BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy6481
         (94 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6VMQ6|MCAF1_HUMAN Activating transcription factor 7-interacting protein 1 OS=Homo
            sapiens GN=ATF7IP PE=1 SV=3
          Length = 1270

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
            A ++SY LYAY E  +  V S  WK IG+++ALPLPMACTLTQ V
Sbjct: 1191 ATVDSYHLYAYHEEPSATVPSQ-WKKIGEVKALPLPMACTLTQFV 1234


>sp|Q5ZIE8|MCAF1_CHICK Activating transcription factor 7-interacting protein 1 OS=Gallus
            gallus GN=ATF7IP PE=2 SV=1
          Length = 1085

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
            A+++SY LYAY E+ +  + S  WK IG+++ALPLPMACTLTQ V
Sbjct: 1007 ASVDSYHLYAYHEDPSATMPSQ-WKKIGEVKALPLPMACTLTQFV 1050


>sp|Q7TT18|MCAF1_MOUSE Activating transcription factor 7-interacting protein 1 OS=Mus
            musculus GN=Atf7ip PE=1 SV=1
          Length = 1306

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 2    AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
            A ++SY LYAY E  +  V S  WK IG+++ALPLPMACTLTQ V
Sbjct: 1227 ATVDSYHLYAYHEEPSATVPSQ-WKKIGEVKALPLPMACTLTQFV 1270


>sp|A0JME2|MCAF1_DANRE Activating transcription factor 7-interacting protein 1 OS=Danio
           rerio GN=atf7ip PE=1 SV=2
          Length = 815

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 4/49 (8%)

Query: 2   AAIESYQLYAYQENKNVPVNSS----LWKNIGKLEALPLPMACTLTQIV 46
           AA+++Y LYAY ++    V+ +    LWK IG+++ALPLPMACTLTQ V
Sbjct: 729 AAVDTYHLYAYHQDHQSSVSGASAQMLWKKIGEVKALPLPMACTLTQFV 777


>sp|Q5U623|MCAF2_HUMAN Activating transcription factor 7-interacting protein 2 OS=Homo
           sapiens GN=ATF7IP2 PE=2 SV=2
          Length = 682

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 3/45 (6%)

Query: 2   AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQIV 46
           A +ESY L+   EN N   N  +WK IG+++ALPLPMACTL+Q +
Sbjct: 606 APVESYHLFLCHENSN---NKLIWKKIGEIKALPLPMACTLSQFL 647


>sp|Q3UL97|MCAF2_MOUSE Activating transcription factor 7-interacting protein 2 OS=Mus
           musculus GN=Atf7ip2 PE=2 SV=1
          Length = 452

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 4/43 (9%)

Query: 2   AAIESYQLYAYQENKNVPVNSSLWKNIGKLEALPLPMACTLTQ 44
           A +ESY L+ Y EN +       WK I +++ALPLPMACTL+Q
Sbjct: 377 APVESYHLFLYYENSD----HLTWKKIAEIKALPLPMACTLSQ 415


>sp|Q941L0|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP-forming]
           OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2
          Length = 1065

 Score = 35.8 bits (81), Expect = 0.071,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 6/57 (10%)

Query: 20  VNSSLWKNIGKLEALPLPMACTLTQIVLFCTKLMVPEINVISQI--LLLFERKFAPG 74
           VN++++     + ++PL M CTL  + LF  + ++P+I+ I+ I  L LF   FA G
Sbjct: 839 VNTTIYP----ITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATG 891


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.136    0.409 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,721,176
Number of Sequences: 539616
Number of extensions: 1067402
Number of successful extensions: 2483
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2470
Number of HSP's gapped (non-prelim): 7
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)