AmiGO: BLAST Results


BLAST match view associations BLAST with msi msi msi musashi	protein from Drosophila melanogaster	3.6e-89
BLAST match view associations BLAST with MSI2 MSI2 MSI2 RNA-binding protein Musashi homolog 2	protein from Homo sapiens	1.0e-59
BLAST match view associations BLAST with Msi2 Msi2 Msi2 musashi RNA-binding protein 2	protein from Mus musculus	1.3e-59
BLAST match view associations BLAST with Rbp6 Rbp6 Rbp6 RNA-binding protein 6	protein from Drosophila melanogaster	2.7e-59
BLAST match view associations BLAST with msi2b msi2b msi2b musashi homolog 2b (Drosophila)	gene_product from Danio rerio	8.4e-58
BLAST match view associations BLAST with MSI2 MSI2 MSI2 cDNA FLJ56904, highly similar to RNA-binding protein Musashi homolog 2	protein from Homo sapiens	5.9e-57
BLAST match view associations BLAST with msi2a msi2a msi2a musashi homolog 2a (Drosophila)	gene_product from Danio rerio	5.9e-57
BLAST match view associations BLAST with MSI1 MSI1 MSI1 RNA-binding protein Musashi homolog 1	protein from Homo sapiens	2.0e-56
BLAST match view associations BLAST with Msi1 Msi1 Msi1 musashi RNA-binding protein 1	protein from Mus musculus	2.5e-56
BLAST match view associations BLAST with Msi1 Msi1 Msi1 musashi RNA-binding protein 1	gene from Rattus norvegicus	2.5e-56
BLAST match view associations BLAST with Msi1 Msi1 Msi1 RNA-binding protein Musashi homolog 1	protein from Rattus norvegicus	2.5e-56
BLAST match view associations BLAST with MSI1 MSI1 MSI1 Uncharacterized protein	protein from Bos taurus	5.3e-56
BLAST match view associations BLAST with MSI1 MSI1 MSI1 Uncharacterized protein	protein from Canis lupus familiaris	1.4e-55
BLAST match view associations BLAST with msi1 msi1 msi1 musashi homolog 1 (Drosophila)	gene_product from Danio rerio	1.4e-55
BLAST match view associations BLAST with msi-1 msi-1 msi-1	gene from Caenorhabditis elegans	3.7e-55
BLAST match view associations BLAST with LOC100627974 LOC100627974 LOC100627974 Uncharacterized protein	protein from Sus scrofa	3.2e-49
BLAST match view associations BLAST with HRP1 HRP1 HRP1 Subunit of cleavage factor I	gene from Saccharomyces cerevisiae	8.6e-45
BLAST match view associations BLAST with dazap1 dazap1 dazap1 DAZ associated protein 1	gene_product from Danio rerio	9.6e-44
BLAST match view associations BLAST with dazap1 dazap1 dazap1 DAZ-associated protein 1	protein from Xenopus laevis	3.2e-43
BLAST match view associations BLAST with MSI1 MSI1 MSI1 Uncharacterized protein	protein from Canis lupus familiaris	3.5e-43
BLAST match view associations BLAST with Hnrnpdl Hnrnpdl Hnrnpdl heterogeneous nuclear ribonucleoprotein D-like	gene from Rattus norvegicus	1.5e-41
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Gallus gallus	3.6e-41
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Canis lupus familiaris	4.6e-41
BLAST match view associations BLAST with Dazap1 Dazap1 Dazap1 DAZ associated protein 1	gene from Rattus norvegicus	7.5e-41
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Bos taurus	1.2e-40
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-40
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 DAZ-associated protein 1	protein from Homo sapiens	1.2e-40
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Sus scrofa	1.2e-40
BLAST match view associations BLAST with Dazap1 Dazap1 Dazap1 DAZ associated protein 1	protein from Mus musculus	1.2e-40
BLAST match view associations BLAST with Hrb27C Hrb27C Hrb27C Heterogeneous nuclear ribonucleoprotein at 27C	protein from Drosophila melanogaster	1.7e-40
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Bos taurus	1.1e-39
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Gallus gallus	2.3e-39
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	6.1e-39
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	6.1e-39
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	6.1e-39
BLAST match view associations BLAST with Q9XSY6 Q9XSY6 Q9XSY6 HnRNP A/B related protein	protein from Felis catus	7.8e-39
BLAST match view associations BLAST with HNRPDL HNRPDL HNRPDL Heterogeneous nuclear ribonucleoprotein D-like	protein from Gallus gallus	1.3e-38
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab heterogeneous nuclear ribonucleoprotein A/B	gene from Rattus norvegicus	1.6e-38
BLAST match view associations BLAST with HNRPDL HNRPDL HNRPDL Uncharacterized protein	protein from Bos taurus	2.6e-38
BLAST match view associations BLAST with HNRPDL HNRPDL HNRPDL Uncharacterized protein	protein from Canis lupus familiaris	2.6e-38
BLAST match view associations BLAST with HNRPDL HNRPDL HNRPDL Heterogeneous nuclear ribonucleoprotein D-like	protein from Homo sapiens	2.6e-38
BLAST match view associations BLAST with Hnrnpdl1 Hnrnpdl1 Hnrnpdl1 heterogeneous nuclear ribonucleoprotein D-like	protein from Mus musculus	2.6e-38
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab RCG34663, isoform CRA_a	protein from Rattus norvegicus	3.4e-38
BLAST match view associations BLAST with hnrnpab hnrnpab hnrnpab heterogeneous nuclear ribonucleoprotein A/B	gene_product from Danio rerio	4.3e-38
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	5.5e-38
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab heterogeneous nuclear ribonucleoprotein A/B	protein from Mus musculus	5.5e-38
BLAST match view associations BLAST with hnrnpab hnrnpab hnrnpab Hnrpab-prov protein	protein from Xenopus laevis	7.0e-38
BLAST match view associations BLAST with Hnrpd Hnrpd Hnrpd Heterogeneous nuclear ribonucleoprotein D0	protein from Rattus norvegicus	7.0e-38
BLAST match view associations BLAST with HNRPD HNRPD HNRPD Heterogeneous nuclear ribonucleoprotein D	protein from Bos taurus	8.9e-38
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Uncharacterized protein	protein from Bos taurus	8.9e-38
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	8.9e-38
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Uncharacterized protein	protein from Canis lupus familiaris	1.5e-37
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	1.5e-37
BLAST match view associations BLAST with Hnrnpd Hnrnpd Hnrnpd heterogeneous nuclear ribonucleoprotein D	protein from Mus musculus	1.5e-37
BLAST match view associations BLAST with Hnrpd Hnrpd Hnrpd heterogeneous nuclear ribonucleoprotein D	gene from Rattus norvegicus	1.9e-37
BLAST match view associations BLAST with Hnrnpd Hnrnpd Hnrnpd Heterogeneous nuclear ribonucleoprotein D0	protein from Rattus norvegicus	1.9e-37
BLAST match view associations BLAST with MSI2 MSI2 MSI2 RNA-binding protein Musashi homolog 2	protein from Homo sapiens	2.4e-37
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 DAZ-associated protein 1	protein from Homo sapiens	3.0e-37
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	3.0e-37
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	3.0e-37
BLAST match view associations BLAST with hnrnpd hnrnpd hnrnpd heterogeneous nuclear ribonucleoprotein D	gene_product from Danio rerio	3.9e-37
BLAST match view associations BLAST with hnrnpa0b hnrnpa0b hnrnpa0b heterogeneous nuclear ribonucleoprotein A0b	gene_product from Danio rerio	5.1e-37
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Uncharacterized protein	protein from Gallus gallus	8.0e-37
BLAST match view associations BLAST with zgc:77052 zgc:77052 zgc:77052	gene_product from Danio rerio	1.7e-36
BLAST match view associations BLAST with HNRNPA1L2 HNRNPA1L2 HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1-like 2	protein from Homo sapiens	1.5e-35
BLAST match view associations BLAST with MSI1 MSI1 MSI1 RNA-binding protein Musashi homolog 1	protein from Homo sapiens	1.5e-35
BLAST match view associations BLAST with hnrpdl hnrpdl hnrpdl heterogeneous nuclear ribonucleoprotein D-like	gene_product from Danio rerio	1.5e-35
BLAST match view associations BLAST with HNRNPA0 HNRNPA0 HNRNPA0 Uncharacterized protein	protein from Bos taurus	2.4e-35
BLAST match view associations BLAST with HNRNPA0 HNRNPA0 HNRNPA0 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-35
BLAST match view associations BLAST with LOC100519826 LOC100519826 LOC100519826 Uncharacterized protein	protein from Sus scrofa	2.4e-35
BLAST match view associations BLAST with hnrnpa0a hnrnpa0a hnrnpa0a heterogeneous nuclear ribonucleoprotein A0a	gene_product from Danio rerio	2.4e-35
BLAST match view associations BLAST with AT3G07810 AT3G07810 AT3G07810	protein from Arabidopsis thaliana	2.4e-35
BLAST match view associations BLAST with LOC100859627 LOC100859627 LOC100859627 Uncharacterized protein	protein from Gallus gallus	2.4e-35
BLAST match view associations BLAST with HNRNPA0 HNRNPA0 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0	protein from Homo sapiens	3.1e-35
BLAST match view associations BLAST with AT5G55550 AT5G55550 AT5G55550	protein from Arabidopsis thaliana	3.1e-35
BLAST match view associations BLAST with HNRNPA3 HNRNPA3 HNRNPA3 Uncharacterized protein	protein from Bos taurus	3.1e-35
BLAST match view associations BLAST with HNRNPA3 HNRNPA3 HNRNPA3 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-35
BLAST match view associations BLAST with HNRNPA3 HNRNPA3 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3	protein from Homo sapiens	3.1e-35
BLAST match view associations BLAST with LOC100516520 LOC100516520 LOC100516520 Uncharacterized protein	protein from Sus scrofa	3.1e-35
BLAST match view associations BLAST with LOC100360986 LOC100360986 LOC100360986 mCG1035404-like	gene from Rattus norvegicus	3.1e-35
BLAST match view associations BLAST with Hnrnpa3 Hnrnpa3 Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3	gene from Rattus norvegicus	3.1e-35
BLAST match view associations BLAST with Hnrnpa0 Hnrnpa0 Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0	protein from Mus musculus	3.9e-35
BLAST match view associations BLAST with hnrnpa0l hnrnpa0l hnrnpa0l heterogeneous nuclear ribonucleoprotein A0, like	gene_product from Danio rerio	3.9e-35
BLAST match view associations BLAST with orf19.5989 orf19.5989 orf19.5989	gene_product from Candida albicans	4.0e-35
BLAST match view associations BLAST with sqd sqd sqd squid	protein from Drosophila melanogaster	4.0e-35
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Uncharacterized protein	protein from Gallus gallus	8.3e-35
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Saguinus oedipus	8.3e-35
BLAST match view associations BLAST with AT4G14300 AT4G14300 AT4G14300	protein from Arabidopsis thaliana	1.0e-34
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy6490
        (398 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0011666 - symbol:msi "musashi" species:7227 "Droso...   890  3.6e-89   1
UNIPROTKB|Q96DH6 - symbol:MSI2 "RNA-binding protein Musas...   612  1.0e-59   1
MGI|MGI:1923876 - symbol:Msi2 "musashi RNA-binding protei...   611  1.3e-59   1
FB|FBgn0260943 - symbol:Rbp6 "RNA-binding protein 6" spec...   608  2.7e-59   1
ZFIN|ZDB-GENE-040426-1268 - symbol:msi2b "musashi homolog...   594  8.4e-58   1
UNIPROTKB|B4DHE8 - symbol:MSI2 "RNA-binding protein Musas...   586  5.9e-57   1
ZFIN|ZDB-GENE-030826-25 - symbol:msi2a "musashi homolog 2...   586  5.9e-57   1
UNIPROTKB|O43347 - symbol:MSI1 "RNA-binding protein Musas...   581  2.0e-56   1
MGI|MGI:107376 - symbol:Msi1 "musashi RNA-binding protein...   580  2.5e-56   1
RGD|628778 - symbol:Msi1 "musashi RNA-binding protein 1" ...   580  2.5e-56   1
UNIPROTKB|Q8K3P4 - symbol:Msi1 "RNA-binding protein Musas...   580  2.5e-56   1
UNIPROTKB|F1MS42 - symbol:MSI1 "Uncharacterized protein" ...   577  5.3e-56   1
UNIPROTKB|E2RK48 - symbol:MSI1 "Uncharacterized protein" ...   573  1.4e-55   1
ZFIN|ZDB-GENE-050320-86 - symbol:msi1 "musashi homolog 1 ...   573  1.4e-55   1
WB|WBGene00003423 - symbol:msi-1 species:6239 "Caenorhabd...   569  3.7e-55   1
UNIPROTKB|F1LRH1 - symbol:Msi1 "RNA-binding protein Musas...   518  9.5e-50   1
UNIPROTKB|I3LPG0 - symbol:MSI1 "Uncharacterized protein" ...   513  3.2e-49   1
SGD|S000005483 - symbol:HRP1 "Subunit of cleavage factor ...   446  8.6e-45   2
ZFIN|ZDB-GENE-070212-1 - symbol:dazap1 "DAZ associated pr...   440  9.6e-44   2
UNIPROTKB|Q98SJ2 - symbol:dazap1 "DAZ-associated protein ...   436  3.2e-43   2
UNIPROTKB|J9PBP6 - symbol:MSI1 "Uncharacterized protein" ...   456  3.5e-43   1
RGD|1309950 - symbol:Hnrpdl "heterogeneous nuclear ribonu...   417  1.5e-41   2
UNIPROTKB|Q3SWU3 - symbol:Hnrpdl "Heterogeneous nuclear r...   417  1.5e-41   2
UNIPROTKB|F1NTG9 - symbol:DAZAP1 "Uncharacterized protein...   437  3.6e-41   1
UNIPROTKB|J9P972 - symbol:DAZAP1 "Uncharacterized protein...   436  4.6e-41   1
RGD|1305280 - symbol:Dazap1 "DAZ associated protein 1" sp...   434  7.5e-41   1
UNIPROTKB|E1BAK6 - symbol:DAZAP1 "Uncharacterized protein...   432  1.2e-40   1
UNIPROTKB|E2R6E4 - symbol:DAZAP1 "Uncharacterized protein...   432  1.2e-40   1
UNIPROTKB|Q96EP5 - symbol:DAZAP1 "DAZ-associated protein ...   432  1.2e-40   1
UNIPROTKB|I3LB68 - symbol:DAZAP1 "Uncharacterized protein...   432  1.2e-40   1
MGI|MGI:1917498 - symbol:Dazap1 "DAZ associated protein 1...   432  1.2e-40   1
UNIPROTKB|F2Z3S1 - symbol:Dazap1 "Protein Dazap1" species...   432  1.2e-40   1
FB|FBgn0004838 - symbol:Hrb27C "Heterogeneous nuclear rib...   410  1.7e-40   2
ASPGD|ASPL0000063757 - symbol:AN10941 species:162425 "Eme...   424  8.7e-40   1
UNIPROTKB|Q3ZC44 - symbol:HNRNPAB "Uncharacterized protei...   423  1.1e-39   1
UNIPROTKB|F1NIB2 - symbol:HNRNPAB "Uncharacterized protei...   420  2.3e-39   1
UNIPROTKB|F1NIB4 - symbol:HNRNPAB "Uncharacterized protei...   420  2.3e-39   1
UNIPROTKB|D6R9P3 - symbol:HNRNPAB "Heterogeneous nuclear ...   416  6.1e-39   1
UNIPROTKB|D6RBZ0 - symbol:HNRNPAB "Heterogeneous nuclear ...   416  6.1e-39   1
UNIPROTKB|D6RD18 - symbol:HNRNPAB "Heterogeneous nuclear ...   416  6.1e-39   1
UNIPROTKB|Q9XSY6 - symbol:Q9XSY6 "HnRNP A/B related prote...   415  7.8e-39   1
UNIPROTKB|E9PTS0 - symbol:Hnrnpab "Protein Hnrnpab" speci...   414  9.9e-39   1
UNIPROTKB|F1NCV5 - symbol:HNRPDL "Heterogeneous nuclear r...   413  1.3e-38   1
UNIPROTKB|Q5ZI72 - symbol:HNRPDL "Heterogeneous nuclear r...   413  1.3e-38   1
RGD|69255 - symbol:Hnrnpab "heterogeneous nuclear ribonuc...   412  1.6e-38   1
UNIPROTKB|F1N2T0 - symbol:HNRPDL "Uncharacterized protein...   410  2.6e-38   1
UNIPROTKB|E2QRT0 - symbol:HNRPDL "Uncharacterized protein...   410  2.6e-38   1
UNIPROTKB|O14979 - symbol:HNRPDL "Heterogeneous nuclear r...   410  2.6e-38   1
MGI|MGI:1355299 - symbol:Hnrpdl "heterogeneous nuclear ri...   410  2.6e-38   1
UNIPROTKB|Q9QX80 - symbol:Hnrnpab "Hnrpab protein" specie...   409  3.4e-38   1
UNIPROTKB|Q9QX81 - symbol:Hnrnpab "RCG34663, isoform CRA_...   409  3.4e-38   1
POMBASE|SPBC660.15 - symbol:SPBC660.15 "mRNA cleavage fac...   408  4.3e-38   1
ZFIN|ZDB-GENE-030131-185 - symbol:hnrnpab "heterogeneous ...   408  4.3e-38   1
UNIPROTKB|B4DTC3 - symbol:HNRNPD "cDNA FLJ54150, highly s...   407  5.5e-38   1
MGI|MGI:1330294 - symbol:Hnrnpab "heterogeneous nuclear r...   407  5.5e-38   1
UNIPROTKB|G3V6A4 - symbol:Hnrpd "Protein Hnrpd" species:1...   407  5.5e-38   1
UNIPROTKB|Q7ZYE9 - symbol:hnrnpab "Hnrpab-prov protein" s...   406  7.0e-38   1
UNIPROTKB|G3V6A5 - symbol:Hnrpd "Heterogeneous nuclear ri...   406  7.0e-38   1
UNIPROTKB|A5D9H5 - symbol:HNRPD "Heterogeneous nuclear ri...   405  8.9e-38   1
UNIPROTKB|A6H6Y0 - symbol:HNRNPD "Uncharacterized protein...   405  8.9e-38   1
UNIPROTKB|Q99729 - symbol:HNRNPAB "Heterogeneous nuclear ...   405  8.9e-38   1
UNIPROTKB|E2RIX2 - symbol:HNRNPD "Uncharacterized protein...   403  1.5e-37   1
UNIPROTKB|Q14103 - symbol:HNRNPD "Heterogeneous nuclear r...   403  1.5e-37   1
MGI|MGI:101947 - symbol:Hnrnpd "heterogeneous nuclear rib...   403  1.5e-37   1
RGD|620365 - symbol:Hnrpd "heterogeneous nuclear ribonucl...   402  1.9e-37   1
UNIPROTKB|Q9JJ54 - symbol:Hnrnpd "Heterogeneous nuclear r...   402  1.9e-37   1
UNIPROTKB|F1NCW4 - symbol:HNRNPD "Uncharacterized protein...   401  2.4e-37   1
UNIPROTKB|J3KTC1 - symbol:MSI2 "RNA-binding protein Musas...   379  2.4e-37   2
UNIPROTKB|K7EQ02 - symbol:DAZAP1 "DAZ-associated protein ...   400  3.0e-37   1
UNIPROTKB|H0Y8G5 - symbol:HNRNPD "Heterogeneous nuclear r...   400  3.0e-37   1
UNIPROTKB|H0YA96 - symbol:HNRNPD "Heterogeneous nuclear r...   400  3.0e-37   1
ZFIN|ZDB-GENE-070424-97 - symbol:hnrnpd "heterogeneous nu...   399  3.9e-37   1
ZFIN|ZDB-GENE-030131-6154 - symbol:hnrnpa0b "heterogeneou...   369  5.1e-37   2
UNIPROTKB|Q5ZIH1 - symbol:HNRNPD "Uncharacterized protein...   396  8.0e-37   1
ZFIN|ZDB-GENE-040426-2516 - symbol:zgc:77052 "zgc:77052" ...   393  1.7e-36   1
UNIPROTKB|Q32P51 - symbol:HNRNPA1L2 "Heterogeneous nuclea...   384  1.5e-35   1
UNIPROTKB|H0YHB7 - symbol:MSI1 "RNA-binding protein Musas...   384  1.5e-35   1
ZFIN|ZDB-GENE-040426-2717 - symbol:hnrpdl "heterogeneous ...   384  1.5e-35   1
UNIPROTKB|F6RSR1 - symbol:HNRNPA0 "Uncharacterized protei...   354  2.4e-35   2
UNIPROTKB|E2RBV8 - symbol:HNRNPA0 "Uncharacterized protei...   354  2.4e-35   2
UNIPROTKB|F1RH94 - symbol:HNRNPA0 "Uncharacterized protei...   354  2.4e-35   2
ZFIN|ZDB-GENE-030131-2249 - symbol:hnrnpa0a "heterogeneou...   353  2.4e-35   2
TAIR|locus:2077392 - symbol:AT3G07810 species:3702 "Arabi...   382  2.4e-35   1
UNIPROTKB|E1BZE6 - symbol:LOC100859627 "Uncharacterized p...   382  2.4e-35   1
UNIPROTKB|Q13151 - symbol:HNRNPA0 "Heterogeneous nuclear ...   353  3.1e-35   2
TAIR|locus:2173967 - symbol:AT5G55550 species:3702 "Arabi...   381  3.1e-35   1
UNIPROTKB|E1BEG2 - symbol:HNRNPA3 "Uncharacterized protei...   381  3.1e-35   1
UNIPROTKB|E2RFV7 - symbol:HNRNPA3 "Uncharacterized protei...   381  3.1e-35   1
UNIPROTKB|P51991 - symbol:HNRNPA3 "Heterogeneous nuclear ...   381  3.1e-35   1
UNIPROTKB|F2Z5B4 - symbol:HNRNPA3 "Uncharacterized protei...   381  3.1e-35   1
RGD|2321074 - symbol:LOC100360986 "mCG1035404-like" speci...   381  3.1e-35   1
RGD|727807 - symbol:Hnrnpa3 "heterogeneous nuclear ribonu...   381  3.1e-35   1
MGI|MGI:1924384 - symbol:Hnrnpa0 "heterogeneous nuclear r...   352  3.9e-35   2
ZFIN|ZDB-GENE-030131-618 - symbol:hnrnpa0l "heterogeneous...   351  3.9e-35   2
CGD|CAL0003460 - symbol:orf19.5989 species:5476 "Candida ...   380  4.0e-35   1
FB|FBgn0263396 - symbol:sqd "squid" species:7227 "Drosoph...   380  4.0e-35   1
UNIPROTKB|Q5ZME1 - symbol:HNRNPA2B1 "Uncharacterized prot...   377  8.3e-35   1
UNIPROTKB|Q9TTV2 - symbol:HNRNPA2B1 "Heterogeneous nuclea...   377  8.3e-35   1
TAIR|locus:2129590 - symbol:AT4G14300 species:3702 "Arabi...   354  1.0e-34   2
UNIPROTKB|F1NBB6 - symbol:LOC100859627 "Uncharacterized p...   376  1.1e-34   1

WARNING:  Descriptions of 1023 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0011666 [details] [associations]
            symbol:msi "musashi" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=IDA] [GO:0022416 "chaeta
            development" evidence=IMP] [GO:0003723 "RNA binding" evidence=ISM]
            [GO:0003729 "mRNA binding" evidence=ISS;NAS;TAS] [GO:0006397 "mRNA
            processing" evidence=ISS] [GO:0017148 "negative regulation of
            translation" evidence=IMP;TAS] [GO:0006417 "regulation of
            translation" evidence=TAS] [GO:0045182 "translation regulator
            activity" evidence=TAS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001709 "cell fate determination" evidence=TAS]
            [GO:0000900 "translation repressor activity, nucleic acid binding"
            evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
            [GO:0042078 "germ-line stem cell division" evidence=IMP]
            [GO:0071456 "cellular response to hypoxia" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:AE014297 GO:GO:0005634 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071456 GO:GO:0022416
            GO:GO:0001709 GO:GO:0019827 GO:GO:0000900 GO:GO:0042078 KO:K14411
            GeneTree:ENSGT00700000104255 HSSP:Q61474 ChiTaRS:msi
            FlyBase:FBgn0011666 EMBL:BT133366 RefSeq:NP_001247303.1
            RefSeq:NP_733108.2 UniGene:Dm.1334 SMR:Q8IMS8 MINT:MINT-296706
            STRING:Q8IMS8 EnsemblMetazoa:FBtr0084881 EnsemblMetazoa:FBtr0305218
            EnsemblMetazoa:FBtr0333664 GeneID:43087 KEGG:dme:Dmel_CG5099
            UCSC:CG5099-RB CTD:43087 InParanoid:Q8IMS8 OMA:PIKAFAC
            GenomeRNAi:43087 NextBio:832139 Uniprot:Q8IMS8
        Length = 634

 Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
 Identities = 175/227 (77%), Positives = 191/227 (84%)

Query:   137 QLVLVNGKSSGDSGRSTPT-----GDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDV 191
             Q  +     SG SGRSTP+     G DP   KLFVGGLSWQTSS+KL+EYF MFG VTDV
Sbjct:   173 QAAMGGSNKSGSSGRSTPSLSGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDV 232

Query:   192 LIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKK 251
             LIMKDP+TQRSRGFGFITF EP TVEKVLKVPIHTLDGKKIDPKHATPKNRP+  N+TKK
Sbjct:   233 LIMKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQANKTKK 292

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
             IFVGGVSQDTSAEEVKAYFSQFG VEETVMLMDQQTKRHRGFGFVTFENE+VVD +CEIH
Sbjct:   293 IFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIH 352

Query:   312 FHMIKNKKVECKKAQPKEAVQ-ANLLVGKRVILGPLGLRM-AAPAPI 356
             FH IKNKKVECKKAQPKEAV  A  L+ KR++LG LG+++  AP  +
Sbjct:   353 FHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQLPTAPGQL 399


>UNIPROTKB|Q96DH6 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
            "poly(U) RNA binding" evidence=IEA] [GO:0048864 "stem cell
            development" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 KO:K14411 OrthoDB:EOG48GW3J EMBL:BC001526
            EMBL:BC017560 EMBL:AK093888 IPI:IPI00073713 IPI:IPI00167806
            IPI:IPI00455161 RefSeq:NP_620412.1 RefSeq:NP_733839.1
            UniGene:Hs.658922 ProteinModelPortal:Q96DH6 SMR:Q96DH6
            IntAct:Q96DH6 STRING:Q96DH6 PhosphoSite:Q96DH6 DMDM:51316513
            PaxDb:Q96DH6 PRIDE:Q96DH6 DNASU:124540 Ensembl:ENST00000284073
            Ensembl:ENST00000322684 Ensembl:ENST00000579180 GeneID:124540
            KEGG:hsa:124540 UCSC:uc002iuz.1 UCSC:uc002iva.3 CTD:124540
            GeneCards:GC17P055334 HGNC:HGNC:18585 HPA:CAB022300 MIM:607897
            neXtProt:NX_Q96DH6 PharmGKB:PA38590 InParanoid:Q96DH6 OMA:ISDCTIM
            PhylomeDB:Q96DH6 ChiTaRS:MSI2 GenomeRNAi:124540 NextBio:81316
            ArrayExpress:Q96DH6 Bgee:Q96DH6 CleanEx:HS_MSI2
            Genevestigator:Q96DH6 GermOnline:ENSG00000153944 Uniprot:Q96DH6
        Length = 328

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 114/191 (59%), Positives = 145/191 (75%)

Query:   142 NGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQR 201
             NG S G SG +  +  DP   K+F+GGLSWQTS + LR+YF  FG + + ++M+DP T+R
Sbjct:     4 NG-SQGTSGSANDSQHDP--GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60

Query:   202 SRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQD 260
             SRGFGF+TFA+P +V+KVL  P H LD K IDPK A P+  +PK+  RTKKIFVGG+S +
Sbjct:    61 SRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120

Query:   261 TSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKV 320
             T  E+VK YF QFGKVE+ +++ D+ T RHRGFGFVTFENE+VV+ +CEIHFH I NK V
Sbjct:   121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180

Query:   321 ECKKAQPKEAV 331
             ECKKAQPKE +
Sbjct:   181 ECKKAQPKEVM 191

 Score = 182 (69.1 bits), Expect = 9.4e-12, P = 9.4e-12
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S  TS + ++ YFS+FG++ E +++ D  TKR RGFGFVTF +   VD +   
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81

Query:   311 HFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
               H + +K ++ K A P+ A    +   K++ +G L
Sbjct:    82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 117


>MGI|MGI:1923876 [details] [associations]
            symbol:Msi2 "musashi RNA-binding protein 2" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844
            "polysome" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
            evidence=IDA] [GO:0048864 "stem cell development" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1923876 GO:GO:0005737 GO:GO:0008266
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            GeneTree:ENSGT00700000104255 GO:GO:0048864 CTD:124540 ChiTaRS:MSI2
            EMBL:AB056102 EMBL:AB056103 EMBL:BK001483 EMBL:AK049637
            EMBL:AK049688 EMBL:AK051269 IPI:IPI00120924 IPI:IPI00462899
            IPI:IPI00462900 RefSeq:NP_473384.1 UniGene:Mm.400451
            UniGene:Mm.428433 UniGene:Mm.474737 ProteinModelPortal:Q920Q6
            SMR:Q920Q6 STRING:Q920Q6 PhosphoSite:Q920Q6 PaxDb:Q920Q6
            PRIDE:Q920Q6 Ensembl:ENSMUST00000092794 Ensembl:ENSMUST00000107909
            GeneID:76626 KEGG:mmu:76626 UCSC:uc007kvn.2 InParanoid:Q920Q6
            OMA:ENYISAA NextBio:345476 Bgee:Q920Q6 CleanEx:MM_MSI2
            Genevestigator:Q920Q6 GermOnline:ENSMUSG00000069769 Uniprot:Q920Q6
        Length = 346

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 114/191 (59%), Positives = 145/191 (75%)

Query:   142 NGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQR 201
             NG S G SG +  +  DP   K+F+GGLSWQTS + LR+YF  FG + + ++M+DP T+R
Sbjct:     4 NG-SPGTSGSANDSQHDP--GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60

Query:   202 SRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQD 260
             SRGFGF+TFA+P +V+KVL  P H LD K IDPK A P+  +PK+  RTKKIFVGG+S +
Sbjct:    61 SRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120

Query:   261 TSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKV 320
             T  E+VK YF QFGKVE+ +++ D+ T RHRGFGFVTFENE+VV+ +CEIHFH I NK V
Sbjct:   121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180

Query:   321 ECKKAQPKEAV 331
             ECKKAQPKE +
Sbjct:   181 ECKKAQPKEVM 191

 Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S  TS + ++ YFS+FG++ E +++ D  TKR RGFGFVTF +   VD +   
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81

Query:   311 HFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
               H + +K ++ K A P+ A    +   K++ +G L
Sbjct:    82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 117


>FB|FBgn0260943 [details] [associations]
            symbol:Rbp6 "RNA-binding protein 6" species:7227 "Drosophila
            melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            EMBL:AE014296 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005844 eggNOG:COG0724 KO:K14411 GeneTree:ENSGT00700000104255
            GO:GO:0048864 OMA:ENYISAA EMBL:AY122226 EMBL:S51715 PIR:F48110
            RefSeq:NP_001097631.1 RefSeq:NP_001097632.1 RefSeq:NP_730245.2
            UniGene:Dm.22292 HSSP:Q61474 ProteinModelPortal:Q9VVE5 SMR:Q9VVE5
            DIP:DIP-19056N IntAct:Q9VVE5 MINT:MINT-918255
            EnsemblMetazoa:FBtr0075285 GeneID:39919 KEGG:dme:Dmel_CG32169
            UCSC:CG32169-RA CTD:39919 FlyBase:FBgn0260943 InParanoid:Q9VVE5
            OrthoDB:EOG4MSBF6 GenomeRNAi:39919 NextBio:816085 Bgee:Q9VVE5
            Uniprot:Q9VVE5
        Length = 369

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 110/181 (60%), Positives = 144/181 (79%)

Query:   157 DDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETV 216
             +DP   K+F+GGLSWQTS E LR+YFG +G +++ ++MKDP T+RSRGFGF+TF++P +V
Sbjct:    26 NDP--GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSV 83

Query:   217 EKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGK 275
             +KVL    H LDGKK+DPK A P+   PK+  RTKKIFVGG+S  T+ E+VK+YF QFG 
Sbjct:    84 DKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGP 143

Query:   276 VEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAV-QAN 334
             +E+ +++ D+QT RHRGFGFVTF++E+VVD +CEIHFH I NK VECKKAQPKE +  AN
Sbjct:   144 IEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPAN 203

Query:   335 L 335
             L
Sbjct:   204 L 204

 Score = 186 (70.5 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 38/98 (38%), Positives = 55/98 (56%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLS  T+ E ++ YF  FG + D ++M D  T R RGFGF+TF   + V+KV ++
Sbjct:   119 KIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEI 178

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQD 260
               H ++ K ++ K A PK      N  K    G  + D
Sbjct:   179 HFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYD 216

 Score = 186 (70.5 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 38/108 (35%), Positives = 62/108 (57%)

Query:   239 PKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTF 298
             P +  ++ N   K+F+GG+S  TS E ++ YF ++G + E +++ D  T+R RGFGFVTF
Sbjct:    18 PCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTF 77

Query:   299 ENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
              +   VD +     H +  KKV+ K A P+ A    +   K++ +G L
Sbjct:    78 SDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGL 125


>ZFIN|ZDB-GENE-040426-1268 [details] [associations]
            symbol:msi2b "musashi homolog 2b (Drosophila)"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-040426-1268 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:BX000438
            EMBL:BX510988 EMBL:BX649247 EMBL:CR848815 EMBL:BC055251
            IPI:IPI00481779 RefSeq:NP_957403.1 UniGene:Dr.82489 SMR:Q7SXT6
            STRING:Q7SXT6 Ensembl:ENSDART00000100194 GeneID:394084
            KEGG:dre:394084 CTD:394084 InParanoid:Q7SXT6 OMA:NYISASP
            NextBio:20815041 Uniprot:Q7SXT6
        Length = 408

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 110/188 (58%), Positives = 140/188 (74%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S   SG    +  DP   K+F+GGLSWQTS + LR+YF  FG + + ++M+DP T+RSRG
Sbjct:     6 SQATSGSPNDSQHDP--GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRG 63

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSA 263
             FGF+TFA+  +V+KVL  P H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T  
Sbjct:    64 FGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVV 123

Query:   264 EEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECK 323
             E+VK YF QFGKVE+ +++ D+ T RHRGFGFVTFENE+VV+ +CEIHFH I NK VECK
Sbjct:   124 EDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECK 183

Query:   324 KAQPKEAV 331
             KAQPKE +
Sbjct:   184 KAQPKEVM 191

 Score = 183 (69.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S  TS + ++ YFS+FG++ E +++ D  TKR RGFGFVTF +   VD +   
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81

Query:   311 HFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
               H + +K ++ K A P+ A    +   K++ +G L
Sbjct:    82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 117

 Score = 43 (20.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query:   105 SSGDSGRSTPTGDDPTSAKLFVGGLN 130
             S   SG    +  DP   K+F+GGL+
Sbjct:     6 SQATSGSPNDSQHDP--GKMFIGGLS 29


>UNIPROTKB|B4DHE8 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 EMBL:AK295060 IPI:IPI00910884
            SMR:B4DHE8 STRING:B4DHE8 Ensembl:ENST00000416426 UCSC:uc010wnm.1
            Uniprot:B4DHE8
        Length = 324

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 105/169 (62%), Positives = 134/169 (79%)

Query:   164 LFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVP 223
             +F+GGLSWQTS + LR+YF  FG + + ++M+DP T+RSRGFGF+TFA+P +V+KVL  P
Sbjct:     1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60

Query:   224 IHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
              H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T  E+VK YF QFGKVE+ +++
Sbjct:    61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAV 331
              D+ T RHRGFGFVTFENE+VV+ +CEIHFH I NK VECKKAQPKE +
Sbjct:   121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVM 169

 Score = 191 (72.3 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 36/78 (46%), Positives = 50/78 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLS  T  E +++YF  FG V D ++M D  T R RGFGF+TF   + VEKV ++
Sbjct:    89 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI 148

Query:   223 PIHTLDGKKIDPKHATPK 240
               H ++ K ++ K A PK
Sbjct:   149 HFHEINNKMVECKKAQPK 166

 Score = 177 (67.4 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 35/95 (36%), Positives = 58/95 (61%)

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
             +F+GG+S  TS + ++ YFS+FG++ E +++ D  TKR RGFGFVTF +   VD +    
Sbjct:     1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60

Query:   312 FHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
              H + +K ++ K A P+ A    +   K++ +G L
Sbjct:    61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 95


>ZFIN|ZDB-GENE-030826-25 [details] [associations]
            symbol:msi2a "musashi homolog 2a (Drosophila)"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-030826-25 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            GeneTree:ENSGT00700000104255 OrthoDB:EOG48GW3J HSSP:Q61474
            EMBL:CR931799 EMBL:CR931806 EMBL:BC045335 IPI:IPI00489753
            RefSeq:NP_997961.1 UniGene:Dr.32677 SMR:Q7ZW10
            Ensembl:ENSDART00000099473 Ensembl:ENSDART00000132096
            GeneID:100002680 KEGG:dre:100002680 CTD:100002680 InParanoid:Q7ZW10
            OMA:MEADASQ NextBio:20785547 Uniprot:Q7ZW10
        Length = 388

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 109/184 (59%), Positives = 138/184 (75%)

Query:   149 SGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFI 208
             SG    +  DP   K+F+GGLSWQTS + LR+YF  FG + + ++M+DP T+RSRGFGFI
Sbjct:    10 SGSLNDSQHDP--GKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFI 67

Query:   209 TFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVK 267
             TFA+  +V+KVL  P H LD K IDPK A P+  +PK+  RTKKIFVGG+S  T  E+VK
Sbjct:    68 TFADVSSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSASTVVEDVK 127

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF QFGKVE+ +++ D+ T RHRGFGFVTFENE++V+ +CEIHFH I NK VECKKAQP
Sbjct:   128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMVECKKAQP 187

Query:   328 KEAV 331
             KE +
Sbjct:   188 KEVM 191

 Score = 177 (67.4 bits), Expect = 6.2e-11, P = 6.2e-11
 Identities = 34/96 (35%), Positives = 58/96 (60%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S  TS + ++ YF +FG++ E +++ D  TKR RGFGF+TF +   VD +   
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQ 81

Query:   311 HFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
               H + +K ++ K A P+ A    +   K++ +G L
Sbjct:    82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 117


>UNIPROTKB|O43347 [details] [associations]
            symbol:MSI1 "RNA-binding protein Musashi homolog 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
            "poly(U) RNA binding" evidence=IEA] [GO:0009725 "response to
            hormone stimulus" evidence=IEA] [GO:0030855 "epithelial cell
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=TAS] [GO:0007399 "nervous system development"
            evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0007399 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            EMBL:AB012851 EMBL:AC003982 EMBL:AB072590 EMBL:AB072591
            EMBL:AB072592 EMBL:AB073212 IPI:IPI00001007 RefSeq:NP_002433.1
            UniGene:Hs.158311 ProteinModelPortal:O43347 SMR:O43347
            IntAct:O43347 MINT:MINT-1432501 STRING:O43347 PhosphoSite:O43347
            PaxDb:O43347 PRIDE:O43347 DNASU:4440 Ensembl:ENST00000257552
            GeneID:4440 KEGG:hsa:4440 UCSC:uc001tye.1 CTD:4440
            GeneCards:GC12M120779 HGNC:HGNC:7330 HPA:CAB022337 MIM:603328
            neXtProt:NX_O43347 PharmGKB:PA31137 InParanoid:O43347 OMA:GLPGSHP
            OrthoDB:EOG48GW3J GenomeRNAi:4440 NextBio:17313 ArrayExpress:O43347
            Bgee:O43347 CleanEx:HS_MSI1 Genevestigator:O43347
            GermOnline:ENSG00000135097 Uniprot:O43347
        Length = 362

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 111/201 (55%), Positives = 145/201 (72%)

Query:   150 GRSTPTGD-DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFI 208
             G ++P    DP   K+F+GGLSWQT+ E LREYFG FG V + L+M+DP+T+RSRGFGF+
Sbjct:     9 GLASPDSPHDP--CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFV 66

Query:   209 TFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVK 267
             TF +   V+KVL    H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T+ E+VK
Sbjct:    67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVK 126

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF QFGKV++ +++ D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQP
Sbjct:   127 QYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQP 186

Query:   328 KEAVQANLLVGKRVILGPLGL 348
             KE +        R  + P G+
Sbjct:   187 KEVMSPTGSARGRSRVMPYGM 207


>MGI|MGI:107376 [details] [associations]
            symbol:Msi1 "musashi RNA-binding protein 1" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005844 "polysome" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009725
            "response to hormone stimulus" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:107376 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0009725 GO:GO:0005844
            GO:GO:0030855 eggNOG:COG0724 HOVERGEN:HBG002295 KO:K14411
            GeneTree:ENSGT00700000104255 CTD:4440 OMA:GLPGSHP OrthoDB:EOG48GW3J
            EMBL:D49654 EMBL:AK084019 IPI:IPI00121300 IPI:IPI00462260
            RefSeq:NP_032655.1 UniGene:Mm.5077 PDB:1UAW PDB:2MSS PDB:2MST
            PDB:2RS2 PDBsum:1UAW PDBsum:2MSS PDBsum:2MST PDBsum:2RS2
            ProteinModelPortal:Q61474 SMR:Q61474 STRING:Q61474
            PhosphoSite:Q61474 PaxDb:Q61474 PRIDE:Q61474 DNASU:17690
            Ensembl:ENSMUST00000150779 GeneID:17690 KEGG:mmu:17690
            UCSC:uc008zdu.1 UCSC:uc008zdv.1 InParanoid:Q61474 ChiTaRS:MSI1
            EvolutionaryTrace:Q61474 NextBio:292270 Bgee:Q61474 CleanEx:MM_MSI1
            Genevestigator:Q61474 GermOnline:ENSMUSG00000054256 Uniprot:Q61474
        Length = 362

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 111/201 (55%), Positives = 145/201 (72%)

Query:   150 GRSTPTGD-DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFI 208
             G ++P    DP   K+F+GGLSWQT+ E LREYFG FG V + L+M+DP+T+RSRGFGF+
Sbjct:     9 GLASPDSPHDP--CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFV 66

Query:   209 TFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVK 267
             TF +   V+KVL    H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T+ E+VK
Sbjct:    67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVK 126

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF QFGKV++ +++ D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQP
Sbjct:   127 HYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQP 186

Query:   328 KEAVQANLLVGKRVILGPLGL 348
             KE +        R  + P G+
Sbjct:   187 KEVMSPTGSARGRSRVMPYGM 207


>RGD|628778 [details] [associations]
            symbol:Msi1 "musashi RNA-binding protein 1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=NAS] [GO:0003727 "single-stranded RNA binding"
            evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0005844 "polysome"
            evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
            evidence=IEA;ISO] [GO:0009725 "response to hormone stimulus"
            evidence=IMP] [GO:0030855 "epithelial cell differentiation"
            evidence=IEP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
            RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
            SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
            KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
            Genevestigator:Q8K3P4 Uniprot:Q8K3P4
        Length = 362

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 111/201 (55%), Positives = 145/201 (72%)

Query:   150 GRSTPTGD-DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFI 208
             G ++P    DP   K+F+GGLSWQT+ E LREYFG FG V + L+M+DP+T+RSRGFGF+
Sbjct:     9 GLASPDSPHDP--CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFV 66

Query:   209 TFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVK 267
             TF +   V+KVL    H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T+ E+VK
Sbjct:    67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVK 126

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF QFGKV++ +++ D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQP
Sbjct:   127 HYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQP 186

Query:   328 KEAVQANLLVGKRVILGPLGL 348
             KE +        R  + P G+
Sbjct:   187 KEVMSPTGSARGRSRVMPYGM 207


>UNIPROTKB|Q8K3P4 [details] [associations]
            symbol:Msi1 "RNA-binding protein Musashi homolog 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
            RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
            SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
            KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
            Genevestigator:Q8K3P4 Uniprot:Q8K3P4
        Length = 362

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 111/201 (55%), Positives = 145/201 (72%)

Query:   150 GRSTPTGD-DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFI 208
             G ++P    DP   K+F+GGLSWQT+ E LREYFG FG V + L+M+DP+T+RSRGFGF+
Sbjct:     9 GLASPDSPHDP--CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFV 66

Query:   209 TFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVK 267
             TF +   V+KVL    H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T+ E+VK
Sbjct:    67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVK 126

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF QFGKV++ +++ D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQP
Sbjct:   127 HYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQP 186

Query:   328 KEAVQANLLVGKRVILGPLGL 348
             KE +        R  + P G+
Sbjct:   187 KEVMSPTGSARGRSRVMPYGM 207


>UNIPROTKB|F1MS42 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
            "polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
            EMBL:DAAA02045450 EMBL:DAAA02045451 IPI:IPI00718423
            Ensembl:ENSBTAT00000012926 Uniprot:F1MS42
        Length = 342

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 107/187 (57%), Positives = 139/187 (74%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSWQT+ E LREYFG FG V + L+M+DP+T+RSRGFGF+TF +   V+KVL  
Sbjct:     1 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 60

Query:   223 PIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
               H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T+ E+VK YF QFGKV++ ++
Sbjct:    61 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 120

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRV 341
             + D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQPKE +        R 
Sbjct:   121 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRS 180

Query:   342 ILGPLGL 348
              + P G+
Sbjct:   181 RVMPYGM 187


>UNIPROTKB|E2RK48 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
            GeneTree:ENSGT00700000104255 CTD:4440 EMBL:AAEX03014735
            RefSeq:XP_854252.2 Ensembl:ENSCAFT00000016345 GeneID:611488
            KEGG:cfa:611488 Uniprot:E2RK48
        Length = 362

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 110/201 (54%), Positives = 144/201 (71%)

Query:   150 GRSTPTGD-DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFI 208
             G ++P    DP   K+F+GGLSWQT+ E LREYFG FG V + L+M+DP+T+RSRGFGF+
Sbjct:     9 GLASPDSPHDP--CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFV 66

Query:   209 TFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVK 267
             TF +   V+KVL    H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T+ E+VK
Sbjct:    67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVK 126

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF QF KV++ +++ D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQP
Sbjct:   127 QYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQP 186

Query:   328 KEAVQANLLVGKRVILGPLGL 348
             KE +        R  + P G+
Sbjct:   187 KEVMSPTGSARGRSRVMPYGM 207


>ZFIN|ZDB-GENE-050320-86 [details] [associations]
            symbol:msi1 "musashi homolog 1 (Drosophila)"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0007417 "central
            nervous system development" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-050320-86 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007417 GO:GO:0003676 EMBL:AB698464 Uniprot:J4C3V8
        Length = 349

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 111/207 (53%), Positives = 145/207 (70%)

Query:   143 GKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRS 202
             G  S  S   +P   DP   K+F+GGLSWQT+ E L++YF  FG V + ++M+DP+T+RS
Sbjct:     5 GSQSNLSSSDSP--HDP--CKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRS 60

Query:   203 RGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDT 261
             RGFGF+TF +   V+KVL    H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T
Sbjct:    61 RGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT 120

Query:   262 SAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVE 321
             + E+VK YF QFGKV++ +++ D+ T RHRGFGFVTFENE+VV+ +CEIHFH I NK VE
Sbjct:   121 TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 180

Query:   322 CKKAQPKEAVQANLLVGKRVILGPLGL 348
             CKKAQPKE +        R  + P G+
Sbjct:   181 CKKAQPKEVMSPTGSSRGRARVMPYGM 207


>WB|WBGene00003423 [details] [associations]
            symbol:msi-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
            GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:Z35601 EMBL:AB036738
            PIR:T24148 RefSeq:NP_497799.1 UniGene:Cel.19474
            ProteinModelPortal:G5EFS2 SMR:G5EFS2 EnsemblMetazoa:R10E9.1.1
            EnsemblMetazoa:R10E9.1.2 GeneID:175514 KEGG:cel:CELE_R10E9.1
            CTD:175514 WormBase:R10E9.1 OMA:VADKVCE NextBio:888480
            Uniprot:G5EFS2
        Length = 320

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 102/187 (54%), Positives = 140/187 (74%)

Query:   146 SGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGF 205
             + DS   +    DP   K+F+GGLSWQT++E LR+YFG FG V + ++M+DP T+R+RGF
Sbjct:    31 NADSDDGSHGSQDP--GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGF 88

Query:   206 GFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAE 264
             GFITF +P +V+KVL    H LDGKKIDPK A PK  + K+  +TKK+F+GG+S  ++ E
Sbjct:    89 GFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLE 148

Query:   265 EVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKK 324
             ++K YF  +GKVE+ +++ D+ T+RHRGFGFVTF+++EV D +CEIHFH I  K VECKK
Sbjct:   149 DMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKK 208

Query:   325 AQPKEAV 331
             AQPKE +
Sbjct:   209 AQPKEVM 215

 Score = 195 (73.7 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 41/97 (42%), Positives = 61/97 (62%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S  T+AE ++ YF +FG+V E +++ D  TKR RGFGF+TF +   VD +   
Sbjct:    46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105

Query:   311 HFHMIKNKKVECKKAQPKEAVQANLLVG-KRVILGPL 346
               H +  KK++ K A PK   QA L+   K+V +G L
Sbjct:   106 REHELDGKKIDPKVAFPKRT-QAKLVTKTKKVFIGGL 141


>UNIPROTKB|F1LRH1 [details] [associations]
            symbol:Msi1 "RNA-binding protein Musashi homolog 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
            [GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:628778 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0005844 GeneTree:ENSGT00700000104255
            IPI:IPI00202463 Ensembl:ENSRNOT00000001532 ArrayExpress:F1LRH1
            Uniprot:F1LRH1
        Length = 329

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 98/174 (56%), Positives = 127/174 (72%)

Query:   176 EKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPK 235
             E LREYFG FG V + L+M+DP+T+RSRGFGF+TF +   V+KVL    H LD K IDPK
Sbjct:     1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60

Query:   236 HATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFG 294
              A P+  +PK+  RTKKIFVGG+S +T+ E+VK YF QFGKV++ +++ D+ T RHRGFG
Sbjct:    61 VAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFG 120

Query:   295 FVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPLGL 348
             FVTFE+E++V+ +CEIHFH I NK VECKKAQPKE +        R  + P G+
Sbjct:   121 FVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 174

 Score = 191 (72.3 bits), Expect = 7.9e-13, P = 7.9e-13
 Identities = 36/78 (46%), Positives = 50/78 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLS  T+ E ++ YF  FG V D ++M D  T R RGFGF+TF   + VEKV ++
Sbjct:    77 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 136

Query:   223 PIHTLDGKKIDPKHATPK 240
               H ++ K ++ K A PK
Sbjct:   137 HFHEINNKMVECKKAQPK 154


>UNIPROTKB|I3LPG0 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
            "polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
            EMBL:FP690339 Ensembl:ENSSSCT00000027694 Uniprot:I3LPG0
        Length = 332

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 97/174 (55%), Positives = 126/174 (72%)

Query:   176 EKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPK 235
             E LREYFG FG   + L+M+DP+T+RSRGFGF+TF +   V+KVL    H LD K IDPK
Sbjct:     1 EGLREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60

Query:   236 HATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFG 294
              A P+  +PK+  RTKKIFVGG+S +T+ E+VK YF QFGKV++ +++ D+ T RHRGFG
Sbjct:    61 VAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFG 120

Query:   295 FVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPLGL 348
             FVTFE+E++V+ +CEIHFH I NK VECKKAQPKE +        R  + P G+
Sbjct:   121 FVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 174

 Score = 193 (73.0 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 36/78 (46%), Positives = 51/78 (65%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLS  T+ E +++YF  FG V D ++M D  T R RGFGF+TF   + VEKV ++
Sbjct:    77 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 136

Query:   223 PIHTLDGKKIDPKHATPK 240
               H ++ K ++ K A PK
Sbjct:   137 HFHEINNKMVECKKAQPK 154


>SGD|S000005483 [details] [associations]
            symbol:HRP1 "Subunit of cleavage factor I" species:4932
            "Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA]
            [GO:0005849 "mRNA cleavage factor complex" evidence=IPI]
            [GO:0006379 "mRNA cleavage" evidence=IDA] [GO:0003729 "mRNA
            binding" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 SGD:S000005483
            EMBL:BK006948 GO:GO:0000184 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0010494 eggNOG:COG0724
            GO:GO:0006379 GO:GO:0005849 KO:K14411 GeneTree:ENSGT00700000104255
            EMBL:U35737 EMBL:U38535 EMBL:X95258 EMBL:Z74865 PIR:S66820
            RefSeq:NP_014518.1 PDB:2CJK PDB:2KM8 PDBsum:2CJK PDBsum:2KM8
            ProteinModelPortal:Q99383 SMR:Q99383 DIP:DIP-1371N IntAct:Q99383
            MINT:MINT-395353 STRING:Q99383 PaxDb:Q99383 PeptideAtlas:Q99383
            EnsemblFungi:YOL123W GeneID:853997 KEGG:sce:YOL123W CYGD:YOL123w
            HOGENOM:HOG000248803 OMA:AREEQDK OrthoDB:EOG4TF3VC
            EvolutionaryTrace:Q99383 NextBio:975491 Genevestigator:Q99383
            GermOnline:YOL123W Uniprot:Q99383
        Length = 534

 Score = 446 (162.1 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
 Identities = 80/172 (46%), Positives = 122/172 (70%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             S K+F+GGL+W T+ + LREYFG +G VTD+ IMKDP T RSRGFGF++F +P +V++V+
Sbjct:   158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
             K   H LDGK IDPK A P++     ++T KIFVGG+  D   +E + +FSQ+G + +  
Sbjct:   218 KTQ-HILDGKVIDPKRAIPRDEQ---DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQ 273

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
             +++D+ T + RGFGFVT+++ + VD +C+  F   K++K+E K+A+P+   Q
Sbjct:   274 LMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPRHMQQ 325

 Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 31/108 (28%), Positives = 63/108 (58%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             +++  +   + K+F+GG++ DT+ + ++ YF ++G V +  ++ D  T R RGFGF++FE
Sbjct:   149 RSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPLG 347
                 VD + +   H++  K ++ K+A P++        GK + +G +G
Sbjct:   209 KPSSVDEVVKTQ-HILDGKVIDPKRAIPRDEQDKT---GK-IFVGGIG 251

 Score = 157 (60.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
 Identities = 34/111 (30%), Positives = 60/111 (54%)

Query:   131 VVREAHQLVLVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTD 190
             VV+  H   +++GK   D  R+ P  +   + K+FVGG+      ++  E+F  +G + D
Sbjct:   216 VVKTQH---ILDGKVI-DPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIID 271

Query:   191 VLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN 241
               +M D  T +SRGFGF+T+   + V++V +        +KI+ K A P++
Sbjct:   272 AQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPRH 322

 Score = 42 (19.8 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
 Identities = 7/10 (70%), Positives = 9/10 (90%)

Query:   121 SAKLFVGGLN 130
             S K+F+GGLN
Sbjct:   158 SCKMFIGGLN 167


>ZFIN|ZDB-GENE-070212-1 [details] [associations]
            symbol:dazap1 "DAZ associated protein 1" species:7955
            "Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-070212-1 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
            EMBL:BX255969 EMBL:BX323045 IPI:IPI00961610
            Ensembl:ENSDART00000104362 Bgee:F1QBG2 Uniprot:F1QBG2
        Length = 407

 Score = 440 (159.9 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
 Identities = 92/193 (47%), Positives = 118/193 (61%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   GD+    KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F 
Sbjct:     3 SNLAGDE--IGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFK 60

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATP------KNRPKIG--------NRTKKIFVGGV 257
             +P  V  VL    H LDG+ IDPK  TP      K R K G        N++KKIFVGG+
Sbjct:    61 DPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGI 120

Query:   258 SQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKN 317
               +    E++ YF++FG V E VM+ D + +R RGFGF+TFE E+ VD    +HFH I  
Sbjct:   121 PHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMG 180

Query:   318 KKVECKKAQPKEA 330
             KKVE KKA+P+++
Sbjct:   181 KKVEVKKAEPRDS 193

 Score = 188 (71.2 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
 Identities = 37/98 (37%), Positives = 57/98 (58%)

Query:   144 KSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSR 203
             K+    G      D   S K+FVGG+       +LR+YF  FG VT+V+++ D   QR R
Sbjct:    95 KTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPR 154

Query:   204 GFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             GFGFITF   ++V++ + +  H + GKK++ K A P++
Sbjct:   155 GFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 192

 Score = 38 (18.4 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
 Identities = 10/19 (52%), Positives = 12/19 (63%)

Query:   112 STPTGDDPTSAKLFVGGLN 130
             S   GD+    KLFVGGL+
Sbjct:     3 SNLAGDE--IGKLFVGGLD 19


>UNIPROTKB|Q98SJ2 [details] [associations]
            symbol:dazap1 "DAZ-associated protein 1" species:8355
            "Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0030154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0003723
            CTD:26528 HOVERGEN:HBG002295 KO:K14411 EMBL:AY028920
            RefSeq:NP_001082088.1 UniGene:Xl.1666 ProteinModelPortal:Q98SJ2
            SMR:Q98SJ2 GeneID:398218 KEGG:xla:398218 Xenbase:XB-GENE-864805
            Uniprot:Q98SJ2
        Length = 360

 Score = 436 (158.5 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 90/191 (47%), Positives = 120/191 (62%)

Query:   156 GDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPET 215
             GD+    KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  
Sbjct:     6 GDE--IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 63

Query:   216 VEKVLKVPIHTLDGKKIDPKHATPK------NRPKIG----------NRTKKIFVGGVSQ 259
             V  VL    HTLDG+ IDPK  TP+      +RP+ G          +R+ KIFVGG+  
Sbjct:    64 VGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPH 123

Query:   260 DTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKK 319
             +    E+K YF++FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I  KK
Sbjct:   124 NCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKK 183

Query:   320 VECKKAQPKEA 330
             VE K+A+P+++
Sbjct:   184 VEVKRAEPRDS 194

 Score = 192 (72.6 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
 Identities = 35/88 (39%), Positives = 57/88 (64%)

Query:   154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
             P  ++  S K+FVGG+       +L+EYF  FG VT+V+++ D   QR RGFGFITF + 
Sbjct:   106 PRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDE 165

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ++V++ + +  H + GKK++ K A P++
Sbjct:   166 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 193

 Score = 37 (18.1 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query:   116 GDDPTSAKLFVGGLN 130
             GD+    KLFVGGL+
Sbjct:     6 GDE--IGKLFVGGLD 18


>UNIPROTKB|J9PBP6 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104255 EMBL:AAEX03014735
            Ensembl:ENSCAFT00000045257 OMA:LAQTRHE Uniprot:J9PBP6
        Length = 471

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 103/198 (52%), Positives = 132/198 (66%)

Query:   168 GLSWQTS----SEKLREYFGMFGAVTDVLIMKDPITQRSR--GFGFITFAEPETVEKVLK 221
             G SW       +E LREYFG FG V + L+M+DP+T+RSR  GFGF+TF +   V+KVL 
Sbjct:   109 GPSWSEGECVVTEGLREYFGQFGEVKECLVMRDPLTKRSRCRGFGFVTFMDQAGVDKVLA 168

Query:   222 VPIHTLDGK--KIDPKHATPKN-RPKIG--NRTKKIFVGGVSQDTSAEEVKAYFSQFGKV 276
                H LD K  +IDPK A P+  +PK+    RTKKIFVGG+S +T+ E+VK YF QF KV
Sbjct:   169 QSRHELDSKTVQIDPKVAFPRRAQPKVQMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKV 228

Query:   277 E-ETVMLM-DQQTKRHRG--FGFVTFENEEVVDHICEIHFHMIKNK--KVECKKAQPKEA 330
             + +  MLM D+ T RHRG  FGFVTFE+E++V+ +CEIHFH I NK  +VECKKAQPKE 
Sbjct:   229 QVDDAMLMFDKTTNRHRGVGFGFVTFESEDIVEKVCEIHFHEINNKMVQVECKKAQPKEV 288

Query:   331 VQANLLVGKRVILGPLGL 348
             +        R  + P G+
Sbjct:   289 MSPTGSARGRSRVMPYGM 306

 Score = 154 (59.3 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 35/84 (41%), Positives = 51/84 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVT--DVLIMKDPITQRSRG--FGFITFAEPETVEK 218
             K+FVGGLS  T+ E +++YF  F  V   D ++M D  T R RG  FGF+TF   + VEK
Sbjct:   203 KIFVGGLSVNTTVEDVKQYFEQFEKVQVDDAMLMFDKTTNRHRGVGFGFVTFESEDIVEK 262

Query:   219 VLKVPIHTLDGK--KIDPKHATPK 240
             V ++  H ++ K  +++ K A PK
Sbjct:   263 VCEIHFHEINNKMVQVECKKAQPK 286


>RGD|1309950 [details] [associations]
            symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein D-like"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1309950 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
            GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
            EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
            UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
            PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
            NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
        Length = 322

 Score = 417 (151.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
 Identities = 85/172 (49%), Positives = 109/172 (63%)

Query:   159 PTSA-KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVE 217
             PTS  K+F+GGLSW TS + L EY   FG V D  I  DP+T RSRGFGF+ F +  +V+
Sbjct:    47 PTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 106

Query:   218 KVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVE 277
             KVL++  H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E
Sbjct:   107 KVLELKEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIE 163

Query:   278 ETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
                + MD +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:   164 NIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 215

 Score = 165 (63.1 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 34/88 (38%), Positives = 54/88 (61%)

Query:   239 PKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTF 298
             P + P  GN   K+F+GG+S DTS +++  Y S+FG+V +  +  D  T R RGFGFV F
Sbjct:    43 PSSFPTSGN---KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 99

Query:   299 ENEEVVDHICEIHFHMIKNKKVECKKAQ 326
             ++   VD + E+  H +  K ++ K+A+
Sbjct:   100 KDAASVDKVLELKEHKLDGKLIDPKRAK 127

 Score = 40 (19.1 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query:   119 PTSA-KLFVGGLN 130
             PTS  K+F+GGL+
Sbjct:    47 PTSGNKMFIGGLS 59


>UNIPROTKB|Q3SWU3 [details] [associations]
            symbol:Hnrpdl "Heterogeneous nuclear ribonucleoprotein
            D-like" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1309950
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
            GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
            EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
            UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
            PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
            NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
        Length = 322

 Score = 417 (151.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
 Identities = 85/172 (49%), Positives = 109/172 (63%)

Query:   159 PTSA-KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVE 217
             PTS  K+F+GGLSW TS + L EY   FG V D  I  DP+T RSRGFGF+ F +  +V+
Sbjct:    47 PTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 106

Query:   218 KVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVE 277
             KVL++  H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E
Sbjct:   107 KVLELKEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIE 163

Query:   278 ETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
                + MD +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:   164 NIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 215

 Score = 165 (63.1 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 34/88 (38%), Positives = 54/88 (61%)

Query:   239 PKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTF 298
             P + P  GN   K+F+GG+S DTS +++  Y S+FG+V +  +  D  T R RGFGFV F
Sbjct:    43 PSSFPTSGN---KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 99

Query:   299 ENEEVVDHICEIHFHMIKNKKVECKKAQ 326
             ++   VD + E+  H +  K ++ K+A+
Sbjct:   100 KDAASVDKVLELKEHKLDGKLIDPKRAK 127

 Score = 40 (19.1 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query:   119 PTSA-KLFVGGLN 130
             PTS  K+F+GGL+
Sbjct:    47 PTSGNKMFIGGLS 59


>UNIPROTKB|F1NTG9 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 OMA:HNLDGRN
            GeneTree:ENSGT00700000104255 EMBL:AADN02058490 IPI:IPI00577519
            Ensembl:ENSGALT00000024525 ArrayExpress:F1NTG9 Uniprot:F1NTG9
        Length = 398

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 88/183 (48%), Positives = 115/183 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:     1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60

Query:   223 PIHTLDGKKIDPKHATPKN------RPKIG---------NRTKKIFVGGVSQDTSAEEVK 267
               HTLDG+ IDPK  TP+       RPK G         N++ KIFVGG+  +    E++
Sbjct:    61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELR 120

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P
Sbjct:   121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 180

Query:   328 KEA 330
             +++
Sbjct:   181 RDS 183

 Score = 192 (72.6 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 36/85 (42%), Positives = 56/85 (65%)

Query:   157 DDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETV 216
             D+  S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFITF + ++V
Sbjct:    98 DNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 157

Query:   217 EKVLKVPIHTLDGKKIDPKHATPKN 241
             ++ + +  H + GKK++ K A P++
Sbjct:   158 DQAVNMHFHDIMGKKVEVKRAEPRD 182


>UNIPROTKB|J9P972 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
            Ensembl:ENSCAFT00000049246 Uniprot:J9P972
        Length = 258

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 82/168 (48%), Positives = 111/168 (66%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:    56 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 115

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               HTLDG+ IDPK   P++     +++ KIFVGG+  +    E++ YF +FG V E VM+
Sbjct:   116 RPHTLDGRNIDPKQKGPRSD---NSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 172

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEA 330
              D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P+++
Sbjct:   173 YDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDS 220

 Score = 201 (75.8 bits), Expect = 8.3e-16, P = 8.3e-16
 Identities = 38/94 (40%), Positives = 59/94 (62%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             D  +  P  D+  S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGF
Sbjct:   126 DPKQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 185

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ITF + ++V++ + +  H + GKK++ K A P++
Sbjct:   186 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 219

 Score = 163 (62.4 bits), Expect = 5.5e-10, P = 5.5e-10
 Identities = 31/101 (30%), Positives = 57/101 (56%)

Query:   228 DGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQT 287
             +G    P H++   R       +K+FVGG+   T+ E +++YFSQ+G+V + V++ D+ T
Sbjct:    33 EGTSGAPSHSSVSARKAAQAALRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTT 92

Query:   288 KRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
              + RGFGFV F++   V  +     H +  + ++ K+  P+
Sbjct:    93 NQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKQKGPR 133


>RGD|1305280 [details] [associations]
            symbol:Dazap1 "DAZ associated protein 1" species:10116 "Rattus
            norvegicus" [GO:0001893 "maternal placenta development"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0007283 "spermatogenesis"
            evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0005844 "polysome" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1305280 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH474029 eggNOG:COG0724
            CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            OrthoDB:EOG40ZQXT OMA:GGYDMYN IPI:IPI00365961 EMBL:BC098930
            RefSeq:NP_001020913.1 UniGene:Rn.16769 SMR:Q4KLZ3 GeneID:362836
            KEGG:rno:362836 UCSC:RGD:1305280 InParanoid:Q4KLZ3 NextBio:681451
            Genevestigator:Q4KLZ3 Uniprot:Q4KLZ3
        Length = 405

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 87/182 (47%), Positives = 115/182 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:   223 PIHTLDGKKIDPKHATPKN------RPKIG--------NRTKKIFVGGVSQDTSAEEVKA 268
               HTLDG+ IDPK  TP+       RPK G        +++ KIFVGG+  +    E++ 
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELRE 130

Query:   269 YFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P+
Sbjct:   131 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 190

Query:   329 EA 330
             ++
Sbjct:   191 DS 192

 Score = 199 (75.1 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 38/92 (41%), Positives = 57/92 (61%)

Query:   150 GRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFIT 209
             G   P  D   S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFIT
Sbjct:   100 GWKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFIT 159

Query:   210 FAEPETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             F + ++V++ + +  H + GKK++ K A P++
Sbjct:   160 FEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 191


>UNIPROTKB|E1BAK6 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
            EMBL:DAAA02020260 IPI:IPI00701555 Ensembl:ENSBTAT00000026274
            Uniprot:E1BAK6
        Length = 396

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 87/183 (47%), Positives = 115/183 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:     1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60

Query:   223 PIHTLDGKKIDPKHATPKN------RPKIG---------NRTKKIFVGGVSQDTSAEEVK 267
               HTLDG+ IDPK  TP+       RPK G         +++ KIFVGG+  +    E++
Sbjct:    61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 120

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P
Sbjct:   121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 180

Query:   328 KEA 330
             +++
Sbjct:   181 RDS 183

 Score = 199 (75.1 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 37/88 (42%), Positives = 57/88 (64%)

Query:   154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
             P  D+  S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFITF + 
Sbjct:    95 PRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 154

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ++V++ + +  H + GKK++ K A P++
Sbjct:   155 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 182


>UNIPROTKB|E2R6E4 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
            GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
            RefSeq:XP_003432858.1 Ensembl:ENSCAFT00000031038 GeneID:100683271
            KEGG:cfa:100683271 Uniprot:E2R6E4
        Length = 407

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 87/183 (47%), Positives = 115/183 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:   223 PIHTLDGKKIDPKHATPKN------RPKIG---------NRTKKIFVGGVSQDTSAEEVK 267
               HTLDG+ IDPK  TP+       RPK G         +++ KIFVGG+  +    E++
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 130

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P
Sbjct:   131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190

Query:   328 KEA 330
             +++
Sbjct:   191 RDS 193

 Score = 199 (75.1 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 37/88 (42%), Positives = 57/88 (64%)

Query:   154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
             P  D+  S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFITF + 
Sbjct:   105 PRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 164

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ++V++ + +  H + GKK++ K A P++
Sbjct:   165 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 192


>UNIPROTKB|Q96EP5 [details] [associations]
            symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
            GO:GO:0003723 eggNOG:COG0724 EMBL:AF181719 EMBL:BC012062
            EMBL:AK056850 IPI:IPI00165230 IPI:IPI00335930 RefSeq:NP_061832.2
            RefSeq:NP_733829.1 UniGene:Hs.222510 PDB:2DGS PDB:2DH8 PDBsum:2DGS
            PDBsum:2DH8 ProteinModelPortal:Q96EP5 SMR:Q96EP5 IntAct:Q96EP5
            STRING:Q96EP5 PhosphoSite:Q96EP5 DMDM:44887869
            REPRODUCTION-2DPAGE:IPI00165230 PaxDb:Q96EP5 PRIDE:Q96EP5
            DNASU:26528 Ensembl:ENST00000233078 Ensembl:ENST00000336761
            GeneID:26528 KEGG:hsa:26528 UCSC:uc002lsm.3 UCSC:uc002lsn.3
            CTD:26528 GeneCards:GC19P001407 HGNC:HGNC:2683 HPA:HPA004201
            HPA:HPA004631 MIM:607430 neXtProt:NX_Q96EP5 PharmGKB:PA27153
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 InParanoid:Q96EP5 KO:K14411
            OMA:HNLDGRN OrthoDB:EOG40ZQXT PhylomeDB:Q96EP5 ChiTaRS:DAZAP1
            EvolutionaryTrace:Q96EP5 GenomeRNAi:26528 NextBio:48864
            ArrayExpress:Q96EP5 Bgee:Q96EP5 CleanEx:HS_DAZAP1
            Genevestigator:Q96EP5 GermOnline:ENSG00000071626 Uniprot:Q96EP5
        Length = 407

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 87/183 (47%), Positives = 115/183 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:   223 PIHTLDGKKIDPKHATPKN------RPKIG---------NRTKKIFVGGVSQDTSAEEVK 267
               HTLDG+ IDPK  TP+       RPK G         +++ KIFVGG+  +    E++
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 130

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P
Sbjct:   131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190

Query:   328 KEA 330
             +++
Sbjct:   191 RDS 193

 Score = 199 (75.1 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 37/88 (42%), Positives = 57/88 (64%)

Query:   154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
             P  D+  S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFITF + 
Sbjct:   105 PRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 164

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ++V++ + +  H + GKK++ K A P++
Sbjct:   165 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 192


>UNIPROTKB|I3LB68 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
            GeneTree:ENSGT00700000104255 EMBL:FP325262 RefSeq:NP_001231435.1
            UniGene:Ssc.1299 Ensembl:ENSSSCT00000023438 GeneID:100625005
            KEGG:ssc:100625005 Uniprot:I3LB68
        Length = 406

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 87/183 (47%), Positives = 115/183 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:   223 PIHTLDGKKIDPKHATPKN------RPKIG---------NRTKKIFVGGVSQDTSAEEVK 267
               HTLDG+ IDPK  TP+       RPK G         +++ KIFVGG+  +    E++
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 130

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P
Sbjct:   131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190

Query:   328 KEA 330
             +++
Sbjct:   191 RDS 193

 Score = 199 (75.1 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 37/88 (42%), Positives = 57/88 (64%)

Query:   154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
             P  D+  S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFITF + 
Sbjct:   105 PRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 164

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ++V++ + +  H + GKK++ K A P++
Sbjct:   165 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 192


>MGI|MGI:1917498 [details] [associations]
            symbol:Dazap1 "DAZ associated protein 1" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0001893 "maternal placenta development" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=ISA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
            [GO:0008283 "cell proliferation" evidence=IMP] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0035613 "RNA stem-loop binding"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917498 GO:GO:0007275
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 eggNOG:COG0724
            CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            ChiTaRS:DAZAP1 EMBL:AF225910 EMBL:BC049355 IPI:IPI00406492
            IPI:IPI00406493 RefSeq:NP_001116076.1 RefSeq:NP_001116077.1
            RefSeq:NP_573451.2 UniGene:Mm.148693 ProteinModelPortal:Q9JII5
            SMR:Q9JII5 STRING:Q9JII5 PhosphoSite:Q9JII5
            REPRODUCTION-2DPAGE:Q9JII5 PaxDb:Q9JII5 PRIDE:Q9JII5
            Ensembl:ENSMUST00000092305 Ensembl:ENSMUST00000105362 GeneID:70248
            KEGG:mmu:70248 UCSC:uc007gcl.2 UCSC:uc007gcm.2
            GeneTree:ENSGT00700000104255 InParanoid:Q9JII5 NextBio:331250
            Bgee:Q9JII5 CleanEx:MM_DAZAP1 Genevestigator:Q9JII5
            GermOnline:ENSMUSG00000069565 Uniprot:Q9JII5
        Length = 406

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 87/183 (47%), Positives = 115/183 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:   223 PIHTLDGKKIDPKHATPKN------RPKIG---------NRTKKIFVGGVSQDTSAEEVK 267
               HTLDG+ IDPK  TP+       RPK G         +++ KIFVGG+  +    E++
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELR 130

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P
Sbjct:   131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190

Query:   328 KEA 330
             +++
Sbjct:   191 RDS 193

 Score = 198 (74.8 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 37/88 (42%), Positives = 56/88 (63%)

Query:   154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
             P  D   S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFITF + 
Sbjct:   105 PRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 164

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ++V++ + +  H + GKK++ K A P++
Sbjct:   165 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 192


>UNIPROTKB|F2Z3S1 [details] [associations]
            symbol:Dazap1 "Protein Dazap1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1305280 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104255 IPI:IPI00365961
            ProteinModelPortal:F2Z3S1 SMR:F2Z3S1 PRIDE:F2Z3S1
            Ensembl:ENSRNOT00000046886 Uniprot:F2Z3S1
        Length = 406

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 87/183 (47%), Positives = 115/183 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:   223 PIHTLDGKKIDPKHATPKN------RPKIG---------NRTKKIFVGGVSQDTSAEEVK 267
               HTLDG+ IDPK  TP+       RPK G         +++ KIFVGG+  +    E++
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELR 130

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P
Sbjct:   131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190

Query:   328 KEA 330
             +++
Sbjct:   191 RDS 193

 Score = 198 (74.8 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 37/88 (42%), Positives = 56/88 (63%)

Query:   154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
             P  D   S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFITF + 
Sbjct:   105 PRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 164

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ++V++ + +  H + GKK++ K A P++
Sbjct:   165 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 192


>FB|FBgn0004838 [details] [associations]
            symbol:Hrb27C "Heterogeneous nuclear ribonucleoprotein at
            27C" species:7227 "Drosophila melanogaster" [GO:0030529
            "ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
            evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=NAS;TAS] [GO:0007319
            "negative regulation of oskar mRNA translation" evidence=TAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA;TAS] [GO:0007317
            "regulation of pole plasm oskar mRNA localization" evidence=IMP]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0045451 "pole
            plasm oskar mRNA localization" evidence=IMP] [GO:0048024
            "regulation of mRNA splicing, via spliceosome" evidence=IMP]
            [GO:0007298 "border follicle cell migration" evidence=IMP]
            [GO:0045727 "positive regulation of translation" evidence=IDA]
            [GO:0043234 "protein complex" evidence=IPI] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0007411 "axon guidance" evidence=IMP]
            [GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0007411 GO:GO:0043234 GO:GO:0005654
            EMBL:AE014134 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007298
            GO:GO:0048027 GO:GO:0003730 GO:GO:0003697 GO:GO:0030529
            GO:GO:0046331 GO:GO:0045727 GO:GO:0048024 GO:GO:0007319
            eggNOG:COG0724 GO:GO:0045451 KO:K14411 GeneTree:ENSGT00700000104255
            EMBL:X62639 EMBL:DQ062784 EMBL:AY069699 EMBL:AY128430 EMBL:S51720
            PIR:D41732 RefSeq:NP_001162897.1 RefSeq:NP_001162898.1
            RefSeq:NP_001245917.1 RefSeq:NP_001245918.1 RefSeq:NP_001245919.1
            RefSeq:NP_476869.1 RefSeq:NP_723228.1 RefSeq:NP_723229.1
            UniGene:Dm.1997 ProteinModelPortal:P48809 SMR:P48809 IntAct:P48809
            MINT:MINT-939547 STRING:P48809 PaxDb:P48809
            EnsemblMetazoa:FBtr0079346 EnsemblMetazoa:FBtr0079347
            EnsemblMetazoa:FBtr0079348 EnsemblMetazoa:FBtr0301403
            EnsemblMetazoa:FBtr0301404 EnsemblMetazoa:FBtr0307030
            EnsemblMetazoa:FBtr0307031 EnsemblMetazoa:FBtr0307032 GeneID:33968
            KEGG:dme:Dmel_CG10377 CTD:33968 FlyBase:FBgn0004838
            InParanoid:P48809 OMA:GGYDMYN OrthoDB:EOG4CJSZQ PhylomeDB:P48809
            ChiTaRS:Hrb27C GenomeRNAi:33968 NextBio:786189 Bgee:P48809
            GermOnline:CG10377 Uniprot:P48809
        Length = 421

 Score = 410 (149.4 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 76/175 (43%), Positives = 117/175 (66%)

Query:   157 DDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETV 216
             ++    KLFVGGLSW+T+ E L  YF  FG + D ++MK+  + RSRGFGF+TFA+P  V
Sbjct:     2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNV 61

Query:   217 EKVLKVPIHTLDGKKIDPKHATPKN--RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFG 274
               VL+   HTLDG+ IDPK   P+   +PK G   K +F+GG+  + +  +++ +F+++G
Sbjct:    62 NHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYK-VFLGGLPSNVTETDLRTFFNRYG 120

Query:   275 KVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             KV E V++ DQ+ K+ RGFGF++FE E  V+H+    +  +  K+VE KKA+P++
Sbjct:   121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175

 Score = 161 (61.7 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
 Identities = 32/96 (33%), Positives = 56/96 (58%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+FVGG+S +T+ E +  YF +FG + + V++ + ++ R RGFGFVTF +   V+H+ + 
Sbjct:     8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67

Query:   311 HFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
               H +  + ++ K   P+   +     G +V LG L
Sbjct:    68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGL 103

 Score = 37 (18.1 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query:   117 DDPTSAKLFVGGLN 130
             ++    KLFVGGL+
Sbjct:     2 EEDERGKLFVGGLS 15


>ASPGD|ASPL0000063757 [details] [associations]
            symbol:AN10941 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 EMBL:BN001304 ProteinModelPortal:C8VBB9
            EnsemblFungi:CADANIAT00000536 HOGENOM:HOG000162494 OMA:MNPAMMQ
            Uniprot:C8VBB9
        Length = 559

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 83/188 (44%), Positives = 122/188 (64%)

Query:   142 NGKSSGDSGRSTPTGDD-PTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQ 200
             N +++G  G   P G       K+F+GGL+W+T+ + L+EYF  FG V +  +M+D  T 
Sbjct:    89 NNQTTGPVGEPEPQGTGIKEDGKMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATG 148

Query:   201 RSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQD 260
             RSRGFGF+TF +P+TV  V+ V  H LDGK IDPK A P++  +   +T KIFVGGVSQ+
Sbjct:   149 RSRGFGFLTFKDPKTVNTVM-VKEHYLDGKIIDPKRAIPRDEQE---KTSKIFVGGVSQE 204

Query:   261 TSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKV 320
              + ++ K +F QFG+V +  +++D+ T R RGFGFVTF++E  V+        ++  K +
Sbjct:   205 ATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKTI 263

Query:   321 ECKKAQPK 328
             E KKAQP+
Sbjct:   264 EVKKAQPR 271


>UNIPROTKB|Q3ZC44 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 CTD:3182 OMA:FILFKDP EMBL:DAAA02020063
            EMBL:DAAA02020062 EMBL:BC102923 IPI:IPI00843025
            RefSeq:NP_001035612.1 UniGene:Bt.58979 SMR:Q3ZC44
            Ensembl:ENSBTAT00000018114 GeneID:513410 KEGG:bta:513410
            NextBio:20870841 Uniprot:Q3ZC44
        Length = 285

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 96/231 (41%), Positives = 130/231 (56%)

Query:   102 NGKSSGDSGRSTPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDDPTS 161
             NG  +   G S P G   T      GG +   +A      NG + GD   ++   +D  +
Sbjct:    18 NGHEAAPEGES-PAGTG-TGVAAGAGGGSAAPQAGNQ---NG-AEGDQINASKNEED--A 69

Query:   162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
              K+FVGGLSW TS + L++YF  FG V D  I  DP T RSRGFGFI F +  +VEKVL 
Sbjct:    70 GKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLD 129

Query:   222 VPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
                H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF +FG++E   +
Sbjct:   130 QKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIEAIEL 185

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              MD ++ + RGF F+TF+ EE V  + E  FH I   K E K AQPKE  Q
Sbjct:   186 PMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEVYQ 236


>UNIPROTKB|F1NIB2 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            GeneTree:ENSGT00700000104347 OMA:FILFKDP EMBL:AADN02028501
            EMBL:AADN02028502 EMBL:AADN02028503 IPI:IPI00574172
            Ensembl:ENSGALT00000023234 ArrayExpress:F1NIB2 Uniprot:F1NIB2
        Length = 263

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 83/170 (48%), Positives = 110/170 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLSW TS + L++YF  FG VTD  I  DP T RSRGFGFI F EP +VEKVL+ 
Sbjct:     1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF +FG++E   + 
Sbjct:    61 KEHRLDGRLIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 116

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
             MD +T + RGF F+TF+ E+ V  + E  FH +   K E K AQPKE  Q
Sbjct:   117 MDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPKEVYQ 166


>UNIPROTKB|F1NIB4 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 EMBL:AADN02028501 EMBL:AADN02028502
            EMBL:AADN02028503 IPI:IPI00603451 ProteinModelPortal:F1NIB4
            Ensembl:ENSGALT00000023233 ArrayExpress:F1NIB4 Uniprot:F1NIB4
        Length = 212

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 83/170 (48%), Positives = 110/170 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLSW TS + L++YF  FG VTD  I  DP T RSRGFGFI F EP +VEKVL+ 
Sbjct:     1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF +FG++E   + 
Sbjct:    61 KEHRLDGRLIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 116

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
             MD +T + RGF F+TF+ E+ V  + E  FH +   K E K AQPKE  Q
Sbjct:   117 MDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPKEVYQ 166


>UNIPROTKB|D6R9P3 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
            ChiTaRS:HNRNPAB IPI:IPI00964686 ProteinModelPortal:D6R9P3
            SMR:D6R9P3 Ensembl:ENST00000515193 ArrayExpress:D6R9P3 Bgee:D6R9P3
            Uniprot:D6R9P3
        Length = 280

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 95/231 (41%), Positives = 128/231 (55%)

Query:   102 NGKSSGDSGRSTPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDDPTS 161
             NG  +   G S P G   T A    GG      +      NG + GD   ++   +D  +
Sbjct:    18 NGHEAVPEGES-PAGAG-TGAAAGAGGATAAPPSGNQ---NG-AEGDQINASKNEED--A 69

Query:   162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
              K+FVGGLSW TS + L++YF  FG V D  I  DP T RSRGFGFI F +  +VEKVL 
Sbjct:    70 GKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 129

Query:   222 VPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
                H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF +FG++E   +
Sbjct:   130 QKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIEAIEL 185

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              MD +  + RGF F+TF+ EE V  + E  FH +   K E K AQPKE  Q
Sbjct:   186 PMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQ 236


>UNIPROTKB|D6RBZ0 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
            ChiTaRS:HNRNPAB IPI:IPI00964992 ProteinModelPortal:D6RBZ0
            SMR:D6RBZ0 Ensembl:ENST00000506339 ArrayExpress:D6RBZ0 Bgee:D6RBZ0
            Uniprot:D6RBZ0
        Length = 327

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 95/231 (41%), Positives = 128/231 (55%)

Query:   102 NGKSSGDSGRSTPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDDPTS 161
             NG  +   G S P G   T A    GG      +      NG + GD   ++   +D  +
Sbjct:    18 NGHEAVPEGES-PAGAG-TGAAAGAGGATAAPPSGNQ---NG-AEGDQINASKNEED--A 69

Query:   162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
              K+FVGGLSW TS + L++YF  FG V D  I  DP T RSRGFGFI F +  +VEKVL 
Sbjct:    70 GKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 129

Query:   222 VPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
                H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF +FG++E   +
Sbjct:   130 QKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIEAIEL 185

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              MD +  + RGF F+TF+ EE V  + E  FH +   K E K AQPKE  Q
Sbjct:   186 PMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQ 236


>UNIPROTKB|D6RD18 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
            ChiTaRS:HNRNPAB IPI:IPI00966854 ProteinModelPortal:D6RD18
            SMR:D6RD18 Ensembl:ENST00000514633 ArrayExpress:D6RD18 Bgee:D6RD18
            Uniprot:D6RD18
        Length = 283

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 95/231 (41%), Positives = 128/231 (55%)

Query:   102 NGKSSGDSGRSTPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDDPTS 161
             NG  +   G S P G   T A    GG      +      NG + GD   ++   +D  +
Sbjct:    18 NGHEAVPEGES-PAGAG-TGAAAGAGGATAAPPSGNQ---NG-AEGDQINASKNEED--A 69

Query:   162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
              K+FVGGLSW TS + L++YF  FG V D  I  DP T RSRGFGFI F +  +VEKVL 
Sbjct:    70 GKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 129

Query:   222 VPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
                H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF +FG++E   +
Sbjct:   130 QKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIEAIEL 185

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              MD +  + RGF F+TF+ EE V  + E  FH +   K E K AQPKE  Q
Sbjct:   186 PMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQ 236


>UNIPROTKB|Q9XSY6 [details] [associations]
            symbol:Q9XSY6 "HnRNP A/B related protein" species:9685
            "Felis catus" [GO:0001837 "epithelial to mesenchymal transition"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045893 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0001837 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
            Pfam:PF08143 EMBL:AF153444 ProteinModelPortal:Q9XSY6 Uniprot:Q9XSY6
        Length = 279

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 96/231 (41%), Positives = 129/231 (55%)

Query:   102 NGKSSGDSGRSTPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDDPTS 161
             NG  +   G S P G   T A    GG +    A      NG + GD   ++   +D  +
Sbjct:    12 NGHEAAPEGES-PAGAG-TGAAAGAGGGSAAPPAGNQ---NG-AEGDQINASKNEED--A 63

Query:   162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
              K+FVGGLSW TS + L++YF  FG V D  I   P T RS+GFGFI F +  +VEKVL 
Sbjct:    64 GKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEKVLD 123

Query:   222 VPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
                H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF +FG++E   +
Sbjct:   124 QKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIEAIEL 179

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              MD +T + RGF F+TF+ EE V  + E  FH I   K E K AQPKE  Q
Sbjct:   180 PMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEVYQ 230


>UNIPROTKB|E9PTS0 [details] [associations]
            symbol:Hnrnpab "Protein Hnrnpab" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC105470 IPI:IPI00951862
            Ensembl:ENSRNOT00000065584 ArrayExpress:E9PTS0 Uniprot:E9PTS0
        Length = 331

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 93/234 (39%), Positives = 130/234 (55%)

Query:   102 NGKSSGDSGRST--PT-GDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDD 158
             NG  +   G +   P+ G  P +     GG       +Q    NG + GD   ++   +D
Sbjct:    18 NGHEAAPEGEAPVEPSPGSGPATPAGSGGGTTAAPSGNQ----NG-AEGDQINASKNEED 72

Query:   159 PTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEK 218
               + K+FVGGLSW TS + L++YF  FG V D  I  DP T RSRGFGFI F +  +VEK
Sbjct:    73 --AGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 130

Query:   219 VLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEE 278
             VL    H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF QFG++E 
Sbjct:   131 VLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIEA 186

Query:   279 TVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
               + +D +  + RGF F+TF+ E+ V  + E  FH +   K E K AQPKE  Q
Sbjct:   187 IELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQ 240


>UNIPROTKB|F1NCV5 [details] [associations]
            symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
            D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GeneTree:ENSGT00700000104347 OMA:QHPPADN
            EMBL:AADN02009038 EMBL:AADN02009039 IPI:IPI00822447
            Ensembl:ENSGALT00000038016 Uniprot:F1NCV5
        Length = 338

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 83/167 (49%), Positives = 106/167 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW TS + L EY   FG V D  I  DP+T RSRGFGF+ F +  +VEKVL++
Sbjct:    67 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 126

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E   + 
Sbjct:   127 KEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP 183

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             MD +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:   184 MDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 230


>UNIPROTKB|Q5ZI72 [details] [associations]
            symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
            D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351
            GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 EMBL:AJ720912 IPI:IPI00591109
            RefSeq:NP_001026313.1 UniGene:Gga.4605 HSSP:Q14103
            ProteinModelPortal:Q5ZI72 SMR:Q5ZI72 PRIDE:Q5ZI72
            Ensembl:ENSGALT00000018235 GeneID:422601 KEGG:gga:422601 CTD:9987
            GeneTree:ENSGT00700000104347 KO:K13044 NextBio:20825211
            Uniprot:Q5ZI72
        Length = 301

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 83/167 (49%), Positives = 106/167 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW TS + L EY   FG V D  I  DP+T RSRGFGF+ F +  +VEKVL++
Sbjct:    31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E   + 
Sbjct:    91 KEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP 147

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             MD +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:   148 MDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 194


>RGD|69255 [details] [associations]
            symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
           species:10116 "Rattus norvegicus" [GO:0001837 "epithelial to
           mesenchymal transition" evidence=ISO] [GO:0003677 "DNA binding"
           evidence=IDA] [GO:0003688 "DNA replication origin binding"
           evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
           "cytoplasm" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
           evidence=ISO] [GO:0045892 "negative regulation of transcription,
           DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
           transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
           evidence=ISO] [GO:0003700 "sequence-specific DNA binding
           transcription factor activity" evidence=ISO] [GO:0043565
           "sequence-specific DNA binding" evidence=ISO] InterPro:IPR000504
           InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
           RGD:69255 GO:GO:0045892 GO:GO:0000166 Gene3D:3.30.70.330
           GO:GO:0003688 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
           Pfam:PF08143 PIR:PC4375 PIR:PC4376 PIR:PC4377 UniGene:Rn.1427
           UniGene:Rn.217734 EMBL:AF108653 IPI:IPI00208193
           ProteinModelPortal:Q9Z0U8 SMR:Q9Z0U8 IntAct:Q9Z0U8 MINT:MINT-7138483
           STRING:Q9Z0U8 PRIDE:Q9Z0U8 UCSC:RGD:69255 Genevestigator:Q9Z0U8
           Uniprot:Q9Z0U8
        Length = 298

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 81/191 (42%), Positives = 116/191 (60%)

Query:   142 NGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQR 201
             +G  +G+  +   + ++  + K+FVGGLSW TS + L++YF  FG V D  I  DP T R
Sbjct:    68 SGNQNGEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGR 127

Query:   202 SRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDT 261
             SRGFGFI F +  +VEKVL    H LDG+ IDPK A    +  +    KKIFVGG++ + 
Sbjct:   128 SRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEA 183

Query:   262 SAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVE 321
             + E+++ YF QFG++E   + +D +  + RGF F+TF+ E+ V  + E  FH +   K E
Sbjct:   184 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCE 243

Query:   322 CKKAQPKEAVQ 332
              K AQPKE  Q
Sbjct:   244 IKVAQPKEVYQ 254


>UNIPROTKB|F1N2T0 [details] [associations]
            symbol:HNRPDL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
            OMA:QHPPADN EMBL:DAAA02018246 IPI:IPI00697542 UniGene:Bt.23277
            PRIDE:F1N2T0 Ensembl:ENSBTAT00000019699 ArrayExpress:F1N2T0
            Uniprot:F1N2T0
        Length = 420

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 82/167 (49%), Positives = 106/167 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW TS + L EY   FG V D  I  DP+T RSRGFGF+ F +  +V+KVL++
Sbjct:   149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E   + 
Sbjct:   209 KEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP 265

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             MD +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:   266 MDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312


>UNIPROTKB|E2QRT0 [details] [associations]
            symbol:HNRPDL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 CTD:9987
            GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
            EMBL:AAEX03016723 RefSeq:XP_858404.1 Ensembl:ENSCAFT00000014224
            GeneID:476976 KEGG:cfa:476976 NextBio:20852539 Uniprot:E2QRT0
        Length = 420

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 82/167 (49%), Positives = 106/167 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW TS + L EY   FG V D  I  DP+T RSRGFGF+ F +  +V+KVL++
Sbjct:   149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E   + 
Sbjct:   209 KEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP 265

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             MD +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:   266 MDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312


>UNIPROTKB|O14979 [details] [associations]
            symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
            D-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0008143 "poly(A)
            RNA binding" evidence=IDA] [GO:0034046 "poly(G) RNA binding"
            evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=NAS]
            [GO:0006396 "RNA processing" evidence=NAS] [GO:0010468 "regulation
            of gene expression" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:D89678 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
            GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0005681
            GO:GO:0003723 GO:GO:0006396 GO:GO:0003690 GO:GO:0003697
            GO:GO:0010468 GO:GO:0034046 eggNOG:COG0724 GO:GO:0008143
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987
            KO:K13044 EMBL:AB017019 EMBL:D89092 EMBL:AB066484 EMBL:CR407623
            EMBL:AC124016 EMBL:AB017018 EMBL:BC007392 EMBL:BC011714
            EMBL:BC071944 EMBL:AY453824 IPI:IPI00011274 IPI:IPI00045498
            IPI:IPI00845282 PIR:JW0079 RefSeq:NP_001193929.1 RefSeq:NP_112740.1
            UniGene:Hs.527105 UniGene:Hs.731516 ProteinModelPortal:O14979
            SMR:O14979 IntAct:O14979 STRING:O14979 PhosphoSite:O14979
            PaxDb:O14979 PRIDE:O14979 DNASU:9987 Ensembl:ENST00000295470
            Ensembl:ENST00000349655 Ensembl:ENST00000502762 GeneID:9987
            KEGG:hsa:9987 UCSC:uc003hmr.3 GeneCards:GC04M083343 HGNC:HGNC:5037
            MIM:607137 neXtProt:NX_O14979 PharmGKB:PA29362 InParanoid:O14979
            OMA:QHPPADN OrthoDB:EOG49W2FZ PhylomeDB:O14979 ChiTaRS:HNRPDL
            GenomeRNAi:9987 NextBio:37714 ArrayExpress:O14979 Bgee:O14979
            CleanEx:HS_HNRPDL Genevestigator:O14979 Uniprot:O14979
        Length = 420

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 82/167 (49%), Positives = 106/167 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW TS + L EY   FG V D  I  DP+T RSRGFGF+ F +  +V+KVL++
Sbjct:   149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E   + 
Sbjct:   209 KEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP 265

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             MD +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:   266 MDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312


>MGI|MGI:1355299 [details] [associations]
            symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein
            D-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISA] [GO:0003690
            "double-stranded DNA binding" evidence=ISO] [GO:0003697
            "single-stranded DNA binding" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008143 "poly(A)
            RNA binding" evidence=ISO] [GO:0010468 "regulation of gene
            expression" evidence=ISO] [GO:0016071 "mRNA metabolic process"
            evidence=ISA] [GO:0034046 "poly(G) RNA binding" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1355299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0016071 GO:GO:0006355 GO:GO:0000166 GO:GO:0003677
            Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 eggNOG:COG0724
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103 ChiTaRS:HNRPDL
            EMBL:AB017020 EMBL:AK011581 EMBL:AK172629 EMBL:BC021374
            IPI:IPI00129417 UniGene:Mm.389579 ProteinModelPortal:Q9Z130
            SMR:Q9Z130 IntAct:Q9Z130 STRING:Q9Z130 PhosphoSite:Q9Z130
            PaxDb:Q9Z130 PRIDE:Q9Z130 InParanoid:Q9Z130 Bgee:Q9Z130
            CleanEx:MM_HNRPDL Genevestigator:Q9Z130 Uniprot:Q9Z130
        Length = 301

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 82/167 (49%), Positives = 106/167 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW TS + L EY   FG V D  I  DP+T RSRGFGF+ F +  +V+KVL++
Sbjct:    30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E   + 
Sbjct:    90 KEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP 146

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             MD +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:   147 MDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 193


>UNIPROTKB|Q9QX80 [details] [associations]
            symbol:Hnrnpab "Hnrpab protein" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            HSSP:Q14103 GeneTree:ENSGT00700000104347 KO:K13044
            InterPro:IPR012956 Pfam:PF08143 CTD:3182 EMBL:AC105470
            EMBL:AF216753 EMBL:BC066664 EMBL:AJ238855 IPI:IPI00212723
            PIR:PC4375 PIR:PC4376 PIR:PC4377 RefSeq:NP_112620.2
            RefSeq:XP_003750864.1 UniGene:Rn.1427 UniGene:Rn.217734 SMR:Q9QX80
            STRING:Q9QX80 Ensembl:ENSRNOT00000033056 GeneID:100910156
            GeneID:83498 KEGG:rno:100910156 KEGG:rno:83498 NextBio:615904
            Genevestigator:Q9QX80 Uniprot:Q9QX80
        Length = 285

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 92/235 (39%), Positives = 129/235 (54%)

Query:   102 NGKSSGDSGRS----TPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGD 157
             NG  +   G +    +P    P +     GG       +Q    NG + GD   ++   +
Sbjct:    18 NGHEAAPEGEAPVEPSPGAAAPATPAGSGGGTTAAPSGNQ----NG-AEGDQINASKNEE 72

Query:   158 DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVE 217
             D  + K+FVGGLSW TS + L++YF  FG V D  I  DP T RSRGFGFI F +  +VE
Sbjct:    73 D--AGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVE 130

Query:   218 KVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVE 277
             KVL    H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF QFG++E
Sbjct:   131 KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 186

Query:   278 ETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
                + +D +  + RGF F+TF+ E+ V  + E  FH +   K E K AQPKE  Q
Sbjct:   187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQ 241


>UNIPROTKB|Q9QX81 [details] [associations]
            symbol:Hnrnpab "RCG34663, isoform CRA_a" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0001837 "epithelial to mesenchymal transition" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69255 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 GO:GO:0001837
            EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
            GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 OMA:FILFKDP OrthoDB:EOG42BX9K EMBL:AC105470 PIR:PC4375
            PIR:PC4376 PIR:PC4377 UniGene:Rn.1427 UniGene:Rn.217734
            GeneID:100910156 KEGG:rno:100910156 EMBL:AJ238854 IPI:IPI00212724
            RefSeq:XP_003750865.1 SMR:Q9QX81 STRING:Q9QX81
            Ensembl:ENSRNOT00000004885 InParanoid:Q9QX81 Genevestigator:Q9QX81
            Uniprot:Q9QX81
        Length = 332

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 92/235 (39%), Positives = 129/235 (54%)

Query:   102 NGKSSGDSGRS----TPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGD 157
             NG  +   G +    +P    P +     GG       +Q    NG + GD   ++   +
Sbjct:    18 NGHEAAPEGEAPVEPSPGAAAPATPAGSGGGTTAAPSGNQ----NG-AEGDQINASKNEE 72

Query:   158 DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVE 217
             D  + K+FVGGLSW TS + L++YF  FG V D  I  DP T RSRGFGFI F +  +VE
Sbjct:    73 D--AGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVE 130

Query:   218 KVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVE 277
             KVL    H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF QFG++E
Sbjct:   131 KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 186

Query:   278 ETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
                + +D +  + RGF F+TF+ E+ V  + E  FH +   K E K AQPKE  Q
Sbjct:   187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQ 241


>POMBASE|SPBC660.15 [details] [associations]
            symbol:SPBC660.15 "mRNA cleavage factor complex subunit
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=NAS] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005849 "mRNA cleavage factor
            complex" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
            evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 PomBase:SPBC660.15 GO:GO:0005737 GO:GO:0000166
            EMBL:CU329671 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
            eggNOG:COG0724 GO:GO:0006379 GO:GO:0005849 KO:K14411 HSSP:Q14103
            OrthoDB:EOG4TF3VC PIR:T40627 RefSeq:NP_595094.1
            ProteinModelPortal:O94432 SMR:O94432 STRING:O94432
            EnsemblFungi:SPBC660.15.1 GeneID:2541150 KEGG:spo:SPBC660.15
            OMA:CHKANDG NextBio:20802263 Uniprot:O94432
        Length = 474

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 82/189 (43%), Positives = 120/189 (63%)

Query:   144 KSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSR 203
             +S+ D+   T +  +    K+F+GGL+W+T+ + LR+YF  FG V D  +M+D  T RSR
Sbjct:   146 ESNEDNAEET-SPFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSR 204

Query:   204 GFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSA 263
             GFGF+TF  P+ V +V+    H LDGK IDPK A P+   +   +T K+FVGGV  D + 
Sbjct:   205 GFGFLTFKNPKCVNEVMSKE-HHLDGKIIDPKRAIPREEQE---KTAKMFVGGVPGDCTE 260

Query:   264 EEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECK 323
             EE + +F+QFG+V +  ++MD+ T R RGFGFVT+ENE  V+      +  I  K VE K
Sbjct:   261 EEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVK 320

Query:   324 KAQPKEAVQ 332
             +A PK +++
Sbjct:   321 RATPKASLR 329


>ZFIN|ZDB-GENE-030131-185 [details] [associations]
            symbol:hnrnpab "heterogeneous nuclear
            ribonucleoprotein A/B" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-185
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
            EMBL:CU658205 IPI:IPI01023938 Ensembl:ENSDART00000148447
            ArrayExpress:F8W4E3 Uniprot:F8W4E3
        Length = 366

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 87/205 (42%), Positives = 117/205 (57%)

Query:   143 GKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRS 202
             G    D G+   +  +  + K+FVGGLSW TS + L++YF  FG VTD  I  DP T RS
Sbjct:    76 GDDGADGGQIDASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRS 135

Query:   203 RGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTS 262
             RGFGFI F EP  V+KVL    H LDG++IDPK A    +  +    KKIFVGG++ +T+
Sbjct:   136 RGFGFILFKEPSGVDKVLAQKEHRLDGRQIDPKKAMAMKKEPV----KKIFVGGLNPETT 191

Query:   263 AEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKK--- 319
              E ++ YF  FG++E   + MD ++ + RGF F+TF+ EE V  I E  +H +   K   
Sbjct:   192 EERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVSGTKDTS 251

Query:   320 -----VECKKAQPKEAVQANLLVGK 339
                   E K AQPKE  Q     G+
Sbjct:   252 GKEGLCEIKIAQPKEVYQQQQYGGR 276


>UNIPROTKB|B4DTC3 [details] [associations]
            symbol:HNRNPD "cDNA FLJ54150, highly similar to
            Heterogeneous nuclear ribonucleoprotein D0" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 HOGENOM:HOG000234441 HOVERGEN:HBG002295 EMBL:AC124016
            UniGene:Hs.480073 HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956
            Pfam:PF08143 EMBL:AK300149 IPI:IPI01014602 SMR:B4DTC3 STRING:B4DTC3
            Ensembl:ENST00000543098 Uniprot:B4DTC3
        Length = 303

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 84/198 (42%), Positives = 114/198 (57%)

Query:   143 GKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRS 202
             G +  +  +   + ++    K+F+GGLSW T+ + L++YF  FG V D  +  DPIT RS
Sbjct:    26 GSAESEGAKIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRS 85

Query:   203 RGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTS 262
             RGFGF+ F E E+V+KV+    H L+GK IDPK A      K     KKIFVGG+S DT 
Sbjct:    86 RGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTP 142

Query:   263 AEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVEC 322
              E+++ YF  FG+VE   + MD +T + RGF F+TF+ EE V  I E  +H +   K E 
Sbjct:   143 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEI 202

Query:   323 KKAQPKEAVQANLLVGKR 340
             K A  KE  Q     G R
Sbjct:   203 KVAMSKEQYQQQQQWGSR 220


>MGI|MGI:1330294 [details] [associations]
            symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
            evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003688 "DNA
            replication origin binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1330294 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0003677
            Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
            GO:GO:0001837 UniGene:Mm.490267 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
            InterPro:IPR012956 Pfam:PF08143 CTD:3182 OrthoDB:EOG42BX9K
            ChiTaRS:HNRNPAB EMBL:D90151 EMBL:L36663 EMBL:AK076132
            IPI:IPI00117288 PIR:JQ0448 RefSeq:NP_034578.1 UniGene:Mm.280842
            ProteinModelPortal:Q99020 SMR:Q99020 DIP:DIP-31415N IntAct:Q99020
            MINT:MINT-4132837 STRING:Q99020 PhosphoSite:Q99020 PaxDb:Q99020
            PRIDE:Q99020 Ensembl:ENSMUST00000074669 GeneID:15384 KEGG:mmu:15384
            NextBio:288056 Bgee:Q99020 Genevestigator:Q99020
            GermOnline:ENSMUSG00000020358 Uniprot:Q99020
        Length = 285

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 84/191 (43%), Positives = 116/191 (60%)

Query:   142 NGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQR 201
             NG + GD   ++   +D  + K+FVGGLSW TS + L++YF  FG V D  I  DP T R
Sbjct:    58 NG-AEGDQINASKNEED--AGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGR 114

Query:   202 SRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDT 261
             SRGFGFI F +  +VEKVL    H LDG+ IDPK A    +  +    KKIFVGG++ + 
Sbjct:   115 SRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEA 170

Query:   262 SAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVE 321
             + E+++ YF QFG++E   + +D +  + RGF F+TF+ E+ V  + E  FH +   K E
Sbjct:   171 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCE 230

Query:   322 CKKAQPKEAVQ 332
              K AQPKE  Q
Sbjct:   231 IKVAQPKEVYQ 241


>UNIPROTKB|G3V6A4 [details] [associations]
            symbol:Hnrpd "Protein Hnrpd" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620365 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 GeneTree:ENSGT00700000104347 KO:K13044
            InterPro:IPR012956 Pfam:PF08143 RefSeq:NP_001076009.1
            UniGene:Rn.94022 GeneID:79256 KEGG:rno:79256 CTD:79256
            NextBio:614748 EMBL:CH474022 Ensembl:ENSRNOT00000003158
            Uniprot:G3V6A4
        Length = 304

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 98/240 (40%), Positives = 131/240 (54%)

Query:   106 SGDSGRSTPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDDPTSA--- 162
             SG  G S P G +  S +    G  +  +A +    N +  G S  S+P   +  +A   
Sbjct:    43 SGSGGGSAPGGTEGGSTE--AEGAKI--DASK----NEEDEGHSN-SSPRHTEAATAQRE 93

Query:   163 --KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
               K+F+GGLSW T+ + L++YF  FG V D  +  DPIT RSRGFGF+ F E E+V+KV+
Sbjct:    94 EWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVM 153

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  FG+VE   
Sbjct:   154 DQKEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 210

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             + MD +T + RGF F+TF+ EE V  I E  +H +   K E K A  KE  Q     G R
Sbjct:   211 LPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 270


>UNIPROTKB|Q7ZYE9 [details] [associations]
            symbol:hnrnpab "Hnrpab-prov protein" species:8355 "Xenopus
            laevis" [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOVERGEN:HBG002295 HSSP:Q14103 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 CTD:3182 EMBL:BC043814 RefSeq:NP_001080489.1
            UniGene:Xl.45404 ProteinModelPortal:Q7ZYE9 SMR:Q7ZYE9 IntAct:Q7ZYE9
            GeneID:380181 KEGG:xla:380181 Xenbase:XB-GENE-6043063
            Uniprot:Q7ZYE9
        Length = 324

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 85/190 (44%), Positives = 113/190 (59%)

Query:   144 KSSGDSGRSTPTGDDPTSA-KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRS 202
             K   D+G         T   K+FVGGLSW TS + L++YF  FG V+D  I  DP T RS
Sbjct:    45 KGEEDAGCVADISSPLTEGVKMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRS 104

Query:   203 RGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTS 262
             RGFGFI F + E+V+KVL+   H LDG+ IDPK A    +  I    KKIFVGG++ +  
Sbjct:   105 RGFGFILFKDAESVDKVLEHKEHRLDGRLIDPKKAMAMKKDPI----KKIFVGGLNPEAG 160

Query:   263 AEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVEC 322
              ++++ YF  FG++E   + MD +T + RGF F+TF+ E+ V  I E  FH +   K E 
Sbjct:   161 EDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVSGSKCEI 220

Query:   323 KKAQPKEAVQ 332
             K AQPKE  Q
Sbjct:   221 KIAQPKEVYQ 230


>UNIPROTKB|G3V6A5 [details] [associations]
            symbol:Hnrpd "Heterogeneous nuclear ribonucleoprotein D,
            isoform CRA_c" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 RefSeq:NP_001076008.1 UniGene:Rn.94022 GeneID:79256
            KEGG:rno:79256 CTD:79256 NextBio:614748 EMBL:CH474022
            Ensembl:ENSRNOT00000003173 Uniprot:G3V6A5
        Length = 334

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 84/198 (42%), Positives = 114/198 (57%)

Query:   143 GKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRS 202
             G +  +  +   + ++    K+F+GGLSW T+ + L++YF  FG V D  +  DPIT RS
Sbjct:    57 GSTEAEGAKIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRS 116

Query:   203 RGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTS 262
             RGFGF+ F E E+V+KV+    H L+GK IDPK A      K     KKIFVGG+S DT 
Sbjct:   117 RGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTP 173

Query:   263 AEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVEC 322
              E+++ YF  FG+VE   + MD +T + RGF F+TF+ EE V  I E  +H +   K E 
Sbjct:   174 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEI 233

Query:   323 KKAQPKEAVQANLLVGKR 340
             K A  KE  Q     G R
Sbjct:   234 KVAMSKEQYQQQQQWGSR 251


>UNIPROTKB|A5D9H5 [details] [associations]
            symbol:HNRPD "Heterogeneous nuclear ribonucleoprotein D"
            species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 InterPro:IPR012956
            Pfam:PF08143 EMBL:DAAA02018245 EMBL:BT030594 IPI:IPI00905408
            RefSeq:NP_001091533.1 UniGene:Bt.52882 SMR:A5D9H5 STRING:A5D9H5
            Ensembl:ENSBTAT00000056365 GeneID:527471 KEGG:bta:527471
            NextBio:20874604 Uniprot:A5D9H5
        Length = 306

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 92/238 (38%), Positives = 125/238 (52%)

Query:   103 GKSSGDSGRSTPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDDPTSA 162
             G  +G  G +   G + +SA+     ++  +         G S+     S          
Sbjct:    42 GSGAGTGGGTAAGGTEGSSAESEGAKIDASKNEED----EGHSNSSPRHSEAATAQREEW 97

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW T+ + L++YF  FG V D  +  DPIT RSRGFGF+ F E E+V+KV+  
Sbjct:    98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  FG+VE   + 
Sbjct:   158 KEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELP 214

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             MD +T + RGF F+TF+ EE V  I E  +H +   K E K A  KE  Q     G R
Sbjct:   215 MDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 272


>UNIPROTKB|A6H6Y0 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            [GO:0042162 "telomeric DNA binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0030529 GO:GO:0043488 GO:GO:0042162 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 OrthoDB:EOG49W2FZ
            OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:DAAA02018245
            UniGene:Bt.52882 EMBL:BC146038 IPI:IPI00696935 SMR:A6H6Y0
            STRING:A6H6Y0 Ensembl:ENSBTAT00000018540 InParanoid:A6H6Y0
            Uniprot:A6H6Y0
        Length = 355

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 92/238 (38%), Positives = 125/238 (52%)

Query:   103 GKSSGDSGRSTPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDDPTSA 162
             G  +G  G +   G + +SA+     ++  +         G S+     S          
Sbjct:    42 GSGAGTGGGTAAGGTEGSSAESEGAKIDASKNEED----EGHSNSSPRHSEAATAQREEW 97

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW T+ + L++YF  FG V D  +  DPIT RSRGFGF+ F E E+V+KV+  
Sbjct:    98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  FG+VE   + 
Sbjct:   158 KEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELP 214

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             MD +T + RGF F+TF+ EE V  I E  +H +   K E K A  KE  Q     G R
Sbjct:   215 MDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 272


>UNIPROTKB|Q99729 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
            evidence=TAS] [GO:0001837 "epithelial to mesenchymal transition"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0001837
            EMBL:CH471165 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 KO:K13044 InterPro:IPR012956 Pfam:PF08143
            EMBL:M65028 EMBL:U76713 EMBL:AK054600 EMBL:AK097657 EMBL:BC001616
            EMBL:BC002625 EMBL:BC004561 EMBL:BC009359 EMBL:BC036708
            IPI:IPI00106509 IPI:IPI00329355 IPI:IPI00334587 IPI:IPI00334713
            PIR:S17563 RefSeq:NP_004490.2 RefSeq:NP_112556.2 UniGene:Hs.591731
            UniGene:Hs.715055 PDB:3S7R PDBsum:3S7R ProteinModelPortal:Q99729
            SMR:Q99729 IntAct:Q99729 MINT:MINT-4537784 STRING:Q99729
            PhosphoSite:Q99729 DMDM:158523286 SWISS-2DPAGE:Q99729 PaxDb:Q99729
            PRIDE:Q99729 Ensembl:ENST00000355836 Ensembl:ENST00000358344
            Ensembl:ENST00000504898 Ensembl:ENST00000506259 GeneID:3182
            KEGG:hsa:3182 UCSC:uc003miu.3 UCSC:uc003miv.3 CTD:3182
            GeneCards:GC05P177631 HGNC:HGNC:5034 HPA:HPA046688 MIM:602688
            neXtProt:NX_Q99729 PharmGKB:PA162391196 InParanoid:Q99729
            OMA:FILFKDP OrthoDB:EOG42BX9K ChiTaRS:HNRNPAB
            EvolutionaryTrace:Q99729 GenomeRNAi:3182 NextBio:12628
            ArrayExpress:Q99729 Bgee:Q99729 CleanEx:HS_HNRNPAB
            Genevestigator:Q99729 GermOnline:ENSG00000197451 Uniprot:Q99729
        Length = 332

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 86/192 (44%), Positives = 116/192 (60%)

Query:   142 NGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQR 201
             NG + GD   ++   +D  + K+FVGGLSW TS + L++YF  FG V D  I  DP T R
Sbjct:    52 NG-AEGDQINASKNEED--AGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGR 108

Query:   202 SRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDT 261
             SRGFGFI F +  +VEKVL    H LDG+ IDPK A    +  +    KKIFVGG++ ++
Sbjct:   109 SRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPES 164

Query:   262 SAEE-VKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKV 320
               EE ++ YF +FG++E   + MD +  + RGF F+TF+ EE V  + E  FH +   K 
Sbjct:   165 PTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKC 224

Query:   321 ECKKAQPKEAVQ 332
             E K AQPKE  Q
Sbjct:   225 EIKVAQPKEVYQ 236


>UNIPROTKB|E2RIX2 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
            GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 OMA:PNQNWNQ
            InterPro:IPR012956 Pfam:PF08143 EMBL:AAEX03016719
            RefSeq:XP_857957.1 Ensembl:ENSCAFT00000038801 GeneID:478450
            KEGG:cfa:478450 Uniprot:E2RIX2
        Length = 355

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 89/204 (43%), Positives = 117/204 (57%)

Query:   144 KSSGDSGRS--TPTGDDPTSA-----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKD 196
             K+  D G S  +P   +  +A     K+F+GGLSW T+ + L++YF  FG V D  +  D
Sbjct:    72 KNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131

Query:   197 PITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGG 256
             PIT RSRGFGF+ F E E+V+KV+    H L+GK IDPK A      K     KKIFVGG
Sbjct:   132 PITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGG 188

Query:   257 VSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIK 316
             +S DT  E+++ YF  FG+VE   + MD +T + RGF F+TF+ EE V  I E  +H + 
Sbjct:   189 LSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVG 248

Query:   317 NKKVECKKAQPKEAVQANLLVGKR 340
               K E K A  KE  Q     G R
Sbjct:   249 LSKCEIKVAMSKEQYQQQQQWGSR 272


>UNIPROTKB|Q14103 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA;NAS]
            [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0042162 "telomeric DNA binding" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0006396
            "RNA processing" evidence=TAS] [GO:0006401 "RNA catabolic process"
            evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
            "cytosol" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
            Reactome:REACT_21257 InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AF026126
            GO:GO:0005829 GO:GO:0045893 GO:GO:0005654 GO:GO:0000166
            Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006401 GO:GO:0048255 GO:GO:0030529 EMBL:CH471057
            GO:GO:0000398 GO:GO:0042162 eggNOG:COG0724 HOVERGEN:HBG002295
            KO:K13044 EMBL:AC124016 OrthoDB:EOG49W2FZ EMBL:D55671 EMBL:D55672
            EMBL:D55673 EMBL:D55674 EMBL:AK292707 EMBL:BC002401 EMBL:BC023977
            EMBL:BC026015 EMBL:X03910 EMBL:AF039575 EMBL:M94630 IPI:IPI00028888
            IPI:IPI00220683 IPI:IPI00220684 IPI:IPI00220685 PIR:A24016
            PIR:A44192 PIR:B48138 RefSeq:NP_001003810.1 RefSeq:NP_002129.2
            RefSeq:NP_112737.1 RefSeq:NP_112738.1 UniGene:Hs.480073 PDB:1HD0
            PDB:1HD1 PDB:1IQT PDB:1WTB PDB:1X0F PDB:2Z5N PDBsum:1HD0
            PDBsum:1HD1 PDBsum:1IQT PDBsum:1WTB PDBsum:1X0F PDBsum:2Z5N
            ProteinModelPortal:Q14103 SMR:Q14103 IntAct:Q14103
            MINT:MINT-5001251 STRING:Q14103 PhosphoSite:Q14103 DMDM:13124489
            SWISS-2DPAGE:Q14103 PaxDb:Q14103 PRIDE:Q14103 DNASU:3184
            Ensembl:ENST00000313899 Ensembl:ENST00000352301
            Ensembl:ENST00000353341 GeneID:3184 KEGG:hsa:3184 UCSC:uc003hmm.1
            UCSC:uc003hmn.1 UCSC:uc003hmo.1 UCSC:uc003hmp.1 CTD:3184
            GeneCards:GC04M083274 HGNC:HGNC:5036 HPA:HPA004911 MIM:601324
            neXtProt:NX_Q14103 PharmGKB:PA29361 InParanoid:Q14103 OMA:PNQNWNQ
            PhylomeDB:Q14103 ChiTaRS:HNRNPD EvolutionaryTrace:Q14103
            GenomeRNAi:3184 NextBio:12644 PMAP-CutDB:Q14103 ArrayExpress:Q14103
            Bgee:Q14103 Genevestigator:Q14103 GermOnline:ENSG00000138668
            InterPro:IPR012956 Pfam:PF08143 Uniprot:Q14103
        Length = 355

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 89/204 (43%), Positives = 117/204 (57%)

Query:   144 KSSGDSGRS--TPTGDDPTSA-----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKD 196
             K+  D G S  +P   +  +A     K+F+GGLSW T+ + L++YF  FG V D  +  D
Sbjct:    72 KNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131

Query:   197 PITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGG 256
             PIT RSRGFGF+ F E E+V+KV+    H L+GK IDPK A      K     KKIFVGG
Sbjct:   132 PITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGG 188

Query:   257 VSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIK 316
             +S DT  E+++ YF  FG+VE   + MD +T + RGF F+TF+ EE V  I E  +H + 
Sbjct:   189 LSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVG 248

Query:   317 NKKVECKKAQPKEAVQANLLVGKR 340
               K E K A  KE  Q     G R
Sbjct:   249 LSKCEIKVAMSKEQYQQQQQWGSR 272


>MGI|MGI:101947 [details] [associations]
            symbol:Hnrnpd "heterogeneous nuclear ribonucleoprotein D"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0042162
            "telomeric DNA binding" evidence=ISO] [GO:0043488 "regulation of
            mRNA stability" evidence=IMP] [GO:0048255 "mRNA stabilization"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:101947 GO:GO:0005829
            GO:GO:0005634 GO:GO:0006355 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0006351 GO:GO:0003723 GO:GO:0048255 GO:GO:0030529
            GO:GO:0043488 GO:GO:0042162 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
            OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ ChiTaRS:HNRNPD
            InterPro:IPR012956 Pfam:PF08143 EMBL:U11273 EMBL:U11274
            EMBL:BC011172 EMBL:BC049098 IPI:IPI00230086 IPI:IPI00330958
            IPI:IPI00336873 IPI:IPI00336874 PIR:I49069 PIR:I49070
            RefSeq:NP_001070733.1 RefSeq:NP_001070734.1 RefSeq:NP_001070735.1
            RefSeq:NP_031542.2 UniGene:Mm.150231 ProteinModelPortal:Q60668
            SMR:Q60668 DIP:DIP-31411N IntAct:Q60668 STRING:Q60668
            PhosphoSite:Q60668 PaxDb:Q60668 PRIDE:Q60668
            Ensembl:ENSMUST00000019128 Ensembl:ENSMUST00000172361 GeneID:11991
            KEGG:mmu:11991 UCSC:uc008ygt.1 UCSC:uc008ygu.1 InParanoid:Q60668
            NextBio:280159 Bgee:Q60668 Genevestigator:Q60668
            GermOnline:ENSMUSG00000000568 Uniprot:Q60668
        Length = 355

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 91/214 (42%), Positives = 120/214 (56%)

Query:   134 EAHQLVLVNGKSSGDSGRS--TPTGDDPTSA-----KLFVGGLSWQTSSEKLREYFGMFG 186
             EA    +   K+  D G S  +P   +  +A     K+F+GGLSW T+ + L++YF  FG
Sbjct:    62 EAEGAKIDASKNEEDEGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121

Query:   187 AVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIG 246
              V D  +  DPIT RSRGFGF+ F E E+V+KV+    H L+GK IDPK A      K  
Sbjct:   122 EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM---KTK 178

Query:   247 NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDH 306
                KKIFVGG+S DT  E+++ YF  FG+VE   + MD +T + RGF F+TF+ EE V  
Sbjct:   179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238

Query:   307 ICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             I E  +H +   K E K A  KE  Q     G R
Sbjct:   239 IMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 272


>RGD|620365 [details] [associations]
            symbol:Hnrpd "heterogeneous nuclear ribonucleoprotein D"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000291 "nuclear-transcribed mRNA catabolic
            process, exonucleolytic" evidence=TAS] [GO:0003723 "RNA binding"
            evidence=ISO;ISS] [GO:0003729 "mRNA binding" evidence=TAS]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
            evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA;ISO;ISS] [GO:0042162 "telomeric DNA binding"
            evidence=IEA;ISO;ISS] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA;ISO] [GO:0048255 "mRNA stabilization" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620365 GO:GO:0005829 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0006913 GO:GO:0048255 GO:GO:0030529
            GO:GO:0042162 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044
            OrthoDB:EOG49W2FZ GermOnline:ENSRNOG00000002292 InterPro:IPR012956
            Pfam:PF08143 EMBL:AB046615 EMBL:AB046616 EMBL:AB046617
            EMBL:AB046618 IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384
            IPI:IPI00231385 RefSeq:NP_001076008.1 RefSeq:NP_001076009.1
            RefSeq:NP_001076010.1 RefSeq:NP_077380.2 UniGene:Rn.94022
            ProteinModelPortal:Q9JJ54 SMR:Q9JJ54 STRING:Q9JJ54
            PhosphoSite:Q9JJ54 PRIDE:Q9JJ54 GeneID:79256 KEGG:rno:79256
            UCSC:RGD:620365 CTD:79256 InParanoid:Q9JJ54 NextBio:614748
            ArrayExpress:Q9JJ54 Genevestigator:Q9JJ54 GO:GO:0000291
            Uniprot:Q9JJ54
        Length = 353

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 91/214 (42%), Positives = 120/214 (56%)

Query:   134 EAHQLVLVNGKSSGDSGRS--TPTGDDPTSA-----KLFVGGLSWQTSSEKLREYFGMFG 186
             EA    +   K+  D G S  +P   +  +A     K+F+GGLSW T+ + L++YF  FG
Sbjct:    60 EAEGAKIDASKNEEDEGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 119

Query:   187 AVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIG 246
              V D  +  DPIT RSRGFGF+ F E E+V+KV+    H L+GK IDPK A      K  
Sbjct:   120 DVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM---KTK 176

Query:   247 NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDH 306
                KKIFVGG+S DT  E+++ YF  FG+VE   + MD +T + RGF F+TF+ EE V  
Sbjct:   177 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236

Query:   307 ICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             I E  +H +   K E K A  KE  Q     G R
Sbjct:   237 IMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 270


>UNIPROTKB|Q9JJ54 [details] [associations]
            symbol:Hnrnpd "Heterogeneous nuclear ribonucleoprotein D0"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0005829
            GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0006913 GO:GO:0048255 GO:GO:0030529 GO:GO:0042162
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044 OrthoDB:EOG49W2FZ
            GermOnline:ENSRNOG00000002292 InterPro:IPR012956 Pfam:PF08143
            EMBL:AB046615 EMBL:AB046616 EMBL:AB046617 EMBL:AB046618
            IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384 IPI:IPI00231385
            RefSeq:NP_001076008.1 RefSeq:NP_001076009.1 RefSeq:NP_001076010.1
            RefSeq:NP_077380.2 UniGene:Rn.94022 ProteinModelPortal:Q9JJ54
            SMR:Q9JJ54 STRING:Q9JJ54 PhosphoSite:Q9JJ54 PRIDE:Q9JJ54
            GeneID:79256 KEGG:rno:79256 UCSC:RGD:620365 CTD:79256
            InParanoid:Q9JJ54 NextBio:614748 ArrayExpress:Q9JJ54
            Genevestigator:Q9JJ54 GO:GO:0000291 Uniprot:Q9JJ54
        Length = 353

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 91/214 (42%), Positives = 120/214 (56%)

Query:   134 EAHQLVLVNGKSSGDSGRS--TPTGDDPTSA-----KLFVGGLSWQTSSEKLREYFGMFG 186
             EA    +   K+  D G S  +P   +  +A     K+F+GGLSW T+ + L++YF  FG
Sbjct:    60 EAEGAKIDASKNEEDEGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 119

Query:   187 AVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIG 246
              V D  +  DPIT RSRGFGF+ F E E+V+KV+    H L+GK IDPK A      K  
Sbjct:   120 DVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM---KTK 176

Query:   247 NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDH 306
                KKIFVGG+S DT  E+++ YF  FG+VE   + MD +T + RGF F+TF+ EE V  
Sbjct:   177 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236

Query:   307 ICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             I E  +H +   K E K A  KE  Q     G R
Sbjct:   237 IMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 270


>UNIPROTKB|F1NCW4 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
            evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
            GeneTree:ENSGT00700000104347 OMA:PNQNWNQ EMBL:AADN02009040
            IPI:IPI00819680 Ensembl:ENSGALT00000038011 ArrayExpress:F1NCW4
            Uniprot:F1NCW4
        Length = 258

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 83/178 (46%), Positives = 107/178 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW T+ + L++YF  FG V D  +  DPIT RSRGFGF+ F E E+V+KV+  
Sbjct:     1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 60

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  FG+VE   + 
Sbjct:    61 KEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGAFGEVESIELP 117

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             MD +T + RGF F+TF+ EE V  I E  +H +   K E K A  KE  Q     G R
Sbjct:   118 MDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 175


>UNIPROTKB|J3KTC1 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 Ensembl:ENST00000579590 Uniprot:J3KTC1
        Length = 141

 Score = 379 (138.5 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 70/117 (59%), Positives = 91/117 (77%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             S+K+F+GGLSWQTS + LR+YF  FG + + ++M+DP T+RSRGFGF+TFA+P +V+KVL
Sbjct:    16 SSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 75

Query:   221 KVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKV 276
               P H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T  E+VK YF QFGKV
Sbjct:    76 GQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 132

 Score = 183 (69.5 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 36/98 (36%), Positives = 60/98 (61%)

Query:   249 TKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHIC 308
             + K+F+GG+S  TS + ++ YFS+FG++ E +++ D  TKR RGFGFVTF +   VD + 
Sbjct:    16 SSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 75

Query:   309 EIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPL 346
                 H + +K ++ K A P+ A    +   K++ +G L
Sbjct:    76 GQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL 113

 Score = 38 (18.4 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 6/10 (60%), Positives = 10/10 (100%)

Query:   121 SAKLFVGGLN 130
             S+K+F+GGL+
Sbjct:    16 SSKMFIGGLS 25


>UNIPROTKB|K7EQ02 [details] [associations]
            symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
            Ensembl:ENST00000592453 Uniprot:K7EQ02
        Length = 225

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 79/169 (46%), Positives = 107/169 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL W T+ E LR YF  +G V D +IMKD  T +SRGFGF+ F +P  V  VL  
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGN-RTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
               HTLDG+         +  P+  N ++ KIFVGG+  +    E++ YF +FG V E VM
Sbjct:    71 RPHTLDGRN--------QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVM 122

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEA 330
             + D + +R RGFGF+TFE+E+ VD    +HFH I  KKVE K+A+P+++
Sbjct:   123 IYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDS 171

 Score = 199 (75.1 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 37/88 (42%), Positives = 57/88 (64%)

Query:   154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
             P  D+  S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFITF + 
Sbjct:    83 PRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 142

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ++V++ + +  H + GKK++ K A P++
Sbjct:   143 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 170


>UNIPROTKB|H0Y8G5 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
            ChiTaRS:HNRNPD Ensembl:ENST00000509263 Bgee:H0Y8G5 Uniprot:H0Y8G5
        Length = 261

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 83/178 (46%), Positives = 107/178 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW T+ + L++YF  FG V D  +  DPIT RSRGFGF+ F E E+V+KV+  
Sbjct:    31 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 90

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  FG+VE   + 
Sbjct:    91 KEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELP 147

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             MD +T + RGF F+TF+ EE V  I E  +H +   K E K A  KE  Q     G R
Sbjct:   148 MDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 205


>UNIPROTKB|H0YA96 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
            ChiTaRS:HNRNPD Ensembl:ENST00000514671 Uniprot:H0YA96
        Length = 210

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 83/178 (46%), Positives = 107/178 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW T+ + L++YF  FG V D  +  DPIT RSRGFGF+ F E E+V+KV+  
Sbjct:     2 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 61

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  FG+VE   + 
Sbjct:    62 KEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELP 118

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             MD +T + RGF F+TF+ EE V  I E  +H +   K E K A  KE  Q     G R
Sbjct:   119 MDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 176


>ZFIN|ZDB-GENE-070424-97 [details] [associations]
            symbol:hnrnpd "heterogeneous nuclear
            ribonucleoprotein D" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070424-97 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
            OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:CR847788
            IPI:IPI00512852 Ensembl:ENSDART00000101414
            Ensembl:ENSDART00000123048 Uniprot:F1Q8A5
        Length = 314

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 84/198 (42%), Positives = 114/198 (57%)

Query:   143 GKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRS 202
             G+   +  +   + ++    K+FVGGLSW T+ + L++YF  FG V D  +  DP+T RS
Sbjct:    35 GQGEAEGSKIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRS 94

Query:   203 RGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTS 262
             RGFGF+ F E E+VEKV+    H L+GK IDPK A      K     KKIFVGG+S DT 
Sbjct:    95 RGFGFVLFKEAESVEKVITQKEHKLNGKVIDPKKAKAM---KTKEPVKKIFVGGLSPDTP 151

Query:   263 AEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVEC 322
              E+++ YF  +G+VE   + M+ +T + RGF F+TF+ EE V  I E  +H I   K E 
Sbjct:   152 EEKIREYFDAYGEVESIELPMENKTNKRRGFCFITFKEEEPVKKIMEKKYHNIGLSKCEV 211

Query:   323 KKAQPKEAVQANLLVGKR 340
             K A  KE  Q     G R
Sbjct:   212 KVAMSKEQYQQQQQWGGR 229


>ZFIN|ZDB-GENE-030131-6154 [details] [associations]
            symbol:hnrnpa0b "heterogeneous nuclear
            ribonucleoprotein A0b" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-6154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12894
            EMBL:BC066434 IPI:IPI00507638 RefSeq:NP_999871.1 UniGene:Dr.35374
            ProteinModelPortal:Q6NYW8 SMR:Q6NYW8 STRING:Q6NYW8 PRIDE:Q6NYW8
            GeneID:334222 KEGG:dre:334222 CTD:334222 InParanoid:Q6NYW8
            OrthoDB:EOG4M65KN NextBio:20810313 ArrayExpress:Q6NYW8 Bgee:Q6NYW8
            Uniprot:Q6NYW8
        Length = 314

 Score = 369 (135.0 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
 Identities = 72/174 (41%), Positives = 110/174 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL+ QT+++ LR YF  FG +TD +++++   QRSR FGF+T++  E  +  +  
Sbjct:     9 KLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEADAAMAA 68

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DGK ++ K A  +    RP+   + KKIFVGG+  D   +++  +FSQFG +E++
Sbjct:    69 RPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFFSQFGMIEKS 128

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
              ++ D+ T + RGFGFV FE+ +  D    + FHMI   KVE KKA  K+ +QA
Sbjct:   129 EVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVEVKKALTKQEIQA 182

 Score = 45 (20.9 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
 Identities = 9/9 (100%), Positives = 9/9 (100%)

Query:   123 KLFVGGLNV 131
             KLFVGGLNV
Sbjct:     9 KLFVGGLNV 17


>UNIPROTKB|Q5ZIH1 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
            evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            UniGene:Gga.4605 GeneTree:ENSGT00700000104347 KO:K13044
            OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ EMBL:AADN02009040
            EMBL:AJ720813 IPI:IPI00597667 RefSeq:NP_001026314.1 SMR:Q5ZIH1
            STRING:Q5ZIH1 Ensembl:ENSGALT00000018234 GeneID:422602
            KEGG:gga:422602 InParanoid:Q5ZIH1 NextBio:20825212 Uniprot:Q5ZIH1
        Length = 257

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 82/177 (46%), Positives = 106/177 (59%)

Query:   164 LFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVP 223
             +F+GGLSW T+ + L++YF  FG V D  +  DPIT RSRGFGF+ F E E+V+KV+   
Sbjct:     1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60

Query:   224 IHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLM 283
              H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  FG+VE   + M
Sbjct:    61 EHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPM 117

Query:   284 DQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             D +T + RGF F+TF+ EE V  I E  +H +   K E K A  KE  Q     G R
Sbjct:   118 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 174

 Score = 171 (65.3 bits), Expect = 4.9e-11, P = 4.9e-11
 Identities = 40/102 (39%), Positives = 54/102 (52%)

Query:   141 VNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQ 200
             +NGK             +P   K+FVGGLS  T  EK+REYFG FG V  + +  D  T 
Sbjct:    64 LNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTN 122

Query:   201 RSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNR 242
             + RGF FITF E E V+K+++   H +   K + K A  K +
Sbjct:   123 KRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 164


>ZFIN|ZDB-GENE-040426-2516 [details] [associations]
            symbol:zgc:77052 "zgc:77052" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-2516 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 InterPro:IPR012956
            Pfam:PF08143 OrthoDB:EOG42BX9K EMBL:FP085391 EMBL:BC066681
            IPI:IPI00497482 RefSeq:NP_998467.1 UniGene:Dr.75633 SMR:Q6NYA1
            STRING:Q6NYA1 Ensembl:ENSDART00000098408 GeneID:406594
            KEGG:dre:406594 OMA:EIKTYFS NextBio:20818146 Uniprot:Q6NYA1
        Length = 309

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 85/199 (42%), Positives = 119/199 (59%)

Query:   140 LVNGKSSGDSGRSTPTGDDPT-----SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIM 194
             L  G+++G++G       D +     + K+FVGGLSW TS + L++YF  FG V D  I 
Sbjct:    18 LNGGEAAGENGAGEGLQIDASKCEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIK 77

Query:   195 KDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATP-KNRPKIGNRTKKIF 253
              D  T RSRGFGFI F E ++V++VL+   H LDG++IDPK A   K  P      KKIF
Sbjct:    78 MDSNTGRSRGFGFILFKESDSVDRVLQQKEHRLDGRQIDPKRAMAIKKEP-----VKKIF 132

Query:   254 VGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFH 313
             VGG++ +T+ E+++ YF  FG++E   +  D +T + RGF F+TF+ E  V  I E  +H
Sbjct:   133 VGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILEKKYH 192

Query:   314 MIKNKKVECKKAQPKEAVQ 332
              +   K E K AQPKE  Q
Sbjct:   193 NVCGSKCEIKIAQPKEIYQ 211


>UNIPROTKB|Q32P51 [details] [associations]
            symbol:HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein
            A1-like 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0000380 "alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
            GO:GO:0003723 GO:GO:0051028 eggNOG:COG0724 HSSP:Q61474
            EMBL:CH471124 EMBL:AK123159 EMBL:AL137058 EMBL:BC108266
            IPI:IPI00879501 RefSeq:NP_001011724.1 RefSeq:NP_001011725.1
            UniGene:Hs.447506 ProteinModelPortal:Q32P51 SMR:Q32P51
            IntAct:Q32P51 STRING:Q32P51 PhosphoSite:Q32P51 DMDM:190356061
            PaxDb:Q32P51 PRIDE:Q32P51 Ensembl:ENST00000342657
            Ensembl:ENST00000357495 Ensembl:ENST00000398039 GeneID:144983
            KEGG:hsa:144983 UCSC:uc001vgx.1 CTD:144983 GeneCards:GC13P053192
            HGNC:HGNC:27067 neXtProt:NX_Q32P51 PharmGKB:PA164720701
            HOGENOM:HOG000234442 InParanoid:Q32P51 KO:K12741 OMA:HYGSIVD
            OrthoDB:EOG4HQDKF GenomeRNAi:144983 NextBio:85023 Bgee:Q32P51
            Genevestigator:Q32P51 InterPro:IPR021662 Pfam:PF11627
            Uniprot:Q32P51
        Length = 320

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 71/170 (41%), Positives = 109/170 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNT 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 TPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +K    E +KA PK+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKALPKQ 184

 Score = 177 (67.4 bits), Expect = 3.4e-11, P = 3.4e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 152 (58.6 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 35/96 (36%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT+ G   + + A PK
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKALPK 183


>UNIPROTKB|H0YHB7 [details] [associations]
            symbol:MSI1 "RNA-binding protein Musashi homolog 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC003982 HGNC:HGNC:7330 Ensembl:ENST00000546985 Uniprot:H0YHB7
        Length = 233

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 74/134 (55%), Positives = 96/134 (71%)

Query:   216 VEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFG 274
             V+KVL    H LD K IDPK A P+  +PK+  RTKKIFVGG+S +T+ E+VK YF QFG
Sbjct:     6 VDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 65

Query:   275 KVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQAN 334
             KV++ +++ D+ T RHRGFGFVTFE+E++V+ +CEIHFH I NK VECKKAQPKE +   
Sbjct:    66 KVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPT 125

Query:   335 LLVGKRVILGPLGL 348
                  R  + P G+
Sbjct:   126 GSARGRSRVMPYGM 139

 Score = 193 (73.0 bits), Expect = 6.7e-15, P = 6.7e-15
 Identities = 36/78 (46%), Positives = 51/78 (65%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLS  T+ E +++YF  FG V D ++M D  T R RGFGF+TF   + VEKV ++
Sbjct:    42 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 101

Query:   223 PIHTLDGKKIDPKHATPK 240
               H ++ K ++ K A PK
Sbjct:   102 HFHEINNKMVECKKAQPK 119


>ZFIN|ZDB-GENE-040426-2717 [details] [associations]
            symbol:hnrpdl "heterogeneous nuclear
            ribonucleoprotein D-like" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-2717
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
            CTD:9987 GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
            OrthoDB:EOG49W2FZ EMBL:CR847788 EMBL:BC055525 IPI:IPI00500216
            RefSeq:NP_998557.1 UniGene:Dr.75234 SMR:Q7SXN2 STRING:Q7SXN2
            Ensembl:ENSDART00000020631 GeneID:406701 KEGG:dre:406701
            InParanoid:Q7SXN2 NextBio:20818224 Uniprot:Q7SXN2
        Length = 296

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 78/167 (46%), Positives = 104/167 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLSW TS + L +Y   FG V D  I  DP+T RSRGFGF+ F + E+V++VL++
Sbjct:    31 KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLEL 90

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDGK IDPK A      K     KK+FVGG+S D + E+++ YF  +G++E   + 
Sbjct:    91 TEHKLDGKLIDPKRA---KAIKGKEPPKKVFVGGLSPDITEEQLREYFGVYGEIESIELP 147

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              D +T   RGF FVTF  EE V  + E  +H I + K E K AQPKE
Sbjct:   148 TDTKTNERRGFCFVTFALEEPVQKLLENRYHQIGSGKCEIKVAQPKE 194

 Score = 168 (64.2 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 39/101 (38%), Positives = 56/101 (55%)

Query:   156 GDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPET 215
             G +P   K+FVGGLS   + E+LREYFG++G +  + +  D  T   RGF F+TFA  E 
Sbjct:   110 GKEPPK-KVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEP 168

Query:   216 VEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGG 256
             V+K+L+   H +   K + K A PK   +      + F GG
Sbjct:   169 VQKLLENRYHQIGSGKCEIKVAQPKEVYRQQQNRDRGFGGG 209


>UNIPROTKB|F6RSR1 [details] [associations]
            symbol:HNRNPA0 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
            "inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
            GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
            GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:DAAA02020383
            IPI:IPI00687625 Ensembl:ENSBTAT00000022514 Uniprot:F6RSR1
        Length = 310

 Score = 354 (129.7 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL+ QTS   LR +F  FG +TD +++ +P T+RSR FGF+T++  E  +  +  
Sbjct:    13 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 72

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG  ++ K A  +    RP    + KK+FVGG+  D +  ++  +FSQFG VE+ 
Sbjct:    73 SPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKA 132

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
              ++ D+Q+ + RGFGFV F+N +  D    + FH I+  +VE KKA PKE + +
Sbjct:   133 EIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIHS 186

 Score = 44 (20.5 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query:   123 KLFVGGLNV 131
             KLF+GGLNV
Sbjct:    13 KLFIGGLNV 21


>UNIPROTKB|E2RBV8 [details] [associations]
            symbol:HNRNPA0 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0070935 "3'-UTR-mediated mRNA
            stabilization" evidence=IEA] [GO:0032496 "response to
            lipopolysaccharide" evidence=IEA] [GO:0019901 "protein kinase
            binding" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0000166 GO:GO:0032496 GO:GO:0006954 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0070935 GeneTree:ENSGT00700000104255 CTD:10949
            KO:K12894 OMA:GPMKQNL EMBL:AAEX03007810 RefSeq:XP_538645.2
            ProteinModelPortal:E2RBV8 Ensembl:ENSCAFT00000001730 GeneID:481524
            KEGG:cfa:481524 NextBio:20856300 Uniprot:E2RBV8
        Length = 310

 Score = 354 (129.7 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL+ QTS   LR +F  FG +TD +++ +P T+RSR FGF+T++  E  +  +  
Sbjct:     8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG  ++ K A  +    RP    + KK+FVGG+  D +  ++  +FSQFG VE+ 
Sbjct:    68 SPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKA 127

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
              ++ D+Q+ + RGFGFV F+N +  D    + FH I+  +VE KKA PKE + +
Sbjct:   128 EIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIHS 181

 Score = 44 (20.5 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query:   123 KLFVGGLNV 131
             KLF+GGLNV
Sbjct:     8 KLFIGGLNV 16


>UNIPROTKB|F1RH94 [details] [associations]
            symbol:HNRNPA0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
            "inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
            GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
            GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:CU468422
            Ensembl:ENSSSCT00000015648 Uniprot:F1RH94
        Length = 315

 Score = 354 (129.7 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL+ QTS   LR +F  FG +TD +++ +P T+RSR FGF+T++  E  +  +  
Sbjct:    13 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 72

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG  ++ K A  +    RP    + KK+FVGG+  D +  ++  +FSQFG VE+ 
Sbjct:    73 SPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKA 132

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
              ++ D+Q+ + RGFGFV F+N +  D    + FH I+  +VE KKA PKE + +
Sbjct:   133 EIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIHS 186

 Score = 44 (20.5 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query:   123 KLFVGGLNV 131
             KLF+GGLNV
Sbjct:    13 KLFIGGLNV 21


>ZFIN|ZDB-GENE-030131-2249 [details] [associations]
            symbol:hnrnpa0a "heterogeneous nuclear
            ribonucleoprotein A0a" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-2249
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4W6NX4
            EMBL:BC066672 IPI:IPI00995382 RefSeq:NP_997810.1 UniGene:Dr.75559
            ProteinModelPortal:Q6NYB0 SMR:Q6NYB0 STRING:Q6NYB0 PRIDE:Q6NYB0
            GeneID:323529 KEGG:dre:323529 CTD:323529 InParanoid:Q6NYB0
            NextBio:20808302 ArrayExpress:Q6NYB0 Bgee:Q6NYB0 Uniprot:Q6NYB0
        Length = 305

 Score = 353 (129.3 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 68/174 (39%), Positives = 108/174 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL+ QT+ + LR +F  +G +TD +++++   +RSR FGF+T++ P+  +  +  
Sbjct:    11 KLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEADSAMSA 70

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H LDG  ++ K A  +    +P+   + KKIF+GG+  D   + ++  FSQFG VE+ 
Sbjct:    71 RPHILDGNNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEEDHLRDCFSQFGAVEKA 130

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
              ++ D++T + RGFGFV FE+ +  D    + FHMI   KVE KKA  K+ +QA
Sbjct:   131 EVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHMINGHKVEVKKALTKQEMQA 184

 Score = 157 (60.3 bits), Expect = 6.3e-09, P = 6.3e-09
 Identities = 34/102 (33%), Positives = 60/102 (58%)

Query:   247 NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDH 306
             N+  K+FVGG++  T+ + ++ +F Q+GK+ + V++ +QQ KR R FGFVT+ + +  D 
Sbjct:     7 NQLCKLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEADS 66

Query:   307 ICEIHFHMIKNKKVECKKAQPKE-AVQANLLVG-KRVILGPL 346
                   H++    VE K+A  +E A +   L   K++ +G L
Sbjct:    67 AMSARPHILDGNNVELKRAVAREDAGKPEALAKVKKIFIGGL 108

 Score = 45 (20.9 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 9/9 (100%), Positives = 9/9 (100%)

Query:   123 KLFVGGLNV 131
             KLFVGGLNV
Sbjct:    11 KLFVGGLNV 19


>TAIR|locus:2077392 [details] [associations]
            symbol:AT3G07810 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005576 "extracellular region" evidence=ISM] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K14411 IPI:IPI00546643 RefSeq:NP_850539.1 UniGene:At.19375
            ProteinModelPortal:F4JFN7 SMR:F4JFN7 PRIDE:F4JFN7
            EnsemblPlants:AT3G07810.2 GeneID:819972 KEGG:ath:AT3G07810
            OMA:YYIGNTN Uniprot:F4JFN7
        Length = 495

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 77/184 (41%), Positives = 111/184 (60%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             + KLF+GG+SW T+ E+L+EYF  FG V + +I+KD  T R+RGFGF+ FA+P   E V+
Sbjct:     5 NGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVI 64

Query:   221 KVPIHTLDGKKIDPKHATPK------NR---------PKIGNRTKKIFVGGVSQDTSAEE 265
                 H +DG+ ++ K A P+      NR         P    RT+KIFVGG+    +  +
Sbjct:    65 TEK-HNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query:   266 VKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKA 325
              K YF QFG   + V++ D  T+R RGFGF+T+++EE V+ +    FH +  K VE K+A
Sbjct:   124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query:   326 QPKE 329
              PKE
Sbjct:   184 VPKE 187

 Score = 210 (79.0 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 46/101 (45%), Positives = 60/101 (59%)

Query:   140 LVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPIT 199
             +VN +S+  S + +P G   T  K+FVGGL    +    + YF  FG  TDV++M D  T
Sbjct:    88 MVN-RSNSSSIQGSPGGPGRTR-KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNT 145

Query:   200 QRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             QR RGFGFIT+   E VEKVL    H L+GK ++ K A PK
Sbjct:   146 QRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPK 186


>UNIPROTKB|E1BZE6 [details] [associations]
            symbol:LOC100859627 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005730
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013
            GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:AADN02020007
            EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
            EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
            IPI:IPI00812068 ProteinModelPortal:E1BZE6
            Ensembl:ENSGALT00000038715 Uniprot:E1BZE6
        Length = 380

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 74/190 (38%), Positives = 117/190 (61%)

Query:   150 GRSTPTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGF 205
             GR +  G +P       KLF+GGLS++T+ + LRE+F  +G +TD ++M+DP T+RSRGF
Sbjct:    17 GRRSSQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGF 76

Query:   206 GFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTS 262
             GF+T++  E V+  +    H +DG+ ++PK A  +    +P      KKIFVGG+ +DT 
Sbjct:    77 GFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTE 136

Query:   263 AEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVEC 322
                ++ YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    +H I     E 
Sbjct:   137 EYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 196

Query:   323 KKAQPKEAVQ 332
             KKA  K+ +Q
Sbjct:   197 KKALSKQEMQ 206


>UNIPROTKB|Q13151 [details] [associations]
            symbol:HNRNPA0 "Heterogeneous nuclear ribonucleoprotein A0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0019901 "protein kinase binding" evidence=IPI] [GO:0017091
            "AU-rich element binding" evidence=IDA] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=ISS;TAS] [GO:0006954
            "inflammatory response" evidence=ISS] [GO:0032496 "response to
            lipopolysaccharide" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
            evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005654 EMBL:CH471062 GO:GO:0000166 GO:GO:0032496
            GO:GO:0006954 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0017091
            GO:GO:0030529 GO:GO:0000398 eggNOG:COG0724 GO:GO:0070935
            HOVERGEN:HBG002295 HOGENOM:HOG000234442 EMBL:U23803 EMBL:CR456986
            EMBL:BC001008 EMBL:BC007271 EMBL:BC009284 EMBL:BC011972
            EMBL:BC012980 EMBL:BC018949 EMBL:BC019271 EMBL:BC028976
            EMBL:BC030249 IPI:IPI00011913 RefSeq:NP_006796.1 UniGene:Hs.645902
            UniGene:Hs.96996 ProteinModelPortal:Q13151 SMR:Q13151 IntAct:Q13151
            MINT:MINT-5001237 STRING:Q13151 PhosphoSite:Q13151 DMDM:8134660
            REPRODUCTION-2DPAGE:Q13151 SWISS-2DPAGE:Q13151 PaxDb:Q13151
            PeptideAtlas:Q13151 PRIDE:Q13151 DNASU:10949
            Ensembl:ENST00000314940 GeneID:10949 KEGG:hsa:10949 UCSC:uc003lbt.3
            CTD:10949 GeneCards:GC05M137114 HGNC:HGNC:5030 HPA:HPA036569
            MIM:609409 neXtProt:NX_Q13151 PharmGKB:PA162391106
            InParanoid:Q13151 KO:K12894 OMA:GPMKQNL OrthoDB:EOG4W6NX4
            PhylomeDB:Q13151 GenomeRNAi:10949 NextBio:41601 Bgee:Q13151
            CleanEx:HS_HNRNPA0 Genevestigator:Q13151 GermOnline:ENSG00000177733
            Uniprot:Q13151
        Length = 305

 Score = 353 (129.3 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
 Identities = 69/172 (40%), Positives = 106/172 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL+ QTS   LR +F  FG +TD +++ +P T+RSR FGF+T++  E  +  +  
Sbjct:     8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG  ++ K A  +    RP    + KK+FVGG+  D +  ++  +FSQFG VE+ 
Sbjct:    68 SPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKA 127

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAV 331
              ++ D+Q+ + RGFGFV F+N +  D    + FH I+  +VE KKA PKE +
Sbjct:   128 EIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179

 Score = 44 (20.5 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query:   123 KLFVGGLNV 131
             KLF+GGLNV
Sbjct:     8 KLFIGGLNV 16


>TAIR|locus:2173967 [details] [associations]
            symbol:AT5G55550 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K14411 HSSP:Q61474 ProtClustDB:CLSN2689626 EMBL:AY050796
            EMBL:AY096460 IPI:IPI00543007 RefSeq:NP_568826.1 RefSeq:NP_974937.1
            UniGene:At.6910 ProteinModelPortal:Q949Z3 SMR:Q949Z3 PRIDE:Q949Z3
            EnsemblPlants:AT5G55550.2 EnsemblPlants:AT5G55550.3 GeneID:835649
            KEGG:ath:AT5G55550 TAIR:At5g55550 InParanoid:Q949Z3 OMA:VSERVIM
            PhylomeDB:Q949Z3 Genevestigator:Q949Z3 Uniprot:Q949Z3
        Length = 460

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 80/183 (43%), Positives = 113/183 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK- 221
             KLF+GG+SW T  E+LR+YF  +G V + +IM+D  T R+RGFGFI FA+P   E+V+  
Sbjct:     7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66

Query:   222 ---VPIHTLDGKKIDPK--------HATPKN--RPKIGN--RTKKIFVGGVSQDTSAEEV 266
                +   T++ KK  P+        HA+P +   P  G   RTKKIFVGG+    + EE 
Sbjct:    67 KHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEF 126

Query:   267 KAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQ 326
             K YF QFG + + V++ D  T+R RGFGF+TF++++ VD +    FH +  K VE K+A 
Sbjct:   127 KNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAV 186

Query:   327 PKE 329
             PKE
Sbjct:   187 PKE 189

 Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 45/120 (37%), Positives = 65/120 (54%)

Query:   156 GDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPET 215
             G    + K+FVGGL    + E+ + YF  FG + DV++M D  TQR RGFGFITF   + 
Sbjct:   104 GGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDA 163

Query:   216 VEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKA--YFSQF 273
             V++VL    H L+GK ++ K A PK    + N  +     GV+    +  + A  YF+ F
Sbjct:   164 VDRVLHKTFHELNGKLVEVKRAVPKEISPVSN-IRSPLASGVNYGGGSNRMPANSYFNNF 222

 Score = 172 (65.6 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 34/82 (41%), Positives = 52/82 (63%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S DT  E ++ YFS +G V E V++ D+ T R RGFGF+ F +  V + +  +
Sbjct:     7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-M 65

Query:   311 HFHMIKNKKVECKKAQPKEAVQ 332
               H+I  + VE KKA P++  Q
Sbjct:    66 DKHIIDGRTVEAKKAVPRDDQQ 87


>UNIPROTKB|E1BEG2 [details] [associations]
            symbol:HNRNPA3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:DAAA02004160
            IPI:IPI00690667 Ensembl:ENSBTAT00000028757 Uniprot:E1BEG2
        Length = 380

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 78/202 (38%), Positives = 121/202 (59%)

Query:   143 GKSSGDSGRST----PTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIM 194
             G+   DSGR        G DP       KLF+GGLS++T+ + LRE+F  +G +TD ++M
Sbjct:     8 GRPQPDSGRRRRRRGAQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVM 67

Query:   195 KDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKK 251
             +DP T+RSRGFGF+T++  E V+  +    H +DG+ ++PK A  +    +P      KK
Sbjct:    68 RDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKK 127

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
             IFVGG+ +DT    ++ YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    
Sbjct:   128 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187

Query:   312 FHMIKNKKVECKKAQPKEAVQA 333
             +H I     E KKA  K+ +Q+
Sbjct:   188 YHTINGHNCEVKKALSKQEMQS 209


>UNIPROTKB|E2RFV7 [details] [associations]
            symbol:HNRNPA3 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K12741 GeneTree:ENSGT00700000104376 CTD:220988 OMA:QGHDPKE
            EMBL:AAEX03017802 RefSeq:XP_543761.2 ProteinModelPortal:E2RFV7
            Ensembl:ENSCAFT00000021410 GeneID:608074 KEGG:cfa:608074
            Uniprot:E2RFV7
        Length = 378

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 78/202 (38%), Positives = 121/202 (59%)

Query:   143 GKSSGDSGRST----PTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIM 194
             G+   DSGR        G DP       KLF+GGLS++T+ + LRE+F  +G +TD ++M
Sbjct:     8 GRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVM 67

Query:   195 KDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKK 251
             +DP T+RSRGFGF+T++  E V+  +    H +DG+ ++PK A  +    +P      KK
Sbjct:    68 RDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKK 127

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
             IFVGG+ +DT    ++ YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    
Sbjct:   128 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187

Query:   312 FHMIKNKKVECKKAQPKEAVQA 333
             +H I     E KKA  K+ +Q+
Sbjct:   188 YHTINGHNCEVKKALSKQEMQS 209


>UNIPROTKB|P51991 [details] [associations]
            symbol:HNRNPA3 "Heterogeneous nuclear ribonucleoprotein A3"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC;TAS] [GO:0030529
            "ribonucleoprotein complex" evidence=TAS] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
            "gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
            Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471058
            GO:GO:0000398 GO:GO:0071013 eggNOG:COG0724 HOVERGEN:HBG002295
            EMBL:AC079305 HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF
            HPA:HPA001666 EMBL:AY363225 EMBL:BC112027 EMBL:BC113470
            IPI:IPI00419373 IPI:IPI00455134 PIR:I52962 RefSeq:NP_919223.1
            UniGene:Hs.516539 ProteinModelPortal:P51991 SMR:P51991
            IntAct:P51991 MINT:MINT-4999802 STRING:P51991 PhosphoSite:P51991
            DMDM:51338779 PaxDb:P51991 PRIDE:P51991 Ensembl:ENST00000392524
            Ensembl:ENST00000411529 Ensembl:ENST00000435711 GeneID:220988
            KEGG:hsa:220988 UCSC:uc002ulb.1 CTD:220988 GeneCards:GC02P178077
            HGNC:HGNC:24941 MIM:605372 neXtProt:NX_P51991 PharmGKB:PA162391169
            InParanoid:P51991 OMA:QGHDPKE PhylomeDB:P51991 ChiTaRS:HNRNPA3
            GenomeRNAi:220988 NextBio:91133 PMAP-CutDB:P51991
            ArrayExpress:P51991 Bgee:P51991 CleanEx:HS_HNRNPA3
            Genevestigator:P51991 GermOnline:ENSG00000170144 Uniprot:P51991
        Length = 378

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 78/202 (38%), Positives = 121/202 (59%)

Query:   143 GKSSGDSGRST----PTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIM 194
             G+   DSGR        G DP       KLF+GGLS++T+ + LRE+F  +G +TD ++M
Sbjct:     8 GRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVM 67

Query:   195 KDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKK 251
             +DP T+RSRGFGF+T++  E V+  +    H +DG+ ++PK A  +    +P      KK
Sbjct:    68 RDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKK 127

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
             IFVGG+ +DT    ++ YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    
Sbjct:   128 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187

Query:   312 FHMIKNKKVECKKAQPKEAVQA 333
             +H I     E KKA  K+ +Q+
Sbjct:   188 YHTINGHNCEVKKALSKQEMQS 209


>UNIPROTKB|F2Z5B4 [details] [associations]
            symbol:HNRNPA3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013 KO:K12741
            GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:CU862048
            RefSeq:XP_003133549.1 ProteinModelPortal:F2Z5B4 SMR:F2Z5B4
            Ensembl:ENSSSCT00000017409 GeneID:100516520 KEGG:ssc:100516520
            Uniprot:F2Z5B4
        Length = 379

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 78/202 (38%), Positives = 121/202 (59%)

Query:   143 GKSSGDSGRST----PTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIM 194
             G+   DSGR        G DP       KLF+GGLS++T+ + LRE+F  +G +TD ++M
Sbjct:     8 GRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVM 67

Query:   195 KDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKK 251
             +DP T+RSRGFGF+T++  E V+  +    H +DG+ ++PK A  +    +P      KK
Sbjct:    68 RDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKK 127

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
             IFVGG+ +DT    ++ YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    
Sbjct:   128 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187

Query:   312 FHMIKNKKVECKKAQPKEAVQA 333
             +H I     E KKA  K+ +Q+
Sbjct:   188 YHTINGHNCEVKKALSKQEMQS 209


>RGD|2321074 [details] [associations]
            symbol:LOC100360986 "mCG1035404-like" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:2321074 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 IPI:IPI00559028
            PRIDE:D4ACQ0 Ensembl:ENSRNOT00000002122 UCSC:RGD:2321074
            ArrayExpress:D4ACQ0 Uniprot:D4ACQ0
        Length = 320

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 78/202 (38%), Positives = 121/202 (59%)

Query:   143 GKSSGDSGRST----PTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIM 194
             G+   DSGR        G DP       KLF+GGLS++T+ + LRE+F  +G +TD ++M
Sbjct:     8 GRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVM 67

Query:   195 KDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKK 251
             +DP T+RSRGFGF+T++  E V+  +    H +DG+ ++PK A  +    +P      KK
Sbjct:    68 RDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKK 127

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
             IFVGG+ +DT    ++ YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    
Sbjct:   128 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187

Query:   312 FHMIKNKKVECKKAQPKEAVQA 333
             +H I     E KKA  K+ +Q+
Sbjct:   188 YHTINGHNCEVKKALSKQEMQS 209


>RGD|727807 [details] [associations]
            symbol:Hnrnpa3 "heterogeneous nuclear ribonucleoprotein A3"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IMP] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005681 "spliceosomal complex"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0035770
            "ribonucleoprotein granule" evidence=IDA] [GO:0043005 "neuron
            projection" evidence=IDA] [GO:0051028 "mRNA transport"
            evidence=IMP] [GO:0051033 "RNA transmembrane transporter activity"
            evidence=IMP] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:727807 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043005 GO:GO:0005681
            GO:GO:0051028 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF CTD:220988
            EMBL:AY363226 EMBL:AY363227 EMBL:BC081878 IPI:IPI00382376
            IPI:IPI00464458 RefSeq:NP_001104764.1 RefSeq:NP_001104765.1
            RefSeq:NP_937765.1 UniGene:Rn.107690 UniGene:Rn.99947
            ProteinModelPortal:Q6URK4 SMR:Q6URK4 STRING:Q6URK4
            PhosphoSite:Q6URK4 PRIDE:Q6URK4 GeneID:362152 KEGG:rno:362152
            UCSC:RGD:727807 InParanoid:Q6URK4 NextBio:678824
            ArrayExpress:Q6URK4 Genevestigator:Q6URK4 GO:GO:0035770
            GO:GO:0051033 Uniprot:Q6URK4
        Length = 379

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 78/202 (38%), Positives = 121/202 (59%)

Query:   143 GKSSGDSGRST----PTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIM 194
             G+   DSGR        G DP       KLF+GGLS++T+ + LRE+F  +G +TD ++M
Sbjct:     8 GRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVM 67

Query:   195 KDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKK 251
             +DP T+RSRGFGF+T++  E V+  +    H +DG+ ++PK A  +    +P      KK
Sbjct:    68 RDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKK 127

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
             IFVGG+ +DT    ++ YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    
Sbjct:   128 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187

Query:   312 FHMIKNKKVECKKAQPKEAVQA 333
             +H I     E KKA  K+ +Q+
Sbjct:   188 YHTINGHNCEVKKALSKQEMQS 209


>MGI|MGI:1924384 [details] [associations]
            symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006954 "inflammatory response" evidence=IDA]
            [GO:0017091 "AU-rich element binding" evidence=ISO;IDA] [GO:0019901
            "protein kinase binding" evidence=ISO] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0032496 "response to
            lipopolysaccharide" evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA
            stabilization" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1924384
            GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0030529 eggNOG:COG0724
            HSSP:P09651 GO:GO:0070935 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 CTD:10949
            KO:K12894 OrthoDB:EOG4W6NX4 EMBL:AK019388 EMBL:AC165251
            IPI:IPI00109813 RefSeq:NP_084148.1 UniGene:Mm.490274
            ProteinModelPortal:Q9CX86 SMR:Q9CX86 STRING:Q9CX86
            PhosphoSite:Q9CX86 PaxDb:Q9CX86 PRIDE:Q9CX86
            Ensembl:ENSMUST00000007980 GeneID:77134 KEGG:mmu:77134
            UCSC:uc007qtf.2 InParanoid:Q9CX86 OMA:EDNQHAL ChiTaRS:HNRNPA0
            NextBio:346544 Bgee:Q9CX86 Genevestigator:Q9CX86 Uniprot:Q9CX86
        Length = 305

 Score = 352 (129.0 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL+ QTS   LR +F  FG +TD +++ +P T+RSR FGF+T++  E  +  +  
Sbjct:     8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG  ++ K A  +    RP    + KK+FVGG+  D +  ++  +FSQFG VE+ 
Sbjct:    68 SPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKA 127

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
              ++ D+Q+ + RGFGFV F++ +  D    + FH I+  +VE KKA PKE + A
Sbjct:   128 EIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIHA 181

 Score = 152 (58.6 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
 Identities = 40/123 (32%), Positives = 56/123 (45%)

Query:   134 EAHQLVLVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLI 193
             + + + L    S  DS R  P G      KLFVGGL    +   L E+F  FGAV    I
Sbjct:    73 DGNTVELKRAVSREDSAR--P-GAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEI 129

Query:   194 MKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIF 253
             + D  + + RGFGF+ F   +  +K   V  H + G +++ K A PK     G    +  
Sbjct:   130 IADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIHAGGGGARAA 189

Query:   254 VGG 256
              GG
Sbjct:   190 RGG 192

 Score = 44 (20.5 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query:   123 KLFVGGLNV 131
             KLF+GGLNV
Sbjct:     8 KLFIGGLNV 16


>ZFIN|ZDB-GENE-030131-618 [details] [associations]
            symbol:hnrnpa0l "heterogeneous nuclear
            ribonucleoprotein A0, like" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-618
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 EMBL:BX088707
            EMBL:BC050513 IPI:IPI00489762 UniGene:Dr.75590 UniGene:Dr.79301
            SMR:Q7ZU48 STRING:Q7ZU48 Ensembl:ENSDART00000052511
            InParanoid:Q7ZU48 OMA:ICRRIAP Uniprot:Q7ZU48
        Length = 302

 Score = 351 (128.6 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
 Identities = 72/175 (41%), Positives = 108/175 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTD-VLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
             KLFVGGL+ QT+ E LR +F  +G +TD V++M  P+ QRSR FGF+T++  E  +  + 
Sbjct:     7 KLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPL-QRSRCFGFVTYSSTEEADAAMS 65

Query:   222 VPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEE 278
                H +DG  +D K A  +    +P++  + KKIFVGG+  D   E ++ YFSQFG +E+
Sbjct:    66 ARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIEK 125

Query:   279 TVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
               ++ D+ T + RGFGFV F++ +  D    + FH I   KVE KKA  K+ +Q+
Sbjct:   126 AQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVEVKKALTKQEMQS 180

 Score = 159 (61.0 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 34/102 (33%), Positives = 62/102 (60%)

Query:   247 NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDH 306
             N+  K+FVGG++  T+ E ++A+F Q+G++ + V++M+Q  +R R FGFVT+ + E  D 
Sbjct:     3 NQLCKLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSTEEADA 62

Query:   307 ICEIHFHMIKNKKVECKKAQPKE-AVQANLLVG-KRVILGPL 346
                   H++    V+ K+A  +E A +  +L   K++ +G L
Sbjct:    63 AMSARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGL 104

 Score = 45 (20.9 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
 Identities = 9/9 (100%), Positives = 9/9 (100%)

Query:   123 KLFVGGLNV 131
             KLFVGGLNV
Sbjct:     7 KLFVGGLNV 15


>CGD|CAL0003460 [details] [associations]
            symbol:orf19.5989 species:5476 "Candida albicans" [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0005849 "mRNA
            cleavage factor complex" evidence=IEA] [GO:0006379 "mRNA cleavage"
            evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
            [GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            CGD:CAL0003460 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG0724 KO:K14411
            RefSeq:XP_723052.1 RefSeq:XP_723199.1 ProteinModelPortal:Q5ANB5
            SMR:Q5ANB5 STRING:Q5ANB5 GeneID:3635162 GeneID:3635323
            KEGG:cal:CaO19.13410 KEGG:cal:CaO19.5989 Uniprot:Q5ANB5
        Length = 475

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 77/169 (45%), Positives = 109/169 (64%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             S K F+GGLSW T+ E L  +F  +G + D  IMKD  T RSRGFGF+TF + ++V+ +L
Sbjct:   161 SRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALL 220

Query:   221 KVPIHTLDGKKIDPKHATPK-NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
             K   H LDGK IDPK A  K ++ K+G    KIFVGG+    + EE   +FSQFGK+ + 
Sbjct:   221 K-DRHVLDGKLIDPKRAISKEDQEKVG----KIFVGGIDPMVTEEEFDNFFSQFGKIIDC 275

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
              +++D+ T R RGFGFVT+++   VD +C   +  +K K +E K+A P+
Sbjct:   276 QLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPR 324

 Score = 168 (64.2 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 37/103 (35%), Positives = 55/103 (53%)

Query:   140 LVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPIT 199
             +++GK   D  R+    D     K+FVGG+    + E+   +F  FG + D  +M D  T
Sbjct:   225 VLDGKLI-DPKRAISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDT 283

Query:   200 QRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNR 242
              RSRGFGF+T+  P  V+KV      TL GK ++ K A P+ +
Sbjct:   284 GRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPRGQ 326

 Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 30/84 (35%), Positives = 54/84 (64%)

Query:   246 GNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVD 305
             G  ++K F+GG+S DT+ E + ++F ++G + +  ++ D  T R RGFGF+TFE+ + VD
Sbjct:   158 GGPSRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVD 217

Query:   306 HICEIHFHMIKNKKVECKKAQPKE 329
              + +   H++  K ++ K+A  KE
Sbjct:   218 ALLKDR-HVLDGKLIDPKRAISKE 240


>FB|FBgn0263396 [details] [associations]
            symbol:sqd "squid" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=IC;IDA;TAS] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0008069 "dorsal/ventral axis specification, ovarian follicular
            epithelium" evidence=IMP] [GO:0007297 "ovarian follicle cell
            migration" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP;TAS]
            [GO:0008298 "intracellular mRNA localization" evidence=NAS;TAS]
            [GO:0017148 "negative regulation of translation" evidence=TAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IMP;TAS] [GO:0006405
            "RNA export from nucleus" evidence=TAS] [GO:0030529
            "ribonucleoprotein complex" evidence=ISS;NAS] [GO:0003729 "mRNA
            binding" evidence=ISS;NAS] [GO:0035062 "omega speckle"
            evidence=IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=TAS]
            [GO:0006406 "mRNA export from nucleus" evidence=NAS] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0019094 "pole plasm mRNA localization"
            evidence=IMP] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IMP] [GO:0030720 "oocyte localization
            involved in germarium-derived egg chamber formation" evidence=IMP]
            [GO:0016325 "oocyte microtubule cytoskeleton organization"
            evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
            evidence=IMP] [GO:0007314 "oocyte anterior/posterior axis
            specification" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
            localization" evidence=IEP] [GO:0071011 "precatalytic spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0033119 "negative regulation of RNA splicing"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0000785 GO:GO:0003730 GO:GO:0006406 GO:GO:0033119
            GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0030720
            GO:GO:0007297 eggNOG:COG0724 GO:GO:0045451 GO:GO:0005703
            GO:GO:0000381 GO:GO:0016325 GO:GO:0008069
            GeneTree:ENSGT00700000104255 GO:GO:0035062 EMBL:X62637 EMBL:X62638
            EMBL:S61875 EMBL:S62100 EMBL:AY118501 EMBL:BT001384 EMBL:BT003283
            EMBL:BT023832 EMBL:S51693 PIR:A47369 PIR:B41732 PIR:B47369
            PIR:C48110 RefSeq:NP_001247088.1 RefSeq:NP_652209.1
            RefSeq:NP_731825.1 RefSeq:NP_731826.1 RefSeq:NP_996203.1
            UniGene:Dm.7189 ProteinModelPortal:Q08473 SMR:Q08473 IntAct:Q08473
            MINT:MINT-847475 STRING:Q08473 PaxDb:Q08473
            EnsemblMetazoa:FBtr0082855 GeneID:41666 KEGG:dme:Dmel_CG16901
            CTD:41666 FlyBase:FBgn0263396 InParanoid:Q08473 KO:K03102
            OMA:GDIDSIN OrthoDB:EOG43BK52 PhylomeDB:Q08473 ChiTaRS:sqd
            GenomeRNAi:41666 NextBio:824926 Bgee:Q08473 GermOnline:CG16901
            Uniprot:Q08473
        Length = 344

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 84/206 (40%), Positives = 120/206 (58%)

Query:   142 NGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQR 201
             NG S   S  S    DD    KLFVGGLSW+T+ ++LR++FG +G +  + +  DP T R
Sbjct:    39 NGSSDNQSAASGQRDDD---RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGR 95

Query:   202 SRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDT 261
             SRGF FI F   E ++KV     H ++ KK+DPK A  ++    G    KIFVGG++ + 
Sbjct:    96 SRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARH----G----KIFVGGLTTEI 147

Query:   262 SAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVE 321
             S EE+K YF QFG + E  M  D+Q  + +GF F+TF++E+VV  + +     I  K+V+
Sbjct:   148 SDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVD 207

Query:   322 CKKAQPKEAVQANLLVGKRVILGPLG 347
              K+A PK   Q  ++ G R   GP G
Sbjct:   208 VKRATPKPENQ--MMGGMRG--GPRG 229


>UNIPROTKB|Q5ZME1 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0043047 "single-stranded telomeric DNA binding"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0097157 GO:GO:0048025 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF CTD:3181
            GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS EMBL:AC140791
            EMBL:AJ719443 IPI:IPI00651336 RefSeq:NP_001026156.1
            UniGene:Gga.22131 SMR:Q5ZME1 IntAct:Q5ZME1 STRING:Q5ZME1
            Ensembl:ENSGALT00000017975 GeneID:420627 KEGG:gga:420627
            InParanoid:Q5ZME1 NextBio:20823513 Uniprot:Q5ZME1
        Length = 349

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 67/173 (38%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    18 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 77

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               HT+DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    78 RPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 137

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   138 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 190

 Score = 164 (62.8 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 32/80 (40%), Positives = 51/80 (63%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF +   VD    
Sbjct:    17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 76

Query:   310 IHFHMIKNKKVECKKAQPKE 329
                H I  + VE K+A  +E
Sbjct:    77 ARPHTIDGRVVEPKRAVARE 96

 Score = 149 (57.5 bits), Expect = 7.7e-08, P = 7.7e-08
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:    97 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 153

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   154 VTFDDHDPVDKIVLQKYHTINGHNAEVRKA 183


>UNIPROTKB|Q9TTV2 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9490 "Saguinus oedipus" [GO:0030529
            "ribonucleoprotein complex" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
            GO:GO:0030529 HOVERGEN:HBG002295 HSSP:P22626 EMBL:AF192348
            ProteinModelPortal:Q9TTV2 SMR:Q9TTV2 Uniprot:Q9TTV2
        Length = 341

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 67/173 (38%), Positives = 112/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS+QT+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    10 KLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF+++GK++  
Sbjct:    70 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTI 129

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   130 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 182

 Score = 162 (62.1 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 32/80 (40%), Positives = 50/80 (62%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+S  T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF +   VD    
Sbjct:     9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68

Query:   310 IHFHMIKNKKVECKKAQPKE 329
                H I  + VE K+A  +E
Sbjct:    69 ARPHSIDGRVVEPKRAVARE 88

 Score = 151 (58.2 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:    89 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGF 145

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   146 VTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175


>TAIR|locus:2129590 [details] [associations]
            symbol:AT4G14300 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002687 GO:GO:0000166
            Gene3D:3.30.70.330 EMBL:Z97335 EMBL:AL161538 GO:GO:0003676
            GO:GO:0030529 eggNOG:COG0724 HOGENOM:HOG000234441 KO:K14411
            HSSP:Q61474 EMBL:AJ303457 EMBL:AK226323 IPI:IPI00517003 PIR:G71404
            RefSeq:NP_193166.2 UniGene:At.33295 ProteinModelPortal:Q8W034
            SMR:Q8W034 IntAct:Q8W034 MINT:MINT-1163850 STRING:Q8W034
            PaxDb:O23288 PRIDE:Q8W034 EnsemblPlants:AT4G14300.1 GeneID:827071
            KEGG:ath:AT4G14300 TAIR:At4g14300 InParanoid:Q8W034 OMA:YGATNIP
            PhylomeDB:Q8W034 ProtClustDB:CLSN2913105 Genevestigator:Q8W034
            Uniprot:Q8W034
        Length = 411

 Score = 354 (129.7 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
 Identities = 76/189 (40%), Positives = 116/189 (61%)

Query:   158 DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVE 217
             D    KLFVGG+SW+T  +KLRE+F  +G V+  ++M+D +T R RGFGF+ F++P  ++
Sbjct:     2 DSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLD 61

Query:   218 KVL--KVPIHT--LDGKKI---DPKHATPK------NRPKIG---NRTKKIFVGGVSQDT 261
             +VL  K  I T  +D K+    + +  + +      +R   G   N+TKKIFVGG+    
Sbjct:    62 RVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTL 121

Query:   262 SAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVE 321
             + EE + YF  +G V +  ++ DQ T R RGFGFV+F++E+ VD +    FH +  K+VE
Sbjct:   122 TDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVE 181

Query:   322 CKKAQPKEA 330
              K+A PK+A
Sbjct:   182 VKRALPKDA 190

 Score = 165 (63.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
 Identities = 29/84 (34%), Positives = 55/84 (65%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+FVGG+S +T  ++++ +F+ +G+V + +++ D+ T R RGFGFV F +  V+D + + 
Sbjct:     7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ- 65

Query:   311 HFHMIKNKKVECKKAQPKEAVQAN 334
               H I  ++V+ K+A  +E  Q +
Sbjct:    66 EKHSIDTREVDVKRAMSREEQQVS 89

 Score = 38 (18.4 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query:   118 DPTSAKLFVGGLN 130
             D    KLFVGG++
Sbjct:     2 DSDQGKLFVGGIS 14


>UNIPROTKB|F1NBB6 [details] [associations]
            symbol:LOC100859627 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:AADN02020007
            EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
            EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
            IPI:IPI00818847 Ensembl:ENSGALT00000029498 Uniprot:F1NBB6
        Length = 310

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 70/173 (40%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ + LRE+F  +G +TD ++M+DP T+RSRGFGF+T++  E V+  +  
Sbjct:    22 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    +P      KKIFVGG+ +DT    ++ YF ++GK+E  
Sbjct:    82 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGF FVTF++ + VD I    +H I     E KKA  K+ +Q
Sbjct:   142 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQ 194

 Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 38/107 (35%), Positives = 67/107 (62%)

Query:   241 NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEN 300
             + PK   + +K+F+GG+S +T+ + ++ +F ++G + + V++ D QTKR RGFGFVT+  
Sbjct:    12 HEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSC 71

Query:   301 EEVVDHICEIHFHMIKNKKVECKKAQPKE-AVQ--ANLLVGKRVILG 344
              E VD       H +  + VE K+A  +E +V+  A+L V K++ +G
Sbjct:    72 VEEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTV-KKIFVG 117

 Score = 161 (61.7 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 32/89 (35%), Positives = 50/89 (56%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LREYF  +G +  + +M+D  + + RGF F+TF 
Sbjct:   102 SVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 161

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K++    HT++G   + K A  K
Sbjct:   162 DHDTVDKIVVQKYHTINGHNCEVKKALSK 190


>UNIPROTKB|F1P5I0 [details] [associations]
            symbol:LOC100859627 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:AADN02020007
            EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
            EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
            IPI:IPI00971390 Ensembl:ENSGALT00000015053 Uniprot:F1P5I0
        Length = 288

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 70/173 (40%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ + LRE+F  +G +TD ++M+DP T+RSRGFGF+T++  E V+  +  
Sbjct:    10 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSA 69

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    +P      KKIFVGG+ +DT    ++ YF ++GK+E  
Sbjct:    70 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETI 129

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGF FVTF++ + VD I    +H I     E KKA  K+ +Q
Sbjct:   130 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQ 182

 Score = 171 (65.3 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 38/105 (36%), Positives = 66/105 (62%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ + ++ +F ++G + + V++ D QTKR RGFGFVT+   E
Sbjct:     2 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 61

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKE-AVQ--ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E +V+  A+L V K++ +G
Sbjct:    62 EVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTV-KKIFVG 105

 Score = 161 (61.7 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 32/89 (35%), Positives = 50/89 (56%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LREYF  +G +  + +M+D  + + RGF F+TF 
Sbjct:    90 SVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 149

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K++    HT++G   + K A  K
Sbjct:   150 DHDTVDKIVVQKYHTINGHNCEVKKALSK 178


>TAIR|locus:2007903 [details] [associations]
            symbol:AT1G17640 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K12741 OMA:GHQTGYK IPI:IPI00519530 RefSeq:NP_173208.1
            UniGene:At.51654 ProteinModelPortal:F4I906 SMR:F4I906 PRIDE:F4I906
            EnsemblPlants:AT1G17640.1 GeneID:838341 KEGG:ath:AT1G17640
            Uniprot:F4I906
        Length = 369

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 82/196 (41%), Positives = 116/196 (59%)

Query:   144 KSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSR 203
             K S D   S+ +   P   KLFVGG+SW+T++E    YFG FG V D +IM D IT   R
Sbjct:    50 KHSVDHRHSSSSMSSP--GKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPR 107

Query:   204 GFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRP----KIGNRTKKIFVGGVSQ 259
             GFGF+TFA+    EKVL+   H +D +K+D K   P+       K  ++T+KIFVGG+  
Sbjct:   108 GFGFVTFADSAVAEKVLEED-HVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPP 166

Query:   260 DTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHI-CEIHFHMIKNK 318
                 +E+K YF  +G + E  ++ D  T R RGFGFVTF+ E+ VD +  +   H + +K
Sbjct:   167 LLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDK 226

Query:   319 KVECKKAQPKEAVQAN 334
             +VE K+A+PK   + N
Sbjct:   227 QVEIKRAEPKRTGRDN 242


>ZFIN|ZDB-GENE-040426-1546 [details] [associations]
            symbol:zgc:66127 "zgc:66127" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-1546 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GeneTree:ENSGT00700000104376 EMBL:CABZ01055593
            EMBL:CABZ01000532 EMBL:CABZ01000533 EMBL:CABZ01000534
            EMBL:CABZ01000536 EMBL:CABZ01000539 EMBL:CABZ01000540
            EMBL:CABZ01085064 EMBL:CABZ01085065 EMBL:CABZ01085066
            EMBL:CABZ01085067 EMBL:CABZ01085068 EMBL:CABZ01088246
            EMBL:CABZ01088247 EMBL:CABZ01088248 EMBL:CABZ01088249
            EMBL:CABZ01088250 EMBL:CABZ01088251 EMBL:CABZ01092715
            EMBL:CABZ01092716 EMBL:CABZ01092717 EMBL:CABZ01092718
            IPI:IPI00971841 Ensembl:ENSDART00000082448 Bgee:E7FAB3
            Uniprot:E7FAB3
        Length = 411

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 65/170 (38%), Positives = 110/170 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T++    V+  +  
Sbjct:    39 KLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEVDAAMDA 98

Query:   223 PIHTLDGKKIDPKHATPK---NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +   ++P   +  KK+FVGG+ +DT  E ++ YF QFGK++E 
Sbjct:    99 RPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDEV 158

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ ++ + + RGF F+TF++ + VD I    +H +     E +KA  +E
Sbjct:   159 NIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNCEVRKALSRE 208

 Score = 171 (65.3 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 36/100 (36%), Positives = 57/100 (57%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S+  G   T  K+FVGG+   T  E LREYFG FG + +V IM +  + + RGF FITF 
Sbjct:   119 SSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEKNSDKRRGFAFITFD 178

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK---NRPKIGNR 248
             + + V++++    HT++G   + + A  +   NR  + +R
Sbjct:   179 DHDAVDRIVIQKYHTVNGHNCEVRKALSREEMNRVSMNSR 218

 Score = 169 (64.5 bits), Expect = 5.8e-10, P = 5.8e-10
 Identities = 32/87 (36%), Positives = 55/87 (63%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             P+   + +K+F+GG+S +T+ E ++A+F Q+G + + V++ D  TKR RGFGFVT+ +  
Sbjct:    31 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVG 90

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKE 329
              VD   +   H +  + VE K+A  +E
Sbjct:    91 EVDAAMDARPHKVDGRAVEPKRAVSRE 117


>UNIPROTKB|E7EWI9 [details] [associations]
            symbol:HNRNPA3 "Heterogeneous nuclear ribonucleoprotein A3"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC079305 HGNC:HGNC:24941
            ChiTaRS:HNRNPA3 IPI:IPI00939124 ProteinModelPortal:E7EWI9
            SMR:E7EWI9 Ensembl:ENST00000416446 ArrayExpress:E7EWI9 Bgee:E7EWI9
            Uniprot:E7EWI9
        Length = 322

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 73/185 (39%), Positives = 115/185 (62%)

Query:   156 GDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             G DP       KLF+GGLS++T+ + LRE+F  +G +TD ++M+DP T+RSRGFGF+T++
Sbjct:     3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYS 62

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKA 268
               E V+  +    H +DG+ ++PK A  +    +P      KKIFVGG+ +DT    ++ 
Sbjct:    63 CVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122

Query:   269 YFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    +H I     E KKA  K
Sbjct:   123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 182

Query:   329 EAVQA 333
             + +Q+
Sbjct:   183 QEMQS 187

 Score = 158 (60.7 bits), Expect = 5.7e-09, P = 5.7e-09
 Identities = 31/89 (34%), Positives = 50/89 (56%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LR+YF  +G +  + +M+D  + + RGF F+TF 
Sbjct:    94 SVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 153

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K++    HT++G   + K A  K
Sbjct:   154 DHDTVDKIVVQKYHTINGHNCEVKKALSK 182


>UNIPROTKB|F1LNG4 [details] [associations]
            symbol:Hnrnpa3 "Heterogeneous nuclear ribonucleoprotein A3"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00567786 Ensembl:ENSRNOT00000050735 ArrayExpress:F1LNG4
            Uniprot:F1LNG4
        Length = 357

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 73/185 (39%), Positives = 115/185 (62%)

Query:   156 GDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             G DP       KLF+GGLS++T+ + LRE+F  +G +TD ++M+DP T+RSRGFGF+T++
Sbjct:     3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYS 62

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKA 268
               E V+  +    H +DG+ ++PK A  +    +P      KKIFVGG+ +DT    ++ 
Sbjct:    63 CVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122

Query:   269 YFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    +H I     E KKA  K
Sbjct:   123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 182

Query:   329 EAVQA 333
             + +Q+
Sbjct:   183 QEMQS 187

 Score = 158 (60.7 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 31/89 (34%), Positives = 50/89 (56%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LR+YF  +G +  + +M+D  + + RGF F+TF 
Sbjct:    94 SVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 153

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K++    HT++G   + K A  K
Sbjct:   154 DHDTVDKIVVQKYHTINGHNCEVKKALSK 182


>UNIPROTKB|F1Q1K6 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 OMA:HYSARTS EMBL:AAEX03009384
            Ensembl:ENSCAFT00000004622 Uniprot:F1Q1K6
        Length = 353

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 66/173 (38%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194

 Score = 166 (63.5 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K R K   + +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF 
Sbjct:    13 KKREK--EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +   VD       H I  + VE K+A  +E
Sbjct:    71 SMAEVDAAMAARPHSIDGRVVEPKRAVARE 100

 Score = 149 (57.5 bits), Expect = 7.9e-08, P = 7.9e-08
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:   101 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 157

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   158 VTFDDHDPVDKIVLQKYHTINGHNAEVRKA 187


>UNIPROTKB|P22626 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0097157 "pre-mRNA intronic
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC;TAS] [GO:0006397 "mRNA processing" evidence=IDA]
            [GO:0050658 "RNA transport" evidence=IDA] [GO:0043047
            "single-stranded telomeric DNA binding" evidence=IDA] [GO:0003723
            "RNA binding" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
            "RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
            Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000398
            GO:GO:0071013 GO:GO:0050658 eggNOG:COG0724 GO:GO:0043047
            HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
            HPA:HPA001666 CTD:3181 KO:K13158 OMA:HYSARTS EMBL:M29064
            EMBL:M29065 EMBL:U09123 EMBL:U09120 EMBL:U09121 EMBL:U09122
            EMBL:D28877 EMBL:AK289429 IPI:IPI00396378 IPI:IPI00414696
            PIR:A56845 RefSeq:NP_002128.1 RefSeq:NP_112533.1 UniGene:Hs.487774
            PDB:1X4B PDBsum:1X4B ProteinModelPortal:P22626 SMR:P22626
            IntAct:P22626 MINT:MINT-4998934 STRING:P22626 PhosphoSite:P22626
            DMDM:133257 REPRODUCTION-2DPAGE:IPI00396378
            REPRODUCTION-2DPAGE:IPI00414696 REPRODUCTION-2DPAGE:P22626
            SWISS-2DPAGE:P22626 UCD-2DPAGE:P22626 PaxDb:P22626 PRIDE:P22626
            Ensembl:ENST00000354667 Ensembl:ENST00000356674
            Ensembl:ENST00000360787 GeneID:3181 KEGG:hsa:3181 UCSC:uc003sxr.4
            UCSC:uc003sxs.4 GeneCards:GC07M026229 HGNC:HGNC:5033 HPA:CAB012403
            MIM:600124 neXtProt:NX_P22626 PharmGKB:PA162391140 PhylomeDB:P22626
            ChiTaRS:HNRNPA2B1 EvolutionaryTrace:P22626 GenomeRNAi:3181
            NextBio:12622 PMAP-CutDB:P22626 Bgee:P22626 CleanEx:HS_HNRNPA2B1
            Genevestigator:P22626 GermOnline:ENSG00000122566 Uniprot:P22626
        Length = 353

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 66/173 (38%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194

 Score = 166 (63.5 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K R K   + +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF 
Sbjct:    13 KKREK--EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +   VD       H I  + VE K+A  +E
Sbjct:    71 SMAEVDAAMAARPHSIDGRVVEPKRAVARE 100

 Score = 149 (57.5 bits), Expect = 7.9e-08, P = 7.9e-08
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:   101 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 157

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   158 VTFDDHDPVDKIVLQKYHTINGHNAEVRKA 187


>MGI|MGI:104819 [details] [associations]
            symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein
            A2/B1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=ISO] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
            [GO:0043047 "single-stranded telomeric DNA binding" evidence=ISO]
            [GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
            evidence=IMP;IDA] [GO:0050658 "RNA transport" evidence=ISO]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
            [GO:0097157 "pre-mRNA intronic binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:104819 GO:GO:0005737 GO:GO:0005654
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0097157 GO:GO:0050658 GO:GO:0048025
            eggNOG:COG0724 GO:GO:0043047 HOVERGEN:HBG002295 OrthoDB:EOG4HQDKF
            CTD:3181 GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS
            ChiTaRS:HNRNPA2B1 EMBL:AF406651 EMBL:AF452567 EMBL:AF073990
            EMBL:AF073993 EMBL:AK089012 EMBL:AK137214 EMBL:BC059107
            EMBL:BC141253 IPI:IPI00405058 IPI:IPI00622847 IPI:IPI00828488
            RefSeq:NP_058086.2 RefSeq:NP_872591.1 RefSeq:XP_001473875.2
            UniGene:Mm.155896 ProteinModelPortal:O88569 SMR:O88569
            IntAct:O88569 STRING:O88569 PhosphoSite:O88569
            REPRODUCTION-2DPAGE:IPI00405058 REPRODUCTION-2DPAGE:O88569
            SWISS-2DPAGE:O88569 PaxDb:O88569 PRIDE:O88569
            Ensembl:ENSMUST00000069949 Ensembl:ENSMUST00000090002
            Ensembl:ENSMUST00000114459 GeneID:100045191 GeneID:53379
            KEGG:mmu:100045191 KEGG:mmu:53379 UCSC:uc009bxm.1 UCSC:uc009bxn.1
            NextBio:458663 Bgee:O88569 CleanEx:MM_HNRNPA2B1
            Genevestigator:O88569 GermOnline:ENSMUSG00000004980 Uniprot:O88569
        Length = 353

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 66/173 (38%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194

 Score = 166 (63.5 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K R K   + +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF 
Sbjct:    13 KKREK--EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +   VD       H I  + VE K+A  +E
Sbjct:    71 SMAEVDAAMAARPHSIDGRVVEPKRAVARE 100

 Score = 149 (57.5 bits), Expect = 7.9e-08, P = 7.9e-08
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:   101 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 157

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   158 VTFDDHDPVDKIVLQKYHTINGHNAEVRKA 187


>UNIPROTKB|F1LM82 [details] [associations]
            symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:1310403 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
            GeneTree:ENSGT00700000104376 IPI:IPI00923129
            Ensembl:ENSRNOT00000015325 ArrayExpress:F1LM82 Uniprot:F1LM82
        Length = 312

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 66/173 (38%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    21 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 80

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    81 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 140

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   141 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 193

 Score = 166 (63.5 bits), Expect = 6.0e-10, P = 6.0e-10
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K R K   + +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF 
Sbjct:    12 KKREK--EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 69

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +   VD       H I  + VE K+A  +E
Sbjct:    70 SMAEVDAAMAARPHSIDGRVVEPKRAVARE 99

 Score = 149 (57.5 bits), Expect = 5.8e-08, P = 5.8e-08
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:   100 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 156

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   157 VTFDDHDPVDKIVLQKYHTINGHNAEVRKA 186


>UNIPROTKB|F1LNF1 [details] [associations]
            symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1310403
            GO:GO:0005730 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0071013 GO:GO:0050658 GO:GO:0043047
            GeneTree:ENSGT00700000104376 OMA:HYSARTS IPI:IPI00867934
            ProteinModelPortal:F1LNF1 Ensembl:ENSRNOT00000015152
            ArrayExpress:F1LNF1 Uniprot:F1LNF1
        Length = 352

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 66/173 (38%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    21 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 80

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    81 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 140

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   141 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 193

 Score = 166 (63.5 bits), Expect = 8.7e-10, P = 8.7e-10
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K R K   + +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF 
Sbjct:    12 KKREK--EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 69

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +   VD       H I  + VE K+A  +E
Sbjct:    70 SMAEVDAAMAARPHSIDGRVVEPKRAVARE 99

 Score = 149 (57.5 bits), Expect = 7.9e-08, P = 7.9e-08
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:   100 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 156

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   157 VTFDDHDPVDKIVLQKYHTINGHNAEVRKA 186


>UNIPROTKB|Q2HJ60 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein
            complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0097157 "pre-mRNA
            intronic binding" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0043047 "single-stranded
            telomeric DNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005654
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0030529 GO:GO:0097157 GO:GO:0048025
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442
            OrthoDB:EOG4HQDKF EMBL:BC113298 IPI:IPI00695201
            RefSeq:NP_001039440.1 UniGene:Bt.48137 ProteinModelPortal:Q2HJ60
            SMR:Q2HJ60 STRING:Q2HJ60 PRIDE:Q2HJ60 Ensembl:ENSBTAT00000007527
            GeneID:507564 KEGG:bta:507564 CTD:3181 GeneTree:ENSGT00700000104376
            KO:K13158 OMA:HYSARTS NextBio:20868121 Uniprot:Q2HJ60
        Length = 341

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 66/173 (38%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    70 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 129

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   130 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 182

 Score = 164 (62.8 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 32/80 (40%), Positives = 51/80 (63%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF +   VD    
Sbjct:     9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68

Query:   310 IHFHMIKNKKVECKKAQPKE 329
                H I  + VE K+A  +E
Sbjct:    69 ARPHSIDGRVVEPKRAVARE 88

 Score = 149 (57.5 bits), Expect = 7.3e-08, P = 7.3e-08
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:    89 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 145

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   146 VTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175


>WB|WBGene00001999 [details] [associations]
            symbol:hrp-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0040015 "negative regulation of
            multicellular organism growth" evidence=IMP] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
            [GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0000781 "chromosome, telomeric region" evidence=IDA]
            [GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA
            binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0048477 GO:GO:0003723 GO:GO:0040035 GO:GO:0030529
            GO:GO:0040015 GO:GO:0000398 GO:GO:0000781 eggNOG:COG0724
            GO:GO:0031581 GeneTree:ENSGT00700000104255 KO:K12741 EMBL:D10877
            EMBL:FO081370 PIR:S35500 RefSeq:NP_001023199.1
            RefSeq:NP_001040944.1 RefSeq:NP_001040945.1 RefSeq:NP_500326.2
            UniGene:Cel.7537 ProteinModelPortal:Q22037 SMR:Q22037 IntAct:Q22037
            STRING:Q22037 PaxDb:Q22037 PRIDE:Q22037 EnsemblMetazoa:F42A6.7a.1
            EnsemblMetazoa:F42A6.7a.2 GeneID:177101 KEGG:cel:CELE_F42A6.7
            UCSC:F42A6.7a.1 CTD:177101 WormBase:F42A6.7a WormBase:F42A6.7b
            WormBase:F42A6.7c WormBase:F42A6.7d InParanoid:Q22037 OMA:YGGGWGQ
            NextBio:895332 Uniprot:Q22037
        Length = 346

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 66/170 (38%), Positives = 112/170 (65%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGL+  T+ + +RE++  FG +TD+++M+DP T+RSRGFGF+TF+    V+  +K 
Sbjct:    24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83

Query:   223 PIHTLDGKKIDPKHATP---KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DGK +DPK A P   KNR +    TK+++V GV +D + + +  YF+++G V ++
Sbjct:    84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              +++D+ T++ RGFGFVTF++ + VD       HM+   + + +K   K+
Sbjct:   144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKD 193

 Score = 176 (67.0 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 32/80 (40%), Positives = 55/80 (68%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +KIFVGG++ +T+ + ++ ++SQFG++ + +++ D  TKR RGFGFVTF  +  VD   +
Sbjct:    23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82

Query:   310 IHFHMIKNKKVECKKAQPKE 329
                H+I  K V+ K+A P++
Sbjct:    83 QRPHIIDGKTVDPKRAVPRD 102

 Score = 144 (55.7 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 38/129 (29%), Positives = 69/129 (53%)

Query:   140 LVNGKSSGDSGRSTPTGD------DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLI 193
             +++GK+  D  R+ P  D      + ++ +L+V G+    + + L EYF  +G VT   I
Sbjct:    87 IIDGKTV-DPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145

Query:   194 MKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIG--NRTKK 251
             + D  TQ+ RGFGF+TF + ++V++ +    H ++G + D +    K+       NR ++
Sbjct:   146 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRE 205

Query:   252 IFVGGVSQD 260
                GG S+D
Sbjct:   206 TR-GGRSRD 213


>RGD|1310403 [details] [associations]
            symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein A2/B1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA;ISO]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=ISO;ISS] [GO:0043047
            "single-stranded telomeric DNA binding" evidence=IEA;ISO]
            [GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
            evidence=IEA;ISO] [GO:0050658 "RNA transport" evidence=IEA;ISO]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
            [GO:0097157 "pre-mRNA intronic binding" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1310403 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0030529 GO:GO:0071013 GO:GO:0050658
            eggNOG:COG0724 GO:GO:0043047 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
            CTD:3181 KO:K13158 EMBL:AB006815 EMBL:AB006816 EMBL:AB006817
            EMBL:AB006818 IPI:IPI00212969 IPI:IPI00867934 IPI:IPI00923129
            IPI:IPI00923135 RefSeq:NP_001098083.1 UniGene:Rn.231911
            ProteinModelPortal:A7VJC2 SMR:A7VJC2 STRING:A7VJC2 PRIDE:A7VJC2
            GeneID:362361 KEGG:rno:362361 UCSC:RGD:1310403 HOVERGEN:HBG108415
            InParanoid:A7VJC2 NextBio:679650 ArrayExpress:A7VJC2
            Genevestigator:A7VJC2 Uniprot:A7VJC2
        Length = 353

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 66/173 (38%), Positives = 111/173 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   142 EIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKALSRQEMQ 194

 Score = 166 (63.5 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K R K   + +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF 
Sbjct:    13 KKREK--EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +   VD       H I  + VE K+A  +E
Sbjct:    71 SMAEVDAAMAARPHSIDGRVVEPKRAVARE 100

 Score = 148 (57.2 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 32/90 (35%), Positives = 51/90 (56%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:   101 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 157

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K+     HT++G   + + A
Sbjct:   158 VTFDDHDPVDKIFLQKYHTINGHNAEVRKA 187


>UNIPROTKB|F1M460 [details] [associations]
            symbol:F1M460 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00569538
            ProteinModelPortal:F1M460 Ensembl:ENSRNOT00000043465
            ArrayExpress:F1M460 Uniprot:F1M460
        Length = 224

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 69/174 (39%), Positives = 112/174 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KL +GGLS++T+ + LRE+F  +G +TD ++M+DP T+RSRGFGF+T++  E V+  +  
Sbjct:     9 KLLIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAVCA 68

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    +P      KKIFVGG+ +DT    ++ YF ++GK+E  
Sbjct:    69 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 128

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
              ++ D Q+ + RGF FVTF++ + VD I +  +H+I     E KKA  K+ +Q+
Sbjct:   129 EVMEDSQSGKKRGFAFVTFDDHDTVDKIVDQKYHIINGHNCEVKKALSKQEMQS 182

 Score = 154 (59.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 30/89 (33%), Positives = 49/89 (55%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LR+YF  +G +  + +M+D  + + RGF F+TF 
Sbjct:    89 SVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDSQSGKKRGFAFVTFD 148

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K++    H ++G   + K A  K
Sbjct:   149 DHDTVDKIVDQKYHIINGHNCEVKKALSK 177

 Score = 154 (59.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 35/98 (35%), Positives = 62/98 (63%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+ +GG+S +T+ + ++ +F ++G + + V++ D QTKR RGFGFVT+   E VD    
Sbjct:     8 RKLLIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAVC 67

Query:   310 IHFHMIKNKKVECKKAQPKE-AVQ--ANLLVGKRVILG 344
                H +  + VE K+A  +E +V+  A+L V K++ +G
Sbjct:    68 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTV-KKIFVG 104


>UNIPROTKB|F1Q3G7 [details] [associations]
            symbol:HNRNPA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013
            GO:GO:0051168 GO:GO:0000380 GO:GO:0051170
            GeneTree:ENSGT00550000074566 EMBL:AAEX03014967
            Ensembl:ENSCAFT00000010627 OMA:QAQQGGW Uniprot:F1Q3G7
        Length = 384

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 75/203 (36%), Positives = 119/203 (58%)

Query:   132 VREAHQLVLVNGKSSGDSGRSTPTGD-DPTSA-KLFVGGLSWQTSSEKLREYFGMFGAVT 189
             +R+A    L   K+     ++ P    +P    KLF+GGLS++T+ E LR +F  +G +T
Sbjct:     3 IRDAQGRSLPMPKARRRDKKARPKSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLT 62

Query:   190 DVLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIG 246
             D ++M+DP T+RSRGFGF+T+A  E V+  +    H +DG+ ++PK A  +    RP   
Sbjct:    63 DCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAH 122

Query:   247 NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDH 306
                KKIFVGG+ +DT    ++ YF Q+GK+E   ++ D+ + + RGF FVTF++ + VD 
Sbjct:   123 LTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDK 182

Query:   307 ICEIHFHMIKNKKVECKKAQPKE 329
             I    +H +     E +KA  K+
Sbjct:   183 IVIQKYHTVNGHNCEVRKALSKQ 205

 Score = 190 (71.9 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 43/113 (38%), Positives = 69/113 (61%)

Query:   235 KHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFG 294
             K A PK+ PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFG
Sbjct:    21 KKARPKS-PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFG 79

Query:   295 FVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
             FVT+   E VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    80 FVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 131


>ZFIN|ZDB-GENE-030912-14 [details] [associations]
            symbol:hnrnpa1 "heterogeneous nuclear
            ribonucleoprotein A1" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030912-14 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 eggNOG:COG0724
            HSSP:P09651 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
            OrthoDB:EOG4HQDKF CTD:3178 EMBL:BC044442 IPI:IPI00500189
            RefSeq:NP_956398.1 UniGene:Dr.67768 ProteinModelPortal:Q803K3
            SMR:Q803K3 STRING:Q803K3 PRIDE:Q803K3 GeneID:378453 KEGG:dre:378453
            InParanoid:Q803K3 NextBio:20813776 ArrayExpress:Q803K3 Bgee:Q803K3
            Uniprot:Q803K3
        Length = 422

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 74/191 (38%), Positives = 115/191 (60%)

Query:   150 GRSTPTGD--DPTSA-KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFG 206
             GR +  G   +P    KLF+GGLS++T+ + LR +F  +G +TD ++MKDP T+RSRGFG
Sbjct:    18 GRMSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFG 77

Query:   207 FITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK---NRPKIGNRTKKIFVGGVSQDTSA 263
             F+T++  + V   +    H +DG+ ++PK A  +   ++P      KKIFVGG+  DT  
Sbjct:    78 FVTYSSVDEVNASMDARPHKVDGRLVEPKRAVSREDSSKPFAHTTVKKIFVGGIKDDTEE 137

Query:   264 EEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECK 323
               ++ YF QFGK+E   +++D +T   RGF FVTF++ + VD I    +H +     E +
Sbjct:   138 NHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVR 197

Query:   324 KAQPKEAVQAN 334
             KA  K+ + AN
Sbjct:   198 KALSKQEM-AN 207


>TAIR|locus:2037633 [details] [associations]
            symbol:RBP1 "RNA-binding protein 1" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0008283 "cell proliferation" evidence=TAS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002684 GO:GO:0000166 GO:GO:0008283
            GO:GO:0003727 Gene3D:3.30.70.330 EMBL:AB077822 KO:K14411
            EMBL:AC082643 HSSP:Q61474 EMBL:AY054536 EMBL:AY064643
            IPI:IPI00548887 PIR:F96618 RefSeq:NP_176143.1 UniGene:At.17236
            ProteinModelPortal:Q9C652 SMR:Q9C652 IntAct:Q9C652 STRING:Q9C652
            PRIDE:Q9C652 EnsemblPlants:AT1G58470.1 GeneID:842216
            KEGG:ath:AT1G58470 TAIR:At1g58470 InParanoid:Q9C652 OMA:VTYDSED
            PhylomeDB:Q9C652 ProtClustDB:CLSN2914680 Genevestigator:Q9C652
            Uniprot:Q9C652
        Length = 360

 Score = 243 (90.6 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
 Identities = 43/90 (47%), Positives = 68/90 (75%)

Query:   245 IGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVV 304
             + +RTKKIFVGG+S +T+ EE K+YF +FG+  + V++ D  T R RGFGFVT+++E+ V
Sbjct:   115 VTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSV 174

Query:   305 DHICEIHFHMIKNKKVECKKAQPKEAVQAN 334
             + + + +FH + +K+VE K+A PKE +Q+N
Sbjct:   175 EVVMQSNFHELSDKRVEVKRAIPKEGIQSN 204

 Score = 199 (75.1 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 38/95 (40%), Positives = 57/95 (60%)

Query:   146 SGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGF 205
             +G     +  G    + K+FVGGLS  T+ E+ + YF  FG  TDV++M D +T R RGF
Sbjct:   104 NGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGF 163

Query:   206 GFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             GF+T+   ++VE V++   H L  K+++ K A PK
Sbjct:   164 GFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPK 198

 Score = 166 (63.5 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
 Identities = 33/79 (41%), Positives = 51/79 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGG++ +TS E L++YF  +GAV + ++ K+ +T + RGFGF+ FA    V K L+ 
Sbjct:     7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALR- 65

Query:   223 PIHTLDGKKIDPKHATPKN 241
               H + GK +D + A  K+
Sbjct:    66 DTHFILGKPVDVRKAIRKH 84

 Score = 160 (61.4 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 34/76 (44%), Positives = 52/76 (68%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENE-EVVDHICE 309
             K+FVGG++++TS E +K YFS++G V E V+  ++ T + RGFGFV F N+ +VV  + +
Sbjct:     7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66

Query:   310 IHFHMIKNKKVECKKA 325
              HF  I  K V+ +KA
Sbjct:    67 THF--ILGKPVDVRKA 80


>UNIPROTKB|P09867 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000380
            "alternative mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0051028 "mRNA transport" evidence=IEA] [GO:0005681
            "spliceosomal complex" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003697
            GO:GO:0030529 GO:GO:0051028 GO:GO:0071013 GO:GO:0051168
            eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
            HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
            Pfam:PF11627 EMBL:BC105413 IPI:IPI00692235 PIR:A27241
            RefSeq:NP_001039376.1 UniGene:Bt.88002 ProteinModelPortal:P09867
            SMR:P09867 STRING:P09867 PRIDE:P09867 Ensembl:ENSBTAT00000002033
            GeneID:505093 KEGG:bta:505093 CTD:3178 GeneTree:ENSGT00550000074566
            OMA:IEVEIMT BindingDB:P09867 NextBio:20866978 Uniprot:P09867
        Length = 320

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|E2QYP1 [details] [associations]
            symbol:HNRNPA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 EMBL:AAEX03014967
            ProteinModelPortal:E2QYP1 PRIDE:E2QYP1 Ensembl:ENSCAFT00000010628
            NextBio:20853043 Uniprot:E2QYP1
        Length = 373

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|F8VRQ1 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01021093 ProteinModelPortal:F8VRQ1 SMR:F8VRQ1 PRIDE:F8VRQ1
            Ensembl:ENST00000551133 ArrayExpress:F8VRQ1 Bgee:F8VRQ1
            Uniprot:F8VRQ1
        Length = 307

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|F8VSB5 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01022218 ProteinModelPortal:F8VSB5 SMR:F8VSB5 PRIDE:F8VSB5
            Ensembl:ENST00000552494 ArrayExpress:F8VSB5 Bgee:F8VSB5
            Uniprot:F8VSB5
        Length = 306

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|F8VXY0 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01022801 ProteinModelPortal:F8VXY0 SMR:F8VXY0 PRIDE:F8VXY0
            Ensembl:ENST00000547617 ArrayExpress:F8VXY0 Bgee:F8VXY0
            Uniprot:F8VXY0
        Length = 304

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|F8VZ49 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 EMBL:AC078778
            HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022460
            ProteinModelPortal:F8VZ49 SMR:F8VZ49 PRIDE:F8VZ49
            Ensembl:ENST00000548688 ArrayExpress:F8VZ49 Bgee:F8VZ49
            Uniprot:F8VZ49
        Length = 231

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    34 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 93

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    94 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 153

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   154 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 203

 Score = 179 (68.1 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:    26 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 85

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    86 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 129

 Score = 146 (56.5 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:   110 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 166

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   167 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 202


>UNIPROTKB|F8W1S7 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01021812 ProteinModelPortal:F8W1S7 SMR:F8W1S7 PRIDE:F8W1S7
            Ensembl:ENST00000552591 ArrayExpress:F8W1S7 Bgee:F8W1S7
            Uniprot:F8W1S7
        Length = 330

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|F8W6I7 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01021324 ProteinModelPortal:F8W6I7 SMR:F8W6I7 PRIDE:F8W6I7
            Ensembl:ENST00000330752 ArrayExpress:F8W6I7 Bgee:F8W6I7
            Uniprot:F8W6I7
        Length = 320

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|P09651 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
            [GO:0051028 "mRNA transport" evidence=IEA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC;TAS] [GO:0003723 "RNA binding" evidence=TAS]
            [GO:0006397 "mRNA processing" evidence=TAS] [GO:0003727
            "single-stranded RNA binding" evidence=IC] [GO:0005654
            "nucleoplasm" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006405 "RNA export from nucleus" evidence=IC]
            [GO:0051170 "nuclear import" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0051168 "nuclear
            export" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
            "gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
            filament cytoskeleton" evidence=IDA] Reactome:REACT_71
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0019048 GO:GO:0005654
            GO:GO:0005730 GO:GO:0000166 Reactome:REACT_1675 GO:GO:0003727
            Gene3D:3.30.70.330 EMBL:CH471054 GO:GO:0045111 GO:GO:0003697
            Pathway_Interaction_DB:ar_pathway GO:GO:0051028 GO:GO:0000398
            GO:GO:0071013 eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295
            GO:GO:0051170 GO:GO:0006405 HOGENOM:HOG000234442 KO:K12741
            OrthoDB:EOG4HQDKF CTD:3178 OMA:IEVEIMT EMBL:X12671 EMBL:X06747
            EMBL:X79536 EMBL:AK291113 EMBL:AC078778 EMBL:BC002355 EMBL:BC009600
            EMBL:BC012158 EMBL:BC033714 EMBL:BC052296 EMBL:BC070315
            EMBL:BC074502 EMBL:BC103707 EMBL:X04347 IPI:IPI00215965
            IPI:IPI00465365 IPI:IPI00797148 PIR:S02061 PIR:S12520
            RefSeq:NP_002127.1 RefSeq:NP_112420.1 UniGene:Hs.546261
            UniGene:Hs.655424 PDB:1HA1 PDB:1L3K PDB:1PGZ PDB:1PO6 PDB:1U1K
            PDB:1U1L PDB:1U1M PDB:1U1N PDB:1U1O PDB:1U1P PDB:1U1Q PDB:1U1R
            PDB:1UP1 PDB:2H4M PDB:2LYV PDB:2UP1 PDBsum:1HA1 PDBsum:1L3K
            PDBsum:1PGZ PDBsum:1PO6 PDBsum:1U1K PDBsum:1U1L PDBsum:1U1M
            PDBsum:1U1N PDBsum:1U1O PDBsum:1U1P PDBsum:1U1Q PDBsum:1U1R
            PDBsum:1UP1 PDBsum:2H4M PDBsum:2LYV PDBsum:2UP1 DisProt:DP00324
            ProteinModelPortal:P09651 SMR:P09651 DIP:DIP-29338N IntAct:P09651
            MINT:MINT-1035550 STRING:P09651 PhosphoSite:P09651 DMDM:288558857
            SWISS-2DPAGE:P09651 PaxDb:P09651 PRIDE:P09651
            Ensembl:ENST00000340913 Ensembl:ENST00000546500
            Ensembl:ENST00000547276 Ensembl:ENST00000547566 GeneID:3178
            KEGG:hsa:3178 UCSC:uc001sfl.3 UCSC:uc001sfm.3 UCSC:uc001sfn.3
            GeneCards:GC12P054674 H-InvDB:HIX0032087 H-InvDB:HIX0040127
            H-InvDB:HIX0202582 HGNC:HGNC:5031 HPA:CAB010894 HPA:HPA001666
            MIM:164017 neXtProt:NX_P09651 PharmGKB:PA162391113
            InParanoid:P09651 PhylomeDB:P09651 BindingDB:P09651
            ChEMBL:CHEMBL1955709 ChiTaRS:HNRNPA1 EvolutionaryTrace:P09651
            GenomeRNAi:3178 NextBio:12614 ArrayExpress:P09651 Bgee:P09651
            CleanEx:HS_HNRNPA1 Genevestigator:P09651 GermOnline:ENSG00000135486
            Uniprot:P09651
        Length = 372

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|Q06A94 [details] [associations]
            symbol:HNRNPA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0000380
            "alternative mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013 GO:GO:0051168
            eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
            HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
            Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 OMA:IEVEIMT
            EMBL:CU694683 EMBL:DQ972970 RefSeq:NP_001070686.1 UniGene:Ssc.49600
            SMR:Q06A94 Ensembl:ENSSSCT00000000309 GeneID:768103 KEGG:ssc:768103
            Uniprot:Q06A94
        Length = 320

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|A5A6H4 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9598 "Pan troglodytes" [GO:0030529 "ribonucleoprotein
            complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
            OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
            GeneTree:ENSGT00550000074566 OMA:IEVEIMT EMBL:AB222102
            EMBL:AL954201 RefSeq:NP_001091892.1 RefSeq:NP_001184040.1
            RefSeq:XP_003318234.1 RefSeq:XP_003954396.1 UniGene:Ptr.6288
            UniGene:Ptr.6435 ProteinModelPortal:A5A6H4 SMR:A5A6H4 PRIDE:A5A6H4
            Ensembl:ENSPTRT00000010845 GeneID:100615525 GeneID:739306
            GeneID:747284 KEGG:ptr:100615525 KEGG:ptr:739306 KEGG:ptr:747284
            CTD:739306 InParanoid:A5A6H4 BindingDB:A5A6H4 NextBio:20906554
            Uniprot:A5A6H4
        Length = 320

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>MGI|MGI:104820 [details] [associations]
            symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
            spliceosome" evidence=IDA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003697 "single-stranded DNA binding"
            evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
            [GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0051168 "nuclear export" evidence=ISO] [GO:0051170 "nuclear
            import" evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:104820 GO:GO:0005737
            GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681
            GO:GO:0003723 GO:GO:0003697 GO:GO:0051028 GO:GO:0051168
            eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
            HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
            Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 ChiTaRS:HNRNPA1
            EMBL:M99167 EMBL:D86729 EMBL:D86728 EMBL:AK007802 EMBL:AK088308
            EMBL:AK131999 EMBL:AK135391 EMBL:AK161730 EMBL:AK166901
            EMBL:AK167161 EMBL:AK167810 EMBL:AK167913 EMBL:AK168420
            EMBL:AK168531 EMBL:BC080675 EMBL:BC083136 IPI:IPI00553777
            IPI:IPI00817004 PIR:A44485 RefSeq:NP_034577.1 UniGene:Mm.237064
            UniGene:Mm.432031 ProteinModelPortal:P49312 SMR:P49312
            IntAct:P49312 STRING:P49312 PhosphoSite:P49312 PaxDb:P49312
            PRIDE:P49312 Ensembl:ENSMUST00000087351 GeneID:15382 KEGG:mmu:15382
            UCSC:uc007xxp.1 UCSC:uc012aah.1 BindingDB:P49312 NextBio:288050
            Bgee:P49312 CleanEx:MM_HNRNPA1 Genevestigator:P49312
            GermOnline:ENSMUSG00000058922 Uniprot:P49312
        Length = 320

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|D4ACJ7 [details] [associations]
            symbol:Hnrnpa1 "RCG50547, isoform CRA_b" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69234 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013 GO:GO:0051168
            EMBL:CH474035 GO:GO:0000380 GO:GO:0051170 OrthoDB:EOG4HQDKF
            OMA:IEVEIMT IPI:IPI00781944 SMR:D4ACJ7 Ensembl:ENSRNOT00000055284
            Uniprot:D4ACJ7
        Length = 373

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|D4ACJ8 [details] [associations]
            symbol:Hnrnpa1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 IPI:IPI00780243 Ensembl:ENSRNOT00000055282
            ArrayExpress:D4ACJ8 Uniprot:D4ACJ8
        Length = 268

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 6.2e-12, P = 6.2e-12
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 7.8e-08, P = 7.8e-08
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>UNIPROTKB|Q5I0M7 [details] [associations]
            symbol:Hnrnpa1 "Hnrpa1 protein" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CH474035 eggNOG:COG0724 HOVERGEN:HBG002295 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 IPI:IPI00421500
            UniGene:Rn.25771 EMBL:BC088150 SMR:Q5I0M7 STRING:Q5I0M7
            Ensembl:ENSRNOT00000055285 Genevestigator:Q5I0M7 Uniprot:Q5I0M7
        Length = 320

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183


>TAIR|locus:504955752 [details] [associations]
            symbol:AT3G13224 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441 HSSP:Q14103
            KO:K12741 OMA:HAINGHH EMBL:AP002042 EMBL:AY080630 EMBL:AY123003
            EMBL:AK221448 IPI:IPI00534312 RefSeq:NP_683559.2 UniGene:At.27259
            ProteinModelPortal:Q9LHL2 SMR:Q9LHL2 IntAct:Q9LHL2 PRIDE:Q9LHL2
            EnsemblPlants:AT3G13224.2 GeneID:820515 KEGG:ath:AT3G13224
            TAIR:At3g13224 InParanoid:Q9LHL2 PhylomeDB:Q9LHL2
            ProtClustDB:CLSN2918087 Genevestigator:Q9LHL2 Uniprot:Q9LHL2
        Length = 358

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 79/197 (40%), Positives = 127/197 (64%)

Query:   141 VNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQ 200
             +  +S  D+ +S   GD  +  K+F+GGL   T++    ++FG +G +TD +IM+D  T 
Sbjct:     1 MGSRSRNDNFQS---GDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTG 57

Query:   201 RSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK----NRPKIGNRTKKIFVGG 256
             + RGFGFITFA+P  V+KV++   H ++GK+++ K   PK    N+ K   +TKKIFVGG
Sbjct:    58 QPRGFGFITFADPSVVDKVIE-DTHVINGKQVEIKRTIPKGAGGNQSK-DIKTKKIFVGG 115

Query:   257 VSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIK 316
             +    + +E+K +F+++G V E  ++ D +T R RGFGFV F++EEVVD +     +MI 
Sbjct:   116 IPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLS-KGNMID 174

Query:   317 --NKKVECKKAQPKEAV 331
               + +VE KKA+PK+++
Sbjct:   175 MADTQVEIKKAEPKKSL 191

 Score = 147 (56.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
 Identities = 39/132 (29%), Positives = 69/132 (52%)

Query:   131 VVREAHQLVLVNGKSSGDSGRSTPTG------DDPTSAKLFVGGLSWQTSSEKLREYFGM 184
             V+ + H   ++NGK   +  R+ P G       D  + K+FVGG+    + ++L+++F  
Sbjct:    76 VIEDTH---VINGKQV-EIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAK 131

Query:   185 FGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVP--IHTLDG----KKIDPKHAT 238
             +G V +  +++D  T RSRGFGF+ F   E V+++L     I   D     KK +PK + 
Sbjct:   132 YGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKKSL 191

Query:   239 PKNRPKIGNRTK 250
              ++ P  G+  +
Sbjct:   192 NRSPPSYGSHPR 203

 Score = 45 (20.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query:   101 VNGKSSGDSGRSTPTGDDPTSAKLFVGGLN 130
             +  +S  D+ +S   GD  +  K+F+GGL+
Sbjct:     1 MGSRSRNDNFQS---GDGASPGKIFIGGLH 27


>ZFIN|ZDB-GENE-060224-1 [details] [associations]
            symbol:hnrnpa3 "heterogeneous nuclear
            ribonucleoprotein A3" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-060224-1 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104376 EMBL:CR848724 IPI:IPI00863016
            UniGene:Dr.85855 SMR:B0V1I7 Ensembl:ENSDART00000135273 OMA:IETIDIM
            Uniprot:B0V1I7
        Length = 312

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 67/175 (38%), Positives = 111/175 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ + LR +F  +G +TD ++M+DP  +RSRGFGF+T++    V+  +  
Sbjct:    14 KLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSVSEVDAAMTA 73

Query:   223 PIHTLDGKKIDPKHATPK---NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +   N+P      KKIFVGG+ +DT    ++ YF  +GK+E  
Sbjct:    74 RPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFECYGKIETI 133

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQAN 334
              ++ ++ T + RGF FVTF++ + VD I    +H I +   E +KA PK+ +Q++
Sbjct:   134 DIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKALPKQEMQSS 188

 Score = 164 (62.8 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 35/98 (35%), Positives = 60/98 (61%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+S +T+ + ++A+F Q+GK+ + V++ D   KR RGFGFVT+ +   VD    
Sbjct:    13 RKLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSVSEVDAAMT 72

Query:   310 IHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
                H +  + VE K+A  +E      A+L V K++ +G
Sbjct:    73 ARPHKVDGRVVEPKRAVSREDSNKPGAHLTV-KKIFVG 109

 Score = 156 (60.0 bits), Expect = 8.9e-09, P = 8.9e-09
 Identities = 31/89 (34%), Positives = 50/89 (56%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    +REYF  +G +  + IM++  T + RGF F+TF 
Sbjct:    94 SNKPGAHLTVKKIFVGGIKEDTEEYHIREYFECYGKIETIDIMEERSTGKKRGFCFVTFD 153

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K++    HT++    + + A PK
Sbjct:   154 DHDTVDKIVAQKYHTINSHNCEVRKALPK 182


>UNIPROTKB|F1RX74 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0050658 "RNA transport" evidence=IEA] [GO:0048025 "negative
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005730 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0071013 GO:GO:0050658
            GO:GO:0043047 GeneTree:ENSGT00700000104376 OMA:HYSARTS
            EMBL:CU469303 Ensembl:ENSSSCT00000017244 Uniprot:F1RX74
        Length = 353

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 66/173 (38%), Positives = 110/173 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GKV+  
Sbjct:    82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKVDTI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGF TF++ + VD I    +H I     E +KA  ++ +Q
Sbjct:   142 EIITDRQSGKKRGFGFFTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194

 Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
 Identities = 36/102 (35%), Positives = 59/102 (57%)

Query:   228 DGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQT 287
             + K ++      K R K   + +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +
Sbjct:     1 EAKTLETVPLERKKREK--EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPAS 58

Query:   288 KRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             KR RGFGFVTF +   VD       H I  + VE K+A  +E
Sbjct:    59 KRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVARE 100

 Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 33/90 (36%), Positives = 51/90 (56%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G V  + I+ D  + + RGFGF
Sbjct:   101 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKVDTIEIITDRQSGKKRGFGF 157

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
              TF + + V+K++    HT++G   + + A
Sbjct:   158 FTFDDHDPVDKIVLQKYHTINGHNAEVRKA 187


>UNIPROTKB|Q5RBU8 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9601 "Pongo abelii" [GO:0030529 "ribonucleoprotein
            complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0030529
            HOVERGEN:HBG002295 CTD:3181 KO:K13158 EMBL:CR858535
            RefSeq:NP_001127331.1 UniGene:Pab.19213 HSSP:P22626
            ProteinModelPortal:Q5RBU8 SMR:Q5RBU8 PRIDE:Q5RBU8 GeneID:100174392
            KEGG:pon:100174392 InParanoid:Q5RBU8 Uniprot:Q5RBU8
        Length = 353

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 66/173 (38%), Positives = 110/173 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    82 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I     H I     E +KA  ++ +Q
Sbjct:   142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKALSRQEMQ 194

 Score = 166 (63.5 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K R K   + +K+F+GG+S +T+ E ++ Y+ Q+GK+ + V++ D  +KR RGFGFVTF 
Sbjct:    13 KKREK--EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +   VD       H I  + VE K+A  +E
Sbjct:    71 SMAEVDAAMAARPHSIDGRVVEPKRAVARE 100

 Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:   101 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 157

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   158 VTFDDHDPVDKIVLQKHHTINGHNAEVRKA 187


>UNIPROTKB|Q28521 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9544 "Macaca mulatta" [GO:0030529 "ribonucleoprotein
            complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
            OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
            EMBL:M84334 PIR:S30192 RefSeq:NP_001036248.1 UniGene:Mmu.4980
            ProteinModelPortal:Q28521 SMR:Q28521 STRING:Q28521 PRIDE:Q28521
            GeneID:702977 KEGG:mcc:702977 InParanoid:Q28521 NextBio:19966247
            Uniprot:Q28521
        Length = 320

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 69/170 (40%), Positives = 106/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++   VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

 Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 KVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 144 (55.7 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF +  +V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHNSVDKIVIQKYHTVNGHNCEVRKALSK 183


>RGD|69234 [details] [associations]
            symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
           species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
           evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
           spliceosome" evidence=ISO] [GO:0003697 "single-stranded DNA binding"
           evidence=ISO;ISS;TAS] [GO:0003723 "RNA binding" evidence=TAS]
           [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
           evidence=ISO;ISS] [GO:0005681 "spliceosomal complex"
           evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
           "cytoplasm" evidence=ISO;ISS] [GO:0006397 "mRNA processing"
           evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISO]
           [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0030529
           "ribonucleoprotein complex" evidence=ISO;ISS] [GO:0045111
           "intermediate filament cytoskeleton" evidence=ISO] [GO:0051028 "mRNA
           transport" evidence=IEA] [GO:0051168 "nuclear export"
           evidence=ISO;ISS] [GO:0051170 "nuclear import" evidence=ISO;ISS]
           [GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
           InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
           SMART:SM00360 RGD:69234 GO:GO:0005737 GO:GO:0005654 GO:GO:0008380
           GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
           GO:GO:0003723 GO:GO:0003697 GO:GO:0016070 GO:GO:0051028
           GO:GO:0051168 eggNOG:COG0724 HOVERGEN:HBG002295 GO:GO:0051170
           HOGENOM:HOG000234442 KO:K12741 InterPro:IPR021662 Pfam:PF11627
           CTD:3178 EMBL:M12156 IPI:IPI00421500 PIR:A38304 RefSeq:NP_058944.1
           UniGene:Rn.25771 ProteinModelPortal:P04256 SMR:P04256 IntAct:P04256
           STRING:P04256 PhosphoSite:P04256 PRIDE:P04256 GeneID:29578
           KEGG:rno:29578 UCSC:RGD:69234 NextBio:609678 ArrayExpress:P04256
           Genevestigator:P04256 GermOnline:ENSRNOG00000036839 Uniprot:P04256
        Length = 320

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 69/170 (40%), Positives = 107/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALCKQ 184

 Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 144 (55.7 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 147

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   148 FAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALCK 183


>UNIPROTKB|F1PA19 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 EMBL:AAEX03007693 EMBL:AAEX03007694
            Ensembl:ENSCAFT00000000377 OMA:GNDSSYG Uniprot:F1PA19
        Length = 264

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 73/157 (46%), Positives = 99/157 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLSW TS + L++YF  FG V D  I  DP T RSRGFGFI F +  +VEKVL  
Sbjct:     1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LDG+ IDPK A    +  +    KKIFVGG++ + + E+++ YF +FG++E   + 
Sbjct:    61 KEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 116

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKK 319
             MD ++ + RGF F+TF+ EE V  + E  FH I   K
Sbjct:   117 MDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSK 153

 Score = 162 (62.1 bits), Expect = 8.5e-10, P = 8.5e-10
 Identities = 34/90 (37%), Positives = 57/90 (63%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+FVGG+S DTS +++K YF++FG+V +  + MD  T R RGFGF+ F++   V+ + + 
Sbjct:     1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60

Query:   311 HFHMIKNKKVECKKAQP--KEAVQANLLVG 338
               H +  + ++ KKA    K+ V+  + VG
Sbjct:    61 KEHRLDGRVIDPKKAMAMKKDPVK-KIFVG 89


>UNIPROTKB|D4A6A2 [details] [associations]
            symbol:D4A6A2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00949070
            ProteinModelPortal:D4A6A2 Ensembl:ENSRNOT00000035567 Uniprot:D4A6A2
        Length = 232

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 73/185 (39%), Positives = 115/185 (62%)

Query:   156 GDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             G DP       KLF+GGLS++T+ + LRE+F  +G +TD ++M+DP T+RSRGFGF+T++
Sbjct:     3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFQKWGTLTDCVVMRDPQTKRSRGFGFVTYS 62

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKA 268
               E V+  +    H +DG+ ++PK A  +    +P      KKIFVGG+ +DT    ++ 
Sbjct:    63 -CEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTGEYNLRD 121

Query:   269 YFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    +H I     E KKA  K
Sbjct:   122 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 181

Query:   329 EAVQA 333
             + +Q+
Sbjct:   182 QEMQS 186

 Score = 158 (60.7 bits), Expect = 9.0e-10, P = 9.0e-10
 Identities = 31/89 (34%), Positives = 50/89 (56%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LR+YF  +G +  + +M+D  + + RGF F+TF 
Sbjct:    93 SVKPGAHLTVKKIFVGGIKEDTGEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 152

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K++    HT++G   + K A  K
Sbjct:   153 DHDTVDKIVVQKYHTINGHNCEVKKALSK 181


>TAIR|locus:2168848 [details] [associations]
            symbol:AT5G40490 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0030529 EMBL:AB009052 HOGENOM:HOG000234441
            HSSP:Q61474 KO:K12741 eggNOG:NOG289504 EMBL:AY136466
            IPI:IPI00518075 RefSeq:NP_198865.1 UniGene:At.30284
            ProteinModelPortal:Q9FM47 SMR:Q9FM47 PaxDb:Q9FM47 PRIDE:Q9FM47
            EnsemblPlants:AT5G40490.1 GeneID:834047 KEGG:ath:AT5G40490
            TAIR:At5g40490 InParanoid:Q9FM47 OMA:YESEDMV PhylomeDB:Q9FM47
            ProtClustDB:CLSN2916909 ArrayExpress:Q9FM47 Genevestigator:Q9FM47
            Uniprot:Q9FM47
        Length = 423

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 76/186 (40%), Positives = 120/186 (64%)

Query:   148 DSGRSTP-TGDDPTSA-KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGF 205
             D  +S P +G    SA K+FVGGL+ +T+S +  ++FG +G +TD +IMKD  T + RGF
Sbjct:    26 DDDKSQPHSGGGVDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGF 85

Query:   206 GFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGN-RTKKIFVGGVSQDTSAE 264
             GF+T+A+   V+KV++   H + GK+++ K   P+      + +TKKIFVGG+      +
Sbjct:    86 GFVTYADSSVVDKVIQ-DNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDD 144

Query:   265 EVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHM-IKNKKVECK 323
             E K +F QFG+++E  ++ D  T R RGFGFVT+E+E++VDH+      + +   +VE K
Sbjct:   145 EFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIK 204

Query:   324 KAQPKE 329
             KA+PK+
Sbjct:   205 KAEPKK 210

 Score = 194 (73.4 bits), Expect = 8.3e-13, P = 8.3e-13
 Identities = 44/137 (32%), Positives = 84/137 (61%)

Query:   212 EPETVEKVLKVPIHTLDGKKI-DPKHATPKNRPKIG---NRTKKIFVGGVSQDTSAEEVK 267
             +P   E V++  IH  D K   D +    K++P  G   +   KIFVGG++++T++ E  
Sbjct:     2 DPYGTETVIEDEIH--DPKPSEDIEDDDDKSQPHSGGGVDSAGKIFVGGLARETTSAEFL 59

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              +F ++G++ ++V++ D++T + RGFGFVT+ +  VVD + + + H+I  K+VE K+  P
Sbjct:    60 KHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQDN-HIIIGKQVEIKRTIP 118

Query:   328 KEAVQANLLVGKRVILG 344
             + ++ +N    K++ +G
Sbjct:   119 RGSMSSNDFKTKKIFVG 135

 Score = 151 (58.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
 Identities = 35/122 (28%), Positives = 65/122 (53%)

Query:   131 VVREAHQLVLVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTD 190
             V+++ H ++    +      R + + +D  + K+FVGG+      ++ +E+F  FG + +
Sbjct:    99 VIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKE 158

Query:   191 VLIMKDPITQRSRGFGFITFAEPETVEKVL-KVPIHTLDGKKIDPKHATPKNRPKIGNRT 249
               IM+D  T RSRGFGF+T+   + V+ +L K     L G +++ K A PK    +   +
Sbjct:   159 HQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPS 218

Query:   250 KK 251
             K+
Sbjct:   219 KR 220

 Score = 42 (19.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query:   108 DSGRSTP-TGDDPTSA-KLFVGGL 129
             D  +S P +G    SA K+FVGGL
Sbjct:    26 DDDKSQPHSGGGVDSAGKIFVGGL 49


>FB|FBgn0001215 [details] [associations]
            symbol:Hrb98DE "Heterogeneous nuclear ribonucleoprotein at
            98DE" species:7227 "Drosophila melanogaster" [GO:0030529
            "ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0003729
            "mRNA binding" evidence=ISS;NAS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001745 "compound eye morphogenesis"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IMP] [GO:0005703 "polytene chromosome
            puff" evidence=IDA] [GO:0033119 "negative regulation of RNA
            splicing" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0045727 "positive regulation of translation" evidence=IMP]
            [GO:0048477 "oogenesis" evidence=IMP] [GO:0036099 "female germ-line
            stem cell maintenance" evidence=IMP] [GO:0048027 "mRNA 5'-UTR
            binding" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
            GO:GO:0005634 GO:GO:0000166 GO:GO:0043565 Gene3D:3.30.70.330
            GO:GO:0048477 GO:GO:0048027 GO:GO:0030529 GO:GO:0033119
            GO:GO:0045727 eggNOG:COG0724 GO:GO:0005703 GO:GO:0000381
            GeneTree:ENSGT00700000104255 GO:GO:0036099 KO:K12741
            OrthoDB:EOG46WWRF EMBL:M15766 EMBL:M25545 EMBL:M28871 EMBL:M28872
            EMBL:M33955 EMBL:M31560 EMBL:M28870 EMBL:AY061448 PIR:A26459
            RefSeq:NP_524543.1 RefSeq:NP_733249.1 RefSeq:NP_733250.1
            RefSeq:NP_733251.1 RefSeq:NP_733252.1 RefSeq:NP_733253.1
            UniGene:Dm.7147 ProteinModelPortal:P07909 SMR:P07909 DIP:DIP-19217N
            IntAct:P07909 MINT:MINT-764040 STRING:P07909 PaxDb:P07909
            PRIDE:P07909 EnsemblMetazoa:FBtr0085300 EnsemblMetazoa:FBtr0085301
            GeneID:43385 KEGG:dme:Dmel_CG9983 CTD:43385 FlyBase:FBgn0001215
            InParanoid:P07909 OMA:INIVIDK PhylomeDB:P07909 ChiTaRS:Hrb98DE
            GenomeRNAi:43385 NextBio:833644 Bgee:P07909 GermOnline:CG9983
            Uniprot:P07909
        Length = 365

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 71/193 (36%), Positives = 116/193 (60%)

Query:   142 NGKSSG-DSGRSTPTGDDPTSA-KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPIT 199
             NG S+G D      +  +P    KLF+GGL ++T+ E L+ +F  +G + DV++MKDP T
Sbjct:     9 NGNSNGHDDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRT 68

Query:   200 QRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK---NRPKIGNRTKKIFVGG 256
             +RSRGFGFIT++    +++  K   H +DG+ ++PK A P+   + P  G   KK+FVG 
Sbjct:    69 KRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGA 128

Query:   257 VSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIK 316
             +  D   + ++ YF  FG + +  +++D++T + RGF FV F++ + VD +     H + 
Sbjct:   129 LKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLN 188

Query:   317 NKKVECKKAQPKE 329
              K V+ KKA PK+
Sbjct:   189 GKMVDVKKALPKQ 201

 Score = 173 (66.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
 Identities = 33/99 (33%), Positives = 62/99 (62%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+   T+ E +KA+F ++G + + V++ D +TKR RGFGF+T+ +  ++D   +
Sbjct:    31 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 90

Query:   310 IHFHMIKNKKVECKKAQPKEAVQA-NL-LVGKRVILGPL 346
                H I  + VE K+A P++ + + N     K++ +G L
Sbjct:    91 SRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGAL 129

 Score = 161 (61.7 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
 Identities = 34/87 (39%), Positives = 49/87 (56%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T  KLFVG L      + +R+YF  FG + D+ I+ D  T + RGF F+ F + + V+KV
Sbjct:   120 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 179

Query:   220 LKVPIHTLDGKKIDPKHATPKNRPKIG 246
             +    H L+GK +D K A PK   + G
Sbjct:   180 VLQKQHQLNGKMVDVKKALPKQNDQQG 206

 Score = 44 (20.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query:    93 NSN-NQLVLVNGKSSG-DSGRSTPTGDDPTSA-KLFVGGLN 130
             NSN NQ    NG S+G D      +  +P    KLF+GGL+
Sbjct:     3 NSNQNQ----NGNSNGHDDDFPQDSITEPEHMRKLFIGGLD 39


>UNIPROTKB|F1NCI5 [details] [associations]
            symbol:HNRNPA0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006954 "inflammatory
            response" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0032496 "response to lipopolysaccharide" evidence=IEA]
            [GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006954
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
            GeneTree:ENSGT00700000104255 OMA:EDNQHAL EMBL:AADN02028465
            IPI:IPI00573116 Ensembl:ENSGALT00000009947 Uniprot:F1NCI5
        Length = 328

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 73/196 (37%), Positives = 117/196 (59%)

Query:   142 NGKSSGDSGRSTPTG-DDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQ 200
             +G+ S  +     TG ++    KLF+GGL+ QT+   LRE+F  +G +TD +++ +P T+
Sbjct:     7 DGRRSLSARPRRGTGMENSQLCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTK 66

Query:   201 RSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGV 257
             RSR FGF+T++  E  +  +    H +DG  ++ K A  +    +P    + KK+FVGG+
Sbjct:    67 RSRCFGFVTYSAVEEADAAMAASPHAVDGNSVELKRAVSREDSAKPGAHAKVKKLFVGGL 126

Query:   258 SQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKN 317
               D    ++  +FSQFG VE+  ++ D+Q+ + RGFGFV F+N +  D    + FH I+ 
Sbjct:   127 KGDVGEGDLVQHFSQFGPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQG 186

Query:   318 KKVECKKAQPKEAVQA 333
              +VE KKA PKE +QA
Sbjct:   187 HRVEVKKAVPKEDIQA 202

 Score = 140 (54.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
 Identities = 29/84 (34%), Positives = 42/84 (50%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLFVGGL        L ++F  FG V    I+ D  + + RGFGF+ F   +  +K   V
Sbjct:   120 KLFVGGLKGDVGEGDLVQHFSQFGPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVV 179

Query:   223 PIHTLDGKKIDPKHATPKNRPKIG 246
               H + G +++ K A PK   + G
Sbjct:   180 KFHPIQGHRVEVKKAVPKEDIQAG 203

 Score = 46 (21.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query:   102 NGKSSGDSGRSTPTG-DDPTSAKLFVGGLNV 131
             +G+ S  +     TG ++    KLF+GGLNV
Sbjct:     7 DGRRSLSARPRRGTGMENSQLCKLFIGGLNV 37

 Score = 38 (18.4 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query:    96 NQLVLVNGKSSGDSGRSTPTGDDPTSAKLFVGGL 129
             N + L    S  DS +  P G      KLFVGGL
Sbjct:    96 NSVELKRAVSREDSAK--P-GAHAKVKKLFVGGL 126


>UNIPROTKB|D4A491 [details] [associations]
            symbol:D4A491 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
            IPI:IPI00560785 ProteinModelPortal:D4A491
            Ensembl:ENSRNOT00000046349 OMA:DNAMEAR Uniprot:D4A491
        Length = 239

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 67/166 (40%), Positives = 104/166 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:     8 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 67

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H ++G+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK E  
Sbjct:    68 RPHKVNGRVVEPKRAVSREDSQRPDAYLTVKKIFVGGIKEDTEEHHLRDYFGQYGKTEVI 127

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKA 325
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA
Sbjct:   128 EIVTDRGSGKKRGFAFVTFDDRDSVDKIVIQKYHTVNGHNCEVRKA 173

 Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 37/100 (37%), Positives = 61/100 (61%)

Query:   248 RTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHI 307
             + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E VD  
Sbjct:     5 QVRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 64

Query:   308 CEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
                  H +  + VE K+A  +E  Q   A L V K++ +G
Sbjct:    65 MNARPHKVNGRVVEPKRAVSREDSQRPDAYLTV-KKIFVG 103

 Score = 151 (58.2 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 29/88 (32%), Positives = 50/88 (56%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T  K+FVGG+   T    LR+YFG +G    + I+ D  + + RGF F+TF + ++V+K+
Sbjct:    96 TVKKIFVGGIKEDTEEHHLRDYFGQYGKTEVIEIVTDRGSGKKRGFAFVTFDDRDSVDKI 155

Query:   220 LKVPIHTLDGKKIDPKHATPKNRPKIGN 247
             +    HT++G   + + A    R + G+
Sbjct:   156 VIQKYHTVNGHNCEVRKAPSNQRGRSGS 183


>UNIPROTKB|D4A1X0 [details] [associations]
            symbol:D4A1X0 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0097157
            GO:GO:0048025 OrthoDB:EOG4HQDKF IPI:IPI00778370
            ProteinModelPortal:D4A1X0 Ensembl:ENSRNOT00000061082 Uniprot:D4A1X0
        Length = 312

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 65/173 (37%), Positives = 110/173 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR Y+  +G +TD ++M+DP ++RSRGFGF+TF+    V+  +  
Sbjct:    10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDVAMAA 69

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ ++PK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    70 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 129

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H       E +KA  ++ +Q
Sbjct:   130 EIITDRQSGK-RGFGFVTFDDHDPVDKIVLQKYHTKNGHNAEVRKALSRQEMQ 181

 Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 32/90 (35%), Positives = 51/90 (56%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:    89 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGK-RGFGF 144

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT +G   + + A
Sbjct:   145 VTFDDHDPVDKIVLQKYHTKNGHNAEVRKA 174


>TAIR|locus:2050992 [details] [associations]
            symbol:AT2G33410 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC002332 HOGENOM:HOG000234441 KO:K14411 HSSP:Q61474
            ProtClustDB:CLSN2913105 OMA:GNDSSYG EMBL:AY136298 EMBL:BT000416
            IPI:IPI00531202 PIR:B84745 RefSeq:NP_180899.1 UniGene:At.22217
            ProteinModelPortal:O22791 SMR:O22791 IntAct:O22791 STRING:O22791
            PRIDE:O22791 ProMEX:O22791 EnsemblPlants:AT2G33410.1 GeneID:817905
            KEGG:ath:AT2G33410 TAIR:At2g33410 InParanoid:O22791
            PhylomeDB:O22791 ArrayExpress:O22791 Genevestigator:O22791
            Uniprot:O22791
        Length = 404

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 75/184 (40%), Positives = 112/184 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GG+SW T    LREYF  FG V  V +M++  T R RGFGF+ F++P  +++VL+ 
Sbjct:     7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66

Query:   223 PIHT----LDGKK-IDPKHATPKNRPKIGN-----------RTKKIFVGGVSQDTSAEEV 266
               H     +D K+ +  +  +P  R    N           RTKKIFVGG+    +++E 
Sbjct:    67 KHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPALTSDEF 126

Query:   267 KAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQ 326
             +AYF  +G V + V+++DQ T+R RGFGFV+F++E+ VD +    FH +  K+VE K+A 
Sbjct:   127 RAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRAL 186

Query:   327 PKEA 330
             PK+A
Sbjct:   187 PKDA 190

 Score = 197 (74.4 bits), Expect = 3.2e-13, P = 3.2e-13
 Identities = 42/107 (39%), Positives = 67/107 (62%)

Query:   143 GKSSG-DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQR 201
             G+S   ++ R+  +G +  + K+FVGGL    +S++ R YF  +G V+D +IM D  TQR
Sbjct:    90 GRSGTFNASRNFDSGANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQR 149

Query:   202 SRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN-RPKIGN 247
              RGFGF++F   ++V+ VL    H L+GK+++ K A PK+  P I +
Sbjct:   150 PRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPKDANPGIAS 196


>UNIPROTKB|F1SA35 [details] [associations]
            symbol:LOC100737421 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 EMBL:FP326688 RefSeq:XP_003480852.1
            Ensembl:ENSSSCT00000014862 GeneID:100737421 KEGG:ssc:100737421
            OMA:STFGNIV Uniprot:F1SA35
        Length = 349

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 65/173 (37%), Positives = 107/173 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL  +T+ + LR Y+  +G +TD ++++DP  +RSRGFGF+TF+    V+  +  
Sbjct:    22 KLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSVAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DGK +DPK A  +    +P      KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    82 RPHSVDGKVVDPKRAVAREESEKPGAHLAVKKLFVGGIKEDTEEHHLRDYFEKYGKIDTI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I     E  KA  ++ +Q
Sbjct:   142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHHAEVGKALSRQEMQ 194

 Score = 167 (63.8 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 37/108 (34%), Positives = 62/108 (57%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K + +I  +  K+F+GG+   T+ + ++ Y+ Q+GK+ + V+L D   KR RGFGFVTF 
Sbjct:    11 KRKKRINEQFHKLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFS 70

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
             +   VD       H +  K V+ K+A  +E  +   A+L V K++ +G
Sbjct:    71 SVAEVDAAMAARPHSVDGKVVDPKRAVAREESEKPGAHLAV-KKLFVG 117


>FB|FBgn0004237 [details] [associations]
            symbol:Hrb87F "Heterogeneous nuclear ribonucleoprotein at
            87F" species:7227 "Drosophila melanogaster" [GO:0030529
            "ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0005703
            "polytene chromosome puff" evidence=IDA] [GO:0005654 "nucleoplasm"
            evidence=IDA] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0000785 "chromatin" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0035062 "omega speckle" evidence=IDA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0001745 "compound eye morphogenesis"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0007067 "mitosis" evidence=IMP] [GO:0022008
            "neurogenesis" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
            GO:GO:0005737 GO:GO:0007067 GO:GO:0022008 GO:GO:0000166
            GO:GO:0043565 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000785
            GO:GO:0030529 eggNOG:COG0724 GO:GO:0005703 GO:GO:0000381
            GeneTree:ENSGT00700000104255 KO:K12741 EMBL:X54803 EMBL:X58183
            EMBL:X58184 EMBL:X59691 EMBL:X62636 EMBL:BT012315 PIR:A41732
            PIR:S22315 RefSeq:NP_001163602.1 RefSeq:NP_476806.1
            RefSeq:NP_476807.1 UniGene:Dm.1711 ProteinModelPortal:P48810
            SMR:P48810 IntAct:P48810 MINT:MINT-296059 STRING:P48810
            PaxDb:P48810 EnsemblMetazoa:FBtr0082851 EnsemblMetazoa:FBtr0300590
            EnsemblMetazoa:FBtr0310621 GeneID:48535 KEGG:dme:Dmel_CG12749
            CTD:48535 FlyBase:FBgn0004237 InParanoid:P48810 OMA:MENRDAK
            OrthoDB:EOG46WWRF PhylomeDB:P48810 ChiTaRS:Hrb87F GenomeRNAi:48535
            NextBio:839451 Bgee:P48810 GermOnline:CG12749 GO:GO:0035062
            Uniprot:P48810
        Length = 385

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 70/189 (37%), Positives = 112/189 (59%)

Query:   148 DSGRSTPTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSR 203
             DS  +   G++ T      KLF+GGL ++T+ + L+ +F  +G + DV++MKDP T+RSR
Sbjct:     6 DSNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSR 65

Query:   204 GFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNR---PKIGNRTKKIFVGGVSQD 260
             GFGFIT+++   ++       H +DG+ ++PK A P+     P  G   KK+FVGG+  D
Sbjct:    66 GFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDD 125

Query:   261 TSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKV 320
                E ++ YF  FG++    ++ D+ T + RGF F+ F++ + VD I     H IKNK +
Sbjct:   126 HDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTL 185

Query:   321 ECKKAQPKE 329
             + KKA  K+
Sbjct:   186 DVKKAIAKQ 194

 Score = 169 (64.5 bits), Expect = 5.0e-10, P = 5.0e-10
 Identities = 34/102 (33%), Positives = 63/102 (61%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+   T+ + +KA+F ++G + + V++ D +TKR RGFGF+T+    ++D+   
Sbjct:    24 RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 83

Query:   310 IHFHMIKNKKVECKKAQPKEAVQA-NL-LVGKRVILGPLGLR 349
                H I  + VE K+A P++ + + N     K++ +G  GLR
Sbjct:    84 ARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVG--GLR 123


>UNIPROTKB|J9NZR9 [details] [associations]
            symbol:J9NZR9 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 EMBL:AAEX03000342
            Ensembl:ENSCAFT00000001210 OMA:GSKINAN Uniprot:J9NZR9
        Length = 269

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 74/167 (44%), Positives = 100/167 (59%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+ GLSW TS + L      FG V D +I  DP+T RSRGFGF+ F E  +V+KVL++
Sbjct:    17 KMFIRGLSWDTSKKDLT-----FGEVVDCIIETDPVTGRSRGFGFVLFKEAASVDKVLEL 71

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H LD   IDPK A     P      KK+FVGG+S DT  E++K Y   FG++E   + 
Sbjct:    72 KEHKLDSMLIDPKRAKALKEPP-----KKVFVGGLSPDTYEEQIKEYLGAFGEIENIELP 126

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             MD +T   RGF F+T+ +E+ V  + E  +H I + K E K A+PKE
Sbjct:   127 MDTKTNERRGFCFITYTDEKPVKKLLENRYHQIGSGKCEIKVAEPKE 173

 Score = 121 (47.7 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 28/88 (31%), Positives = 49/88 (55%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+ G+S DTS +++      FG+V + ++  D  T R RGFGFV F+    VD + E+
Sbjct:    17 KMFIRGLSWDTSKKDLT-----FGEVVDCIIETDPVTGRSRGFGFVLFKEAASVDKVLEL 71

Query:   311 HFHMIKNKKVECKKAQPKEAVQANLLVG 338
               H + +  ++ K+A+  +     + VG
Sbjct:    72 KEHKLDSMLIDPKRAKALKEPPKKVFVG 99


>UNIPROTKB|E2R5N6 [details] [associations]
            symbol:E2R5N6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03012109
            Ensembl:ENSCAFT00000010232 OMA:EMASASC Uniprot:E2R5N6
        Length = 322

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 69/184 (37%), Positives = 108/184 (58%)

Query:   149 SGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFI 208
             S   +P G +    KLF+GG S++T+ E LR +F   G +TD ++M+DP T+RSRGFGF+
Sbjct:     2 SKSESPKGPEQLQ-KLFIGGWSFETTDESLRSHFKQRGILTDCVVMRDPNTKRSRGFGFV 60

Query:   209 TFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEE 265
             T+   E V+  +    H +DG+ ++PK  + K    RP      KKIF GG+ +DT    
Sbjct:    61 TYTAVEEVDPAMHARPHKVDGRVVEPKRTSSKEDSQRPGAHLTVKKIFAGGIKEDTEEHH 120

Query:   266 VKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKA 325
             ++ YF Q+GK+E   ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA
Sbjct:   121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNWEVRKA 180

Query:   326 QPKE 329
               K+
Sbjct:   181 LSKQ 184

 Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 39/105 (37%), Positives = 60/105 (57%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG S +T+ E ++++F Q G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKGPEQLQKLFIGGWSFETTDESLRSHFKQRGILTDCVVMRDPNTKRSRGFGFVTYTAVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+   KE  Q   A+L V K++  G
Sbjct:    67 EVDPAMHARPHKVDGRVVEPKRTSSKEDSQRPGAHLTV-KKIFAG 110

 Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 31/101 (30%), Positives = 52/101 (51%)

Query:   140 LVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPIT 199
             +V  K +     S   G   T  K+F GG+   T    LR+YF  +G +  + IM D  +
Sbjct:    83 VVEPKRTSSKEDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGS 142

Query:   200 QRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
              + RGF F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   143 GKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNWEVRKALSK 183


>UNIPROTKB|F1N4K3 [details] [associations]
            symbol:F1N4K3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:DAAA02019527
            IPI:IPI00906169 Ensembl:ENSBTAT00000002951 OMA:HAINGHH
            Uniprot:F1N4K3
        Length = 329

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 67/168 (39%), Positives = 107/168 (63%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS+QT+ E LR+Y+  +G +TD ++++D  +QRSRG GF+TF+    V+  +  
Sbjct:    10 KLFIGGLSFQTTEESLRKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSVTEVDAAMAA 69

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNR-----TKKIFVGGVSQDTSAEEVKAYFSQFGKVE 277
               H++DG+ ++P+ A P  R   G R      KK+FVGG+ +DT    ++ YF ++GK++
Sbjct:    70 RPHSIDGRVLEPRRAIP--REASGQRGAHWTLKKLFVGGIKEDTEEHHLREYFEKYGKID 127

Query:   278 ETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKA 325
                ++ D+Q+ R RGFGFVTF++ + VD I    +H I     E +KA
Sbjct:   128 AIEIITDRQSGRKRGFGFVTFDDYDPVDKIVLQKYHAINGHHAEVRKA 175

 Score = 154 (59.3 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 31/87 (35%), Positives = 53/87 (60%)

Query:   244 KIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEV 303
             K   + +K+F+GG+S  T+ E ++ Y+ Q+G++ + V+L D  ++R RG GFVTF +   
Sbjct:     3 KEAEQIRKLFIGGLSFQTTEESLRKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSVTE 62

Query:   304 VDHICEIHFHMIKNKKVECKKAQPKEA 330
             VD       H I  + +E ++A P+EA
Sbjct:    63 VDAAMAARPHSIDGRVLEPRRAIPREA 89

 Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 32/94 (34%), Positives = 53/94 (56%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T  KLFVGG+   T    LREYF  +G +  + I+ D  + R RGFGF+TF + + V+K+
Sbjct:    98 TLKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKI 157

Query:   220 LKVPIHTLDGKKIDPKHATP--KNRPKIGNRTKK 251
             +    H ++G   + + A    + +   G+R++K
Sbjct:   158 VLQKYHAINGHHAEVRKALSIWEMQQVQGSRSRK 191


>UNIPROTKB|F1N3T3 [details] [associations]
            symbol:F1N3T3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 EMBL:DAAA02019525 IPI:IPI00709098
            Ensembl:ENSBTAT00000014774 OMA:FGGYPCY Uniprot:F1N3T3
        Length = 352

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 68/194 (35%), Positives = 119/194 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS +T+ E L+ Y+  +G +TD ++++   +Q+SRGFGF+TF+    V+  +  
Sbjct:    22 KLFIGGLSSETTEESLKNYYQQWGELTDCVVIRGLASQKSRGFGFVTFSSVAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKNRP-KIGN--RTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ +DPK A  + +  K G+    KK+FVGG+ +DT    ++ YF ++GK++  
Sbjct:    82 RPHSIDGRVVDPKRAVSREKSEKQGSLVNVKKLFVGGIKEDTEEHHLREYFEKYGKIDAI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGK 339
              ++ D+Q+ + RGFGFVTF++ + VD I    +H I   + E  KA  ++ ++   + G 
Sbjct:   142 EIITDRQSGKKRGFGFVTFDDYDPVDKIMLQKYHAINGHRAEVGKALSRQEMKE--IQGP 199

Query:   340 RVILG-PLGLRMAA 352
             R   G P G  +++
Sbjct:   200 RSRKGGPFGFSVSS 213

 Score = 162 (62.1 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 36/111 (32%), Positives = 65/111 (58%)

Query:   237 ATPKNRPKIGN-RTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGF 295
             + P  R K  N + +K+F+GG+S +T+ E +K Y+ Q+G++ + V++    +++ RGFGF
Sbjct:     7 SVPVKREKKENEQIRKLFIGGLSSETTEESLKNYYQQWGELTDCVVIRGLASQKSRGFGF 66

Query:   296 VTFENEEVVDHICEIHFHMIKNKKVECKKA--QPKEAVQANLLVGKRVILG 344
             VTF +   VD       H I  + V+ K+A  + K   Q +L+  K++ +G
Sbjct:    67 VTFSSVAEVDAAMAARPHSIDGRVVDPKRAVSREKSEKQGSLVNVKKLFVG 117

 Score = 150 (57.9 bits), Expect = 6.0e-08, P = 6.0e-08
 Identities = 35/114 (30%), Positives = 59/114 (51%)

Query:   140 LVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPIT 199
             +V+ K +    +S   G      KLFVGG+   T    LREYF  +G +  + I+ D  +
Sbjct:    90 VVDPKRAVSREKSEKQGSLVNVKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQS 149

Query:   200 QRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKI--GNRTKK 251
              + RGFGF+TF + + V+K++    H ++G + +   A  +   K   G R++K
Sbjct:   150 GKKRGFGFVTFDDYDPVDKIMLQKYHAINGHRAEVGKALSRQEMKEIQGPRSRK 203


>UNIPROTKB|E9PSU5 [details] [associations]
            symbol:E9PSU5 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 IPI:IPI00364363 PRIDE:E9PSU5
            Ensembl:ENSRNOT00000022054 Uniprot:E9PSU5
        Length = 363

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 74/192 (38%), Positives = 116/192 (60%)

Query:   156 GDDPTSA----KLFVGGLSWQTSSEKLREYF-GM------FGAVTDVLIMKDPITQRSRG 204
             G DP       KLF+GGLS++T+ + LRE+F G       +G +TD ++M+DP T+RSRG
Sbjct:     3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEGWRDGSEKWGTLTDCVVMRDPQTKRSRG 62

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDT 261
             FGF+T++  E V+  +    H +DG+ ++PK A  +    +P      KKIFVGG+ +DT
Sbjct:    63 FGFVTYS-CEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDT 121

Query:   262 SAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVE 321
                 ++ YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I    +H I     E
Sbjct:   122 GEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 181

Query:   322 CKKAQPKEAVQA 333
              KKA  K+ +Q+
Sbjct:   182 VKKALSKQEMQS 193

 Score = 158 (60.7 bits), Expect = 7.9e-09, P = 7.9e-09
 Identities = 31/89 (34%), Positives = 50/89 (56%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LR+YF  +G +  + +M+D  + + RGF F+TF 
Sbjct:   100 SVKPGAHLTVKKIFVGGIKEDTGEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 159

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K++    HT++G   + K A  K
Sbjct:   160 DHDTVDKIVVQKYHTINGHNCEVKKALSK 188


>UNIPROTKB|F1M5N1 [details] [associations]
            symbol:F1M5N1 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00567689
            ProteinModelPortal:F1M5N1 Ensembl:ENSRNOT00000023344 Uniprot:F1M5N1
        Length = 207

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 67/170 (39%), Positives = 103/170 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    11 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 70

Query:   223 PIHTLDGKKIDPKHATP---KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A       RP       KIFVG + +DT    ++ YF Q+GK E  
Sbjct:    71 RPHKVDGRVVEPKRAVSIEDSQRPG-AYLNMKIFVGAIKEDTEEHHLRDYFGQYGKTEVI 129

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   130 EIVTDRGSGKKRGFAFVTFDDRDSVDKIVIQKYHTVNGHNCEVRKAPSKQ 179

 Score = 162 (62.1 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 33/100 (33%), Positives = 58/100 (58%)

Query:   248 RTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHI 307
             + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E VD  
Sbjct:     8 QVRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 67

Query:   308 CEIHFHMIKNKKVECKKAQPKEAVQA-NLLVGKRVILGPL 346
                  H +  + VE K+A   E  Q     +  ++ +G +
Sbjct:    68 MNARPHKVDGRVVEPKRAVSIEDSQRPGAYLNMKIFVGAI 107


>UNIPROTKB|F1M2S4 [details] [associations]
            symbol:F1M2S4 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00951465
            ProteinModelPortal:F1M2S4 Ensembl:ENSRNOT00000050715 Uniprot:F1M2S4
        Length = 208

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 68/170 (40%), Positives = 105/170 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:     8 KLFIGGLSFKTTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 67

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVG   +DT    ++ YF Q+GK+E  
Sbjct:    68 RPHKVDGRVVEPKRAVSREDSRRPGAHLTVKKIFVG---EDTEEHHLRDYFEQYGKIEVI 124

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   125 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 174


>UNIPROTKB|F1M6U1 [details] [associations]
            symbol:F1M6U1 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 IPI:IPI00362299 Ensembl:ENSRNOT00000007800
            Uniprot:F1M6U1
        Length = 252

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 65/170 (38%), Positives = 103/170 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+ GLS++T+ E LR +F  +G +TD ++M+DP T+R RGFGF+T+   E V+  +  
Sbjct:     8 KLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNA 67

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVG + +DT    ++ YF Q+GK+E  
Sbjct:    68 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVI 127

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   128 EIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 177

 Score = 163 (62.4 bits), Expect = 4.6e-10, P = 4.6e-10
 Identities = 38/106 (35%), Positives = 64/106 (60%)

Query:   247 NRTK---KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEV 303
             NRT+   K+F+ G+S +T+ E ++++F ++G + + V++ D  TKR RGFGFVT+   E 
Sbjct:     1 NRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEE 60

Query:   304 VDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPL 346
             VD       H +  + VE K+A  +E  Q   A+L V K++ +G +
Sbjct:    61 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVGSI 105

 Score = 139 (54.0 bits), Expect = 4.1e-07, P = 4.1e-07
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVG +   T    LREYF  +G +  + IM D  + + RG
Sbjct:    84 SREDSQR--P-GAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRG 140

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT++G   + + A  K
Sbjct:   141 FVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 176


>UNIPROTKB|F1LUM4 [details] [associations]
            symbol:F1LUM4 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00389838
            ProteinModelPortal:F1LUM4 Ensembl:ENSRNOT00000031839 Uniprot:F1LUM4
        Length = 209

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 66/173 (38%), Positives = 106/173 (61%)

Query:   164 LFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVP 223
             L +GGLS++T+ + LRE+   +G +TD ++M DP T+ SRGFGF+T++  E V+  +   
Sbjct:     1 LLIGGLSFETTDDSLREHSEKWGTLTDCVVMTDPQTEHSRGFGFVTYSCVEEVDAAMCAW 60

Query:   224 IHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
              H +DG+ ++PK A  +    +P      KKIFVGG+ +DT    ++ YF ++GK+E   
Sbjct:    61 PHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIE 120

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
             ++ D+Q+ + RGF FVTF++ + VD I     H I     E KKA  K+ +Q+
Sbjct:   121 VMEDRQSGKKRGFAFVTFDDHDTVDKIVFQEHHAINRHNCEVKKAVSKQEMQS 173

 Score = 143 (55.4 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 29/89 (32%), Positives = 48/89 (53%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LR+YF  +G +  + +M+D  + + RGF F+TF 
Sbjct:    80 SVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 139

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K++    H ++    + K A  K
Sbjct:   140 DHDTVDKIVFQEHHAINRHNCEVKKAVSK 168


>UNIPROTKB|G5E5V7 [details] [associations]
            symbol:G5E5V7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0051170 "nuclear import" evidence=IEA] [GO:0051168 "nuclear
            export" evidence=IEA] [GO:0045111 "intermediate filament
            cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
            evidence=IEA] [GO:0003697 "single-stranded DNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
            EMBL:DAAA02007960 Ensembl:ENSBTAT00000036150 OMA:ANTMPIL
            Uniprot:G5E5V7
        Length = 319

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 67/170 (39%), Positives = 103/170 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M DP T+RSRGFGF+T+   E V+  +  
Sbjct:    24 KLFIGGLSFETTDESLRSHFEQWGMLTDCVVM-DPNTKRSRGFGFVTYTTVEEVDAAMNA 82

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
                 +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    83 RPQKMDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 142

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I    +H       E +KA  K+
Sbjct:   143 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTGNGHNCEVRKALSKQ 192

 Score = 162 (62.1 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 39/105 (37%), Positives = 63/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V+ MD  TKR RGFGFVT+   E
Sbjct:    16 PKELEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVV-MDPNTKRSRGFGFVTYTTVE 74

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD         +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    75 EVDAAMNARPQKMDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 118

 Score = 141 (54.7 bits), Expect = 5.0e-07, P = 5.0e-07
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    99 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 155

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+K++    HT +G   + + A  K
Sbjct:   156 FAFVTFDDHDSVDKIVIQKYHTGNGHNCEVRKALSK 191


>UNIPROTKB|F1LYN9 [details] [associations]
            symbol:F1LYN9 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00368496
            Ensembl:ENSRNOT00000035403 Uniprot:F1LYN9
        Length = 263

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 65/170 (38%), Positives = 105/170 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ + LR +F  +  +TD ++M+DP ++RSRGFG I +A  E V+  +  
Sbjct:     1 KLFIGGLSFETTDKSLRSHFEQWETLTDCVLMRDPNSKRSRGFGLIAYATVEEVDAAMNA 60

Query:   223 PIHTLDGKKIDPKHATPK---NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +   +RP      KKIFVGG  +DT    ++ YF Q+GK+E  
Sbjct:    61 RPHKVDGRVVEPKVAVSREDSHRPGAHLTVKKIFVGGSKEDTEEHHLRVYFEQYGKIEVI 120

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D  + + RGF FVTF++++ VD+I    +H +     E +KA  K+
Sbjct:   121 EIMTDIGSGKKRGFAFVTFDDQDSVDNIVIQKYHTVNGHNCEVRKALLKQ 170

 Score = 131 (51.2 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 33/96 (34%), Positives = 50/96 (52%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG    T    LR YF  +G +  + IM D  + + RG
Sbjct:    77 SREDSHR--P-GAHLTVKKIFVGGSKEDTEEHHLRVYFEQYGKIEVIEIMTDIGSGKKRG 133

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF + ++V+ ++    HT++G   + + A  K
Sbjct:   134 FAFVTFDDQDSVDNIVIQKYHTVNGHNCEVRKALLK 169


>UNIPROTKB|F1PGQ0 [details] [associations]
            symbol:F1PGQ0 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03010176
            Ensembl:ENSCAFT00000005615 OMA:RRYQRIT Uniprot:F1PGQ0
        Length = 318

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 66/170 (38%), Positives = 104/170 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G  TD ++M+DP T+RSRG GF+ +A  E V+  +  
Sbjct:    15 KLFIGGLSFETTEESLRSHFEQWGTFTDCVVMRDPNTKRSRGVGFLMYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    75 RPH-VDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 133

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + +GF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   134 EIMTDRGSGK-KGFAFVTFDDHDSVDKIVIQKYHPVNGHSCEVRKALSKQ 182

 Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 38/111 (34%), Positives = 65/111 (58%)

Query:   237 ATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFV 296
             ++PK+ PK   +  K+F+GG+S +T+ E ++++F Q+G   + V++ D  TKR RG GF+
Sbjct:     2 SSPKS-PKEPEQLWKLFIGGLSFETTEESLRSHFEQWGTFTDCVVMRDPNTKRSRGVGFL 60

Query:   297 TFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              +   E VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    61 MYATVEEVDAAMNARPH-VDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 109

 Score = 132 (51.5 bits), Expect = 5.3e-06, P = 5.3e-06
 Identities = 34/111 (30%), Positives = 57/111 (51%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + +G
Sbjct:    90 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGK-KG 145

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVG 255
             F F+TF + ++V+K++    H ++G   + + A  K      + T++   G
Sbjct:   146 FAFVTFDDHDSVDKIVIQKYHPVNGHSCEVRKALSKQEMASASSTQRDLSG 196


>UNIPROTKB|E2RJS6 [details] [associations]
            symbol:E2RJS6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03015762
            Ensembl:ENSCAFT00000024318 Uniprot:E2RJS6
        Length = 316

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 68/170 (40%), Positives = 103/170 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+ GLS++T+ E LR +F  +G +T  ++M+DP T+RSRGFGF+ FA  E V+  +  
Sbjct:    15 KLFIRGLSFETTDESLRSHFEQWGTLTGCVVMRDPNTKRSRGFGFVMFATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               + ++G+ ++PK    +    RP      KKIFVGG+ +DT  EE + YF Q+GK E  
Sbjct:    75 RPNKVNGRVLEPKRFVSREDSQRPAAYLTVKKIFVGGIKEDT--EEHEDYFEQYGKFEVI 132

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ DQ + + RGF FVTF+N + VD I    +H +     E +KA  K+
Sbjct:   133 EVMTDQGSGKKRGFAFVTFDNHDSVDQIVIQKYHTVNGHSCEVRKALLKQ 182

 Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 34/104 (32%), Positives = 57/104 (54%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   +  K+F+ G+S +T+ E ++++F Q+G +   V++ D  TKR RGFGFV F   E
Sbjct:     7 PKEPEQLWKLFIRGLSFETTDESLRSHFEQWGTLTGCVVMRDPNTKRSRGFGFVMFATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ--ANLLVGKRVILG 344
              VD       + +  + +E K+   +E  Q  A  L  K++ +G
Sbjct:    67 EVDAAMNARPNKVNGRVLEPKRFVSREDSQRPAAYLTVKKIFVG 110

 Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
 Identities = 25/81 (30%), Positives = 45/81 (55%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T  K+FVGG+   T  E+  +YF  +G    + +M D  + + RGF F+TF   ++V+++
Sbjct:   103 TVKKIFVGGIKEDT--EEHEDYFEQYGKFEVIEVMTDQGSGKKRGFAFVTFDNHDSVDQI 160

Query:   220 LKVPIHTLDGKKIDPKHATPK 240
             +    HT++G   + + A  K
Sbjct:   161 VIQKYHTVNGHSCEVRKALLK 181


>UNIPROTKB|D4A2D2 [details] [associations]
            symbol:D4A2D2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
            InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
            IPI:IPI00559583 ProteinModelPortal:D4A2D2
            Ensembl:ENSRNOT00000032337 Uniprot:D4A2D2
        Length = 262

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 63/172 (36%), Positives = 106/172 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL+++T+ E LR +F  +G +T+ ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLTFETTDESLRSHFEQWGTLTECVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H +DG+ ++P+ A   +R    + T KIFVGG+ +DT    ++ Y  Q+GK+E   ++
Sbjct:    75 RPHKVDGRVVEPERAV--SREDSHSLTVKIFVGGIKEDTEEHYLRDYSEQYGKIEVIEIM 132

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQAN 334
              D+ + + RGF FVTF++ + VD I    +H + +     K    +E   A+
Sbjct:   133 TDRGSGKKRGFAFVTFDDYDSVDKIVIRKYHTVNDHNCVRKALSKQEMASAS 184

 Score = 167 (63.8 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 32/87 (36%), Positives = 54/87 (62%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG++ +T+ E ++++F Q+G + E V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLTFETTDESLRSHFEQWGTLTECVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKE 329
              VD       H +  + VE ++A  +E
Sbjct:    67 EVDAAMNARPHKVDGRVVEPERAVSRE 93

 Score = 121 (47.7 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 23/68 (33%), Positives = 41/68 (60%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             + K+FVGG+   T    LR+Y   +G +  + IM D  + + RGF F+TF + ++V+K++
Sbjct:    99 TVKIFVGGIKEDTEEHYLRDYSEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDYDSVDKIV 158

Query:   221 KVPIHTLD 228
                 HT++
Sbjct:   159 IRKYHTVN 166


>UNIPROTKB|D4AD23 [details] [associations]
            symbol:D4AD23 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
            InterPro:IPR021662 Pfam:PF11627 IPI:IPI00390944
            ProteinModelPortal:D4AD23 Ensembl:ENSRNOT00000039846 Uniprot:D4AD23
        Length = 313

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 64/167 (38%), Positives = 100/167 (59%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+G LS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGALSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
                 ++G+ ++PK A  +    RP      KKIFVGG+ +DT    ++ YF Q+GK E  
Sbjct:    75 RPQKVNGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTE-HHLRDYFEQYGKTEVI 133

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQ 326
              ++ D+   + RGF FVTF++ + VD I    +H +     E +  Q
Sbjct:   134 EIMTDRGRGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCETRVKQ 180

 Score = 166 (63.5 bits), Expect = 6.0e-10, P = 6.0e-10
 Identities = 37/105 (35%), Positives = 62/105 (59%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+G +S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGALSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD         +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 EVDAAMNARPQKVNGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 32/91 (35%), Positives = 49/91 (53%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G    + IM D    + RG
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEHH-LRDYFEQYGKTEVIEIMTDRGRGKKRG 146

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPK 235
             F F+TF + ++V+K++    HT++G   + +
Sbjct:   147 FAFVTFDDHDSVDKIVIQKYHTVNGHNCETR 177


>UNIPROTKB|B4DM51 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 EMBL:AK297295 IPI:IPI00908857
            SMR:B4DM51 STRING:B4DM51 Ensembl:ENST00000442934 Uniprot:B4DM51
        Length = 267

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 59/91 (64%), Positives = 73/91 (80%)

Query:   241 NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEN 300
             N  ++  RTKKIFVGG+S +T  E+VK YF QFGKVE+ +++ D+ T RHRGFGFVTFEN
Sbjct:    40 NLMRMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEN 99

Query:   301 EEVVDHICEIHFHMIKNKKVECKKAQPKEAV 331
             E+VV+ +CEIHFH I NK VECKKAQPKE +
Sbjct:   100 EDVVEKVCEIHFHEINNKMVECKKAQPKEVM 130

 Score = 191 (72.3 bits), Expect = 9.1e-14, P = 9.1e-14
 Identities = 36/78 (46%), Positives = 50/78 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLS  T  E +++YF  FG V D ++M D  T R RGFGF+TF   + VEKV ++
Sbjct:    50 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI 109

Query:   223 PIHTLDGKKIDPKHATPK 240
               H ++ K ++ K A PK
Sbjct:   110 HFHEINNKMVECKKAQPK 127


>UNIPROTKB|F1M3H8 [details] [associations]
            symbol:F1M3H8 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
            GeneTree:ENSGT00700000104255 IPI:IPI00777708
            ProteinModelPortal:F1M3H8 PRIDE:F1M3H8 Ensembl:ENSRNOT00000061231
            Uniprot:F1M3H8
        Length = 194

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 67/181 (37%), Positives = 107/181 (59%)

Query:   159 PTSAKL---FVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPET 215
             P++A L    +G  + QTS   LR +F  FG +TD +++ +P T+RSR FGF+T++  E 
Sbjct:     1 PSAASLCGVLIGEXNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEE 60

Query:   216 VEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQ 272
              +  +    H +DG  ++ K A  +    RP    + KK+FVGG+  D +  ++  +FSQ
Sbjct:    61 ADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQ 120

Query:   273 FGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
             FG VE+  ++ D+Q+ + RGFGFV F++ +  D    + FH I+  +VE KKA PKE + 
Sbjct:   121 FGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIV 180

Query:   333 A 333
             A
Sbjct:   181 A 181


>UNIPROTKB|F1N235 [details] [associations]
            symbol:F1N235 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 EMBL:DAAA02006449 IPI:IPI01002976
            Ensembl:ENSBTAT00000014868 OMA:LENGTGR Uniprot:F1N235
        Length = 353

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 63/173 (36%), Positives = 105/173 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+G LS +T+ E L  Y+  +G +TD ++++DP +Q+SR FGFITF+    ++  +  
Sbjct:    22 KLFIGDLSSETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAELDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPK-NRPKIGN--RTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DGK + PK A P+ +  K+G     KK+FVGG+++D     ++ YF ++GK+   
Sbjct:    82 RPHFIDGKMVMPKRAVPREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEKYGKINAI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D Q+ + RGFGF+TF++ + VD I     H I   + E +KA  ++  Q
Sbjct:   142 EIVTDGQSGKKRGFGFITFDDHDPVDKIVLQKNHTINGHRAEVRKALSRQERQ 194

 Score = 148 (57.2 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 31/98 (31%), Positives = 53/98 (54%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T  KLFVGG++       LR+YF  +G +  + I+ D  + + RGFGFITF + + V+K+
Sbjct:   110 TVKKLFVGGITEDMKEHHLRDYFEKYGKINAIEIVTDGQSGKKRGFGFITFDDHDPVDKI 169

Query:   220 LKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGV 257
             +    HT++G + + + A  +   + G   +    G V
Sbjct:   170 VLQKNHTINGHRAEVRKALSRQERQEGQHLRSRGEGDV 207


>UNIPROTKB|F1M117 [details] [associations]
            symbol:F1M117 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC128353
            EMBL:AC111733 IPI:IPI00558412 Ensembl:ENSRNOT00000023321
            Uniprot:F1M117
        Length = 366

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 71/193 (36%), Positives = 108/193 (55%)

Query:   144 KSSGDSGRSTPTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPIT 199
             K  G        G DP       KLF+GGLS++T+ + LRE+F   G +TD ++M+DP T
Sbjct:    14 KGKGRKKERRMEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKRGTLTDCVVMRDPQT 73

Query:   200 QRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGG 256
             + SRGFGF+T +  E V+  +    H +DG+ ++PK A  +    +P      KKIFVGG
Sbjct:    74 KHSRGFGFVTSSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLMVKKIFVGG 133

Query:   257 VSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIK 316
             + +DT    ++ YF ++GK E T+     + ++ RGF FVTF++++ VD I     H I 
Sbjct:   134 IKEDTEEYNLRDYFEKYGKTE-TIEGRQAEWEK-RGFAFVTFDDQDTVDKIVVQKHHTIN 191

Query:   317 NKKVECKKAQPKE 329
                 E K+A  K+
Sbjct:   192 GHNCEVKRALSKQ 204


>UNIPROTKB|F1M5L3 [details] [associations]
            symbol:F1M5L3 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC128353
            EMBL:AC111733 IPI:IPI00358908 Ensembl:ENSRNOT00000041535
            Uniprot:F1M5L3
        Length = 364

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 71/193 (36%), Positives = 108/193 (55%)

Query:   144 KSSGDSGRSTPTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPIT 199
             K  G        G DP       KLF+GGLS++T+ + LRE+F   G +TD ++M+DP T
Sbjct:    14 KGKGRKKERRMEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKRGTLTDCVVMRDPQT 73

Query:   200 QRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGG 256
             + SRGFGF+T +  E V+  +    H +DG+ ++PK A  +    +P      KKIFVGG
Sbjct:    74 KHSRGFGFVTSSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLMVKKIFVGG 133

Query:   257 VSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIK 316
             + +DT    ++ YF ++GK E T+     + ++ RGF FVTF++++ VD I     H I 
Sbjct:   134 IKEDTEEYNLRDYFEKYGKTE-TIEGRQAEWEK-RGFAFVTFDDQDTVDKIVVQKHHTIN 191

Query:   317 NKKVECKKAQPKE 329
                 E K+A  K+
Sbjct:   192 GHNCEVKRALSKQ 204


>UNIPROTKB|F1SHL4 [details] [associations]
            symbol:F1SHL4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
            EMBL:CU468866 Ensembl:ENSSSCT00000002164 OMA:QYGTIVE Uniprot:F1SHL4
        Length = 280

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 76/172 (44%), Positives = 96/172 (55%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVG LSW    + L+ YF  FG V D  I  DP T RSRGFGF+   +  +VEK+L  
Sbjct:    73 KMFVGDLSWSNRKKDLKNYFTKFGEVIDCTIKMDPNTGRSRGFGFVLIKDAASVEKILDQ 132

Query:   223 PIHTLDGKKIDPKHA-TPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
               H L+G  IDP+ A   KN P      KKIFVG    +  A E    F +FG++E   +
Sbjct:   133 KEHRLNGDVIDPEKAKVMKNDP-----VKKIFVG---LNPEATEKNRDFGEFGEIEAIEL 184

Query:   282 LMDQQTKRHRGFGFVTF-ENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              MD ++ + RGF F+TF E EE V  + E  FH I  +K E K AQPKE  Q
Sbjct:   185 PMDPKSNKRRGFVFITFKEEEEPVKKVLEKKFHTISGRKCEIKVAQPKEDYQ 236


>UNIPROTKB|F1Q2T4 [details] [associations]
            symbol:F1Q2T4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03026834
            Ensembl:ENSCAFT00000030325 Uniprot:F1Q2T4
        Length = 290

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 64/170 (37%), Positives = 106/170 (62%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T++E LR +F  +G + D ++M+DP T+ SRGFGF+T+A   TV++V   
Sbjct:    15 KLFIGGLSFETTNESLRSHFEQWGMLRDCVVMRDPNTKHSRGFGFVTYA---TVKEVDAA 71

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP      +KIFVGG+ +DT    ++ YF Q+GK+E  
Sbjct:    72 RSHKVDGRVVEPKRAVSREDSQRPGAHLTVRKIFVGGIKEDTEEHHLRDYFKQYGKIEVI 131

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF  VTF++ +  D I    ++++     E +KA  K+
Sbjct:   132 EIMTDRGSGKKRGFASVTFDDHDK-DKIVIQKYYIVNGHNCEVRKALSKQ 180

 Score = 154 (59.3 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 37/111 (33%), Positives = 65/111 (58%)

Query:   238 TPKNRPKIG-NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFV 296
             T K+   I   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TK  RGFGFV
Sbjct:     1 TSKSESPIEPEQLRKLFIGGLSFETTNESLRSHFEQWGMLRDCVVMRDPNTKHSRGFGFV 60

Query:   297 TFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
             T+   + VD       H +  + VE K+A  +E  Q   A+L V +++ +G
Sbjct:    61 TYATVKEVD---AARSHKVDGRVVEPKRAVSREDSQRPGAHLTV-RKIFVG 107


>UNIPROTKB|F1NSZ7 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104255 EMBL:AADN02043198 EMBL:AADN02043199
            EMBL:AADN02043200 EMBL:AADN02043201 IPI:IPI00576372
            Ensembl:ENSGALT00000008924 ArrayExpress:F1NSZ7 Uniprot:F1NSZ7
        Length = 262

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 63/118 (53%), Positives = 82/118 (69%)

Query:   232 IDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRH 290
             IDPK A P+  +PK+  RTKKIFVGG+S +T+ E+VK YF QFGKV   ++  D++ K  
Sbjct:     1 IDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVTSKILGFDREKKSF 60

Query:   291 RGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPLGL 348
             R FGFVTFE+E++V+ +CEIHFH I NK VECKKAQPKE +        R  + P G+
Sbjct:    61 RWFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 118

 Score = 160 (61.4 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 32/78 (41%), Positives = 48/78 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLS  T+ E +++YF  FG VT  ++  D   +  R FGF+TF   + VEKV ++
Sbjct:    21 KIFVGGLSVNTTVEDVKQYFEQFGKVTSKILGFDREKKSFRWFGFVTFESEDIVEKVCEI 80

Query:   223 PIHTLDGKKIDPKHATPK 240
               H ++ K ++ K A PK
Sbjct:    81 HFHEINNKMVECKKAQPK 98


>UNIPROTKB|F1PVY3 [details] [associations]
            symbol:F1PVY3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03016228
            Ensembl:ENSCAFT00000027434 Uniprot:F1PVY3
        Length = 301

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 65/170 (38%), Positives = 109/170 (64%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +T  ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFE-WGTLTGCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 73

Query:   223 PIHTLDGKKIDPKHATPKNRPKI--GNRT-KKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +   +    + T KKIFVGG+ ++T  + ++ YF ++GK+E  
Sbjct:    74 RPHKVDGRVVEPKRAVSREDSQTLDAHLTVKKIFVGGIKENTE-DHLRDYF-EYGKIEVI 131

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + + RGF FVTF++ + VD I +  +H +     E +KA  K+
Sbjct:   132 EIMTDRGSGKKRGFTFVTFDDHDSVDKIIQ-KYHTVNGHNCEVRKALSKQ 180

 Score = 162 (62.1 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 38/105 (36%), Positives = 63/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F ++G +   V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLQKLFIGGLSFETTDESLRSHF-EWGTLTGCVVMRDPNTKRSRGFGFVTYATVE 65

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    66 EVDAAMNARPHKVDGRVVEPKRAVSREDSQTLDAHLTV-KKIFVG 109

 Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 27/81 (33%), Positives = 50/81 (61%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T  K+FVGG+  + + + LR+YF  +G +  + IM D  + + RGF F+TF + ++V+K+
Sbjct:   102 TVKKIFVGGIK-ENTEDHLRDYFE-YGKIEVIEIMTDRGSGKKRGFTFVTFDDHDSVDKI 159

Query:   220 LKVPIHTLDGKKIDPKHATPK 240
             ++   HT++G   + + A  K
Sbjct:   160 IQ-KYHTVNGHNCEVRKALSK 179


>FB|FBgn0010258 [details] [associations]
            symbol:Rbp4 "RNA-binding protein 4" species:7227 "Drosophila
            melanogaster" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003727
            "single-stranded RNA binding" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=ISS] [GO:0003729 "mRNA binding"
            evidence=ISS;NAS] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0003729
            GO:GO:0003727 Gene3D:3.30.70.330 HSSP:P09651 EMBL:U18401
            ProteinModelPortal:Q24024 SMR:Q24024 IntAct:Q24024 PRIDE:Q24024
            FlyBase:FBgn0010258 eggNOG:NOG289504 InParanoid:Q24024
            OrthoDB:EOG4CNP6S Bgee:Q24024 Uniprot:Q24024
        Length = 428

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 68/182 (37%), Positives = 102/182 (56%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+F+GGLS QT+ E LR +F  FG V D ++++DP++  SRGFGF+T+ +P++VE V + 
Sbjct:    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRA 92

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGN----------------RTKKIFVGGVSQDTSAEEV 266
               HT+D K ++ KHA P+   K G                  +K+IF+GG+ +      V
Sbjct:    93 RPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIV 152

Query:   267 KAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQ 326
             + YFSQFG V    +LMD++T R R FGF+ F +    +       H I    VE K++ 
Sbjct:   153 REYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRST 212

Query:   327 PK 328
              K
Sbjct:   213 QK 214

 Score = 174 (66.3 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 38/98 (38%), Positives = 58/98 (59%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +KIF+GG+S  T+ E ++ +FSQFG V + V+L D  +   RGFGFVT+ + + V+ +  
Sbjct:    32 RKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQR 91

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPLG 347
                H I NK VE K A P++  +    VG   ++G  G
Sbjct:    92 ARPHTIDNKIVETKHALPRQDFKRGGGVGS--VVGSFG 127

 Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 29/80 (36%), Positives = 42/80 (52%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             S ++F+GGL        +REYF  FG V  V ++ D  T R R FGF+ F +P + EK L
Sbjct:   135 SKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKAL 194

Query:   221 KVPIHTLDGKKIDPKHATPK 240
                 H +    ++ K +T K
Sbjct:   195 APRKHWILQTLVEVKRSTQK 214


>UNIPROTKB|F1LZZ2 [details] [associations]
            symbol:F1LZZ2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 IPI:IPI00556964
            Ensembl:ENSRNOT00000044311 OMA:KERREDT Uniprot:F1LZZ2
        Length = 294

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 68/195 (34%), Positives = 110/195 (56%)

Query:   143 GKSSGDSGRSTPTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPI 198
             G+   + GR    G DP       KLF+GGLS++T+   LRE+F  +G +TD ++M+DP 
Sbjct:    15 GERERERGRGME-GHDPKEPEQLRKLFIGGLSFETTDGSLREHFEKWGTLTDCVVMRDPQ 73

Query:   199 TQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNR---PKIGNRTKKIFVG 255
              + SRGF F+T++  E V  V+    H + G  ++PK A  +     P      +KIFVG
Sbjct:    74 RKCSRGFSFVTYSCVEEVGAVMCARPHKVVGCVVEPKRAVSREDSIIPGAHLMVEKIFVG 133

Query:   256 GVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMI 315
             G+ +DT    ++ YF ++GK+E   ++ D+Q+ + RGF FVTF+N + VD + +  +H +
Sbjct:   134 GIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDNHDTVDKVVQ-KYHTV 192

Query:   316 KNKKVECKKAQPKEA 330
                  E K+ +   A
Sbjct:   193 NGHNCEVKEQEMPSA 207


>UNIPROTKB|F1SCL3 [details] [associations]
            symbol:LOC100522980 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:CU986279
            RefSeq:XP_003123190.1 Ensembl:ENSSSCT00000014811 GeneID:100522980
            KEGG:ssc:100522980 Uniprot:F1SCL3
        Length = 354

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 60/173 (34%), Positives = 103/173 (59%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL  +T  E LR Y+  +G +TD ++++DP +QRSRGFGF+ F+    V+  +  
Sbjct:    22 KLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ +  K   P+    +P     TKK+FVGG+ +DT+   ++ YF ++G ++  
Sbjct:    82 RPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFERYGTIDAI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++  +Q+ R   FGFVTF++ + VD I    +H I     + +KA  ++ +Q
Sbjct:   142 EII--RQSGRKTAFGFVTFDDHDPVDKIVLQKYHTINGHHAQLEKALSRQGMQ 192

 Score = 156 (60.0 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 29/90 (32%), Positives = 51/90 (56%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K + +   + +K+F+GG+  +T  E ++ Y+ Q+GK+ + V++ D  ++R RGFGFV F 
Sbjct:    11 KKKKRESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFS 70

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +   VD       H I  + V  K+  P+E
Sbjct:    71 SVAEVDAAMAARPHSIDGRVVASKRVVPRE 100

 Score = 131 (51.2 bits), Expect = 8.7e-06, P = 8.7e-06
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T+ KLFVGG+   T+   LR+YF  +G +  + I++   + R   FGF+TF + + V+K+
Sbjct:   110 TTKKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIRQ--SGRKTAFGFVTFDDHDPVDKI 167

Query:   220 LKVPIHTLDG 229
             +    HT++G
Sbjct:   168 VLQKYHTING 177


>UNIPROTKB|F1SCM6 [details] [associations]
            symbol:LOC100522063 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:CU986279
            RefSeq:XP_003123185.1 Ensembl:ENSSSCT00000014807 GeneID:100522063
            KEGG:ssc:100522063 Uniprot:F1SCM6
        Length = 354

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 60/173 (34%), Positives = 103/173 (59%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL  +T  E LR Y+  +G +TD ++++DP +QRSRGFGF+ F+    V+  +  
Sbjct:    22 KLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAEVDAAMAA 81

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H++DG+ +  K   P+    +P     TKK+FVGG+ +DT+   ++ YF ++G ++  
Sbjct:    82 RPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFERYGTIDAI 141

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++  +Q+ R   FGFVTF++ + VD I    +H I     + +KA  ++ +Q
Sbjct:   142 EII--RQSGRKTAFGFVTFDDHDPVDKIVLQKYHTINGHHAQLEKALSRQGMQ 192

 Score = 156 (60.0 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 29/90 (32%), Positives = 51/90 (56%)

Query:   240 KNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFE 299
             K + +   + +K+F+GG+  +T  E ++ Y+ Q+GK+ + V++ D  ++R RGFGFV F 
Sbjct:    11 KKKKRESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFS 70

Query:   300 NEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +   VD       H I  + V  K+  P+E
Sbjct:    71 SVAEVDAAMAARPHSIDGRVVASKRVVPRE 100

 Score = 131 (51.2 bits), Expect = 8.7e-06, P = 8.7e-06
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T+ KLFVGG+   T+   LR+YF  +G +  + I++   + R   FGF+TF + + V+K+
Sbjct:   110 TTKKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIRQ--SGRKTAFGFVTFDDHDPVDKI 167

Query:   220 LKVPIHTLDG 229
             +    HT++G
Sbjct:   168 VLQKYHTING 177


>UNIPROTKB|E2RJI3 [details] [associations]
            symbol:LOC608729 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K12741 InterPro:IPR021662 Pfam:PF11627
            GeneTree:ENSGT00550000074566 EMBL:AAEX03015120 RefSeq:XP_864182.2
            ProteinModelPortal:E2RJI3 Ensembl:ENSCAFT00000015269 GeneID:608729
            KEGG:cfa:608729 Uniprot:E2RJI3
        Length = 321

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 67/171 (39%), Positives = 100/171 (58%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+ GLS +T+ E LR +    GA+ D ++M+DP T+ SRGFGF T+A  E V+ V+  
Sbjct:    15 KLFIKGLSSKTTDESLRSHCEQQGALMDCVVMRDPNTKHSRGFGFTTYATREDVDAVMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYF-SQFGKVEE 278
               H +DG+ ++PK A  +    RP      KKIFVGG+ +DT    +K YF  Q+ K+E 
Sbjct:    75 RPHKMDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLKDYFFEQYEKIEV 134

Query:   279 TVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
               ++ D+ + + RGF FVTF++ + VD I     H +     E +KA  K+
Sbjct:   135 IEIMTDRGSGKKRGFAFVTFDDHDFVDKIVIQKCHPVNGHDHEVRKALSKQ 185

 Score = 147 (56.8 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 35/105 (33%), Positives = 58/105 (55%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   +  K+F+ G+S  T+ E ++++  Q G + + V++ D  TK  RGFGF T+   E
Sbjct:     7 PKEPEQLWKLFIKGLSSKTTDESLRSHCEQQGALMDCVVMRDPNTKHSRGFGFTTYATRE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD +     H +  + VE K+A  +E  Q   A+L V K++ +G
Sbjct:    67 DVDAVMNARPHKMDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVG 110

 Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
 Identities = 31/97 (31%), Positives = 50/97 (51%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYF-GMFGAVTDVLIMKDPITQRSR 203
             S  DS R  P G   T  K+FVGG+   T    L++YF   +  +  + IM D  + + R
Sbjct:    91 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLKDYFFEQYEKIEVIEIMTDRGSGKKR 147

Query:   204 GFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             GF F+TF + + V+K++    H ++G   + + A  K
Sbjct:   148 GFAFVTFDDHDFVDKIVIQKCHPVNGHDHEVRKALSK 184


>UNIPROTKB|D6RAF8 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
            HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956 Pfam:PF08143
            IPI:IPI00965952 ProteinModelPortal:D6RAF8 SMR:D6RAF8
            Ensembl:ENST00000507010 ArrayExpress:D6RAF8 Bgee:D6RAF8
            Uniprot:D6RAF8
        Length = 221

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 68/153 (44%), Positives = 92/153 (60%)

Query:   144 KSSGDSGRS--TPTGDDPTSA-----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKD 196
             K+  D G S  +P   +  +A     K+F+GGLSW T+ + L++YF  FG V D  +  D
Sbjct:    72 KNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131

Query:   197 PITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGG 256
             PIT RSRGFGF+ F E E+V+KV+    H L+GK IDPK A      K     KKIFVGG
Sbjct:   132 PITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGG 188

Query:   257 VSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKR 289
             +S DT  E+++ YF  FG+VE   + MD +T +
Sbjct:   189 LSPDTPEEKIREYFGGFGEVESIELPMDNKTNK 221

 Score = 170 (64.9 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 36/91 (39%), Positives = 58/91 (63%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S DT+ +++K YFS+FG+V +  + +D  T R RGFGFV F+  E VD + + 
Sbjct:    98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157

Query:   311 HFHMIKNKKVECKKAQP---KEAVQANLLVG 338
               H +  K ++ K+A+    KE V+  + VG
Sbjct:   158 KEHKLNGKVIDPKRAKAMKTKEPVK-KIFVG 187


>UNIPROTKB|F1LYB2 [details] [associations]
            symbol:F1LYB2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00563016
            Ensembl:ENSRNOT00000051535 Uniprot:F1LYB2
        Length = 261

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 66/184 (35%), Positives = 109/184 (59%)

Query:   156 GDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             G DP  +    KLF+G LS++T+ + LRE+   +  +TD ++M+DP+ +RS GFGF+T++
Sbjct:    14 GHDPKESEHLTKLFIGYLSFETTDDSLREHSEKW-TLTDCVVMRDPLFERSSGFGFVTYS 72

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNR--TKKIFVGGVSQDTSAEEVKAY 269
               E V+  +    H +DG+ + P+  + ++  K G     KKIFVGGV +D     +K Y
Sbjct:    73 CVEEVDAAMCARPHKVDGRVVGPRAVSREDSVKPGTHLTVKKIFVGGVREDREEYNLKDY 132

Query:   270 FSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             F ++GK+    ++ D+Q+ + RGF FVTF++ + VD I    +H I     E KK   K+
Sbjct:   133 FEKYGKIGTIDVMEDRQSGKKRGFAFVTFDDLDTVDKIAVQKYHTINGHNCEMKKVLSKQ 192

Query:   330 AVQA 333
              +Q+
Sbjct:   193 GMQS 196

 Score = 139 (54.0 bits), Expect = 4.7e-07, P = 4.7e-07
 Identities = 28/89 (31%), Positives = 47/89 (52%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+        L++YF  +G +  + +M+D  + + RGF F+TF 
Sbjct:   103 SVKPGTHLTVKKIFVGGVREDREEYNLKDYFEKYGKIGTIDVMEDRQSGKKRGFAFVTFD 162

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K+     HT++G   + K    K
Sbjct:   163 DLDTVDKIAVQKYHTINGHNCEMKKVLSK 191


>UNIPROTKB|F1LW71 [details] [associations]
            symbol:F1LW71 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 IPI:IPI00563710 ProteinModelPortal:F1LW71
            Ensembl:ENSRNOT00000048553 Uniprot:F1LW71
        Length = 260

 Score = 294 (108.6 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 62/170 (36%), Positives = 99/170 (58%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF GGL+++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V++    
Sbjct:    22 KLFTGGLNFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAPVEEVDR---- 77

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               HT   +++    A  +     P      KKIFVGG+ +DT    ++ Y  Q+GK+E  
Sbjct:    78 KDHTRWMEELWNLRAVSREDSQTPGAHLTVKKIFVGGIKEDTEEHHLRDYSEQYGKIEVV 137

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D+ + +  GF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   138 EIMTDRGSGKKGGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 187

 Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 24/56 (42%), Positives = 40/56 (71%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVD 305
             +K+F GG++ +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E VD
Sbjct:    21 RKLFTGGLNFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAPVEEVD 76

 Score = 134 (52.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
 Identities = 30/88 (34%), Positives = 48/88 (54%)

Query:   153 TPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAE 212
             TP G   T  K+FVGG+   T    LR+Y   +G +  V IM D  + +  GF F+TF +
Sbjct:   100 TP-GAHLTVKKIFVGGIKEDTEEHHLRDYSEQYGKIEVVEIMTDRGSGKKGGFAFVTFDD 158

Query:   213 PETVEKVLKVPIHTLDGKKIDPKHATPK 240
              ++V+K++    HT++G   + + A  K
Sbjct:   159 HDSVDKIVIQKYHTVNGHNCEVRKALSK 186

 Score = 37 (18.1 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query:   123 KLFVGGLN 130
             KLF GGLN
Sbjct:    22 KLFTGGLN 29


>UNIPROTKB|F1M0H6 [details] [associations]
            symbol:F1M0H6 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00766574
            Ensembl:ENSRNOT00000044621 Uniprot:F1M0H6
        Length = 360

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 75/197 (38%), Positives = 113/197 (57%)

Query:   143 GKSSGDSG----RSTPTGDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIM 194
             G    DSG    R    G DP       KLF+GGLS++T+ + LRE+F   G +TD ++M
Sbjct:     5 GLPQPDSGHRCHRRWKRGADPKEPEQLRKLFIGGLSFETADDSLREHFKKRGTLTDCVVM 64

Query:   195 KDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK-NRPKIGNR--TKK 251
             +DP T+ SRGFGF+T++  E V+  +   +H +DG+ ++PK A  + +  K+G     KK
Sbjct:    65 RDPQTKCSRGFGFVTYSCVEEVDAAMCAWLHKVDGRVVEPKKAVSREDSVKLGAHLMVKK 124

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
              FVGG+ +DT    +K YF ++GK+E T  + ++Q+ R RGF F  F + +V   + + H
Sbjct:   125 TFVGGIKEDTEEYNLKDYFEKYGKIE-TEGMENRQSGR-RGFAFAIFGDHDVDKIVVQKH 182

Query:   312 FHMIKNKKVECKKAQPK 328
              H I     E KKA  K
Sbjct:   183 -HTINGHNCEVKKALSK 198

 Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
 Identities = 38/105 (36%), Positives = 63/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ + ++ +F + G + + V++ D QTK  RGFGFVT+   E
Sbjct:    25 PKEPEQLRKLFIGGLSFETADDSLREHFKKRGTLTDCVVMRDPQTKCSRGFGFVTYSCVE 84

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKE-AVQ--ANLLVGKRVILG 344
              VD       H +  + VE KKA  +E +V+  A+L+V K  + G
Sbjct:    85 EVDAAMCAWLHKVDGRVVEPKKAVSREDSVKLGAHLMVKKTFVGG 129


>UNIPROTKB|E2RJS4 [details] [associations]
            symbol:E2RJS4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03011786
            Ensembl:ENSCAFT00000024319 Uniprot:E2RJS4
        Length = 330

 Score = 289 (106.8 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 67/193 (34%), Positives = 106/193 (54%)

Query:   158 DPTSA-KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETV 216
             DP    KLF+GGLS++T++E LR +F   G +TD + M+DP T+ SRGFGF+T+A  E V
Sbjct:    23 DPEQLQKLFIGGLSFETTNESLRSHFEQLGMLTDCVEMRDPNTKHSRGFGFVTYATMEEV 82

Query:   217 EKVLKVPIHTLDGKKIDPKHATPKN---RPKIG-NRTKKIFVGGVSQDTSAEE--VKAYF 270
             +       H +D + ++PK A  +    RP       KK        D + EE  ++ YF
Sbjct:    83 DAATNARPHKVD-RVVEPKRAVSREDSQRPGAHLTMKKKEEEEEEEDDNNTEEYHLRDYF 141

Query:   271 SQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEA 330
              Q+GK+E   ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+ 
Sbjct:   142 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQE 201

Query:   331 VQANLLVGKRVIL 343
             + +      +V+L
Sbjct:   202 MASASAKEAKVVL 214

 Score = 156 (60.0 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 36/101 (35%), Positives = 59/101 (58%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q G + + V + D  TK  RGFGFVT+   E
Sbjct:    21 PKDPEQLQKLFIGGLSFETTNESLRSHFEQLGMLTDCVEMRDPNTKHSRGFGFVTYATME 80

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKR 340
              VD       H + ++ VE K+A  +E  Q   A+L + K+
Sbjct:    81 EVDAATNARPHKV-DRVVEPKRAVSREDSQRPGAHLTMKKK 120

 Score = 37 (18.1 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query:   118 DPTSA-KLFVGGLN 130
             DP    KLF+GGL+
Sbjct:    23 DPEQLQKLFIGGLS 36


>UNIPROTKB|E2RF95 [details] [associations]
            symbol:E2RF95 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03008728
            Ensembl:ENSCAFT00000001067 OMA:CTTATVE Uniprot:E2RF95
        Length = 308

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 67/184 (36%), Positives = 104/184 (56%)

Query:   151 RSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITF 210
             +S  + D     KLF+GGLS + ++E LR +   +G +TD ++ +DP T+ SRGFGFIT 
Sbjct:     3 KSESSKDPEQLRKLFIGGLSLEITNESLRSHSEQWGMLTDRVVRRDPNTKGSRGFGFITC 62

Query:   211 --AEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEE 265
               A  E V+  +    H +DG+ ++PK A  +    RP      KK FVGG+ +DT    
Sbjct:    63 TTATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKTFVGGIKEDTEEHH 122

Query:   266 VKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKA 325
             ++ YF Q+GK+E   +++D  + + R F FVTF++ + VD I    +H +     E KKA
Sbjct:   123 LRDYFEQYGKIEVIEIMIDPGSGK-RSFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVKKA 181

Query:   326 QPKE 329
               K+
Sbjct:   182 LSKQ 185

 Score = 130 (50.8 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
 Identities = 33/100 (33%), Positives = 54/100 (54%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEV--VDHI 307
             +K+F+GG+S + + E ++++  Q+G + + V+  D  TK  RGFGF+T     V  VD  
Sbjct:    14 RKLFIGGLSLEITNESLRSHSEQWGMLTDRVVRRDPNTKGSRGFGFITCTTATVEEVDAA 73

Query:   308 CEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
                  H +  + VE K+A  +E  Q   A+L V K  + G
Sbjct:    74 MNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKTFVGG 113

 Score = 39 (18.8 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query:   111 RSTPTGDDPTSAKLFVGGLNV 131
             +S  + D     KLF+GGL++
Sbjct:     3 KSESSKDPEQLRKLFIGGLSL 23


>UNIPROTKB|F1M4M4 [details] [associations]
            symbol:F1M4M4 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 IPI:IPI00558004
            Ensembl:ENSRNOT00000049169 Uniprot:F1M4M4
        Length = 255

 Score = 285 (105.4 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 56/167 (33%), Positives = 96/167 (57%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +  +   ++M+DP T+RSRG GF T+   E ++  +  
Sbjct:    20 KLFIGGLSFRTTEESLRSHFEQWATLITCVVMRDPNTERSRGSGFDTYTTVEEMDAAMNA 79

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H +DG+ +  + +    RP   + T KIF+ G+ +DT    ++ YF Q+ K+E   ++
Sbjct:    80 RPHKVDGRVVSREDS---QRPG-AHLTVKIFISGIKEDTEEHHLRDYFEQYRKIEVIEIM 135

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              D+ +++ R F FVTF+  + VD I    +H +     E +KA  K+
Sbjct:   136 TDRGSRKKRDFAFVTFDEHDSVDKIFIQKYHTVNGHNCEVRKALSKQ 182

 Score = 127 (49.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
 Identities = 24/80 (30%), Positives = 44/80 (55%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             + K+F+ G+   T    LR+YF  +  +  + IM D  +++ R F F+TF E ++V+K+ 
Sbjct:   102 TVKIFISGIKEDTEEHHLRDYFEQYRKIEVIEIMTDRGSRKKRDFAFVTFDEHDSVDKIF 161

Query:   221 KVPIHTLDGKKIDPKHATPK 240
                 HT++G   + + A  K
Sbjct:   162 IQKYHTVNGHNCEVRKALSK 181

 Score = 114 (45.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 23/77 (29%), Positives = 43/77 (55%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+S  T+ E ++++F Q+  +   V++ D  T+R RG GF T+   E +D    
Sbjct:    19 RKLFIGGLSFRTTEESLRSHFEQWATLITCVVMRDPNTERSRGSGFDTYTTVEEMDAAMN 78

Query:   310 IHFHMIKNKKVECKKAQ 326
                H +  + V  + +Q
Sbjct:    79 ARPHKVDGRVVSREDSQ 95

 Score = 40 (19.1 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query:    31 HHPGLVHLNGPPPPPHQLVKL 51
             HHP ++  +     P QL KL
Sbjct:     1 HHPAIISKSESLKEPEQLRKL 21


>FB|FBgn0004903 [details] [associations]
            symbol:Rb97D "Ribonuclear protein at 97D" species:7227
            "Drosophila melanogaster" [GO:0007286 "spermatid development"
            evidence=IMP] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0007275
            GO:GO:0007286 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            eggNOG:COG0724 GeneTree:ENSGT00700000104255 EMBL:L02106
            EMBL:BT001320 PIR:S33679 PIR:S33680 RefSeq:NP_001014671.1
            RefSeq:NP_001014672.1 RefSeq:NP_001014673.1 RefSeq:NP_001014674.1
            RefSeq:NP_001014675.1 RefSeq:NP_001014676.1 RefSeq:NP_001014677.1
            RefSeq:NP_524520.1 RefSeq:NP_733172.1 UniGene:Dm.22918
            ProteinModelPortal:Q02926 SMR:Q02926 DIP:DIP-18137N IntAct:Q02926
            MINT:MINT-957540 STRING:Q02926 PaxDb:Q02926 PRIDE:Q02926
            EnsemblMetazoa:FBtr0085093 EnsemblMetazoa:FBtr0100337
            EnsemblMetazoa:FBtr0100339 EnsemblMetazoa:FBtr0100340 GeneID:43231
            KEGG:dme:Dmel_CG6354 CTD:43231 FlyBase:FBgn0004903
            InParanoid:Q02926 OMA:DICELEH OrthoDB:EOG43N5VC PhylomeDB:Q02926
            ChiTaRS:Rb97D GenomeRNAi:43231 NextBio:832835 Bgee:Q02926
            GermOnline:CG6354 Uniprot:Q02926
        Length = 471

 Score = 311 (114.5 bits), Expect = 1.2e-27, P = 1.2e-27
 Identities = 67/168 (39%), Positives = 101/168 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGL+  T+ E L+ ++G +G V DV++M+D  T+RSRGFGFIT+ +   V++  + 
Sbjct:    33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN 92

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNR-----TKKIFVGGVSQDTSAEEVKAYFSQFGKVE 277
               H +DGK ++ K A P  RP+  +R      KK+FVGG+  +   E ++ YF QFG V 
Sbjct:    93 RPHIIDGKTVEAKRALP--RPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVV 150

Query:   278 ETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKA 325
                +L D+ T + RGF FV F++ + VD       H IK   V+ KK+
Sbjct:   151 SVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKS 198

 Score = 188 (71.2 bits), Expect = 5.3e-12, P = 5.3e-12
 Identities = 39/100 (39%), Positives = 64/100 (64%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG++  T+ E +K ++ Q+GKV + V++ D  TKR RGFGF+T+    +VD   E
Sbjct:    32 RKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQE 91

Query:   310 IHFHMIKNKKVECKKAQPK---EAVQANLLVGKRVILGPL 346
                H+I  K VE K+A P+   E+ + N+ V K++ +G L
Sbjct:    92 NRPHIIDGKTVEAKRALPRPERESRETNISV-KKLFVGGL 130


>UNIPROTKB|F1M6S2 [details] [associations]
            symbol:F1M6S2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00782238
            ProteinModelPortal:F1M6S2 Ensembl:ENSRNOT00000030712 Uniprot:F1M6S2
        Length = 223

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 67/186 (36%), Positives = 110/186 (59%)

Query:   156 GDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFI-TF 210
             G DP       KLF+G LS++T+ + LRE+F  +G + D ++M+D   +RSR FGF+ T+
Sbjct:     8 GHDPKEPEQLRKLFIGCLSFETTDDSLREHFEKWGTL-DCVVMRDLQIKRSRSFGFVSTY 66

Query:   211 AEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVK 267
             +  + V+  +    H +DG  ++PK A  +    +P      KKIFVGG+ +DT    ++
Sbjct:    67 SCVKEVDAAMCARPHKVDGHVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLR 126

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQP 327
              YF ++GK+E   ++ D+Q+ + RGF FVTF++ + VD I +  +H I     E KKA  
Sbjct:   127 DYFEKYGKIEIIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVQ-KYHTINGHNYEVKKAVS 185

Query:   328 KEAVQA 333
             K+ +Q+
Sbjct:   186 KQEMQS 191

 Score = 153 (58.9 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 31/89 (34%), Positives = 51/89 (57%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LR+YF  +G +  + +M+D  + + RGF F+TF 
Sbjct:    99 SVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIEIIEVMEDRQSGKKRGFAFVTFD 158

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             + +TV+K+++   HT++G   + K A  K
Sbjct:   159 DHDTVDKIVQ-KYHTINGHNYEVKKAVSK 186


>WB|WBGene00019249 [details] [associations]
            symbol:H28G03.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00390000002308 EMBL:FO081568 RefSeq:NP_741783.1
            UniGene:Cel.17692 ProteinModelPortal:H2L0D0 SMR:H2L0D0 PRIDE:H2L0D0
            EnsemblMetazoa:H28G03.1a.1 EnsemblMetazoa:H28G03.1a.2 GeneID:180791
            KEGG:cel:CELE_H28G03.1 CTD:180791 WormBase:H28G03.1a OMA:HIVNERK
            Uniprot:H2L0D0
        Length = 336

 Score = 255 (94.8 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
 Identities = 61/179 (34%), Positives = 96/179 (53%)

Query:   159 PTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEK 218
             P   KLF+GGLS  T+ E+L  YF  +G V D ++++DP T+ SRGFGF+TFA   + E 
Sbjct:    67 PQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAES 126

Query:   219 VLKVPIHTLDGKKIDPKHATPKNR-----PKIGNRTK-----KIFVGGVSQDT-SAEEVK 267
              +    H L GK +D K A P+ +     P     T      K+ + G++    S + ++
Sbjct:   127 AMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLR 186

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHF---HMIKNKKVECK 323
              YF  FG +++ V ++ Q     RG GFV +E++E  D  C  H    H++  +K+E +
Sbjct:   187 VYFETFGTLDQ-VEILGQP----RGLGFVIYEDKESADR-CLAHNSGRHIVNERKIEVR 239

 Score = 167 (63.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+S DT+ E++  YFSQ+G V + +++ D  TK  RGFGFVTF +    +    
Sbjct:    70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129

Query:   310 IHFHMIKNKKVECKKAQPKEAVQA 333
                H +  K V+ K+A P+E + +
Sbjct:   130 DRPHKLGGKTVDSKRAIPREQMSS 153

 Score = 40 (19.1 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query:    21 PTMNGLVQIPHHPGLVHLNGPPPPPHQLVKLNGAPQVN 58
             P +  ++Q    P  +   G PPPP    + NG P ++
Sbjct:     9 PEVAEMIQSGGFPFAMMNRGMPPPP----QWNGYPVIH 42

 Score = 38 (18.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query:   119 PTSAKLFVGGLN 130
             P   KLF+GGL+
Sbjct:    67 PQLRKLFIGGLS 78


>UNIPROTKB|D4ACP9 [details] [associations]
            symbol:D4ACP9 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00388048
            ProteinModelPortal:D4ACP9 Ensembl:ENSRNOT00000002123 Uniprot:D4ACP9
        Length = 253

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 65/172 (37%), Positives = 105/172 (61%)

Query:   162 AKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLK 221
             +KLF+GGLS++TS + LRE+F  +  +T  ++M DP T+RSR FGF+T++  + V+  + 
Sbjct:    13 SKLFIGGLSFETSDDSLREHFEQWDMLTHCVVM-DPQTKRSRVFGFVTYSCVKEVDAAMC 71

Query:   222 VPIHTLDGKKIDPKHATPKN--RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
                H +DG  ++PK    ++  +P +    KKIF+GG+ +DT    ++ YF ++GK+E T
Sbjct:    72 ARPHKVDGCVVEPKRPFREDSVKPVVCLLAKKIFIGGIKEDTEEHNLRDYFEKYGKIE-T 130

Query:   280 VMLM--DQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             + +M  D+Q+   RGF FVTF++   VD I     H I     + KKA  K+
Sbjct:   131 IEIMEEDRQSGEKRGFAFVTFDDHYTVDKIVVQKCHTINRHNCDVKKAPSKQ 182

 Score = 141 (54.7 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 34/105 (32%), Positives = 60/105 (57%)

Query:   241 NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEN 300
             + PK   +  K+F+GG+S +TS + ++ +F Q+  +   V+ MD QTKR R FGFVT+  
Sbjct:     4 HNPKEQEQLSKLFIGGLSFETSDDSLREHFEQWDMLTHCVV-MDPQTKRSRVFGFVTYSC 62

Query:   301 EEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANL-LVGKRVILG 344
              + VD       H +    VE K+   +++V+  + L+ K++ +G
Sbjct:    63 VKEVDAAMCARPHKVDGCVVEPKRPFREDSVKPVVCLLAKKIFIG 107


>UNIPROTKB|F1LVU1 [details] [associations]
            symbol:F1LVU1 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00950080
            Ensembl:ENSRNOT00000064004 Uniprot:F1LVU1
        Length = 188

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 63/173 (36%), Positives = 107/173 (61%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             +LF+GGLS++T  + LRE F M G + D ++M+DP     + FGF+T++  E V+  +  
Sbjct:     8 RLFIGGLSFETIEDSLREGFEM-GTLADCVVMRDP-----QSFGFVTYSCVEEVDAAMCA 61

Query:   223 PIHTLDGKKIDPKHATPK-NRPKIG-NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
               H +DG+ ++PK A  + +  K G + T KIFVGG+ +D     ++ YF ++GK+E   
Sbjct:    62 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKIFVGGIKEDAEEYNLRDYFEKYGKIETIE 121

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
             ++ D+Q+ + RGF FVTF++ + VD I  +++H I     E +KA  K+ +Q+
Sbjct:   122 VMEDRQSGKKRGFAFVTFDDHDTVDKIV-VNYHTINGHNCEVRKALSKQEMQS 173

 Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 27/80 (33%), Positives = 48/80 (60%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             + K+FVGG+        LR+YF  +G +  + +M+D  + + RGF F+TF + +TV+K++
Sbjct:    90 TVKIFVGGIKEDAEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 149

Query:   221 KVPIHTLDGKKIDPKHATPK 240
              V  HT++G   + + A  K
Sbjct:   150 -VNYHTINGHNCEVRKALSK 168


>UNIPROTKB|F1MW51 [details] [associations]
            symbol:F1MW51 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 EMBL:DAAA02008023 IPI:IPI00696055
            Ensembl:ENSBTAT00000016590 Uniprot:F1MW51
        Length = 274

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 65/170 (38%), Positives = 102/170 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR  F   G +TD ++ +DP  +RSRGFGF+T+A   TVE+V   
Sbjct:    15 KLFIGGLSFETTDESLRSRFEQGGTLTDCVVRRDPNAKRSRGFGFVTYA---TVEEVKGR 71

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
             P H +D + ++PK A  +    RP      KK+FVGG+ +DT    ++ YF Q+G++E  
Sbjct:    72 P-H-VDERVVEPKWAISREDSQRPGAHLPVKKVFVGGIKEDTEEHHLRDYFEQYGRIEVI 129

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ DQ + + RGF F+ F++ + +D I    +H       E +KA  K+
Sbjct:   130 EIMTDQGSGK-RGFAFILFDDHDSIDKIVIQKYHTGNGLNCEVRKALSKQ 178

 Score = 134 (52.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 35/112 (31%), Positives = 57/112 (50%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P    P   K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    86 SREDSQR--PGAHLPVK-KVFVGGIKEDTEEHHLRDYFEQYGRIEVIEIMTDQGSGK-RG 141

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGG 256
             F FI F + ++++K++    HT +G   + + A  K      + +++ F GG
Sbjct:   142 FAFILFDDHDSIDKIVIQKYHTGNGLNCEVRKALSKQEMASASSSQRDFGGG 193

 Score = 129 (50.5 bits), Expect = 8.1e-06, P = 8.1e-06
 Identities = 38/105 (36%), Positives = 58/105 (55%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E +++ F Q G + + V+  D   KR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSRFEQGGTLTDCVVRRDPNAKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              V      H   +  + VE K A  +E  Q   A+L V K+V +G
Sbjct:    67 EVKG--RPH---VDERVVEPKWAISREDSQRPGAHLPV-KKVFVG 105


>UNIPROTKB|D4ABW2 [details] [associations]
            symbol:D4ABW2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 IPI:IPI00781059 ProteinModelPortal:D4ABW2
            Ensembl:ENSRNOT00000044642 Uniprot:D4ABW2
        Length = 279

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 68/171 (39%), Positives = 99/171 (57%)

Query:   163 KLFVGGLSWQTSSEKLR--EYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             KLFVGGLS++ + E L    +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +
Sbjct:    15 KLFVGGLSFEATLESLSLTSHFEQWGTLTDHVVMRDPNTKRSRGFGFVTYATVEEVDAAM 74

Query:   221 KVPIHTLDGKKIDPKHATPKN--RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEE 278
                 H + G+ ++PK A  K+  RP      KKIFVGGV +DT    ++ Y  Q GK E 
Sbjct:    75 NARPHKVGGRAVEPKRAGSKDSQRPGAHLTMKKIFVGGVKEDTEEHRLRDYLEQNGKTEV 134

Query:   279 TVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             T +  D+ + + R F FVTF+N   VD I    +  +     E +KA  K+
Sbjct:   135 TEITTDRGSGK-RDFAFVTFDNS--VDKIVIQKYSTVNGHNCEVRKALSKQ 182

 Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 34/98 (34%), Positives = 57/98 (58%)

Query:   250 KKIFVGGVSQDTSAEEVK--AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHI 307
             +K+FVGG+S + + E +   ++F Q+G + + V++ D  TKR RGFGFVT+   E VD  
Sbjct:    14 QKLFVGGLSFEATLESLSLTSHFEQWGTLTDHVVMRDPNTKRSRGFGFVTYATVEEVDAA 73

Query:   308 CEIHFHMIKNKKVECKKAQPKEAVQANL-LVGKRVILG 344
                  H +  + VE K+A  K++ +    L  K++ +G
Sbjct:    74 MNARPHKVGGRAVEPKRAGSKDSQRPGAHLTMKKIFVG 111


>UNIPROTKB|F1M6C7 [details] [associations]
            symbol:F1M6C7 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 IPI:IPI00370270
            Ensembl:ENSRNOT00000014756 Uniprot:F1M6C7
        Length = 273

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 60/175 (34%), Positives = 99/175 (56%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T++E LR +F  +  +TD + M+DP T+RSRGFGF+T+   E V+  +  
Sbjct:     6 KLFIGGLSFKTTNESLRSHFEQWRTLTDCVEMRDPNTKRSRGFGFVTYTTVEEVDAAMNA 65

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG  ++PK A  +     P      K+I VGG+ +DT    ++ YF  +GK+E  
Sbjct:    66 RPHKVDGSFVEPKRAVSREDSQSPGAHLTVKEISVGGIKEDTEEHHLRDYFEHYGKIEVI 125

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQAN 334
              ++ D+ + + + F FVTF++ + VD I    +H +     E      +E   A+
Sbjct:   126 EIMTDRGSGK-KEFAFVTFDDHDSVDKIVIQKYHTVNGHNCETVALSKQEMASAS 179

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 36/98 (36%), Positives = 56/98 (57%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+S  T+ E ++++F Q+  + + V + D  TKR RGFGFVT+   E VD    
Sbjct:     5 RKLFIGGLSFKTTNESLRSHFEQWRTLTDCVEMRDPNTKRSRGFGFVTYTTVEEVDAAMN 64

Query:   310 IHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
                H +    VE K+A  +E  Q   A+L V K + +G
Sbjct:    65 ARPHKVDGSFVEPKRAVSREDSQSPGAHLTV-KEISVG 101


>UNIPROTKB|D4AB76 [details] [associations]
            symbol:D4AB76 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 IPI:IPI00558881 ProteinModelPortal:D4AB76
            Ensembl:ENSRNOT00000043240 Uniprot:D4AB76
        Length = 306

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 65/178 (36%), Positives = 101/178 (56%)

Query:   151 RSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITF 210
             +S  T +     KLF+GGLS++T+ E LR +F  +G +TD  +M+DP  + SRGFGF+T+
Sbjct:     3 KSESTKEPEQLWKLFIGGLSFKTTDESLRSHFEQWGTLTDC-VMRDPNNKISRGFGFVTY 61

Query:   211 AEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVK 267
                E ++  +    H +DG  ++PK A  +    RP      KKIFVG V +DT      
Sbjct:    62 TTVEELDAAMNARPHKVDGGVVEPKRAVSREDSPRPGAHLTVKKIFVG-VKEDTEGH--- 117

Query:   268 AYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKA 325
              +F Q+GK+E   ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA
Sbjct:   118 -HFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDPDSVDTIVIQKYHTVNGHNCEVRKA 174

 Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S  T+ E ++++F Q+G + + VM  D   K  RGFGFVT+   E +D     
Sbjct:    15 KLFIGGLSFKTTDESLRSHFEQWGTLTDCVM-RDPNNKISRGFGFVTYTTVEELDAAMNA 73

Query:   311 HFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
               H +    VE K+A  +E      A+L V K++ +G
Sbjct:    74 RPHKVDGGVVEPKRAVSREDSPRPGAHLTV-KKIFVG 109


>UNIPROTKB|F1N9H6 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005844 "polysome" evidence=IEA] [GO:0008266 "poly(U) RNA
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
            EMBL:AADN02043198 EMBL:AADN02043199 EMBL:AADN02043200
            EMBL:AADN02043201 IPI:IPI00818302 ProteinModelPortal:F1N9H6
            Ensembl:ENSGALT00000011697 ArrayExpress:F1N9H6 Uniprot:F1N9H6
        Length = 273

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 61/118 (51%), Positives = 78/118 (66%)

Query:   232 IDPKHATPKN-RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRH 290
             IDPK A P+  +PK+  RTKKIFVGG+S +T+ E+VK YF QFGKV     +  +     
Sbjct:     1 IDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVSLLSGVGSKSFAFS 60

Query:   291 RGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILGPLGL 348
              GFGFVTFE+E++V+ +CEIHFH I NK VECKKAQPKE +        R  + P G+
Sbjct:    61 SGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 118

 Score = 149 (57.5 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLS  T+ E +++YF  FG V+ +  +       S GFGF+TF   + VEKV ++
Sbjct:    21 KIFVGGLSVNTTVEDVKQYFEQFGKVSLLSGVGSKSFAFSSGFGFVTFESEDIVEKVCEI 80

Query:   223 PIHTLDGKKIDPKHATPK 240
               H ++ K ++ K A PK
Sbjct:    81 HFHEINNKMVECKKAQPK 98


>UNIPROTKB|D6RF44 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
            HGNC:HGNC:5036 ChiTaRS:HNRNPD IPI:IPI00967562
            ProteinModelPortal:D6RF44 SMR:D6RF44 Ensembl:ENST00000515432
            ArrayExpress:D6RF44 Bgee:D6RF44 Uniprot:D6RF44
        Length = 112

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 58/114 (50%), Positives = 75/114 (65%)

Query:   164 LFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVP 223
             +F+GGLSW T+ + L++YF  FG V D  +  DPIT RSRGFGF+ F E E+V+KV+   
Sbjct:     1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60

Query:   224 IHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVE 277
              H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  FG+VE
Sbjct:    61 EHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVE 111

 Score = 165 (63.1 bits), Expect = 9.0e-12, P = 9.0e-12
 Identities = 35/90 (38%), Positives = 57/90 (63%)

Query:   252 IFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIH 311
             +F+GG+S DT+ +++K YFS+FG+V +  + +D  T R RGFGFV F+  E VD + +  
Sbjct:     1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60

Query:   312 FHMIKNKKVECKKAQP---KEAVQANLLVG 338
              H +  K ++ K+A+    KE V+  + VG
Sbjct:    61 EHKLNGKVIDPKRAKAMKTKEPVK-KIFVG 89

 Score = 93 (37.8 bits), Expect = 0.00068, P = 0.00068
 Identities = 22/48 (45%), Positives = 26/48 (54%)

Query:   141 VNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAV 188
             +NGK             +P   K+FVGGLS  T  EK+REYFG FG V
Sbjct:    64 LNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEV 110


>UNIPROTKB|D4A6Z0 [details] [associations]
            symbol:D4A6Z0 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00948011
            ProteinModelPortal:D4A6Z0 Ensembl:ENSRNOT00000067831 Uniprot:D4A6Z0
        Length = 176

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 60/159 (37%), Positives = 99/159 (62%)

Query:   156 GDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             G DP       KLF+GGLS++T+ + LRE+F  +  +TD ++M+DP T+RSRGFGF+ ++
Sbjct:     3 GHDPKEPEQRRKLFIGGLSFETTDDSLREHF-KWDTLTDCVVMRDPQTERSRGFGFV-YS 60

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKA 268
               E V+  +    H +DG  ++PK A  +    +P      KKIFVGG+ +DT    ++ 
Sbjct:    61 CVEEVDAAMCARPHKVDGHVVEPKRAISREDSVKPGAHLMVKKIFVGGIKEDTEEYNLRD 120

Query:   269 YFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHI 307
             YF ++G ++   ++ D+Q+ + RGF F+TF++ + VD I
Sbjct:   121 YF-EYGNIKTIEVVEDRQSGKKRGFAFLTFDDHDTVDKI 158

 Score = 135 (52.6 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 36/105 (34%), Positives = 65/105 (61%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ + ++ +F ++  + + V++ D QT+R RGFGFV    EE
Sbjct:     6 PKEPEQRRKLFIGGLSFETTDDSLREHF-KWDTLTDCVVMRDPQTERSRGFGFVYSCVEE 64

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKE-AVQ--ANLLVGKRVILG 344
             V   +C    H +    VE K+A  +E +V+  A+L+V K++ +G
Sbjct:    65 VDAAMCA-RPHKVDGHVVEPKRAISREDSVKPGAHLMV-KKIFVG 107

 Score = 115 (45.5 bits), Expect = 5.5e-05, P = 5.5e-05
 Identities = 21/58 (36%), Positives = 38/58 (65%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             K+FVGG+   T    LR+YF  +G +  + +++D  + + RGF F+TF + +TV+K++
Sbjct:   103 KIFVGGIKEDTEEYNLRDYFE-YGNIKTIEVVEDRQSGKKRGFAFLTFDDHDTVDKIV 159


>UNIPROTKB|D4A8U2 [details] [associations]
            symbol:D4A8U2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00947740
            ProteinModelPortal:D4A8U2 Ensembl:ENSRNOT00000064543
            ArrayExpress:D4A8U2 Uniprot:D4A8U2
        Length = 196

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 57/159 (35%), Positives = 97/159 (61%)

Query:   156 GDDPTSA----KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             G DP       KLF+GGLS++ + + LRE+F  +G +TD ++M+DP T+RSR F F+T++
Sbjct:     3 GHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYS 62

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKA 268
               + V+  +    H +DG+ ++PK A  +    +P      KKIFVGG+ +DT    ++ 
Sbjct:    63 CVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122

Query:   269 YFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHI 307
             YF ++GK++   ++ D+ + + R   FVTF++ + VD I
Sbjct:   123 YFEKYGKIKTMEVMEDRLSGKERLL-FVTFDDHDTVDKI 160

 Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 34/105 (32%), Positives = 63/105 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S + + + ++ +F ++G + + V++ D QTKR R F FVT+   +
Sbjct:     6 PKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVK 65

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKE-AVQ--ANLLVGKRVILG 344
              VD       H +  + VE K+A  +E +V+  A+L V K++ +G
Sbjct:    66 EVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTV-KKIFVG 109

 Score = 111 (44.1 bits), Expect = 0.00034, P = 0.00034
 Identities = 23/69 (33%), Positives = 40/69 (57%)

Query:   152 STPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFA 211
             S   G   T  K+FVGG+   T    LR+YF  +G +  + +M+D ++ + R   F+TF 
Sbjct:    94 SVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLSGKERLL-FVTFD 152

Query:   212 EPETVEKVL 220
             + +TV+K++
Sbjct:   153 DHDTVDKIV 161


>UNIPROTKB|E2QXH4 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 EMBL:AAEX03009384
            ProteinModelPortal:E2QXH4 Ensembl:ENSCAFT00000004613 Uniprot:E2QXH4
        Length = 301

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 51/142 (35%), Positives = 87/142 (61%)

Query:   194 MKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTK 250
             M+DP ++RSRGFGF+TF+    V+  +    H++DG+ ++PK A  +    +P      K
Sbjct:     1 MRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVK 60

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+FVGG+ +DT    ++ YF ++GK++   ++ D+Q+ + RGFGFVTF++ + VD I   
Sbjct:    61 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 120

Query:   311 HFHMIKNKKVECKKAQPKEAVQ 332
              +H I     E +KA  ++ +Q
Sbjct:   121 KYHTINGHNAEVRKALSRQEMQ 142

 Score = 149 (57.5 bits), Expect = 5.2e-08, P = 5.2e-08
 Identities = 32/90 (35%), Positives = 52/90 (57%)

Query:   148 DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGF 207
             +SG+  P G   T  KLFVGG+   T    LR+YF  +G +  + I+ D  + + RGFGF
Sbjct:    49 ESGK--P-GAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGF 105

Query:   208 ITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             +TF + + V+K++    HT++G   + + A
Sbjct:   106 VTFDDHDPVDKIVLQKYHTINGHNAEVRKA 135


>GENEDB_PFALCIPARUM|PFD0700c [details] [associations]
            symbol:PFD0700c "RNA binding protein, putative"
            species:5833 "Plasmodium falciparum" [GO:0016070 "RNA metabolic
            process" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016070 EMBL:AL844503
            HSSP:Q14103 RefSeq:XP_001351452.1 ProteinModelPortal:Q8I1U3
            EnsemblProtists:PFD0700c:mRNA GeneID:812564 KEGG:pfa:PFD0700c
            EuPathDB:PlasmoDB:PF3D7_0414500 HOGENOM:HOG000282694
            ProtClustDB:CLSZ2431852 Uniprot:Q8I1U3
        Length = 358

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 60/167 (35%), Positives = 101/167 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K F+GG+    +S+ + EYF  +G V  V+I +D  T+R+RGF F+T A     E++L+ 
Sbjct:   115 KFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQDHETKRNRGFAFVTMASHINKERILR- 173

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H L+GK++D +    +N     +  +KIFVGG++   + + +++YFS FG+++   ++
Sbjct:   174 DTHELNGKRVDVRE---ENNTTPSDIQRKIFVGGLNYYWTKDTLESYFSTFGEIDVVQIV 230

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +D  + R R FGFV F NE  V  + +   H I +K VE +KA+PK+
Sbjct:   231 LDS-SGRSRCFGFVVFSNENSVAKVLKHKRHKIYDKMVEVRKAEPKK 276

 Score = 143 (55.4 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 32/101 (31%), Positives = 53/101 (52%)

Query:   241 NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEN 300
             N  K  N   K F+GG+ Q  +++ +  YF Q+G V+  V+  D +TKR+RGF FVT  +
Sbjct:   105 NNSKNLNEPFKFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQDHETKRNRGFAFVTMAS 164

Query:   301 EEVVDHICEIHFHMIKNKKVECKKAQ---PKEAVQANLLVG 338
                 + I     H +  K+V+ ++     P + +Q  + VG
Sbjct:   165 HINKERILR-DTHELNGKRVDVREENNTTPSD-IQRKIFVG 203


>UNIPROTKB|Q8I1U3 [details] [associations]
            symbol:PFD0700c "RNA binding protein, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0016070 "RNA
            metabolic process" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016070
            EMBL:AL844503 HSSP:Q14103 RefSeq:XP_001351452.1
            ProteinModelPortal:Q8I1U3 EnsemblProtists:PFD0700c:mRNA
            GeneID:812564 KEGG:pfa:PFD0700c EuPathDB:PlasmoDB:PF3D7_0414500
            HOGENOM:HOG000282694 ProtClustDB:CLSZ2431852 Uniprot:Q8I1U3
        Length = 358

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 60/167 (35%), Positives = 101/167 (60%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K F+GG+    +S+ + EYF  +G V  V+I +D  T+R+RGF F+T A     E++L+ 
Sbjct:   115 KFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQDHETKRNRGFAFVTMASHINKERILR- 173

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H L+GK++D +    +N     +  +KIFVGG++   + + +++YFS FG+++   ++
Sbjct:   174 DTHELNGKRVDVRE---ENNTTPSDIQRKIFVGGLNYYWTKDTLESYFSTFGEIDVVQIV 230

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +D  + R R FGFV F NE  V  + +   H I +K VE +KA+PK+
Sbjct:   231 LDS-SGRSRCFGFVVFSNENSVAKVLKHKRHKIYDKMVEVRKAEPKK 276

 Score = 143 (55.4 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 32/101 (31%), Positives = 53/101 (52%)

Query:   241 NRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEN 300
             N  K  N   K F+GG+ Q  +++ +  YF Q+G V+  V+  D +TKR+RGF FVT  +
Sbjct:   105 NNSKNLNEPFKFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQDHETKRNRGFAFVTMAS 164

Query:   301 EEVVDHICEIHFHMIKNKKVECKKAQ---PKEAVQANLLVG 338
                 + I     H +  K+V+ ++     P + +Q  + VG
Sbjct:   165 HINKERILR-DTHELNGKRVDVREENNTTPSD-IQRKIFVG 203


>DICTYBASE|DDB_G0292422 [details] [associations]
            symbol:DDB_G0292422 "RNA-binding region RNP-1
            domain-containing protein" species:44689 "Dictyostelium discoideum"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 dictyBase:DDB_G0292422 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000190 KO:K14411
            eggNOG:NOG289504 RefSeq:XP_629598.1 ProteinModelPortal:Q54D98
            EnsemblProtists:DDB0233639 GeneID:8628658 KEGG:ddi:DDB_G0292422
            InParanoid:Q54D98 OMA:YYEDESS Uniprot:Q54D98
        Length = 687

 Score = 290 (107.1 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 59/186 (31%), Positives = 110/186 (59%)

Query:   141 VNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMK-DPIT 199
             +   ++ D   S  +     S K+FVGGL   +S+E L++YF  FG V + +++K     
Sbjct:    85 IENNNNNDEEGSNLSLPKSISGKIFVGGLLKTSSNEILKDYFSNFGEVKESIVIKATEKA 144

Query:   200 QRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQ 259
              +SRGFGF+TF +P  +++V+ +  H+++GK ++ + A PK       + +K+FVGG+ +
Sbjct:   145 SKSRGFGFVTFVDPSVIDEVILIN-HSIEGKNVEIRRAIPKEEMTEEPKKQKLFVGGLPK 203

Query:   260 DTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKK 319
               ++++   YFS+FG++ E   L+ ++    +GFGF+ F++E V + I     H+I  K+
Sbjct:   204 HITSDDFNNYFSEFGEISE-YNLLTEKNGTIKGFGFICFKDESVNEIILNEQQHIILGKR 262

Query:   320 VECKKA 325
             V+ + A
Sbjct:   263 VDIRIA 268

 Score = 176 (67.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
 Identities = 36/80 (45%), Positives = 56/80 (70%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLM-DQQTKRHRGFGFVTFENEEVVDHICE 309
             KIFVGG+ + +S E +K YFS FG+V+E++++   ++  + RGFGFVTF +  V+D +  
Sbjct:   107 KIFVGGLLKTSSNEILKDYFSNFGEVKESIVIKATEKASKSRGFGFVTFVDPSVIDEVIL 166

Query:   310 IHFHMIKNKKVECKKAQPKE 329
             I+ H I+ K VE ++A PKE
Sbjct:   167 IN-HSIEGKNVEIRRAIPKE 185

 Score = 130 (50.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
 Identities = 32/112 (28%), Positives = 57/112 (50%)

Query:   137 QLVLVNGKSSGDS---GRSTPTGD---DPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTD 190
             +++L+N    G +    R+ P  +   +P   KLFVGGL    +S+    YF  FG +++
Sbjct:   163 EVILINHSIEGKNVEIRRAIPKEEMTEEPKKQKLFVGGLPKHITSDDFNNYFSEFGEISE 222

Query:   191 VLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNR 242
               ++ +      +GFGFI F +    E +L    H + GK++D + A  +N+
Sbjct:   223 YNLLTEK-NGTIKGFGFICFKDESVNEIILNEQQHIILGKRVDIRIADSQNK 273

 Score = 41 (19.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query:    89 DLQPNSNNQLVLVNGKSSGDSGRSTPTGDDPTSAKLFVGGL 129
             ++  N +++  + N  ++ + G S  +     S K+FVGGL
Sbjct:    74 NINNNDSDKNHIENNNNNDEEG-SNLSLPKSISGKIFVGGL 113


>UNIPROTKB|F1LUF2 [details] [associations]
            symbol:F1LUF2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 IPI:IPI00952415
            Ensembl:ENSRNOT00000042380 Uniprot:F1LUF2
        Length = 238

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 61/170 (35%), Positives = 99/170 (58%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++ + E LR +F  +G +T+ ++M+DP T+RS GFGF+T+A  E V+  +  
Sbjct:     1 KLFIGGLSFEKTDEGLRSHFEQWGTLTNSVVMRDPNTKRSGGFGFVTYATVEEVDAAMNE 60

Query:   223 PIHTLDGKKIDPKHATPK-NRPKIGNR--TKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +D + ++PK A  + +  + G     KKIFVG V +DT    ++ YF Q+GK++  
Sbjct:    61 RPHKVDERVLEPKRAVSREDSERTGTHLTVKKIFVGVVKEDTEEHHLRDYFEQYGKIQ-- 118

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
                  +Q K+  GF F TF++ + VD I    +H +     E +K   K+
Sbjct:   119 -----RQWKKE-GFCFFTFDDHDSVDKIVIQKYHTVGGHTCEVRKPLSKQ 162


>TAIR|locus:2115169 [details] [associations]
            symbol:AT4G36960 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 KO:K14411
            HSSP:Q14103 UniGene:At.4642 UniGene:At.4643 EMBL:AY048286
            EMBL:BT000573 IPI:IPI00527793 RefSeq:NP_001154290.1
            RefSeq:NP_568011.1 ProteinModelPortal:Q94AC3 SMR:Q94AC3
            IntAct:Q94AC3 PaxDb:Q94AC3 PRIDE:Q94AC3 EnsemblPlants:AT4G36960.1
            EnsemblPlants:AT4G36960.2 GeneID:829850 KEGG:ath:AT4G36960
            TAIR:At4g36960 HOGENOM:HOG000070627 InParanoid:Q94AC3 OMA:EITDLYM
            PhylomeDB:Q94AC3 ProtClustDB:CLSN2689792 Genevestigator:Q94AC3
            Uniprot:Q94AC3
        Length = 379

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 58/168 (34%), Positives = 93/168 (55%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KL V G+ W   S+ L++Y   FG + D ++MKD  T RSRGFG++TFA  E  +  LK 
Sbjct:     4 KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALKG 63

Query:   223 PIHTLDGKKIDPKHATPKNRPKI-GNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 281
               H L  + ++ K ATPK   +    +  +IFV  +    S  + +++F ++G++ +  M
Sbjct:    64 E-HFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDLYM 122

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
               D  +K+HRG GF+TF + + V+ + E   H +    V   +A PKE
Sbjct:   123 PKDYNSKQHRGIGFITFSSADSVEDLME-DTHDLGGTTVAVDRATPKE 169

 Score = 161 (61.7 bits), Expect = 4.0e-09, P = 4.0e-09
 Identities = 37/90 (41%), Positives = 50/90 (55%)

Query:   150 GRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFIT 209
             GR  PT       K+FVG L  + S + LR+YFG FG + D  I KDP     RGFGF+T
Sbjct:   229 GRGEPTTRG-IGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVT 287

Query:   210 FAEPETVEKVLKVPIHTLDGKKIDPKHATP 239
             FAE    ++V +   H + G+++    ATP
Sbjct:   288 FAENGVADRVARRS-HEICGQEVAIDSATP 316

 Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 31/83 (37%), Positives = 46/83 (55%)

Query:   245 IGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVV 304
             IGN   KIFVG + Q+ S ++++ YF +FG +++  +  D +   HRGFGFVTF    V 
Sbjct:   238 IGN---KIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVA 294

Query:   305 DHICEIHFHMIKNKKVECKKAQP 327
             D +     H I  ++V    A P
Sbjct:   295 DRVAR-RSHEICGQEVAIDSATP 316

 Score = 143 (55.4 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 29/83 (34%), Positives = 51/83 (61%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+ V G+  D  ++ +K Y S+FG +E+ +++ D+ T R RGFG+VTF + E   +  +
Sbjct:     3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALK 62

Query:   310 IHFHMIKNKKVECKKAQPKEAVQ 332
                H + N+ +E K A PKE ++
Sbjct:    63 GE-HFLGNRILEVKVATPKEEMR 84


>UNIPROTKB|F1LW17 [details] [associations]
            symbol:F1LW17 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 IPI:IPI00567724
            Ensembl:ENSRNOT00000046658 ArrayExpress:F1LW17 Uniprot:F1LW17
        Length = 249

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 63/193 (32%), Positives = 106/193 (54%)

Query:   149 SGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFI 208
             +G+ +P G +    KLF+GGLS++T+ + LRE+F  +G +TD         +RSRGFGF+
Sbjct:    20 TGKHSP-GTEKELRKLFIGGLSFETTDDSLREHFEKWGTLTDCG------NKRSRGFGFL 72

Query:   209 TFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNR--TKKIFVGGVSQDTSAEEV 266
             T++  E V+  +    H    + +  +  + ++  K G     KK++VGG+ +DT    +
Sbjct:    73 TYSCVEEVDAAVCARPHKAAVRVVGKRAVSREDSVKPGAHLMVKKLYVGGIKEDTEEYNL 132

Query:   267 KAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQ 326
             + YF ++GK+E   ++  +Q+ + RGF FVTF++ + VD I + H H I     E  K  
Sbjct:   133 RGYFKKYGKIETIEVMEGRQSGKKRGFAFVTFDDHDTVDKILQKH-HAINGNNCEVGKVL 191

Query:   327 PKEAVQANLLVGK 339
              KE   A    G+
Sbjct:   192 SKEMQSAGSQRGR 204

 Score = 135 (52.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
 Identities = 35/120 (29%), Positives = 57/120 (47%)

Query:   139 VLVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPI 198
             V V GK +     S   G      KL+VGG+   T    LR YF  +G +  + +M+   
Sbjct:    93 VRVVGKRAVSREDSVKPGAHLMVKKLYVGGIKEDTEEYNLRGYFKKYGKIETIEVMEGRQ 152

Query:   199 TQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVS 258
             + + RGF F+TF + +TV+K+L+   H ++G   +      K     G++  +   GG S
Sbjct:   153 SGKKRGFAFVTFDDHDTVDKILQKH-HAINGNNCEVGKVLSKEMQSAGSQRGR---GGAS 208

 Score = 44 (20.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query:   109 SGRSTPTGDDPTSAKLFVGGLN 130
             +G+ +P G +    KLF+GGL+
Sbjct:    20 TGKHSP-GTEKELRKLFIGGLS 40


>UNIPROTKB|F1M165 [details] [associations]
            symbol:F1M165 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 IPI:IPI00362409 Ensembl:ENSRNOT00000029622
            Uniprot:F1M165
        Length = 288

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 57/168 (33%), Positives = 96/168 (57%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +  +   ++M+DP T+RSRG GF T+   E ++  +  
Sbjct:    16 KLFIGGLSFRTTEESLRSHFEQWATLITCVVMRDPNTERSRGSGFDTYTTVEEMDAAMNA 75

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIF-VGGVSQDTSAEEVKAYFSQFGKVEETVM 281
               H +DG+ +  + +    RP   + T KIF V G+ +DT    ++ YF Q+ K+E   +
Sbjct:    76 RPHKVDGRVVSREDS---QRPG-AHLTVKIFIVSGIKEDTEEHHLRDYFEQYRKIEVIEI 131

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             + D+ +++ R F FVTF+  + VD I    +H +     E +KA  K+
Sbjct:   132 MTDRGSRKKRDFAFVTFDEHDSVDKIFIQKYHTVNGHNCEVRKALSKQ 179

 Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
 Identities = 23/77 (29%), Positives = 43/77 (55%)

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
             +K+F+GG+S  T+ E ++++F Q+  +   V++ D  T+R RG GF T+   E +D    
Sbjct:    15 RKLFIGGLSFRTTEESLRSHFEQWATLITCVVMRDPNTERSRGSGFDTYTTVEEMDAAMN 74

Query:   310 IHFHMIKNKKVECKKAQ 326
                H +  + V  + +Q
Sbjct:    75 ARPHKVDGRVVSREDSQ 91


>UNIPROTKB|F1P645 [details] [associations]
            symbol:LOC607505 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
            EMBL:AAEX03007023 Ensembl:ENSCAFT00000000618 OMA:EMARASP
            Uniprot:F1P645
        Length = 317

 Score = 248 (92.4 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
 Identities = 59/178 (33%), Positives = 92/178 (51%)

Query:   157 DDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETV 216
             ++P   KLF+GGLS++T+ E LR +F  +G + D ++ ++P  +RSRGFG +    P  +
Sbjct:     8 EEPQLRKLFIGGLSFETTDESLRSHFERWGPLPDRVVRREPNAERSRGFGVV----PRHL 63

Query:   217 EKVLKV----PIH-TLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFS 271
             E+V       P   T +  K          RP      KKIFVGG+  D     ++  F 
Sbjct:    64 EEVAAARNPGPTRWTEESWKQRAASREDSQRPGAHLTVKKIFVGGIKGDAEEHHLRDDFE 123

Query:   272 QFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             Q GK E   ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA  K+
Sbjct:   124 QDGKTEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHGCEVRKALSKQ 181

 Score = 42 (19.8 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query:   117 DDPTSAKLFVGGLN 130
             ++P   KLF+GGL+
Sbjct:     8 EEPQLRKLFIGGLS 21


>WB|WBGene00022235 [details] [associations]
            symbol:sqd-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000003
            "reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0000003 GO:GO:0003676 EMBL:FO081731
            eggNOG:COG0724 GeneTree:ENSGT00700000104255 KO:K03102
            RefSeq:NP_001023574.1 ProteinModelPortal:Q4W5P0 SMR:Q4W5P0
            STRING:Q4W5P0 PaxDb:Q4W5P0 PRIDE:Q4W5P0 EnsemblMetazoa:Y73B6BL.6b.1
            EnsemblMetazoa:Y73B6BL.6b.2 EnsemblMetazoa:Y73B6BL.6b.3
            EnsemblMetazoa:Y73B6BL.6b.4 EnsemblMetazoa:Y73B6BL.6b.5
            EnsemblMetazoa:Y73B6BL.6b.6 EnsemblMetazoa:Y73B6BL.6b.7
            EnsemblMetazoa:Y73B6BL.6b.8 GeneID:177392 KEGG:cel:CELE_Y73B6BL.6
            UCSC:Y73B6BL.6a.7 CTD:177392 WormBase:Y73B6BL.6b
            HOGENOM:HOG000017794 InParanoid:Q4W5P0 OMA:GHQTGYK NextBio:896614
            ArrayExpress:Q4W5P0 Uniprot:Q4W5P0
        Length = 308

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 65/191 (34%), Positives = 100/191 (52%)

Query:   141 VNGKSSG---DSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDP 197
             +NG +S    ++G ST   +D    K+FVGG+S + ++E L  +F  +G V    +  D 
Sbjct:     8 INGNASETIKENGHSTKGNEDK---KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDR 64

Query:   198 ITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGV 257
                RSRGF F+ F   E  +  L     T+ GK ++ K A  K+R       KK+FVGG+
Sbjct:    65 TNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA--KSR-----ENKKVFVGGL 117

Query:   258 SQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKN 317
               D S ++++++F QFGKV++     D+QTK  R F F+ FE EE  D            
Sbjct:   118 PSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGT 177

Query:   318 KKVECKKAQPK 328
             ++ + KKA P+
Sbjct:   178 RECDVKKAVPQ 188

 Score = 151 (58.2 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 32/84 (38%), Positives = 47/84 (55%)

Query:   246 GNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVD 305
             GN  KKIFVGG+S + + E++ ++F+Q+G+V +  +  D+   R RGF FV F   E   
Sbjct:    25 GNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCK 84

Query:   306 HICEIHFHMIKNKKVECKKAQPKE 329
                      IK K VE K A+ +E
Sbjct:    85 LALAAREQTIKGKSVEVKPAKSRE 108

 Score = 125 (49.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
 Identities = 29/80 (36%), Positives = 40/80 (50%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGL    S + LR +F  FG V D+    D  T+  R F FI F E E+ +K    
Sbjct:   111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170

Query:   223 PIHTLDGKKIDPKHATPKNR 242
                T   ++ D K A P+ +
Sbjct:   171 TKQTFGTRECDVKKAVPQGK 190

 Score = 46 (21.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query:   101 VNGKSSG---DSGRSTPTGDDPTSAKLFVGGLN 130
             +NG +S    ++G ST   +D    K+FVGG++
Sbjct:     8 INGNASETIKENGHSTKGNEDK---KIFVGGIS 37


>ZFIN|ZDB-GENE-030131-3777 [details] [associations]
            symbol:tardbp "TAR DNA binding protein"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0007626 "locomotory behavior" evidence=IMP] [GO:0048675 "axon
            extension" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-030131-3777 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007626 GO:GO:0003676 GO:GO:0048675 HSSP:Q14103 CTD:23435
            eggNOG:NOG145464 HOGENOM:HOG000254792 HOVERGEN:HBG058671
            OrthoDB:EOG447FTT GeneTree:ENSGT00570000079202 EMBL:BX663614
            EMBL:BC049348 IPI:IPI00495103 RefSeq:NP_958884.1 UniGene:Dr.2409
            SMR:Q802C7 STRING:Q802C7 Ensembl:ENSDART00000058555 GeneID:325052
            KEGG:dre:325052 InParanoid:Q802C7 NextBio:20809098 Uniprot:Q802C7
        Length = 412

 Score = 274 (101.5 bits), Expect = 8.2e-24, P = 8.2e-24
 Identities = 72/203 (35%), Positives = 107/203 (52%)

Query:   131 VVREAHQLVLVNGKSSGDS-GRSTPT----GDDPTSAKLFVGGLSWQTSSEKLREYFGMF 185
             VV    + VL + K   D    S+ T    GD  TS  L V GL W+TS + L++YFG F
Sbjct:    75 VVNYPKETVLPDNKRKMDEIDASSATKIKRGDQKTS-DLIVLGLPWKTSEQDLKDYFGTF 133

Query:   186 GAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKI 245
             G V  V + +D  T  S+GFGF+ F + ET  KV+    H +DG+  D K    K     
Sbjct:   134 GEVIMVQVKRDVKTGNSKGFGFVRFGDWETQSKVM-TQRHMIDGRWCDCKLPNSKQGIDE 192

Query:   246 GNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVD 305
               R++K+FVG  ++D +A+E++ +F Q+G+V +  +      K  R F FVTF +++V  
Sbjct:   193 PMRSRKVFVGRCTEDMTADELRQFFMQYGEVTDVFI-----PKPFRAFAFVTFADDQVAA 247

Query:   306 HICEIHFHMIKNKKVECKKAQPK 328
              +C     +IK   V    A+PK
Sbjct:   248 ALCGEDL-IIKGVSVHISNAEPK 269

 Score = 134 (52.2 bits), Expect = 5.3e-06, P = 5.3e-06
 Identities = 45/163 (27%), Positives = 76/163 (46%)

Query:   192 LIMKDPITQRSRGFGFIT--FAEPET----VEKVLKVPIHTL--DGK-KIDPKHATPKNR 242
             L  + P++Q  RG   +      PE     +  V+  P  T+  D K K+D   A+   +
Sbjct:    42 LRFRSPVSQCMRGVRLVDGILHAPENGWGNLVYVVNYPKETVLPDNKRKMDEIDASSATK 101

Query:   243 PKIGN-RTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENE 301
              K G+ +T  + V G+   TS +++K YF  FG+V    +  D +T   +GFGFV F + 
Sbjct:   102 IKRGDQKTSDLIVLGLPWKTSEQDLKDYFGTFGEVIMVQVKRDVKTGNSKGFGFVRFGDW 161

Query:   302 EVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
             E    +     HMI  +  +CK    K+ +   +   ++V +G
Sbjct:   162 ETQSKVMTQR-HMIDGRWCDCKLPNSKQGIDEPMR-SRKVFVG 202


>UNIPROTKB|F1MTY3 [details] [associations]
            symbol:F1MTY3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:DAAA02006340
            IPI:IPI00699446 Ensembl:ENSBTAT00000013110 Uniprot:F1MTY3
        Length = 301

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 58/170 (34%), Positives = 91/170 (53%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +       +   +M DP T+ SRGF F+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHCSH----SPSCVMTDPNTKCSRGFRFVTYATVEEVDAAMNA 70

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +D + ++PK    +    RP      KKIF GG+ +DT    ++ YF   GK+E  
Sbjct:    71 RPHKVDRRVVEPKRGVSREGSQRPGAHLTVKKIFAGGIKEDTEERHLRDYFENNGKIEVI 130

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ D  + + RGF FVTF++ + VD      +H +     E +KA  K+
Sbjct:   131 EIMTDPSSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNREVRKALSKQ 180

 Score = 141 (54.7 bits), Expect = 4.3e-07, P = 4.3e-07
 Identities = 31/91 (34%), Positives = 48/91 (52%)

Query:   150 GRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFIT 209
             G   P G   T  K+F GG+   T    LR+YF   G +  + IM DP + + RGF F+T
Sbjct:    90 GSQRP-GAHLTVKKIFAGGIKEDTEERHLRDYFENNGKIEVIEIMTDPSSGKKRGFAFVT 148

Query:   210 FAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F + ++V+K +    HT++G   + + A  K
Sbjct:   149 FDDHDSVDKTVIQKYHTVNGHNREVRKALSK 179

 Score = 123 (48.4 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 33/105 (31%), Positives = 55/105 (52%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++ S       + ++ D  TK  RGF FVT+   E
Sbjct:     7 PKEPGQLRKLFIGGLSFETTDESLRSHCSH----SPSCVMTDPNTKCSRGFRFVTYATVE 62

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+   +E  Q   A+L V K++  G
Sbjct:    63 EVDAAMNARPHKVDRRVVEPKRGVSREGSQRPGAHLTV-KKIFAG 106


>UNIPROTKB|F1PQB0 [details] [associations]
            symbol:HNRNPA1L2 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
            EMBL:AAEX03003034 Ensembl:ENSCAFT00000027199 Uniprot:F1PQB0
        Length = 314

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 60/173 (34%), Positives = 97/173 (56%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+ GLS++ + E LR +F  +G +TD ++M+DP T+ SRGFG +   +     +  KV
Sbjct:    15 KLFIRGLSFEITDESLRTHFEQWGTLTDYVVMRDPNTKCSRGFGAMEEVDAAMNSRPCKV 74

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
                 L+ K+   +  +P  RP +    KKIFVGG+ +DT    ++ YF Q+GK+E    +
Sbjct:    75 GRRVLEPKRAVSQEDSP--RPGVLLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIESM 132

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIK-NKKVECKKAQPKEAVQAN 334
              D+ + + RGF FVTF++ + VD I    +H    + +V  K    +E   A+
Sbjct:   133 TDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHAANGHNRVVRKTLWKQEMASAS 185

 Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 24/70 (34%), Positives = 40/70 (57%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T  K+FVGG+   T    LR+YF  +G +  +  M D  + + RGF F+TF + ++V+K+
Sbjct:    98 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIESMTDRGSGKKRGFAFVTFDDHDSVDKI 157

Query:   220 LKVPIHTLDG 229
             +    H  +G
Sbjct:   158 VIQKYHAANG 167

 Score = 123 (48.4 bits), Expect = 5.4e-05, P = 5.4e-05
 Identities = 28/107 (26%), Positives = 59/107 (55%)

Query:   239 PKNR-PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVT 297
             PK+  PK   + +K+F+ G+S + + E ++ +F Q+G + + V++ D  TK  RGFG + 
Sbjct:     2 PKSESPKEPEQLQKLFIRGLSFEITDESLRTHFEQWGTLTDYVVMRDPNTKCSRGFGAME 61

Query:   298 FENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
               +  +    C++   +++ K+   ++  P+  V   LL  K++ +G
Sbjct:    62 EVDAAMNSRPCKVGRRVLEPKRAVSQEDSPRPGV---LLTVKKIFVG 105


>UNIPROTKB|K7EJ88 [details] [associations]
            symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
            Ensembl:ENST00000591830 Uniprot:K7EJ88
        Length = 321

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 58/134 (43%), Positives = 81/134 (60%)

Query:   212 EPETVEKVLKVPIHTLDGKKIDPKHATPKN------RPKIG---------NRTKKIFVGG 256
             +P  V  VL    HTLDG+ IDPK  TP+       RPK G         +++ KIFVGG
Sbjct:     3 DPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGG 62

Query:   257 VSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIK 316
             +  +    E++ YF +FG V E VM+ D + +R RGFGF+TFE+E+ VD    +HFH I 
Sbjct:    63 IPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIM 122

Query:   317 NKKVECKKAQPKEA 330
              KKVE K+A+P+++
Sbjct:   123 GKKVEVKRAEPRDS 136

 Score = 199 (75.1 bits), Expect = 7.2e-14, P = 7.2e-14
 Identities = 37/88 (42%), Positives = 57/88 (64%)

Query:   154 PTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEP 213
             P  D+  S K+FVGG+       +LREYF  FG VT+V+++ D   QR RGFGFITF + 
Sbjct:    48 PRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDE 107

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKN 241
             ++V++ + +  H + GKK++ K A P++
Sbjct:   108 QSVDQAVNMHFHDIMGKKVEVKRAEPRD 135


>UNIPROTKB|I3L7S7 [details] [associations]
            symbol:LOC100621383 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00570000079202 Ensembl:ENSSSCT00000025708
            Uniprot:I3L7S7
        Length = 275

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 62/168 (36%), Positives = 94/168 (55%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L+EYF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:    36 TSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVM 95

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +A+E++ +F Q+G+V +  
Sbjct:    96 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTADELQQFFCQYGEVVDVF 154

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF +++V   +C     +IK   V    A+PK
Sbjct:   155 I-----PKPFRAFAFVTFADDQVAQSLCGEDL-IIKGISVHISNAEPK 196

 Score = 121 (47.7 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 36/120 (30%), Positives = 58/120 (48%)

Query:   227 LDGK-KIDPKHATPKNRPKIG-NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMD 284
             LD K K+D   A+   + K    +T  + V G+   T+ +++K YFS FG+V    +  D
Sbjct:    12 LDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKD 71

Query:   285 QQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
              +T   +GFGFV F   E    +     HMI  +  +CK    K++    L   ++V +G
Sbjct:    72 IKTGHSKGFGFVRFTEYETQVKVMSQR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 129


>UNIPROTKB|F1NBY1 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0003730
            "mRNA 3'-UTR binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0043922
            "negative regulation by host of viral transcription" evidence=IEA]
            [GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0003690 GO:GO:0070935
            IPI:IPI00596633 OMA:QFFSQYG GeneTree:ENSGT00570000079202
            EMBL:AADN02040753 PRIDE:F1NBY1 Ensembl:ENSGALT00000004585
            Uniprot:F1NBY1
        Length = 414

 Score = 272 (100.8 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 64/180 (35%), Positives = 98/180 (54%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L+EYF  FG V  V + KD  T  S+GFGF+ F + ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +A+E++ +F+Q+G+V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTADELQQFFAQYGEVVDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             +      K  R F FVTF +++V   +C     +IK   V    A+PK      L  G R
Sbjct:   222 I-----PKPFRAFAFVTFADDQVAQSLCGEDL-IIKGISVHISNAEPKHNSNRQLERGGR 275

 Score = 125 (49.1 bits), Expect = 5.5e-05, P = 5.5e-05
 Identities = 42/155 (27%), Positives = 73/155 (47%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      PE     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPEAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F + E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++    L   ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 196


>UNIPROTKB|E2QS43 [details] [associations]
            symbol:TARDBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA] [GO:0043922 "negative regulation by host of viral
            transcription" evidence=IEA] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA
            3'-UTR binding" evidence=IEA] [GO:0003690 "double-stranded DNA
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0008380
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0003690
            GO:GO:0043922 GO:GO:0070935 CTD:23435 OMA:QFFSQYG
            GeneTree:ENSGT00570000079202 EMBL:AAEX03001938 RefSeq:XP_535409.3
            Ensembl:ENSCAFT00000026536 GeneID:478234 KEGG:cfa:478234
            NextBio:20853591 Uniprot:E2QS43
        Length = 414

 Score = 272 (100.8 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 62/168 (36%), Positives = 94/168 (55%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L+EYF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +A+E++ +F Q+G+V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF +++V   +C     +IK   V    A+PK
Sbjct:   222 I-----PKPFRAFAFVTFADDQVAQSLCGEDL-IIKGISVHISNAEPK 263

 Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 41/155 (26%), Positives = 72/155 (46%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++    L   ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 196


>UNIPROTKB|Q5ZLN5 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0006355 GO:GO:0008380 GO:GO:0000166 GO:GO:0003677
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            EMBL:AJ719699 IPI:IPI00596633 RefSeq:NP_001026049.1
            UniGene:Gga.16753 HSSP:Q13148 ProteinModelPortal:Q5ZLN5 SMR:Q5ZLN5
            STRING:Q5ZLN5 PRIDE:Q5ZLN5 GeneID:419453 KEGG:gga:419453 CTD:23435
            eggNOG:NOG145464 HOGENOM:HOG000254792 HOVERGEN:HBG058671
            InParanoid:Q5ZLN5 OrthoDB:EOG447FTT NextBio:20822507 Uniprot:Q5ZLN5
        Length = 414

 Score = 272 (100.8 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 64/180 (35%), Positives = 98/180 (54%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L+EYF  FG V  V + KD  T  S+GFGF+ F + ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +A+E++ +F+Q+G+V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTADELQQFFAQYGEVVDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
             +      K  R F FVTF +++V   +C     +IK   V    A+PK      L  G R
Sbjct:   222 I-----PKPFRAFAFVTFADDQVAQSLCGEDL-IIKGISVHISNAEPKHNSNRQLERGGR 275

 Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
 Identities = 33/116 (28%), Positives = 57/116 (49%)

Query:   230 KKIDPKHATPKNRPKIG-NRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTK 288
             +K+D   A+   + K    +T  + V G+   T+ +++K YFS FG+V    +  D +T 
Sbjct:    83 RKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTG 142

Query:   289 RHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
               +GFGFV F + E    +     HMI  +  +CK    K++    L   ++V +G
Sbjct:   143 HSKGFGFVRFTDYETQVKVMSQR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 196


>RGD|1310906 [details] [associations]
            symbol:Tardbp "TAR DNA binding protein" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing"
            evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IDA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=IEP] [GO:0035061 "interchromatin granule" evidence=IDA]
            [GO:0043922 "negative regulation by host of viral transcription"
            evidence=IEA;ISO] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1310906 GO:GO:0005737 GO:GO:0000166 GO:GO:0016607
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0034976 EMBL:CH473968
            GO:GO:0005726 GO:GO:0035061 CTD:23435 GeneTree:ENSGT00570000079202
            EMBL:BC083752 RefSeq:NP_001011979.1 UniGene:Rn.2633
            Ensembl:ENSRNOT00000049822 GeneID:298648 KEGG:rno:298648
            Uniprot:I6L9G6
        Length = 285

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 62/168 (36%), Positives = 94/168 (55%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L++YF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +AEE++ +F Q+G+V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF +++V   +C     +IK   V    A+PK
Sbjct:   222 I-----PKPFRAFAFVTFADDKVAQSLCGEDL-IIKGISVHISNAEPK 263

 Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
 Identities = 41/155 (26%), Positives = 72/155 (46%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDEADASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++    L   ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 196


>UNIPROTKB|I3LNA4 [details] [associations]
            symbol:LOC100621383 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00570000079202 OMA:PSISRIF EMBL:CU694468
            Ensembl:ENSSSCT00000022360 Uniprot:I3LNA4
        Length = 413

 Score = 271 (100.5 bits), Expect = 1.9e-23, P = 1.9e-23
 Identities = 62/168 (36%), Positives = 94/168 (55%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L+EYF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   102 TSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVM 161

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +A+E++ +F Q+G+V +  
Sbjct:   162 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTADELQQFFCQYGEVVDVF 220

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF +++V   +C     +IK   V    A+PK
Sbjct:   221 I-----PKPFRAFAFVTFADDQVAQSLCGEDL-IIKGISVHISNAEPK 262

 Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 41/155 (26%), Positives = 72/155 (46%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    43 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKT 102

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   103 SDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMS 162

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++    L   ++V +G
Sbjct:   163 QR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 195


>UNIPROTKB|Q2KJ45 [details] [associations]
            symbol:TARDBP "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG145464
            HOGENOM:HOG000254792 HOVERGEN:HBG058671 OrthoDB:EOG447FTT
            GeneTree:ENSGT00570000079202 EMBL:DAAA02042967 EMBL:DAAA02042968
            UniGene:Bt.106561 EMBL:BC105527 IPI:IPI00695185 SMR:Q2KJ45
            STRING:Q2KJ45 Ensembl:ENSBTAT00000033464 InParanoid:Q2KJ45
            Uniprot:Q2KJ45
        Length = 298

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 61/168 (36%), Positives = 94/168 (55%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L++YF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +A+E++ +F Q+G+V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF +++V   +C     +IK   V    A+PK
Sbjct:   222 I-----PKPFRAFAFVTFADDQVAQSLCGEDL-IIKGISVHISNAEPK 263

 Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
 Identities = 41/155 (26%), Positives = 72/155 (46%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++    L   ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 196


>MGI|MGI:2387629 [details] [associations]
            symbol:Tardbp "TAR DNA binding protein" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO] [GO:0003730
            "mRNA 3'-UTR binding" evidence=ISO] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=ISO] [GO:0043922 "negative regulation by host of
            viral transcription" evidence=ISO] [GO:0070935 "3'-UTR-mediated
            mRNA stabilization" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:2387629 GO:GO:0005634 GO:GO:0006355 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351
            GO:GO:0003730 GO:GO:0003690 GO:GO:0043922 GO:GO:0070935
            UniGene:Mm.378962 CTD:23435 eggNOG:NOG145464 HOGENOM:HOG000254792
            HOVERGEN:HBG058671 OrthoDB:EOG447FTT OMA:QFFSQYG EMBL:AK133207
            EMBL:AK153803 EMBL:BC012873 EMBL:BC025544 EMBL:BC027772
            EMBL:BC031126 EMBL:BC033475 IPI:IPI00121758 RefSeq:NP_663531.1
            UniGene:Mm.22453 PDB:3D2W PDBsum:3D2W ProteinModelPortal:Q921F2
            SMR:Q921F2 STRING:Q921F2 PhosphoSite:Q921F2
            REPRODUCTION-2DPAGE:Q921F2 PaxDb:Q921F2 PRIDE:Q921F2
            Ensembl:ENSMUST00000084125 GeneID:230908 KEGG:mmu:230908
            GeneTree:ENSGT00570000079202 InParanoid:Q3V0E7
            EvolutionaryTrace:Q921F2 NextBio:380280 Bgee:Q921F2
            CleanEx:MM_TARDBP Genevestigator:Q921F2
            GermOnline:ENSMUSG00000041459 Uniprot:Q921F2
        Length = 414

 Score = 270 (100.1 bits), Expect = 2.6e-23, P = 2.6e-23
 Identities = 62/168 (36%), Positives = 94/168 (55%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L++YF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +AEE++ +F Q+G+V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF +++V   +C     +IK   V    A+PK
Sbjct:   222 I-----PKPFRAFAFVTFADDKVAQSLCGEDL-IIKGISVHISNAEPK 263

 Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 41/155 (26%), Positives = 72/155 (46%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++    L   ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 196


>UNIPROTKB|F1LUE7 [details] [associations]
            symbol:F1LUE7 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00566822
            Ensembl:ENSRNOT00000052211 ArrayExpress:F1LUE7 Uniprot:F1LUE7
        Length = 256

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 60/179 (33%), Positives = 99/179 (55%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ + LRE+F  +G +TD         +RSRGFGF+T++  E V+  +  
Sbjct:     3 KLFIGGLSFETTDDSLREHFEKWGTLTDCG------NKRSRGFGFLTYSCVEEVDAAVCA 56

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNR--TKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
               H    + +  +  + ++  K G     KK++VGG+ +DT    ++ YF ++GK+E   
Sbjct:    57 RPHKAAVRVVGKRAVSREDSVKPGAHLMVKKLYVGGIKEDTEEYNLRGYFKKYGKIETIE 116

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGK 339
             ++  +Q+ + RGF FVTF++ + VD I + H H I     E  K   KE   A    G+
Sbjct:   117 VMEGRQSGKKRGFAFVTFDDHDTVDKILQKH-HAINGNNCEVGKVLSKEMQSAGSQRGR 174

 Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 35/120 (29%), Positives = 57/120 (47%)

Query:   139 VLVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPI 198
             V V GK +     S   G      KL+VGG+   T    LR YF  +G +  + +M+   
Sbjct:    63 VRVVGKRAVSREDSVKPGAHLMVKKLYVGGIKEDTEEYNLRGYFKKYGKIETIEVMEGRQ 122

Query:   199 TQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVS 258
             + + RGF F+TF + +TV+K+L+   H ++G   +      K     G++  +   GG S
Sbjct:   123 SGKKRGFAFVTFDDHDTVDKILQKH-HAINGNNCEVGKVLSKEMQSAGSQRGR---GGAS 178


>UNIPROTKB|G3MX91 [details] [associations]
            symbol:TARDBP "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA] [GO:0043922 "negative regulation by host of viral
            transcription" evidence=IEA] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA
            3'-UTR binding" evidence=IEA] [GO:0003690 "double-stranded DNA
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0008380
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0003690
            GO:GO:0043922 GO:GO:0070935 CTD:23435 OMA:QFFSQYG
            GeneTree:ENSGT00570000079202 EMBL:DAAA02042967 EMBL:DAAA02042968
            RefSeq:NP_001039950.2 UniGene:Bt.106561 Ensembl:ENSBTAT00000065252
            GeneID:540632 KEGG:bta:540632 NextBio:20878740 Uniprot:G3MX91
        Length = 414

 Score = 269 (99.8 bits), Expect = 3.4e-23, P = 3.4e-23
 Identities = 61/168 (36%), Positives = 94/168 (55%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L++YF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +A+E++ +F Q+G+V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF +++V   +C     +IK   V    A+PK
Sbjct:   222 I-----PKPFRAFAFVTFADDQVAQSLCGEDL-IIKGISVHISNAEPK 263

 Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
 Identities = 41/155 (26%), Positives = 72/155 (46%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++    L   ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 196


>UNIPROTKB|F1PP12 [details] [associations]
            symbol:F1PP12 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 EMBL:AAEX03007418
            ProteinModelPortal:F1PP12 Ensembl:ENSCAFT00000029311 Uniprot:F1PP12
        Length = 229

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 58/172 (33%), Positives = 97/172 (56%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             +LF+ GL+++T++E LR +F  +G + D ++M DP T+ SR FGF+ +A  E V+  + V
Sbjct:    15 RLFIRGLNFETTNESLRGHFKQWGILMDCVVMIDPNTRHSRRFGFVMYATVEKVDAAVNV 74

Query:   223 PIHTLD--GKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVE 277
               H ++  GK   PK A  +    RP      KK FVGG+ +DT    ++ YF Q+G++ 
Sbjct:    75 RPHKVNRIGK---PKMAVSREDSQRPGAHLTGKKTFVGGIKEDTEEHHLRHYFEQYGEIR 131

Query:   278 ETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
                ++ DQ + + RGF FVT ++ + +D I     H +     E ++A  K+
Sbjct:   132 MIEIMTDQGSDKKRGFAFVTCDDHDSIDKIVIQKQHTVNGHNYEVRRALSKQ 183

 Score = 136 (52.9 bits), Expect = 6.2e-07, P = 6.2e-07
 Identities = 32/96 (33%), Positives = 50/96 (52%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K FVGG+   T    LR YF  +G +  + IM D  + + RG
Sbjct:    90 SREDSQR--P-GAHLTGKKTFVGGIKEDTEEHHLRHYFEQYGEIRMIEIMTDQGSDKKRG 146

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+T  + ++++K++    HT++G   + + A  K
Sbjct:   147 FAFVTCDDHDSIDKIVIQKQHTVNGHNYEVRRALSK 182


>UNIPROTKB|F1SA31 [details] [associations]
            symbol:F1SA31 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 EMBL:CU856608
            Ensembl:ENSSSCT00000014866 Uniprot:F1SA31
        Length = 332

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 57/173 (32%), Positives = 102/173 (58%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS QT+ + L  Y+  +G + D ++++DP +Q+SR F  + F     V+     
Sbjct:    17 KLFIGGLSSQTTGKGLN-YYKQWGKL-DCVVIRDPTSQKSR-FILLHFHPWLRVDAARAA 73

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
                ++DGK + PKHA P+    +P      KK+F+GG+++DT    ++ YF ++ K++  
Sbjct:    74 TPRSIDGKMVAPKHAVPREDYGKPGPLVTVKKLFIGGLTEDTEEHHLRDYFEKYEKIDAI 133

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              ++ D+Q+ + RGFGFVTF++ + VD + + + H +     E +KA  +  +Q
Sbjct:   134 EIITDRQSSKIRGFGFVTFDDHDHVDKLLQKN-HTVNGHHAEVRKALSQSKIQ 185

 Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 28/83 (33%), Positives = 50/83 (60%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T  KLF+GGL+  T    LR+YF  +  +  + I+ D  + + RGFGF+TF + + V+K+
Sbjct:   102 TVKKLFIGGLTEDTEEHHLRDYFEKYEKIDAIEIITDRQSSKIRGFGFVTFDDHDHVDKL 161

Query:   220 LKVPIHTLDGKKIDPKHATPKNR 242
             L+   HT++G   + + A  +++
Sbjct:   162 LQKN-HTVNGHHAEVRKALSQSK 183


>UNIPROTKB|F1LXW0 [details] [associations]
            symbol:F1LXW0 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 IPI:IPI00212167 Ensembl:ENSRNOT00000008039
            Uniprot:F1LXW0
        Length = 293

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 64/170 (37%), Positives = 94/170 (55%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF G LS++T+ E LR +F  +   T   +M+DP T+RSRGFGF+T+A  E V+ V+  
Sbjct:    15 KLFTGALSFETTDESLRSHFEQW--TTHCGVMRDPNTKRSRGFGFVTYATVEEVDAVMNA 72

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +DG+ ++PK A  +    RP   +   KIFVGG+ +DT    ++ Y  Q GK +  
Sbjct:    73 RPHKVDGRVVEPKRAVSREDSQRPG-AHLAVKIFVGGIKEDTEEHHLRDYSEQNGKKQ-- 129

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
                  +Q K+ RGF  VTF+  + VD I    +H       E +KA  K+
Sbjct:   130 -----RQWKKKRGFALVTFDAHDSVDKIVIQKYHT-NGHSCEVRKALWKQ 173

 Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 31/90 (34%), Positives = 49/90 (54%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   +  K+F G +S +T+ E ++++F Q+       ++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLWKLFTGALSFETTDESLRSHFEQW--TTHCGVMRDPNTKRSRGFGFVTYATVE 64

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
              VD +     H +  + VE K+A  +E  Q
Sbjct:    65 EVDAVMNARPHKVDGRVVEPKRAVSREDSQ 94


>UNIPROTKB|F1LZL9 [details] [associations]
            symbol:F1LZL9 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC109707 IPI:IPI00780768
            Ensembl:ENSRNOT00000045359 Uniprot:F1LZL9
        Length = 247

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 53/168 (31%), Positives = 95/168 (56%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ +  R +F   G +TD ++ +DP T+RSRGFGF+T+A  E V+  +  
Sbjct:     1 KLFIGGLSFETTYKNRRSHFEQRGTLTDCVVRRDPNTKRSRGFGFVTYATVEEVDAAMNA 60

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVML 282
               H +D + ++P  A  +      +  +  FV G+ +DT    ++  + Q+G++E   ++
Sbjct:    61 RPHKVDARVVEPNRAVSRE-----DSQRPGFVCGIKEDTEEHHLQNNYEQYGQIEVIEIM 115

Query:   283 MDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEA 330
              D+   + R F FVTF + ++ D I    +H +     E +KA  K++
Sbjct:   116 TDRGLGKKRDFAFVTFHDHDL-DEIVLQKYHNVHGYNCEVRKALSKQS 162

 Score = 140 (54.3 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 30/82 (36%), Positives = 47/82 (57%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S +T+ +  +++F Q G + + V+  D  TKR RGFGFVT+   E VD     
Sbjct:     1 KLFIGGLSFETTYKNRRSHFEQRGTLTDCVVRRDPNTKRSRGFGFVTYATVEEVDAAMNA 60

Query:   311 HFHMIKNKKVECKKAQPKEAVQ 332
               H +  + VE  +A  +E  Q
Sbjct:    61 RPHKVDARVVEPNRAVSREDSQ 82


>UNIPROTKB|F1M7F0 [details] [associations]
            symbol:F1M7F0 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00563307
            ProteinModelPortal:F1M7F0 Ensembl:ENSRNOT00000041604 Uniprot:F1M7F0
        Length = 224

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 53/162 (32%), Positives = 89/162 (54%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KL +GGL ++T+ E LR +F  +G  TD ++M+DP T+RSR  GF+T+   E V+  +  
Sbjct:    24 KLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSGFVTYNTVEEVDAAMNA 83

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
                 +DG+ + PK A  +    RP      KKIF GG+ +DT    V+ YF  +GK++  
Sbjct:    84 RPQKMDGRLVKPKRAVSREDSQRPGTQLTVKKIFEGGIKEDTEEHNVRDYFEHYGKIDMI 143

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVE 321
              ++ D+ + + + F  V  ++ + VD I    +H +    V+
Sbjct:   144 EIMTDRSSGK-KEFALVPLDDHDSVDKIAIQKYHTVNGTTVK 184

 Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
 Identities = 30/104 (28%), Positives = 51/104 (49%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   +  K+ +GG+   T+ E ++ +F ++G   + V++ D  TKR R  GFVT+   E
Sbjct:    16 PKEPEQLHKLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSGFVTYNTVE 75

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ--ANLLVGKRVILG 344
              VD         +  + V+ K+A  +E  Q     L  K++  G
Sbjct:    76 EVDAAMNARPQKMDGRLVKPKRAVSREDSQRPGTQLTVKKIFEG 119


>UNIPROTKB|B1AKP7 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109811
            HOGENOM:HOG000254792 HOVERGEN:HBG058671 UniGene:Hs.300624
            HGNC:HGNC:11571 ChiTaRS:TARDBP IPI:IPI00639819 SMR:B1AKP7
            Ensembl:ENST00000315091 Uniprot:B1AKP7
        Length = 295

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 60/168 (35%), Positives = 92/168 (54%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L+EYF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K       R++K+FVG  ++D + +E++ +FSQ+G V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF ++++   +C     +IK   V    A+PK
Sbjct:   222 I-----PKPFRAFAFVTFADDQIAQSLCGEDL-IIKGISVHISNAEPK 263

 Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 42/155 (27%), Positives = 73/155 (47%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++ Q   L  ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQS-QDEPLRSRKVFVG 196


>UNIPROTKB|G3V162 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 EMBL:CH471130 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AL109811 UniGene:Hs.300624 HGNC:HGNC:11571 ChiTaRS:TARDBP
            ProteinModelPortal:G3V162 SMR:G3V162 PRIDE:G3V162
            Ensembl:ENST00000473869 ArrayExpress:G3V162 Bgee:G3V162
            Uniprot:G3V162
        Length = 298

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 60/168 (35%), Positives = 92/168 (54%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L+EYF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K       R++K+FVG  ++D + +E++ +FSQ+G V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF ++++   +C     +IK   V    A+PK
Sbjct:   222 I-----PKPFRAFAFVTFADDQIAQSLCGEDL-IIKGISVHISNAEPK 263

 Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 42/155 (27%), Positives = 73/155 (47%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++ Q   L  ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQS-QDEPLRSRKVFVG 196


>RGD|1564416 [details] [associations]
            symbol:RGD1564416 "similar to Heterogeneous nuclear
            ribonucleoprotein A1 (Helix-destabilizing protein
            (Topoisomerase-inhibitor suppressed)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1564416 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00388666 Ensembl:ENSRNOT00000037037 Uniprot:F1LZ88
        Length = 314

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 56/184 (30%), Positives = 98/184 (53%)

Query:   151 RSTPTGDDPTSAKLF-VGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFIT 209
             R +  G +    +++ + GLS++T+ E L+         ++ L+M+DP T+RSRGFGF+ 
Sbjct:     2 RESEGGREKGRERVYLIRGLSFETTDESLKTMEN----TSNFLVMRDPNTKRSRGFGFVP 57

Query:   210 FAEPETVEKVLKVPIHTLDGKKIDPKHAT----PKNRPKIGNRTKKIFVGGVSQDTSAEE 265
             +   E V+  +    H + G+ + PK  +       RP      KK+ VGG+++DT    
Sbjct:    58 YTTVEEVDATMNARPHKVGGRVVGPKRVSCGMEKSQRPGAPLTMKKVLVGGINEDTEEHH 117

Query:   266 VKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKA 325
             ++ YF  +GK E   ++ D+ + + RGF FVTF++ + VD I    +H +     E +KA
Sbjct:   118 LRDYFEWYGKTEVIEIMTDRGSVKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 177

Query:   326 QPKE 329
               K+
Sbjct:   178 LSKQ 181


>UNIPROTKB|Q13148 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008219 "cell
            death" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA] [GO:0043922
            "negative regulation by host of viral transcription" evidence=IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003723
            "RNA binding" evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
            GO:GO:0008219 EMBL:CH471130 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003700 GO:GO:0006366 GO:GO:0003730 GO:GO:0003690
            Orphanet:803 eggNOG:COG0724 GO:GO:0043922 Orphanet:275872
            GO:GO:0070935 EMBL:AL109811 CTD:23435 HOVERGEN:HBG058671
            OrthoDB:EOG447FTT EMBL:U23731 EMBL:EF434181 EMBL:EF434182
            EMBL:EF434183 EMBL:AK312416 EMBL:CR533534 EMBL:AK222754
            EMBL:AL050265 EMBL:BC071657 EMBL:BC095435 IPI:IPI00025815
            IPI:IPI00844544 IPI:IPI00971018 PIR:I38977 RefSeq:NP_031401.1
            UniGene:Hs.300624 PDB:1WF0 PDB:2CQG PDBsum:1WF0 PDBsum:2CQG
            ProteinModelPortal:Q13148 SMR:Q13148 DIP:DIP-31167N IntAct:Q13148
            STRING:Q13148 PhosphoSite:Q13148 DMDM:20140568 PaxDb:Q13148
            PRIDE:Q13148 DNASU:23435 Ensembl:ENST00000240185 GeneID:23435
            KEGG:hsa:23435 UCSC:uc001art.3 GeneCards:GC01P011006
            HGNC:HGNC:11571 HPA:CAB003703 HPA:HPA017284 MIM:605078 MIM:612069
            neXtProt:NX_Q13148 PharmGKB:PA36336 InParanoid:Q13148 OMA:QFFSQYG
            PhylomeDB:Q13148 ChiTaRS:TARDBP EvolutionaryTrace:Q13148
            GenomeRNAi:23435 NextBio:45695 ArrayExpress:Q13148 Bgee:Q13148
            CleanEx:HS_TARDBP Genevestigator:Q13148 GermOnline:ENSG00000120948
            Uniprot:Q13148
        Length = 414

 Score = 261 (96.9 bits), Expect = 2.9e-22, P = 2.9e-22
 Identities = 60/168 (35%), Positives = 92/168 (54%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L+EYF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K       R++K+FVG  ++D + +E++ +FSQ+G V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             +      K  R F FVTF ++++   +C     +IK   V    A+PK
Sbjct:   222 I-----PKPFRAFAFVTFADDQIAQSLCGEDL-IIKGISVHISNAEPK 263

 Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 42/155 (27%), Positives = 73/155 (47%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++ Q   L  ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQS-QDEPLRSRKVFVG 196


>UNIPROTKB|F1MH29 [details] [associations]
            symbol:F1MH29 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:DAAA02006340
            IPI:IPI00839326 Ensembl:ENSBTAT00000046159 Uniprot:F1MH29
        Length = 241

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 55/162 (33%), Positives = 87/162 (53%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +       +   +M DP T+ SRGF F+T+A  E V+  +  
Sbjct:    14 KLFIGGLSFETTDESLRSHCSH----SPSCVMTDPNTKCSRGFRFVTYATVEEVDAAMNA 69

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
               H +D + ++PK    +    RP      KKIF GG+ +DT    ++ YF + GK+E  
Sbjct:    70 RPHKVDRRVVEPKRGVSREGSQRPGAHLTVKKIFAGGIKEDTEERHLRDYFEKPGKIEVI 129

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVE 321
              ++ D  + + RGF FVTF++ + VD      +H +     E
Sbjct:   130 EIMTDPSSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNRE 171

 Score = 137 (53.3 bits), Expect = 6.0e-07, P = 6.0e-07
 Identities = 29/80 (36%), Positives = 44/80 (55%)

Query:   150 GRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFIT 209
             G   P G   T  K+F GG+   T    LR+YF   G +  + IM DP + + RGF F+T
Sbjct:    89 GSQRP-GAHLTVKKIFAGGIKEDTEERHLRDYFEKPGKIEVIEIMTDPSSGKKRGFAFVT 147

Query:   210 FAEPETVEKVLKVPIHTLDG 229
             F + ++V+K +    HT++G
Sbjct:   148 FDDHDSVDKTVIQKYHTVNG 167

 Score = 123 (48.4 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 33/105 (31%), Positives = 55/105 (52%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++ S       + ++ D  TK  RGF FVT+   E
Sbjct:     6 PKEPGQLRKLFIGGLSFETTDESLRSHCSH----SPSCVMTDPNTKCSRGFRFVTYATVE 61

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILG 344
              VD       H +  + VE K+   +E  Q   A+L V K++  G
Sbjct:    62 EVDAAMNARPHKVDRRVVEPKRGVSREGSQRPGAHLTV-KKIFAG 105


>UNIPROTKB|D4A9S4 [details] [associations]
            symbol:Tardbp "Protein Tardbp" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1310906 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00197538 ProteinModelPortal:D4A9S4
            Ensembl:ENSRNOT00000017922 ArrayExpress:D4A9S4 Uniprot:D4A9S4
        Length = 288

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 56/148 (37%), Positives = 86/148 (58%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L++YF  FG V  V + KD  T  S+GFGF+ F E ET  KV+
Sbjct:   103 TSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162

Query:   221 KVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETV 280
                 H +DG+  D K    K  P    R++K+FVG  ++D +AEE++ +F Q+G+V +  
Sbjct:   163 SQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVF 221

Query:   281 MLMDQQTKRHRGFGFVTFENEEVVDHIC 308
             +      K  R F FVTF +++V   +C
Sbjct:   222 I-----PKPFRAFAFVTFADDKVAQSLC 244

 Score = 121 (47.7 bits), Expect = 7.5e-05, P = 7.5e-05
 Identities = 41/155 (26%), Positives = 72/155 (46%)

Query:   195 KDPITQRSRGFGFIT--FAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             ++P++Q  RG   +      P+     ++ V  +  D K K+D   A+   + K    +T
Sbjct:    44 RNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDEADASSAVKVKRAVQKT 103

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YFS FG+V    +  D +T   +GFGFV F   E    +  
Sbjct:   104 SDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163

Query:   310 IHFHMIKNKKVECKKAQPKEAVQANLLVGKRVILG 344
                HMI  +  +CK    K++    L   ++V +G
Sbjct:   164 QR-HMIDGRWCDCKLPNSKQSPDEPLR-SRKVFVG 196


>UNIPROTKB|J3QKT5 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 ProteinModelPortal:J3QKT5
            Ensembl:ENST00000581776 Uniprot:J3QKT5
        Length = 99

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 48/89 (53%), Positives = 64/89 (71%)

Query:   142 NGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQR 201
             NG S G SG +  +  DP   K+F+GGLSWQTS + LR+YF  FG + + ++M+DP T+R
Sbjct:     4 NG-SQGTSGSANDSQHDP--GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60

Query:   202 SRGFGFITFAEPETVEKVLKVPIHTLDGK 230
             SRGFGF+TFA+P +V+KVL  P H LD K
Sbjct:    61 SRGFGFVTFADPASVDKVLGQPHHELDSK 89

 Score = 157 (60.3 bits), Expect = 6.9e-11, P = 6.9e-11
 Identities = 30/74 (40%), Positives = 48/74 (64%)

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             K+F+GG+S  TS + ++ YFS+FG++ E +++ D  TKR RGFGFVTF +   VD +   
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81

Query:   311 HFHMIKNKKVECKK 324
               H + +K   C++
Sbjct:    82 PHHELDSKT--CRR 93


>UNIPROTKB|E2RF37 [details] [associations]
            symbol:E2RF37 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 EMBL:AAEX03000660
            Ensembl:ENSCAFT00000003502 OMA:MAMCSAN Uniprot:E2RF37
        Length = 330

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 52/148 (35%), Positives = 83/148 (56%)

Query:   185 FGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN--- 241
             +G +TD ++M+DP T+ SRGF F+T+A  E V+  + V  H +D + ++ K A  +    
Sbjct:     3 WGMLTDCVVMRDPNTKCSRGFEFLTYATVEDVDAAMNVRPHKVDERVVELKKAVSREDSQ 62

Query:   242 RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENE 301
             RP      KKIFVGG+ +DT    ++ YF  +GK+E   ++ D+ +   R F FVTF+  
Sbjct:    63 RPGAHLTVKKIFVGGIKEDTEQHHLRDYFEHYGKIEVIEIMTDRGSGNKRSFAFVTFDAH 122

Query:   302 EVVDHICEIHFHMIKNKKVECKKAQPKE 329
             + VD I    +H +     E +KA  K+
Sbjct:   123 DSVDKIVIQKYHTVNGHNCEVRKALLKQ 150

 Score = 131 (51.2 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 33/96 (34%), Positives = 50/96 (52%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  +   R 
Sbjct:    57 SREDSQR--P-GAHLTVKKIFVGGIKEDTEQHHLRDYFEHYGKIEVIEIMTDRGSGNKRS 113

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F+TF   ++V+K++    HT++G   + + A  K
Sbjct:   114 FAFVTFDAHDSVDKIVIQKYHTVNGHNCEVRKALLK 149


>ZFIN|ZDB-GENE-031030-1 [details] [associations]
            symbol:tardbpl "TAR DNA binding protein, like"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-031030-1 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HSSP:Q14103 HOGENOM:HOG000254792
            HOVERGEN:HBG058671 GeneTree:ENSGT00570000079202 OMA:PSISRIF
            EMBL:CR381616 EMBL:BC044405 IPI:IPI00504192 RefSeq:NP_938178.1
            UniGene:Dr.33664 SMR:Q803N5 STRING:Q803N5
            Ensembl:ENSDART00000027255 GeneID:386630 KEGG:dre:386630 CTD:386630
            InParanoid:Q803N5 NextBio:20813960 Uniprot:Q803N5
        Length = 303

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 59/173 (34%), Positives = 97/173 (56%)

Query:   161 SAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVL 220
             ++ L V GL W+T+ + L++YFG FG V  V + +D  +  S+GFGF+ F + ET  KV+
Sbjct:   104 TSDLIVLGLPWKTTEQDLKDYFGTFGEVIMVQVKRDAKSGNSKGFGFVRFTDYETQIKVM 163

Query:   221 KVPIHTLDGKKID---P--KHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGK 275
                 H +DG+  D   P  K+   +  P    R++K+FVG  ++D +A+E++ +F Q+G+
Sbjct:   164 SQR-HMIDGRWCDCKLPNSKYFLEQAGPDEPMRSRKVFVGRCTEDMTADELRQFFMQYGE 222

Query:   276 VEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPK 328
             V +  +      K  R F FVTF +++V   +C     +IK   V    A+PK
Sbjct:   223 VTDVFI-----PKPFRAFAFVTFADDQVAQSLCGEDL-IIKGTSVHISNAEPK 269

 Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
 Identities = 38/139 (27%), Positives = 63/139 (45%)

Query:   195 KDPITQRSRGFGFI--TFAEPETV-EKVLKVPIHTLDGK-KIDPKHATPKNRPKIG-NRT 249
             + P++Q  RG   +      PE     ++ V  +  D K K+D   A    + K G  +T
Sbjct:    45 RSPVSQCMRGVRLVEGVLHAPEADWGNLVYVVNYPKDNKRKMDEMDAASAVKIKRGIQKT 104

Query:   250 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICE 309
               + V G+   T+ +++K YF  FG+V    +  D ++   +GFGFV F + E    +  
Sbjct:   105 SDLIVLGLPWKTTEQDLKDYFGTFGEVIMVQVKRDAKSGNSKGFGFVRFTDYETQIKVMS 164

Query:   310 IHFHMIKNKKVECKKAQPK 328
                HMI  +  +CK    K
Sbjct:   165 QR-HMIDGRWCDCKLPNSK 182


>UNIPROTKB|F8VYN5 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0000380 EMBL:AC078778 HGNC:HGNC:5031
            ChiTaRS:HNRNPA1 IPI:IPI00644968 ProteinModelPortal:F8VYN5
            SMR:F8VYN5 PRIDE:F8VYN5 Ensembl:ENST00000550994 ArrayExpress:F8VYN5
            Bgee:F8VYN5 Uniprot:F8VYN5
        Length = 113

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 46/112 (41%), Positives = 71/112 (63%)

Query:   194 MKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTK 250
             M+DP T+RSRGFGF+T+A  E V+  +    H +DG+ ++PK A  +    RP      K
Sbjct:     1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVK 60

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             KIFVGG+ +DT    ++ YF Q+GK+E   ++ D+ + + RGF FVTF++ +
Sbjct:    61 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHD 112

 Score = 111 (44.1 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 27/71 (38%), Positives = 39/71 (54%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S  DS R  P G   T  K+FVGG+   T    LR+YF  +G +  + IM D  + + RG
Sbjct:    46 SREDSQR--P-GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRG 102

Query:   205 FGFITFAEPET 215
             F F+TF + ++
Sbjct:   103 FAFVTFDDHDS 113

 Score = 100 (40.3 bits), Expect = 0.00012, P = 0.00012
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query:   282 LMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVG 338
             + D  TKR RGFGFVT+   E VD       H +  + VE K+A  +E  Q   A+L V 
Sbjct:     1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV- 59

Query:   339 KRVILG 344
             K++ +G
Sbjct:    60 KKIFVG 65


>UNIPROTKB|F1M6M1 [details] [associations]
            symbol:F1M6M1 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 IPI:IPI00563231
            Ensembl:ENSRNOT00000040517 Uniprot:F1M6M1
        Length = 253

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 49/135 (36%), Positives = 78/135 (57%)

Query:   199 TQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVG 255
             T+RSRGFGF+T    E V+  +    H +DG+ ++PK A  +    RP      KKIFVG
Sbjct:     1 TKRSRGFGFVTCTSVEKVDATMNARPHKVDGRVVEPKRAMSREDSQRPDAHLTVKKIFVG 60

Query:   256 GVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMI 315
              + +DT    ++ YF Q+GK+E   ++ D+ +++ RGF FVTF++ + VD I    +H +
Sbjct:    61 SIKEDTEEHHLRDYFEQYGKIELIEIMADRGSEKKRGFAFVTFDDHDSVDKIVTQKYHTV 120

Query:   316 K-NKKVECKKAQPKE 329
               + K E +K   K+
Sbjct:   121 NGHHKCEVRKPLSKQ 135

 Score = 138 (53.6 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query:   160 TSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKV 219
             T  K+FVG +   T    LR+YF  +G +  + IM D  +++ RGF F+TF + ++V+K+
Sbjct:    53 TVKKIFVGSIKEDTEEHHLRDYFEQYGKIELIEIMADRGSEKKRGFAFVTFDDHDSVDKI 112

Query:   220 LKVPIHTLDG 229
             +    HT++G
Sbjct:   113 VTQKYHTVNG 122


>UNIPROTKB|E1BK61 [details] [associations]
            symbol:E1BK61 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 EMBL:DAAA02005585 IPI:IPI00689266
            Ensembl:ENSBTAT00000016960 Uniprot:E1BK61
        Length = 270

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 56/170 (32%), Positives = 93/170 (54%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+ GLS++T  E L  +F M G    +++M+ P T+ SRGFGF+T     ++  +   
Sbjct:    11 KLFIRGLSFETIDESLSSHFEM-GKAHRLVVMRVPNTKHSRGFGFVTKPWWRSLAAMNAR 69

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
             P H +D + ++PK    +    RP      KKIFVGG+ + T    ++  F Q+GK++  
Sbjct:    70 P-HKVDERVVEPKRDVSRGDSQRPHAHLTVKKIFVGGIQEGTEEHHLRNNFEQYGKIDIE 128

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +M  D+ + + RGF F TF++ + VD I    +H +     E ++A  K+
Sbjct:   129 IMT-DRGSDKKRGFAFETFDDHDSVDKIVIQKYHTVNGHNCEVREALSKQ 177

 Score = 133 (51.9 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 34/96 (35%), Positives = 51/96 (53%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S GDS R  P     T  K+FVGG+   T    LR  F  +G + D+ IM D  + + RG
Sbjct:    85 SRGDSQR--PHAH-LTVKKIFVGGIQEGTEEHHLRNNFEQYGKI-DIEIMTDRGSDKKRG 140

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F TF + ++V+K++    HT++G   + + A  K
Sbjct:   141 FAFETFDDHDSVDKIVIQKYHTVNGHNCEVREALSK 176


>UNIPROTKB|G3MYU0 [details] [associations]
            symbol:G3MYU0 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 EMBL:DAAA02005585
            Ensembl:ENSBTAT00000064368 Uniprot:G3MYU0
        Length = 256

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 56/170 (32%), Positives = 93/170 (54%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+ GLS++T  E L  +F M G    +++M+ P T+ SRGFGF+T     ++  +   
Sbjct:    27 KLFIRGLSFETIDESLSSHFEM-GKAHRLVVMRVPNTKHSRGFGFVTKPWWRSLAAMNAR 85

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
             P H +D + ++PK    +    RP      KKIFVGG+ + T    ++  F Q+GK++  
Sbjct:    86 P-HKVDERVVEPKRDVSRGDSQRPHAHLTVKKIFVGGIQEGTEEHHLRNNFEQYGKIDIE 144

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
             +M  D+ + + RGF F TF++ + VD I    +H +     E ++A  K+
Sbjct:   145 IMT-DRGSDKKRGFAFETFDDHDSVDKIVIQKYHTVNGHNCEVREALSKQ 193

 Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 34/96 (35%), Positives = 51/96 (53%)

Query:   145 SSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRG 204
             S GDS R  P     T  K+FVGG+   T    LR  F  +G + D+ IM D  + + RG
Sbjct:   101 SRGDSQR--PHAH-LTVKKIFVGGIQEGTEEHHLRNNFEQYGKI-DIEIMTDRGSDKKRG 156

Query:   205 FGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             F F TF + ++V+K++    HT++G   + + A  K
Sbjct:   157 FAFETFDDHDSVDKIVIQKYHTVNGHNCEVREALSK 192


>UNIPROTKB|F1S420 [details] [associations]
            symbol:F1S420 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
            EMBL:CU914278 Ensembl:ENSSSCT00000015327 OMA:NHEVAGS Uniprot:F1S420
        Length = 300

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 75/233 (32%), Positives = 109/233 (46%)

Query:   103 GKSSGDSGRSTPTGDDPTSAKLFVGGLNVVREAHQLVLVNGKSSGDSGRSTPTGDDPTSA 162
             G+S   +G  T TG   +++     G      A      NG + GD  + TP+ ++  + 
Sbjct:    26 GESPAGTGTGTGTGTGTSTSSGAAAGSGGGTAAPPAGNQNG-AEGD--QITPSKNEEDAG 82

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             K+FVGGLSW TS + L++YF  FG V D  I  DP T RSRGFGFI F +  +VEKV+++
Sbjct:    83 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVIEI 142

Query:   223 PIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGG--VSQD-TSAEEVKAYFSQFGKVEET 279
                   G +  PK    + + K   + KK+  G   V+Q  TS             + + 
Sbjct:   143 KQRREYGLECGPKEIAKRQKDK---KKKKLATGSSRVAQRLTSPTRNHEVAGSIPALAQW 199

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQ 332
             V   D  +++     F+ F  EE V         +I   + E K AQPKE  Q
Sbjct:   200 VK--DPASRKILKLPFIDFSVEEPVRASLVKLLVVISGSRCEIKVAQPKEVYQ 250


>UNIPROTKB|F1RVD1 [details] [associations]
            symbol:HNRPDL "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 CTD:9987
            GeneTree:ENSGT00700000104347 KO:K13044 EMBL:CU627987
            RefSeq:XP_003129409.3 UniGene:Ssc.55768 Ensembl:ENSSSCT00000010127
            GeneID:100511704 KEGG:ssc:100511704 Uniprot:F1RVD1
        Length = 216

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 52/111 (46%), Positives = 68/111 (61%)

Query:   219 VLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEE 278
             VL++  H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E 
Sbjct:     1 VLELKEHKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIEN 57

Query:   279 TVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
               + MD +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:    58 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 108

 Score = 171 (65.3 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 36/85 (42%), Positives = 52/85 (61%)

Query:   156 GDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPET 215
             G +P   K+FVGGLS  TS E+++EYFG FG + ++ +  D  T   RGF FIT+ + E 
Sbjct:    24 GKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 82

Query:   216 VEKVLKVPIHTLDGKKIDPKHATPK 240
             V+K+L+   H +   K + K A PK
Sbjct:    83 VKKLLESRYHQIGSGKCEIKVAQPK 107


>UNIPROTKB|F1N7Z3 [details] [associations]
            symbol:F1N7Z3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 IPI:IPI00696055 EMBL:DAAA02008074
            Ensembl:ENSBTAT00000056782 Uniprot:F1N7Z3
        Length = 268

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 60/170 (35%), Positives = 90/170 (52%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+ GLS++T+ E LR  F  +G +TD ++ +DP  +R  G G     E     K  +V
Sbjct:     8 KLFIRGLSFETTHEGLRSRFEQWGTLTDCVVRRDPNAKRHGGGG-----E----RKATQV 58

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
                  DG+ + PK A  +    RP      KK+FVGG+ +DT    ++ YF Q+GK E  
Sbjct:    59 -----DGRVVKPKRAVSREDSQRPGAHLPVKKVFVGGIKEDTEEHHLRDYFEQYGKTEVI 113

Query:   280 VMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              ++ DQ + + RGF FVTF++ + VD I    +H       E +KA  K+
Sbjct:   114 EIITDQGSGKKRGFVFVTFDDHDSVDKIVIQKYHTGNGLNCEVRKALSKQ 163


>RGD|1309982 [details] [associations]
            symbol:Hnrnpc "heterogeneous nuclear ribonucleoprotein C
            (C1/C2)" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0042802 "identical protein binding"
            evidence=ISO] [GO:0045120 "pronucleus" evidence=ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1309982 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 eggNOG:COG0724
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 EMBL:X16933 IPI:IPI00213609
            PIR:S09017 UniGene:Rn.101929 ProteinModelPortal:P17132 SMR:P17132
            STRING:P17132 PRIDE:P17132 UCSC:RGD:1309982 ArrayExpress:P17132
            Genevestigator:P17132 GermOnline:ENSRNOG00000002292 Uniprot:P17132
        Length = 158

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 55/127 (43%), Positives = 71/127 (55%)

Query:   214 ETVEKVLKVPIHTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQF 273
             E+V+KV+    H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  F
Sbjct:     1 ESVDKVMDQKEHKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGGF 57

Query:   274 GKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQA 333
             G+VE   + MD +T + RGF F+TF+ EE V  I E  +H +   K E K A  KE  Q 
Sbjct:    58 GEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQ 117

Query:   334 NLLVGKR 340
                 G R
Sbjct:   118 QQQWGSR 124

 Score = 169 (64.5 bits), Expect = 3.2e-12, P = 3.2e-12
 Identities = 40/102 (39%), Positives = 54/102 (52%)

Query:   141 VNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQ 200
             +NGK             +P   K+FVGGLS  T  EK+REYFG FG V  + +  D  T 
Sbjct:    14 LNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTN 72

Query:   201 RSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNR 242
             + RGF FITF E E V+K+++   H +   K + K A  K +
Sbjct:    73 KRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 114


>UNIPROTKB|G3N220 [details] [associations]
            symbol:G3N220 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0071013 GeneTree:ENSGT00700000104376 EMBL:DAAA02027300
            Ensembl:ENSBTAT00000063435 OMA:GWEDRSH Uniprot:G3N220
        Length = 310

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 51/143 (35%), Positives = 81/143 (56%)

Query:   194 MKDPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKN---RPKIGNRTK 250
             M+DP T+RSRGFGF+T++  E V+  +    H    + ++PK A  +    +P      K
Sbjct:     1 MRDPKTKRSRGFGFVTYSCVEEVDAAMYARPHK---RVVEPKRAVSREDSVKPGAHLTVK 57

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVDHICEI 310
             KIFVGG+ +DT    ++  F  +GK+E   ++ D+Q+ + RG  FVTF++ + VD I   
Sbjct:    58 KIFVGGIKEDTEEYNLRDCFENYGKIETIEVMEDRQSGKKRGCAFVTFDDHDTVDKIVVQ 117

Query:   311 HFHMIKNKKVECKKAQPKEAVQA 333
              +H I     E KKA  K+ +Q+
Sbjct:   118 KYHTINGHNCEVKKALSKQEMQS 140

 Score = 141 (54.7 bits), Expect = 4.7e-07, P = 4.7e-07
 Identities = 33/105 (31%), Positives = 54/105 (51%)

Query:   136 HQLVLVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMK 195
             H+ V V  K +     S   G   T  K+FVGG+   T    LR+ F  +G +  + +M+
Sbjct:    32 HKRV-VEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDCFENYGKIETIEVME 90

Query:   196 DPITQRSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPK 240
             D  + + RG  F+TF + +TV+K++    HT++G   + K A  K
Sbjct:    91 DRQSGKKRGCAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 135


>UNIPROTKB|I3LP80 [details] [associations]
            symbol:HNRPDL "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
            EMBL:CU627987 Ensembl:ENSSSCT00000027195 OMA:NVVEMEM Uniprot:I3LP80
        Length = 231

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 50/105 (47%), Positives = 64/105 (60%)

Query:   225 HTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMD 284
             H LDGK IDPK A      K     KK+FVGG+S DTS E++K YF  FG++E   + MD
Sbjct:     3 HKLDGKLIDPKRAKAL---KGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMD 59

Query:   285 QQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKE 329
              +T   RGF F+T+ +EE V  + E  +H I + K E K AQPKE
Sbjct:    60 TKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 104

 Score = 171 (65.3 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 36/85 (42%), Positives = 52/85 (61%)

Query:   156 GDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPET 215
             G +P   K+FVGGLS  TS E+++EYFG FG + ++ +  D  T   RGF FIT+ + E 
Sbjct:    20 GKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 78

Query:   216 VEKVLKVPIHTLDGKKIDPKHATPK 240
             V+K+L+   H +   K + K A PK
Sbjct:    79 VKKLLESRYHQIGSGKCEIKVAQPK 103


>UNIPROTKB|F1M0Q5 [details] [associations]
            symbol:F1M0Q5 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00559641
            ProteinModelPortal:F1M0Q5 Ensembl:ENSRNOT00000036216 Uniprot:F1M0Q5
        Length = 165

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 46/128 (35%), Positives = 74/128 (57%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KL +GGL ++T+ E LR +F  +G  TD ++M+DP T+RSR  GF+T+   E V+  +  
Sbjct:    34 KLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSGFVTYNTVEEVDAAMNA 93

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEET 279
                 +DG+ + PK A  +    RP      KKIF GG+ +DT    V+ YF  +GK++  
Sbjct:    94 RPQKMDGRLVKPKRAVSREDSQRPGTQLTVKKIFEGGIKEDTEEHNVRDYFEHYGKIDMI 153

Query:   280 VMLMDQQT 287
              ++ D+ +
Sbjct:   154 EIMTDRSS 161

 Score = 117 (46.2 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 30/104 (28%), Positives = 51/104 (49%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   +  K+ +GG+   T+ E ++ +F ++G   + V++ D  TKR R  GFVT+   E
Sbjct:    26 PKEPEQLHKLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSGFVTYNTVE 85

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ--ANLLVGKRVILG 344
              VD         +  + V+ K+A  +E  Q     L  K++  G
Sbjct:    86 EVDAAMNARPQKMDGRLVKPKRAVSREDSQRPGTQLTVKKIFEG 129


>UNIPROTKB|F8W646 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022306
            ProteinModelPortal:F8W646 SMR:F8W646 PRIDE:F8W646
            Ensembl:ENST00000547708 ArrayExpress:F8W646 Bgee:F8W646
            Uniprot:F8W646
        Length = 156

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 45/97 (46%), Positives = 65/97 (67%)

Query:   163 KLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRSRGFGFITFAEPETVEKVLKV 222
             KLF+GGLS++T+ E LR +F  +G +TD ++M+DP T+RSRGFGF+T+A  E V+  +  
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query:   223 PIHTLDGKKIDPKHATPKN---RPKIGNRTKKIFVGG 256
               H +DG+ ++PK A  +    RP      KKIFVGG
Sbjct:    75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGG 111

 Score = 183 (69.5 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 40/108 (37%), Positives = 65/108 (60%)

Query:   243 PKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEE 302
             PK   + +K+F+GG+S +T+ E ++++F Q+G + + V++ D  TKR RGFGFVT+   E
Sbjct:     7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66

Query:   303 VVDHICEIHFHMIKNKKVECKKAQPKEAVQ---ANLLVGKRVILGPLG 347
              VD       H +  + VE K+A  +E  Q   A+L V K++ +G  G
Sbjct:    67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV-KKIFVGGFG 113


>UNIPROTKB|D6RBQ9 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOGENOM:HOG000234441 EMBL:AC124016 HGNC:HGNC:5036 ChiTaRS:HNRNPD
            InterPro:IPR012956 Pfam:PF08143 IPI:IPI00963980
            ProteinModelPortal:D6RBQ9 SMR:D6RBQ9 Ensembl:ENST00000503822
            ArrayExpress:D6RBQ9 Bgee:D6RBQ9 Uniprot:D6RBQ9
        Length = 155

 Score = 230 (86.0 bits), Expect = 3.4e-19, P = 3.4e-19
 Identities = 42/95 (44%), Positives = 60/95 (63%)

Query:   143 GKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQRS 202
             G +  +  +   + ++    K+F+GGLSW T+ + L++YF  FG V D  +  DPIT RS
Sbjct:    59 GSAESEGAKIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRS 118

Query:   203 RGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHA 237
             RGFGF+ F E E+V+KV+    H L+GK IDPK A
Sbjct:   119 RGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 153

 Score = 170 (64.9 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 38/99 (38%), Positives = 59/99 (59%)

Query:   228 DGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQT 287
             +G KID      KN    G    K+F+GG+S DT+ +++K YFS+FG+V +  + +D  T
Sbjct:    64 EGAKIDAS----KNEEDEG----KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPIT 115

Query:   288 KRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQ 326
              R RGFGFV F+  E VD + +   H +  K ++ K+A+
Sbjct:   116 GRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAK 154


>TAIR|locus:2157702 [details] [associations]
            symbol:CP31B "chloroplast RNA-binding protein 31B"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0009451 "RNA modification"
            evidence=IMP] [GO:0000023 "maltose metabolic process" evidence=RCA]
            [GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009409
            "response to cold" evidence=RCA] [GO:0009697 "salicylic acid
            biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
            incompatible interaction" evidence=RCA] [GO:0010027 "thylakoid
            membrane organization" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
            diphosphate biosynthetic process, mevalonate-independent pathway"
            evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
            evidence=RCA] [GO:0042742 "defense response to bacterium"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0008266 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AB024031
            eggNOG:COG0724 GO:GO:0009451 HOGENOM:HOG000276232 HSSP:P11940
            ProtClustDB:CLSN2915857 UniGene:At.46085 UniGene:At.7917
            EMBL:AY039868 EMBL:AY077660 IPI:IPI00537317 RefSeq:NP_199836.1
            ProteinModelPortal:Q9FGS0 SMR:Q9FGS0 STRING:Q9FGS0 PaxDb:Q9FGS0
            PRIDE:Q9FGS0 EnsemblPlants:AT5G50250.1 GeneID:835090
            KEGG:ath:AT5G50250 TAIR:At5g50250 InParanoid:Q9FGS0 OMA:AAFRIYV
            PhylomeDB:Q9FGS0 Genevestigator:Q9FGS0 Uniprot:Q9FGS0
        Length = 289

 Score = 228 (85.3 bits), Expect = 5.8e-19, P = 5.8e-19
 Identities = 56/175 (32%), Positives = 94/175 (53%)

Query:   139 VLVNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAV--TDVLIMKD 196
             V V+     + G   P  + P  AKLFVG L +   S+ L   F   G V  ++V+  +D
Sbjct:    92 VTVDESFESEDGVGFP--EPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRD 149

Query:   197 PITQRSRGFGFITFAEPETVEKVL-KVPIHTLDGKKID-----PKHATPKNRPKIGNRTK 250
               T +SRGFGF+T +  E  EK + K     ++G+++      P+ + P+ +P++ +   
Sbjct:   150 --TDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPERQPRVYDAAF 207

Query:   251 KIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEEVVD 305
             +I+VG +  D  +  ++  FS+ GKV +  ++ D++T R RGFGFV   NE  V+
Sbjct:   208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVN 262


>UNIPROTKB|F5H6R6 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 GO:GO:0005634
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0048255
            EMBL:AC124016 HGNC:HGNC:5036 ChiTaRS:HNRNPD IPI:IPI01012829
            ProteinModelPortal:F5H6R6 SMR:F5H6R6 Ensembl:ENST00000541060
            ArrayExpress:F5H6R6 Bgee:F5H6R6 Uniprot:F5H6R6
        Length = 201

 Score = 224 (83.9 bits), Expect = 1.8e-18, P = 1.8e-18
 Identities = 51/116 (43%), Positives = 64/116 (55%)

Query:   225 HTLDGKKIDPKHATPKNRPKIGNRTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMD 284
             H L+GK IDPK A      K     KKIFVGG+S DT  E+++ YF  FG+VE   + MD
Sbjct:     6 HKLNGKVIDPKRAKAM---KTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 62

Query:   285 QQTKRHRGFGFVTFENEEVVDHICEIHFHMIKNKKVECKKAQPKEAVQANLLVGKR 340
              +T + RGF F+TF+ EE V  I E  +H +   K E K A  KE  Q     G R
Sbjct:    63 NKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSR 118

 Score = 169 (64.5 bits), Expect = 3.2e-12, P = 3.2e-12
 Identities = 40/102 (39%), Positives = 54/102 (52%)

Query:   141 VNGKSSGDSGRSTPTGDDPTSAKLFVGGLSWQTSSEKLREYFGMFGAVTDVLIMKDPITQ 200
             +NGK             +P   K+FVGGLS  T  EK+REYFG FG V  + +  D  T 
Sbjct:     8 LNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTN 66

Query:   201 RSRGFGFITFAEPETVEKVLKVPIHTLDGKKIDPKHATPKNR 242
             + RGF FITF E E V+K+++   H +   K + K A  K +
Sbjct:    67 KRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 108

WARNING:  HSPs involving 873 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      398       348   0.00099  116 3  11 22  0.44    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1123
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  220 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.33u 0.09s 32.42t   Elapsed:  00:00:20
  Total cpu time:  32.39u 0.09s 32.48t   Elapsed:  00:00:21
  Start:  Thu Aug 15 14:34:46 2013   End:  Thu Aug 15 14:35:07 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with msi msi msi musashi	protein from Drosophila melanogaster	3.6e-89
BLAST match view associations BLAST with MSI2 MSI2 MSI2 RNA-binding protein Musashi homolog 2	protein from Homo sapiens	1.0e-59
BLAST match view associations BLAST with Msi2 Msi2 Msi2 musashi RNA-binding protein 2	protein from Mus musculus	1.3e-59
BLAST match view associations BLAST with Rbp6 Rbp6 Rbp6 RNA-binding protein 6	protein from Drosophila melanogaster	2.7e-59
BLAST match view associations BLAST with msi2b msi2b msi2b musashi homolog 2b (Drosophila)	gene_product from Danio rerio	8.4e-58
BLAST match view associations BLAST with MSI2 MSI2 MSI2 cDNA FLJ56904, highly similar to RNA-binding protein Musashi homolog 2	protein from Homo sapiens	5.9e-57
BLAST match view associations BLAST with msi2a msi2a msi2a musashi homolog 2a (Drosophila)	gene_product from Danio rerio	5.9e-57
BLAST match view associations BLAST with MSI1 MSI1 MSI1 RNA-binding protein Musashi homolog 1	protein from Homo sapiens	2.0e-56
BLAST match view associations BLAST with Msi1 Msi1 Msi1 musashi RNA-binding protein 1	protein from Mus musculus	2.5e-56
BLAST match view associations BLAST with Msi1 Msi1 Msi1 musashi RNA-binding protein 1	gene from Rattus norvegicus	2.5e-56
BLAST match view associations BLAST with Msi1 Msi1 Msi1 RNA-binding protein Musashi homolog 1	protein from Rattus norvegicus	2.5e-56
BLAST match view associations BLAST with MSI1 MSI1 MSI1 Uncharacterized protein	protein from Bos taurus	5.3e-56
BLAST match view associations BLAST with MSI1 MSI1 MSI1 Uncharacterized protein	protein from Canis lupus familiaris	1.4e-55
BLAST match view associations BLAST with msi1 msi1 msi1 musashi homolog 1 (Drosophila)	gene_product from Danio rerio	1.4e-55
BLAST match view associations BLAST with msi-1 msi-1 msi-1	gene from Caenorhabditis elegans	3.7e-55
BLAST match view associations BLAST with LOC100627974 LOC100627974 LOC100627974 Uncharacterized protein	protein from Sus scrofa	3.2e-49
BLAST match view associations BLAST with HRP1 HRP1 HRP1 Subunit of cleavage factor I	gene from Saccharomyces cerevisiae	8.6e-45
BLAST match view associations BLAST with dazap1 dazap1 dazap1 DAZ associated protein 1	gene_product from Danio rerio	9.6e-44
BLAST match view associations BLAST with dazap1 dazap1 dazap1 DAZ-associated protein 1	protein from Xenopus laevis	3.2e-43
BLAST match view associations BLAST with MSI1 MSI1 MSI1 Uncharacterized protein	protein from Canis lupus familiaris	3.5e-43
BLAST match view associations BLAST with Hnrnpdl Hnrnpdl Hnrnpdl heterogeneous nuclear ribonucleoprotein D-like	gene from Rattus norvegicus	1.5e-41
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Gallus gallus	3.6e-41
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Canis lupus familiaris	4.6e-41
BLAST match view associations BLAST with Dazap1 Dazap1 Dazap1 DAZ associated protein 1	gene from Rattus norvegicus	7.5e-41
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Bos taurus	1.2e-40
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-40
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 DAZ-associated protein 1	protein from Homo sapiens	1.2e-40
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Sus scrofa	1.2e-40
BLAST match view associations BLAST with Dazap1 Dazap1 Dazap1 DAZ associated protein 1	protein from Mus musculus	1.2e-40
BLAST match view associations BLAST with Hrb27C Hrb27C Hrb27C Heterogeneous nuclear ribonucleoprotein at 27C	protein from Drosophila melanogaster	1.7e-40
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Bos taurus	1.1e-39
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Gallus gallus	2.3e-39
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	6.1e-39
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	6.1e-39
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	6.1e-39
BLAST match view associations BLAST with Q9XSY6 Q9XSY6 Q9XSY6 HnRNP A/B related protein	protein from Felis catus	7.8e-39
BLAST match view associations BLAST with HNRPDL HNRPDL HNRPDL Heterogeneous nuclear ribonucleoprotein D-like	protein from Gallus gallus	1.3e-38
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab heterogeneous nuclear ribonucleoprotein A/B	gene from Rattus norvegicus	1.6e-38
BLAST match view associations BLAST with HNRPDL HNRPDL HNRPDL Uncharacterized protein	protein from Bos taurus	2.6e-38
BLAST match view associations BLAST with HNRPDL HNRPDL HNRPDL Uncharacterized protein	protein from Canis lupus familiaris	2.6e-38
BLAST match view associations BLAST with HNRPDL HNRPDL HNRPDL Heterogeneous nuclear ribonucleoprotein D-like	protein from Homo sapiens	2.6e-38
BLAST match view associations BLAST with Hnrnpdl1 Hnrnpdl1 Hnrnpdl1 heterogeneous nuclear ribonucleoprotein D-like	protein from Mus musculus	2.6e-38
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab RCG34663, isoform CRA_a	protein from Rattus norvegicus	3.4e-38
BLAST match view associations BLAST with hnrnpab hnrnpab hnrnpab heterogeneous nuclear ribonucleoprotein A/B	gene_product from Danio rerio	4.3e-38
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	5.5e-38
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab heterogeneous nuclear ribonucleoprotein A/B	protein from Mus musculus	5.5e-38
BLAST match view associations BLAST with hnrnpab hnrnpab hnrnpab Hnrpab-prov protein	protein from Xenopus laevis	7.0e-38
BLAST match view associations BLAST with Hnrpd Hnrpd Hnrpd Heterogeneous nuclear ribonucleoprotein D0	protein from Rattus norvegicus	7.0e-38
BLAST match view associations BLAST with HNRPD HNRPD HNRPD Heterogeneous nuclear ribonucleoprotein D	protein from Bos taurus	8.9e-38
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Uncharacterized protein	protein from Bos taurus	8.9e-38
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	8.9e-38
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Uncharacterized protein	protein from Canis lupus familiaris	1.5e-37
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	1.5e-37
BLAST match view associations BLAST with Hnrnpd Hnrnpd Hnrnpd heterogeneous nuclear ribonucleoprotein D	protein from Mus musculus	1.5e-37
BLAST match view associations BLAST with Hnrpd Hnrpd Hnrpd heterogeneous nuclear ribonucleoprotein D	gene from Rattus norvegicus	1.9e-37
BLAST match view associations BLAST with Hnrnpd Hnrnpd Hnrnpd Heterogeneous nuclear ribonucleoprotein D0	protein from Rattus norvegicus	1.9e-37
BLAST match view associations BLAST with MSI2 MSI2 MSI2 RNA-binding protein Musashi homolog 2	protein from Homo sapiens	2.4e-37
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 DAZ-associated protein 1	protein from Homo sapiens	3.0e-37
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	3.0e-37
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	3.0e-37
BLAST match view associations BLAST with hnrnpd hnrnpd hnrnpd heterogeneous nuclear ribonucleoprotein D	gene_product from Danio rerio	3.9e-37
BLAST match view associations BLAST with hnrnpa0b hnrnpa0b hnrnpa0b heterogeneous nuclear ribonucleoprotein A0b	gene_product from Danio rerio	5.1e-37
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Uncharacterized protein	protein from Gallus gallus	8.0e-37
BLAST match view associations BLAST with zgc:77052 zgc:77052 zgc:77052	gene_product from Danio rerio	1.7e-36
BLAST match view associations BLAST with HNRNPA1L2 HNRNPA1L2 HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1-like 2	protein from Homo sapiens	1.5e-35
BLAST match view associations BLAST with MSI1 MSI1 MSI1 RNA-binding protein Musashi homolog 1	protein from Homo sapiens	1.5e-35
BLAST match view associations BLAST with hnrpdl hnrpdl hnrpdl heterogeneous nuclear ribonucleoprotein D-like	gene_product from Danio rerio	1.5e-35
BLAST match view associations BLAST with HNRNPA0 HNRNPA0 HNRNPA0 Uncharacterized protein	protein from Bos taurus	2.4e-35
BLAST match view associations BLAST with HNRNPA0 HNRNPA0 HNRNPA0 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-35
BLAST match view associations BLAST with LOC100519826 LOC100519826 LOC100519826 Uncharacterized protein	protein from Sus scrofa	2.4e-35
BLAST match view associations BLAST with hnrnpa0a hnrnpa0a hnrnpa0a heterogeneous nuclear ribonucleoprotein A0a	gene_product from Danio rerio	2.4e-35
BLAST match view associations BLAST with AT3G07810 AT3G07810 AT3G07810	protein from Arabidopsis thaliana	2.4e-35
BLAST match view associations BLAST with LOC100859627 LOC100859627 LOC100859627 Uncharacterized protein	protein from Gallus gallus	2.4e-35
BLAST match view associations BLAST with HNRNPA0 HNRNPA0 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0	protein from Homo sapiens	3.1e-35
BLAST match view associations BLAST with AT5G55550 AT5G55550 AT5G55550	protein from Arabidopsis thaliana	3.1e-35
BLAST match view associations BLAST with HNRNPA3 HNRNPA3 HNRNPA3 Uncharacterized protein	protein from Bos taurus	3.1e-35
BLAST match view associations BLAST with HNRNPA3 HNRNPA3 HNRNPA3 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-35
BLAST match view associations BLAST with HNRNPA3 HNRNPA3 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3	protein from Homo sapiens	3.1e-35
BLAST match view associations BLAST with LOC100516520 LOC100516520 LOC100516520 Uncharacterized protein	protein from Sus scrofa	3.1e-35
BLAST match view associations BLAST with LOC100360986 LOC100360986 LOC100360986 mCG1035404-like	gene from Rattus norvegicus	3.1e-35
BLAST match view associations BLAST with Hnrnpa3 Hnrnpa3 Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3	gene from Rattus norvegicus	3.1e-35
BLAST match view associations BLAST with Hnrnpa0 Hnrnpa0 Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0	protein from Mus musculus	3.9e-35
BLAST match view associations BLAST with hnrnpa0l hnrnpa0l hnrnpa0l heterogeneous nuclear ribonucleoprotein A0, like	gene_product from Danio rerio	3.9e-35
BLAST match view associations BLAST with orf19.5989 orf19.5989 orf19.5989	gene_product from Candida albicans	4.0e-35
BLAST match view associations BLAST with sqd sqd sqd squid	protein from Drosophila melanogaster	4.0e-35
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Uncharacterized protein	protein from Gallus gallus	8.3e-35
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Saguinus oedipus	8.3e-35
BLAST match view associations BLAST with AT4G14300 AT4G14300 AT4G14300	protein from Arabidopsis thaliana	1.0e-34