BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6490
(398 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VVE5|MSIR6_DROME RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster
GN=Rbp6 PE=2 SV=3
Length = 369
Score = 242 bits (617), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 144/181 (79%), Gaps = 4/181 (2%)
Query: 157 DDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETV 216
+DP K+F+GGLSWQTS E LR+YFG +G +++ ++MKDP T+RSRGFGF+TF++P +V
Sbjct: 26 NDP--GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSV 83
Query: 217 EKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGK 275
+KVL H LDGKK+DPK A P+ PK+ RTKKIFVGG+S T+ E+VK+YF QFG
Sbjct: 84 DKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGP 143
Query: 276 VEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ-AN 334
+E+ +++ D+QT RHRGFGFVTF++E+VVD +CEIHFH I NK VECKKAQPKE + AN
Sbjct: 144 IEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPAN 203
Query: 335 L 335
L
Sbjct: 204 L 204
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%)
Query: 244 KIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEV 303
++ N K+F+GG+S TS E ++ YF ++G + E +++ D T+R RGFGFVTF +
Sbjct: 23 EVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNS 82
Query: 304 VDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
VD + H + KKV+ K A P+ A + K++ +G L
Sbjct: 83 VDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGL 125
>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1
SV=1
Length = 346
Score = 241 bits (614), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 143/188 (76%), Gaps = 3/188 (1%)
Query: 145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
S G SG + + DP K+F+GGLSWQTS + LR+YF FG + + ++M+DP T+RSRG
Sbjct: 6 SPGTSGSANDSQHDP--GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRG 63
Query: 205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSA 263
FGF+TFA+P +V+KVL P H LD K IDPK A P+ +PK+ RTKKIFVGG+S +T
Sbjct: 64 FGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVV 123
Query: 264 EEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECK 323
E+VK YF QFGKVE+ +++ D+ T RHRGFGFVTFENE+VV+ +CEIHFH I NK VECK
Sbjct: 124 EDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECK 183
Query: 324 KAQPKEAV 331
KAQPKE +
Sbjct: 184 KAQPKEVM 191
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
K+F+GG+S TS + ++ YFS+FG++ E +++ D TKR RGFGFVTF + VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 311 HFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
H + +K ++ K A P+ A + K++ +G L
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 117
>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1
SV=1
Length = 328
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 143/188 (76%), Gaps = 3/188 (1%)
Query: 145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
S G SG + + DP K+F+GGLSWQTS + LR+YF FG + + ++M+DP T+RSRG
Sbjct: 6 SQGTSGSANDSQHDP--GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRG 63
Query: 205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSA 263
FGF+TFA+P +V+KVL P H LD K IDPK A P+ +PK+ RTKKIFVGG+S +T
Sbjct: 64 FGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVV 123
Query: 264 EEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECK 323
E+VK YF QFGKVE+ +++ D+ T RHRGFGFVTFENE+VV+ +CEIHFH I NK VECK
Sbjct: 124 EDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECK 183
Query: 324 KAQPKEAV 331
KAQPKE +
Sbjct: 184 KAQPKEVM 191
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
K+F+GG+S TS + ++ YFS+FG++ E +++ D TKR RGFGFVTF + VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 311 HFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
H + +K ++ K A P+ A + K++ +G L
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 117
>sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1
SV=1
Length = 362
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 139/188 (73%), Gaps = 1/188 (0%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
K+F+GGLSWQT+ E LREYFG FG V + L+M+DP+T+RSRGFGF+TF + V+KVL
Sbjct: 20 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA 79
Query: 222 VPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
H LD K IDPK A P+ +PK+ RTKKIFVGG+S +T+ E+VK YF QFGKV++ +
Sbjct: 80 QSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAM 139
Query: 281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
++ D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQPKE + R
Sbjct: 140 LMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGR 199
Query: 341 VILGPLGL 348
+ P G+
Sbjct: 200 SRVMPYGM 207
>sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1
SV=1
Length = 362
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 139/188 (73%), Gaps = 1/188 (0%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
K+F+GGLSWQT+ E LREYFG FG V + L+M+DP+T+RSRGFGF+TF + V+KVL
Sbjct: 20 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA 79
Query: 222 VPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
H LD K IDPK A P+ +PK+ RTKKIFVGG+S +T+ E+VK YF QFGKV++ +
Sbjct: 80 QSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAM 139
Query: 281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
++ D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQPKE + R
Sbjct: 140 LMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGR 199
Query: 341 VILGPLGL 348
+ P G+
Sbjct: 200 SRVMPYGM 207
>sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1
PE=2 SV=1
Length = 362
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 139/188 (73%), Gaps = 1/188 (0%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
K+F+GGLSWQT+ E LREYFG FG V + L+M+DP+T+RSRGFGF+TF + V+KVL
Sbjct: 20 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA 79
Query: 222 VPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
H LD K IDPK A P+ +PK+ RTKKIFVGG+S +T+ E+VK YF QFGKV++ +
Sbjct: 80 QSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAM 139
Query: 281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
++ D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQPKE + R
Sbjct: 140 LMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGR 199
Query: 341 VILGPLGL 348
+ P G+
Sbjct: 200 SRVMPYGM 207
>sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HRP1 PE=1
SV=1
Length = 534
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 122/172 (70%), Gaps = 4/172 (2%)
Query: 161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
S K+F+GGL+W T+ + LREYFG +G VTD+ IMKDP T RSRGFGF++F +P +V++V+
Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
K H LDGK IDPK A P++ ++T KIFVGG+ D +E + +FSQ+G + +
Sbjct: 218 KTQ-HILDGKVIDPKRAIPRDEQ---DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQ 273
Query: 281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
+++D+ T + RGFGFVT+++ + VD +C+ F K++K+E K+A+P+ Q
Sbjct: 274 LMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPRHMQQ 325
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
+++ + + K+F+GG++ DT+ + ++ YF ++G V + ++ D T R RGFGF++FE
Sbjct: 149 RSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208
Query: 300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
VD + + H++ K ++ K+A P++
Sbjct: 209 KPSSVDEVVKTQ-HILDGKVIDPKRAIPRD 237
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 131 VVREAHQLVLVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTD 190
VV+ H +++GK D R+ P + + K+FVGG+ ++ E+F +G + D
Sbjct: 216 VVKTQH---ILDGKVI-DPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIID 271
Query: 191 VLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
+M D T +SRGFGF+T+ + V++V + +KI+ K A P+
Sbjct: 272 AQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1
Length = 360
Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 117/185 (63%), Gaps = 16/185 (8%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
KLFVGGL W T+ E LR YF +G V D +IMKD T +SRGFGF+ F +P V VL
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 222 VPIHTLDGKKIDPKHATP------KNRPKIG----------NRTKKIFVGGVSQDTSAEE 265
HTLDG+ IDPK TP ++RP+ G +R+ KIFVGG+ + E
Sbjct: 70 SRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETE 129
Query: 266 VKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKA 325
+K YF++FG V E VM+ D + +R RGFGF+TFE+E+ VD +HFH I KKVE K+A
Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA 189
Query: 326 QPKEA 330
+P+++
Sbjct: 190 EPRDS 194
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%)
Query: 154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
P ++ S K+FVGG+ +L+EYF FG VT+V+++ D QR RGFGFITF +
Sbjct: 106 PRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDE 165
Query: 214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
++V++ + + H + GKK++ K A P++
Sbjct: 166 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 193
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%)
Query: 246 GNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVD 305
G+ K+FVGG+ T+ E +++YFSQ+G+V + V++ D+ T + RGFGFV F++ V
Sbjct: 6 GDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVG 65
Query: 306 HICEIHFHMIKNKKVECKKAQPK 328
+ H + + ++ K P+
Sbjct: 66 TVLASRPHTLDGRNIDPKPCTPR 88
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2
Length = 406
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 115/184 (62%), Gaps = 15/184 (8%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
KLFVGGL W T+ E LR YF +G V D +IMKD T +SRGFGF+ F +P V VL
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 222 VPIHTLDGKKIDPKHATP------KNRPKIG---------NRTKKIFVGGVSQDTSAEEV 266
HTLDG+ IDPK TP + RPK G +++ KIFVGG+ + E+
Sbjct: 70 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 129
Query: 267 KAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQ 326
+ YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD +HFH I KKVE K+A+
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 327 PKEA 330
P+++
Sbjct: 190 PRDS 193
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
P D S K+FVGG+ +LREYF FG VT+V+++ D QR RGFGFITF +
Sbjct: 105 PRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 164
Query: 214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
++V++ + + H + GKK++ K A P++
Sbjct: 165 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 192
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1
Length = 407
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 115/184 (62%), Gaps = 15/184 (8%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
KLFVGGL W T+ E LR YF +G V D +IMKD T +SRGFGF+ F +P V VL
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 222 VPIHTLDGKKIDPKHATP------KNRPKIG---------NRTKKIFVGGVSQDTSAEEV 266
HTLDG+ IDPK TP + RPK G +++ KIFVGG+ + E+
Sbjct: 70 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 129
Query: 267 KAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQ 326
+ YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD +HFH I KKVE K+A+
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 327 PKEA 330
P+++
Sbjct: 190 PRDS 193
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
P D+ S K+FVGG+ +LREYF FG VT+V+++ D QR RGFGFITF +
Sbjct: 105 PRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 164
Query: 214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
++V++ + + H + GKK++ K A P++
Sbjct: 165 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 192
>sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila
melanogaster GN=Hrb27C PE=1 SV=2
Length = 421
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 115/171 (67%), Gaps = 3/171 (1%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
KLFVGGLSW+T+ E L YF FG + D ++MK+ + RSRGFGF+TFA+P V VL+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 222 VPIHTLDGKKIDPKHATPKN--RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
HTLDG+ IDPK P+ +PK G K+F+GG+ + + +++ +F+++GKV E
Sbjct: 67 NGPHTLDGRTIDPKPCNPRTLQKPKKGG-GYKVFLGGLPSNVTETDLRTFFNRYGKVTEV 125
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEA 330
V++ DQ+ K+ RGFGF++FE E V+H+ + + K+VE KKA+P++
Sbjct: 126 VIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDG 176
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%)
Query: 251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
K+FVGG+S +T+ E + YF +FG + + V++ + ++ R RGFGFVTF + V+H+ +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 311 HFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
H + + ++ K P+ + G +V LG L
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGL 103
>sp|Q3SWU3|HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus
GN=Hnrpdl PE=2 SV=1
Length = 322
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 111/178 (62%), Gaps = 10/178 (5%)
Query: 159 PTSA-KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVE 217
PTS K+F+GGLSW TS + L EY FG V D I DP+T RSRGFGF+ F + +V+
Sbjct: 47 PTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 106
Query: 218 KVLKVPIHTLDGKKIDPKHATP---KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFG 274
KVL++ H LDGK IDPK A K P KK+FVGG+S DTS E++K YF FG
Sbjct: 107 KVLELKEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFG 160
Query: 275 KVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
++E + MD +T RGF F+T+ +EE V + E +H I + K E K AQPKE +
Sbjct: 161 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKEVYR 218
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 239 PKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTF 298
P + P GN K+F+GG+S DTS +++ Y S+FG+V + + D T R RGFGFV F
Sbjct: 43 PSSFPTSGN---KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 99
Query: 299 ENEEVVDHICEIHFHMIKNKKVECKKAQ 326
++ VD + E+ H + K ++ K+A+
Sbjct: 100 KDAASVDKVLELKEHKLDGKLIDPKRAK 127
>sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC660.15 PE=4 SV=1
Length = 474
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 112/171 (65%), Gaps = 4/171 (2%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
K+F+GGL+W+T+ + LR+YF FG V D +M+D T RSRGFGF+TF P+ V +V+
Sbjct: 163 GKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMS 222
Query: 222 VPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
H LDGK IDPK A P+ + +T K+FVGGV D + EE + +F+QFG+V + +
Sbjct: 223 KE-HHLDGKIIDPKRAIPREEQE---KTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATL 278
Query: 282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
+MD+ T R RGFGFVT+ENE V+ + I K VE K+A PK +++
Sbjct: 279 MMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPKASLR 329
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%)
Query: 148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
D R+ P + +AK+FVGG+ + E+ R +F FG V D +M D T R RGFGF
Sbjct: 233 DPKRAIPREEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGF 292
Query: 208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
+T+ VE + P T+ GK ++ K ATPK
Sbjct: 293 VTYENESAVEATMSQPYITIHGKPVEVKRATPK 325
>sp|O14979|HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like OS=Homo sapiens
GN=HNRPDL PE=1 SV=3
Length = 420
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
K+F+GGLSW TS + L EY FG V D I DP+T RSRGFGF+ F + +V+KVL+
Sbjct: 148 GKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLE 207
Query: 222 VPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
+ H LDGK IDPK A K KK+FVGG+S DTS E++K YF FG++E +
Sbjct: 208 LKEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIEL 264
Query: 282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
MD +T RGF F+T+ +EE V + E +H I + K E K AQPKE +
Sbjct: 265 PMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKEVYR 315
>sp|Q5ZI72|HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like OS=Gallus gallus
GN=HNRPDL PE=2 SV=1
Length = 301
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 108/174 (62%), Gaps = 9/174 (5%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
K+F+GGLSW TS + L EY FG V D I DP+T RSRGFGF+ F + +VEKVL+
Sbjct: 30 GKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLE 89
Query: 222 VPIHTLDGKKIDPKHATP---KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEE 278
+ H LDGK IDPK A K P KK+FVGG+S DTS E++K YF FG++E
Sbjct: 90 LKEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFGEIEN 143
Query: 279 TVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
+ MD +T RGF F+T+ +EE V + E +H I + K E K AQPKE +
Sbjct: 144 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKEVYR 197
>sp|Q9Z130|HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like OS=Mus musculus
GN=Hnrpdl PE=1 SV=1
Length = 301
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 108/175 (61%), Gaps = 9/175 (5%)
Query: 161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
K+F+GGLSW TS + L EY FG V D I DP+T RSRGFGF+ F + +V+KVL
Sbjct: 28 DGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVL 87
Query: 221 KVPIHTLDGKKIDPKHATP---KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVE 277
++ H LDGK IDPK A K P KK+FVGG+S DTS E++K YF FG++E
Sbjct: 88 ELKEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFGEIE 141
Query: 278 ETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
+ MD +T RGF F+T+ +EE V + E +H I + K E K AQPKE +
Sbjct: 142 NIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKEVYR 196
>sp|Q6NU14|HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B OS=Xenopus laevis
GN=hnrpdl-b PE=2 SV=1
Length = 291
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
+K+F+GGLSW TS + L EY FG V D I DP+T RSRGFGF+ F + +V+KVL+
Sbjct: 34 SKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLE 93
Query: 222 VPIHTLDGKKIDPKHATP---KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEE 278
H LDGK IDPK A K P KK+FVGG+S +T+ E++K YF FG++E
Sbjct: 94 TKEHKLDGKLIDPKRAKALQGKEPP------KKVFVGGLSPETTEEQIKQYFGGFGEIEN 147
Query: 279 TVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAV 331
+ MD +T RGF FVT+ +EE V + E FH I K E K AQPKE
Sbjct: 148 IELPMDTKTNERRGFCFVTYTDEEPVQKLLESRFHQIGTGKCEIKAAQPKEVY 200
>sp|Q640A2|HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like OS=Xenopus
tropicalis GN=hnrpdl PE=2 SV=1
Length = 297
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
K+F+GGLSW TS + L EY FG V D I DP+T RSRGFGF+ F + +V+KVL+
Sbjct: 26 GKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLE 85
Query: 222 VPIHTLDGKKIDPKHATP---KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEE 278
H LDGK IDPK A K P KK+FVGG+S +T+ E++K YF FG++E
Sbjct: 86 TKEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPETTEEQIKQYFGGFGEIEN 139
Query: 279 TVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAV 331
+ MD +T RGF FVT+ EE V + E FH I K E K AQPKE
Sbjct: 140 IELPMDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKVAQPKEVY 192
>sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus
GN=Hnrnpab PE=1 SV=1
Length = 285
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 114/188 (60%), Gaps = 6/188 (3%)
Query: 145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
+ GD ++ +D + K+FVGGLSW TS + L++YF FG V D I DP T RSRG
Sbjct: 60 AEGDQINASKNEED--AGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117
Query: 205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAE 264
FGFI F + +VEKVL H LDG+ IDPK A + + KKIFVGG++ + + E
Sbjct: 118 FGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEE 173
Query: 265 EVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKK 324
+++ YF QFG++E + +D + + RGF F+TF+ E+ V + E FH + K E K
Sbjct: 174 KIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKV 233
Query: 325 AQPKEAVQ 332
AQPKE Q
Sbjct: 234 AQPKEVYQ 241
>sp|Q8W034|RNP1_ARATH Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana
GN=RNP1 PE=1 SV=1
Length = 411
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 116/190 (61%), Gaps = 18/190 (9%)
Query: 158 DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVE 217
D KLFVGG+SW+T +KLRE+F +G V+ ++M+D +T R RGFGF+ F++P ++
Sbjct: 2 DSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLD 61
Query: 218 KVLKVPIHTLDGKKIDPKHATPKNRPKIG-----------------NRTKKIFVGGVSQD 260
+VL+ H++D +++D K A + ++ N+TKKIFVGG+
Sbjct: 62 RVLQEK-HSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120
Query: 261 TSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKV 320
+ EE + YF +G V + ++ DQ T R RGFGFV+F++E+ VD + FH + K+V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180
Query: 321 ECKKAQPKEA 330
E K+A PK+A
Sbjct: 181 EVKRALPKDA 190
>sp|Q7ZX83|HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A OS=Xenopus laevis
GN=hnrpdl-a PE=2 SV=1
Length = 293
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
K+F+GGLSW TS + L EY FG V D I DP+T RSRGFGF+ F + +V+KVL+
Sbjct: 26 GKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLE 85
Query: 222 VPIHTLDGKKIDPKHATP---KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEE 278
H LDGK IDPK A K P KK+FVGG+S +T+ E++K YF FG++E
Sbjct: 86 TNEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPETTEEQIKQYFGGFGEIEN 139
Query: 279 TVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAV 331
+ +D +T RGF FVT+ EE V + E FH I K E K AQPKE
Sbjct: 140 IELPIDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKAAQPKEVY 192
>sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B OS=Homo sapiens
GN=HNRNPAB PE=1 SV=2
Length = 332
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Query: 157 DDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETV 216
++ + K+FVGGLSW TS + L++YF FG V D I DP T RSRGFGFI F + +V
Sbjct: 64 NEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASV 123
Query: 217 EKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEE-VKAYFSQFGK 275
EKVL H LDG+ IDPK A + + KKIFVGG++ ++ EE ++ YF +FG+
Sbjct: 124 EKVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPESPTEEKIREYFGEFGE 179
Query: 276 VEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
+E + MD + + RGF F+TF+ EE V + E FH + K E K AQPKE Q
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQ 236
>sp|Q60668|HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus
GN=Hnrnpd PE=1 SV=2
Length = 355
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
K+F+GGLSW T+ + L++YF FG V D + DPIT RSRGFGF+ F E E+V+KV+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
H L+GK IDPK A K KKIFVGG+S DT E+++ YF FG+VE +
Sbjct: 158 KEHKLNGKVIDPKRAKA---MKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELP 214
Query: 283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
MD +T + RGF F+TF+ EE V I E +H + K E K A KE
Sbjct: 215 MDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>sp|Q14103|HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens
GN=HNRNPD PE=1 SV=1
Length = 355
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
K+F+GGLSW T+ + L++YF FG V D + DPIT RSRGFGF+ F E E+V+KV+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
H L+GK IDPK A K KKIFVGG+S DT E+++ YF FG+VE +
Sbjct: 158 KEHKLNGKVIDPKRAKA---MKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELP 214
Query: 283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
MD +T + RGF F+TF+ EE V I E +H + K E K A KE
Sbjct: 215 MDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>sp|P21522|ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
OS=Schistocerca americana GN=HNRNP PE=2 SV=1
Length = 342
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 114/181 (62%), Gaps = 3/181 (1%)
Query: 151 RSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITF 210
R G+ KLF+GGL ++T+ E L+++F +G + DV++MKDP T+RSRGFGFIT+
Sbjct: 6 RENDHGEPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITY 65
Query: 211 AEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVK 267
+ V+ H +DG+ ++PK A P+ RP+ G KK+FVGG+ ++ +++
Sbjct: 66 SRAHMVDDAQNARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLR 125
Query: 268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
YF Q+G V +++D++T++ RGF FV F++ + VD IC H I+ K ++ KKA P
Sbjct: 126 DYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQIRGKHIDVKKALP 185
Query: 328 K 328
K
Sbjct: 186 K 186
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 249 TKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHIC 308
+K+F+GG+ T+ E +K +F Q+G++ + V++ D +TKR RGFGF+T+ +VD
Sbjct: 16 VRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Query: 309 EIHFHMIKNKKVECKKAQPKEAV 331
H + + VE K+A P+ +
Sbjct: 76 NARPHKVDGRVVEPKRAVPRTEI 98
>sp|Q9JJ54|HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus
GN=Hnrnpd PE=1 SV=1
Length = 353
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
K+F+GGLSW T+ + L++YF FG V D + DPIT RSRGFGF+ F E E+V+KV+
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
H L+GK IDPK A K KKIFVGG+S DT E+++ YF FG+VE +
Sbjct: 156 KEHKLNGKVIDPKRAKA---MKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELP 212
Query: 283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
MD +T + RGF F+TF+ EE V I E +H + K E K A KE
Sbjct: 213 MDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 259
>sp|Q32P51|RA1L2_HUMAN Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens
GN=HNRNPA1L2 PE=2 SV=2
Length = 320
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 111/174 (63%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR +F +G +TD ++M+DP T+RSRGFGF+T+A E V+ +
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNT 74
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + RP KKIFVGG+ +DT ++ YF Q+GK+E
Sbjct: 75 TPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+ + + RGF FVTF++ + VD I +H +K E +KA PK+ + +
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKALPKQEMAS 188
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 8/115 (6%)
Query: 235 KHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFG 294
K A+PK ++ +K+F+GG+S +T+ E ++++F Q+G + + V++ D TKR RGFG
Sbjct: 3 KSASPKEPEQL----RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFG 58
Query: 295 FVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
FVT+ E VD H + + VE K+A +E Q A+L V K++ +G +
Sbjct: 59 FVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVGGI 112
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T K+FVGG+ T LR+YF +G + + IM D + + RGF F+TF + ++V+K+
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT+ G + + A PK
Sbjct: 163 VIQKYHTVKGHNCEVRKALPK 183
>sp|P51990|RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xenopus
laevis PE=2 SV=1
Length = 358
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR ++ +G +TD ++M+DP ++RSRGFGF+TF+ V+ +
Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
HT+DG+ ++PK A + +P KK+FVGG+ +DT ++ YF ++GK+E T
Sbjct: 70 RPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIEST 129
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
++ D+Q+ + RGFGFVTF + + VD I +H I E +KA K+ +Q
Sbjct: 130 EIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKALSKQEMQ 182
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T KLFVGG+ T LREYF +G + I+ D + + RGFGF+TF + + V+K+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKI 157
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A K
Sbjct: 158 VLQKYHTINGHNAEVRKALSK 178
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+S +T+ E ++ ++ Q+G++ + V++ D +KR RGFGFVTF VD
Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS 68
Query: 310 IHFHMIKNKKVECKKAQPKE 329
H I + VE K+A +E
Sbjct: 69 ARPHTIDGRVVEPKRAVARE 88
>sp|Q9TTV2|ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Saguinus oedipus
GN=HNRNPA2B1 PE=1 SV=1
Length = 341
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 112/173 (64%), Gaps = 3/173 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS+QT+ E LR Y+ +G +TD ++M+DP ++RSRGFGF+TF+ V+ +
Sbjct: 10 KLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H++DG+ ++PK A + +P KK+FVGG+ +DT ++ YF+++GK++
Sbjct: 70 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTI 129
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
++ D+Q+ + RGFGFVTF++ + VD I +H I E +KA ++ +Q
Sbjct: 130 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 182
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+S T+ E ++ Y+ Q+GK+ + V++ D +KR RGFGFVTF + VD
Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 310 IHFHMIKNKKVECKKAQPKE 329
H I + VE K+A +E
Sbjct: 69 ARPHSIDGRVVEPKRAVARE 88
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T KLFVGG+ T LR+YF +G + + I+ D + + RGFGF+TF + + V+K+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A +
Sbjct: 158 VLQKYHTINGHNAEVRKALSR 178
>sp|P17130|ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog OS=Xenopus
laevis GN=hnrnpa1 PE=2 SV=1
Length = 365
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 112/174 (64%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LRE+F +G +TD ++M+DP ++RSRGFGF+T+ + V+ +
Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA 74
Query: 223 PIHTLDGKKIDPKHATPK---NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + +RP KKIFVGG+ +DT + ++ YF Q+GK+E
Sbjct: 75 RPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVI 134
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+ + + RGF FVTFE+ + VD I +H + N + +KA K+ + +
Sbjct: 135 EIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQEMAS 188
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+S +T+ E ++ +F Q+G + + V++ D +KR RGFGFVT+ + + VD
Sbjct: 14 RKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMT 73
Query: 310 IHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
H + + VE K+A +E A+L V K++ +G +
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSSRPGAHLTV-KKIFVGGI 112
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T K+FVGG+ T + LREYF +G + + IM D + + RGF F+TF + ++V+K+
Sbjct: 103 TVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++ + A K
Sbjct: 163 VIQKYHTVNNHNSQVRKALSK 183
>sp|Q22037|ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis
elegans GN=hrp-1 PE=1 SV=1
Length = 346
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 113/172 (65%), Gaps = 3/172 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
K+FVGGL+ T+ + +RE++ FG +TD+++M+DP T+RSRGFGF+TF+ V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 223 PIHTLDGKKIDPKHATP---KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DGK +DPK A P KNR + TK+++V GV +D + + + YF+++G V ++
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAV 331
+++D+ T++ RGFGFVTF++ + VD HM+ + + +K K+ +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEM 195
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+KIFVGG++ +T+ + ++ ++SQFG++ + +++ D TKR RGFGFVTF + VD +
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 310 IHFHMIKNKKVECKKAQPKE 329
H+I K V+ K+A P++
Sbjct: 83 QRPHIIDGKTVDPKRAVPRD 102
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 140 LVNGKSSGDSGRSTPTGD------DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLI 193
+++GK+ D R+ P D + ++ +L+V G+ + + L EYF +G VT I
Sbjct: 87 IIDGKTV-DPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 194 MKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN 241
+ D TQ+ RGFGF+TF + ++V++ + H ++G + D + K+
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKD 193
>sp|Q6URK4|ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus
GN=Hnrnpa3 PE=1 SV=1
Length = 379
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 112/174 (64%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ + LRE+F +G +TD ++M+DP T+RSRGFGF+T++ E V+ +
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + +P KKIFVGG+ +DT ++ YF ++GK+E
Sbjct: 96 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+Q+ + RGF FVTF++ + VD I +H I E KKA K+ +Q+
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQS 209
>sp|Q8BG05|ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus
GN=Hnrnpa3 PE=1 SV=1
Length = 379
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 112/174 (64%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ + LRE+F +G +TD ++M+DP T+RSRGFGF+T++ E V+ +
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + +P KKIFVGG+ +DT ++ YF ++GK+E
Sbjct: 96 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+Q+ + RGF FVTF++ + VD I +H I E KKA K+ +Q+
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQS 209
>sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens
GN=HNRNPA3 PE=1 SV=2
Length = 378
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 112/174 (64%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ + LRE+F +G +TD ++M+DP T+RSRGFGF+T++ E V+ +
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + +P KKIFVGG+ +DT ++ YF ++GK+E
Sbjct: 96 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+Q+ + RGF FVTF++ + VD I +H I E KKA K+ +Q+
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQS 209
>sp|P51992|RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus
laevis PE=2 SV=1
Length = 385
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 110/174 (63%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ + LRE+F +G +TD ++M+DP T+RSRGFGF+T++ E V+ +
Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + RP KKIFVGG+ +DT ++ YF +GK+E
Sbjct: 88 RPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETI 147
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+Q+ + RGF FVTF++ + VD I +H I E KKA K+ +Q
Sbjct: 148 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCEVKKALSKQEMQT 201
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 241 NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEN 300
+ PK + +K+F+GG+S +T+ + ++ +F Q+GK+ + V++ D QTKR RGFGFVT+
Sbjct: 18 HEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSC 77
Query: 301 EEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
E VD H + + VE K+A +E A+L V K++ +G +
Sbjct: 78 VEEVDASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTV-KKIFVGGI 125
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T K+FVGG+ T LR+YF +G + + +M+D + + RGF F+TF + +TV+K+
Sbjct: 116 TVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++ + K A K
Sbjct: 176 VVQKYHTINLHNCEVKKALSK 196
>sp|Q2HJ60|ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus
GN=HNRNPA2B1 PE=2 SV=1
Length = 341
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR Y+ +G +TD ++M+DP ++RSRGFGF+TF+ V+ +
Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H++DG+ ++PK A + +P KK+FVGG+ +DT ++ YF ++GK++
Sbjct: 70 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 129
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
++ D+Q+ + RGFGFVTF++ + VD I +H I E +KA ++ +Q
Sbjct: 130 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 182
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D +KR RGFGFVTF + VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 310 IHFHMIKNKKVECKKAQPKE 329
H I + VE K+A +E
Sbjct: 69 ARPHSIDGRVVEPKRAVARE 88
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T KLFVGG+ T LR+YF +G + + I+ D + + RGFGF+TF + + V+K+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A +
Sbjct: 158 VLQKYHTINGHNAEVRKALSR 178
>sp|O88569|ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus
GN=Hnrnpa2b1 PE=1 SV=2
Length = 353
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR Y+ +G +TD ++M+DP ++RSRGFGF+TF+ V+ +
Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H++DG+ ++PK A + +P KK+FVGG+ +DT ++ YF ++GK++
Sbjct: 82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
++ D+Q+ + RGFGFVTF++ + VD I +H I E +KA ++ +Q
Sbjct: 142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D +KR RGFGFVTF + VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 310 IHFHMIKNKKVECKKAQPKE 329
H I + VE K+A +E
Sbjct: 81 ARPHSIDGRVVEPKRAVARE 100
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T KLFVGG+ T LR+YF +G + + I+ D + + RGFGF+TF + + V+K+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A +
Sbjct: 170 VLQKYHTINGHNAEVRKALSR 190
>sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens
GN=HNRNPA2B1 PE=1 SV=2
Length = 353
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR Y+ +G +TD ++M+DP ++RSRGFGF+TF+ V+ +
Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H++DG+ ++PK A + +P KK+FVGG+ +DT ++ YF ++GK++
Sbjct: 82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
++ D+Q+ + RGFGFVTF++ + VD I +H I E +KA ++ +Q
Sbjct: 142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D +KR RGFGFVTF + VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 310 IHFHMIKNKKVECKKAQPKE 329
H I + VE K+A +E
Sbjct: 81 ARPHSIDGRVVEPKRAVARE 100
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T KLFVGG+ T LR+YF +G + + I+ D + + RGFGF+TF + + V+K+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A +
Sbjct: 170 VLQKYHTINGHNAEVRKALSR 190
>sp|Q08473|SQD_DROME RNA-binding protein squid OS=Drosophila melanogaster GN=sqd PE=1
SV=3
Length = 344
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 11/188 (5%)
Query: 141 VNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQ 200
NG S S S DD KLFVGGLSW+T+ ++LR++FG +G + + + DP T
Sbjct: 38 TNGSSDNQSAASGQRDDD---RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTG 94
Query: 201 RSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQD 260
RSRGF FI F E ++KV H ++ KK+DPK A R KIFVGG++ +
Sbjct: 95 RSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKA--------RHGKIFVGGLTTE 146
Query: 261 TSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKV 320
S EE+K YF QFG + E M D+Q + +GF F+TF++E+VV + + I K+V
Sbjct: 147 ISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEV 206
Query: 321 ECKKAQPK 328
+ K+A PK
Sbjct: 207 DVKRATPK 214
>sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens
GN=HNRNPA1 PE=1 SV=5
Length = 372
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR +F +G +TD ++M+DP T+RSRGFGF+T+A E V+ +
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + RP KKIFVGG+ +DT ++ YF Q+GK+E
Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+ + + RGF FVTF++ + VD I +H + E +KA K+ + +
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMAS 188
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
PK + +K+F+GG+S +T+ E ++++F Q+G + + V++ D TKR RGFGFVT+ E
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
VD H + + VE K+A +E Q A+L V K++ +G +
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVGGI 112
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T K+FVGG+ T LR+YF +G + + IM D + + RGF F+TF + ++V+K+
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A K
Sbjct: 163 VIQKYHTVNGHNCEVRKALSK 183
>sp|P51989|RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus
laevis PE=2 SV=1
Length = 346
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR Y+ +G +TD ++M+DP ++RSRGFGF+TF+ V+ +
Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
HT+DG+ ++PK A + +P KK+FVGG+ +DT ++ YF ++GK++
Sbjct: 70 RPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIDSI 129
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
++ D+Q+ + RGF FVTF++ + VD I +H I E +KA K+ +Q
Sbjct: 130 EIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEMQ 182
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T KLFVGG+ T LREYF +G + + I+ D + + RGF F+TF + + V+K+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKI 157
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A K
Sbjct: 158 VLQKYHTINGHNAEVRKALSK 178
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+S +T+ E ++ Y+ Q+G + + V++ D +KR RGFGFVTF VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMA 68
Query: 310 IHFHMIKNKKVECKKAQPKE 329
H I + VE K+A +E
Sbjct: 69 TRPHTIDGRVVEPKRAVARE 88
>sp|A5A6H4|ROA1_PANTR Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes
GN=HNRNPA1 PE=2 SV=1
Length = 320
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR +F +G +TD ++M+DP T+RSRGFGF+T+A E V+ +
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + RP KKIFVGG+ +DT ++ YF Q+GK+E
Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+ + + RGF FVTF++ + VD I +H + E +KA K+ + +
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMAS 188
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
PK + +K+F+GG+S +T+ E ++++F Q+G + + V++ D TKR RGFGFVT+ E
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
VD H + + VE K+A +E Q A+L V K++ +G +
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVGGI 112
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T K+FVGG+ T LR+YF +G + + IM D + + RGF F+TF + ++V+K+
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A K
Sbjct: 163 VIQKYHTVNGHNCEVRKALSK 183
>sp|P49312|ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus
GN=Hnrnpa1 PE=1 SV=2
Length = 320
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR +F +G +TD ++M+DP T+RSRGFGF+T+A E V+ +
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + RP KKIFVGG+ +DT ++ YF Q+GK+E
Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+ + + RGF FVTF++ + VD I +H + E +KA K+ + +
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMAS 188
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
PK + +K+F+GG+S +T+ E ++++F Q+G + + V++ D TKR RGFGFVT+ E
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
VD H + + VE K+A +E Q A+L V K++ +G +
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVGGI 112
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T K+FVGG+ T LR+YF +G + + IM D + + RGF F+TF + ++V+K+
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A K
Sbjct: 163 VIQKYHTVNGHNCEVRKALSK 183
>sp|P09867|ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 OS=Bos taurus GN=HNRNPA1
PE=1 SV=2
Length = 320
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR +F +G +TD ++M+DP T+RSRGFGF+T+A E V+ +
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + RP KKIFVGG+ +DT ++ YF Q+GK+E
Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+ + + RGF FVTF++ + VD I +H + E +KA K+ + +
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMAS 188
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
PK + +K+F+GG+S +T+ E ++++F Q+G + + V++ D TKR RGFGFVT+ E
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
VD H + + VE K+A +E Q A+L V K++ +G +
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVGGI 112
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T K+FVGG+ T LR+YF +G + + IM D + + RGF F+TF + ++V+K+
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A K
Sbjct: 163 VIQKYHTVNGHNCEVRKALSK 183
>sp|A7VJC2|ROA2_RAT Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus
GN=Hnrnpa2b1 PE=1 SV=1
Length = 353
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR Y+ +G +TD ++M+DP ++RSRGFGF+TF+ V+ +
Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H++DG+ ++PK A + +P KK+FVGG+ +DT ++ YF ++GK++
Sbjct: 82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
++ D+Q+ + RGFGFVTF++ + VD I +H I E +KA ++ +Q
Sbjct: 142 EIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKALSRQEMQ 194
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D +KR RGFGFVTF + VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 310 IHFHMIKNKKVECKKAQPKE 329
H I + VE K+A +E
Sbjct: 81 ARPHSIDGRVVEPKRAVARE 100
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T KLFVGG+ T LR+YF +G + + I+ D + + RGFGF+TF + + V+K+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
HT++G + + A +
Sbjct: 170 FLQKYHTINGHNAEVRKALSR 190
>sp|P51968|RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus
laevis PE=2 SV=1
Length = 373
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 7/189 (3%)
Query: 152 STPTGDDPTS----AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
S G DP KLF+GGLS++T+ + LRE+F +G +TD ++M+DP T+RSRGFGF
Sbjct: 13 SDDQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGF 72
Query: 208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAE 264
+T++ E V+ + H +DG+ ++PK A + RP KKIFVGG+ +DT
Sbjct: 73 VTYSCVEEVDASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEY 132
Query: 265 EVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKK 324
++ Y +GK+E ++ D+Q+ + RGF FVTF++ + VD I +H I E KK
Sbjct: 133 HLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 192
Query: 325 AQPKEAVQA 333
A K+ +Q
Sbjct: 193 ALSKQEMQT 201
>sp|P04256|ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus
GN=Hnrnpa1 PE=1 SV=3
Length = 320
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR +F +G +TD ++M+DP T+RSRGFGF+T+A E V+ +
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + RP KKIFVGG+ +DT ++ YF Q+GK+E
Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+ + + RGF FVTF++ + VD I +H + E +KA K+ + +
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALCKQEMAS 188
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
PK + +K+F+GG+S +T+ E ++++F Q+G + + V++ D TKR RGFGFVT+ E
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
VD H + + VE K+A +E Q A+L V K++ +G +
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVGGI 112
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T K+FVGG+ T LR+YF +G + + IM D + + RGF F+TF + ++V+K+
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A K
Sbjct: 163 VIQKYHTVNGHNCEVRKALCK 183
>sp|Q28521|ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 OS=Macaca mulatta
GN=HNRNPA1 PE=2 SV=3
Length = 320
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 108/174 (62%), Gaps = 3/174 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR +F +G +TD ++M+DP T+RSRGFGF+T+A E V+ +
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNA 74
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A + RP KKIFVGG+ +DT ++ YF Q+GK+E
Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
++ D+ + + RGF FVTF++ VD I +H + E +KA K+ + +
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCEVRKALSKQEMAS 188
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
PK + +K+F+GG+S +T+ E ++++F Q+G + + V++ D TKR RGFGFVT+ E
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
VD H + + VE K+A +E Q A+L V K++ +G +
Sbjct: 67 KVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVGGI 112
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T K+FVGG+ T LR+YF +G + + IM D + + RGF F+TF + +V+K+
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKI 162
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A K
Sbjct: 163 VIQKYHTVNGHNCEVRKALSK 183
>sp|Q5RBU8|ROA2_PONAB Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Pongo abelii
GN=HNRNPA2B1 PE=2 SV=1
Length = 353
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGLS++T+ E LR Y+ +G +TD ++M+DP ++RSRGFGF+TF+ V+ +
Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81
Query: 223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H++DG+ ++PK A + +P KK+FVGG+ +DT ++ YF ++GK++
Sbjct: 82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
++ D+Q+ + RGFGFVTF++ + VD I H I E +KA ++ +Q
Sbjct: 142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKALSRQEMQ 194
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D +KR RGFGFVTF + VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 310 IHFHMIKNKKVECKKAQPKE 329
H I + VE K+A +E
Sbjct: 81 ARPHSIDGRVVEPKRAVARE 100
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T KLFVGG+ T LR+YF +G + + I+ D + + RGFGF+TF + + V+K+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ HT++G + + A +
Sbjct: 170 VLQKHHTINGHNAEVRKALSR 190
>sp|P07909|ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila
melanogaster GN=Hrb98DE PE=2 SV=1
Length = 365
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
Query: 163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
KLF+GGL ++T+ E L+ +F +G + DV++MKDP T+RSRGFGFIT++ +++ K
Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91
Query: 223 PIHTLDGKKIDPKHATPK---NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
H +DG+ ++PK A P+ + P G KK+FVG + D + ++ YF FG + +
Sbjct: 92 RPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDI 151
Query: 280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
+++D++T + RGF FV F++ + VD + H + K V+ KKA PK+ Q
Sbjct: 152 NIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQ 204
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 55/84 (65%)
Query: 250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
+K+F+GG+ T+ E +KA+F ++G + + V++ D +TKR RGFGF+T+ + ++D +
Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 90
Query: 310 IHFHMIKNKKVECKKAQPKEAVQA 333
H I + VE K+A P++ + +
Sbjct: 91 SRPHKIDGRVVEPKRAVPRQDIDS 114
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%)
Query: 160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
T KLFVG L + +R+YF FG + D+ I+ D T + RGF F+ F + + V+KV
Sbjct: 120 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 179
Query: 220 LKVPIHTLDGKKIDPKHATPK 240
+ H L+GK +D K A PK
Sbjct: 180 VLQKQHQLNGKMVDVKKALPK 200
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,003,448
Number of Sequences: 539616
Number of extensions: 7631603
Number of successful extensions: 56461
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 786
Number of HSP's that attempted gapping in prelim test: 38597
Number of HSP's gapped (non-prelim): 12493
length of query: 398
length of database: 191,569,459
effective HSP length: 120
effective length of query: 278
effective length of database: 126,815,539
effective search space: 35254719842
effective search space used: 35254719842
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)