (129)
28 d1gqea_ e.38.1.1 (A:) Polypept 20.3 55 0.004 22.5 4.0 11 61-71 30-40 (362)
No 1
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=66.35 E-value=4.5 Score=22.38 Aligned_cols=26 Identities=15% Similarity=0.151 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy648 46 SRLAVLNEKLTTLERRIEYLEARKSH 71 (72)
Q Consensus 46 ~kLa~ln~KL~~LE~~L~~LEAklss 71 (72)
+.|..|+.+...|+.+|.-+++.+.+
T Consensus 3 eYl~~L~~~~~~L~~~i~k~~~~lek 28 (65)
T d1lrza1 3 EYIKELNEERDILNKDLNKALKDIEK 28 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777777777777766643
No 2
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=58.84 E-value=7.4 Score=20.62 Aligned_cols=24 Identities=13% Similarity=0.034 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Q psy648 48 LAVLNEKLTTLERRIEYLEARKSH 71 (72)
Q Consensus 48 La~ln~KL~~LE~~L~~LEAklss 71 (72)
++.|+-+|..++..+..++.+|+.
T Consensus 6 ~~RL~K~l~kl~~~i~~~~~kL~N 29 (66)
T d1ivsa1 6 RRRQEKRLKELLALAERSQRKLAS 29 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC
Confidence 456777777777888777777764
No 3
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.41 E-value=12 Score=21.02 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy648 43 SCRSRLAVLNEKLTTLERRIEYLEARKSH 71 (72)
Q Consensus 43 sc~~kLa~ln~KL~~LE~~L~~LEAklss 71 (72)
.|+..|-.|++.|..=-=++.||.+-|++
T Consensus 37 rCk~~irrLeqel~~ErF~~iYLQt~LA~ 65 (67)
T d1k1fa_ 37 RAKASIRRLEQEVNQERFRMIYLQTLLAK 65 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 69999999999999888899999998875
No 4
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=52.67 E-value=11 Score=21.55 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy648 45 RSRLAVLNEKLTTLERRIEYLEARK 69 (72)
Q Consensus 45 ~~kLa~ln~KL~~LE~~L~~LEAkl 69 (72)
..++..++.++.+|+.++..++.++
T Consensus 71 ~~~~e~l~~~i~~l~~q~~~l~~~l 95 (107)
T d1fxka_ 71 QEKLETLQLREKTIERQEERVMKKL 95 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666666554
No 5
>d3b8ma1 d.58.60.1 (A:64-330) Enterochelin transport protein FepE {Escherichia coli [TaxId: 562]}
Probab=52.46 E-value=26 Score=22.76 Aligned_cols=40 Identities=18% Similarity=0.226 Sum_probs=29.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy648 20 REYIEIITGSIKKITDFLNSFDMSCRSRLAVLNEKLTTLERR 61 (72)
Q Consensus 20 Re~i~~in~~I~~~~~FLN~F~~sc~~kLa~ln~KL~~LE~~ 61 (72)
++||.++|.-+.+-. .+.|...-..|+..+..+++..|..
T Consensus 126 ~~YI~~v~~~v~~~l--~~~~~~~i~~~~~~l~~~~~~~~~~ 165 (267)
T d3b8ma1 126 SGYIDYISALVVKES--IENVRNKLEIKTQFEKEKLAQDRIK 165 (267)
T ss_dssp HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468888888776643 7777777778888888777766644
No 6
>d3b8oa1 d.58.60.1 (A:55-319) Lipopolysaccharide biosynthesis protein WzzE {Escherichia coli [TaxId: 562]}
Probab=48.02 E-value=32 Score=22.47 Aligned_cols=44 Identities=7% Similarity=0.165 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy648 16 DWANREYIEIITGSIKKITDFLNSFDMSCRSRLAVLNEKLTTLERRI 62 (72)
Q Consensus 16 DW~nRe~i~~in~~I~~~~~FLN~F~~sc~~kLa~ln~KL~~LE~~L 62 (72)
+|=+ +||.++|.-+.+ +..+.|...-..|+..|..++..+|...
T Consensus 120 ~lL~-~YI~~v~~~~~~--~l~~~l~~~i~~~~~~l~~~~~~~~~~a 163 (265)
T d3b8oa1 120 NLLR-QYVAFASQRAAS--HLNDELKGAWAARTIQMKAQVKRQEEVA 163 (265)
T ss_dssp HHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 899999988877 5688888888888888887777766543
No 7
>d3b8pa1 d.58.60.1 (A:54-292) Chain length determinant protein WzzB {Salmonella typhimurium [TaxId: 90371]}
Probab=44.41 E-value=36 Score=21.95 Aligned_cols=41 Identities=22% Similarity=0.262 Sum_probs=31.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy648 20 REYIEIITGSIKKITDFLNSFDMSCRSRLAVLNEKLTTLERRI 62 (72)
Q Consensus 20 Re~i~~in~~I~~~~~FLN~F~~sc~~kLa~ln~KL~~LE~~L 62 (72)
++||.|||.-+.+ +..+.+...-..|...+..++..+|...
T Consensus 96 ~~YI~fv~~~~~~--~l~~~i~~~i~~~~~~l~~~~~~~~~~a 136 (239)
T d3b8pa1 96 AEYIQQVDEEVAK--ELEVDLKDNITLQTKTLQESLETQEVVA 136 (239)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999988755 5588888888888888888887776653
No 8
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB {Bordetella pertussis [TaxId: 520]}
Probab=43.67 E-value=20 Score=19.51 Aligned_cols=21 Identities=29% Similarity=0.496 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy648 41 DMSCRSRLAVLNEKLTTLERR 61 (72)
Q Consensus 41 ~~sc~~kLa~ln~KL~~LE~~ 61 (72)
...|+.+|...+.|++.|...
T Consensus 43 ~~~C~~~L~~ae~ki~~l~~~ 63 (68)
T d1vp7a_ 43 ARVCQDRLAQAEQQVKVLEGD 63 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcc
Confidence 457888888888877777543
No 9
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=43.00 E-value=24 Score=19.54 Aligned_cols=43 Identities=14% Similarity=0.255 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy648 29 SIKKITDFLNSF----DMSCRSRLAVLNEKLTTLERRIEYLEARKSH 71 (72)
Q Consensus 29 ~I~~~~~FLN~F----~~sc~~kLa~ln~KL~~LE~~L~~LEAklss 71 (72)
.|..|-++|+.- ...++.....+.+++..|+..+..|+..+++
T Consensus 61 sl~eI~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~l~~~l~~ 107 (109)
T d1r8da_ 61 RLDEIKEMLDHPNFDRKAALQSQKEILMKKKQRMDEMIQTIDRTLLS 107 (109)
T ss_dssp CHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444555432 2345666777888888888888888877753
No 10
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=40.48 E-value=27 Score=19.37 Aligned_cols=17 Identities=18% Similarity=0.409 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy648 45 RSRLAVLNEKLTTLERR 61 (72)
Q Consensus 45 ~~kLa~ln~KL~~LE~~ 61 (72)
..||+.+++|+..|.+-
T Consensus 45 ~~kl~~i~~kI~~L~~l 61 (94)
T d1q08a_ 45 QERLQEVEARIAELQSM 61 (94)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34555555554444433
No 11
>d2rfra1 d.17.4.28 (A:1-153) Uncharacterized protein Saro3722 {Novosphingobium aromaticivorans [TaxId: 48935]}
Probab=35.65 E-value=18 Score=20.40 Aligned_cols=19 Identities=42% Similarity=0.438 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy648 48 LAVLNEKLTTLERRIEYLE 66 (72)
Q Consensus 48 La~ln~KL~~LE~~L~~LE 66 (72)
++.|..||+.||.+.+|.+
T Consensus 4 ~~~l~~rl~~led~~aI~~ 22 (153)
T d2rfra1 4 LTNLAARLRLLEDREEIRE 22 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5677788888887777654
No 12
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=35.31 E-value=30 Score=19.62 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy648 46 SRLAVLNEKLTTLERRIEYLEA 67 (72)
Q Consensus 46 ~kLa~ln~KL~~LE~~L~~LEA 67 (72)
.+++.+++++..+.+.+..|+.
T Consensus 86 ~~~~~l~~~i~~l~~~~~~l~~ 107 (127)
T d1q06a_ 86 EKVAEIERHIEELQSMRDQLLA 107 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555544444443
No 13
>d1tqga_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Thermotoga maritima [TaxId: 2336]}
Probab=35.18 E-value=32 Score=18.72 Aligned_cols=28 Identities=29% Similarity=0.452 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy648 34 TDFLNSFDMSCRSRLAVLNEKLTTLERR 61 (72)
Q Consensus 34 ~~FLN~F~~sc~~kLa~ln~KL~~LE~~ 61 (72)
.+||.-|-.-+++.|..++.-|..+|+.
T Consensus 4 ~E~l~~Fl~Ea~e~l~~l~~~l~~le~~ 31 (105)
T d1tqga_ 4 MEYLGVFVDETKEYLQNLNDTLLELEKN 31 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4688888888888888888888777764
No 14
>d1eqfa1 a.29.2.1 (A:1359-1497) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.77 E-value=46 Score=19.47 Aligned_cols=24 Identities=33% Similarity=0.463 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy648 39 SFDMSCRSRLAVLNEKLTTLERRI 62 (72)
Q Consensus 39 ~F~~sc~~kLa~ln~KL~~LE~~L 62 (72)
.+...|+.++..+..+|..+|+.+
T Consensus 114 ~L~~~~~~~~~~~~~~~~~~e~~i 137 (139)
T d1eqfa1 114 SMLDLCDEKLKEKEDKLARLEKAI 137 (139)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344567888888888888888765
No 15
>d1ydxa2 d.287.1.2 (A:194-374) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=29.92 E-value=44 Score=18.76 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy648 31 KKITDFLNSFDMSCRSRLAVLNEKLTTLERR 61 (72)
Q Consensus 31 ~~~~~FLN~F~~sc~~kLa~ln~KL~~LE~~ 61 (72)
++++++|..++ .+++.++.+++.|+.-
T Consensus 142 ~~I~~~l~~~d----~~i~~~~~~i~~l~~l 168 (181)
T d1ydxa2 142 RKAGKIVFLLD----QKLDQYKKELSSLTVI 168 (181)
T ss_dssp HHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 35666666554 3445555555555544
No 16
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=27.33 E-value=44 Score=18.62 Aligned_cols=26 Identities=31% Similarity=0.273 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy648 45 RSRLAVLNEKLTTLERRIEYLEARKS 70 (72)
Q Consensus 45 ~~kLa~ln~KL~~LE~~L~~LEAkls 70 (72)
..+...+..++..+|..+.-+|.++.
T Consensus 70 ~~~~k~lk~~i~~le~~~~~~~~~l~ 95 (110)
T d1seta1 70 IARGKALGEEAKRLEEALREKEARLE 95 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777788888888888777653
No 17
>d1gnwa1 a.45.1.1 (A:86-211) Class phi GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.32 E-value=41 Score=18.91 Aligned_cols=23 Identities=30% Similarity=0.410 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q psy648 49 AVLNEKLTTLERRIEYLEARKSH 71 (72)
Q Consensus 49 a~ln~KL~~LE~~L~~LEAklss 71 (72)
+..+.-+..+++.+.+||+.|+.
T Consensus 49 ~~v~~~~~~l~~~l~~le~~L~~ 71 (126)
T d1gnwa1 49 AVVAEEEAKLAKVLDVYEARLKE 71 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc
Confidence 34455567777888888888765
No 18
>d1hs7a_ a.47.2.1 (A:) Vam3p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.14 E-value=42 Score=19.82 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Q psy648 47 RLAVLNEKLTTLERRIEYLEARKSH 71 (72)
Q Consensus 47 kLa~ln~KL~~LE~~L~~LEAklss 71 (72)
+-..++..|..||.++..||-++.+
T Consensus 4 ~~~ev~~ll~tL~~~i~lLkk~~~k 28 (97)
T d1hs7a_ 4 KTKELSNLIETFAEQSRVLEKECTK 28 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777788888888888776653
No 19
>d1aw9a1 a.45.1.1 (A:83-217) Class phi GST {Maize (Zea mays), type III [TaxId: 4577]}
Probab=26.01 E-value=35 Score=18.90 Aligned_cols=22 Identities=18% Similarity=0.353 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q psy648 50 VLNEKLTTLERRIEYLEARKSH 71 (72)
Q Consensus 50 ~ln~KL~~LE~~L~~LEAklss 71 (72)
.+++....+.+.+.+||..|+.
T Consensus 50 ~~~~~~~~l~~~l~~le~~L~~ 71 (135)
T d1aw9a1 50 VVDKHAEQLAKVLDVYEAHLAR 71 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcc
Confidence 3555667788888999888764
No 20
>d2oy9a1 a.276.1.1 (A:6-90) Uncharacterized protein BH2638 {Bacillus halodurans [TaxId: 86665]}
Probab=25.71 E-value=12 Score=21.85 Aligned_cols=15 Identities=27% Similarity=0.587 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHHHHh
Q psy648 15 QDWANREYIEIITGS 29 (72)
Q Consensus 15 ~DW~nRe~i~~in~~ 29 (72)
-||.+-|++.+++.|
T Consensus 6 ~dWsteEii~V~~F~ 20 (85)
T d2oy9a1 6 LDWSTEEVIDVVHFF 20 (85)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH
Confidence 589999999888754
No 21
>d1m47a_ a.26.1.2 (A:) Interleukin-2 (IL-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.98 E-value=16 Score=22.73 Aligned_cols=32 Identities=28% Similarity=0.458 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhHHH------------------HHHHHHHHHHHHHHHHHH
Q psy648 19 NREYIEIITGSIKK------------------ITDFLNSFDMSCRSRLAV 50 (72)
Q Consensus 19 nRe~i~~in~~I~~------------------~~~FLN~F~~sc~~kLa~ 50 (72)
.+++++.||--+.+ +|+|||+.-.-|.+=+++
T Consensus 77 ~k~~isNinvtvl~LKGset~f~CeydDet~tivEFLn~WItFCQsi~St 126 (128)
T d1m47a_ 77 PRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFCQSIIST 126 (128)
T ss_dssp HHHHHHHHHHHHHHHHC----CCCCBCSSCBCHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHhhhhheeeeccCCccceeeccCceehHHHHHHHHHHHHHHHHHh
Confidence 38899999887764 799999999999886654
No 22
>d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.40 E-value=47 Score=19.11 Aligned_cols=24 Identities=21% Similarity=0.243 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q psy648 45 RSRLAVLNEKLTTLERRIEYLEAR 68 (72)
Q Consensus 45 ~~kLa~ln~KL~~LE~~L~~LEAk 68 (72)
+.=|...|.||+.|=..|.-|+|+
T Consensus 62 ~~eL~~sN~kL~~L~~eL~eLna~ 85 (86)
T d1cxzb_ 62 ELLLRGSSRRLDLLHQQLQELHAH 85 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 334444455555555555555543
No 23
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=23.36 E-value=21 Score=18.76 Aligned_cols=17 Identities=24% Similarity=0.620 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHHhHHH
Q psy648 16 DWANREYIEIITGSIKK 32 (72)
Q Consensus 16 DW~nRe~i~~in~~I~~ 32 (72)
.|.-|+|-.||+...+.
T Consensus 1 ~WnrrdF~~Fi~a~eky 17 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKY 17 (52)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 38899999999987654
No 24
>d1jlwa1 a.45.1.1 (A:91-217) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-4 [TaxId: 123217]}
Probab=23.04 E-value=39 Score=18.59 Aligned_cols=19 Identities=21% Similarity=0.440 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q psy648 53 EKLTTLERRIEYLEARKSH 71 (72)
Q Consensus 53 ~KL~~LE~~L~~LEAklss 71 (72)
+.+..+++.+.+||..|+.
T Consensus 43 ~~~~~~~~~l~~le~~L~~ 61 (127)
T d1jlwa1 43 GRLRSMEQALEFLNTFLEG 61 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 4456677778888887764
No 25
>d2gmya1 a.152.1.3 (A:2-148) Hypothetical protein Atu0492 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=22.96 E-value=64 Score=18.26 Aligned_cols=36 Identities=8% Similarity=0.205 Sum_probs=26.3
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy648 6 REAIQKQIQQDWANREYIEIITGSIKKITDFLNSFDMS 43 (72)
Q Consensus 6 ~~~v~~~iq~DW~nRe~i~~in~~I~~~~~FLN~F~~s 43 (72)
.+.+...+++-|...++++.+- +.-.+++.|+|..+
T Consensus 103 ~d~~~~~l~~~fs~~eivel~~--~i~~~n~~Nr~~~a 138 (147)
T d2gmya1 103 PDDAFETLRAHFSDEEIVKITV--AIGAINTWNRIAVG 138 (147)
T ss_dssp CHHHHHHHHHHSCHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 3567778888899999999773 33467788887643
No 26
>d1yf2a2 d.287.1.2 (A:221-425) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=22.03 E-value=64 Score=17.85 Aligned_cols=25 Identities=28% Similarity=0.480 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy648 32 KITDFLNSFDMSCRSRLAVLNEKLTTLER 60 (72)
Q Consensus 32 ~~~~FLN~F~~sc~~kLa~ln~KL~~LE~ 60 (72)
+|++||...+ .++..++.+++.|+.
T Consensus 163 ~I~~~l~~id----~~i~~~~~~~~~l~~ 187 (205)
T d1yf2a2 163 QIAKILSSVD----KSIELKKQKKEKLQR 187 (205)
T ss_dssp HHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 4555555433 334444444444443
No 27
>d1r5aa1 a.45.1.1 (A:87-215) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]}
Probab=21.74 E-value=41 Score=18.50 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q psy648 52 NEKLTTLERRIEYLEARKSH 71 (72)
Q Consensus 52 n~KL~~LE~~L~~LEAklss 71 (72)
++.++.+++.|.+||..|+.
T Consensus 40 ~~~~~~~~~~l~~le~~L~~ 59 (129)
T d1r5aa1 40 QTKKAKLAEALGWFEAMLKQ 59 (129)
T ss_dssp HHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHcc
Confidence 45677888899999988864
No 28
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=20.28 E-value=55 Score=22.52 Aligned_cols=11 Identities=27% Similarity=0.401 Sum_probs=5.7
Q ss_pred HHHHHHHhhcc
Q psy648 61 RIEYLEARKSH 71 (72)
Q Consensus 61 ~L~~LEAklss 71 (72)
++.-||++++.
T Consensus 30 Rl~ELE~~lsd 40 (362)
T d1gqea_ 30 RLEEVNAELEQ 40 (362)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhcC
Confidence 44555555544
Done!