Query psy6493
Match_columns 1321
No_of_seqs 511 out of 4209
Neff 10.7
Searched_HMMs 46136
Date Fri Aug 16 19:31:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6493.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6493hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0040|consensus 100.0 1E-115 3E-120 993.7 142.2 1304 11-1321 1095-2399(2399)
2 KOG0517|consensus 100.0 2E-109 4E-114 964.9 144.3 1096 7-1123 871-1974(2473)
3 KOG0517|consensus 100.0 3E-90 6.6E-95 804.5 140.4 1134 2-1158 437-1584(2473)
4 KOG0040|consensus 100.0 4.5E-83 9.8E-88 728.4 120.7 1121 2-1149 171-1369(2399)
5 COG5126 FRQ1 Ca2+-binding prot 99.8 4.5E-20 9.7E-25 170.8 12.4 146 1162-1320 8-156 (160)
6 cd00176 SPEC Spectrin repeats, 99.8 2.8E-16 6.1E-21 166.8 28.7 210 620-829 2-212 (213)
7 KOG0027|consensus 99.8 5E-18 1.1E-22 164.9 12.4 142 1168-1320 2-149 (151)
8 cd00176 SPEC Spectrin repeats, 99.8 5.7E-16 1.2E-20 164.4 29.2 210 514-723 2-212 (213)
9 KOG4286|consensus 99.7 2.2E-13 4.7E-18 150.4 42.2 509 727-1281 4-578 (966)
10 KOG0035|consensus 99.7 2.5E-17 5.5E-22 190.4 11.7 479 831-1320 395-886 (890)
11 KOG0028|consensus 99.7 9.4E-16 2E-20 136.6 13.3 144 1165-1320 24-170 (172)
12 KOG4286|consensus 99.6 1.9E-13 4.1E-18 150.8 29.2 308 621-938 4-336 (966)
13 KOG0030|consensus 99.6 1.4E-14 2.9E-19 125.6 12.3 138 1167-1320 4-151 (152)
14 KOG0031|consensus 99.6 2.1E-14 4.5E-19 126.8 13.6 135 1165-1319 23-164 (171)
15 PTZ00183 centrin; Provisional 99.5 9.7E-14 2.1E-18 138.5 15.4 145 1164-1320 7-154 (158)
16 PTZ00184 calmodulin; Provision 99.5 5.3E-14 1.1E-18 139.0 12.1 142 1167-1320 4-148 (149)
17 KOG0034|consensus 99.4 3.2E-12 6.9E-17 124.4 13.4 138 1167-1320 26-175 (187)
18 KOG0037|consensus 99.4 2E-12 4.3E-17 123.4 9.6 129 1173-1319 56-187 (221)
19 KOG0044|consensus 99.3 2.4E-11 5.1E-16 118.0 11.5 143 1163-1319 18-174 (193)
20 PF12128 DUF3584: Protein of u 99.2 9E-05 2E-09 97.5 82.6 202 800-1011 711-928 (1201)
21 smart00150 SPEC Spectrin repea 99.1 1.1E-09 2.3E-14 99.6 11.9 99 834-933 2-100 (101)
22 PF12128 DUF3584: Protein of u 99.1 0.00035 7.6E-09 92.1 73.7 200 481-685 710-929 (1201)
23 smart00150 SPEC Spectrin repea 99.1 1.4E-09 3.1E-14 98.8 12.1 100 728-827 2-101 (101)
24 PF00435 Spectrin: Spectrin re 99.1 3.2E-09 6.9E-14 97.4 14.2 104 725-828 2-105 (105)
25 KOG0036|consensus 99.0 1.1E-09 2.4E-14 114.3 10.3 133 1169-1319 9-145 (463)
26 PF00435 Spectrin: Spectrin re 99.0 6.6E-09 1.4E-13 95.2 14.5 104 88-191 2-105 (105)
27 TIGR00606 rad50 rad50. This fa 98.9 0.0018 3.8E-08 86.9 109.6 86 907-1006 913-998 (1311)
28 KOG4223|consensus 98.9 3.2E-09 6.9E-14 108.3 7.9 139 1172-1321 75-229 (325)
29 PLN02964 phosphatidylserine de 98.9 7.2E-09 1.6E-13 120.6 10.7 105 1166-1283 135-243 (644)
30 KOG0037|consensus 98.8 8.6E-09 1.9E-13 98.9 8.6 92 1172-1278 122-215 (221)
31 cd05022 S-100A13 S-100A13: S-1 98.8 1.8E-08 4E-13 85.4 7.3 69 1171-1246 5-76 (89)
32 KOG0044|consensus 98.8 2.8E-08 6.1E-13 96.9 9.5 106 1172-1284 62-176 (193)
33 KOG4223|consensus 98.7 2.8E-08 6E-13 101.6 8.7 135 1172-1316 161-301 (325)
34 KOG0038|consensus 98.7 6.6E-08 1.4E-12 84.7 9.0 97 1219-1320 73-177 (189)
35 COG5126 FRQ1 Ca2+-binding prot 98.7 1.9E-07 4.2E-12 87.4 11.3 67 1172-1245 90-156 (160)
36 KOG0027|consensus 98.6 1.7E-07 3.6E-12 91.3 9.5 105 1174-1282 44-148 (151)
37 cd05027 S-100B S-100B: S-100B 98.6 1.3E-07 2.8E-12 80.7 7.4 69 1171-1246 5-80 (88)
38 PF13499 EF-hand_7: EF-hand do 98.6 5.8E-08 1.3E-12 79.2 5.1 66 1175-1243 1-66 (66)
39 TIGR00606 rad50 rad50. This fa 98.5 0.016 3.4E-07 77.9 103.0 18 307-324 472-489 (1311)
40 KOG0377|consensus 98.5 6.9E-07 1.5E-11 93.9 11.1 133 1174-1319 464-614 (631)
41 smart00027 EH Eps15 homology d 98.5 4.5E-07 9.7E-12 80.1 7.8 70 1168-1246 4-73 (96)
42 PTZ00183 centrin; Provisional 98.4 1.1E-06 2.4E-11 87.5 10.2 99 1175-1282 54-153 (158)
43 PF13499 EF-hand_7: EF-hand do 98.4 1.9E-07 4E-12 76.2 3.2 58 1257-1318 2-66 (66)
44 PF08726 EFhand_Ca_insen: Ca2+ 98.4 1.8E-07 4E-12 73.3 3.0 67 1252-1320 3-69 (69)
45 cd05029 S-100A6 S-100A6: S-100 98.4 9.9E-07 2.1E-11 75.3 7.3 69 1171-1246 7-80 (88)
46 cd05025 S-100A1 S-100A1: S-100 98.4 1.1E-06 2.4E-11 76.8 7.7 68 1172-1246 7-81 (92)
47 cd05026 S-100Z S-100Z: S-100Z 98.4 1.2E-06 2.6E-11 76.2 7.6 73 1171-1246 7-82 (93)
48 PTZ00184 calmodulin; Provision 98.4 2E-06 4.3E-11 84.7 10.0 98 1175-1281 48-146 (149)
49 cd05031 S-100A10_like S-100A10 98.3 1.1E-06 2.4E-11 77.1 7.1 68 1172-1246 6-80 (94)
50 KOG4240|consensus 98.3 0.0061 1.3E-07 73.9 40.1 341 479-828 242-598 (1025)
51 PRK04863 mukB cell division pr 98.3 0.041 9E-07 72.6 93.8 769 150-973 426-1268(1486)
52 KOG0994|consensus 98.3 0.02 4.2E-07 68.8 50.9 122 595-722 1164-1292(1758)
53 cd00213 S-100 S-100: S-100 dom 98.3 1.3E-06 2.9E-11 75.8 7.0 74 1170-1246 4-80 (88)
54 KOG0994|consensus 98.3 0.02 4.4E-07 68.7 56.5 118 174-297 1168-1292(1758)
55 KOG2643|consensus 98.3 1.2E-06 2.6E-11 92.9 7.5 99 1175-1279 234-342 (489)
56 KOG0041|consensus 98.3 2E-06 4.4E-11 80.5 7.8 106 1167-1279 92-199 (244)
57 cd05022 S-100A13 S-100A13: S-1 98.3 5.7E-07 1.2E-11 76.4 3.6 61 1255-1319 8-74 (89)
58 KOG4240|consensus 98.3 0.00031 6.6E-09 84.7 27.1 343 264-615 240-597 (1025)
59 KOG0161|consensus 98.3 0.057 1.2E-06 71.7 111.0 51 483-535 1320-1370(1930)
60 KOG0028|consensus 98.2 9.9E-06 2.1E-10 73.6 10.6 127 1083-1245 44-170 (172)
61 KOG4674|consensus 98.2 0.068 1.5E-06 69.5 113.6 79 327-405 517-599 (1822)
62 PF13833 EF-hand_8: EF-hand do 98.2 2.7E-06 5.8E-11 65.8 4.9 52 1187-1245 1-53 (54)
63 cd00052 EH Eps15 homology doma 98.2 3.5E-06 7.6E-11 69.1 5.8 61 1177-1246 2-62 (67)
64 PF14658 EF-hand_9: EF-hand do 98.1 4.9E-06 1.1E-10 64.1 5.4 61 1178-1245 2-64 (66)
65 KOG0034|consensus 98.1 1.1E-05 2.3E-10 79.3 9.2 103 1176-1284 68-176 (187)
66 cd05023 S-100A11 S-100A11: S-1 98.1 9.6E-06 2.1E-10 69.4 7.5 74 1171-1246 6-81 (89)
67 KOG4251|consensus 98.1 3.9E-06 8.5E-11 80.9 5.4 138 1174-1320 101-264 (362)
68 cd00252 SPARC_EC SPARC_EC; ext 98.1 3.2E-05 6.9E-10 69.5 10.1 64 1169-1243 43-106 (116)
69 cd00051 EFh EF-hand, calcium b 98.0 1.1E-05 2.3E-10 65.3 6.0 61 1176-1243 2-62 (63)
70 cd05026 S-100Z S-100Z: S-100Z 98.0 3.9E-06 8.5E-11 73.0 3.4 61 1255-1319 10-80 (93)
71 KOG0031|consensus 98.0 3.8E-05 8.3E-10 69.2 9.5 108 1102-1244 57-164 (171)
72 cd05027 S-100B S-100B: S-100B 98.0 5.3E-06 1.1E-10 70.9 3.1 61 1255-1319 8-78 (88)
73 cd05029 S-100A6 S-100A6: S-100 97.8 2.9E-05 6.3E-10 66.4 5.4 60 1256-1319 11-78 (88)
74 KOG2562|consensus 97.8 6.4E-05 1.4E-09 81.0 9.1 133 1169-1317 273-421 (493)
75 cd00252 SPARC_EC SPARC_EC; ext 97.8 1.8E-05 4E-10 71.0 4.1 59 1216-1280 47-105 (116)
76 cd05030 calgranulins Calgranul 97.8 5.6E-05 1.2E-09 65.0 6.7 73 1171-1246 5-80 (88)
77 cd05025 S-100A1 S-100A1: S-100 97.8 3.6E-05 7.7E-10 67.4 5.5 61 1255-1319 9-79 (92)
78 PRK04778 septation ring format 97.8 0.19 4.2E-06 60.9 55.6 188 554-759 350-542 (569)
79 cd05031 S-100A10_like S-100A10 97.8 1.8E-05 3.8E-10 69.5 3.0 66 1218-1283 9-79 (94)
80 PRK04863 mukB cell division pr 97.7 0.43 9.2E-06 63.5 100.3 173 755-929 933-1128(1486)
81 cd05023 S-100A11 S-100A11: S-1 97.7 2.4E-05 5.1E-10 67.0 3.3 61 1255-1319 9-79 (89)
82 cd00052 EH Eps15 homology doma 97.7 2.1E-05 4.5E-10 64.5 2.9 54 1222-1279 4-57 (67)
83 smart00027 EH Eps15 homology d 97.7 2.7E-05 5.8E-10 68.8 3.1 63 1217-1283 10-72 (96)
84 cd00213 S-100 S-100: S-100 dom 97.6 6.4E-05 1.4E-09 65.3 3.9 61 1255-1319 8-78 (88)
85 PRK02224 chromosome segregatio 97.5 0.7 1.5E-05 60.4 69.8 17 694-710 624-640 (880)
86 PF00036 EF-hand_1: EF hand; 97.5 6.3E-05 1.4E-09 48.2 2.1 29 1175-1203 1-29 (29)
87 PF12763 EF-hand_4: Cytoskelet 97.5 0.00012 2.7E-09 64.2 4.4 71 1165-1245 1-71 (104)
88 PF06160 EzrA: Septation ring 97.5 0.5 1.1E-05 57.0 54.4 167 130-326 104-272 (560)
89 KOG0036|consensus 97.4 0.00028 6E-09 75.0 6.8 92 1174-1279 82-179 (463)
90 cd00051 EFh EF-hand, calcium b 97.4 0.00048 1E-08 55.4 6.7 61 1219-1281 2-62 (63)
91 PRK04778 septation ring format 97.4 0.62 1.4E-05 56.5 54.0 418 165-615 63-500 (569)
92 PF13833 EF-hand_8: EF-hand do 97.3 0.00034 7.4E-09 54.0 4.5 49 1231-1281 2-51 (54)
93 PF13405 EF-hand_6: EF-hand do 97.3 0.00018 3.9E-09 47.5 2.2 30 1175-1204 1-31 (31)
94 PF00036 EF-hand_1: EF hand; 97.3 0.00033 7.1E-09 45.0 3.2 24 1220-1243 3-26 (29)
95 KOG0161|consensus 97.2 1.7 3.8E-05 58.4 115.3 54 800-853 1566-1627(1930)
96 KOG0030|consensus 97.2 0.002 4.2E-08 57.5 8.2 64 1172-1243 86-149 (152)
97 cd05024 S-100A10 S-100A10: A s 97.2 0.002 4.4E-08 54.2 7.9 71 1172-1246 6-77 (91)
98 PLN02964 phosphatidylserine de 97.2 0.00093 2E-08 78.9 8.2 72 1167-1245 172-243 (644)
99 KOG0035|consensus 97.2 0.00064 1.4E-08 81.1 6.8 316 727-1048 397-730 (890)
100 KOG4674|consensus 97.2 1.8 3.9E-05 57.2 122.5 76 438-513 523-600 (1822)
101 KOG0038|consensus 97.0 0.002 4.3E-08 57.4 6.4 95 1181-1282 78-176 (189)
102 cd05030 calgranulins Calgranul 97.0 0.0014 3E-08 56.5 5.4 58 1257-1318 10-77 (88)
103 KOG0377|consensus 96.8 0.0084 1.8E-07 64.1 10.6 65 1217-1281 547-613 (631)
104 KOG0041|consensus 96.8 0.00084 1.8E-08 63.5 2.9 61 1255-1319 99-162 (244)
105 PF13202 EF-hand_5: EF hand; P 96.7 0.00084 1.8E-08 41.4 1.6 22 1258-1279 2-23 (25)
106 KOG0751|consensus 96.7 0.015 3.2E-07 63.3 11.7 102 1170-1282 32-135 (694)
107 PRK03918 chromosome segregatio 96.7 3.9 8.4E-05 53.7 71.7 14 859-872 824-837 (880)
108 PRK03918 chromosome segregatio 96.7 3.9 8.5E-05 53.6 70.8 10 698-707 641-650 (880)
109 PF13405 EF-hand_6: EF-hand do 96.6 0.0012 2.6E-08 43.6 1.7 27 1256-1282 1-27 (31)
110 PF14788 EF-hand_10: EF hand; 96.6 0.0037 7.9E-08 45.5 4.2 48 1191-1245 2-49 (51)
111 KOG2562|consensus 96.6 0.0082 1.8E-07 65.4 8.7 56 1261-1320 284-343 (493)
112 PF08580 KAR9: Yeast cortical 96.5 3 6.5E-05 51.0 30.7 117 797-923 236-358 (683)
113 KOG2643|consensus 96.5 0.0028 6E-08 68.2 4.6 124 1183-1320 208-346 (489)
114 KOG4251|consensus 96.5 0.0075 1.6E-07 59.0 7.0 91 1222-1316 241-341 (362)
115 KOG4666|consensus 96.5 0.0028 6E-08 65.0 4.3 99 1217-1320 259-359 (412)
116 PF06160 EzrA: Septation ring 96.5 3.2 6.8E-05 50.3 60.1 121 269-394 57-184 (560)
117 PRK12309 transaldolase/EF-hand 96.4 0.0045 9.7E-08 69.3 5.8 71 1234-1318 313-383 (391)
118 PRK12309 transaldolase/EF-hand 96.4 0.012 2.6E-07 65.9 9.1 53 1173-1245 333-385 (391)
119 cd05024 S-100A10 S-100A10: A s 96.4 0.0037 7.9E-08 52.7 3.7 57 1257-1318 10-74 (91)
120 PF13202 EF-hand_5: EF hand; P 96.4 0.0021 4.5E-08 39.7 1.6 25 1176-1200 1-25 (25)
121 KOG0169|consensus 96.3 0.033 7.2E-07 65.2 11.9 139 1165-1320 127-274 (746)
122 KOG0751|consensus 96.3 0.027 5.8E-07 61.4 10.3 97 1175-1281 109-205 (694)
123 KOG0046|consensus 96.2 0.0095 2.1E-07 65.6 6.9 77 1165-1246 10-86 (627)
124 PF13514 AAA_27: AAA domain 96.1 8.6 0.00019 51.4 85.9 319 330-682 148-483 (1111)
125 PF14658 EF-hand_9: EF-hand do 96.1 0.012 2.7E-07 45.8 4.8 21 1260-1280 3-23 (66)
126 KOG4065|consensus 95.9 0.011 2.3E-07 50.4 4.1 34 1280-1317 109-142 (144)
127 PF10591 SPARC_Ca_bdg: Secrete 95.9 0.0042 9E-08 56.1 1.8 61 1173-1242 53-113 (113)
128 PF08580 KAR9: Yeast cortical 95.8 7 0.00015 48.0 33.5 281 514-816 31-358 (683)
129 PRK02224 chromosome segregatio 95.7 11 0.00024 49.4 80.1 41 696-736 508-549 (880)
130 PF10174 Cast: RIM-binding pro 95.3 11 0.00024 46.7 68.9 26 552-577 514-539 (775)
131 KOG4666|consensus 95.2 0.03 6.5E-07 57.8 5.3 100 1174-1282 259-358 (412)
132 COG5069 SAC6 Ca2+-binding acti 95.2 0.63 1.4E-05 51.2 15.3 231 1060-1320 375-611 (612)
133 KOG0996|consensus 95.2 13 0.00027 46.8 72.9 84 450-535 446-530 (1293)
134 KOG1029|consensus 94.5 0.22 4.8E-06 57.7 10.2 130 1168-1319 10-256 (1118)
135 PF06008 Laminin_I: Laminin Do 94.2 9.6 0.00021 41.2 26.5 134 645-792 117-251 (264)
136 KOG4065|consensus 94.2 0.041 8.9E-07 47.0 3.0 75 1166-1242 61-142 (144)
137 PF06008 Laminin_I: Laminin Do 93.7 12 0.00026 40.4 25.9 190 57-262 56-252 (264)
138 KOG0971|consensus 93.5 23 0.00051 42.9 75.4 57 480-536 756-819 (1243)
139 TIGR02169 SMC_prok_A chromosom 93.1 47 0.001 45.4 85.9 54 800-853 983-1038(1164)
140 KOG1955|consensus 92.8 0.23 5E-06 54.4 6.4 70 1167-1245 224-293 (737)
141 PF14643 DUF4455: Domain of un 92.6 27 0.00059 41.4 51.2 207 585-827 59-273 (473)
142 smart00054 EFh EF-hand, calciu 92.4 0.1 2.2E-06 33.3 2.1 27 1176-1202 2-28 (29)
143 PF12763 EF-hand_4: Cytoskelet 92.0 0.31 6.7E-06 43.1 5.2 61 1217-1282 10-70 (104)
144 smart00054 EFh EF-hand, calciu 91.5 0.12 2.6E-06 33.0 1.7 23 1258-1280 3-25 (29)
145 KOG0046|consensus 91.4 0.17 3.8E-06 56.2 3.6 60 1256-1320 20-85 (627)
146 PF14788 EF-hand_10: EF hand; 91.2 0.34 7.4E-06 35.6 3.7 47 1233-1281 1-47 (51)
147 PF10591 SPARC_Ca_bdg: Secrete 90.7 0.14 3.1E-06 46.2 1.9 24 1256-1279 55-78 (113)
148 PF05042 Caleosin: Caleosin re 90.1 3 6.4E-05 40.1 9.9 31 1177-1207 10-40 (174)
149 PF14643 DUF4455: Domain of un 89.7 51 0.0011 39.2 53.3 346 268-667 61-423 (473)
150 PF09279 EF-hand_like: Phospho 89.6 0.45 9.8E-06 40.5 4.0 63 1218-1281 1-67 (83)
151 COG1196 Smc Chromosome segrega 89.1 1E+02 0.0022 41.8 91.0 66 1017-1082 963-1029(1163)
152 PLN02952 phosphoinositide phos 88.3 1.4 3E-05 52.4 7.9 86 1230-1320 13-110 (599)
153 PF13514 AAA_27: AAA domain 88.2 1.1E+02 0.0024 41.2 99.8 313 117-463 147-478 (1111)
154 PF09279 EF-hand_like: Phospho 87.6 0.53 1.2E-05 40.1 3.1 66 1175-1246 1-70 (83)
155 KOG4673|consensus 84.6 94 0.002 36.8 64.0 52 904-958 905-956 (961)
156 TIGR02169 SMC_prok_A chromosom 84.4 1.8E+02 0.0038 39.9 90.9 22 907-928 983-1004(1164)
157 COG0419 SbcC ATPase involved i 84.2 1.5E+02 0.0033 38.9 68.7 64 332-395 315-378 (908)
158 COG1196 Smc Chromosome segrega 83.9 1.8E+02 0.0038 39.5 94.3 27 270-296 374-400 (1163)
159 KOG0933|consensus 83.2 1.4E+02 0.003 37.6 69.8 45 849-894 727-771 (1174)
160 KOG1265|consensus 83.1 5.6 0.00012 47.9 9.2 77 1234-1320 205-299 (1189)
161 KOG0971|consensus 83.0 1.3E+02 0.0028 37.2 74.7 63 727-789 906-973 (1243)
162 KOG0976|consensus 82.9 1.2E+02 0.0026 36.7 57.3 77 482-560 369-449 (1265)
163 TIGR02168 SMC_prok_B chromosom 82.1 2.2E+02 0.0047 39.1 88.7 13 1026-1038 967-979 (1179)
164 TIGR03185 DNA_S_dndD DNA sulfu 82.0 1.5E+02 0.0032 37.2 32.7 59 303-364 395-453 (650)
165 TIGR02168 SMC_prok_B chromosom 80.9 2.3E+02 0.0051 38.8 90.6 13 1025-1037 994-1006(1179)
166 PRK01156 chromosome segregatio 80.8 2E+02 0.0043 37.9 69.4 21 343-363 473-493 (895)
167 PF05667 DUF812: Protein of un 79.6 1.6E+02 0.0034 35.9 31.8 80 228-317 507-589 (594)
168 PRK01156 chromosome segregatio 78.2 2.3E+02 0.0051 37.2 71.8 11 859-869 837-847 (895)
169 PRK10929 putative mechanosensi 77.4 2.5E+02 0.0054 37.1 42.3 60 161-220 104-164 (1109)
170 PF01576 Myosin_tail_1: Myosin 77.3 0.75 1.6E-05 58.5 0.0 25 659-683 666-690 (859)
171 KOG0978|consensus 77.0 1.9E+02 0.0041 35.5 62.2 31 373-403 260-290 (698)
172 KOG3555|consensus 76.6 2.1 4.6E-05 45.1 2.9 60 1175-1245 251-310 (434)
173 PF00038 Filament: Intermediat 75.6 1.4E+02 0.003 33.3 30.5 23 265-287 162-184 (312)
174 KOG0042|consensus 75.6 3.7 8E-05 46.9 4.6 74 1167-1247 586-659 (680)
175 KOG3555|consensus 75.0 4.7 0.0001 42.7 4.9 98 1175-1282 212-309 (434)
176 KOG2243|consensus 74.7 3.1 6.6E-05 51.4 4.0 54 1259-1320 4061-4120(5019)
177 PF05557 MAD: Mitotic checkpoi 74.0 28 0.0006 44.1 12.5 28 818-845 617-646 (722)
178 PF05557 MAD: Mitotic checkpoi 73.8 21 0.00045 45.3 11.4 30 712-741 617-648 (722)
179 PF01576 Myosin_tail_1: Myosin 73.7 1.1 2.3E-05 57.1 0.0 22 514-535 210-231 (859)
180 PF04912 Dynamitin: Dynamitin 73.4 1.8E+02 0.0039 33.6 25.1 57 546-603 88-144 (388)
181 KOG1707|consensus 73.3 11 0.00024 43.8 7.7 144 1164-1318 185-375 (625)
182 KOG4578|consensus 73.0 2 4.3E-05 44.9 1.7 55 1260-1318 338-396 (421)
183 KOG4578|consensus 71.8 2.7 5.7E-05 44.1 2.3 70 1170-1245 329-398 (421)
184 KOG0998|consensus 71.1 4.3 9.3E-05 51.3 4.4 139 1167-1319 122-344 (847)
185 PF12325 TMF_TATA_bd: TATA ele 69.7 91 0.002 28.6 12.2 80 114-193 10-102 (120)
186 PF12325 TMF_TATA_bd: TATA ele 69.4 93 0.002 28.5 11.9 83 4-86 7-101 (120)
187 PF10498 IFT57: Intra-flagella 69.3 1.5E+02 0.0033 33.4 15.3 25 60-84 241-265 (359)
188 KOG0996|consensus 67.5 3.7E+02 0.0081 34.8 82.2 58 241-298 448-505 (1293)
189 KOG2243|consensus 66.1 80 0.0017 40.1 12.8 58 1178-1243 4061-4118(5019)
190 KOG0250|consensus 65.7 3.9E+02 0.0085 34.4 61.5 81 859-940 730-813 (1074)
191 PLN02952 phosphoinositide phos 65.1 30 0.00064 41.6 9.3 90 1187-1282 13-109 (599)
192 PF15070 GOLGA2L5: Putative go 64.7 3.4E+02 0.0074 33.3 40.9 71 223-293 150-223 (617)
193 COG4477 EzrA Negative regulato 64.6 2.8E+02 0.0061 32.4 51.2 135 131-285 108-242 (570)
194 KOG4673|consensus 63.2 3.3E+02 0.0071 32.7 63.7 70 727-811 583-652 (961)
195 KOG3866|consensus 62.4 7.7 0.00017 40.3 3.4 68 1177-1246 247-325 (442)
196 PF11802 CENP-K: Centromere-as 61.5 2.2E+02 0.0048 30.1 16.9 121 625-751 23-147 (268)
197 COG5185 HEC1 Protein involved 61.4 2.9E+02 0.0063 31.4 32.2 52 161-212 377-429 (622)
198 PF04065 Not3: Not1 N-terminal 61.4 1.2E+02 0.0025 31.7 11.5 87 58-145 17-106 (233)
199 KOG1707|consensus 61.2 10 0.00022 44.1 4.4 73 1164-1245 305-377 (625)
200 KOG1510|consensus 61.2 82 0.0018 28.9 8.9 44 1079-1122 76-119 (139)
201 KOG0933|consensus 61.1 4.5E+02 0.0097 33.5 77.9 103 517-619 713-815 (1174)
202 PF04849 HAP1_N: HAP1 N-termin 60.5 2.5E+02 0.0055 30.5 24.2 58 240-301 69-126 (306)
203 PF10498 IFT57: Intra-flagella 60.1 3E+02 0.0065 31.2 17.0 59 131-193 249-307 (359)
204 KOG4807|consensus 59.5 2.7E+02 0.0059 30.5 28.2 140 905-1051 423-574 (593)
205 PF00261 Tropomyosin: Tropomyo 59.3 2.4E+02 0.0052 29.8 30.4 26 165-190 7-32 (237)
206 KOG3866|consensus 57.2 5.1 0.00011 41.6 1.1 46 1192-1244 225-271 (442)
207 COG0419 SbcC ATPase involved i 57.0 5.8E+02 0.013 33.6 70.1 62 227-288 316-377 (908)
208 PF00038 Filament: Intermediat 56.4 3.2E+02 0.007 30.4 27.8 20 905-924 164-183 (312)
209 KOG0972|consensus 55.8 2.7E+02 0.0059 29.3 13.4 109 990-1112 218-326 (384)
210 PF05517 p25-alpha: p25-alpha 55.1 48 0.001 32.2 7.4 68 1176-1247 4-71 (154)
211 PF14735 HAUS4: HAUS augmin-li 54.7 2.8E+02 0.0061 29.2 21.3 60 1019-1078 166-225 (238)
212 KOG1955|consensus 51.6 14 0.00031 41.2 3.4 61 1255-1319 231-292 (737)
213 PF04849 HAP1_N: HAP1 N-termin 51.4 3.6E+02 0.0078 29.4 25.5 28 270-297 274-301 (306)
214 PF04912 Dynamitin: Dynamitin 51.0 4.4E+02 0.0096 30.4 23.7 53 442-497 92-144 (388)
215 KOG0250|consensus 48.9 7.2E+02 0.016 32.2 62.9 104 432-535 729-834 (1074)
216 PF08429 PLU-1: PLU-1-like pro 46.3 4.8E+02 0.01 29.4 22.0 29 101-130 2-30 (335)
217 PF14513 DAG_kinase_N: Diacylg 45.5 35 0.00076 32.1 4.5 70 1189-1268 6-82 (138)
218 KOG4347|consensus 45.4 24 0.00051 41.6 4.1 60 1215-1277 553-612 (671)
219 TIGR03545 conserved hypothetic 45.0 6.2E+02 0.013 30.7 15.9 141 378-538 164-311 (555)
220 KOG0995|consensus 43.5 6.3E+02 0.014 30.0 37.0 127 438-574 221-361 (581)
221 PF10168 Nup88: Nuclear pore c 43.5 7.8E+02 0.017 31.1 21.7 133 9-153 532-665 (717)
222 PRK11281 hypothetical protein; 43.4 9.6E+02 0.021 32.1 44.7 58 163-220 125-183 (1113)
223 KOG0169|consensus 42.4 3.7E+02 0.0081 33.1 13.1 96 1175-1281 173-272 (746)
224 PF09069 EF-hand_3: EF-hand; 42.0 1E+02 0.0022 26.6 6.3 66 1174-1245 3-75 (90)
225 KOG0998|consensus 39.7 16 0.00034 46.4 1.8 72 1166-1246 275-346 (847)
226 KOG0978|consensus 35.7 9.5E+02 0.021 29.8 60.4 52 34-86 23-74 (698)
227 PF03915 AIP3: Actin interacti 35.4 7.7E+02 0.017 28.6 16.0 24 196-219 216-239 (424)
228 PF05667 DUF812: Protein of un 35.3 9.3E+02 0.02 29.6 33.7 35 332-366 447-481 (594)
229 PF00261 Tropomyosin: Tropomyo 34.6 5.8E+02 0.013 27.0 29.3 49 276-324 5-54 (237)
230 PF10174 Cast: RIM-binding pro 34.5 1.1E+03 0.023 30.1 79.8 80 483-574 341-421 (775)
231 PF08726 EFhand_Ca_insen: Ca2+ 33.7 27 0.00059 28.2 1.6 25 1175-1200 7-31 (69)
232 PHA02562 46 endonuclease subun 33.5 9.8E+02 0.021 29.3 31.6 23 699-721 332-354 (562)
233 PF09069 EF-hand_3: EF-hand; 33.4 48 0.001 28.5 3.1 25 1219-1244 5-29 (90)
234 TIGR03185 DNA_S_dndD DNA sulfu 33.4 1.1E+03 0.023 29.7 36.2 60 514-581 232-291 (650)
235 cd00179 SynN Syntaxin N-termin 33.2 4.5E+02 0.0097 25.3 12.6 66 982-1048 3-68 (151)
236 KOG0976|consensus 32.7 1E+03 0.023 29.4 59.2 79 585-665 366-448 (1265)
237 PF11802 CENP-K: Centromere-as 32.6 6.4E+02 0.014 26.9 18.3 121 731-857 23-147 (268)
238 PHA02562 46 endonuclease subun 32.3 1E+03 0.022 29.2 32.0 27 57-84 154-180 (562)
239 KOG3647|consensus 31.2 6.4E+02 0.014 26.4 12.0 48 1024-1071 126-173 (338)
240 PF05377 FlaC_arch: Flagella a 30.9 1.9E+02 0.0042 22.2 5.4 37 1086-1122 13-49 (55)
241 PF09726 Macoilin: Transmembra 29.8 1.2E+03 0.026 29.3 23.6 211 11-222 426-665 (697)
242 KOG3958|consensus 29.6 7.2E+02 0.016 26.6 18.2 173 83-259 187-369 (371)
243 PF11887 DUF3407: Protein of u 29.6 7.1E+02 0.015 26.9 12.1 18 57-74 32-49 (267)
244 PF06320 GCN5L1: GCN5-like pro 29.5 4.4E+02 0.0096 24.3 8.9 52 57-111 51-102 (121)
245 PF04157 EAP30: EAP30/Vps36 fa 28.9 2.4E+02 0.0053 29.5 8.3 84 1194-1278 61-158 (223)
246 KOG4302|consensus 28.7 1.2E+03 0.026 28.8 43.3 173 163-367 15-195 (660)
247 COG1340 Uncharacterized archae 28.6 7.9E+02 0.017 26.7 25.7 267 540-812 1-274 (294)
248 PF08317 Spc7: Spc7 kinetochor 28.5 8.7E+02 0.019 27.2 26.3 35 330-364 207-241 (325)
249 PRK10361 DNA recombination pro 27.4 1.1E+03 0.023 27.9 17.0 139 977-1122 35-186 (475)
250 PRK10929 putative mechanosensi 27.1 1.6E+03 0.036 29.9 45.9 56 57-112 106-162 (1109)
251 PF04156 IncA: IncA protein; 27.1 6.2E+02 0.013 25.6 10.8 109 80-192 80-191 (191)
252 COG4477 EzrA Negative regulato 26.1 1.1E+03 0.025 27.8 54.1 55 347-405 112-166 (570)
253 PF09660 DUF2397: Protein of u 26.1 1.2E+03 0.026 27.9 15.0 79 1016-1097 139-217 (486)
254 PF15070 GOLGA2L5: Putative go 26.0 1.3E+03 0.029 28.5 47.5 76 435-510 151-227 (617)
255 PF09728 Taxilin: Myosin-like 25.9 9.4E+02 0.02 26.7 29.2 267 540-817 17-307 (309)
256 PF08429 PLU-1: PLU-1-like pro 25.9 9.8E+02 0.021 26.9 23.2 30 313-343 2-31 (335)
257 PRK11637 AmiB activator; Provi 25.3 1.1E+03 0.025 27.5 27.9 227 884-1122 21-247 (428)
258 PF07106 TBPIP: Tat binding pr 25.2 6.3E+02 0.014 24.9 10.1 70 3-75 61-131 (169)
259 KOG4347|consensus 24.6 53 0.0011 38.9 2.5 57 1175-1239 556-612 (671)
260 PF00804 Syntaxin: Syntaxin; 24.0 4.9E+02 0.011 22.7 10.2 67 549-616 4-70 (103)
261 PF12252 SidE: Dot/Icm substra 23.6 1.7E+03 0.037 28.9 34.5 356 6-465 1053-1420(1439)
262 cd07665 BAR_SNX1 The Bin/Amphi 23.6 8.8E+02 0.019 25.5 23.2 116 57-189 77-196 (234)
263 PF03962 Mnd1: Mnd1 family; I 23.4 7.8E+02 0.017 24.9 14.1 96 11-106 60-168 (188)
264 cd07313 terB_like_2 tellurium 23.2 1.2E+02 0.0026 27.0 4.1 80 1188-1277 13-94 (104)
265 TIGR03545 conserved hypothetic 23.2 1.4E+03 0.031 27.8 17.5 105 697-827 164-268 (555)
266 PF13949 ALIX_LYPXL_bnd: ALIX 23.1 1E+03 0.022 26.1 26.9 72 546-619 194-269 (296)
267 PF07304 SRA1: Steroid recepto 23.0 4.5E+02 0.0097 25.7 8.2 54 481-534 68-134 (157)
268 COG4942 Membrane-bound metallo 23.0 1.2E+03 0.026 26.9 21.5 198 127-324 38-242 (420)
269 PRK10869 recombination and rep 22.9 1.4E+03 0.031 27.8 24.6 39 753-791 292-330 (553)
270 COG0497 RecN ATPase involved i 22.8 1.4E+03 0.03 27.6 27.1 258 335-627 113-387 (557)
271 PRK11546 zraP zinc resistance 22.1 7E+02 0.015 23.8 10.4 56 330-385 45-100 (143)
272 PF10168 Nup88: Nuclear pore c 22.0 1.7E+03 0.036 28.2 22.1 30 548-577 635-664 (717)
273 PF14735 HAUS4: HAUS augmin-li 21.5 9.7E+02 0.021 25.3 20.6 172 974-1153 18-191 (238)
274 PF00404 Dockerin_1: Dockerin 21.0 1E+02 0.0022 18.3 2.0 16 1184-1199 1-16 (21)
275 KOG1264|consensus 21.0 1.4E+02 0.0031 36.3 5.1 144 1167-1320 136-293 (1267)
276 PF08414 NADPH_Ox: Respiratory 21.0 2.2E+02 0.0049 24.8 4.8 61 1173-1246 29-93 (100)
277 PLN02230 phosphoinositide phos 21.0 1.3E+02 0.0027 36.5 4.8 69 1215-1284 27-103 (598)
278 COG3883 Uncharacterized protei 20.7 1.1E+03 0.023 25.4 20.8 68 548-619 41-108 (265)
279 PF15450 DUF4631: Domain of un 20.3 1.5E+03 0.032 26.9 54.2 29 270-298 219-248 (531)
No 1
>KOG0040|consensus
Probab=100.00 E-value=1.4e-115 Score=993.69 Aligned_cols=1304 Identities=71% Similarity=1.081 Sum_probs=1264.0
Q ss_pred CHHHHHHHHHhhHhHHHHHhhhHHHHHHHHHHHHHHHhcCCchHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy6493 11 DLEQVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQLMSLGQTEAALKIQTQLQDLNQKWTSLQQLTAERATQLGSAHEVQ 90 (1321)
Q Consensus 11 d~~~~~~~~~~~~~l~~el~~~~~~v~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~l~~~ 90 (1321)
+++.|..++.++..|..++.+..+++..++..|+.|...|..+....|+.. ++.+|..|.....++...|.++..++
T Consensus 1095 dle~V~~lqkKfddf~~dlkane~rLre~n~vAd~l~~~g~t~~~~~irqq---ln~rw~~Lqr~~~E~~q~lgsahevq 1171 (2399)
T KOG0040|consen 1095 DLEQVEVLQKKFDDFQKDLKANEVRLRDINKVADDLTSEGQTEEAAQIRQQ---LNARWRSLQRLAEERRQLLGSAHEVQ 1171 (2399)
T ss_pred cHHHHHHHHHHHHHhhhhhccChHHHHHHHHHHHhccccccCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 899999999999999999999999999999999999988755555477777 99999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q psy6493 91 RFHRDVDETKDWIQEKDEALNNNDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRLMQTHPETAEQTYAKQKE 170 (1321)
Q Consensus 91 ~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~ 170 (1321)
.|+....+...|+.++-..|+..++|.++.++...+.+|+.+.+++.+....|..|...+..|.+++|+.+..++.+-.+
T Consensus 1172 ~fhrd~detk~~i~ek~~al~~~d~g~dl~svQalqrkheg~erdla~L~Dkvt~l~e~a~rLtqshp~~aeq~q~qk~e 1251 (2399)
T KOG0040|consen 1172 RFHRDADETKEWIEEKCQALNADDPGSDLRSVQALQRKHEGFERDLAALGDKVTSLGETAERLSQSHPDAAEDLQRKQME 1251 (2399)
T ss_pred HHHHhhHHHHHHHHHHHHhhccccccchHHHHHHHHHHhccchhchHHHhhHHHHHHHHHHHhhhcCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHHHHHHHHHHhhccchHH
Q psy6493 171 INEEWTQLTAKANTRKEKLLDSYDLQRFLSDYRDLMSWINSMMGLVSSDELANDVTGAEALLERHQEHRTEIDARTGTFQ 250 (1321)
Q Consensus 171 l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~el~~~~~~~~ 250 (1321)
++..|.+|......|...|-..+.++.|.++..++..|+..+...+.+.+.+.|+...+..++.|+....+++.+.+.++
T Consensus 1252 lne~w~dl~s~~~~Rkekl~ds~d~~rfLs~~rdl~~wi~sm~~lvss~ela~d~tg~eAllerhqe~rte~daRa~tfq 1331 (2399)
T KOG0040|consen 1252 LNEAWEDLQGRAKDRKEKLLDSYDLQRFLSDYRDLMNWINSIGGLVSSQELANDVTGAEALLERHQEHRTEIDARAGTFQ 1331 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcchhhhHHHhhhhhhHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhccCCCCCC
Q psy6493 251 AFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLELQLFYRDCEQAENWMSAREAFLNAEEVDSK 330 (1321)
Q Consensus 251 ~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~~~~~~~~ 330 (1321)
.+.+.|+.++++++.+++.+...+..+.-....+...|..|...|+++++++-|..+|.....|+..-+..+ ..+.+ +
T Consensus 1332 A~eqf~~~ll~~~h~As~eie~kl~~~~l~r~~le~awv~rr~~ldq~lelqLf~~dceq~e~~maare~~l-~dD~~-s 1409 (2399)
T KOG0040|consen 1332 AFEQFGNELLDSGHYASPEIEKKLQAVKLERDDLEKAWVKRRKILDQCLELQLFQRDCEQAESWMSAREAFL-ADDKS-S 1409 (2399)
T ss_pred HHHHHHHHHHhccCcCCHHHHHHHHHHHhhccchHHHHHHHHHHHHhhhhHHHHHhhhHHHHHHHHHHHHhh-ccccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 65656 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy6493 331 TDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQF 410 (1321)
Q Consensus 331 ~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~~~~~f 410 (1321)
.+.+...+++|+.|-..+..+...+..+.-.+.+|+..++++.+.+..+...+-+||..+...+.+.+..|..+..+++|
T Consensus 1410 ~D~veAl~kk~edfdkAi~~qeqkit~l~~~a~~lia~~hya~e~i~~~R~~vlDrwr~lk~~Li~krtklg~~qTlqqf 1489 (2399)
T KOG0040|consen 1410 LDSVEALIKKHEDFDKAINAQEEKIAALQHFAESLIADNHYAKEEIATRRQQVLDRWRALKAQLIEKRSKLGDSQTLQQF 1489 (2399)
T ss_pred cchHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhhhcccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCCCCHHHHHHHHHHH
Q psy6493 411 SRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASI 490 (1321)
Q Consensus 411 ~~~~~~l~~Wl~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~l 490 (1321)
..++.++..|+.+++..++++++.||.+++...++|+.|..+|..+...+..++..|..+++. .|.+....+...+..+
T Consensus 1490 ~rd~deiE~wi~Ek~~~a~eesykD~tniq~k~qk~qaf~~el~~~sd~i~~vi~~gN~lie~-~c~g~e~a~~~~l~~l 1568 (2399)
T KOG0040|consen 1490 SRDADEIENWISEKLQTACDESYKDPTNIQSKHQKHQAFEAELHANSDRIHGVINMGNSLIER-SCDGNEDAVKARLEQL 1568 (2399)
T ss_pred HhhHHHHHHHHHHHHHHhhhhcccCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccchh-hhcccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998 7778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 491 ADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKD 570 (1321)
Q Consensus 491 ~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei~~~~~~v~~ 570 (1321)
...|+.+.....++..+|..+...+.|...+.++.-|+.+++..+.+.+.+.+++++...|++|+.+..++.++...+..
T Consensus 1569 ~d~w~~l~~~t~ek~~klKea~kq~~f~t~Ikd~~fwl~eve~ll~~ed~~kdLasv~nlLkkhqlle~di~a~ed~~kd 1648 (2399)
T KOG0040|consen 1569 ADQWDHLVEKTTEKSKKLKEANKQQRFNTAIKDLEFWLSEVETLLASEDYGKDLASVGNLLKKHQLLEADIVAHEDRLKD 1648 (2399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhhcCCcCCCCH
Q psy6493 571 MNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDL 650 (1321)
Q Consensus 571 l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~ 650 (1321)
++..+..++.++.++...+.++...++++|..++..+..|+..|..+..+++|++++.+...||.++...+++.++|.++
T Consensus 1649 ~n~qadSll~s~~f~~~~i~dkr~~i~~r~~~V~~laa~~r~kl~ea~~L~qff~d~~Deeswikek~l~V~sedygrdl 1728 (2399)
T KOG0040|consen 1649 LNTQADSLLESGQFDTDQIVEKRDNINKRFLNVKELAAARRAKLNEALALHQFFRDIDDEESWIKEKKLLVSSDDYGRDL 1728 (2399)
T ss_pred hhHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccchhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 651 TGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFL 730 (1321)
Q Consensus 651 ~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~ 730 (1321)
..++...++|+.+..++..|+|.+..|...|+.|...+..+...|..++..+...|..|......|..+|...+.++.|.
T Consensus 1729 ~gVqnl~kkhkrle~el~~hepaiQ~v~~~~ekl~d~a~vg~~ei~~rl~~~~~~w~~lk~la~~r~~~l~es~~~Q~f~ 1808 (2399)
T KOG0040|consen 1729 TGVQNLRKKHKRLEAELAAHEPAIQNVLDMGEKLKDKAAVGVEEIQQRLAQFVEHWEELKELAAARGQKLEESLEYQQFL 1808 (2399)
T ss_pred hhhHHHHHHhchhhhhhhhccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999777778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHH
Q psy6493 731 AKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQL 810 (1321)
Q Consensus 731 ~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~ 810 (1321)
...++.+.|+.+....+...++|.++..++.++.+|.+|..+...++..|..+...|..++.......+.|..++..++.
T Consensus 1809 ~~~eeeEaWinek~~l~~~~d~gd~laaiq~Ll~kh~a~e~d~~~hK~rV~~~~~~g~dll~~~~h~~~~I~sk~~~l~~ 1888 (2399)
T KOG0040|consen 1809 ANVEEEEAWINEKQQLLVSEDYGDTLAAVQGLLKKHEAFETDFTVHKDRVQDVCAQGEDLINKVNHHEEQISSKCEQLNE 1888 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhchHHHHHHhhhhhhHHHHHHHHHhh
Confidence 99999999999999999888999999999999999999999999999999999999999999977777789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcccccCCCHHHHHHHHHhHHHHHHhhhhhhhhhHHHH
Q psy6493 811 KLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNI 890 (1321)
Q Consensus 811 ~~~~l~~~~~~r~~~Le~~~~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 890 (1321)
+-..+...+..|..++.....+.+|.-.+.-+.+|+...+..+.+..+|.++.+.+.++.+..+|-..+..+.++.+..+
T Consensus 1889 k~~~l~~~~~~~k~kl~dn~a~~qf~wk~dVveswi~~ke~~~k~e~~G~dl~~~q~ll~kQ~T~dasl~aF~QE~~~~i 1968 (2399)
T KOG0040|consen 1889 KLPSLEKAAAARKAQLEDNSAFLQFNWKADVVESWIADKENSLKTDDFGRDLSSVQTLLTKQETFDAGLQAFQQEGIPNI 1968 (2399)
T ss_pred cchhHHHHHHhHHHhhhhhHHHHHhhhhhhhhHHhhhhHHHHHHhhhhhhhHHhhhhHhhHHHHHHhhhhhhHHHhHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHhhHHhhhhhcCC
Q psy6493 891 TTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNSWFENAEEDLTD 970 (1321)
Q Consensus 891 ~~~~~~l~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f~~~~~~~~~wl~~~e~~l~~ 970 (1321)
..+-+.|+...+..+++|..+-..+-.+|..+......++++|-++...++.++++..-|...+..+..|...++..+..
T Consensus 1969 telkdql~~a~hnQSdAi~kr~l~l~~rw~~l~~~s~~~~kkLLe~Q~~fkk~ee~~l~faKkaSafNwwfenaEE~l~~ 2048 (2399)
T KOG0040|consen 1969 TALKDQLISAQHNQSKAIEKRHAALIKRWQQLLAASAARRQKLLEMQSQFRKIEDLFLTFAKKASAFNSWFENAEEDLTD 2048 (2399)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhHhcccc
Confidence 99999999988888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 971 PVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKE 1050 (1321)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~ 1050 (1321)
|..+...+++..+...|..|...+...+..+..+..+...+.+.+.+++|+++.++..|..+|..|...+.+|.+.|..+
T Consensus 2049 ~~~~ns~~Ei~~l~~~h~~f~~sls~a~~df~~l~~ld~~iks~~v~~~pytw~t~e~Le~tw~~L~~iI~eR~~el~~E 2128 (2399)
T KOG0040|consen 2049 PVRCNSLEEIRALRDAHEDFQASLSSAQADFKQLAELDQQIKSFNVGSNPYTWFTMEALEETWRNLQQIISERERELDKE 2128 (2399)
T ss_pred cccccchHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHHhhccccc
Q psy6493 1051 ATRQDENDALRKEFAKHANAFHQWLTETRTSMMEG-TGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNR 1129 (1321)
Q Consensus 1051 ~~~~~~~~~~~~~f~~~~~~l~~wl~~~~~~~~~~-~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~~~~~~~~ 1129 (1321)
.+|+..|+.+|++|++.++.+..||.+++..+..+ ++++++|++.++.+..+|+.+...+..|+++|..|..+.|.+|.
T Consensus 2129 ~~Rq~~N~klc~efa~~a~tfh~wi~etr~el~~~~sgtLE~Qleal~~k~~evqa~rg~l~~ie~~g~lmE~~lIldnk 2208 (2399)
T KOG0040|consen 2129 ISRQEENDKLCEEFACTANTFHQWIVETRKELEDGESGTLEDQLEALKRKIKEVQAMRGQLQKIEKLGALMESRLILDNK 2208 (2399)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhccc
Confidence 99999999999999999999999999999998887 99999999999999999999999999999999999999999999
Q ss_pred CCchhHhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCc
Q psy6493 1130 YTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPM 1209 (1321)
Q Consensus 1130 ~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~ 1209 (1321)
||++|+.++...|+.+..++++|..++|.+|.+++..|+|++++.+|.-+|.+||.+.+|.++..+|..||+++||++|.
T Consensus 2209 yt~~st~GlaqqwdQl~qL~~rMqhnlEQqIqarn~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpm 2288 (2399)
T KOG0040|consen 2209 YTEHSTVGLAQQWDQLDQLMMRMQHNLEQQIQARNHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPM 2288 (2399)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhhHHHH
Q psy6493 1210 VEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKEMADYC 1289 (1321)
Q Consensus 1210 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~~~~ 1289 (1321)
++++.+++.+..++..+|++.+|+|+..+|+.||....+.+..+.+.|..+|+.+|. |.+||+..++...|+++++++|
T Consensus 2289 vEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~ltreqaefc 2367 (2399)
T KOG0040|consen 2289 VEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQNLTREQAEFC 2367 (2399)
T ss_pred cccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhcCCHHHHHHH
Confidence 988889999999999999999999999999999999888888888999999999997 9999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCCCCcchHHHHHhhhcC
Q psy6493 1290 VERMKPYVDPKTERGIPGALDYIEFTRTLFQN 1321 (1321)
Q Consensus 1290 ~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~~ 1321 (1321)
+..|..++++.+|.+..+.++|.+|++.+|.|
T Consensus 2368 ~s~m~~~~e~~~~~s~q~~l~y~dfv~sl~~~ 2399 (2399)
T KOG0040|consen 2368 MSKMKPYAETSSGRSDQVALDYKDFVNSLFVN 2399 (2399)
T ss_pred HHHhhhhcccccCCCccccccHHHHHHHHhcC
Confidence 99999999985466667899999999999865
No 2
>KOG0517|consensus
Probab=100.00 E-value=1.8e-109 Score=964.87 Aligned_cols=1096 Identities=32% Similarity=0.523 Sum_probs=1057.4
Q ss_pred CCCCCHHHHHHHHHhhHhHHHHHhhhHHHHHHHHHHHHHHHhcCCchHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy6493 7 DVGEDLEQVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQLMSLGQTEAALKIQTQLQDLNQKWTSLQQLTAERATQLGSA 86 (1321)
Q Consensus 7 ~~~~d~~~~~~~~~~~~~l~~el~~~~~~v~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~ 86 (1321)
.+|.++++|+..+.+|+.|..++.+...+|..|+..+++|+..+||... .|..+.+.||.+|..|.....+|...|+.+
T Consensus 871 ~~~~~~E~vev~q~rFe~l~~eM~~~~~~v~~Vn~~a~qL~~~ghp~sd-~I~~~Q~~Ln~rW~~l~~l~~qk~~~L~~a 949 (2473)
T KOG0517|consen 871 SPPDSLEDVEVMQHRFEKLEQEMNTLAGRVAEVNDIARQLLEVGHPNSD-EILARQDKLNQRWQQLRELVDQKKVALESA 949 (2473)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhcCC-CCCCCChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCCCcHHHHH
Q psy6493 87 HEVQRFHRDVDETKDWIQEKDEALNN-NDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRLMQTHPETAEQTY 165 (1321)
Q Consensus 87 l~~~~f~~~~~~~~~wl~~~e~~l~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~l~ 165 (1321)
+.++.|..+|.+...||.++...+.+ ..+|.|+..|-.+++++..+++++.+++++|..|...|..+....|..+..|.
T Consensus 950 ~~V~~f~~eC~et~~wi~dK~~~~e~t~~~~~Dl~gv~alqrrL~~lErdl~aie~kv~~L~~ea~~v~~~~Paea~~i~ 1029 (2473)
T KOG0517|consen 950 LRVETFHLECEETRVWIRDKTRVLESTDRLGNDLAGVMALQRRLQGLERDLAAIEAKVAALEKEANKVEEEHPAEAQAIN 1029 (2473)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhccccCcchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcChHHHHHHH
Confidence 99999999999999999999888876 56789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHHHHHHHHHHhhc
Q psy6493 166 AKQKEINEEWTQLTAKANTRKEKLLDSYDLQRFLSDYRDLMSWINSMMGLVSSDELANDVTGAEALLERHQEHRTEIDAR 245 (1321)
Q Consensus 166 ~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~el~~~ 245 (1321)
.++..|...|..|...+.+|...+.++..++.|.++++.|..||..+...+.+.+.|.|+++++.+|.+|.++..+|+.+
T Consensus 1030 ~r~~el~~~w~~l~~~~~~~~~~l~ea~~lQ~Fl~dld~f~~Wl~~tq~~~~see~p~~l~eAe~LL~qH~~l~eEI~~~ 1109 (2473)
T KOG0517|consen 1030 ARIAELQALWEQLQQRLQEREERLEEAGGLQRFLRDLDDFQAWLESTQTQVASEEGPVDLAEAEQLLKQHAALREEIDGY 1109 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHhc-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhcc
Q psy6493 246 TGTFQAFDLFGQQLLQS-GHYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLELQLFYRDCEQAENWMSAREAFLNA 324 (1321)
Q Consensus 246 ~~~~~~l~~~g~~l~~~-~~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~~ 324 (1321)
...+..+...|..+... ..|....+..+|..|...|..|..+|..|...|.+++.++.|..+.+.+...+.+.|..|..
T Consensus 1110 ~e~y~~~~~~ge~~~~g~~~p~~~~l~erL~~L~~gw~eL~~mWe~Rq~~L~Q~l~lQ~F~Rda~q~ea~l~~qE~~L~~ 1189 (2473)
T KOG0517|consen 1110 QEDYQRMRALGETVADGQTDPQYLFLRERLQALGTGWEELHRMWENRQKWLSQGLDLQLFLRDARQAEATLSNQEAFLSH 1189 (2473)
T ss_pred HHHHHHHHHHhhhhhccCCCchHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 99999999999988764 34566779999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy6493 325 EEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGES 404 (1321)
Q Consensus 325 ~~~~~~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~ 404 (1321)
.++|.++++++..+++|.+|...|....+++..+...|++|+..+++++..|..++..|..||..+..++.+|..+|.++
T Consensus 1190 d~lp~sle~ae~~LKrh~DF~~tm~a~~~ki~a~~~~gd~Lv~~~h~~s~~I~ek~~~I~~r~~~nr~rA~q~~~~L~~s 1269 (2473)
T KOG0517|consen 1190 DNLPDSLEEAEALLKRHRDFLTTMDANDEKIEALVDTGDKLVSEGHIDSDKIREKAQSILARRKANRERAQQRLRKLKDS 1269 (2473)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhcccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCCCCHHHHH
Q psy6493 405 QTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQ 484 (1321)
Q Consensus 405 ~~~~~f~~~~~~l~~Wl~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~i~ 484 (1321)
+.+++|.++++++..||.+++.++.++++.++.++..++.+|++|+.||.++++.++.+...|..|+...|+ ..+.|.
T Consensus 1270 lelQ~flqd~~EL~~Wi~EK~l~a~Desy~~~~nl~~k~~kHqAFeaELaank~~l~~i~~eG~~L~~ekpe--~~~~V~ 1347 (2473)
T KOG0517|consen 1270 LELQEFLQDCDELKLWIEEKMLMAQDESYRDARNLHSKWLKHQAFEAELAANKEWLEKIEKEGQELVSEKPE--LKALVE 1347 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhcCCc--cchhHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998865 578899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy6493 485 ARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAH 564 (1321)
Q Consensus 485 ~~l~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei~~~ 564 (1321)
.+|..|+.+|+.|.....++..+|.++-+...|...+.++..||.+++..|.+.++|.|+.++..++++++.++.++..+
T Consensus 1348 ~kl~~L~~~W~~Le~~t~~Kg~~L~qA~~q~~~~qs~~D~~~~l~~le~qL~S~D~G~DL~Svn~llkKqq~lEsem~~~ 1427 (2473)
T KOG0517|consen 1348 KKLRELHKQWDELEKTTQEKGRKLFQANRQELLLQSLADAKKKLDELESQLQSDDTGKDLTSVNDLLKKQQVLESEMEVR 1427 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhhcCC
Q psy6493 565 DDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSD 644 (1321)
Q Consensus 565 ~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~ 644 (1321)
...|..|...+..|...++ +++.|......+.+||..|+..+.+|+..|+.+..+|+|..++++...|+.+..+..++.
T Consensus 1428 ~~kv~el~s~~~~ma~~~~-~a~~I~~~~~~v~~Rf~~L~~Pl~~R~~~Le~S~e~hQf~~dvddE~~WV~ErlP~A~s~ 1506 (2473)
T KOG0517|consen 1428 AQKVAELQSQAKAMAEEGH-SAENIEETTLAVLERFEDLLGPLQERRKQLEASKELHQFVRDVDDELLWVAERLPLASST 1506 (2473)
T ss_pred HHHHHHHHHhhHhhhccCc-chhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhCccCCch
Confidence 9999999999999988887 888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 645 DYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESL 724 (1321)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~ 724 (1321)
++|.++..++.+.+|++.|+.||..|+|.++.+...|..|+..++++++.|...+.+|.+.|..|...|..|...|..+.
T Consensus 1507 d~G~~L~~~q~l~KK~q~Lq~EI~~H~prI~~vl~~gq~Li~~~h~~a~~i~~~~~eLe~aW~eL~~a~e~R~~~L~~a~ 1586 (2473)
T KOG0517|consen 1507 DYGENLQTVQSLHKKNQTLQAEIKGHQPRINDVLERGQSLIDSGHPEAEAIEEKLQELESAWQELKEACELRRQRLDEAV 1586 (2473)
T ss_pred hhccChHHHHHHHHHhHHHHHHHHhcchHHHHHHHHhHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhhcCCCchHHHHH
Q psy6493 725 TYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQR 804 (1321)
Q Consensus 725 ~~~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~ 804 (1321)
..++|+-++.+++.||.+.+..+.+.++|.|..++..++++|+.++.++..+...|..+-..|..|+..++|+++.|..+
T Consensus 1587 kaQQY~fDaaE~EaWm~Eqel~m~see~gkDE~sa~~llkKH~~Le~~v~~Y~~~i~qL~~~~~~lv~~~hP~~eri~~r 1666 (2473)
T KOG0517|consen 1587 KAQQYYFDAAEAEAWMGEQELYMMSEEYGKDEDSALKLLKKHQALEQEVEDYAQTIEQLAQKAQALVEANHPESERISRR 1666 (2473)
T ss_pred HHHHHHhhHHHHHHHHhhhHHHHhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcccccCCCHHHHHHHHHhHHHHHHhhhhhhh
Q psy6493 805 CQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEH 884 (1321)
Q Consensus 805 ~~~l~~~~~~l~~~~~~r~~~Le~~~~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 884 (1321)
.+.|.+.|..|...+.+|+.+|++++.+++|.+++++|..||.+.+..+.|++.|.|++++..+.++|..|..++...+.
T Consensus 1667 Q~qldkly~~Lk~LA~eRr~~Lee~l~L~el~RE~dDLeqWIae~e~vAgS~elGqD~EHv~~Lq~KF~eFa~~te~iG~ 1746 (2473)
T KOG0517|consen 1667 QSQLDKLYAGLKDLAEERRRRLEETLRLYELSREVDDLEQWIAEKEVVAGSEELGQDFEHVTLLQEKFREFARDTEAIGS 1746 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCChHHHHHHHHHHHHHHHHHhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred hhHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHhhHHhh
Q psy6493 885 EGIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNSWFENA 964 (1321)
Q Consensus 885 ~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f~~~~~~~~~wl~~~ 964 (1321)
++|++++.+++.|+..||+.+++|..+-+.|+..|.+|++++..|.+.|..+.. ++.|+..+.++..|+.+.
T Consensus 1747 eRv~~~n~la~~LI~~ghs~a~tvaewkd~LneaW~~LlELi~tR~q~Laas~e--------lhrf~~D~~E~l~riqeK 1818 (2473)
T KOG0517|consen 1747 ERVAACNLLADELIERGHSAAATVAEWKDGLNEAWADLLELIDTRGQKLAASRE--------LHRFHRDAREVLGRIQEK 1818 (2473)
T ss_pred HHHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977654 468999999999999999
Q ss_pred hhhcCCCcCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcc-hhhcHHHHHHHHHHHHHHHHHH
Q psy6493 965 EEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPY-TWFTMEALEDTWRNLQKIIKER 1043 (1321)
Q Consensus 965 e~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~-~~~~~~~l~~~w~~l~~~~~~r 1043 (1321)
...+.... +.++..+.++.+.|.+|.++|....++|..|.+.+..|...|+|++.. +....+.|...|..|+..++.|
T Consensus 1819 ~~~lp~~l-gRD~~s~~al~R~H~~fe~dl~~l~~Qvqql~e~a~rLq~~YaG~kA~aI~~reqeV~qaW~~L~~~~~~R 1897 (2473)
T KOG0517|consen 1819 QAALPDDL-GRDLNSAEALQRKHEAFEHDLVALEPQVQQLQEDAARLQKAYAGDKAEAIQQREQEVLQAWAELQGACEAR 1897 (2473)
T ss_pred HhhCchhh-CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887654 678899999999999999999999999999999999999999999755 4578899999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----cccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhH
Q psy6493 1044 DIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEG-----TGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGA 1118 (1321)
Q Consensus 1044 ~~~L~~~~~~~~~~~~~~~~f~~~~~~l~~wl~~~~~~~~~~-----~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~ 1118 (1321)
...|..+- ....|.+.+.+++.||..+...+... ..+.+-.++.|+.+..||+.+.+++..+..+|+
T Consensus 1898 r~~L~~t~--------Dl~rF~~~VRDllsWmd~v~~qiqa~e~prDvss~ellm~~Hq~lkaEieARe~~f~~c~eLG~ 1969 (2473)
T KOG0517|consen 1898 RDRLADTS--------DLFRFFSMVRDLLSWMDEVIRQIQAQERPRDVSSVELLMNNHQGLKAEIEAREDNFSACIELGK 1969 (2473)
T ss_pred HHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHhHHHHHHHHhccHHHHHHHHHHH
Confidence 99999876 34489999999999999998777632 667788899999999999999999999999999
Q ss_pred HHHHh
Q psy6493 1119 ILEEH 1123 (1321)
Q Consensus 1119 ~l~~~ 1123 (1321)
.|..+
T Consensus 1970 ~lL~~ 1974 (2473)
T KOG0517|consen 1970 SLLLR 1974 (2473)
T ss_pred HHHHh
Confidence 98775
No 3
>KOG0517|consensus
Probab=100.00 E-value=3e-90 Score=804.46 Aligned_cols=1134 Identities=21% Similarity=0.367 Sum_probs=1059.3
Q ss_pred cccccCCCCCHHHHHHHHHhhHhHHHHHhhhHHHHHHHHHHHHHHHhcCCchHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 2 HAQVQDVGEDLEQVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQLMSLGQTEAALKIQTQLQDLNQKWTSLQQLTAERAT 81 (1321)
Q Consensus 2 ~~~~~~~~~d~~~~~~~~~~~~~l~~el~~~~~~v~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~ 81 (1321)
+|++.+.|.|+..|++..++|++|..+|-++..+|..|...++.|......+.+ .|..+-+++-.+|..|...+..|+.
T Consensus 437 lvsqdnfg~~LaaVEAa~KKheAIetDI~AyeeRvqal~ava~eL~~E~YHd~~-rV~~r~~~V~~~W~~Ll~lL~arR~ 515 (2473)
T KOG0517|consen 437 LVSQDNFGYDLAAVEAALKKHEAIETDILAYEERVQALVAVADELEAENYHDIK-RVAARKDNVLRLWTYLLELLEARRQ 515 (2473)
T ss_pred HHhccccCccHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccchHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999998877777 8999999999999999999999999
Q ss_pred HHHhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH---hCC
Q psy6493 82 QLGSAHEVQRFHRDVDETKDWIQEKDEALNNNDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRLMQ---THP 158 (1321)
Q Consensus 82 ~L~~~l~~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~~---~~~ 158 (1321)
+|+..+.++....++..+.+||.+....+.+.+.|..+-+|+.++++|.-++.+|..+...|..++..+..+.. ..|
T Consensus 516 rL~~~~~Lqklfqem~~~~d~meElk~~l~S~d~GkHL~gVedLLQkH~LlEadIn~~gerv~~~~a~a~~f~~~~~~~~ 595 (2473)
T KOG0517|consen 516 RLEQMLALQKLFQEMLYTSDWMEELKQQLLSRDVGKHLLGVEDLLQKHDLLEADINAQGERVKALNAQALRFDSPKEYKP 595 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHhhhhHHhHHHHHHHHHHHHHHHHhhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986 456
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHHHHHH
Q psy6493 159 ETAEQTYAKQKEINEEWTQLTAKANTRKEKLLDSYDLQRFLSDYRDLMSWINSMMGLVSSDELANDVTGAEALLERHQEH 238 (1321)
Q Consensus 159 ~~~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~l 238 (1321)
+++..|..++..|..+|..|+.++..|+.+|+.+..+..|..++.+...||.+.+..+.+.+.+.|+.++-..+.+|+++
T Consensus 596 cdp~vi~~R~~~le~~y~eL~~laa~RRarLE~sr~l~~F~~d~~EeEaWlkEkeqi~~sa~~g~DLs~v~~ll~kHKal 675 (2473)
T KOG0517|consen 596 CDPQVIQERVAHLEQCYQELVELAAARRARLEESRRLWQFLWDVEEEEAWLKEKEQILSSADTGRDLSSVLRLLQKHKAL 675 (2473)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy6493 239 RTEIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLELQLFYRDCEQAENWMSAR 318 (1321)
Q Consensus 239 ~~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~ 318 (1321)
..+|..+.+.+..+...|..|+..++|..+.|..++..+..+|..|...+..|...|+.+..+.+|+.+.+++..||...
T Consensus 676 E~E~~~~~a~~~~~~~~G~~Lvae~~pg~~~i~~R~~~i~~~W~~L~~l~~~r~~rL~~A~~~~QffaDAdd~~sWl~d~ 755 (2473)
T KOG0517|consen 676 EDEMRGRDAHLKQMIREGEELVAEGHPGSDQIQERAAEIREQWQRLEALVAGRGRRLQEARELYQFFADADDAESWLRDA 755 (2473)
T ss_pred HHHHhcchhHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHH---HHHHHHHHHHHHHHHHH
Q psy6493 319 EAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDD---KRKQVLDRWRLLKEALI 395 (1321)
Q Consensus 319 e~~l~~~~~~~~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~---~~~~l~~r~~~l~~~~~ 395 (1321)
-..+++.++|.|..+++.++++|.++..++.++.+.|..|.+++..|....+ ..+.|.. ++..+...|..|...+.
T Consensus 756 ~rlvss~d~G~DE~saq~LlkrH~~l~~El~a~~~~i~~L~eQa~~l~~~~~-e~p~V~~~~~R~~~i~q~Y~El~~lA~ 834 (2473)
T KOG0517|consen 756 LRLVSSEDVGHDEASAQALLKRHRDLEEELRAYRGDIDRLEEQASALPQESP-EGPEVRQPLQRQDTISQDYEELQELAQ 834 (2473)
T ss_pred HHhccchhcCCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhccccC-CCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987533 4445555 99999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHhhhhcc-cCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhcc
Q psy6493 396 EKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEES-YKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKR 474 (1321)
Q Consensus 396 ~r~~~L~~~~~~~~f~~~~~~l~~Wl~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~ 474 (1321)
-|+..|+++..+..|+..++++..||.+++..+.... +.+++.+.---.++..|..++......+..|+..+..|+..+
T Consensus 835 lRrq~L~dalaLy~~~se~d~~ElWi~Eke~~L~~m~~~~~~E~vev~q~rFe~l~~eM~~~~~~v~~Vn~~a~qL~~~g 914 (2473)
T KOG0517|consen 835 LRRQRLEDALALYGFYSECDACELWIKEKEKWLATMSPPDSLEDVEVMQHRFEKLEQEMNTLAGRVAEVNDIARQLLEVG 914 (2473)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCCCCChhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999888633 446677777777788899999999999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcC-CCCCCCHHHHHHHHHH
Q psy6493 475 QCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTS-EDSGKDLASVQNLIKK 553 (1321)
Q Consensus 475 ~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~WL~~~e~~L~~-~~~~~d~~~~~~~l~~ 553 (1321)
|| .+..|...-+.|+.+|..|......|...|..++....|...+.+...||.+.-..+.+ ...+.|+.+|......
T Consensus 915 hp--~sd~I~~~Q~~Ln~rW~~l~~l~~qk~~~L~~a~~V~~f~~eC~et~~wi~dK~~~~e~t~~~~~Dl~gv~alqrr 992 (2473)
T KOG0517|consen 915 HP--NSDEILARQDKLNQRWQQLRELVDQKKVALESALRVETFHLECEETRVWIRDKTRVLESTDRLGNDLAGVMALQRR 992 (2473)
T ss_pred CC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccCcchHHHHHHHHH
Confidence 75 57899999999999999999999999999999999999999999999999999877764 4589999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy6493 554 HQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESW 633 (1321)
Q Consensus 554 ~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~~~~f~~~~~~~~~W 633 (1321)
+..++.++....+.|..|...|..+....|..+..|..++..|..-|..|...+..+...++.+..++.|..+++.|+.|
T Consensus 993 L~~lErdl~aie~kv~~L~~ea~~v~~~~Paea~~i~~r~~el~~~w~~l~~~~~~~~~~l~ea~~lQ~Fl~dld~f~~W 1072 (2473)
T KOG0517|consen 993 LQGLERDLAAIEAKVAALEKEANKVEEEHPAEAQAINARIAELQALWEQLQQRLQEREERLEEAGGLQRFLRDLDDFQAW 1072 (2473)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcCCcCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhc-CCCCchHHHHHHHHHHHHHHHHHHH
Q psy6493 634 IKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDV-SNLGVPEIEQRLKLLNQAWSELKQL 712 (1321)
Q Consensus 634 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~-~~~~~~~i~~~l~~l~~~w~~l~~~ 712 (1321)
|..+...+.+.+.|.|++.++.++++|..+..+|..++..|..+...|+.+..+ ..|..-.+.+++..|...|..|...
T Consensus 1073 l~~tq~~~~see~p~~l~eAe~LL~qH~~l~eEI~~~~e~y~~~~~~ge~~~~g~~~p~~~~l~erL~~L~~gw~eL~~m 1152 (2473)
T KOG0517|consen 1073 LESTQTQVASEEGPVDLAEAEQLLKQHAALREEIDGYQEDYQRMRALGETVADGQTDPQYLFLRERLQALGTGWEELHRM 1152 (2473)
T ss_pred HHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCchHhHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988764 2334456899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhh
Q psy6493 713 AANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIE 792 (1321)
Q Consensus 713 ~~~r~~~L~~~~~~~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~ 792 (1321)
+..|...|.+++.++.|..+.+.+..-+...+..|....+|.++++++.+|++|.+|...+....+.+..+...|+.|+.
T Consensus 1153 We~Rq~~L~Q~l~lQ~F~Rda~q~ea~l~~qE~~L~~d~lp~sle~ae~~LKrh~DF~~tm~a~~~ki~a~~~~gd~Lv~ 1232 (2473)
T KOG0517|consen 1153 WENRQKWLSQGLDLQLFLRDARQAEATLSNQEAFLSHDNLPDSLEEAEALLKRHRDFLTTMDANDEKIEALVDTGDKLVS 1232 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcccccccHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcccccCCCHHHHHHHHHhH
Q psy6493 793 AKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQ 872 (1321)
Q Consensus 793 ~~~~~~~~i~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~ 872 (1321)
.+++++..|.++...+..+|..+...+.+|..+|...+.++.|.++|++|..||.++.-... .+...+...+...+.+|
T Consensus 1233 ~~h~~s~~I~ek~~~I~~r~~~nr~rA~q~~~~L~~slelQ~flqd~~EL~~Wi~EK~l~a~-Desy~~~~nl~~k~~kH 1311 (2473)
T KOG0517|consen 1233 EGHIDSDKIREKAQSILARRKANRERAQQRLRKLKDSLELQEFLQDCDELKLWIEEKMLMAQ-DESYRDARNLHSKWLKH 1311 (2473)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-ccchhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999966554 34457889999999999
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy6493 873 ETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAK 952 (1321)
Q Consensus 873 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f~~ 952 (1321)
++|..+|.+ .+++++.+...|..|+...|...+.|..++.+|+.+|++|...+.++..+|.+|... ..|..
T Consensus 1312 qAFeaELaa-nk~~l~~i~~eG~~L~~ekpe~~~~V~~kl~~L~~~W~~Le~~t~~Kg~~L~qA~~q--------~~~~q 1382 (2473)
T KOG0517|consen 1312 QAFEAELAA-NKEWLEKIEKEGQELVSEKPELKALVEKKLRELHKQWDELEKTTQEKGRKLFQANRQ--------ELLLQ 1382 (2473)
T ss_pred HHHHHHHHh-ChHHHHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH--------HHHHH
Confidence 999999999 589999999999999999999999999999999999999999999999999998763 47899
Q ss_pred HhhHHHhhHHhhhhhcCCCcCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcchhhcHHHHHHH
Q psy6493 953 KASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDT 1032 (1321)
Q Consensus 953 ~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~l~~~ 1032 (1321)
.+.++..||...+..|.+.++|.++.++..++.++..+..++.-....|..|...+..+...++ +...+......+..|
T Consensus 1383 s~~D~~~~l~~le~qL~S~D~G~DL~Svn~llkKqq~lEsem~~~~~kv~el~s~~~~ma~~~~-~a~~I~~~~~~v~~R 1461 (2473)
T KOG0517|consen 1383 SLADAKKKLDELESQLQSDDTGKDLTSVNDLLKKQQVLESEMEVRAQKVAELQSQAKAMAEEGH-SAENIEETTLAVLER 1461 (2473)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhccCc-chhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988765 555677788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH-----hhhcccccHHHHHHHHHHHHHHHHhhh
Q psy6493 1033 WRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRT-----SMMEGTGSLEQQLEAIKRKAAEVRSRR 1107 (1321)
Q Consensus 1033 w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~~f~~~~~~l~~wl~~~~~-----~~~~~~~~l~~ql~~~~~l~~ei~~~~ 1107 (1321)
+..|+.-+..|...|+... .+.+|...++.-..|+.+-.- .+..+..+.+.-+.+.+.|..||..++
T Consensus 1462 f~~L~~Pl~~R~~~Le~S~--------e~hQf~~dvddE~~WV~ErlP~A~s~d~G~~L~~~q~l~KK~q~Lq~EI~~H~ 1533 (2473)
T KOG0517|consen 1462 FEDLLGPLQERRKQLEASK--------ELHQFVRDVDDELLWVAERLPLASSTDYGENLQTVQSLHKKNQTLQAEIKGHQ 1533 (2473)
T ss_pred HHHHHhHHHHHHHHHHHHH--------HHHHHHHhhhHHHHHHHhhCccCCchhhccChHHHHHHHHHhHHHHHHHHhcc
Confidence 9999999999999999876 344788888888999998742 222235556677889999999999999
Q ss_pred hhHHHHHHhhHHHHHhhcccccCCchhHhHHHHHHHHHHHHHHHHHHhHHH
Q psy6493 1108 SDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQ 1158 (1321)
Q Consensus 1108 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 1158 (1321)
+.++.+-.-|+.++..+..+.......+..|.+.|..|...+..+...++.
T Consensus 1534 prI~~vl~~gq~Li~~~h~~a~~i~~~~~eLe~aW~eL~~a~e~R~~~L~~ 1584 (2473)
T KOG0517|consen 1534 PRINDVLERGQSLIDSGHPEAEAIEEKLQELESAWQELKEACELRRQRLDE 1584 (2473)
T ss_pred hHHHHHHHHhHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888666665655667889999999999998887776653
No 4
>KOG0040|consensus
Probab=100.00 E-value=4.5e-83 Score=728.43 Aligned_cols=1121 Identities=39% Similarity=0.630 Sum_probs=1036.8
Q ss_pred cccccCCCCCHHHHHHHHHhhHhHHHHHhhhHHHHHHHHHHHHHHHhcCCchHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 2 HAQVQDVGEDLEQVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQLMSLGQTEAALKIQTQLQDLNQKWTSLQQLTAERAT 81 (1321)
Q Consensus 2 ~~~~~~~~~d~~~~~~~~~~~~~l~~el~~~~~~v~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~ 81 (1321)
+|.++++|.|++.++.++++++.|..++.+++.+|+.+++.|++|+..+||+.+ .|..+-+.+|..|.+|...+-.|+.
T Consensus 171 ~~t~~e~g~d~e~~evl~~kf~~f~~~~~~~e~rv~evnq~a~~~~~e~h~e~~-~i~~k~~evn~aw~rl~~la~~rq~ 249 (2399)
T KOG0040|consen 171 IVTSEELGQDLEHVEVLQKKFEDFQKELAAHEYRVNEVNQYADKLVEEGHPELD-LIQKKQDEVNAAWQRLKGLALQRQE 249 (2399)
T ss_pred eeeHHHhcccHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHcCCCchH-HHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCCCcH
Q psy6493 82 QLGSAHEVQRFHRDVDETKDWIQEKDEALNNNDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRLMQTHPETA 161 (1321)
Q Consensus 82 ~L~~~l~~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~~~~~~~~ 161 (1321)
.|-.+..+++|.+++++...|+.+++..|++.+.|.|+.++..++++|+.+++++.+....|..|...|.+|..++|+++
T Consensus 250 ~l~~a~~~qrf~rd~~et~~wi~ek~~~l~sddygrdl~~~q~l~~~h~g~erdla~l~~kv~~l~~~a~~l~~~hp~~a 329 (2399)
T KOG0040|consen 250 KLFGAAEVQRFNRDVDETIAWIKEKEPVLSSDDYGRDLASVQALQRKHEGLERDLAALEDKVKELCAEAEKLTLSHPDDA 329 (2399)
T ss_pred hhccHHHHHHhcccHHHHHHHHhhccccccccccchhHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHhcCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHHHHHHHHH
Q psy6493 162 EQTYAKQKEINEEWTQLTAKANTRKEKLLDSYDLQRFLSDYRDLMSWINSMMGLVSSDELANDVTGAEALLERHQEHRTE 241 (1321)
Q Consensus 162 ~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~e 241 (1321)
+.|+.+-..+...|..+...+..|...|+..+-++.|..++..|..|++.+...++..+++.++..++..|+.|++++.+
T Consensus 330 ~qi~~~~~~~~~~w~~~~~~a~~r~~~l~~s~~~hrf~ad~rdL~~w~~~~~aaInadel~~dvag~e~lL~~hqEhK~e 409 (2399)
T KOG0040|consen 330 PQIQEKKEDLVSSWEHIRTLATERKEKLQASYWLHRFLADFRDLSSWINEMKAAINADELAKDVAGAEALLDRHQEHKGE 409 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhHHHHHHHHHHHHHHcCchhhHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhh
Q psy6493 242 IDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLELQLFYRDCEQAENWMSAREAF 321 (1321)
Q Consensus 242 l~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~ 321 (1321)
|+++...++.-...|+.+...++++...|+.++..+...|..|...|.+|....+++.+++.|+.+..+...|+...+++
T Consensus 410 Ids~~dSf~~~~~~gq~l~~~~~~as~ev~ekl~~le~e~~~ll~lwe~r~~~yeqcmd~~lfyrdteq~d~wmskqeaf 489 (2399)
T KOG0040|consen 410 IDAREDSFKSADESGQKLVEAGHYASDEVREKLEILDNEKSALLELWEERRIQYEQCMDLQLFYRDTEQVDTWMSKQEAF 489 (2399)
T ss_pred hHHHHHHHhhhccccHHHHHccccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 322 LNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRL 401 (1321)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L 401 (1321)
|...+.|.+.+++...+++|++|++-+......+..+...+..|+...+++.+.+..+-..+..|-..+......|+..|
T Consensus 490 l~nedlg~sl~S~e~l~kkhedfEks~~aQEeki~~~d~~atkli~~~hy~~~dv~~rr~~ll~rr~~l~e~a~~r~~~l 569 (2399)
T KOG0040|consen 490 LANEDLGDSLDSVEALLKKHEDFEKSLAAQEEKIIALDEFATKLIQGQHYAAEDVAARRDALLARRDALREKAATRRRLL 569 (2399)
T ss_pred HHhhhhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHhHHHHHHHHHHHHHhhhhcccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCCCCHH
Q psy6493 402 GESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEE 481 (1321)
Q Consensus 402 ~~~~~~~~f~~~~~~l~~Wl~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~ 481 (1321)
..+..++.|+++++++..||.++...+.+..+.||++++..+.+|+.|..++......++.+...|..++..++. ..+
T Consensus 570 k~s~~~q~~~rd~de~~~wi~Ek~~~a~dd~y~d~~nlk~kvqk~q~fe~el~An~~r~~~i~~~g~~~i~~~h~--A~d 647 (2399)
T KOG0040|consen 570 KESLLLQQFYRDSDELKSWINEKLKTATDESYKDPTNLKGKVQKHQNFEKELAANKSRLEDIQKTGQELIEGGHY--AAD 647 (2399)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhcccccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH--HHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986 467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy6493 482 AVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADI 561 (1321)
Q Consensus 482 ~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei 561 (1321)
.+--++..+...|..+......+..+|..+-+.++|...++++..||.+++..|.+.++|+++.++....++|-.|..++
T Consensus 648 ~v~~r~~ev~~Lw~~l~~aT~~kg~kl~ea~qq~qf~~n~edve~wl~e~e~ql~sed~gkdl~~vqn~~kk~~lLe~~v 727 (2399)
T KOG0040|consen 648 NVTTRLSEVASLWEELLEATKKKGTKLREANQQQQFNRNIEDIELWLSEVEGQVASEDYGKDLTSVQNLQKKHGLLESDV 727 (2399)
T ss_pred HHhHhHHHHHHHHHHHHhhcccccHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhh
Q psy6493 562 QAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLV 641 (1321)
Q Consensus 562 ~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~~~~f~~~~~~~~~Wl~~~~~~l 641 (1321)
..+...++.+...+..+...+++++..|..+...|..||..+..+...|...|-.++...+...+......|+.+.++..
T Consensus 728 ~a~~d~vd~~~~~a~~fee~~h~da~~i~~kqe~L~~r~eal~dp~a~rk~Kl~d~l~~~~l~rd~edE~awi~E~E~~a 807 (2399)
T KOG0040|consen 728 AAHQDRVDGITDLAAQFQEIGHFDAKNIRAKQENLVARYEALKEPLATRKQKLLDSLQLQQLFRDTEDEEAWIREKEPIA 807 (2399)
T ss_pred HHhhhhHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHhhhhhhhhchHHHHHHHhhcchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 642 GSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLD 721 (1321)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~ 721 (1321)
.+...|.++-.++.++++|+.+..+|..+.+.+..|...|..++..++..++.++.++..|++.|+.+......|...|+
T Consensus 808 ~st~~gkdlI~~qnl~~k~q~~~~~ia~he~ri~~i~~r~~~m~~~~~f~aedvk~~~~~L~~~~~slk~ka~~r~~dle 887 (2399)
T KOG0040|consen 808 ASTNRGKDLIGVQNLLKKHQALLAEIANHEPRIQEVTSRGNKMVEEGHFAAEDVRSRLKSLNQNWESLKAKASQRRQDLE 887 (2399)
T ss_pred cchhcchhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhh--------
Q psy6493 722 ESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEA-------- 793 (1321)
Q Consensus 722 ~~~~~~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~-------- 793 (1321)
..++.++|..++.+...|+.+.++...+.++|.+.+....++.+|+++..+++.+...|..+.+.+..=...
T Consensus 888 ~s~q~~qy~ad~~eae~w~~ekEpi~~stdygKdedsa~allkkhea~~~dl~af~~~i~~lr~qa~~cq~Q~tpv~~~g 967 (2399)
T KOG0040|consen 888 DSLQAQQYLADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALLSDLEAFGDSIQALREQANACRQQEAPVEDVG 967 (2399)
T ss_pred hHHHHHHHHHHHhhHHHHhhccCcccccccccchhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhccCCchhhHH
Confidence 999999999999999999999999999999999999999999999999999999999998877655421100
Q ss_pred -------------cC---------------------------------------------CC------chHHHHHHHHHH
Q psy6493 794 -------------KN---------------------------------------------HH------ADSITQRCQQLQ 809 (1321)
Q Consensus 794 -------------~~---------------------------------------------~~------~~~i~~~~~~l~ 809 (1321)
+| ++ ...|..+-+++.
T Consensus 968 ~~~v~alyd~q~kSprev~mKkgDvltll~s~nkdwwkve~~d~qg~vpa~yvk~~~~~~~~~~~l~~~~~i~~rq~qi~ 1047 (2399)
T KOG0040|consen 968 KECVLALYDYQEKSPREVTMKKGDVLTLLNSINKDWWKVEVNDRQGFVPAAYVKRLDPGSASQPNLRREESIAQRQEQIE 1047 (2399)
T ss_pred HHHHHHHHHHHhcCHHHHHHhhhhHHHHHhhcccccccchhhhhcCcchHHHHHHhccCCcchHHHHHHHHHHhhHHHHH
Confidence 00 00 134666778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcccccCCCHHHHHHHHHhHHHHHHhhhhhhhhhHHH
Q psy6493 810 LKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQN 889 (1321)
Q Consensus 810 ~~~~~l~~~~~~r~~~Le~~~~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 889 (1321)
.+|..+.....+|..+|...+.-.-+.++..++..||.+++.. ..++ +++.|..++.+|.+|..++.. ...++..
T Consensus 1048 ~qyr~lld~~~er~~~l~k~~ke~~l~~ea~dl~~wi~ekE~~--~~~v--dle~V~~lqkKfddf~~dlka-ne~rLre 1122 (2399)
T KOG0040|consen 1048 NQYRSLLDLAEERKRKLEERCKEFLLAREANDLAEWIQEKEAE--NTEV--DLEQVEVLQKKFDDFQKDLKA-NEVRLRD 1122 (2399)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH--hccc--cHHHHHHHHHHHHHhhhhhcc-ChHHHHH
Confidence 9999999999999999999887777778899999999999933 3344 999999999999999999999 5799999
Q ss_pred HHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHhhHHhhhhhc
Q psy6493 890 ITTLKDQLVASNHDQT-PAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNSWFENAEEDL 968 (1321)
Q Consensus 890 ~~~~~~~l~~~~~~~~-~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f~~~~~~~~~wl~~~e~~l 968 (1321)
++.++..|...|.... ..|+.. ++.+|..|..+..++.+.|..+-. ++.|+...+....|+.+....|
T Consensus 1123 ~n~vAd~l~~~g~t~~~~~irqq---ln~rw~~Lqr~~~E~~q~lgsahe--------vq~fhrd~detk~~i~ek~~al 1191 (2399)
T KOG0040|consen 1123 INKVADDLTSEGQTEEAAQIRQQ---LNARWRSLQRLAEERRQLLGSAHE--------VQRFHRDADETKEWIEEKCQAL 1191 (2399)
T ss_pred HHHHHHhccccccCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhHHH--------HHHHHHhhHHHHHHHHHHHHhh
Confidence 9999999987773322 234443 999999999999999998877654 4689999999999999999999
Q ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcchhhcHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 969 TDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELA 1048 (1321)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~ 1048 (1321)
.+..++.++..++.+.++|+.|.+++.++...+-.|.+.+..|....|.....+..+-.+++..|..|......|+.+|.
T Consensus 1192 ~~~d~g~dl~svQalqrkheg~erdla~L~Dkvt~l~e~a~rLtqshp~~aeq~q~qk~elne~w~dl~s~~~~Rkekl~ 1271 (2399)
T KOG0040|consen 1192 NADDPGSDLRSVQALQRKHEGFERDLAALGDKVTSLGETAERLSQSHPDAAEDLQRKQMELNEAWEDLQGRAKDRKEKLL 1271 (2399)
T ss_pred ccccccchHHHHHHHHHHhccchhchHHHhhHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99888999999999999999999999999999999999999999987766666667778899999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhh-----cccccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHHh
Q psy6493 1049 KEATRQDENDALRKEFAKHANAFHQWLTETRTSMM-----EGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEH 1123 (1321)
Q Consensus 1049 ~~~~~~~~~~~~~~~f~~~~~~l~~wl~~~~~~~~-----~~~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~~ 1123 (1321)
..+. .+.|...+.+++.|+..+....+ ......+.-++.+++...++..+...+..+...|..+...
T Consensus 1272 ds~d--------~~rfLs~~rdl~~wi~sm~~lvss~ela~d~tg~eAllerhqe~rte~daRa~tfqA~eqf~~~ll~~ 1343 (2399)
T KOG0040|consen 1272 DSYD--------LQRFLSDYRDLMNWINSIGGLVSSQELANDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGNELLDS 1343 (2399)
T ss_pred hHHH--------HHHHHHHHHHHHHHHHHhcchhhhHHHhhhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 8773 34788999999999999963333 3355566778899999999999999999999999988775
Q ss_pred hcccccCCchhHhHHHHHHHHHHHHH
Q psy6493 1124 LILDNRYTEHSTVGLAQQWDQLDQLG 1149 (1321)
Q Consensus 1124 ~~~~~~~~~~~~~~l~~~~~~l~~~~ 1149 (1321)
+....|-.......+......+...+
T Consensus 1344 ~h~As~eie~kl~~~~l~r~~le~aw 1369 (2399)
T KOG0040|consen 1344 GHYASPEIEKKLQAVKLERDDLEKAW 1369 (2399)
T ss_pred cCcCCHHHHHHHHHHHhhccchHHHH
Confidence 44444433333333333333333333
No 5
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.83 E-value=4.5e-20 Score=170.77 Aligned_cols=146 Identities=24% Similarity=0.435 Sum_probs=129.5
Q ss_pred HhhhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHH
Q psy6493 1162 ARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMA 1241 (1321)
Q Consensus 1162 ~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~ 1241 (1321)
....++++.+++.+|+++|..||+|++|.|++.+|..+++.+|+++ +...+..++..+|. |.|.|+|.+|+.
T Consensus 8 ~~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~-------s~~ei~~l~~~~d~-~~~~idf~~Fl~ 79 (160)
T COG5126 8 LLTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNP-------SEAEINKLFEEIDA-GNETVDFPEFLT 79 (160)
T ss_pred hhhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCC-------cHHHHHHHHHhccC-CCCccCHHHHHH
Confidence 4567889999999999999999999999999999999999999999 89999999999999 899999999999
Q ss_pred HHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhh---HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhh
Q psy6493 1242 FMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKEM---ADYCVERMKPYVDPKTERGIPGALDYIEFTRTL 1318 (1321)
Q Consensus 1242 ~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~---~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~ 1318 (1321)
+|.... ....+.++++.+|+.||+|++|+|+..+|+..++..+ -++.++.|++.+|++ +| |.|+|++|+..+
T Consensus 80 ~ms~~~-~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d-~d---G~i~~~eF~~~~ 154 (160)
T COG5126 80 VMSVKL-KRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDED-GD---GEIDYEEFKKLI 154 (160)
T ss_pred HHHHHh-ccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCC-CC---ceEeHHHHHHHH
Confidence 997653 4677889999999999999999999999999776433 234455666689999 88 999999999987
Q ss_pred hc
Q psy6493 1319 FQ 1320 (1321)
Q Consensus 1319 ~~ 1320 (1321)
..
T Consensus 155 ~~ 156 (160)
T COG5126 155 KD 156 (160)
T ss_pred hc
Confidence 64
No 6
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here
Probab=99.76 E-value=2.8e-16 Score=166.78 Aligned_cols=210 Identities=38% Similarity=0.674 Sum_probs=194.8
Q ss_pred HHHHHHhHHHHHHHHHHhhhhhcCCcCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHHHHHH
Q psy6493 620 LHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRL 699 (1321)
Q Consensus 620 ~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l 699 (1321)
+..|..++..+..||.+++..+.+..++.++..++.++++|+.|..++..+.+.+..+...|..|+..+++....|...+
T Consensus 2 ~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~~~~e~~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~ 81 (213)
T cd00176 2 LQQFLRDADELEAWLSEKEELLSSTDYGDDLESVEALLKKHEALEAELAAHEERVEALNELGEQLIEEGHPDAEEIQERL 81 (213)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 46799999999999999999998877777999999999999999999999999999999999999998888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHH
Q psy6493 700 KLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDR 779 (1321)
Q Consensus 700 ~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 779 (1321)
+.|+.+|+.|...+..|...|+.++...+|+..+.++..||...+..+...+++.+++.++.++..|+.|..++..+++.
T Consensus 82 ~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 161 (213)
T cd00176 82 EELNQRWEELRELAEERRQRLEEALDLQQFFRDADDLEQWLEEKEAALASEDLGKDLESVEELLKKHKELEEELEAHEPR 161 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHhchHH
Confidence 99999999999999999999999997666666676799999999999987665568999999999999999999999999
Q ss_pred HHHHHHhhhHhhhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 780 CADICSAGNKLIEAKNHHA-DSITQRCQQLQLKLDNLMALATKRKTKLMDN 829 (1321)
Q Consensus 780 v~~l~~~~~~L~~~~~~~~-~~i~~~~~~l~~~~~~l~~~~~~r~~~Le~~ 829 (1321)
+..+...|..|....++.. ..+...+..+..+|..|...+..|...|+.+
T Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~L~~~ 212 (213)
T cd00176 162 LKSLNELAEELLEEGHPDADEEIEEKLEELNERWEELLELAEERQKKLEEA 212 (213)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999966655 8999999999999999999999999999764
No 7
>KOG0027|consensus
Probab=99.75 E-value=5e-18 Score=164.91 Aligned_cols=142 Identities=27% Similarity=0.464 Sum_probs=122.9
Q ss_pred CCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhh
Q psy6493 1168 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKE 1247 (1321)
Q Consensus 1168 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 1247 (1321)
++..++.+++.+|..||.+++|+|+..+|..+++.+|..| +..++..++..+|.+++|.|+|.+|+.++....
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~-------t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~ 74 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNP-------TEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLG 74 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCC-------CHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhh
Confidence 4577889999999999999999999999999999999998 899999999999999999999999999997654
Q ss_pred hcccC---CHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhh---HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1248 TENVQ---SSEEIENAFHAIAASDRPYVTKEELYANLTKEM---ADYCVERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1248 ~~~~~---~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~---~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
..... ..+.++.+|+.||+||+|+||..||+..|+..+ -...+..|++.+|.| +| |.|+|.+|+.+|.+
T Consensus 75 ~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d-~d---g~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 75 EEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVD-GD---GKVNFEEFVKMMSG 149 (151)
T ss_pred cccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCC-CC---CeEeHHHHHHHHhc
Confidence 32221 356999999999999999999999999775432 134445667789999 98 99999999999975
No 8
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here
Probab=99.75 E-value=5.7e-16 Score=164.43 Aligned_cols=210 Identities=42% Similarity=0.745 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q psy6493 514 QRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKR 593 (1321)
Q Consensus 514 ~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~ 593 (1321)
+..|...+..+..||..++..|....++.|+..++.++++|+.|..++..+.+.++.+...|+.|+..++.+...|...+
T Consensus 2 ~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~~~~e~~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~ 81 (213)
T cd00176 2 LQQFLRDADELEAWLSEKEELLSSTDYGDDLESVEALLKKHEALEAELAAHEERVEALNELGEQLIEEGHPDAEEIQERL 81 (213)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 46899999999999999999998877666999999999999999999999999999999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhhcCCcCCCCHHHHHHHHHHhHHHHHHHHhchHH
Q psy6493 594 QSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPA 673 (1321)
Q Consensus 594 ~~l~~~~~~l~~~~~~r~~~Le~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~ 673 (1321)
..|+.+|+.|+..+..|...|+.+....+|+..+..+..||...+..+...+++.++..++.++..|+.|..++..+.+.
T Consensus 82 ~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 161 (213)
T cd00176 82 EELNQRWEELRELAEERRQRLEEALDLQQFFRDADDLEQWLEEKEAALASEDLGKDLESVEELLKKHKELEEELEAHEPR 161 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHhchHH
Confidence 99999999999999999999999999777777777799999999999887666668999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 674 IQNVQETGEKLMDVSNLGV-PEIEQRLKLLNQAWSELKQLAANRGQKLDES 723 (1321)
Q Consensus 674 ~~~~~~~~~~L~~~~~~~~-~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~ 723 (1321)
+..+...|..|+..+++.. ..+...+..+..+|..|...+..+...|+.+
T Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~L~~~ 212 (213)
T cd00176 162 LKSLNELAEELLEEGHPDADEEIEEKLEELNERWEELLELAEERQKKLEEA 212 (213)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999888766 7899999999999999999999999988753
No 9
>KOG4286|consensus
Probab=99.72 E-value=2.2e-13 Score=150.42 Aligned_cols=509 Identities=13% Similarity=0.201 Sum_probs=319.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhh--cCCCchHHHHH
Q psy6493 727 QHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEA--KNHHADSITQR 804 (1321)
Q Consensus 727 ~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~--~~~~~~~i~~~ 804 (1321)
+.|..++.++..|+-.... .....-.|..........++.+..+++. ..+-..+..|... +..++..+.
T Consensus 4 q~~~~~l~~f~~w~l~d~~--~~~~~l~dt~~~~~~~~~~~~~~~e~~a-----~~v~~~~~kl~~~l~~~~~~~~l~-- 74 (966)
T KOG4286|consen 4 QQFPLDLEKFLAWLLQDAT--RKERLLEDSKGVKELMKQWQDLQGEIEA-----HNLDENSQKILRSLEGSDDAVLLQ-- 74 (966)
T ss_pred hhhhhhHHHHHHHHHhhhh--hhHhhhhcccccHHHHHHHhcccccccc-----ccCchHHHHHHHHhcCCccchHHH--
Confidence 5688899999999922111 1111111222223344445555555554 2344456666665 223333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHhhhccc-ccCCCHHHHHHHHHhHHHHHHhhhhh
Q psy6493 805 CQQLQLKLDNLMALATKRKTKLMDNS-AYLQFMWKADVVESWIADKETHVKSE-EYGRDLSTVQTLLTKQETFDAGLHAF 882 (1321)
Q Consensus 805 ~~~l~~~~~~l~~~~~~r~~~Le~~~-~~~~~~~~~~~l~~wl~~~e~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ 882 (1321)
+ ++.+|.+|.+....-+.+|+.+. .|.++...+.++.+|+..+...+... |+|+|+..+..+-+-|++|+.++.+
T Consensus 75 ~--mn~~w~~l~kks~~ir~~lea~~~~w~kl~~~l~el~~wl~~kd~el~~q~p~ggd~~avq~q~~~~~a~~re~k~- 151 (966)
T KOG4286|consen 75 L--MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT- 151 (966)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhHHHHhcCCCCCChHHHHHHHHHHHHHHHHHhh-
Confidence 3 99999999999999999999877 68899999999999999999988754 8899999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhcCCCC----------h----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6493 883 EHEGIQNITTLKDQLVASNHDQ----------T----------PAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQ 942 (1321)
Q Consensus 883 ~~~~~~~~~~~~~~l~~~~~~~----------~----------~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~ 942 (1321)
....+-+..+.+..++...|-. . ..++.....++..|+.|...+..+.+.++.++.++
T Consensus 152 k~~~~~s~~e~a~~fl~~~p~e~~e~~~~~~e~~p~~r~q~~~r~~~kqa~~~~~~we~l~~~~~~w~k~v~~~le~l-- 229 (966)
T KOG4286|consen 152 KEPVIMSTLETARIFLTEQPLEGLEKYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL-- 229 (966)
T ss_pred cccHHHHHHHHHHHHHhcCCCcchhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHH--
Confidence 4677888888888777643210 0 12455557889999999999999999999998866
Q ss_pred HHHHHHHHHHHhhHHHhhHHhhhhhcCC--CcCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCc
Q psy6493 943 IEDLYLTFAKKASSFNSWFENAEEDLTD--PVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNP 1020 (1321)
Q Consensus 943 ~~~l~~~f~~~~~~~~~wl~~~e~~l~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~ 1020 (1321)
.+....++++.--|..+|..... |+..--++.++..+++.++|..+|...+..|+.+++++.+|........+
T Consensus 230 -----~elq~a~~el~~~l~~ae~~~~~w~pvgdl~idsl~~h~e~~~~~~~ei~p~~~~v~~vndla~ql~~~d~~ls~ 304 (966)
T KOG4286|consen 230 -----QELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLDIQLSP 304 (966)
T ss_pred -----HHHHHHHHHHHHhhhHHHhhhhccccHHHHHHhHHHHHHHHHHHHHhhcchHhhchhhHHHHHHHhhhcccCCCh
Confidence 46777888888888888877766 33223457789999999999999999999999999999999988776677
Q ss_pred chhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH-------------------------
Q psy6493 1021 YTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWL------------------------- 1075 (1321)
Q Consensus 1021 ~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~~f~~~~~~l~~wl------------------------- 1075 (1321)
+...+++.|+.||..|+..+..|..+|..+. ..|.-..+.|....-. ..|=
T Consensus 305 ~~~~~le~~n~rwk~Lq~SV~~rl~qlrna~---~dfgp~sqhflsqsvq-~pw~rais~nkvpyyinh~~q~t~wdhp~ 380 (966)
T KOG4286|consen 305 YNLSTLEDLNTRWKLLQVSVPDRLTQLRNAH---RDFGPISQHFLSQSVQ-GPWERAISPNKVPYYINHETQTTCWDHPK 380 (966)
T ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCcHHHHHhhccCc-ccchhccCccccchhhcccchhhhccchH
Confidence 7788999999999999999999999998766 2233333444221111 1131
Q ss_pred ----HHHHHhhhcccccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHHhhcccccCCchhHhHHHHHHHHHHHHHHH
Q psy6493 1076 ----TETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMR 1151 (1321)
Q Consensus 1076 ----~~~~~~~~~~~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 1151 (1321)
-....++++..=+.=.---++..++..+---...+.-+ -..+...+...+.....-+..+.+-...+..+..+
T Consensus 381 ~tel~q~lad~nnvKfsaYRtAmKlr~LQK~l~ldlv~ltl~---l~if~~h~l~~~~e~m~~~~~i~~L~~~y~~l~e~ 457 (966)
T KOG4286|consen 381 MTELYQSLADLNNVKFSAYRTAMKLRRLQKALCLDLLSLSLA---LDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQE 457 (966)
T ss_pred HHHHHHHHHHhcCeeehhHHHHHHHHHHHHHHHhccccHHHH---HHHHHHhcccccCcCCCHHHHHHHHHHHHHHHHHH
Confidence 11111111110000000001111111111111111111 11111111111111111111111111111111111
Q ss_pred HHHhHHHHHHHhhhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCC
Q psy6493 1152 MQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRD 1231 (1321)
Q Consensus 1152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1231 (1321)
+.. . -+++-.--.-+.=.++.||+.++|.|..-+|+..+..+...+ ..+.+..+|..+..++.
T Consensus 458 ~g~--------~--v~v~l~vD~~lN~llNvyD~~R~g~irvls~ki~~i~lck~~-------leek~~ylF~~vA~~~s 520 (966)
T KOG4286|consen 458 HGN--------L--VNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKIGIISLCKAH-------LEDKYRYLFKQVASSTS 520 (966)
T ss_pred ccc--------c--cccchHHHHHHHHHHHhcccCCCcceEEeeehhhHHHHhcch-------hHHHHHHHHHHHcCchh
Confidence 111 1 111111112234456789999999999999999888877665 67778899999876554
Q ss_pred ccccHHHHHHHHhhhh-----------hcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhC
Q psy6493 1232 GHVSLQEYMAFMISKE-----------TENVQSSEEIENAFHAIAASDRPYVTKEELYANL 1281 (1321)
Q Consensus 1232 g~i~~~ef~~~~~~~~-----------~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l 1281 (1321)
- ++-..|-.++.... .+....+-.++.+|... +|...|....|...+
T Consensus 521 q-~~q~~l~lLL~dliqipr~lGE~aAfGgsNvepsvrsCF~~v--~~~pei~~~~f~dw~ 578 (966)
T KOG4286|consen 521 Q-CDQRRLGLLLHDLIQIPRQLGEVAAFGGSNIEPSVRSCFQFV--NNKPEIEAALFLDWM 578 (966)
T ss_pred h-HHHHHHHHHHHHHHHHHHHHhHHHhhcCCCCChHHHHHHHhc--CCCCcchHHHHHHHh
Confidence 3 33444444332211 11223345688999943 788899999999844
No 10
>KOG0035|consensus
Probab=99.71 E-value=2.5e-17 Score=190.37 Aligned_cols=479 Identities=25% Similarity=0.425 Sum_probs=391.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhcccccCCC-HHHHHHHHHhHHHHHHhhhhhhhhhHHHHHHHHHHHHhcCCCChHHHH
Q psy6493 831 AYLQFMWKADVVESWIADKETHVKSEEYGRD-LSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIV 909 (1321)
Q Consensus 831 ~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~ 909 (1321)
-...|......-..|.-..+..+...+++.+ +..++...+.|+.|..++.. +...+..+..++..|......++..+.
T Consensus 395 ~~~~f~~~~s~~~~~~pg~e~~l~~~d~~~~lle~~ke~~~~~ea~~~~~~~-~~~~~e~~~ai~~~~~~~~~~~~~~~a 473 (890)
T KOG0035|consen 395 LASKFSQKASLHESWTPGKEQVLFLNDYGQALLEECKELTKKHEAFESDLSA-HQDNVEAFCAIAHELNELLYDDAKLVA 473 (890)
T ss_pred hhhhccccCchhhhhccchhhhhhhcchHHHHHHHHHhhcccccccccchhh-hhcchhHHHHHHHHhhhhhhhhhhhhh
Confidence 3456777778888888888888876666544 57889999999999999995 888999999999999888777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHhhHHhhhhhcCCCcCCCCHHHHHHHHHHHHH
Q psy6493 910 KRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQ 989 (1321)
Q Consensus 910 ~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~ 989 (1321)
.....+.+.|.++..+...|+..|............+.-.|..+...+..|+..+-..+.+.....++.+.+.++..|..
T Consensus 474 ~~~q~i~dq~~~~~~ls~~r~pal~~~~~~~dk~~~~~le~a~Raa~~~~~l~~~~~d~~d~~~~~~ire~~~~~~a~~~ 553 (890)
T KOG0035|consen 474 ADCQHICDQWDDLGQLSRKRRPALMQMEKVLDKLAVLTLEFAKRAAPFNNWLKGVQEDLQDNEISYSIREIQRLRAADLQ 553 (890)
T ss_pred hhhhhccccccccchhhhhhchhhhhhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhcccchhccchHhhhccchhhhh
Confidence 99999999999999999989999988888777777788899999999999999987777776666677788888877777
Q ss_pred HHHHHHhhHHHHHHHH---HHHHHHHh-cCC----CCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q psy6493 990 FQASLSSAQADFEALA---ALDQQIKS-FNV----GPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALR 1061 (1321)
Q Consensus 990 ~~~~l~~~~~~~~~l~---~~~~~L~~-~~~----~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~ 1061 (1321)
|...+...-..-..+. ..+..... .++ ..+|++... +...|+.+......+...+.....++..+..+.
T Consensus 554 ~k~t~p~a~~~~~~~~~e~~e~~~~~~~~~~~~~~~~np~~~~s---~~~~~d~v~~~~~~~~~~~~~~~~~q~~~~s~~ 630 (890)
T KOG0035|consen 554 FKSTLPEADGEGQKISDEEKEREKVSEQLNPKIEPDTNPYTTLS---IYGKWDAVLSSVPDRDSIEANVHARQQPNESLR 630 (890)
T ss_pred hcccCccccchhhhhhhhhhHHHHhhhhcCcccccccccccccc---cccchhhhcccccccchhhHHHHHhhccCcccc
Confidence 7765554443332222 12222221 222 224555544 889999999999999999999898999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh----cccccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHHhhcccccCCchhHhH
Q psy6493 1062 KEFAKHANAFHQWLTETRTSMM----EGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVG 1137 (1321)
Q Consensus 1062 ~~f~~~~~~l~~wl~~~~~~~~----~~~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1137 (1321)
..|...++....|+.......+ ...++++.++..++....-+...+++.+.+....+.+.+.-+.+++++.|++..
T Consensus 631 ~~~~q~an~~~p~vp~~~~e~s~~~~~~~gt~e~~~~rLr~~~~~~~~~k~~~~~~~~~~q~~~~~~~~~~~~~~~~~e~ 710 (890)
T KOG0035|consen 631 RVFAQQANLDGPWVPAKMEESSRININDQGTLEDRLERLRETEERSMNYKSNGDLLAKQHQLMQEDIIFENKHTRYTMED 710 (890)
T ss_pred ccccccccCCCcccCchhhcccccccccCCCHHHHHHHHHHHHHHhhccCcchhHHHHHHHHhhhhccccccccccchhh
Confidence 9999999999999999876665 348999999999999999999999999999999999999888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCch
Q psy6493 1138 LAQQWDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP 1217 (1321)
Q Consensus 1138 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 1217 (1321)
++.+|+.....+.+.+...++++..+.++..+.....+|+..|+.|+....|.+++.+|..+|..+|++... +.....
T Consensus 711 ~~~g~e~~~~~~~~~~~~~en~il~R~sk~~sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~--ee~~~~ 788 (890)
T KOG0035|consen 711 LKVGWEELLTIIERTINESENEILERDSKGTSQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEE--EEQGIA 788 (890)
T ss_pred ccccccccccccccccccHHHHHHHhcccchhHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccch--hHHHHH
Confidence 999999999999999899999999999999999999999999999999999999999999999999998621 111234
Q ss_pred HHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhhHHHHHHcCCCCC
Q psy6493 1218 EFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKEMADYCVERMKPYV 1297 (1321)
Q Consensus 1218 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~~~~~~~~~~~~ 1297 (1321)
++..++...|..+.|.++|.+|..+|.+.. ........+..+|..+-++.. +|..+||..-..+..-+.++..|+.+-
T Consensus 789 e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~-e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~~~d~lv~d~~~~e~~~~~ 866 (890)
T KOG0035|consen 789 EWFRLVNKKNPLIQGQVQLLEFEDDLEREY-EDLDTELRAILAFEDWAKTKA-YLLLEELVRERDELVRDLDIQEMAAYD 866 (890)
T ss_pred HHHHHHhccCcccccceeHHHHHhHhhhhh-hhhcHHHHHHHHHHHHHcchh-HHHHHHHHhhccHhhHHHHHHhhcccc
Confidence 455567777888789999999999997653 356677788899998876544 999999999777766677777787655
Q ss_pred CCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1298 DPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1298 d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
+.. ...|.|+|..|...++.
T Consensus 867 ~~~---~~~r~Ld~~~~s~~~~~ 886 (890)
T KOG0035|consen 867 EDE---RLPRGLDQVKFSSSLYE 886 (890)
T ss_pred cCC---cccccchHHHHHHHhhh
Confidence 444 35678999999877653
No 11
>KOG0028|consensus
Probab=99.67 E-value=9.4e-16 Score=136.59 Aligned_cols=144 Identities=25% Similarity=0.403 Sum_probs=123.6
Q ss_pred hcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1165 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1165 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
...+++++..+++..|..||++++|+|+..+|..+++++|+.+ ...++..++..+|.+|.|.|+|++|+..+.
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~-------~k~ei~kll~d~dk~~~g~i~fe~f~~~mt 96 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEP-------KKEEILKLLADVDKEGSGKITFEDFRRVMT 96 (172)
T ss_pred CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCc-------chHHHHHHHHhhhhccCceechHHHHHHHH
Confidence 4467788889999999999999999999999999999999998 789999999999999999999999999987
Q ss_pred hhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCC---HhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1245 SKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLT---KEMADYCVERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1245 ~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~---~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
..... ..+.+++..+|+.+|.|++|.|+..+|+.... +.-.+.-+..|+..+|.+ +| |.|+-++|+.+|..
T Consensus 97 ~k~~e-~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d-~d---gevneeEF~~imk~ 170 (172)
T KOG0028|consen 97 VKLGE-RDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRD-GD---GEVNEEEFIRIMKK 170 (172)
T ss_pred HHHhc-cCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhccc-cc---ccccHHHHHHHHhc
Confidence 76543 44999999999999999999999999999432 211233333455589999 88 99999999998864
No 12
>KOG4286|consensus
Probab=99.63 E-value=1.9e-13 Score=150.85 Aligned_cols=308 Identities=18% Similarity=0.273 Sum_probs=248.5
Q ss_pred HHHHHhHHHHHHHHHHhhhhhcCCcCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHHHHHHH
Q psy6493 621 HQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLK 700 (1321)
Q Consensus 621 ~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l~ 700 (1321)
+.|..++..+..|+-..... ....-.|........+.++.+..+++. ..+-..+..|++....+...+.-.+
T Consensus 4 q~~~~~l~~f~~w~l~d~~~--~~~~l~dt~~~~~~~~~~~~~~~e~~a-----~~v~~~~~kl~~~l~~~~~~~~l~~- 75 (966)
T KOG4286|consen 4 QQFPLDLEKFLAWLLQDATR--KERLLEDSKGVKELMKQWQDLQGEIEA-----HNLDENSQKILRSLEGSDDAVLLQL- 75 (966)
T ss_pred hhhhhhHHHHHHHHHhhhhh--hHhhhhcccccHHHHHHHhcccccccc-----ccCchHHHHHHHHhcCCccchHHHH-
Confidence 46888999999999432110 000111222234555666677777776 4555677777765444333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhhHH
Q psy6493 701 LLNQAWSELKQLAANRGQKLDESL-TYQHFLAKVEEEEAWISEKQQLLSV-EDYGDTMAAVQGLLKKHDAFETDFSVHRD 778 (1321)
Q Consensus 701 ~l~~~w~~l~~~~~~r~~~L~~~~-~~~~f~~~~~el~~wl~~~e~~l~~-~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 778 (1321)
++.+|+.|......-+.+|+.+. .|.++...+.++..|+..+...+.. .|+|+|...++.+-.-|++|+.+|..+.+
T Consensus 76 -mn~~w~~l~kks~~ir~~lea~~~~w~kl~~~l~el~~wl~~kd~el~~q~p~ggd~~avq~q~~~~~a~~re~k~k~~ 154 (966)
T KOG4286|consen 76 -MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP 154 (966)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhHHHHhcCCCCCChHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999998 8899999999999999999999875 48999999999999999999999999999
Q ss_pred HHHHHHHhhhHhhhhcCCC--------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q psy6493 779 RCADICSAGNKLIEAKNHH--------------------ADSITQRCQQLQLKLDNLMALATKRKTKLMDNS-AYLQFMW 837 (1321)
Q Consensus 779 ~v~~l~~~~~~L~~~~~~~--------------------~~~i~~~~~~l~~~~~~l~~~~~~r~~~Le~~~-~~~~~~~ 837 (1321)
.|-...+.++.++...+-. ...+......+++.|..|...+..+.+.++.++ .++++..
T Consensus 155 ~~~s~~e~a~~fl~~~p~e~~e~~~~~~e~~p~~r~q~~~r~~~kqa~~~~~~we~l~~~~~~w~k~v~~~le~l~elq~ 234 (966)
T KOG4286|consen 155 VIMSTLETARIFLTEQPLEGLEKYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQE 234 (966)
T ss_pred HHHHHHHHHHHHHhcCCCcchhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHH
Confidence 9999999999887553211 112344557888999999999999999999999 5778888
Q ss_pred HHHHHHHHHHhHHhhhcccccCCC--HHHHHHHHHhHHHHHHhhhhhhhhhHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q psy6493 838 KADVVESWIADKETHVKSEEYGRD--LSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDV 915 (1321)
Q Consensus 838 ~~~~l~~wl~~~e~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l 915 (1321)
.++++..-|..+|.....+.+.+| +++++..+++.+.|..++... +..|+.+|.++.+|......-.+.....+++|
T Consensus 235 a~~el~~~l~~ae~~~~~w~pvgdl~idsl~~h~e~~~~~~~ei~p~-~~~v~~vndla~ql~~~d~~ls~~~~~~le~~ 313 (966)
T KOG4286|consen 235 ATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPL-KENVSHVNDLARQLTTLDIQLSPYNLSTLEDL 313 (966)
T ss_pred HHHHHHHhhhHHHhhhhccccHHHHHHhHHHHHHHHHHHHHhhcchH-hhchhhHHHHHHHhhhcccCCChhhHhhHHHH
Confidence 999999999999999888755444 588999999999999999996 68899999999999888777778899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 916 IARWQKLLGDSNARKQRLLRMQE 938 (1321)
Q Consensus 916 ~~~w~~l~~~~~~r~~~L~~~~~ 938 (1321)
|.||..|...+..|...|.++..
T Consensus 314 n~rwk~Lq~SV~~rl~qlrna~~ 336 (966)
T KOG4286|consen 314 NTRWKLLQVSVPDRLTQLRNAHR 336 (966)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988765
No 13
>KOG0030|consensus
Probab=99.59 E-value=1.4e-14 Score=125.63 Aligned_cols=138 Identities=19% Similarity=0.346 Sum_probs=118.3
Q ss_pred CCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCC--CCccccHHHHHHHHh
Q psy6493 1167 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN--RDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1167 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~ 1244 (1321)
.+++++..+++.+|..||..++|.|+..+...+|+.+|.+| ++.++...+..++.+ +-.+|+|++|+-++.
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nP-------T~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q 76 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNP-------TNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQ 76 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCC-------cHHHHHHHHcCcccchhhhhhhhHHHHHHHHH
Confidence 45677889999999999999999999999999999999999 899999998888776 457899999999887
Q ss_pred hhhh-cccCCHHHHHHHHHHHccCCCCCcCHHHHHhhC-------CHhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHH
Q psy6493 1245 SKET-ENVQSSEEIENAFHAIAASDRPYVTKEELYANL-------TKEMADYCVERMKPYVDPKTERGIPGALDYIEFTR 1316 (1321)
Q Consensus 1245 ~~~~-~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l-------~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~ 1316 (1321)
.+.. ....+.+++...++.||++|+|+|...||++.| +.++++.+++ ...|.| |.|+|+.|++
T Consensus 77 ~vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Lla---g~eD~n------G~i~YE~fVk 147 (152)
T KOG0030|consen 77 QVAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLA---GQEDSN------GCINYEAFVK 147 (152)
T ss_pred HHHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHc---cccccC------CcCcHHHHHH
Confidence 6543 345677899999999999999999999999955 5677777665 445666 9999999999
Q ss_pred hhhc
Q psy6493 1317 TLFQ 1320 (1321)
Q Consensus 1317 ~~~~ 1320 (1321)
.+++
T Consensus 148 ~i~~ 151 (152)
T KOG0030|consen 148 HIMS 151 (152)
T ss_pred HHhc
Confidence 8875
No 14
>KOG0031|consensus
Probab=99.59 E-value=2.1e-14 Score=126.79 Aligned_cols=135 Identities=21% Similarity=0.353 Sum_probs=116.5
Q ss_pred hcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1165 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1165 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
...++..+|.+|+++|..+|.|++|+|+.++++.++.++|..+ ++.++..++.. +.|-|+|--|+.++.
T Consensus 23 Famf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~-------~d~elDaM~~E----a~gPINft~FLTmfG 91 (171)
T KOG0031|consen 23 FAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIA-------SDEELDAMMKE----APGPINFTVFLTMFG 91 (171)
T ss_pred HHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCC-------CHHHHHHHHHh----CCCCeeHHHHHHHHH
Confidence 4456788999999999999999999999999999999999988 89999999876 567899999999997
Q ss_pred hhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhC-------CHhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHh
Q psy6493 1245 SKETENVQSSEEIENAFHAIAASDRPYVTKEELYANL-------TKEMADYCVERMKPYVDPKTERGIPGALDYIEFTRT 1317 (1321)
Q Consensus 1245 ~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l-------~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~ 1317 (1321)
... ....+++.+..+|..||.+++|.|..+.|+..| ++++++.++. .+.++ .. |.|+|..|+..
T Consensus 92 ekL-~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r----~~p~d-~~---G~~dy~~~~~~ 162 (171)
T KOG0031|consen 92 EKL-NGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYR----EAPID-KK---GNFDYKAFTYI 162 (171)
T ss_pred HHh-cCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHH----hCCcc-cC---CceeHHHHHHH
Confidence 764 467889999999999999999999999999966 4666665554 45554 33 99999999998
Q ss_pred hh
Q psy6493 1318 LF 1319 (1321)
Q Consensus 1318 ~~ 1319 (1321)
|.
T Consensus 163 it 164 (171)
T KOG0031|consen 163 IT 164 (171)
T ss_pred HH
Confidence 86
No 15
>PTZ00183 centrin; Provisional
Probab=99.54 E-value=9.7e-14 Score=138.47 Aligned_cols=145 Identities=25% Similarity=0.401 Sum_probs=120.6
Q ss_pred hhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHH
Q psy6493 1164 NQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1243 (1321)
Q Consensus 1164 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 1243 (1321)
..+++++.++.++..+|..+|.+++|.|+..+|..++..+|..+ +...+..++..+|.+++|.|+|.+|+.++
T Consensus 7 ~~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~-------~~~~~~~l~~~~d~~~~g~i~~~eF~~~~ 79 (158)
T PTZ00183 7 ERPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEP-------KKEEIKQMIADVDKDGSGKIDFEEFLDIM 79 (158)
T ss_pred ccCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCC-------CHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 34678899999999999999999999999999999999999877 67789999999999999999999999987
Q ss_pred hhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhh---HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1244 ISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKEM---ADYCVERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1244 ~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~---~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
.... ....+...+..+|..+|.+++|+|+..+|..++...+ -...+..++..+|.+ ++ |.|+|++|+.+|.+
T Consensus 80 ~~~~-~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~-~~---g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 80 TKKL-GERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRN-GD---GEISEEEFYRIMKK 154 (158)
T ss_pred HHHh-cCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC-CC---CcCcHHHHHHHHhc
Confidence 6542 2345667899999999999999999999998654221 122233344478888 88 99999999999865
No 16
>PTZ00184 calmodulin; Provisional
Probab=99.53 E-value=5.3e-14 Score=139.01 Aligned_cols=142 Identities=26% Similarity=0.507 Sum_probs=118.4
Q ss_pred CCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1167 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1167 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
.++++++..+...|..+|.+++|.|+..+|..++..+|..+ +...+..++..+|.+++|.|+|++|+.++...
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~-------~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~ 76 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-------TEAELQDMINEVDADGNGTIDFPEFLTLMARK 76 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCC-------CHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHh
Confidence 46788899999999999999999999999999999999877 67789999999999999999999999988654
Q ss_pred hhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhh---HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1247 ETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKEM---ADYCVERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1247 ~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~---~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
. ........+..+|..||.+++|+|+.++|...+...+ -...+..++..+|.+ ++ |.|+|++|+.++..
T Consensus 77 ~-~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~---g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 77 M-KDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD-GD---GQINYEEFVKMMMS 148 (149)
T ss_pred c-cCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCC-CC---CcCcHHHHHHHHhc
Confidence 2 2234556789999999999999999999998663321 123344455678888 88 99999999998753
No 17
>KOG0034|consensus
Probab=99.40 E-value=3.2e-12 Score=124.37 Aligned_cols=138 Identities=21% Similarity=0.367 Sum_probs=115.9
Q ss_pred CCCHHHHHHHHHhhhhcccc-CcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCcc-ccHHHHHHHHh
Q psy6493 1167 GVSEDALKEFSMMFKHFDKD-KSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGH-VSLQEYMAFMI 1244 (1321)
Q Consensus 1167 ~~~~~~~~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~-i~~~ef~~~~~ 1244 (1321)
.++..++..+...|..+|.+ ++|.|+.++|..+. .+..+| ....++..++.+++|. |+|.+|+..+.
T Consensus 26 ~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np----------~~~rI~~~f~~~~~~~~v~F~~Fv~~ls 94 (187)
T KOG0034|consen 26 QFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNP----------LADRIIDRFDTDGNGDPVDFEEFVRLLS 94 (187)
T ss_pred ccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCc----------HHHHHHHHHhccCCCCccCHHHHHHHHh
Confidence 38889999999999999999 99999999999988 333333 5678888999888888 99999999986
Q ss_pred hhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhC--------C--HhhHHHHHHcCCCCCCCCCCCCCCCCcchHHH
Q psy6493 1245 SKETENVQSSEEIENAFHAIAASDRPYVTKEELYANL--------T--KEMADYCVERMKPYVDPKTERGIPGALDYIEF 1314 (1321)
Q Consensus 1245 ~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l--------~--~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF 1314 (1321)
... ........++-+|+.||.+++|+|+.++|...+ + .+....+++.++..+|.+ +| |.|+|+||
T Consensus 95 ~f~-~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d-~D---G~IsfeEf 169 (187)
T KOG0034|consen 95 VFS-PKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTD-GD---GKISFEEF 169 (187)
T ss_pred hhc-CCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCC-CC---CcCcHHHH
Confidence 653 344455699999999999999999999999954 2 445567777788889999 99 99999999
Q ss_pred HHhhhc
Q psy6493 1315 TRTLFQ 1320 (1321)
Q Consensus 1315 ~~~~~~ 1320 (1321)
.+.+.+
T Consensus 170 ~~~v~~ 175 (187)
T KOG0034|consen 170 CKVVEK 175 (187)
T ss_pred HHHHHc
Confidence 998865
No 18
>KOG0037|consensus
Probab=99.37 E-value=2e-12 Score=123.37 Aligned_cols=129 Identities=16% Similarity=0.258 Sum_probs=108.6
Q ss_pred HHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccC
Q psy6493 1173 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQ 1252 (1321)
Q Consensus 1173 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 1252 (1321)
...+...|...|.|++|.|+.+|+..+|...+.++ .+.+.++.|+..+|.+++|+|+|.||..++..+
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~------Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i------ 123 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSP------FSIETCRLMISMFDRDNSGTIGFKEFKALWKYI------ 123 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCC------CCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH------
Confidence 34678889999999999999999999998665543 277899999999999999999999999999776
Q ss_pred CHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhhH---HHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1253 SSEEIENAFHAIAASDRPYVTKEELYANLTKEMA---DYCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1253 ~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~---~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
..++.+|+.||+|++|.|+..||+.+|+..+. +.+.+.+++.+|.. +. |.|+|++|+.+++
T Consensus 124 --~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~-~~---g~i~FD~FI~ccv 187 (221)
T KOG0037|consen 124 --NQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRF-GG---GRIDFDDFIQCCV 187 (221)
T ss_pred --HHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccc-cC---CceeHHHHHHHHH
Confidence 67999999999999999999999998765543 34444455567755 45 9999999999875
No 19
>KOG0044|consensus
Probab=99.28 E-value=2.4e-11 Score=118.00 Aligned_cols=143 Identities=22% Similarity=0.306 Sum_probs=117.3
Q ss_pred hhhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHH
Q psy6493 1163 RNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAF 1242 (1321)
Q Consensus 1163 ~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~ 1242 (1321)
...+.++..++..|..-|.. ...+|.++..+|+.++..+..... +......+|..+|.+++|.|+|.||+..
T Consensus 18 ~~~t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd------~~~y~~~vF~~fD~~~dg~i~F~Efi~a 89 (193)
T KOG0044|consen 18 VQQTKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGD------ASKYAELVFRTFDKNKDGTIDFLEFICA 89 (193)
T ss_pred HHhcCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCC------HHHHHHHHHHHhcccCCCCcCHHHHHHH
Confidence 34678888898888888876 344799999999999998875331 5667788999999999999999999998
Q ss_pred HhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhC-------C-------HhhHHHHHHcCCCCCCCCCCCCCCCC
Q psy6493 1243 MISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANL-------T-------KEMADYCVERMKPYVDPKTERGIPGA 1308 (1321)
Q Consensus 1243 ~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l-------~-------~~~~~~~~~~~~~~~d~~~~d~~~g~ 1308 (1321)
+.... .+...+.+.-+|+.||.||+|+|+.+|+...+ . +......+..++..+|.| +| |.
T Consensus 90 ls~~~--rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n-~D---g~ 163 (193)
T KOG0044|consen 90 LSLTS--RGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKN-KD---GK 163 (193)
T ss_pred HHHHc--CCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCC-CC---Cc
Confidence 86653 56777888999999999999999999999843 1 122456777788899999 99 99
Q ss_pred cchHHHHHhhh
Q psy6493 1309 LDYIEFTRTLF 1319 (1321)
Q Consensus 1309 i~~~eF~~~~~ 1319 (1321)
|++++|+....
T Consensus 164 lT~eef~~~~~ 174 (193)
T KOG0044|consen 164 LTLEEFIEGCK 174 (193)
T ss_pred ccHHHHHHHhh
Confidence 99999998654
No 20
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=99.22 E-value=9e-05 Score=97.52 Aligned_cols=202 Identities=12% Similarity=0.168 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhHHhhhcccccCCCHHHHHHHHHhHHHHHH
Q psy6493 800 SITQRCQQLQLKLDNLMALATKRKTKLMDNSA--YLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDA 877 (1321)
Q Consensus 800 ~i~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~--~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~ 877 (1321)
........++..|..+..........+..... -.++...++.+..|....-. ..|.|+..+..+-.+.+.+..
T Consensus 711 ~~~e~~~e~~~~~~~~~~~~d~~i~~i~~~i~~~~~~~~~~~~~le~~~~~eL~-----~~GvD~~~I~~l~~~i~~L~~ 785 (1201)
T PF12128_consen 711 QLKELRNELKAQWQELEAELDEQIEQIKQEIAAAKQEAKEQLKELEQQYNQELA-----GKGVDPERIQQLKQEIEQLEK 785 (1201)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHHH
Confidence 45555566777888888888888777777663 45777888888888874432 346677777777677766666
Q ss_pred hhhhhhhhhHHHHHHHHHHHHhc------CCCChHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhHH
Q psy6493 878 GLHAFEHEGIQNITTLKDQLVAS------NHDQTPAIVKRHGDVIARWQKLL-------GDSNARKQRLLRMQEQFRQIE 944 (1321)
Q Consensus 878 ~l~~~~~~~~~~~~~~~~~l~~~------~~~~~~~i~~~~~~l~~~w~~l~-------~~~~~r~~~L~~~~~~~~~~~ 944 (1321)
+|.... ..-..|..--.-+-.. -....|.+..++..+......+. ..+..+...++.....+.
T Consensus 786 ~l~~ie-~~r~~V~eY~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~le~~~~~~~--- 861 (1201)
T PF12128_consen 786 ELKRIE-ERRAEVIEYEDWLQEEWDKVDELREEKPELEEQLRDLEQELQELEQELNQLQKEVKQRRKELEEELKALE--- 861 (1201)
T ss_pred HHHHHH-HhHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 666642 2222222222111111 11123455555555555544444 444444455544443332
Q ss_pred HHHHHHHHHhhHHHhhHHhhhhhcCCCcCCCCHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy6493 945 DLYLTFAKKASSFNSWFENAEEDLTDPVRCNSIE-EIRALREAHAQFQASLSSAQADFEALAALDQQI 1011 (1321)
Q Consensus 945 ~l~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L 1011 (1321)
+...+.......+..++... ..+..|....++. .+...+..+..+...+......+.........+
T Consensus 862 ~~~~~~~~~l~~l~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~f~~~ 928 (1201)
T PF12128_consen 862 EQLEQLEEQLRRLRDLLEKL-AELSEPPNAEDAEGSVDERLRDLEDLLQRRKRLREELKKAVERFKGV 928 (1201)
T ss_pred HHHHHHHHHHHHHHHHHhhh-hhcCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333333443344333 2222222222222 345666666666666666555555444333333
No 21
>smart00150 SPEC Spectrin repeats.
Probab=99.08 E-value=1.1e-09 Score=99.65 Aligned_cols=99 Identities=34% Similarity=0.649 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHhHHhhhcccccCCCHHHHHHHHHhHHHHHHhhhhhhhhhHHHHHHHHHHHHhcCCCChHHHHHHHH
Q psy6493 834 QFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHG 913 (1321)
Q Consensus 834 ~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~ 913 (1321)
+|...+..+..||..++..+.+.++|.|++.++.++.+|+.|..++.. +...+..++..|..|+..++++++.|...++
T Consensus 2 ~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~~~~~~~~~~e~~~-~~~~v~~~~~~~~~L~~~~~~~~~~i~~~~~ 80 (101)
T smart00150 2 QFLRDADELEAWLSEKEALLASEDLGKDLESVEALLKKHEALEAELEA-HEERVEALNELGEQLIEEGHPDAEEIEERLE 80 (101)
T ss_pred chHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 588999999999999999998888899999999999999999999999 5799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy6493 914 DVIARWQKLLGDSNARKQRL 933 (1321)
Q Consensus 914 ~l~~~w~~l~~~~~~r~~~L 933 (1321)
.|+.+|+.|+..+..|...|
T Consensus 81 ~l~~~w~~l~~~~~~r~~~L 100 (101)
T smart00150 81 ELNERWEELKELAEERRQKL 100 (101)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999876
No 22
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=99.08 E-value=0.00035 Score=92.12 Aligned_cols=200 Identities=11% Similarity=0.160 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHH---HHHHHHHH
Q psy6493 481 EAVQARLASIADQWEFLTQKTTEKSLKLKEANK--QRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASV---QNLIKKHQ 555 (1321)
Q Consensus 481 ~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~--~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~---~~~l~~~~ 555 (1321)
..........+..|..+...+......+...+. ...+...+..+..|... .|.+ .|.|+..+ +..+..+.
T Consensus 710 ~~~~e~~~e~~~~~~~~~~~~d~~i~~i~~~i~~~~~~~~~~~~~le~~~~~---eL~~--~GvD~~~I~~l~~~i~~L~ 784 (1201)
T PF12128_consen 710 EQLKELRNELKAQWQELEAELDEQIEQIKQEIAAAKQEAKEQLKELEQQYNQ---ELAG--KGVDPERIQQLKQEIEQLE 784 (1201)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHh--CCCCHHHHHHHHHHHHHHH
Confidence 345566678889999999999999999988874 68899999999999873 4433 34454444 44444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-------CC---CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q psy6493 556 LVEADIQAHDDRIKDMNGQADSLIDS-------GQ---FDASSIQEKRQSINERYERIKNLAAHRQARLNEANT-LHQFF 624 (1321)
Q Consensus 556 ~l~~ei~~~~~~v~~l~~~~~~L~~~-------~~---~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~-~~~f~ 624 (1321)
.--..|..+++.|..-..-.+..... .| .....+...+..+...+..+...+..+...++..+. +..-.
T Consensus 785 ~~l~~ie~~r~~V~eY~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~le~~~~~~~~~~ 864 (1201)
T PF12128_consen 785 KELKRIEERRAEVIEYEDWLQEEWDKVDELREEKPELEEQLRDLEQELQELEQELNQLQKEVKQRRKELEEELKALEEQL 864 (1201)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555566666555544443221 11 112345555666666666666666777777766655 44444
Q ss_pred HhHHHHHHHHHHhhhhhcCCcCCCCHH----HHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhh
Q psy6493 625 RDIADEESWIKEKKLLVGSDDYGRDLT----GVQNLKKKHKRLEAELASHQPAIQNVQETGEKLM 685 (1321)
Q Consensus 625 ~~~~~~~~Wl~~~~~~l~~~~~~~~~~----~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~ 685 (1321)
..+++.+.-+......+.....+.+.. .+...+..++.+...+......+..-......++
T Consensus 865 ~~~~~~l~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~f~~~l 929 (1201)
T PF12128_consen 865 EQLEEQLRRLRDLLEKLAELSEPPNAEDAEGSVDERLRDLEDLLQRRKRLREELKKAVERFKGVL 929 (1201)
T ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444443333322222222111112112 2345555555555555555555555555555444
No 23
>smart00150 SPEC Spectrin repeats.
Probab=99.07 E-value=1.4e-09 Score=98.81 Aligned_cols=100 Identities=38% Similarity=0.667 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhhcCCCchHHHHHHHH
Q psy6493 728 HFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQ 807 (1321)
Q Consensus 728 ~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~ 807 (1321)
.|...+.++..||.+++..+.+.++|.++..++.++++|+.|+.++..+++.|..+...|..|+..++++...|...+..
T Consensus 2 ~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~~~~~~~~~~e~~~~~~~v~~~~~~~~~L~~~~~~~~~~i~~~~~~ 81 (101)
T smart00150 2 QFLRDADELEAWLSEKEALLASEDLGKDLESVEALLKKHEALEAELEAHEERVEALNELGEQLIEEGHPDAEEIEERLEE 81 (101)
T ss_pred chHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 58999999999999999999888888999999999999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy6493 808 LQLKLDNLMALATKRKTKLM 827 (1321)
Q Consensus 808 l~~~~~~l~~~~~~r~~~Le 827 (1321)
|+.+|+.|+..+..|...|+
T Consensus 82 l~~~w~~l~~~~~~r~~~L~ 101 (101)
T smart00150 82 LNERWEELKELAEERRQKLE 101 (101)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999998773
No 24
>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure. These include spectrin alpha and beta subunits [, ], alpha-actinin [] and dystrophin. The spectrin repeat forms a three-helix bundle. The second helix is interrupted by proline in some sequences. The repeats are defined by a characteristic tryptophan (W) residue at position 17 in helix A and a leucine (L) at 2 residues from the carboxyl end of helix C.; GO: 0005515 protein binding; PDB: 1HCI_A 1QUU_A 3FB2_B 1S35_A 1U5P_A 1U4Q_A 1CUN_B 1YDI_B 3EDV_A 1AJ3_A ....
Probab=99.06 E-value=3.2e-09 Score=97.36 Aligned_cols=104 Identities=22% Similarity=0.452 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhhcCCCchHHHHH
Q psy6493 725 TYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQR 804 (1321)
Q Consensus 725 ~~~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~ 804 (1321)
.+++|...++++..||..++..+...++|.++..++.++.+|+.|..+|..+++.++.+...|..|+..+++++..|...
T Consensus 2 ~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~l~~l~~~~~~L~~~~~~~~~~i~~~ 81 (105)
T PF00435_consen 2 QLQQFQQEADELLDWLQETEAKLSSSEPGSDLEELEEQLKKHKELQEEIESRQERLESLNEQAQQLIDSGPEDSDEIQEK 81 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCTHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 46789999999999999999999777779999999999999999999999999999999999999988888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 805 CQQLQLKLDNLMALATKRKTKLMD 828 (1321)
Q Consensus 805 ~~~l~~~~~~l~~~~~~r~~~Le~ 828 (1321)
+..|+.+|+.|+..+.+|...|++
T Consensus 82 ~~~l~~~w~~l~~~~~~r~~~Lee 105 (105)
T PF00435_consen 82 LEELNQRWEALCELVEERRQKLEE 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999874
No 25
>KOG0036|consensus
Probab=99.02 E-value=1.1e-09 Score=114.31 Aligned_cols=133 Identities=19% Similarity=0.315 Sum_probs=112.1
Q ss_pred CHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCC-CCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhh
Q psy6493 1169 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYD-LPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKE 1247 (1321)
Q Consensus 1169 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 1247 (1321)
+++...+++.+|..||.+++|.++..++...+..++.+ + .......+|..+|.+.+|.++|.+|..++...
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~-------~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~- 80 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKP-------NYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK- 80 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCC-------chHHHHHHHHhcccCcCCcccHHHHHHHHHHh-
Confidence 44555679999999999999999999999999988876 4 56778899999999999999999999998544
Q ss_pred hcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhhH---HHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1248 TENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKEMA---DYCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1248 ~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~---~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
+..+..+|..+|.++||.|+..|+...+...++ ++-.+.++..+|++ |. +.|++++|-..+.
T Consensus 81 ------E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~-g~---~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 81 ------ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKD-GK---ATIDLEEWRDHLL 145 (463)
T ss_pred ------HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccC-CC---eeeccHHHHhhhh
Confidence 367899999999999999999999997765543 23344556678889 88 9999999988764
No 26
>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure. These include spectrin alpha and beta subunits [, ], alpha-actinin [] and dystrophin. The spectrin repeat forms a three-helix bundle. The second helix is interrupted by proline in some sequences. The repeats are defined by a characteristic tryptophan (W) residue at position 17 in helix A and a leucine (L) at 2 residues from the carboxyl end of helix C.; GO: 0005515 protein binding; PDB: 1HCI_A 1QUU_A 3FB2_B 1S35_A 1U5P_A 1U4Q_A 1CUN_B 1YDI_B 3EDV_A 1AJ3_A ....
Probab=99.02 E-value=6.6e-09 Score=95.24 Aligned_cols=104 Identities=28% Similarity=0.620 Sum_probs=99.1
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy6493 88 EVQRFHRDVDETKDWIQEKDEALNNNDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRLMQTHPETAEQTYAK 167 (1321)
Q Consensus 88 ~~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~ 167 (1321)
.++.|...++.+..||..++..+...++|.++..++.++.+|+.|..++..+++.++.+...|..|...+|+++..|..+
T Consensus 2 ~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~l~~l~~~~~~L~~~~~~~~~~i~~~ 81 (105)
T PF00435_consen 2 QLQQFQQEADELLDWLQETEAKLSSSEPGSDLEELEEQLKKHKELQEEIESRQERLESLNEQAQQLIDSGPEDSDEIQEK 81 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCTHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 37899999999999999999999777779999999999999999999999999999999999999988889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q psy6493 168 QKEINEEWTQLTAKANTRKEKLLD 191 (1321)
Q Consensus 168 ~~~l~~~w~~l~~~~~~r~~~L~~ 191 (1321)
+..|+.+|..|...+..|...|++
T Consensus 82 ~~~l~~~w~~l~~~~~~r~~~Lee 105 (105)
T PF00435_consen 82 LEELNQRWEALCELVEERRQKLEE 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999874
No 27
>TIGR00606 rad50 rad50. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.90 E-value=0.0018 Score=86.87 Aligned_cols=86 Identities=8% Similarity=0.129 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHhhHHhhhhhcCCCcCCCCHHHHHHHHHH
Q psy6493 907 AIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNSWFENAEEDLTDPVRCNSIEEIRALREA 986 (1321)
Q Consensus 907 ~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~ 986 (1321)
.+...+..+....+.+..........++... ..|...++.+......+...+.... ...+......
T Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~y~~~~~----~~qL~~~e~e 978 (1311)
T TIGR00606 913 PLETFLEKDQQEKEELISSKETSNKKAQDKV----------NDIKEKVKNIHGYMKDIENKIQDGK----DDYLKQKETE 978 (1311)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHcCC----HHHHHHHHHH
Confidence 3445555666666666555555544444433 3566666666666666665554431 2234444444
Q ss_pred HHHHHHHHHhhHHHHHHHHH
Q psy6493 987 HAQFQASLSSAQADFEALAA 1006 (1321)
Q Consensus 987 ~~~~~~~l~~~~~~~~~l~~ 1006 (1321)
+......+...+..+..+..
T Consensus 979 l~~~~~~ie~le~e~~~l~~ 998 (1311)
T TIGR00606 979 LNTVNAQLEECEKHQEKINE 998 (1311)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555443
No 28
>KOG4223|consensus
Probab=98.90 E-value=3.2e-09 Score=108.26 Aligned_cols=139 Identities=19% Similarity=0.259 Sum_probs=106.3
Q ss_pred HHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhc--
Q psy6493 1172 ALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETE-- 1249 (1321)
Q Consensus 1172 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-- 1249 (1321)
....+..+|..+|.+++|+|+..++..++...-... .......-+..+|.+.+|.|+|++|...+......
T Consensus 75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~-------v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~ 147 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKY-------VVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPD 147 (325)
T ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHH-------HHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCcc
Confidence 345688899999999999999999999875443222 34556677888999999999999999877543110
Q ss_pred ------ccCCHH----HHHHHHHHHccCCCCCcCHHHHHhhCCHhhHHH----HHHcCCCCCCCCCCCCCCCCcchHHHH
Q psy6493 1250 ------NVQSSE----EIENAFHAIAASDRPYVTKEELYANLTKEMADY----CVERMKPYVDPKTERGIPGALDYIEFT 1315 (1321)
Q Consensus 1250 ------~~~~~~----~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~~~----~~~~~~~~~d~~~~d~~~g~i~~~eF~ 1315 (1321)
...... .-+.-|+..|.||+|.+|.+||..+|.|++.+. ++..-+...|+| || |.|+|+||+
T Consensus 148 ~~~d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn-~D---G~I~~eEfi 223 (325)
T KOG4223|consen 148 EFPDEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKN-GD---GKISLEEFI 223 (325)
T ss_pred ccccchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccC-CC---CceeHHHHH
Confidence 000111 135779999999999999999999999988643 344455678999 99 999999999
Q ss_pred HhhhcC
Q psy6493 1316 RTLFQN 1321 (1321)
Q Consensus 1316 ~~~~~~ 1321 (1321)
.-|+.+
T Consensus 224 gd~~~~ 229 (325)
T KOG4223|consen 224 GDLYSH 229 (325)
T ss_pred hHHhhc
Confidence 988763
No 29
>PLN02964 phosphatidylserine decarboxylase
Probab=98.87 E-value=7.2e-09 Score=120.62 Aligned_cols=105 Identities=24% Similarity=0.271 Sum_probs=92.2
Q ss_pred cCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcC-CCCCcccCCCCchH---HHHHHHhcCCCCCccccHHHHHH
Q psy6493 1166 SGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALG-YDLPMVEEGQPDPE---FEAILDLVDPNRDGHVSLQEYMA 1241 (1321)
Q Consensus 1166 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~ 1241 (1321)
+.++..++.++.++|..||+|++|.+ +..+++.+| ..+ +..+ +..+|..+|.+++|.|+|+||+.
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~p-------te~e~~fi~~mf~~~D~DgdG~IdfdEFl~ 203 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDP-------VETERSFARRILAIVDYDEDGQLSFSEFSD 203 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCC-------CHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 56778899999999999999999997 888999999 476 5555 78999999999999999999999
Q ss_pred HHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCH
Q psy6493 1242 FMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTK 1283 (1321)
Q Consensus 1242 ~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~ 1283 (1321)
++..+. ...+.+++..+|+.||+|++|+|+.+||...|..
T Consensus 204 lL~~lg--~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 204 LIKAFG--NLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHhc--cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 997642 4567889999999999999999999999997644
No 30
>KOG0037|consensus
Probab=98.85 E-value=8.6e-09 Score=98.92 Aligned_cols=92 Identities=17% Similarity=0.482 Sum_probs=82.2
Q ss_pred HHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhccc
Q psy6493 1172 ALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENV 1251 (1321)
Q Consensus 1172 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 1251 (1321)
.+..|+.+|..||.|++|.|+..||+.+|..+|+.+ +...+.-+++.+|..++|.|.|++|+.++..+
T Consensus 122 ~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~L-------spq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L----- 189 (221)
T KOG0037|consen 122 YINQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRL-------SPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL----- 189 (221)
T ss_pred HHHHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCC-------CHHHHHHHHHHhccccCCceeHHHHHHHHHHH-----
Confidence 456799999999999999999999999999999999 78888999999998889999999999999877
Q ss_pred CCHHHHHHHHHHHccCCCCCcC--HHHHH
Q psy6493 1252 QSSEEIENAFHAIAASDRPYVT--KEELY 1278 (1321)
Q Consensus 1252 ~~~~~~~~~F~~~D~~~~G~I~--~~el~ 1278 (1321)
..+..+|+.+|.+..|.|+ .++|.
T Consensus 190 ---~~lt~~Fr~~D~~q~G~i~~~y~dfl 215 (221)
T KOG0037|consen 190 ---QRLTEAFRRRDTAQQGSITISYDDFL 215 (221)
T ss_pred ---HHHHHHHHHhccccceeEEEeHHHHH
Confidence 4678999999999999875 45554
No 31
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.77 E-value=1.8e-08 Score=85.41 Aligned_cols=69 Identities=22% Similarity=0.308 Sum_probs=62.7
Q ss_pred HHHHHHHHhhhhccc-cCcCCCChHHHHHHHHH-cCCCCCcccCCCCc-hHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1171 DALKEFSMMFKHFDK-DKSGKLNQTEFKSCLRA-LGYDLPMVEEGQPD-PEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1171 ~~~~~~~~~F~~~D~-~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
..+..+..+|+.||+ +++|+|+..+|+.+|.. +|..+ +. ..+..++..+|.|++|.|+|+||+.++..+
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~l-------s~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLL-------KDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhc-------cCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 456779999999999 99999999999999998 88766 66 889999999999999999999999998765
No 32
>KOG0044|consensus
Probab=98.77 E-value=2.8e-08 Score=96.87 Aligned_cols=106 Identities=20% Similarity=0.310 Sum_probs=86.4
Q ss_pred HHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhc--
Q psy6493 1172 ALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETE-- 1249 (1321)
Q Consensus 1172 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-- 1249 (1321)
.......+|+.||.|++|.|+..||..++..+-... ..+.+...|..||.|++|.|++.|++.++.....-
T Consensus 62 ~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt-------~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~ 134 (193)
T KOG0044|consen 62 ASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGT-------LEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTG 134 (193)
T ss_pred HHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCc-------HHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcc
Confidence 344567789999999999999999999887765554 56778889999999999999999999887553211
Q ss_pred -------ccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHh
Q psy6493 1250 -------NVQSSEEIENAFHAIAASDRPYVTKEELYANLTKE 1284 (1321)
Q Consensus 1250 -------~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~ 1284 (1321)
...+++.+..+|..+|.|+||.||.+||.......
T Consensus 135 ~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d 176 (193)
T KOG0044|consen 135 SKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKAD 176 (193)
T ss_pred cccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhC
Confidence 12245678899999999999999999999976543
No 33
>KOG4223|consensus
Probab=98.74 E-value=2.8e-08 Score=101.56 Aligned_cols=135 Identities=21% Similarity=0.241 Sum_probs=100.7
Q ss_pred HHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhccc
Q psy6493 1172 ALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENV 1251 (1321)
Q Consensus 1172 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 1251 (1321)
.+..-+..|..-|.|++|.+|.+||..+|.--.++- ...-.+..-+..+|.|++|.|+++||+.-|.....+..
T Consensus 161 m~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~------M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~ 234 (325)
T KOG4223|consen 161 MIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPH------MKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEE 234 (325)
T ss_pred HHHHHHHHHhhcccCCCCcccHHHHHhccChhhcch------HHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCC
Confidence 445667789999999999999999999884322211 02234556678899999999999999998876543222
Q ss_pred CCH---HHHHHHHHHHccCCCCCcCHHHHHhhCCHhhH---HHHHHcCCCCCCCCCCCCCCCCcchHHHHH
Q psy6493 1252 QSS---EEIENAFHAIAASDRPYVTKEELYANLTKEMA---DYCVERMKPYVDPKTERGIPGALDYIEFTR 1316 (1321)
Q Consensus 1252 ~~~---~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~---~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~ 1316 (1321)
.+. .+-...|..+|+|+||+++.+|++..+-|.+. ......++-..|.| +| |++|++|.+.
T Consensus 235 epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~d-kD---~kLs~eEIl~ 301 (325)
T KOG4223|consen 235 EPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADED-KD---GKLSKEEILE 301 (325)
T ss_pred CcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccC-cc---ccccHHHHhh
Confidence 222 23456778889999999999999998866543 33445566688999 88 9999999875
No 34
>KOG0038|consensus
Probab=98.71 E-value=6.6e-08 Score=84.72 Aligned_cols=97 Identities=15% Similarity=0.323 Sum_probs=79.7
Q ss_pred HHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhh--------CCHhhHHHHH
Q psy6493 1219 FEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYAN--------LTKEMADYCV 1290 (1321)
Q Consensus 1219 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~--------l~~~~~~~~~ 1290 (1321)
-+.+...+..||.|.++|++|+.++.-. .......-.+..+|+.||-|+|++|..+++... |+++++..+.
T Consensus 73 k~ri~e~FSeDG~GnlsfddFlDmfSV~-sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ 151 (189)
T KOG0038|consen 73 KRRICEVFSEDGRGNLSFDDFLDMFSVF-SEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELIC 151 (189)
T ss_pred HHHHHHHhccCCCCcccHHHHHHHHHHH-HhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHH
Confidence 4456677788999999999999987544 333344456788999999999999999999883 4677888888
Q ss_pred HcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1291 ERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1291 ~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
..++...|.| || |+|+|.+|-.++.+
T Consensus 152 ekvieEAD~D-gD---gkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 152 EKVIEEADLD-GD---GKLSFAEFEHVILR 177 (189)
T ss_pred HHHHHHhcCC-CC---CcccHHHHHHHHHh
Confidence 8899999999 99 99999999888754
No 35
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.67 E-value=1.9e-07 Score=87.44 Aligned_cols=67 Identities=31% Similarity=0.545 Sum_probs=59.7
Q ss_pred HHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1172 ALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1172 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
...++..+|+.||.|++|+|+..++..++..+|... +++++..++..+|.+++|.|+|.+|+..+..
T Consensus 90 ~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~-------~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 90 KEEELREAFKLFDKDHDGYISIGELRRVLKSLGERL-------SDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred cHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccC-------CHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 445788999999999999999999999999999888 8899999999999999999999999987743
No 36
>KOG0027|consensus
Probab=98.60 E-value=1.7e-07 Score=91.28 Aligned_cols=105 Identities=21% Similarity=0.312 Sum_probs=88.4
Q ss_pred HHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCC
Q psy6493 1174 KEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQS 1253 (1321)
Q Consensus 1174 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 1253 (1321)
.++..++..+|.+++|.|+..+|..++...+....... .+..++...|..+|.+++|.|+..+|..++..+. ...+
T Consensus 44 ~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~--~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg--~~~~ 119 (151)
T KOG0027|consen 44 EELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE--ASSEELKEAFRVFDKDGDGFISASELKKVLTSLG--EKLT 119 (151)
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc--ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC--CcCC
Confidence 45778899999999999999999999988776541100 1345899999999999999999999999997764 4566
Q ss_pred HHHHHHHHHHHccCCCCCcCHHHHHhhCC
Q psy6493 1254 SEEIENAFHAIAASDRPYVTKEELYANLT 1282 (1321)
Q Consensus 1254 ~~~~~~~F~~~D~~~~G~I~~~el~~~l~ 1282 (1321)
.+.+...++.+|.|++|+|++.+|...+.
T Consensus 120 ~~e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 120 DEECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred HHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 88999999999999999999999987664
No 37
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.60 E-value=1.3e-07 Score=80.69 Aligned_cols=69 Identities=22% Similarity=0.434 Sum_probs=62.0
Q ss_pred HHHHHHHHhhhhcc-ccCcC-CCChHHHHHHHHH-----cCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHH
Q psy6493 1171 DALKEFSMMFKHFD-KDKSG-KLNQTEFKSCLRA-----LGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1243 (1321)
Q Consensus 1171 ~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 1243 (1321)
..+..+..+|..|| .+++| .|+..+|+.+|+. +|..+ +...+..++..+|.+++|.|+|.+|+.++
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~-------~~~~v~~~i~~~D~n~dG~v~f~eF~~li 77 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIK-------EQEVVDKVMETLDSDGDGECDFQEFMAFV 77 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCC-------CHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 35667999999998 79999 5999999999999 88877 77889999999999999999999999988
Q ss_pred hhh
Q psy6493 1244 ISK 1246 (1321)
Q Consensus 1244 ~~~ 1246 (1321)
...
T Consensus 78 ~~~ 80 (88)
T cd05027 78 AMV 80 (88)
T ss_pred HHH
Confidence 654
No 38
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.60 E-value=5.8e-08 Score=79.20 Aligned_cols=66 Identities=32% Similarity=0.637 Sum_probs=52.7
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHH
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1243 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 1243 (1321)
.++.+|..+|.|++|+|+..||..++..++...+. ......+..+|..+|.+++|.|+|.||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSD---EESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTH---HHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccH---HHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 37889999999999999999999999999876510 0023445556888999999999999998875
No 39
>TIGR00606 rad50 rad50. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.55 E-value=0.016 Score=77.91 Aligned_cols=18 Identities=11% Similarity=0.014 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHHhhhcc
Q psy6493 307 DCEQAENWMSAREAFLNA 324 (1321)
Q Consensus 307 ~~~~l~~wl~~~e~~l~~ 324 (1321)
.+..+...+...+..+..
T Consensus 472 ~~~~~~~~~~~~~~~~~~ 489 (1311)
T TIGR00606 472 RILELDQELRKAERELSK 489 (1311)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444555555555555543
No 40
>KOG0377|consensus
Probab=98.50 E-value=6.9e-07 Score=93.88 Aligned_cols=133 Identities=20% Similarity=0.365 Sum_probs=94.4
Q ss_pred HHHHHhhhhccccCcCCCChHHHHHHHHHc-CCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhccc-
Q psy6493 1174 KEFSMMFKHFDKDKSGKLNQTEFKSCLRAL-GYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENV- 1251 (1321)
Q Consensus 1174 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~- 1251 (1321)
.++.+.|..+|.+++|.|+...+..++..+ |.++ ++..+..-+ +..+.+|.+.|......+..-.....
T Consensus 464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~L-------PWr~L~~kl--a~~s~d~~v~Y~~~~~~l~~e~~~~ea 534 (631)
T KOG0377|consen 464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNL-------PWRLLRPKL--ANGSDDGKVEYKSTLDNLDTEVILEEA 534 (631)
T ss_pred hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCC-------cHHHhhhhc--cCCCcCcceehHhHHHHhhhhhHHHHH
Confidence 457888999999999999999999999654 6665 444444433 33456778988887765532110000
Q ss_pred ---------CCHHHHHHHHHHHccCCCCCcCHHHHHhhC-------CHhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHH
Q psy6493 1252 ---------QSSEEIENAFHAIAASDRPYVTKEELYANL-------TKEMADYCVERMKPYVDPKTERGIPGALDYIEFT 1315 (1321)
Q Consensus 1252 ---------~~~~~~~~~F~~~D~~~~G~I~~~el~~~l-------~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~ 1315 (1321)
.....++.+|..+|.|++|.|+.+||+... ...--+..+..+.+.+|.| +| |.|+++||+
T Consensus 535 ~~slvetLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~N-kD---G~IDlNEfL 610 (631)
T KOG0377|consen 535 GSSLVETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLN-KD---GKIDLNEFL 610 (631)
T ss_pred HhHHHHHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccC-CC---CcccHHHHH
Confidence 112357889999999999999999999932 1111133444566688999 99 999999999
Q ss_pred Hhhh
Q psy6493 1316 RTLF 1319 (1321)
Q Consensus 1316 ~~~~ 1319 (1321)
.++.
T Consensus 611 eAFr 614 (631)
T KOG0377|consen 611 EAFR 614 (631)
T ss_pred HHHh
Confidence 8864
No 41
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.48 E-value=4.5e-07 Score=80.10 Aligned_cols=70 Identities=23% Similarity=0.427 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1168 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1168 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
++++++..+..+|..||.+++|.|+..++..+++..|. +..++..++..+|.+++|.|+|.+|+.++...
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~---------~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGL---------PQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCC---------CHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 57889999999999999999999999999999998763 46789999999999999999999999988554
No 42
>PTZ00183 centrin; Provisional
Probab=98.43 E-value=1.1e-06 Score=87.51 Aligned_cols=99 Identities=23% Similarity=0.363 Sum_probs=83.7
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHc-CCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCC
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRAL-GYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQS 1253 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 1253 (1321)
.+..+|..+|.+++|.|+..+|..++... .... ....+..+|..+|.+++|.|++.+|..++... ....+
T Consensus 54 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~-------~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~--~~~l~ 124 (158)
T PTZ00183 54 EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERD-------PREEILKAFRLFDDDKTGKISLKNLKRVAKEL--GETIT 124 (158)
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCC-------cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh--CCCCC
Confidence 47788999999999999999999887653 2222 45678899999999999999999999998654 24567
Q ss_pred HHHHHHHHHHHccCCCCCcCHHHHHhhCC
Q psy6493 1254 SEEIENAFHAIAASDRPYVTKEELYANLT 1282 (1321)
Q Consensus 1254 ~~~~~~~F~~~D~~~~G~I~~~el~~~l~ 1282 (1321)
...+..+|..+|.+++|.|+.++|...+.
T Consensus 125 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 125 DEELQEMIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 78899999999999999999999988764
No 43
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.40 E-value=1.9e-07 Score=76.19 Aligned_cols=58 Identities=24% Similarity=0.426 Sum_probs=32.9
Q ss_pred HHHHHHHHccCCCCCcCHHHHHhhCC-------HhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhh
Q psy6493 1257 IENAFHAIAASDRPYVTKEELYANLT-------KEMADYCVERMKPYVDPKTERGIPGALDYIEFTRTL 1318 (1321)
Q Consensus 1257 ~~~~F~~~D~~~~G~I~~~el~~~l~-------~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~ 1318 (1321)
++.+|+.||.|++|+|+.+||...+. +..++..+..+++.+|+| +| |.|+|+||+.+|
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d-~d---G~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTD-GD---GRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTT-SS---SSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCC-Cc---CCCcHHHHhccC
Confidence 45566666666666666666666331 333444444455556666 66 666666666554
No 44
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=98.40 E-value=1.8e-07 Score=73.28 Aligned_cols=67 Identities=51% Similarity=0.929 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1252 QSSEEIENAFHAIAASDRPYVTKEELYANLTKEMADYCVERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1252 ~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
.+.+++..+|+.+ .++.+|||.++|++.|+++++++++..|..+.+++ ++...|.+||..|++.|++
T Consensus 3 ~s~eqv~~aFr~l-A~~KpyVT~~dLr~~l~pe~aey~~~~Mp~~~~~~-~~~~~~~~DY~~f~~~l~g 69 (69)
T PF08726_consen 3 DSAEQVEEAFRAL-AGGKPYVTEEDLRRSLTPEQAEYCISRMPPYEGPD-GDAIPGAYDYESFTNSLFG 69 (69)
T ss_dssp STCHHHHHHHHHH-CTSSSCEEHHHHHHHS-CCCHHHHHCCSEC--SSS-----TTEEECHHHHCCCT-
T ss_pred CCHHHHHHHHHHH-HcCCCcccHHHHHHHcCcHHHHHHHHHCcccCCCC-cCCCCCCcCHHHHHHHHhC
Confidence 4668999999999 58999999999999999999999999999999888 7777899999999998875
No 45
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.38 E-value=9.9e-07 Score=75.32 Aligned_cols=69 Identities=25% Similarity=0.519 Sum_probs=61.1
Q ss_pred HHHHHHHHhhhhccc-cC-cCCCChHHHHHHHH---HcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1171 DALKEFSMMFKHFDK-DK-SGKLNQTEFKSCLR---ALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1171 ~~~~~~~~~F~~~D~-~~-~g~i~~~e~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
+.+..+-.+|..||. +| +|+|+..||+.++. .+|..+ +..++..++..+|.+++|.|+|.+|+.++..
T Consensus 7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~-------t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKL-------QDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCC-------CHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 456678899999998 67 89999999999996 368777 8899999999999999999999999999876
Q ss_pred h
Q psy6493 1246 K 1246 (1321)
Q Consensus 1246 ~ 1246 (1321)
+
T Consensus 80 l 80 (88)
T cd05029 80 L 80 (88)
T ss_pred H
Confidence 5
No 46
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.38 E-value=1.1e-06 Score=76.83 Aligned_cols=68 Identities=25% Similarity=0.431 Sum_probs=58.9
Q ss_pred HHHHHHHhhhhcc-ccCcC-CCChHHHHHHHHH-cCC----CCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1172 ALKEFSMMFKHFD-KDKSG-KLNQTEFKSCLRA-LGY----DLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1172 ~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-~~~----~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
.+..+..+|..|| .+++| .|+..+|+.+|+. +|. .+ +...+..++..+|.+++|.|+|.+|+.++.
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~-------s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~ 79 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQK-------DADAVDKIMKELDENGDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCC-------CHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 4567999999997 99999 4999999999985 543 34 678899999999999999999999999886
Q ss_pred hh
Q psy6493 1245 SK 1246 (1321)
Q Consensus 1245 ~~ 1246 (1321)
.+
T Consensus 80 ~~ 81 (92)
T cd05025 80 AL 81 (92)
T ss_pred HH
Confidence 65
No 47
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.36 E-value=1.2e-06 Score=76.18 Aligned_cols=73 Identities=22% Similarity=0.392 Sum_probs=58.3
Q ss_pred HHHHHHHHhhhhcc-ccCcC-CCChHHHHHHHHH-cCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1171 DALKEFSMMFKHFD-KDKSG-KLNQTEFKSCLRA-LGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1171 ~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
..+..+..+|..|| .|++| .|+..||+.++.. ++.... ...+...+..++..+|.+++|.|+|.||+.++..+
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~---~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLS---SQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcc---cccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45677899999999 78998 5999999999976 321110 00156789999999999999999999999998765
No 48
>PTZ00184 calmodulin; Provisional
Probab=98.35 E-value=2e-06 Score=84.70 Aligned_cols=98 Identities=17% Similarity=0.269 Sum_probs=82.8
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHcCC-CCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCC
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGY-DLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQS 1253 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 1253 (1321)
.+..+|..+|.+++|.|+..+|..++..... .. ....+..+|..+|.+++|.|+..+|..++... +...+
T Consensus 48 ~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~-------~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~--~~~~~ 118 (149)
T PTZ00184 48 ELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD-------SEEEIKEAFKVFDRDGNGFISAAELRHVMTNL--GEKLT 118 (149)
T ss_pred HHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc-------HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH--CCCCC
Confidence 5788899999999999999999998875422 22 45678899999999999999999999988654 24567
Q ss_pred HHHHHHHHHHHccCCCCCcCHHHHHhhC
Q psy6493 1254 SEEIENAFHAIAASDRPYVTKEELYANL 1281 (1321)
Q Consensus 1254 ~~~~~~~F~~~D~~~~G~I~~~el~~~l 1281 (1321)
...+..+|..+|.+++|.|+.++|...+
T Consensus 119 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 119 DEEVDEMIREADVDGDGQINYEEFVKMM 146 (149)
T ss_pred HHHHHHHHHhcCCCCCCcCcHHHHHHHH
Confidence 7889999999999999999999998754
No 49
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.35 E-value=1.1e-06 Score=77.10 Aligned_cols=68 Identities=22% Similarity=0.448 Sum_probs=59.3
Q ss_pred HHHHHHHhhhhccc-cC-cCCCChHHHHHHHHH-----cCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1172 ALKEFSMMFKHFDK-DK-SGKLNQTEFKSCLRA-----LGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1172 ~~~~~~~~F~~~D~-~~-~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
.+..+..+|..||. |+ +|.|+..+|+.+|.. +|..+ +...+..++..+|.+++|.|+|.+|+.++.
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~-------s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQK-------DPMAVDKIMKDLDQNRDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccc-------cHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 35668999999997 87 699999999999986 46666 788999999999999999999999999886
Q ss_pred hh
Q psy6493 1245 SK 1246 (1321)
Q Consensus 1245 ~~ 1246 (1321)
..
T Consensus 79 ~~ 80 (94)
T cd05031 79 GL 80 (94)
T ss_pred HH
Confidence 54
No 50
>KOG4240|consensus
Probab=98.35 E-value=0.0061 Score=73.94 Aligned_cols=341 Identities=16% Similarity=0.150 Sum_probs=219.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcCC-CCCCCHHHHHHHHHHHHHH
Q psy6493 479 SEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSE-DSGKDLASVQNLIKKHQLV 557 (1321)
Q Consensus 479 ~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~WL~~~e~~L~~~-~~~~d~~~~~~~l~~~~~l 557 (1321)
..+.|+..+..+..+-..+.--...+..++..+.+...+.....++..|+.+-...|... ..++++.........|..+
T Consensus 242 mve~vQ~~le~l~~~~q~~El~~d~~s~rl~~a~~l~~l~~~k~qv~~~~rng~smLt~~~~~~s~~~et~~Lq~~~~~f 321 (1025)
T KOG4240|consen 242 MVEAVQGLLESLEEEVQRLELPADVRSTRLEQASQLAKLLEDKNQVLALIRNGLSMLTQLRVLASDLSETSQLQREHRQF 321 (1025)
T ss_pred HHHHHHHHHHhHHHHHHhhcchhhchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhccCCCcCCccHHHHhhHhhh
Confidence 467788899999999888888888888999999999999999999999999999888654 4677777777788888888
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy6493 558 EADIQA-HDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKE 636 (1321)
Q Consensus 558 ~~ei~~-~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~~~~f~~~~~~~~~Wl~~ 636 (1321)
...+.. ....-..+..++..++...+++..+...++..+..+|..+...+..|.+.+..+..+ +........-|..
T Consensus 322 ~d~~e~k~~~~q~~~~~~a~~~~~~~h~~~~e~~~~le~~~t~~qql~~~~e~r~~~vaa~~~~---~~t~e~v~~iLe~ 398 (1025)
T KOG4240|consen 322 QDAQEVKTLLSQLQVQQKAFDLLQNKHQNRDESLEKLETLQTKWQQLMTAMEDRLKLVAAAVAF---YKTSEQVEPILED 398 (1025)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhchhhhHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHHH---hcCHHHHHHHHHh
Confidence 887777 334445566677777778888999999999999999999999999999999877774 4444433333433
Q ss_pred hhhhhcCCcCCCCHHHHHHHHHHhHHHHH--HHHhchHHHHHHHHHHHHhhhcCCCCchHH------------HHHHHHH
Q psy6493 637 KKLLVGSDDYGRDLTGVQNLKKKHKRLEA--ELASHQPAIQNVQETGEKLMDVSNLGVPEI------------EQRLKLL 702 (1321)
Q Consensus 637 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~--ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i------------~~~l~~l 702 (1321)
.+...... .+..+ ....+..+.. -+..+...+..+...|......++.....| .-....+
T Consensus 399 le~e~E~~-~g~al-----~~~~f~~l~a~~l~skh~~~~~~~l~~CTe~r~~ad~~~~ei~r~~i~~~~k~lk~~r~~~ 472 (1025)
T KOG4240|consen 399 LESEYERS-GGCAL-----LGAQFRSLHAALLISKHRLAKELFLKACTEARRNADVFLREIKRNRILDREKQLKLHRNLL 472 (1025)
T ss_pred cccccchh-hhhhh-----chhHHHHHhhhhhhhhhhhhhhhhhhhHHHHHhcCcHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 32222110 01111 0111111111 122234444555555555554444322222 2222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy6493 703 NQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCAD 782 (1321)
Q Consensus 703 ~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~ 782 (1321)
..+=......+......+..+....-|+..+.++..||...-...-.........+.......+..|..........+..
T Consensus 473 r~re~~~l~~~l~a~q~~d~cq~~~~~e~~~ke~e~~L~~~~ef~~~~~~s~~~~e~~e~~~~~~~~~~~~~~~~~~~~~ 552 (1025)
T KOG4240|consen 473 RQRENCDLESWLLAKQALDKCQSYVVAEASAKEAEEFLHTEGEFKLKELTSKSERESIELLDLFAKFKSPFKQTKTMVSL 552 (1025)
T ss_pred hccccCcHHHHHHHHhhhHhhhHHHHHHHHHHHHHHHHHhCcchhhhhcchhhhhhhccchhhhhhcCCcchhHHHHHHH
Confidence 33333333444455666666666777888999999999886665433222222223333344455555555556666666
Q ss_pred HHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 783 ICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMD 828 (1321)
Q Consensus 783 l~~~~~~L~~~~~~~~~~i~~~~~~l~~~~~~l~~~~~~r~~~Le~ 828 (1321)
+......+....+..+..|+..+......+.........|+.....
T Consensus 553 f~~~~~~f~~~~~~h~~~Iq~~v~~~e~~~~~~~~~~~~~~~sk~~ 598 (1025)
T KOG4240|consen 553 FIQLQDNFTELAHRHGREIQKCVERVEKEYRSFSRRMGKRCGSKEK 598 (1025)
T ss_pred HHHHhhhhhhhhhhhhhhHHhhcccchhccCCCCcccchhhhhHHH
Confidence 7777777776666666677777777777777666666655554443
No 51
>PRK04863 mukB cell division protein MukB; Provisional
Probab=98.33 E-value=0.041 Score=72.64 Aligned_cols=769 Identities=14% Similarity=0.128 Sum_probs=332.5
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHH------------HHHHHHHhhhc
Q psy6493 150 ANRLMQTHPETAEQTYAKQKEINEEWTQLTAKANTRKEKLLDSYD-LQRFLSDYRDL------------MSWINSMMGLV 216 (1321)
Q Consensus 150 ~~~L~~~~~~~~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~-~~~f~~~~~~l------------~~wl~~~e~~l 216 (1321)
+..++...+-+.+.+...+.++..+-..+...+.+-...+..... ...|......+ ..|..++....
T Consensus 426 ~~~~~~~~~~SdEeLe~~LenF~aklee~e~qL~elE~kL~~lea~leql~~~~~~l~~~~Gkv~~~~a~~~~~~~~~~~ 505 (1486)
T PRK04863 426 AKQLCGLPDLTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSEAWDVARELLRRL 505 (1486)
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHh
Confidence 444444445556778888888887777777777777777666654 55555444433 22222222221
Q ss_pred cCCcccCCHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHH---HHHH
Q psy6493 217 SSDELANDVTGAEALLERHQEHRTEIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWI---ARRM 293 (1321)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~~~l~~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~---~r~~ 293 (1321)
... ..-...+...-.++.+++..+...+. ...+......-.....++...+.......+.....+..... ++..
T Consensus 506 ~~~--~~~~~~~~~~~~~~~~l~~~~~~q~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (1486)
T PRK04863 506 REQ--RHLAEQLQQLRMRLSELEQRLRQQQR-AERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRM 582 (1486)
T ss_pred HHH--HHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 00011122222333344444433322 22333222222222233344555555555555555444333 2333
Q ss_pred HHHHHHH-H-HHHHHhHHHHHHHHHHHHhh--hccCC--CCCCHHHHH----HHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy6493 294 QLDQCLE-L-QLFYRDCEQAENWMSAREAF--LNAEE--VDSKTDNVE----ALIKKHEDFDKAINAHEEKIGALQTLAD 363 (1321)
Q Consensus 294 ~L~~~~~-~-~~f~~~~~~l~~wl~~~e~~--l~~~~--~~~~~~~~~----~~l~~~~~l~~~l~~~~~~~~~l~~~~~ 363 (1321)
.+.+-++ + ..+...-...-.|+...+.. |.... .-.+...+. ..+.+.+.+..........+..+.....
T Consensus 583 ~~r~~~~qL~~~i~~l~~~ap~W~~a~~al~~L~eq~g~~~~~~~~v~~~mq~~~~~~~~~~~~~~~~~~~~~~L~~~i~ 662 (1486)
T PRK04863 583 ALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQALDEEIE 662 (1486)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHhhHHHHHHHHHhcchhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333322 1 33333334445688864433 33221 122444333 3455666677777777778888888888
Q ss_pred HHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHH-HHHhHHHHHHHHH--------HHHHhhhh---
Q psy6493 364 QLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGES-QTLQQ-FSRDADEMENWIA--------EKLQLATE--- 430 (1321)
Q Consensus 364 ~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~-~~~~~-f~~~~~~l~~Wl~--------~~~~~~~~--- 430 (1321)
.+...+......+......+.--. |...+ ... ..... |-.-+.....||- +....+.+
T Consensus 663 ~l~~~~~g~~~~l~~~~~~~~Gvl--vsel~-------~~v~~~~~~~~~A~lg~~~~~iVv~d~~~A~~ai~~L~~~p~ 733 (1486)
T PRK04863 663 RLSQPGGSEDPRLNALAERFGGVL--LSEIY-------DDVSLEDAPYFSALYGPARHAIVVPDLSDAAEQLAGLEDCPE 733 (1486)
T ss_pred hhhccCCCccHHHHHHHHhcCCee--hhHhh-------hccCcchHHHHHHHHHhhhCeEEeCCHHHHHHHHHhccCCcc
Confidence 877655444444443311111000 11111 100 00000 1111222222221 11111111
Q ss_pred ---cccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 431 ---ESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGS-EEAVQARLASIADQWEFLTQKTTEKSL 506 (1321)
Q Consensus 431 ---~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~-~~~i~~~l~~l~~~w~~l~~~~~~r~~ 506 (1321)
-+-+||+.+.+-.-....+...|...-..... .+..-...|-. ...=...+..|...-+.+........-
T Consensus 734 d~~li~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------r~s~~p~~p~~gr~are~~~~~l~~~~~~~~~~~~~~~~ 807 (1486)
T PRK04863 734 DLYLIEGDPDSFDDSVFSVEELEKAVVVKIADRQW------RYSRFPEVPLFGRAAREKRIEQLRAEREELAERYATLSF 807 (1486)
T ss_pred ceeeecCChhHHhccCccHHHhcCCeeeeecchhh------hhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11245555444333333333333222211110 11000000100 222334555555555444443332221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhcCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy6493 507 KLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDL-ASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFD 585 (1321)
Q Consensus 507 ~L~~~~~~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~-~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~ 585 (1321)
. .+.++..+..+...+...- +.....|| ..+...-.+...+...+..+..........+..+...
T Consensus 808 ~------~~~~~r~~~~~~~~~~~~~----~~~f~~~pe~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---- 873 (1486)
T PRK04863 808 D------VQKLQRLHQAFSRFIGSHL----AVAFEADPEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEG---- 873 (1486)
T ss_pred h------HHHHHHHHHHHHHHHhhCc----chhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 1 2223333333333332210 11122333 3333333444444555544444433333333322111
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhhcCCcCCCCHHHHHHHHHHhHHHH
Q psy6493 586 ASSIQEKRQSINERYER-IKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLE 664 (1321)
Q Consensus 586 ~~~l~~~~~~l~~~~~~-l~~~~~~r~~~Le~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 664 (1321)
...+...+-.++-.++. +...+.+....+..+.....|.......+.-|......|... +.+.+.++...+..+...
T Consensus 874 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~y~~~~~~~L~qLE~~l~~L~~D--p~~~e~lr~e~~~~~~~~ 951 (1486)
T PRK04863 874 LSALNRLLPRLNLLADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQLEPIVSVLQSD--PEQFEQLKQDYQQAQQTQ 951 (1486)
T ss_pred HHHHHHhchhhhhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHHHHHH
Confidence 00011111111111111 333333333444444444445555444444444444444432 223333343333333333
Q ss_pred HHHHhchHHHHHHHHHHHHh--------hhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q psy6493 665 AELASHQPAIQNVQETGEKL--------MDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESL-TYQHFLAKVEE 735 (1321)
Q Consensus 665 ~ei~~~~~~~~~~~~~~~~L--------~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~-~~~~f~~~~~e 735 (1321)
..+...--.+..|......| +.....-.+.|+..+..+...+..+...+..-...+...- .+..+...+..
T Consensus 952 ~~~~~~~~~l~~~~~~~~~~~y~~~~~~l~~~~~~~~~Le~~Le~iE~~~~~areql~qaq~q~~q~~q~l~slksslq~ 1031 (1486)
T PRK04863 952 RDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDA 1031 (1486)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHhHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444333444444443333 2222223456888899999999988888888888777766 44677788888
Q ss_pred HHHHHHHHhhhhcCCCCCCCHHHH----------HHHHH----HHHHHHHHHHhhHHHHHHHHHhhhHhhhhcCCCchHH
Q psy6493 736 EEAWISEKQQLLSVEDYGDTMAAV----------QGLLK----KHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSI 801 (1321)
Q Consensus 736 l~~wl~~~e~~l~~~~~~~~~~~~----------~~~l~----~~~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~i 801 (1321)
...-+.+....|....++.+...- ...|. +...+...+...+..++.+......+- .+...+
T Consensus 1032 ~~e~L~E~eqe~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~re~EIe~L~kkL~~~~----~e~~~~ 1107 (1486)
T PRK04863 1032 KRQMLQELKQELQDLGVPADSGAEERARARRDELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLE----RDYHEM 1107 (1486)
T ss_pred HHHHHHHHHHHHHHcCCCCCccHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH
Confidence 888888888888876655433221 11221 122333333344444444443333322 234567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-HHHHHHHHHHHHHHHHHhHHhhhcccccCCCHHHHHHHHHhHHHHHHh
Q psy6493 802 TQRCQQLQLKLDNLMALATKRK--TKLMDNS-AYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAG 878 (1321)
Q Consensus 802 ~~~~~~l~~~~~~l~~~~~~r~--~~Le~~~-~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1321)
...+..++..|..+...+..-. .+|.... .+. ..+++.+-....-..|.. .+ .+-+.+...+.- ..+
T Consensus 1108 re~I~~aK~~W~~v~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~-a~-~~~~~~~~~~~~----~~~ 1177 (1486)
T PRK04863 1108 REQVVNAKAGWCAVLRLVKDNGVERRLHRRELAYL----SADELRSMSDKALGALRL-AV-ADNEHLRDVLRL----SED 1177 (1486)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhhHhhhhcc----CchhhHHHHHHHHHHHHH-hc-cCcHHHHHHHhh----ccC
Confidence 7888888888888888766521 2222111 111 012222211111111110 01 111112211111 111
Q ss_pred hhhhhhhhHHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q psy6493 879 LHAFEHEGIQNITTLKDQLVA---SNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKAS 955 (1321)
Q Consensus 879 l~~~~~~~~~~~~~~~~~l~~---~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f~~~~~ 955 (1321)
..+....+.-...+-..|-. .....+.........|......+...+..+...+.. ..+++...+...+.
T Consensus 1178 -~~~~e~~~~~~~~~~~~~r~r~r~di~~~~~p~et~e~Le~ei~rl~~~L~e~Er~L~~------s~eEVa~~l~~rI~ 1250 (1486)
T PRK04863 1178 -PKRPERKVQFYIAVYQHLRERIRQDIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAI------SSESVANIIRKTIQ 1250 (1486)
T ss_pred -CCchhHHHhHHHHHHHHHHHHHhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CHHHHHHHHHHHHH
Confidence 11111111111111111111 111112233445566666667777777776665542 23345678899999
Q ss_pred HHHhhHHhhhhhcCCCcC
Q psy6493 956 SFNSWFENAEEDLTDPVR 973 (1321)
Q Consensus 956 ~~~~wl~~~e~~l~~~~~ 973 (1321)
....|+..+...|...+.
T Consensus 1251 ~a~~~V~~mN~~L~~i~f 1268 (1486)
T PRK04863 1251 REQNRIRMLNQGLQNISF 1268 (1486)
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 999999999988887544
No 52
>KOG0994|consensus
Probab=98.33 E-value=0.02 Score=68.79 Aligned_cols=122 Identities=16% Similarity=0.212 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HH------HHHHhHHHHHHHHHHhhhhhcCCcCCCCHHHHHHHHHHhHHHHHHH
Q psy6493 595 SINERYERIKNLAAHRQARLNEANT-LH------QFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAEL 667 (1321)
Q Consensus 595 ~l~~~~~~l~~~~~~r~~~Le~~~~-~~------~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ei 667 (1321)
..-..|+.+.+.+..|-.+|..... +. -|...+.++..-|.+....|+.. +.+.+++..+-...+.|+..|
T Consensus 1164 ~CF~~WD~il~~L~~rt~rl~~~A~~l~~tGv~gay~s~f~~me~kl~~ir~il~~~--svs~~~i~~l~~~~~~lr~~l 1241 (1758)
T KOG0994|consen 1164 ECFQTWDAILQELALRTHRLINRAKELKQTGVLGAYASRFLDMEEKLEEIRAILSAP--SVSAEDIAQLASATESLRRQL 1241 (1758)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhHHHHHHHHHHHHHHHhcCC--CccHHHHHHHHHHHHHHHHHH
Confidence 4556788877777777766654433 33 36777888888888888888664 345677788888888888888
Q ss_pred HhchHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 668 ASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDE 722 (1321)
Q Consensus 668 ~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~ 722 (1321)
......+..+......+....+. -...|+.|+.....|.....+....++.
T Consensus 1242 ~~~~e~L~~~E~~Lsdi~~~~~~----a~~~LesLq~~~~~l~~~~keL~e~~~~ 1292 (1758)
T KOG0994|consen 1242 QALTEDLPQEEETLSDITNSLPL----AGKDLESLQREFNGLLTTYKELREQLEK 1292 (1758)
T ss_pred HHHHhhhhhhhhhhhhhhhccch----hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777766665554444332221 2344556666666665555555555443
No 53
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.33 E-value=1.3e-06 Score=75.85 Aligned_cols=74 Identities=23% Similarity=0.394 Sum_probs=61.5
Q ss_pred HHHHHHHHHhhhhccc--cCcCCCChHHHHHHHHH-cCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1170 EDALKEFSMMFKHFDK--DKSGKLNQTEFKSCLRA-LGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1170 ~~~~~~~~~~F~~~D~--~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
++++..++.+|..||. +++|.|+..+|..++.. +|..++ ...+...+..++..+|.+++|.|+|.+|+.++...
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~---~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLK---NQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhcc---CCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4678889999999999 89999999999999976 554330 00157889999999999999999999999988654
No 54
>KOG0994|consensus
Probab=98.32 E-value=0.02 Score=68.67 Aligned_cols=118 Identities=15% Similarity=0.213 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHH-------HHHHHHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHHHHHHHHHHhhcc
Q psy6493 174 EWTQLTAKANTRKEKLLDSYD-------LQRFLSDYRDLMSWINSMMGLVSSDELANDVTGAEALLERHQEHRTEIDART 246 (1321)
Q Consensus 174 ~w~~l~~~~~~r~~~L~~~~~-------~~~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~el~~~~ 246 (1321)
.|+.+.+.+..|..+|..... +..|.+.+.++...|.++...|... ..+...+...-.....++..|....
T Consensus 1168 ~WD~il~~L~~rt~rl~~~A~~l~~tGv~gay~s~f~~me~kl~~ir~il~~~--svs~~~i~~l~~~~~~lr~~l~~~~ 1245 (1758)
T KOG0994|consen 1168 TWDAILQELALRTHRLINRAKELKQTGVLGAYASRFLDMEEKLEEIRAILSAP--SVSAEDIAQLASATESLRRQLQALT 1245 (1758)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhHHHHHHHHHHHHHHHhcCC--CccHHHHHHHHHHHHHHHHHHHHHH
Confidence 588888777777777655432 4579999999999999999988664 3445566666666677777776666
Q ss_pred chHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 247 GTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQ 297 (1321)
Q Consensus 247 ~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~ 297 (1321)
..+-.+......+.++. ......|+.|+.....|.....+...+++.
T Consensus 1246 e~L~~~E~~Lsdi~~~~----~~a~~~LesLq~~~~~l~~~~keL~e~~~~ 1292 (1758)
T KOG0994|consen 1246 EDLPQEEETLSDITNSL----PLAGKDLESLQREFNGLLTTYKELREQLEK 1292 (1758)
T ss_pred hhhhhhhhhhhhhhhcc----chhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555444443332 233566777777777777777766666554
No 55
>KOG2643|consensus
Probab=98.32 E-value=1.2e-06 Score=92.90 Aligned_cols=99 Identities=20% Similarity=0.413 Sum_probs=68.0
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHH------cCCCC-CcccCCCC-chHHH--HHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRA------LGYDL-PMVEEGQP-DPEFE--AILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~------~~~~~-~~~~~~~~-~~~~~--~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
.|+-+|..||.||+|.|+.+||.....- +|..- ....+..+ ...+. -..-.+..++++++++++|..++.
T Consensus 234 ~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e 313 (489)
T KOG2643|consen 234 NFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQE 313 (489)
T ss_pred cceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHHH
Confidence 3788999999999999999999776521 22200 00000000 00111 133457889999999999999997
Q ss_pred hhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHh
Q psy6493 1245 SKETENVQSSEEIENAFHAIAASDRPYVTKEELYA 1279 (1321)
Q Consensus 1245 ~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~ 1279 (1321)
.+. .+-++.-|..+|+..+|.|+..+|..
T Consensus 314 ~Lq------~Eil~lEF~~~~~~~~g~Ise~DFA~ 342 (489)
T KOG2643|consen 314 NLQ------EEILELEFERFDKGDSGAISEVDFAE 342 (489)
T ss_pred HHH------HHHHHHHHHHhCcccccccCHHHHHH
Confidence 764 25567778889988888999888887
No 56
>KOG0041|consensus
Probab=98.30 E-value=2e-06 Score=80.53 Aligned_cols=106 Identities=19% Similarity=0.380 Sum_probs=83.3
Q ss_pred CCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1167 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1167 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
.++..+|..+..+|..||.+.||+|+..|++.+|.++|.+- +.--++.++..+|.|.+|+|+|.+|+-++...
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQ-------THL~lK~mikeVded~dgklSfreflLIfrka 164 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQ-------THLGLKNMIKEVDEDFDGKLSFREFLLIFRKA 164 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCch-------hhHHHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence 34567999999999999999999999999999999999886 77778999999999999999999999887654
Q ss_pred hhcccCCHHHHHHH--HHHHccCCCCCcCHHHHHh
Q psy6493 1247 ETENVQSSEEIENA--FHAIAASDRPYVTKEELYA 1279 (1321)
Q Consensus 1247 ~~~~~~~~~~~~~~--F~~~D~~~~G~I~~~el~~ 1279 (1321)
..........+... ...+|....|.-....|-.
T Consensus 165 aagEL~~ds~~~~LAr~~eVDVskeGV~GAknFFe 199 (244)
T KOG0041|consen 165 AAGELQEDSGLLRLARLSEVDVSKEGVSGAKNFFE 199 (244)
T ss_pred hccccccchHHHHHHHhcccchhhhhhhhHHHHHH
Confidence 33222222222222 3347888888888777766
No 57
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.29 E-value=5.7e-07 Score=76.41 Aligned_cols=61 Identities=21% Similarity=0.267 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcc-CCCCCcCHHHHHhhCCHh-h--H-H-HHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1255 EEIENAFHAIAA-SDRPYVTKEELYANLTKE-M--A-D-YCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1255 ~~~~~~F~~~D~-~~~G~I~~~el~~~l~~~-~--~-~-~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
..+..+|+.||+ +++|+|+..||+..|+.+ + + + ..+..|++.+|.| +| |.|+|+||+.+|.
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d-~D---G~I~F~EF~~l~~ 74 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVN-QD---SKLSFEEFWELIG 74 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCC-CC---CCCcHHHHHHHHH
Confidence 457889999999 999999999999877541 1 1 1 3455666788999 88 9999999988875
No 58
>KOG4240|consensus
Probab=98.27 E-value=0.00031 Score=84.67 Aligned_cols=343 Identities=14% Similarity=0.128 Sum_probs=219.6
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhccCC-CCCCHHHHHHHHHHHH
Q psy6493 264 HYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLELQLFYRDCEQAENWMSAREAFLNAEE-VDSKTDNVEALIKKHE 342 (1321)
Q Consensus 264 ~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~~~~-~~~~~~~~~~~l~~~~ 342 (1321)
.+....|+..+..++.+-..+.-....+...+..+.++..+..+.+++..|+.+....|.... ++++..........|.
T Consensus 240 ~~mve~vQ~~le~l~~~~q~~El~~d~~s~rl~~a~~l~~l~~~k~qv~~~~rng~smLt~~~~~~s~~~et~~Lq~~~~ 319 (1025)
T KOG4240|consen 240 RDMVEAVQGLLESLEEEVQRLELPADVRSTRLEQASQLAKLLEDKNQVLALIRNGLSMLTQLRVLASDLSETSQLQREHR 319 (1025)
T ss_pred hHHHHHHHHHHHhHHHHHHhhcchhhchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhccCCCcCCccHHHHhhHh
Confidence 345577999999999999999999999999999999999999999999999999888887765 6677888888888999
Q ss_pred HHHHHHHHhH-HHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHH
Q psy6493 343 DFDKAINAHE-EKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWI 421 (1321)
Q Consensus 343 ~l~~~l~~~~-~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~Wl 421 (1321)
.|........ ..-......+..++.+.+++....-..+..++++|..+...+..|.+.+..+.. |+.....+..-|
T Consensus 320 ~f~d~~e~k~~~~q~~~~~~a~~~~~~~h~~~~e~~~~le~~~t~~qql~~~~e~r~~~vaa~~~---~~~t~e~v~~iL 396 (1025)
T KOG4240|consen 320 QFQDAQEVKTLLSQLQVQQKAFDLLQNKHQNRDESLEKLETLQTKWQQLMTAMEDRLKLVAAAVA---FYKTSEQVEPIL 396 (1025)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhchhhhHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHH---HhcCHHHHHHHH
Confidence 9888777622 222334445555666778888999999999999999999999999999888776 777777665555
Q ss_pred HHHHHhhhhcccCCchhHHHHHHHHHHHHH--HHHhcHHHHHHHHHHhHHhHhccCC----------CCCHHHHHHHHHH
Q psy6493 422 AEKLQLATEESYKDPANIQSKHQKHQAFEA--ELAANADRIQSVLAMGQNLIDKRQC----------VGSEEAVQARLAS 489 (1321)
Q Consensus 422 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~--el~~~~~~~~~l~~~~~~l~~~~~~----------~~~~~~i~~~l~~ 489 (1321)
.+.+..... . +-......+. ..+.. -+..+....+.+...|.......+. ......+.-....
T Consensus 397 e~le~e~E~-~-~g~al~~~~f---~~l~a~~l~skh~~~~~~~l~~CTe~r~~ad~~~~ei~r~~i~~~~k~lk~~r~~ 471 (1025)
T KOG4240|consen 397 EDLESEYER-S-GGCALLGAQF---RSLHAALLISKHRLAKELFLKACTEARRNADVFLREIKRNRILDREKQLKLHRNL 471 (1025)
T ss_pred Hhcccccch-h-hhhhhchhHH---HHHhhhhhhhhhhhhhhhhhhhHHHHHhcCcHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 543221111 0 0000000000 00111 1122222333344444333332210 0011223333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 490 IADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEV-ESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRI 568 (1321)
Q Consensus 490 l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~WL~~~-e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei~~~~~~v 568 (1321)
+..+=......+....+.+..+.....+...+.++..||... +-++..... ....+.....+.+-.|..........+
T Consensus 472 ~r~re~~~l~~~l~a~q~~d~cq~~~~~e~~~ke~e~~L~~~~ef~~~~~~s-~~~~e~~e~~~~~~~~~~~~~~~~~~~ 550 (1025)
T KOG4240|consen 472 LRQRENCDLESWLLAKQALDKCQSYVVAEASAKEAEEFLHTEGEFKLKELTS-KSERESIELLDLFAKFKSPFKQTKTMV 550 (1025)
T ss_pred HhccccCcHHHHHHHHhhhHhhhHHHHHHHHHHHHHHHHHhCcchhhhhcch-hhhhhhccchhhhhhcCCcchhHHHHH
Confidence 444433444455556666676666778899999999999876 444433222 333333334445555666666666667
Q ss_pred HHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 569 KDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLN 615 (1321)
Q Consensus 569 ~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le 615 (1321)
..+......+....+--+..|...+......|.........++....
T Consensus 551 ~~f~~~~~~f~~~~~~h~~~Iq~~v~~~e~~~~~~~~~~~~~~~sk~ 597 (1025)
T KOG4240|consen 551 SLFIQLQDNFTELAHRHGREIQKCVERVEKEYRSFSRRMGKRCGSKE 597 (1025)
T ss_pred HHHHHHhhhhhhhhhhhhhhHHhhcccchhccCCCCcccchhhhhHH
Confidence 77777777776665555666777777777777777666666555544
No 59
>KOG0161|consensus
Probab=98.27 E-value=0.057 Score=71.68 Aligned_cols=51 Identities=18% Similarity=0.306 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhh
Q psy6493 483 VQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLL 535 (1321)
Q Consensus 483 i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~WL~~~e~~L 535 (1321)
+...+..+....+.|.+.+.+-....... .........++..|....+..+
T Consensus 1320 l~~~l~~l~~e~~~l~e~leee~e~~~~l--~r~lsk~~~e~~~~~~k~e~~~ 1370 (1930)
T KOG0161|consen 1320 LENALRQLEHELDLLREQLEEEQEAKNEL--ERKLSKANAELAQWKKKFEEEV 1370 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455554444444443322222211 3445556667777777776554
No 60
>KOG0028|consensus
Probab=98.24 E-value=9.9e-06 Score=73.58 Aligned_cols=127 Identities=23% Similarity=0.399 Sum_probs=89.4
Q ss_pred hcccccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHHhhcccccCCchhHhHHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy6493 1083 MEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQA 1162 (1321)
Q Consensus 1083 ~~~~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 1162 (1321)
+++.+.+ ...+|.-.+++.+-+.+. .++...+.+..-...+ .+.+. +++..+......
T Consensus 44 ~~~~g~i-----D~~EL~vAmralGFE~~k-~ei~kll~d~dk~~~g-----~i~fe---~f~~~mt~k~~e-------- 101 (172)
T KOG0028|consen 44 PDMAGKI-----DVEELKVAMRALGFEPKK-EEILKLLADVDKEGSG-----KITFE---DFRRVMTVKLGE-------- 101 (172)
T ss_pred cCCCCcc-----cHHHHHHHHHHcCCCcch-HHHHHHHHhhhhccCc-----eechH---HHHHHHHHHHhc--------
Confidence 3446666 456666777777777665 5555444443111112 22222 232333332222
Q ss_pred hhhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHH
Q psy6493 1163 RNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAF 1242 (1321)
Q Consensus 1163 ~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~ 1242 (1321)
.....++..+|+.||.|++|.|++.+|+.+...+|.++ ++.++..++..+|.+++|.|+-++|..+
T Consensus 102 -------~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenl-------tD~El~eMIeEAd~d~dgevneeEF~~i 167 (172)
T KOG0028|consen 102 -------RDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENL-------TDEELMEMIEEADRDGDGEVNEEEFIRI 167 (172)
T ss_pred -------cCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccc-------cHHHHHHHHHHhcccccccccHHHHHHH
Confidence 12456789999999999999999999999999999999 8999999999999999999999999998
Q ss_pred Hhh
Q psy6493 1243 MIS 1245 (1321)
Q Consensus 1243 ~~~ 1245 (1321)
|..
T Consensus 168 mk~ 170 (172)
T KOG0028|consen 168 MKK 170 (172)
T ss_pred Hhc
Confidence 853
No 61
>KOG4674|consensus
Probab=98.19 E-value=0.068 Score=69.55 Aligned_cols=79 Identities=14% Similarity=0.225 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCC----CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 327 VDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYA----AKPIDDKRKQVLDRWRLLKEALIEKRSRLG 402 (1321)
Q Consensus 327 ~~~~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~----~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~ 402 (1321)
.+.+-.-+...|-.+..+..-......-+..+...++.+-...... ...+...+..+..+...|...+.+....+.
T Consensus 517 es~S~~iIse~Lv~F~nI~eLqekN~eLL~~vR~Lae~lE~~E~~~~~~~~~~~k~~~~~a~e~i~~L~~~l~e~~~~i~ 596 (1822)
T KOG4674|consen 517 ESDSEEIISERLVEFSNINELQEKNVELLNAVRELAEKLEAAEKTQDKTLQNILKETINEASEKIAELEKELEEQEQRIE 596 (1822)
T ss_pred CccHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446677888888899988888888888888888888875433221 122334444555555555555554444444
Q ss_pred hhH
Q psy6493 403 ESQ 405 (1321)
Q Consensus 403 ~~~ 405 (1321)
..+
T Consensus 597 sLl 599 (1822)
T KOG4674|consen 597 SLL 599 (1822)
T ss_pred HHH
Confidence 433
No 62
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.17 E-value=2.7e-06 Score=65.77 Aligned_cols=52 Identities=31% Similarity=0.636 Sum_probs=48.1
Q ss_pred CcCCCChHHHHHHHHHcCCC-CCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1187 KSGKLNQTEFKSCLRALGYD-LPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1187 ~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
.+|.|+..+|+.+|..+|.. + +..++..+|..+|.+++|.|+|.||+.++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~-------s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDL-------SEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSS-------CHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCC-------CHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 37999999999999888988 8 8899999999999999999999999998853
No 63
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.17 E-value=3.5e-06 Score=69.10 Aligned_cols=61 Identities=26% Similarity=0.469 Sum_probs=54.5
Q ss_pred HHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1177 SMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1177 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
+.+|..+|++++|.|+..++..++..+|. +...+..++..+|.+++|.|+|.+|+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~---------~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL---------PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC---------CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 56899999999999999999999998875 35678999999999999999999999988543
No 64
>PF14658 EF-hand_9: EF-hand domain
Probab=98.13 E-value=4.9e-06 Score=64.14 Aligned_cols=61 Identities=25% Similarity=0.537 Sum_probs=56.7
Q ss_pred HhhhhccccCcCCCChHHHHHHHHHcCC-CCCcccCCCCchHHHHHHHhcCCCCC-ccccHHHHHHHHhh
Q psy6493 1178 MMFKHFDKDKSGKLNQTEFKSCLRALGY-DLPMVEEGQPDPEFEAILDLVDPNRD-GHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1178 ~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~-g~i~~~ef~~~~~~ 1245 (1321)
.+|..||.++.|.|...++..+|+.+|. .| ++..++.+.+.+|+++. |.|+|+.|...|..
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p-------~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSP-------EESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCC-------cHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 3699999999999999999999999998 77 88999999999999998 99999999999853
No 65
>KOG0034|consensus
Probab=98.13 E-value=1.1e-05 Score=79.28 Aligned_cols=103 Identities=18% Similarity=0.284 Sum_probs=80.7
Q ss_pred HHHhhhhccccCcCC-CChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccC-C
Q psy6493 1176 FSMMFKHFDKDKSGK-LNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQ-S 1253 (1321)
Q Consensus 1176 ~~~~F~~~D~~~~g~-i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~-~ 1253 (1321)
...+|+.|+.+++|. |+..+|...+..+-.... ....++-.|..||.+++|.|+.+++..++..+...... .
T Consensus 68 ~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~------~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~ 141 (187)
T KOG0034|consen 68 ADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKAS------KREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMS 141 (187)
T ss_pred HHHHHHHHhccCCCCccCHHHHHHHHhhhcCCcc------HHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcch
Confidence 345788889888888 999999999877654431 23478889999999999999999999998776532222 1
Q ss_pred H----HHHHHHHHHHccCCCCCcCHHHHHhhCCHh
Q psy6493 1254 S----EEIENAFHAIAASDRPYVTKEELYANLTKE 1284 (1321)
Q Consensus 1254 ~----~~~~~~F~~~D~~~~G~I~~~el~~~l~~~ 1284 (1321)
. .-+...|..+|.|+||+|+.+||..++...
T Consensus 142 ~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 142 DEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 2 235678999999999999999999977544
No 66
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.11 E-value=9.6e-06 Score=69.39 Aligned_cols=74 Identities=19% Similarity=0.360 Sum_probs=57.9
Q ss_pred HHHHHHHHhhhh-ccccCcC-CCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1171 DALKEFSMMFKH-FDKDKSG-KLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1171 ~~~~~~~~~F~~-~D~~~~g-~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
..+..+..+|.. +|.+++| .|+..||+.++.....+.. ....+...+..++..+|.|++|.|+|.||+.++..+
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~--~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFT--KNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhh--cCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 456778999999 7788876 9999999999977532110 000145789999999999999999999999988665
No 67
>KOG4251|consensus
Probab=98.10 E-value=3.9e-06 Score=80.93 Aligned_cols=138 Identities=21% Similarity=0.275 Sum_probs=94.9
Q ss_pred HHHHHhhhhccccCcCCCChHHHHHHHHH-cCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHH-HHhhhhh---
Q psy6493 1174 KEFSMMFKHFDKDKSGKLNQTEFKSCLRA-LGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMA-FMISKET--- 1248 (1321)
Q Consensus 1174 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~-~~~~~~~--- 1248 (1321)
..+..+|...|.|.+|+|+..+++..+.. ....+.. +.++..-.|..+|++++|.|++++|.- |+.....
T Consensus 101 rklmviFsKvDVNtDrkisAkEmqrwImektaEHfqe-----ameeSkthFraVDpdgDGhvsWdEykvkFlaskghsek 175 (362)
T KOG4251|consen 101 RKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQE-----AMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEK 175 (362)
T ss_pred HHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHH-----HHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchH
Confidence 56888999999999999999999887643 2211100 233445678899999999999999964 4433211
Q ss_pred --------cccCCHHHHHHHHHHHccCCCCCc---------CHHHHHhhCCHhh----HHHHHHcCCCCCCCCCCCCCCC
Q psy6493 1249 --------ENVQSSEEIENAFHAIAASDRPYV---------TKEELYANLTKEM----ADYCVERMKPYVDPKTERGIPG 1307 (1321)
Q Consensus 1249 --------~~~~~~~~~~~~F~~~D~~~~G~I---------~~~el~~~l~~~~----~~~~~~~~~~~~d~~~~d~~~g 1307 (1321)
+.....++=...|..-+++..|.. |..||..+|.|+. +.+++..+.+.+|.| || .
T Consensus 176 evadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqd-gD---k 251 (362)
T KOG4251|consen 176 EVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQD-GD---K 251 (362)
T ss_pred HHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccC-CC---e
Confidence 011111112233444445555554 4599999998763 567788888899999 99 9
Q ss_pred CcchHHHHHhhhc
Q psy6493 1308 ALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1308 ~i~~~eF~~~~~~ 1320 (1321)
.++.++|++...|
T Consensus 252 qlSvpeFislpvG 264 (362)
T KOG4251|consen 252 QLSVPEFISLPVG 264 (362)
T ss_pred eecchhhhcCCCc
Confidence 9999999987765
No 68
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.06 E-value=3.2e-05 Score=69.53 Aligned_cols=64 Identities=22% Similarity=0.366 Sum_probs=55.3
Q ss_pred CHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHH
Q psy6493 1169 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1243 (1321)
Q Consensus 1169 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 1243 (1321)
.+.....+.-.|..+|.|++|.|+..|+..+. ..+ ....+..+|..+|.+++|.||++||..++
T Consensus 43 ~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~-------~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 43 YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR----LDP-------NEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH----ccc-------hHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 45677789999999999999999999999876 233 45678889999999999999999999988
No 69
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.02 E-value=1.1e-05 Score=65.31 Aligned_cols=61 Identities=31% Similarity=0.678 Sum_probs=56.0
Q ss_pred HHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHH
Q psy6493 1176 FSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1243 (1321)
Q Consensus 1176 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 1243 (1321)
+..+|..+|.+++|.|+..+|..++..++..+ +...+..++..+|.+++|.|+|.+|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGL-------SEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCC-------CHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 56789999999999999999999999999887 78889999999999999999999998865
No 70
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.02 E-value=3.9e-06 Score=73.01 Aligned_cols=61 Identities=20% Similarity=0.313 Sum_probs=37.7
Q ss_pred HHHHHHHHHHc-cCCCC-CcCHHHHHhhCCHh--------hHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1255 EEIENAFHAIA-ASDRP-YVTKEELYANLTKE--------MADYCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1255 ~~~~~~F~~~D-~~~~G-~I~~~el~~~l~~~--------~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
..+..+|..|| +||+| +|+..||+..|... ..+..+..|++.+|.| +| |.|+|.+|+.+|.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n-~d---G~Idf~EF~~l~~ 80 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSN-KD---NEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCC-CC---CCCCHHHHHHHHH
Confidence 34566777777 56777 37777777766321 1122344455566777 76 7777777777664
No 71
>KOG0031|consensus
Probab=98.01 E-value=3.8e-05 Score=69.19 Aligned_cols=108 Identities=18% Similarity=0.302 Sum_probs=82.5
Q ss_pred HHHhhhhhHHHHHHhhHHHHHhhcccccCCchhHhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcCCCHHHHHHHHHhhh
Q psy6493 1102 EVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSMMFK 1181 (1321)
Q Consensus 1102 ei~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ 1181 (1321)
-+.+++..+.. ..+..++.++ ++...+| -+|...+.++.. ..+ ...+..+|.
T Consensus 57 ~~aSlGk~~~d-~elDaM~~Ea----~gPINft--------~FLTmfGekL~g-------------tdp--e~~I~~AF~ 108 (171)
T KOG0031|consen 57 MLASLGKIASD-EELDAMMKEA----PGPINFT--------VFLTMFGEKLNG-------------TDP--EEVILNAFK 108 (171)
T ss_pred HHHHcCCCCCH-HHHHHHHHhC----CCCeeHH--------HHHHHHHHHhcC-------------CCH--HHHHHHHHH
Confidence 34444444444 5666677665 2223343 555666665533 223 456899999
Q ss_pred hccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1182 HFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1182 ~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
.||.+++|.|+...|+.+|...|-.. +.+++..++..+-.+..|.|+|..|+.++.
T Consensus 109 ~FD~~~~G~I~~d~lre~Ltt~gDr~-------~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 109 TFDDEGSGKIDEDYLRELLTTMGDRF-------TDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred hcCccCCCccCHHHHHHHHHHhcccC-------CHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 99999999999999999999999988 899999999999999999999999999885
No 72
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=97.96 E-value=5.3e-06 Score=70.89 Aligned_cols=61 Identities=18% Similarity=0.266 Sum_probs=40.6
Q ss_pred HHHHHHHHHHc-cCCCC-CcCHHHHHhhCCH-----hh---HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1255 EEIENAFHAIA-ASDRP-YVTKEELYANLTK-----EM---ADYCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1255 ~~~~~~F~~~D-~~~~G-~I~~~el~~~l~~-----~~---~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
..+..+|+.|| ++|+| +|+.++|+..|.. .+ -+..+..+++.+|+| +| |+|+|.+|+.++.
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n-~d---G~v~f~eF~~li~ 78 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD-GD---GECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCC-CC---CcCcHHHHHHHHH
Confidence 45677888887 67888 4888888876643 11 122244455567777 77 8888888887664
No 73
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.83 E-value=2.9e-05 Score=66.38 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=34.7
Q ss_pred HHHHHHHHHcc-CC-CCCcCHHHHHhhCCHh---h---HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1256 EIENAFHAIAA-SD-RPYVTKEELYANLTKE---M---ADYCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1256 ~~~~~F~~~D~-~~-~G~I~~~el~~~l~~~---~---~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
.+..+|..||. +| +|+|+.+||+..|+.. + ....+..|++.+|.| ++ |+|+|.+|+.+|.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d-~d---G~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRN-KD---QEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CC---CCCcHHHHHHHHH
Confidence 45566777765 45 6677777777755310 0 122233344456666 66 7777777776664
No 74
>KOG2562|consensus
Probab=97.83 E-value=6.4e-05 Score=81.05 Aligned_cols=133 Identities=14% Similarity=0.270 Sum_probs=95.8
Q ss_pred CHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHh----cCCCCCccccHHHHHHHHh
Q psy6493 1169 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDL----VDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1169 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~~g~i~~~ef~~~~~ 1244 (1321)
+-+.-..+...|-.+|+|++|.|+.+++...-...+ +...+..+|.. .-...+|+++|++|+.++.
T Consensus 273 S~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~tl----------t~~ivdRIFs~v~r~~~~~~eGrmdykdFv~Fil 342 (493)
T KOG2562|consen 273 SYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHTL----------TERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFIL 342 (493)
T ss_pred eHHHHHHHHHHHhhhccccccccCHHHHHHHhccch----------hhHHHHHHHhhccccceeeecCcccHHHHHHHHH
Confidence 334444455568889999999999999876543322 44567788872 3345689999999999987
Q ss_pred hhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCC----------Hh--hHHHHHHcCCCCCCCCCCCCCCCCcchH
Q psy6493 1245 SKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLT----------KE--MADYCVERMKPYVDPKTERGIPGALDYI 1312 (1321)
Q Consensus 1245 ~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~----------~~--~~~~~~~~~~~~~d~~~~d~~~g~i~~~ 1312 (1321)
... +..+...++..|+.+|.+|+|+|+..|++.+.. .+ -++.++..|+..+.+. .. |+|+..
T Consensus 343 A~e--~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~-~~---~kItLq 416 (493)
T KOG2562|consen 343 AEE--DKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPE-DE---NKITLQ 416 (493)
T ss_pred Hhc--cCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCcc-CC---CceeHH
Confidence 653 566777899999999999999999999988432 11 1344555555445555 45 899999
Q ss_pred HHHHh
Q psy6493 1313 EFTRT 1317 (1321)
Q Consensus 1313 eF~~~ 1317 (1321)
+|...
T Consensus 417 Dlk~s 421 (493)
T KOG2562|consen 417 DLKGS 421 (493)
T ss_pred HHhhc
Confidence 98764
No 75
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.82 E-value=1.8e-05 Score=71.03 Aligned_cols=59 Identities=15% Similarity=0.153 Sum_probs=26.6
Q ss_pred chHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhh
Q psy6493 1216 DPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYAN 1280 (1321)
Q Consensus 1216 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~ 1280 (1321)
...+...|..+|.|++|.|+..|+..+. + ......+...|..+|.|++|+||.+||...
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l----~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~c 105 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR--L----DPNEHCIKPFFESCDLDKDGSISLDEWCYC 105 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH--c----cchHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 3344444445555555555555554433 1 112233444444455555555555554443
No 76
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.80 E-value=5.6e-05 Score=65.04 Aligned_cols=73 Identities=22% Similarity=0.443 Sum_probs=57.9
Q ss_pred HHHHHHHHhhhhcccc--CcCCCChHHHHHHHH-HcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1171 DALKEFSMMFKHFDKD--KSGKLNQTEFKSCLR-ALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1171 ~~~~~~~~~F~~~D~~--~~g~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
..+..+...|..|+.. ++|.|+..+|+.+|. .+|..++ ...+...+..+|..+|.+++|.|+|.+|+.++...
T Consensus 5 ~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t---~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 5 KAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLK---KEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhc---cCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3456788899999865 479999999999996 5554440 00127889999999999999999999999988654
No 77
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.79 E-value=3.6e-05 Score=67.36 Aligned_cols=61 Identities=26% Similarity=0.389 Sum_probs=35.3
Q ss_pred HHHHHHHHHHc-cCCCCC-cCHHHHHhhCCH-hh-------HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1255 EEIENAFHAIA-ASDRPY-VTKEELYANLTK-EM-------ADYCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1255 ~~~~~~F~~~D-~~~~G~-I~~~el~~~l~~-~~-------~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
+.++.+|..|| .+|+|+ |+..||+..|.. .+ ....+..|+..+|++ ++ |.|+|.+|+.++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d-~~---G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN-GD---GEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC-CC---CcCcHHHHHHHHH
Confidence 45666777775 677773 777777766532 11 122333444456666 66 7777777766553
No 78
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=97.78 E-value=0.19 Score=60.86 Aligned_cols=188 Identities=12% Similarity=0.174 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHH
Q psy6493 554 HQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANT-LHQFFRDIADEES 632 (1321)
Q Consensus 554 ~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~-~~~f~~~~~~~~~ 632 (1321)
.+.+..++......+..+...... ....-+.+...+..+..+...+...-......+..... -......+..+..
T Consensus 350 ~~~lekeL~~Le~~~~~~~~~i~~----~~~~ysel~e~leel~e~leeie~eq~ei~e~l~~Lrk~E~eAr~kL~~~~~ 425 (569)
T PRK04778 350 VRQLEKQLESLEKQYDEITERIAE----QEIAYSELQEELEEILKQLEEIEKEQEKLSEMLQGLRKDELEAREKLERYRN 425 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555544444443332221 12224456666666666666655555555444444333 2223333444444
Q ss_pred HHHHhhhhhcCCcCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHH
Q psy6493 633 WIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQL 712 (1321)
Q Consensus 633 Wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~l~~~ 712 (1321)
-+......+....+|+-|......+. ....++. .....|-. +|.+...|...+..+..++..|...
T Consensus 426 ~L~~ikr~l~k~~lpgip~~y~~~~~---~~~~~i~----------~l~~~L~~-g~VNm~ai~~e~~e~~~~~~~L~~q 491 (569)
T PRK04778 426 KLHEIKRYLEKSNLPGLPEDYLEMFF---EVSDEIE----------ALAEELEE-KPINMEAVNRLLEEATEDVETLEEE 491 (569)
T ss_pred HHHHHHHHHHHcCCCCCcHHHHHHHH---HHHHHHH----------HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45455555555556666654433332 2222222 23334444 6777788888889999998888877
Q ss_pred HHHHHHH---HHHHHHH-HHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHH
Q psy6493 713 AANRGQK---LDESLTY-QHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAV 759 (1321)
Q Consensus 713 ~~~r~~~---L~~~~~~-~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~ 759 (1321)
..+-... ++..++. .+|.....++..-+..++..+...++...++.+
T Consensus 492 ~~dL~~~a~~lE~~Iqy~nRfr~~~~~V~~~f~~Ae~lF~~~~Y~~al~~~ 542 (569)
T PRK04778 492 TEELVENATLTEQLIQYANRYRSDNEEVAEALNEAERLFREYDYKAALEII 542 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 7655333 3333333 345555555666666666555444444444433
No 79
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.75 E-value=1.8e-05 Score=69.54 Aligned_cols=66 Identities=11% Similarity=0.123 Sum_probs=29.0
Q ss_pred HHHHHHHhcCC-CC-CccccHHHHHHHHhhhhh---cccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCH
Q psy6493 1218 EFEAILDLVDP-NR-DGHVSLQEYMAFMISKET---ENVQSSEEIENAFHAIAASDRPYVTKEELYANLTK 1283 (1321)
Q Consensus 1218 ~~~~~~~~~d~-~~-~g~i~~~ef~~~~~~~~~---~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~ 1283 (1321)
.+...|..+|. ++ +|.|+..+|..++..... ....+...+..+|..+|.+++|.|+.++|...+..
T Consensus 9 ~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 9 SLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 33444445543 43 355555555554432110 11223344445555555555555555555444443
No 80
>PRK04863 mukB cell division protein MukB; Provisional
Probab=97.74 E-value=0.43 Score=63.53 Aligned_cols=173 Identities=9% Similarity=0.099 Sum_probs=93.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh---hH--------hhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 755 TMAAVQGLLKKHDAFETDFSVHRDRCADICSAG---NK--------LIEAKNHHADSITQRCQQLQLKLDNLMALATKRK 823 (1321)
Q Consensus 755 ~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~---~~--------L~~~~~~~~~~i~~~~~~l~~~~~~l~~~~~~r~ 823 (1321)
++.....+..+++............+-.+.... .. ++.....-.+.|+..+..+...+..+.....+-.
T Consensus 933 Dp~~~e~lr~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~~l~~~~~~~~~Le~~Le~iE~~~~~areql~qaq 1012 (1486)
T PRK04863 933 DPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQ 1012 (1486)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444333322 22 2222233356788888888888888888888887
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhHHhhhcccccCCCHHHHHHHHHhHHHHHHhhhhhhhhhH-----------HHHH
Q psy6493 824 TKLMDNSA-YLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGI-----------QNIT 891 (1321)
Q Consensus 824 ~~Le~~~~-~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~ 891 (1321)
..+..+-. +..+...+.....-+.+.+..+..-.++.+...-......-..+...+.. ...+- ..+.
T Consensus 1013 ~q~~q~~q~l~slksslq~~~e~L~E~eqe~~~~g~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~re~EIe 1091 (1486)
T PRK04863 1013 AQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERARARRDELHARLSA-NRSRRNQLEKQLTFCEAEMD 1091 (1486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHhHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHH
Confidence 77776653 34555666777777778888777655544443322222222333333322 11111 1222
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 892 TLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNAR 929 (1321)
Q Consensus 892 ~~~~~l~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r 929 (1321)
.+...|-.. ..+...++..+..++.+|..|...+...
T Consensus 1092 ~L~kkL~~~-~~e~~~~re~I~~aK~~W~~v~~~~~~~ 1128 (1486)
T PRK04863 1092 NLTKKLRKL-ERDYHEMREQVVNAKAGWCAVLRLVKDN 1128 (1486)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222222111 1223567888888888888888777653
No 81
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.73 E-value=2.4e-05 Score=66.99 Aligned_cols=61 Identities=21% Similarity=0.346 Sum_probs=44.4
Q ss_pred HHHHHHHHH-HccCCCC-CcCHHHHHhhCCHhh-------H-HHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1255 EEIENAFHA-IAASDRP-YVTKEELYANLTKEM-------A-DYCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1255 ~~~~~~F~~-~D~~~~G-~I~~~el~~~l~~~~-------~-~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
..+..+|.. +|++|+| +|+.+||+.++.... . +..+..+++.+|.| +| |.|+|++|+.+|.
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d-~D---G~I~f~EF~~l~~ 79 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLN-SD---GQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCC-CC---CcCcHHHHHHHHH
Confidence 457788888 6777876 899999988775541 1 23344555678888 88 9999999988775
No 82
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.73 E-value=2.1e-05 Score=64.48 Aligned_cols=54 Identities=20% Similarity=0.263 Sum_probs=23.9
Q ss_pred HHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHh
Q psy6493 1222 ILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYA 1279 (1321)
Q Consensus 1222 ~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~ 1279 (1321)
+|..+|.+++|.|+..+|..++... +.+.+.+..+|..+|.+++|.|+.++|..
T Consensus 4 ~F~~~D~~~~G~i~~~el~~~l~~~----g~~~~~~~~i~~~~d~~~~g~i~~~ef~~ 57 (67)
T cd00052 4 IFRSLDPDGDGLISGDEARPFLGKS----GLPRSVLAQIWDLADTDKDGKLDKEEFAI 57 (67)
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHHc----CCCHHHHHHHHHHhcCCCCCcCCHHHHHH
Confidence 3444444444444444444444322 12334444444444444444444444443
No 83
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=97.69 E-value=2.7e-05 Score=68.82 Aligned_cols=63 Identities=14% Similarity=0.249 Sum_probs=45.7
Q ss_pred hHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCH
Q psy6493 1217 PEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTK 1283 (1321)
Q Consensus 1217 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~ 1283 (1321)
..+..+|..+|.+++|.|++.+|..++... +.+...+..+|..+|.+++|+|+.++|...+..
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 455667777888888888888888877543 345667777888888888888888888765543
No 84
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.57 E-value=6.4e-05 Score=65.30 Aligned_cols=61 Identities=26% Similarity=0.386 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcc--CCCCCcCHHHHHhhCCHh-h-------HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1255 EEIENAFHAIAA--SDRPYVTKEELYANLTKE-M-------ADYCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1255 ~~~~~~F~~~D~--~~~G~I~~~el~~~l~~~-~-------~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
..+..+|..||+ +++|+|+.++|..++... + ....+..|+..+|.+ ++ |.|+|++|+.++.
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~-~~---g~I~f~eF~~~~~ 78 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVN-KD---GKVDFQEFLVLIG 78 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccC-CC---CcCcHHHHHHHHH
Confidence 345666777777 677777777776654320 0 022333444456666 66 7777777766553
No 85
>PRK02224 chromosome segregation protein; Provisional
Probab=97.53 E-value=0.7 Score=60.42 Aligned_cols=17 Identities=29% Similarity=0.261 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy6493 694 EIEQRLKLLNQAWSELK 710 (1321)
Q Consensus 694 ~i~~~l~~l~~~w~~l~ 710 (1321)
.+...+..+..++..+.
T Consensus 624 ~~~~~l~~~r~~i~~l~ 640 (880)
T PRK02224 624 ERRERLAEKRERKRELE 640 (880)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34455555555555543
No 86
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.51 E-value=6.3e-05 Score=48.22 Aligned_cols=29 Identities=41% Similarity=0.763 Sum_probs=26.4
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHc
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRAL 1203 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~ 1203 (1321)
++..+|+.||+|++|.|+..||..++.++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 47889999999999999999999998764
No 87
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.48 E-value=0.00012 Score=64.17 Aligned_cols=71 Identities=18% Similarity=0.387 Sum_probs=59.3
Q ss_pred hcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1165 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1165 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
++.+++++...+..+|...|. ++|.|+-.+.+.++...|.+ ...+..++..+|.+++|.+++.||+-.|.
T Consensus 1 ~~~ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~L~---------~~~L~~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 1 MPKLSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSGLP---------RDVLAQIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp ----SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTTSS---------HHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcCCC---------HHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence 456788899999999999985 68999999999999988875 47899999999999999999999998774
Q ss_pred h
Q psy6493 1245 S 1245 (1321)
Q Consensus 1245 ~ 1245 (1321)
-
T Consensus 71 L 71 (104)
T PF12763_consen 71 L 71 (104)
T ss_dssp H
T ss_pred H
Confidence 3
No 88
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation [].; GO: 0000921 septin ring assembly, 0005940 septin ring, 0016021 integral to membrane
Probab=97.45 E-value=0.5 Score=56.97 Aligned_cols=167 Identities=17% Similarity=0.233 Sum_probs=85.3
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy6493 130 EGLERDLAALGDKIRQLDETANRLMQTHPETAEQTYAKQKEINEEWTQLTAKANTRKEKLLDSYDLQRFLSDYRDLMSWI 209 (1321)
Q Consensus 130 ~~l~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl 209 (1321)
..+...+......+..+......|..... .-...+..+..+|..+...+.........+.. .+...+..+...+
T Consensus 104 ~~~~~~l~~~e~~i~~i~~~l~~L~~~e~----~nr~~i~~l~~~y~~lrk~ll~~~~~~G~a~~--~Le~~L~~ie~~F 177 (560)
T PF06160_consen 104 KEIEEQLDEIEEDIKEILDELDELLESEE----KNREEIEELKEKYRELRKELLAHSFSYGPAIE--ELEKQLENIEEEF 177 (560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhhhchhHH--HHHHHHHHHHHHH
Confidence 34444455555555555555555553222 22355677888888888777777666654443 3334455555555
Q ss_pred HHHhhhccCCcccCCHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHH
Q psy6493 210 NSMMGLVSSDELANDVTGAEALLERHQEHRTEIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWI 289 (1321)
Q Consensus 210 ~~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~ 289 (1321)
+....... .+|...+...+...+.-...+...-..+-.+..... ..+...++.|...+..+...
T Consensus 178 ~~f~~lt~----~GD~~~A~eil~~l~~~~~~l~~~~e~IP~l~~~l~----------~~~P~ql~eL~~gy~~m~~~-- 241 (560)
T PF06160_consen 178 SEFEELTE----NGDYLEAREILEKLKEETDELEEIMEDIPKLYKELQ----------KEFPDQLEELKEGYREMEEE-- 241 (560)
T ss_pred HHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH----------HHhHHHHHHHHHHHHHHHHC--
Confidence 55554443 356666666665555544444432222222222221 22345555555555543332
Q ss_pred HHHHHHHHHHHH--HHHHHhHHHHHHHHHHHHhhhccCC
Q psy6493 290 ARRMQLDQCLEL--QLFYRDCEQAENWMSAREAFLNAEE 326 (1321)
Q Consensus 290 ~r~~~L~~~~~~--~~f~~~~~~l~~wl~~~e~~l~~~~ 326 (1321)
.+.+ -.+...+..+..-+......|...+
T Consensus 242 --------gy~l~~~~i~~~i~~i~~~l~~~~~~L~~l~ 272 (560)
T PF06160_consen 242 --------GYYLEHLDIEEEIEQIEEQLEEALALLKNLE 272 (560)
T ss_pred --------CCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1212 2455566666666666666665433
No 89
>KOG0036|consensus
Probab=97.43 E-value=0.00028 Score=75.00 Aligned_cols=92 Identities=17% Similarity=0.350 Sum_probs=63.0
Q ss_pred HHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCC
Q psy6493 1174 KEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQS 1253 (1321)
Q Consensus 1174 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 1253 (1321)
.++..+|..+|.++||.|+..|+...++.+|..+ +++....+|..+|.++++.|++.+|..++... +
T Consensus 82 ~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l-------~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~------p 148 (463)
T KOG0036|consen 82 LELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQL-------SDEKAAKFFEHMDKDGKATIDLEEWRDHLLLY------P 148 (463)
T ss_pred HHHHHHHhhhccccCCccCHHHHHHHHHHhCCcc-------CHHHHHHHHHHhccCCCeeeccHHHHhhhhcC------C
Confidence 3466777788888888888888888888888777 67777778888888888888888887776432 2
Q ss_pred HHHHHHH------HHHHccCCCCCcCHHHHHh
Q psy6493 1254 SEEIENA------FHAIAASDRPYVTKEELYA 1279 (1321)
Q Consensus 1254 ~~~~~~~------F~~~D~~~~G~I~~~el~~ 1279 (1321)
...+..+ +..+|.+.+..|+ ++|..
T Consensus 149 ~s~i~di~~~W~h~~~idigE~~~iP-dg~s~ 179 (463)
T KOG0036|consen 149 ESDLEDIYDFWRHVLLIDIGEDAVLP-DGDSK 179 (463)
T ss_pred hhHHHHHHHhhhhheEEEccccccCC-cchHH
Confidence 3333333 2346777777766 44433
No 90
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.39 E-value=0.00048 Score=55.41 Aligned_cols=61 Identities=23% Similarity=0.291 Sum_probs=48.6
Q ss_pred HHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhC
Q psy6493 1219 FEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANL 1281 (1321)
Q Consensus 1219 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l 1281 (1321)
+..+|..+|.+++|.|++.+|..++.... ...+...+..+|..+|.+++|.|+.++|...+
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG--EGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 45678888889999999999998886542 45566778888999998888999998887654
No 91
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=97.39 E-value=0.62 Score=56.53 Aligned_cols=418 Identities=15% Similarity=0.190 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhhHH-HH--HH---HHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHHHHH
Q psy6493 165 YAKQKEINEEWTQ-LTAKANTRKEKLLDSYD-LQ--RF---LSDYRDLMSWINSMMGLVSSDELANDVTGAEALLERHQE 237 (1321)
Q Consensus 165 ~~~~~~l~~~w~~-l~~~~~~r~~~L~~~~~-~~--~f---~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~ 237 (1321)
..........|++ +...+.+-...|-.+-. .. .| ...+..+.+-|+.++..+.. -...+...+.....
T Consensus 63 ~~~f~~w~~~~~~i~~~~~~~ie~~l~~ae~~~~~~~f~~a~~~~~~~~~~l~~~e~~~~~-----i~~~l~~l~~~e~~ 137 (569)
T PRK04778 63 EEKFEEWRQKWDEIVTNSLPDIEEQLFEAEELNDKFRFRKAKHEINEIESLLDLIEEDIEQ-----ILEELQELLESEEK 137 (569)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 3455667777877 34444444445544433 22 22 33444445555555544322 13445555666666
Q ss_pred HHHHHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy6493 238 HRTEIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLELQLFYRDCEQAENWMSA 317 (1321)
Q Consensus 238 l~~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~ 317 (1321)
...++......+..+......--..-+++.+.+...|..+...+..+...... +..++..--+......+..+..-+..
T Consensus 138 nr~~v~~l~~~y~~~rk~ll~~~~~~G~a~~~le~~l~~~e~~f~~f~~l~~~-Gd~~~A~e~l~~l~~~~~~l~~~~~~ 216 (569)
T PRK04778 138 NREEVEQLKDLYRELRKSLLANRFSFGPALDELEKQLENLEEEFSQFVELTES-GDYVEAREILDQLEEELAALEQIMEE 216 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666555432221222456688999999999999888775432 22222222222333333333333333
Q ss_pred HHhhhccCC--CCCCHHHHHHHHHHHHHHHHH---HH--HhHHHHHHHHHHHHHHHhh-cCCCCchHHHHHHHHHHH---
Q psy6493 318 REAFLNAEE--VDSKTDNVEALIKKHEDFDKA---IN--AHEEKIGALQTLADQLIAA-DHYAAKPIDDKRKQVLDR--- 386 (1321)
Q Consensus 318 ~e~~l~~~~--~~~~~~~~~~~l~~~~~l~~~---l~--~~~~~~~~l~~~~~~L~~~-~~~~~~~i~~~~~~l~~r--- 386 (1321)
.-..+.... +| ..+..+...++.+..+ +. .....+..+.......+.. +......+...+..+..+
T Consensus 217 iP~l~~~~~~~~P---~ql~el~~gy~~m~~~gy~~~~~~i~~~i~~l~~~i~~~~~~l~~l~l~~~~~~~~~i~~~Id~ 293 (569)
T PRK04778 217 IPELLKELQTELP---DQLQELKAGYRELVEEGYHLDHLDIEKEIQDLKEQIDENLALLEELDLDEAEEKNEEIQERIDQ 293 (569)
T ss_pred HHHHHHHHHHHhh---HHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 222221110 11 1122222222211111 00 1122222222222221110 111223333333333333
Q ss_pred -HHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHhhhhcccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q psy6493 387 -WRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLA 465 (1321)
Q Consensus 387 -~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~Wl~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~ 465 (1321)
|+.+......+...-.....+..+...+.+-..-+..-...+.. .+. --...+...+.+..++......+..+..
T Consensus 294 Lyd~lekE~~A~~~vek~~~~l~~~l~~~~e~~~~l~~Ei~~l~~-sY~---l~~~e~~~~~~lekeL~~Le~~~~~~~~ 369 (569)
T PRK04778 294 LYDILEREVKARKYVEKNSDTLPDFLEHAKEQNKELKEEIDRVKQ-SYT---LNESELESVRQLEKQLESLEKQYDEITE 369 (569)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc---cCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333322222222222222222222211111111111111 110 0022334445555666555555554433
Q ss_pred HhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHHHHHHhhcCCCCCCCH
Q psy6493 466 MGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANK-QRTYIAAVKDLDFWLGEVESLLTSEDSGKDL 544 (1321)
Q Consensus 466 ~~~~l~~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~-~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~ 544 (1321)
... . .. .....+...+..+..+...+...-..-...+...-. -......+..+..-|......+.....|+-|
T Consensus 370 ~i~---~-~~--~~ysel~e~leel~e~leeie~eq~ei~e~l~~Lrk~E~eAr~kL~~~~~~L~~ikr~l~k~~lpgip 443 (569)
T PRK04778 370 RIA---E-QE--IAYSELQEELEEILKQLEEIEKEQEKLSEMLQGLRKDELEAREKLERYRNKLHEIKRYLEKSNLPGLP 443 (569)
T ss_pred HHH---c-CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 222 1 11 236677777777777777777666655555555433 3444555666666666677666555444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 545 ASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLN 615 (1321)
Q Consensus 545 ~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le 615 (1321)
......+ ......+..+ ...|-. +|.+...|...+..+..+++.|......-.....
T Consensus 444 ~~y~~~~----------~~~~~~i~~l---~~~L~~-g~VNm~ai~~e~~e~~~~~~~L~~q~~dL~~~a~ 500 (569)
T PRK04778 444 EDYLEMF----------FEVSDEIEAL---AEELEE-KPINMEAVNRLLEEATEDVETLEEETEELVENAT 500 (569)
T ss_pred HHHHHHH----------HHHHHHHHHH---HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4432221 1222222222 234444 7888888888888888888887777665544433
No 92
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.31 E-value=0.00034 Score=53.97 Aligned_cols=49 Identities=18% Similarity=0.360 Sum_probs=40.9
Q ss_pred CccccHHHHHHHHhhhhhccc-CCHHHHHHHHHHHccCCCCCcCHHHHHhhC
Q psy6493 1231 DGHVSLQEYMAFMISKETENV-QSSEEIENAFHAIAASDRPYVTKEELYANL 1281 (1321)
Q Consensus 1231 ~g~i~~~ef~~~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~~el~~~l 1281 (1321)
+|.|+.++|..++... +.. .+..++..+|..+|.+++|+|+.+||...+
T Consensus 2 ~G~i~~~~~~~~l~~~--g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~ 51 (54)
T PF13833_consen 2 DGKITREEFRRALSKL--GIKDLSEEEVDRLFREFDTDGDGYISFDEFISMM 51 (54)
T ss_dssp SSEEEHHHHHHHHHHT--TSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHH
T ss_pred cCEECHHHHHHHHHHh--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Confidence 6899999999999443 234 777889999999999999999999998764
No 93
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.26 E-value=0.00018 Score=47.55 Aligned_cols=30 Identities=40% Similarity=0.686 Sum_probs=26.6
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHH-HcC
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLR-ALG 1204 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~-~~~ 1204 (1321)
+++.+|..||.|++|+|+..||..+|+ ++|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 478899999999999999999999999 676
No 94
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.26 E-value=0.00033 Score=44.96 Aligned_cols=24 Identities=21% Similarity=0.516 Sum_probs=11.6
Q ss_pred HHHHHhcCCCCCccccHHHHHHHH
Q psy6493 1220 EAILDLVDPNRDGHVSLQEYMAFM 1243 (1321)
Q Consensus 1220 ~~~~~~~d~~~~g~i~~~ef~~~~ 1243 (1321)
..+|+.+|.|++|.|+++||..++
T Consensus 3 ~~~F~~~D~d~dG~I~~~Ef~~~~ 26 (29)
T PF00036_consen 3 KEAFREFDKDGDGKIDFEEFKEMM 26 (29)
T ss_dssp HHHHHHHSTTSSSEEEHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCCHHHHHHHH
Confidence 344444455555555555554444
No 95
>KOG0161|consensus
Probab=97.23 E-value=1.7 Score=58.43 Aligned_cols=54 Identities=7% Similarity=0.051 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHhHHhhh
Q psy6493 800 SITQRCQQLQLKLDNLMALATKRKTKLMDNSA--------YLQFMWKADVVESWIADKETHV 853 (1321)
Q Consensus 800 ~i~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~--------~~~~~~~~~~l~~wl~~~e~~l 853 (1321)
.+..+-..+...|..+...+..-...|+.... -.++..++.++..+++.+...-
T Consensus 1566 ~l~ek~Ee~E~~rk~~~~~i~~~q~~Le~E~r~k~e~~r~KKkle~di~elE~~ld~ank~~ 1627 (1930)
T KOG0161|consen 1566 RLQEKDEEIEELRKNLQRQLESLQAELEAETRSKSEALRSKKKLEGDINELEIQLDHANKAN 1627 (1930)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhh
Confidence 34444555555555555555544444443211 1134445666666666655543
No 96
>KOG0030|consensus
Probab=97.18 E-value=0.002 Score=57.49 Aligned_cols=64 Identities=22% Similarity=0.472 Sum_probs=56.6
Q ss_pred HHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHH
Q psy6493 1172 ALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1243 (1321)
Q Consensus 1172 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 1243 (1321)
....|-+.++.||++++|.|...+++.+|..+|..+ ++.++..++.-. .|.+|.|+|+.|+..+
T Consensus 86 t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl-------~eeEVe~Llag~-eD~nG~i~YE~fVk~i 149 (152)
T KOG0030|consen 86 TYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKL-------TEEEVEELLAGQ-EDSNGCINYEAFVKHI 149 (152)
T ss_pred cHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhc-------cHHHHHHHHccc-cccCCcCcHHHHHHHH
Confidence 445688889999999999999999999999999999 899999998765 3678999999999865
No 97
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.18 E-value=0.002 Score=54.21 Aligned_cols=71 Identities=17% Similarity=0.389 Sum_probs=53.8
Q ss_pred HHHHHHHhhhhccccCcCCCChHHHHHHHHH-cCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1172 ALKEFSMMFKHFDKDKSGKLNQTEFKSCLRA-LGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1172 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
.+..+-.+|..|..+ .|.++..||+.+|.. ++.-+ .+......+..+|...|.++||.|+|.||+.++..+
T Consensus 6 ai~~lI~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~~l---~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 6 SMEKMMLTFHKFAGE-KNYLNRDDLQKLMEKEFSEFL---KNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHHHcCC-CCcCCHHHHHHHHHHHhHHHH---cCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 455677889999854 579999999999843 22111 111145678999999999999999999999998765
No 98
>PLN02964 phosphatidylserine decarboxylase
Probab=97.17 E-value=0.00093 Score=78.88 Aligned_cols=72 Identities=24% Similarity=0.332 Sum_probs=63.8
Q ss_pred CCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1167 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1167 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
..++.+...+..+|..+|.|++|.|+..||..++..++... +.+++..+|..+|.|++|.|++++|..++..
T Consensus 172 ~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~-------seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 172 DPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLV-------AANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCC-------CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 34555666799999999999999999999999999888655 7788999999999999999999999998866
No 99
>KOG0035|consensus
Probab=97.16 E-value=0.00064 Score=81.07 Aligned_cols=316 Identities=23% Similarity=0.364 Sum_probs=226.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCCC-CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhhcCCCchHHHHHH
Q psy6493 727 QHFLAKVEEEEAWISEKQQLLSVEDYG-DTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRC 805 (1321)
Q Consensus 727 ~~f~~~~~el~~wl~~~e~~l~~~~~~-~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~ 805 (1321)
..|-.....-..|....+..+...+++ .-+..+++..+.|.++..++..+...+..+...+..|......++......+
T Consensus 397 ~~f~~~~s~~~~~~pg~e~~l~~~d~~~~lle~~ke~~~~~ea~~~~~~~~~~~~e~~~ai~~~~~~~~~~~~~~~a~~~ 476 (890)
T KOG0035|consen 397 SKFSQKASLHESWTPGKEQVLFLNDYGQALLEECKELTKKHEAFESDLSAHQDNVEAFCAIAHELNELLYDDAKLVAADC 476 (890)
T ss_pred hhccccCchhhhhccchhhhhhhcchHHHHHHHHHhhcccccccccchhhhhcchhHHHHHHHHhhhhhhhhhhhhhhhh
Confidence 567777777888888888888776666 5678889999999999999999999999999999999988778888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHhHHhhhcccccCCCHHHHHHHHHhHHHHHH
Q psy6493 806 QQLQLKLDNLMALATKRKTKLMDNS--------AYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDA 877 (1321)
Q Consensus 806 ~~l~~~~~~l~~~~~~r~~~Le~~~--------~~~~~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~ 877 (1321)
..+.+.|..+-.....|+..|.... -...|.....-+..|+......+.+....-.+.+.+.+...|..|..
T Consensus 477 q~i~dq~~~~~~ls~~r~pal~~~~~~~dk~~~~~le~a~Raa~~~~~l~~~~~d~~d~~~~~~ire~~~~~~a~~~~k~ 556 (890)
T KOG0035|consen 477 QHICDQWDDLGQLSRKRRPALMQMEKVLDKLAVLTLEFAKRAAPFNNWLKGVQEDLQDNEISYSIREIQRLRAADLQFKS 556 (890)
T ss_pred hhccccccccchhhhhhchhhhhhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhcccchhccchHhhhccchhhhhhcc
Confidence 9999999998888887777776644 23466667788999999988888777777778888888888888877
Q ss_pred hhhhhhhhh--HHHHHHHHHHHHhcC----C-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy6493 878 GLHAFEHEG--IQNITTLKDQLVASN----H-DQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTF 950 (1321)
Q Consensus 878 ~l~~~~~~~--~~~~~~~~~~l~~~~----~-~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f 950 (1321)
.+....... ......-+....... . ...+.+.. .+...|+.+.....++...+.....+-...+.+...|
T Consensus 557 t~p~a~~~~~~~~~e~~e~~~~~~~~~~~~~~~~np~~~~---s~~~~~d~v~~~~~~~~~~~~~~~~~q~~~~s~~~~~ 633 (890)
T KOG0035|consen 557 TLPEADGEGQKISDEEKEREKVSEQLNPKIEPDTNPYTTL---SIYGKWDAVLSSVPDRDSIEANVHARQQPNESLRRVF 633 (890)
T ss_pred cCccccchhhhhhhhhhHHHHhhhhcCccccccccccccc---ccccchhhhcccccccchhhHHHHHhhccCccccccc
Confidence 665532211 111111222222221 1 11133333 2888999999999998887776666555555666788
Q ss_pred HHHhhHHHhhHHhhhhhcCCC--cCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcchhhcHHH
Q psy6493 951 AKKASSFNSWFENAEEDLTDP--VRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEA 1028 (1321)
Q Consensus 951 ~~~~~~~~~wl~~~e~~l~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~ 1028 (1321)
....+....|+...-...... ...++++. ...++.....-+-..++.++.+......+.+...+++.++......
T Consensus 634 ~q~an~~~p~vp~~~~e~s~~~~~~~gt~e~---~~~rLr~~~~~~~~~k~~~~~~~~~~q~~~~~~~~~~~~~~~~~e~ 710 (890)
T KOG0035|consen 634 AQQANLDGPWVPAKMEESSRININDQGTLED---RLERLRETEERSMNYKSNGDLLAKQHQLMQEDIIFENKHTRYTMED 710 (890)
T ss_pred cccccCCCcccCchhhcccccccccCCCHHH---HHHHHHHHHHHhhccCcchhHHHHHHHHhhhhccccccccccchhh
Confidence 999999999998876655542 22344433 3333333333344477777777777777777767777788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy6493 1029 LEDTWRNLQKIIKERDIELA 1048 (1321)
Q Consensus 1029 l~~~w~~l~~~~~~r~~~L~ 1048 (1321)
+..-|..+...+..-+...+
T Consensus 711 ~~~g~e~~~~~~~~~~~~~e 730 (890)
T KOG0035|consen 711 LKVGWEELLTIIERTINESE 730 (890)
T ss_pred ccccccccccccccccccHH
Confidence 99999998887765544333
No 100
>KOG4674|consensus
Probab=97.15 E-value=1.8 Score=57.17 Aligned_cols=76 Identities=8% Similarity=0.135 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 438 NIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCV--GSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANK 513 (1321)
Q Consensus 438 ~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~--~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~ 513 (1321)
.+...|..++.+..=...+...+..+...|..+-....+. .....+...+..+..+...|.....+....+...+.
T Consensus 523 iIse~Lv~F~nI~eLqekN~eLL~~vR~Lae~lE~~E~~~~~~~~~~~k~~~~~a~e~i~~L~~~l~e~~~~i~sLl~ 600 (1822)
T KOG4674|consen 523 IISERLVEFSNINELQEKNVELLNAVRELAEKLEAAEKTQDKTLQNILKETINEASEKIAELEKELEEQEQRIESLLT 600 (1822)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677766666666666666655555555553322211 123456667777777777777777777666666654
No 101
>KOG0038|consensus
Probab=96.98 E-value=0.002 Score=57.40 Aligned_cols=95 Identities=17% Similarity=0.216 Sum_probs=72.8
Q ss_pred hhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHH---
Q psy6493 1181 KHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEI--- 1257 (1321)
Q Consensus 1181 ~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~--- 1257 (1321)
..|-.||.|.++..+|..++..+....+ .+-.+...|+.+|-|+++.|.-++...++..+ +.+..+.+++
T Consensus 78 e~FSeDG~GnlsfddFlDmfSV~sE~AP------rdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~l-Tr~eLs~eEv~~i 150 (189)
T KOG0038|consen 78 EVFSEDGRGNLSFDDFLDMFSVFSEMAP------RDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSL-TRDELSDEEVELI 150 (189)
T ss_pred HHhccCCCCcccHHHHHHHHHHHHhhCh------HHhhhhheeEEeecCCCCcccHHHHHHHHHHH-hhccCCHHHHHHH
Confidence 3455799999999999999877653321 33445567888999999999999999888776 4455555553
Q ss_pred -HHHHHHHccCCCCCcCHHHHHhhCC
Q psy6493 1258 -ENAFHAIAASDRPYVTKEELYANLT 1282 (1321)
Q Consensus 1258 -~~~F~~~D~~~~G~I~~~el~~~l~ 1282 (1321)
..+....|.||||.++..+|...+.
T Consensus 151 ~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 151 CEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred HHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 5667788999999999999998654
No 102
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=96.98 E-value=0.0014 Score=56.47 Aligned_cols=58 Identities=22% Similarity=0.359 Sum_probs=28.7
Q ss_pred HHHHHHHHccC--CCCCcCHHHHHhhCCHh---hH-----HHHHHcCCCCCCCCCCCCCCCCcchHHHHHhh
Q psy6493 1257 IENAFHAIAAS--DRPYVTKEELYANLTKE---MA-----DYCVERMKPYVDPKTERGIPGALDYIEFTRTL 1318 (1321)
Q Consensus 1257 ~~~~F~~~D~~--~~G~I~~~el~~~l~~~---~~-----~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~ 1318 (1321)
+...|..|+.. ++|+|+.+||+..|... .+ +..+..|+..+|.+ ++ |.|+|++|+.+|
T Consensus 10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d-~d---G~I~f~eF~~~~ 77 (88)
T cd05030 10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTN-QD---GQLSFEEFLVLV 77 (88)
T ss_pred HHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCC-CC---CcCcHHHHHHHH
Confidence 44555555533 24566666666554311 01 22333344455555 55 666666666554
No 103
>KOG0377|consensus
Probab=96.81 E-value=0.0084 Score=64.15 Aligned_cols=65 Identities=17% Similarity=0.320 Sum_probs=44.2
Q ss_pred hHHHHHHHhcCCCCCccccHHHHHHHHhhhhh--cccCCHHHHHHHHHHHccCCCCCcCHHHHHhhC
Q psy6493 1217 PEFEAILDLVDPNRDGHVSLQEYMAFMISKET--ENVQSSEEIENAFHAIAASDRPYVTKEELYANL 1281 (1321)
Q Consensus 1217 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l 1281 (1321)
..+..+|..+|.|++|.|+.+||...+.-+.. +.....+.+-..-+.+|-|+||+|+..||..++
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAF 613 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAF 613 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHH
Confidence 34666777778888888888888776643322 234455667777777788888888887777643
No 104
>KOG0041|consensus
Probab=96.81 E-value=0.00084 Score=63.53 Aligned_cols=61 Identities=21% Similarity=0.234 Sum_probs=48.2
Q ss_pred HHHHHHHHHHccCCCCCcCHHHHHhhCCHhhHH---HHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1255 EEIENAFHAIAASDRPYVTKEELYANLTKEMAD---YCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1255 ~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~~---~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
..+..+|..||.+.||||+..||+.+|.+-+.. --+..|+...|.| .| |+|+|.+|+-++.
T Consensus 99 k~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded-~d---gklSfreflLIfr 162 (244)
T KOG0041|consen 99 KDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDED-FD---GKLSFREFLLIFR 162 (244)
T ss_pred HHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcc-cc---cchhHHHHHHHHH
Confidence 567899999999999999999999988655432 2244566678888 88 9999999986553
No 105
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.74 E-value=0.00084 Score=41.38 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=14.9
Q ss_pred HHHHHHHccCCCCCcCHHHHHh
Q psy6493 1258 ENAFHAIAASDRPYVTKEELYA 1279 (1321)
Q Consensus 1258 ~~~F~~~D~~~~G~I~~~el~~ 1279 (1321)
+.+|..+|.|++|.|+.+||..
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~ 23 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQR 23 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHH
Confidence 4567777777777777777664
No 106
>KOG0751|consensus
Probab=96.71 E-value=0.015 Score=63.32 Aligned_cols=102 Identities=17% Similarity=0.240 Sum_probs=73.1
Q ss_pred HHHHHHHHHhhhhccccCcCCCChHHHHHHHHH-cCCCCCcccCCCCchHHHHHH-HhcCCCCCccccHHHHHHHHhhhh
Q psy6493 1170 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRA-LGYDLPMVEEGQPDPEFEAIL-DLVDPNRDGHVSLQEYMAFMISKE 1247 (1321)
Q Consensus 1170 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~g~i~~~ef~~~~~~~~ 1247 (1321)
++++..+.--|...+.++...+++++|....-. ++.+- ....+..++ ...|...||-|+|.||+.+-.-+
T Consensus 32 ~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~-------~n~~~v~Lla~iaD~tKDglisf~eF~afe~~l- 103 (694)
T KOG0751|consen 32 PKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESN-------FNDKIVRLLASIADQTKDGLISFQEFRAFESVL- 103 (694)
T ss_pred hHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhccccc-------CChHHHHHHHhhhhhcccccccHHHHHHHHhhc-
Confidence 455555555556667888889999999765432 23222 344455554 44577889999999999886444
Q ss_pred hcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCC
Q psy6493 1248 TENVQSSEEIENAFHAIAASDRPYVTKEELYANLT 1282 (1321)
Q Consensus 1248 ~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~ 1282 (1321)
..+......+|..||+.++|.+|.+++...+.
T Consensus 104 ---C~pDal~~~aFqlFDr~~~~~vs~~~~~~if~ 135 (694)
T KOG0751|consen 104 ---CAPDALFEVAFQLFDRLGNGEVSFEDVADIFG 135 (694)
T ss_pred ---cCchHHHHHHHHHhcccCCCceehHHHHHHHh
Confidence 33456678999999999999999999998553
No 107
>PRK03918 chromosome segregation protein; Provisional
Probab=96.69 E-value=3.9 Score=53.68 Aligned_cols=14 Identities=14% Similarity=-0.073 Sum_probs=5.8
Q ss_pred CCCHHHHHHHHHhH
Q psy6493 859 GRDLSTVQTLLTKQ 872 (1321)
Q Consensus 859 ~~~~~~~~~~~~~~ 872 (1321)
+-|+.........+
T Consensus 824 ~lD~~~~~~l~~~l 837 (880)
T PRK03918 824 FLDEERRRKLVDIM 837 (880)
T ss_pred ccCHHHHHHHHHHH
Confidence 34444444443333
No 108
>PRK03918 chromosome segregation protein; Provisional
Probab=96.68 E-value=3.9 Score=53.62 Aligned_cols=10 Identities=30% Similarity=0.415 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q psy6493 698 RLKLLNQAWS 707 (1321)
Q Consensus 698 ~l~~l~~~w~ 707 (1321)
.+..+..++.
T Consensus 641 ~i~~l~~~~~ 650 (880)
T PRK03918 641 RLEELRKELE 650 (880)
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 109
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.60 E-value=0.0012 Score=43.62 Aligned_cols=27 Identities=26% Similarity=0.378 Sum_probs=22.3
Q ss_pred HHHHHHHHHccCCCCCcCHHHHHhhCC
Q psy6493 1256 EIENAFHAIAASDRPYVTKEELYANLT 1282 (1321)
Q Consensus 1256 ~~~~~F~~~D~~~~G~I~~~el~~~l~ 1282 (1321)
+++.+|..||.|++|+|+.+||..+|.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 367899999999999999999988765
No 110
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.59 E-value=0.0037 Score=45.48 Aligned_cols=48 Identities=17% Similarity=0.328 Sum_probs=39.8
Q ss_pred CChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1191 LNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1191 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
++..|++.+|+.++..+ ++..+..+|..+|.+++|+++.+||..|+..
T Consensus 2 msf~Evk~lLk~~NI~~-------~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEM-------DDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHHHHTT-----------HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCc-------CHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 67889999999999998 8899999999999999999999999999854
No 111
>KOG2562|consensus
Probab=96.58 E-value=0.0082 Score=65.41 Aligned_cols=56 Identities=21% Similarity=0.371 Sum_probs=41.6
Q ss_pred HHHHccCCCCCcCHHHHHhh----CCHhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1261 FHAIAASDRPYVTKEELYAN----LTKEMADYCVERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1261 F~~~D~~~~G~I~~~el~~~----l~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
|..+|+|++|.|+.++|... ++.--++.++..+.+..-.. ++ |+++|++|+-+++.
T Consensus 284 FweLD~Dhd~lidk~~L~ry~d~tlt~~ivdRIFs~v~r~~~~~-~e---GrmdykdFv~FilA 343 (493)
T KOG2562|consen 284 FWELDTDHDGLIDKEDLKRYGDHTLTERIVDRIFSQVPRGFTVK-VE---GRMDYKDFVDFILA 343 (493)
T ss_pred HhhhccccccccCHHHHHHHhccchhhHHHHHHHhhccccceee-ec---CcccHHHHHHHHHH
Confidence 88889999999999999984 44444555555454444445 56 99999999998764
No 112
>PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules []. KAR9 localises at the shmoo tip in mating cells and at the tip of the growing bud in anaphase [].
Probab=96.53 E-value=3 Score=51.01 Aligned_cols=117 Identities=16% Similarity=0.236 Sum_probs=62.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhc---cc-ccCCCHHHHHHHHHhH
Q psy6493 797 HADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVK---SE-EYGRDLSTVQTLLTKQ 872 (1321)
Q Consensus 797 ~~~~i~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~~~~~~~~~~~l~~wl~~~e~~l~---~~-~~~~~~~~~~~~~~~~ 872 (1321)
..+.|..+...|..+|..|...+..-++.|-+.-...=|..-..++..-++..+..+. .. +.+.....-....++.
T Consensus 236 a~e~L~~r~~~L~~k~~~L~~e~~~LK~ELiedRW~~vFr~l~~q~~~m~esver~~~kl~~~~~~~~~~~~~~~l~~~i 315 (683)
T PF08580_consen 236 ACEELEDRYERLEKKWKKLEKEAESLKKELIEDRWNIVFRNLGRQAQKMCESVERSLSKLQEAIDSGIHLDNPSKLSKQI 315 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHH
Confidence 3467888889999999999999888877776654434444444555544444444443 11 1122222222222222
Q ss_pred HHHHHhhhhhhhhhHHHHH-HHHHHHHhcCCCChHHHHHHHH-HHHHHHHHHH
Q psy6493 873 ETFDAGLHAFEHEGIQNIT-TLKDQLVASNHDQTPAIVKRHG-DVIARWQKLL 923 (1321)
Q Consensus 873 ~~~~~~l~~~~~~~~~~~~-~~~~~l~~~~~~~~~~i~~~~~-~l~~~w~~l~ 923 (1321)
+.+......+ +..|. +....++.. . |..+++ +|..+|..|+
T Consensus 316 ~s~~~k~~~~----~~~I~ka~~~sIi~~-----g-v~~r~n~~L~~rW~~L~ 358 (683)
T PF08580_consen 316 ESKEKKKSHY----FPAIYKARVLSIIDK-----G-VADRLNADLAQRWLELK 358 (683)
T ss_pred HHHHHHHhcc----HHHHHHHHHHHhhhh-----h-HHHHhhHHHHHHHHHHH
Confidence 2222222211 11110 222234432 2 777777 9999999997
No 113
>KOG2643|consensus
Probab=96.51 E-value=0.0028 Score=68.21 Aligned_cols=124 Identities=14% Similarity=0.218 Sum_probs=80.8
Q ss_pred ccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcc--c---------
Q psy6493 1183 FDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETEN--V--------- 1251 (1321)
Q Consensus 1183 ~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~--~--------- 1251 (1321)
++-+.+|.|+..|+.-++.-+..+ ...+.-.|..+|.||+|.|+.+||...+.-..... .
T Consensus 208 ~~lg~~GLIsfSdYiFLlTlLS~p---------~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt 278 (489)
T KOG2643|consen 208 YKLGESGLISFSDYIFLLTLLSIP---------ERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTT 278 (489)
T ss_pred EEcCCCCeeeHHHHHHHHHHHccC---------cccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccc
Confidence 455678999999999888777654 33466678999999999999999987653221110 0
Q ss_pred -CC-HHHHHH--HHHHHccCCCCCcCHHHHHhhCCHhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1252 -QS-SEEIEN--AFHAIAASDRPYVTKEELYANLTKEMADYCVERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1252 -~~-~~~~~~--~F~~~D~~~~G~I~~~el~~~l~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
.. .-.+.. .-..|-++|+|.++.++|..++..-..+-+ ..=+..+|+. .. |.|+-.+|...|..
T Consensus 279 ~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq~Eil-~lEF~~~~~~-~~---g~Ise~DFA~~lL~ 346 (489)
T KOG2643|consen 279 GNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQENLQEEIL-ELEFERFDKG-DS---GAISEVDFAELLLA 346 (489)
T ss_pred cceehhhhhhhHHHHhhccCCCccccHHHHHHHHHHHHHHHH-HHHHHHhCcc-cc---cccCHHHHHHHHHH
Confidence 00 111222 234678899999999999997764432211 1111235555 44 78888888877653
No 114
>KOG4251|consensus
Probab=96.50 E-value=0.0075 Score=58.96 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=46.9
Q ss_pred HHHhcCCCCCccccHHHHHHHHhhhhhc-ccCC------HHHHHHHHHHHccCCCCCcCHHHHHhhCCHhhHH---HHHH
Q psy6493 1222 ILDLVDPNRDGHVSLQEYMAFMISKETE-NVQS------SEEIENAFHAIAASDRPYVTKEELYANLTKEMAD---YCVE 1291 (1321)
Q Consensus 1222 ~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~~~~------~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~~---~~~~ 1291 (1321)
++..+|.+|+..++..+|+........+ .+.. .+..+..=..+|.|.+|.+|.+|+..++.|.... ..+.
T Consensus 241 ivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~ 320 (362)
T KOG4251|consen 241 IVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVN 320 (362)
T ss_pred HHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHH
Confidence 4555666777777777777654332110 0000 1112222245677777777777777766554321 1122
Q ss_pred cCCCCCCCCCCCCCCCCcchHHHHH
Q psy6493 1292 RMKPYVDPKTERGIPGALDYIEFTR 1316 (1321)
Q Consensus 1292 ~~~~~~d~~~~d~~~g~i~~~eF~~ 1316 (1321)
.++...|.+ ++ .+++.++.+.
T Consensus 321 ~~ma~~d~n-~~---~~Ls~eell~ 341 (362)
T KOG4251|consen 321 DIMALTDAN-ND---EKLSLEELLE 341 (362)
T ss_pred HHHhhhccC-CC---cccCHHHHHH
Confidence 233345666 55 6777776654
No 115
>KOG4666|consensus
Probab=96.49 E-value=0.0028 Score=64.99 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=76.3
Q ss_pred hHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHh-hHHH-HHHcCC
Q psy6493 1217 PEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKE-MADY-CVERMK 1294 (1321)
Q Consensus 1217 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~-~~~~-~~~~~~ 1294 (1321)
+.+..+|..||.+++|.++|.+++..+.-+ .++..+..-+..+|+.|+.+-||+++..+|.-.+.-. ++.. -+-.++
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavl-c~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv~~l~v~~lf 337 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVL-CGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGVEVLRVPVLF 337 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheee-eCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCcceeeccccc
Confidence 567889999999999999999999877544 4567778889999999999999999999988755321 2211 122345
Q ss_pred CCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1295 PYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1295 ~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
+.++.. .| |+|+|.+|-+++..
T Consensus 338 ~~i~q~-d~---~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 338 PSIEQK-DD---PKIYASNFRKFAAT 359 (412)
T ss_pred hhhhcc-cC---cceeHHHHHHHHHh
Confidence 556666 66 99999999988753
No 116
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation [].; GO: 0000921 septin ring assembly, 0005940 septin ring, 0016021 integral to membrane
Probab=96.49 E-value=3.2 Score=50.27 Aligned_cols=121 Identities=13% Similarity=0.136 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH------HHHHHhHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHH
Q psy6493 269 EIQDKLGNLAEAREDLE-KAWIARRMQLDQCLEL------QLFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKH 341 (1321)
Q Consensus 269 ~i~~~l~~l~~~~~~l~-~~~~~r~~~L~~~~~~------~~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~ 341 (1321)
.........+..|..+. ..+.+....|..+-.. ......+..+..-|..++..+.. -...+..++..-
T Consensus 57 qt~~~fe~w~~~w~~i~~~~~~~ie~~L~~ae~~~~~~rf~ka~~~i~~~~~~l~~~e~~i~~-----i~~~l~~L~~~e 131 (560)
T PF06160_consen 57 QTEEKFEEWRQKWDEIVTKQLPEIEEQLFEAEEYADKYRFKKAKQAIKEIEEQLDEIEEDIKE-----ILDELDELLESE 131 (560)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH
Confidence 34567778888888877 5566666666554432 33334444555555555444422 122333333333
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHH
Q psy6493 342 EDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEAL 394 (1321)
Q Consensus 342 ~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~ 394 (1321)
..-...+......+..+......-...-++..+.+...+..+...+..+....
T Consensus 132 ~~nr~~i~~l~~~y~~lrk~ll~~~~~~G~a~~~Le~~L~~ie~~F~~f~~lt 184 (560)
T PF06160_consen 132 EKNREEIEELKEKYRELRKELLAHSFSYGPAIEELEKQLENIEEEFSEFEELT 184 (560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344433333333333222222234466778888888888888877644
No 117
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.41 E-value=0.0045 Score=69.26 Aligned_cols=71 Identities=15% Similarity=0.240 Sum_probs=52.0
Q ss_pred ccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhhHHHHHHcCCCCCCCCCCCCCCCCcchHH
Q psy6493 1234 VSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKEMADYCVERMKPYVDPKTERGIPGALDYIE 1313 (1321)
Q Consensus 1234 i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~e 1313 (1321)
...+.++.-......+.......++.+|+.||.||+|+|+.+||.. .+ .+|..+|.| +| |.|+|+|
T Consensus 313 ~~L~~~i~~~~~~~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~------~~----~~F~~~D~d-~D---G~Is~eE 378 (391)
T PRK12309 313 ETLEKLLAHRLARLEGGEAFTHAAQEIFRLYDLDGDGFITREEWLG------SD----AVFDALDLN-HD---GKITPEE 378 (391)
T ss_pred HHHHHHHHHHHHHhhccChhhHHHHHHHHHhCCCCCCcCcHHHHHH------HH----HHHHHhCCC-CC---CCCcHHH
Confidence 3444554432222234456667899999999999999999999952 23 455578999 98 9999999
Q ss_pred HHHhh
Q psy6493 1314 FTRTL 1318 (1321)
Q Consensus 1314 F~~~~ 1318 (1321)
|...+
T Consensus 379 f~~~~ 383 (391)
T PRK12309 379 MRAGL 383 (391)
T ss_pred HHHHH
Confidence 99865
No 118
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.41 E-value=0.012 Score=65.94 Aligned_cols=53 Identities=25% Similarity=0.407 Sum_probs=40.3
Q ss_pred HHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1173 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1173 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
...+..+|..||.|++|.|+..||.. +..+|..+|.|++|.|+++||..++..
T Consensus 333 ~~~l~~aF~~~D~dgdG~Is~~E~~~--------------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 333 THAAQEIFRLYDLDGDGFITREEWLG--------------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred hHHHHHHHHHhCCCCCCcCcHHHHHH--------------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 34577788888888888888888731 345788888888888888888887744
No 119
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.38 E-value=0.0037 Score=52.72 Aligned_cols=57 Identities=19% Similarity=0.432 Sum_probs=26.4
Q ss_pred HHHHHHHHccCCCCCcCHHHHHhhCCHhh--------HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhh
Q psy6493 1257 IENAFHAIAASDRPYVTKEELYANLTKEM--------ADYCVERMKPYVDPKTERGIPGALDYIEFTRTL 1318 (1321)
Q Consensus 1257 ~~~~F~~~D~~~~G~I~~~el~~~l~~~~--------~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~ 1318 (1321)
+..+|..|. .+.|.++..||+..|..+- -...+..++...|.| +| |.|+|.||+.++
T Consensus 10 lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n-~D---g~vdF~EF~~Lv 74 (91)
T cd05024 10 MMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDC-RD---GKVGFQSFFSLI 74 (91)
T ss_pred HHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCC-CC---CcCcHHHHHHHH
Confidence 444555555 3344555555555442110 012222333345555 55 666666665554
No 120
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.36 E-value=0.0021 Score=39.66 Aligned_cols=25 Identities=32% Similarity=0.627 Sum_probs=22.0
Q ss_pred HHHhhhhccccCcCCCChHHHHHHH
Q psy6493 1176 FSMMFKHFDKDKSGKLNQTEFKSCL 1200 (1321)
Q Consensus 1176 ~~~~F~~~D~~~~g~i~~~e~~~~l 1200 (1321)
++++|..+|.|++|.|+..||..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4578999999999999999998754
No 121
>KOG0169|consensus
Probab=96.29 E-value=0.033 Score=65.22 Aligned_cols=139 Identities=22% Similarity=0.351 Sum_probs=106.5
Q ss_pred hcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1165 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1165 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
...+......-+..+|...|++++|.++..+...++..+...+ ....+..+|..++..++|++...+|..+..
T Consensus 127 ~~~~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l-------~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~ 199 (746)
T KOG0169|consen 127 SMRQRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQL-------SESKARRLFKESDNSQTGKLEEEEFVKFRK 199 (746)
T ss_pred hhhhcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhh-------hHHHHHHHHHHHHhhccceehHHHHHHHHH
Confidence 3344456667889999999999999999999999999998887 678888899999988999999999999876
Q ss_pred hhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHh---------hHHHHHHcCCCCCCCCCCCCCCCCcchHHHH
Q psy6493 1245 SKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKE---------MADYCVERMKPYVDPKTERGIPGALDYIEFT 1315 (1321)
Q Consensus 1245 ~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~---------~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~ 1315 (1321)
... ... ++...|..+- ++.++++.++|..+|... .+..+++.+-..-... .. +.++++.|.
T Consensus 200 ~~~----~rp-ev~~~f~~~s-~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~-~~---~~l~ldgF~ 269 (746)
T KOG0169|consen 200 ELT----KRP-EVYFLFVQYS-HGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFR-RH---GLLSLDGFT 269 (746)
T ss_pred hhc----cCc-hHHHHHHHHh-CCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhcc-cc---ceecHHHHH
Confidence 542 222 7888888887 459999999999977433 2344444332111122 22 679999999
Q ss_pred Hhhhc
Q psy6493 1316 RTLFQ 1320 (1321)
Q Consensus 1316 ~~~~~ 1320 (1321)
.+|++
T Consensus 270 ~yL~S 274 (746)
T KOG0169|consen 270 RYLFS 274 (746)
T ss_pred HHhcC
Confidence 99986
No 122
>KOG0751|consensus
Probab=96.26 E-value=0.027 Score=61.43 Aligned_cols=97 Identities=13% Similarity=0.221 Sum_probs=74.3
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCH
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSS 1254 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 1254 (1321)
.+..+|..||+.++|.++.+++..++......-....+. +.+.+...|. .+....++|.+|..++.....
T Consensus 109 l~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~-d~efI~~~Fg---~~~~r~~ny~~f~Q~lh~~~~------ 178 (694)
T KOG0751|consen 109 LFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNW-DSEFIKLHFG---DIRKRHLNYAEFTQFLHEFQL------ 178 (694)
T ss_pred HHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccC-CcchHHHHhh---hHHHHhccHHHHHHHHHHHHH------
Confidence 478899999999999999999999998765432221222 3344554443 344567999999999977643
Q ss_pred HHHHHHHHHHccCCCCCcCHHHHHhhC
Q psy6493 1255 EEIENAFHAIAASDRPYVTKEELYANL 1281 (1321)
Q Consensus 1255 ~~~~~~F~~~D~~~~G~I~~~el~~~l 1281 (1321)
+..+.+|+..|+.++|+||.=+|+..|
T Consensus 179 E~~~qafr~~d~~~ng~is~Ldfq~im 205 (694)
T KOG0751|consen 179 EHAEQAFREKDKAKNGFISVLDFQDIM 205 (694)
T ss_pred HHHHHHHHHhcccCCCeeeeechHhhh
Confidence 668899999999999999999999865
No 123
>KOG0046|consensus
Probab=96.25 E-value=0.0095 Score=65.59 Aligned_cols=77 Identities=23% Similarity=0.414 Sum_probs=66.2
Q ss_pred hcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1165 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1165 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
.+.+|.+++.++...|...| |++|+|+..++..++...+... .....++++.++...+.+.+|.|+|++|+.++.
T Consensus 10 ~~~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~----g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~ 84 (627)
T KOG0046|consen 10 QSQLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPL----GYFVREEIKEILGEVGVDADGRVEFEEFVGIFL 84 (627)
T ss_pred cccccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccc----cchhHHHHHHHHhccCCCcCCccCHHHHHHHHH
Confidence 45688999999999999999 9999999999999998887653 112478899999999999999999999999765
Q ss_pred hh
Q psy6493 1245 SK 1246 (1321)
Q Consensus 1245 ~~ 1246 (1321)
..
T Consensus 85 ~l 86 (627)
T KOG0046|consen 85 NL 86 (627)
T ss_pred hh
Confidence 54
No 124
>PF13514 AAA_27: AAA domain
Probab=96.11 E-value=8.6 Score=51.41 Aligned_cols=319 Identities=12% Similarity=0.168 Sum_probs=145.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy6493 330 KTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQ 409 (1321)
Q Consensus 330 ~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~~~~~ 409 (1321)
....+...+..++.+...+................+-. ....+..+......+.... ..|+.......
T Consensus 148 ~~~~in~~l~~l~e~~~~l~~~~~~~~~y~~l~~~~~~--------~~~~~~~l~~~~~~l~~~~----~~ler~~~~~p 215 (1111)
T PF13514_consen 148 RKPEINQALKELKELERELREAEVRAAEYQELQQALEE--------AEEELEELRAELKELRAEL----RRLERLRRAWP 215 (1111)
T ss_pred CChHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHH----HHHHHHHHHhH
Confidence 34457777888888877777666555555444433321 2333333333333333322 22222223333
Q ss_pred HHHhHHHHHHHHHHHHHhhhhcccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCCCCHHHHHHHHHH
Q psy6493 410 FSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLAS 489 (1321)
Q Consensus 410 f~~~~~~l~~Wl~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~ 489 (1321)
++.....+...|..... ....+......+.....+...+...+......+..+......+... +..-.....+..
T Consensus 216 ~~~~~~~l~~~l~~l~~-~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~l~~~----~~ll~~~~~I~~ 290 (1111)
T PF13514_consen 216 LLAELQQLEAELAELGE-VPDFPEDGAERLEQLEEELAEAQAQLERLQEELAQLEEELDALPVD----EELLAHAAEIEA 290 (1111)
T ss_pred HHHHHHHHHHHHHhcCC-cCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----HHHHhhHHHHHH
Confidence 44444444444432210 1111111233444444555566666666666666665555444211 111223334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc---------CCC-CCCCHHHHHHHHHHHHHHHH
Q psy6493 490 IADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLT---------SED-SGKDLASVQNLIKKHQLVEA 559 (1321)
Q Consensus 490 l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~l~~WL~~~e~~L~---------~~~-~~~d~~~~~~~l~~~~~l~~ 559 (1321)
|..+...+..... ........+..+...+......|. ... .......+..+...+..+..
T Consensus 291 L~~~~~~~~~~~~----------dl~~~~~e~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~l~~ 360 (1111)
T PF13514_consen 291 LEEQRGEYRKARQ----------DLPRLEAELAELEAELRALLAQLGPDWDEEDLEALDPSLAARERIRELLQEREQLEQ 360 (1111)
T ss_pred HHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHhcCCCcccchhhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 4433322222111 122333334444444444444443 111 12233667777778888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc----C-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHhHHHHHH
Q psy6493 560 DIQAHDDRIKDMNGQADSLIDS----G-QFDASSIQEKRQSINERYERIKNLAAHRQARLNEANT-L-HQFFRDIADEES 632 (1321)
Q Consensus 560 ei~~~~~~v~~l~~~~~~L~~~----~-~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~-~-~~f~~~~~~~~~ 632 (1321)
.+......+.........+-.. + +.+...+...+.......+ +.. +.......+. . ......+..+-.
T Consensus 361 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~l~~al~~~~~~~d-~~~----~~~~~~~~~~~~~~~l~~~l~~L~~ 435 (1111)
T PF13514_consen 361 ALAQARRELEEAERELEQLQAELAALPAPPDPEALRAALEAAQRLGD-LEA----RLQEAEQALEAAERRLAAALAALGP 435 (1111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCcccCCChHHHHHHHHHHhccc-HHH----HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7777766666665555444222 1 1233345555554443321 222 2222222222 1 223344444445
Q ss_pred HHHHhhhhhcCCcCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHH
Q psy6493 633 WIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGE 682 (1321)
Q Consensus 633 Wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~ 682 (1321)
|-........ .++ ++...+......+..+...+......+..+.....
T Consensus 436 w~~~~~~l~~-~~~-P~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1111)
T PF13514_consen 436 WSGDLDALAA-LPL-PSRETVEAFRAEFEELERQLRRARDRLEELEEELA 483 (1111)
T ss_pred CCCChHHHhc-cCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6544433322 223 35567777777777777766666655555444433
No 125
>PF14658 EF-hand_9: EF-hand domain
Probab=96.05 E-value=0.012 Score=45.81 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=10.6
Q ss_pred HHHHHccCCCCCcCHHHHHhh
Q psy6493 1260 AFHAIAASDRPYVTKEELYAN 1280 (1321)
Q Consensus 1260 ~F~~~D~~~~G~I~~~el~~~ 1280 (1321)
+|..||+++.|.|...++...
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~ 23 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITY 23 (66)
T ss_pred chhhcCCcCCceEeHHHHHHH
Confidence 345555555555555555543
No 126
>KOG4065|consensus
Probab=95.90 E-value=0.011 Score=50.44 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=27.9
Q ss_pred hCCHhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHh
Q psy6493 1280 NLTKEMADYCVERMKPYVDPKTERGIPGALDYIEFTRT 1317 (1321)
Q Consensus 1280 ~l~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~ 1317 (1321)
..++.+...++..+++.-|.| +| |.|+|-||++.
T Consensus 109 l~sE~Ele~~iD~vL~DdDfN-~D---G~IDYgEflK~ 142 (144)
T KOG4065|consen 109 LSSEAELERLIDAVLDDDDFN-GD---GVIDYGEFLKR 142 (144)
T ss_pred CCCHHHHHHHHHHHhcccccC-CC---ceeeHHHHHhh
Confidence 345566777888888889999 99 99999999875
No 127
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=95.87 E-value=0.0042 Score=56.06 Aligned_cols=61 Identities=28% Similarity=0.452 Sum_probs=44.3
Q ss_pred HHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHH
Q psy6493 1173 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAF 1242 (1321)
Q Consensus 1173 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~ 1242 (1321)
...+.=.|..+|.|++|.|+..|+..+...+ .+ ...-+..++..+|.|+||.|++.||..+
T Consensus 53 ~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~-------~e~C~~~F~~~CD~n~d~~Is~~EW~~C 113 (113)
T PF10591_consen 53 KRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MP-------PEHCARPFFRSCDVNKDGKISLDEWCNC 113 (113)
T ss_dssp HHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--ST-------TGGGHHHHHHHH-TT-SSSEEHHHHHHH
T ss_pred hhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hh-------hHHHHHHHHHHcCCCCCCCCCHHHHccC
Confidence 3445667999999999999999998876544 23 4667899999999999999999999753
No 128
>PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules []. KAR9 localises at the shmoo tip in mating cells and at the tip of the growing bud in anaphase [].
Probab=95.82 E-value=7 Score=47.95 Aligned_cols=281 Identities=14% Similarity=0.110 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChh-HHHHH
Q psy6493 514 QRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDAS-SIQEK 592 (1321)
Q Consensus 514 ~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~-~l~~~ 592 (1321)
.......+.++..|+.+....|... ...+..+..-|......|+.-......+... .+.. .+.+.
T Consensus 31 ~~a~~~~~~qi~~Wi~k~k~~l~~L------------~~~l~~ID~ai~~~l~lIe~~v~~ie~~q~r--~di~~~~~dl 96 (683)
T PF08580_consen 31 VKALSGAAEQILDWIQKAKDVLYGL------------REGLEEIDSAISRFLDLIEVYVSAIEDLQLR--EDIANSLFDL 96 (683)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHH------------HHhHHHHHHHHHHHHHHHHhhcccccccccc--ccccccHHHH
Confidence 4556667778888888776554221 2222223333332222222222222211100 1111 23334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhHHHHHHHHHHhhhhhcCCcC-----CCCHHHHHHHH--
Q psy6493 593 RQSINERYERIKNLAAHRQARLNEANTLHQFF--------RDIADEESWIKEKKLLVGSDDY-----GRDLTGVQNLK-- 657 (1321)
Q Consensus 593 ~~~l~~~~~~l~~~~~~r~~~Le~~~~~~~f~--------~~~~~~~~Wl~~~~~~l~~~~~-----~~~~~~~~~~~-- 657 (1321)
.+.+.+.-..+...+...+..++-++.|.+.. .++++...++-+.+..-...++ ..+++.+-...
T Consensus 97 ~e~vsqm~~~vK~~L~~vK~qveiAmE~~EL~~~vlg~l~~EIe~~~~~vfemeE~R~~Sp~~~~lp~~~Le~Ive~~~~ 176 (683)
T PF08580_consen 97 IEEVSQMELDVKKTLISVKKQVEIAMEWEELWNDVLGDLDNEIEECIRLVFEMEEKRHSSPVRHGLPIFELETIVEEMPS 176 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccCCCcccHHHHHHhccc
Confidence 44444444466677777777777777665533 3344444455444332222211 22333333333
Q ss_pred ----------------------HHhHHHHHHHHhchHHHHHHHHHHHHhhhcC----CCCchHHHHHHHHHHHHHHHHHH
Q psy6493 658 ----------------------KKHKRLEAELASHQPAIQNVQETGEKLMDVS----NLGVPEIEQRLKLLNQAWSELKQ 711 (1321)
Q Consensus 658 ----------------------~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~----~~~~~~i~~~l~~l~~~w~~l~~ 711 (1321)
..+-+|..-|.-.+..++-|=..-..+-..+ +..++.|..+-..|..+|..|..
T Consensus 177 ~~~~~~~~~~lPtF~~~Desl~~~ll~L~arm~PLraSLdfLP~Ri~~F~~ra~~~fp~a~e~L~~r~~~L~~k~~~L~~ 256 (683)
T PF08580_consen 177 STNSSNKRFSLPTFSPQDESLYSSLLALFARMQPLRASLDFLPMRIEEFQSRAESIFPSACEELEDRYERLEKKWKKLEK 256 (683)
T ss_pred cCCCCcCCcCCCCCCcHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1333333333333333333333333332222 22456788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CC-CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Q psy6493 712 LAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLS---VE-DYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAG 787 (1321)
Q Consensus 712 ~~~~r~~~L~~~~~~~~f~~~~~el~~wl~~~e~~l~---~~-~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~ 787 (1321)
.+..-+..|-+.--..-|.....++..-+...+..+. .. +.+.....-..+-++...+...+..+-+.|-. ...
T Consensus 257 e~~~LK~ELiedRW~~vFr~l~~q~~~m~esver~~~kl~~~~~~~~~~~~~~~l~~~i~s~~~k~~~~~~~I~k--a~~ 334 (683)
T PF08580_consen 257 EAESLKKELIEDRWNIVFRNLGRQAQKMCESVERSLSKLQEAIDSGIHLDNPSKLSKQIESKEKKKSHYFPAIYK--ARV 334 (683)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHhccHHHHHH--HHH
Confidence 9888777664433225566666666666666666553 22 12222222222333333333333333222210 112
Q ss_pred hHhhhhcCCCchHHHHHHH-HHHHHHHHHH
Q psy6493 788 NKLIEAKNHHADSITQRCQ-QLQLKLDNLM 816 (1321)
Q Consensus 788 ~~L~~~~~~~~~~i~~~~~-~l~~~~~~l~ 816 (1321)
..++.. .|..++. .|..+|..|+
T Consensus 335 ~sIi~~------gv~~r~n~~L~~rW~~L~ 358 (683)
T PF08580_consen 335 LSIIDK------GVADRLNADLAQRWLELK 358 (683)
T ss_pred HHhhhh------hHHHHhhHHHHHHHHHHH
Confidence 223332 2667777 9999999986
No 129
>PRK02224 chromosome segregation protein; Provisional
Probab=95.71 E-value=11 Score=49.42 Aligned_cols=41 Identities=22% Similarity=0.386 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q psy6493 696 EQRLKLLNQAWSELKQLAANRGQKLDESL-TYQHFLAKVEEE 736 (1321)
Q Consensus 696 ~~~l~~l~~~w~~l~~~~~~r~~~L~~~~-~~~~f~~~~~el 736 (1321)
...+..+..+++.+......+...++... .+..+...+.++
T Consensus 508 ~~~l~~l~~~~~~l~~~~~~~~e~le~~~~~~~~l~~e~~~l 549 (880)
T PRK02224 508 EDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAEL 549 (880)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 55566666666666666666666555555 344455555444
No 130
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []. Located at the C terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). These proteins also contain four coiled-coil domains [].
Probab=95.27 E-value=11 Score=46.68 Aligned_cols=26 Identities=8% Similarity=0.285 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 552 KKHQLVEADIQAHDDRIKDMNGQADS 577 (1321)
Q Consensus 552 ~~~~~l~~ei~~~~~~v~~l~~~~~~ 577 (1321)
..++.++-.+......+..+......
T Consensus 514 s~i~~l~I~lEk~rek~~kl~~ql~k 539 (775)
T PF10174_consen 514 SEIERLEIELEKKREKHEKLEKQLEK 539 (775)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34455555666666666555554444
No 131
>KOG4666|consensus
Probab=95.20 E-value=0.03 Score=57.77 Aligned_cols=100 Identities=13% Similarity=0.072 Sum_probs=79.9
Q ss_pred HHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCC
Q psy6493 1174 KEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQS 1253 (1321)
Q Consensus 1174 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 1253 (1321)
..+...|..||.+++|.++..+....+.-+..++. +...++-.|+.|+.+.||.++-.+|..++.-. .+..
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~------t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~---lgv~ 329 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPV------TPVIIQYAFKRFSVAEDGISGEHILSLILQVV---LGVE 329 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCC------cHHHHHHHHHhcccccccccchHHHHHHHHHh---cCcc
Confidence 45788999999999999999988877766654432 66778889999999999999998887776432 2333
Q ss_pred HHHHHHHHHHHccCCCCCcCHHHHHhhCC
Q psy6493 1254 SEEIENAFHAIAASDRPYVTKEELYANLT 1282 (1321)
Q Consensus 1254 ~~~~~~~F~~~D~~~~G~I~~~el~~~l~ 1282 (1321)
.-.+-..|..++...+|.|+.++|++++.
T Consensus 330 ~l~v~~lf~~i~q~d~~ki~~~~f~~fa~ 358 (412)
T KOG4666|consen 330 VLRVPVLFPSIEQKDDPKIYASNFRKFAA 358 (412)
T ss_pred eeeccccchhhhcccCcceeHHHHHHHHH
Confidence 34466789999999999999999999653
No 132
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=95.18 E-value=0.63 Score=51.25 Aligned_cols=231 Identities=16% Similarity=0.176 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHhhhcccccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHHhhcccccCCchhHhH
Q psy6493 1060 LRKEFAKHANAFHQWLTET--RTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVG 1137 (1321)
Q Consensus 1060 ~~~~f~~~~~~l~~wl~~~--~~~~~~~~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1137 (1321)
...+|+..+..| |+... ...+.+--+++.+||.-++.+..-+..+..+...+.... .+++..+.|+-+...+
T Consensus 375 ~e~efear~~Tf--~l~~~~vsp~i~~l~gd~Rdql~~lq~l~k~l~p~tv~~~~vk~~~----asG~E~~rfka~en~n 448 (612)
T COG5069 375 AEGEFEARVFTF--WLNSLDVSPEITNLFGDLRDQLILLQALSKKLMPMTVTHKLVKKQP----ASGIEENRFKAFENEN 448 (612)
T ss_pred hhhHHHHHHHHH--HHHHhcCChhhhhhcccHHHHHHHHHHHHhhcCCceechhhhcccc----cccchhhhhhhhcccc
Confidence 455665555444 55444 334445588999999999888888877777766544433 3455566776655555
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCch
Q psy6493 1138 LAQQWDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP 1217 (1321)
Q Consensus 1138 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 1217 (1321)
+......-.-..--....+|.....+....+....+.....+|.++-+.+...++..+|..++.++|.... ..+
T Consensus 449 yavdlG~~~gf~~v~ik~le~~~~~r~k~tl~~q~l~~~t~~f~h~lkk~~~~lsdsd~~a~l~slgl~~d------k~e 522 (612)
T COG5069 449 YAVDLGITEGFSLVGIKGLEILDGIRLKLTLVWQVLRSNTALFNHVLKKDGCGLSDSDLCAWLGSLGLKGD------KEE 522 (612)
T ss_pred hhhhhhhhcCeeeeeechhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhccccC------Ccc
Confidence 54333221111111122333333333444444556666778888887666667999999999999997751 222
Q ss_pred HHHHHHHhcCCCCCc-cccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCC---cCHHHHHhhCCHhhHHHHHHcC
Q psy6493 1218 EFEAILDLVDPNRDG-HVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPY---VTKEELYANLTKEMADYCVERM 1293 (1321)
Q Consensus 1218 ~~~~~~~~~d~~~~g-~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~---I~~~el~~~l~~~~~~~~~~~~ 1293 (1321)
.+. .| .|++++. .+.|..|+..+..- ....+.+...|..||.=.+|. |+.+-+++.. .++.-+
T Consensus 523 gi~-~F--~~~a~s~~gv~yl~v~~~i~se----l~D~d~v~~~~~~f~diad~rsl~is~~ilRs~~------aii~~l 589 (612)
T COG5069 523 GIR-SF--GDPAGSVSGVFYLDVLKGIHSE----LVDYDLVTRGFTEFDDIADARSLAISSKILRSLG------AIIKFL 589 (612)
T ss_pred cee-ec--cCCccccccchHHHHHHHHhhh----hcChhhhhhhHHHHHHhhhhhhhhccHHHHHHhh------hHheec
Confidence 232 22 2333333 46777777665432 334566777777775423332 3333333321 111111
Q ss_pred CCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1294 KPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1294 ~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
. -|.| +- ..+++|..|+..++.
T Consensus 590 p--e~in-~~--r~~Ldvltfi~slma 611 (612)
T COG5069 590 P--EDIN-GV--RPRLDVLTFIESLMA 611 (612)
T ss_pred h--hhhc-cc--CccchHHHHHHHHhc
Confidence 1 2334 21 268999999988764
No 133
>KOG0996|consensus
Probab=95.17 E-value=13 Score=46.80 Aligned_cols=84 Identities=11% Similarity=0.122 Sum_probs=47.9
Q ss_pred HHHHHhcHHHHHHHHHHhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhH
Q psy6493 450 EAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEAN-KQRTYIAAVKDLDFWL 528 (1321)
Q Consensus 450 ~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~-~~~~~~~~~~~l~~WL 528 (1321)
+.++...................... .....+...+..+...|..+...+.+....++-+- .+..+....+....-+
T Consensus 446 ~~ei~~L~~~~~~~~~~l~e~~~~l~--~~t~~~~~e~~~~ekel~~~~~~~n~~~~e~~vaesel~~L~~~~~~~~~~~ 523 (1293)
T KOG0996|consen 446 QTEIEQLEELLEKEERELDEILDSLK--QETEGIREEIEKLEKELMPLLKQVNEARSELDVAESELDILLSRHETGLKKV 523 (1293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444443332 23456777788888888877777776666666554 3555555555555555
Q ss_pred HHHHHhh
Q psy6493 529 GEVESLL 535 (1321)
Q Consensus 529 ~~~e~~L 535 (1321)
.++...|
T Consensus 524 e~lk~~L 530 (1293)
T KOG0996|consen 524 EELKGKL 530 (1293)
T ss_pred HHHHHHH
Confidence 5555444
No 134
>KOG1029|consensus
Probab=94.47 E-value=0.22 Score=57.72 Aligned_cols=130 Identities=16% Similarity=0.278 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhh
Q psy6493 1168 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKE 1247 (1321)
Q Consensus 1168 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 1247 (1321)
+|+++.......|..+-+.+ |+||-..-+.++-..|++. ..+..++...|.|.||+++..||.-.|.-.
T Consensus 10 vT~~Er~K~~~qF~~Lkp~~-gfitg~qArnfflqS~LP~---------~VLaqIWALsDldkDGrmdi~EfSIAmkLi- 78 (1118)
T KOG1029|consen 10 VTDEERQKHDAQFGQLKPGQ-GFITGDQARNFFLQSGLPT---------PVLAQIWALSDLDKDGRMDIREFSIAMKLI- 78 (1118)
T ss_pred cchHHHHHHHHHHhccCCCC-CccchHhhhhhHHhcCCCh---------HHHHHHHHhhhcCccccchHHHHHHHHHHH-
Q ss_pred hcccCCHHH-----------------------------------------------------------------------
Q psy6493 1248 TENVQSSEE----------------------------------------------------------------------- 1256 (1321)
Q Consensus 1248 ~~~~~~~~~----------------------------------------------------------------------- 1256 (1321)
..
T Consensus 79 -------~lkLqG~~lP~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~s 151 (1118)
T KOG1029|consen 79 -------KLKLQGIQLPPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNS 151 (1118)
T ss_pred -------HHHhcCCcCCCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCC
Q ss_pred ---------------------------------------------HHHHHHHHccCCCCCcCHHHHHhhCCHhhH-HHHH
Q psy6493 1257 ---------------------------------------------IENAFHAIAASDRPYVTKEELYANLTKEMA-DYCV 1290 (1321)
Q Consensus 1257 ---------------------------------------------~~~~F~~~D~~~~G~I~~~el~~~l~~~~~-~~~~ 1290 (1321)
.+..|..+|+..+||+|-..=+.+|....+ ...+
T Consensus 152 l~nGplp~~~~spl~~~ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~Lpq~~L 231 (1118)
T KOG1029|consen 152 LPNGPLPPTSNSPLPHDSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQSGLPQNQL 231 (1118)
T ss_pred CCCCCCCCCCCCCCCCCcchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHhcCCchhhH
Q ss_pred HcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1291 ERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1291 ~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
.+|....|.| || |+++-+||+-.|+
T Consensus 232 A~IW~LsDvd-~D---GkL~~dEfilam~ 256 (1118)
T KOG1029|consen 232 AHIWTLSDVD-GD---GKLSADEFILAMH 256 (1118)
T ss_pred hhheeeeccC-CC---CcccHHHHHHHHH
No 135
>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells. Laminins are trimeric molecules; laminin-1 is an alpha1 beta1 gamma1 trimer. It has been suggested that the domains I and II from laminin A, B1 and B2 may come together to form a triple helical coiled-coil structure []. Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organisation of cells into tissues during embryonic development by interacting with other extracellular matrix components.; GO: 0005102 receptor binding, 0030155 regulation of cell adhesion, 0030334 regulation of cell migration, 0045995 regulation of embryonic development, 0005606 laminin-1 complex
Probab=94.24 E-value=9.6 Score=41.16 Aligned_cols=134 Identities=13% Similarity=0.189 Sum_probs=74.6
Q ss_pred cCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q psy6493 645 DYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKL-LNQAWSELKQLAANRGQKLDES 723 (1321)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l~~-l~~~w~~l~~~~~~r~~~L~~~ 723 (1321)
..+.+...+...+...+.+..+|..+. +......++.-.. .+..+-.++.. +...|.....+...-..
T Consensus 117 ~~~~~~~~l~~~l~ea~~mL~emr~r~--f~~~~~~Ae~El~----~A~~LL~~v~~~~~~~~~~~~~l~~~i~~----- 185 (264)
T PF06008_consen 117 GDQLPSEDLQRALAEAQRMLEEMRKRD--FTPQRQNAEDELK----EAEDLLSRVQKWFQKPQQENESLAEAIRD----- 185 (264)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhcc--chhHHHHHHHHHH----HHHHHHHHHHHHHhhHHHhhHHHHHHHHH-----
Confidence 345556778888888888888887763 4444444432221 11111111211 23333333333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhh
Q psy6493 724 LTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIE 792 (1321)
Q Consensus 724 ~~~~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~ 792 (1321)
.+.+|...+.++..||.++........ .=....+..+..++.-..+|......+......|..++.
T Consensus 186 -~L~~~~~kL~Dl~~~l~eA~~~~~ea~--~ln~~n~~~l~~~~~k~~~l~~~~~~~~~~L~~a~~~L~ 251 (264)
T PF06008_consen 186 -DLNDYNAKLQDLRDLLNEAQNKTREAE--DLNRANQKNLEDLEKKKQELSEQQNEVSETLKEAEDLLD 251 (264)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346799999999999999888765421 112233445556666666666666777777767766554
No 136
>KOG4065|consensus
Probab=94.23 E-value=0.041 Score=47.04 Aligned_cols=75 Identities=24% Similarity=0.362 Sum_probs=47.7
Q ss_pred cCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHc------CCCC-CcccCCCCchHHHHHHHhcCCCCCccccHHH
Q psy6493 1166 SGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRAL------GYDL-PMVEEGQPDPEFEAILDLVDPNRDGHVSLQE 1238 (1321)
Q Consensus 1166 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~------~~~~-~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~e 1238 (1321)
..+|++++. ...|...|-|++|+|+--|+..++.-. |..+ +..++......+..+++.-|.++||.|+|.|
T Consensus 61 a~mtpeqlq--fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgE 138 (144)
T KOG4065|consen 61 AKMTPEQLQ--FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGE 138 (144)
T ss_pred hhCCHHHHh--hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHH
Confidence 345666664 246888999999999999999988543 3222 1111111223334445556788888899888
Q ss_pred HHHH
Q psy6493 1239 YMAF 1242 (1321)
Q Consensus 1239 f~~~ 1242 (1321)
|...
T Consensus 139 flK~ 142 (144)
T KOG4065|consen 139 FLKR 142 (144)
T ss_pred HHhh
Confidence 8753
No 137
>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells. Laminins are trimeric molecules; laminin-1 is an alpha1 beta1 gamma1 trimer. It has been suggested that the domains I and II from laminin A, B1 and B2 may come together to form a triple helical coiled-coil structure []. Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organisation of cells into tissues during embryonic development by interacting with other extracellular matrix components.; GO: 0005102 receptor binding, 0030155 regulation of cell adhesion, 0030334 regulation of cell migration, 0045995 regulation of embryonic development, 0005606 laminin-1 complex
Probab=93.67 E-value=12 Score=40.37 Aligned_cols=190 Identities=14% Similarity=0.174 Sum_probs=101.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHhHHHHHHHHHHHHhhcCC---CCCCCChHHHHHHHHHHHHH
Q psy6493 57 KIQTQLQDLNQKWTSLQQLTAERATQLGSAHE-VQRFHRDVDETKDWIQEKDEALNN---NDLGKDLRSVQALQRKHEGL 132 (1321)
Q Consensus 57 ~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~l~-~~~f~~~~~~~~~wl~~~e~~l~~---~~~~~~~~~~~~~~~~~~~l 132 (1321)
.|...+..|..+-..............+..+. .+.....+..+..-+.+.-..+.. ...+.+...+...+..-+.+
T Consensus 56 ~L~~d~~~L~~k~~~~~~~~~~l~~~t~~t~~~a~~L~~~i~~l~~~i~~l~~~~~~l~~~~~~~~~~~l~~~l~ea~~m 135 (264)
T PF06008_consen 56 SLEQDVENLQEKATKVSRKAQQLNNNTERTLQRAQDLEQFIQNLQDNIQELIEQVESLNENGDQLPSEDLQRALAEAQRM 135 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHHHH
Confidence 45566666666666666666666655555553 455555555555555555544433 22345556677777777777
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHhCCCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHH
Q psy6493 133 ERDLAALGDKIRQLDETANRLMQTHPETAEQTYAKQKE-INEEWTQLTAKANTRKEKLLDSYD-LQRFLSDYRDLMSWIN 210 (1321)
Q Consensus 133 ~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~-l~~~w~~l~~~~~~r~~~L~~~~~-~~~f~~~~~~l~~wl~ 210 (1321)
..+|.... +......|..=. ..+..+-.++.. +...|....... ..... +..|...+.++..||.
T Consensus 136 L~emr~r~--f~~~~~~Ae~El----~~A~~LL~~v~~~~~~~~~~~~~l~-------~~i~~~L~~~~~kL~Dl~~~l~ 202 (264)
T PF06008_consen 136 LEEMRKRD--FTPQRQNAEDEL----KEAEDLLSRVQKWFQKPQQENESLA-------EAIRDDLNDYNAKLQDLRDLLN 202 (264)
T ss_pred HHHHHhcc--chhHHHHHHHHH----HHHHHHHHHHHHHHhhHHHhhHHHH-------HHHHHHHHHHHHHHHHHHHHHH
Confidence 66665542 333333322111 012222222222 233333333222 22333 6788999999999999
Q ss_pred HHhhhccCCcccCCH-HHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHhc
Q psy6493 211 SMMGLVSSDELANDV-TGAEALLERHQEHRTEIDARTGTFQAFDLFGQQLLQS 262 (1321)
Q Consensus 211 ~~e~~l~~~~~~~~~-~~~~~~l~~~~~l~~el~~~~~~~~~l~~~g~~l~~~ 262 (1321)
++....... .++ ......+..++.-..++......+......|..++..
T Consensus 203 eA~~~~~ea---~~ln~~n~~~l~~~~~k~~~l~~~~~~~~~~L~~a~~~L~~ 252 (264)
T PF06008_consen 203 EAQNKTREA---EDLNRANQKNLEDLEKKKQELSEQQNEVSETLKEAEDLLDQ 252 (264)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987666431 112 1234445555666666666666666666666665543
No 138
>KOG0971|consensus
Probab=93.45 E-value=23 Score=42.95 Aligned_cols=57 Identities=11% Similarity=0.174 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhHHHHHHhhc
Q psy6493 480 EEAVQARLASIADQWEFLTQKTTEKSLKLKEANK-------QRTYIAAVKDLDFWLGEVESLLT 536 (1321)
Q Consensus 480 ~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~-------~~~~~~~~~~l~~WL~~~e~~L~ 536 (1321)
...+...+..+..-.+.+......-...|+.... .+.+...+..+...+..+...|.
T Consensus 756 ~q~~~d~iasl~A~ld~~~vnt~r~~~flQe~~eatds~~llq~Lne~~~a~rq~~kki~RrLp 819 (1243)
T KOG0971|consen 756 TQQLADHIASLQAALDCMSVNTGRLRAFLQEGQEATDSALLLQDLNESCSAIRQFCKKIRRRLP 819 (1243)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3445555555555555555444444444444332 34455566666666666666664
No 139
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.
Probab=93.10 E-value=47 Score=45.44 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhHHhhh
Q psy6493 800 SITQRCQQLQLKLDNLMALATKRKTKLMDNS--AYLQFMWKADVVESWIADKETHV 853 (1321)
Q Consensus 800 ~i~~~~~~l~~~~~~l~~~~~~r~~~Le~~~--~~~~~~~~~~~l~~wl~~~e~~l 853 (1321)
.+..++..+...+.++......-...++..- ....|...+..+...+...-..|
T Consensus 983 ~~~~~~~~l~~q~~dl~~~~~~l~~~i~~l~~~~~~~f~~~f~~~~~~f~~~~~~l 1038 (1164)
T TIGR02169 983 EVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEAINENFNEIFAEL 1038 (1164)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555544444333333221 23345555555555555554444
No 140
>KOG1955|consensus
Probab=92.79 E-value=0.23 Score=54.38 Aligned_cols=70 Identities=20% Similarity=0.343 Sum_probs=62.5
Q ss_pred CCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1167 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1167 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
.|++++..++..-|+.+-.|-.|+|+-.--+.++.+..+.+ .++..|+..+|.+.||.+++.||+..+..
T Consensus 224 ~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKSklpi---------~ELshIWeLsD~d~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKSKLPI---------EELSHIWELSDVDRDGALTLSEFCAAFHL 293 (737)
T ss_pred ccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhhccCch---------HHHHHHHhhcccCccccccHHHHHhhHhh
Confidence 46889999999999999999999999999999988766654 68999999999999999999999988754
No 141
>PF14643 DUF4455: Domain of unknown function (DUF4455)
Probab=92.57 E-value=27 Score=41.36 Aligned_cols=207 Identities=12% Similarity=0.160 Sum_probs=96.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHh-HHHHHHHHHHhhhhhcCCcCCCCHHHHHHHHHH-hH
Q psy6493 585 DASSIQEKRQSINERYERIKNLAAHRQARLNEANT-LHQFFRD-IADEESWIKEKKLLVGSDDYGRDLTGVQNLKKK-HK 661 (1321)
Q Consensus 585 ~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~-~~~f~~~-~~~~~~Wl~~~~~~l~~~~~~~~~~~~~~~~~~-~~ 661 (1321)
+..-+.-....|..-|+.|......|...+...-. +...... .+.+..-|......+.... ...+.++...+.+ ..
T Consensus 59 d~~l~~~~~~~l~~~w~~v~~~~~~r~~~I~~l~~~L~~~E~~R~~~l~~~l~~~~~~L~~ia-~~~~~dv~rli~~ea~ 137 (473)
T PF14643_consen 59 DSALLEYSIQDLLELWDEVAEHSQKRKQWIKELDEDLEELEKERADKLKKVLRKYVEILEKIA-HLLPPDVERLIEKEAM 137 (473)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHHHHHH
Confidence 43456666788899999999988888887776555 4443322 2223333333322222111 1222344444433 22
Q ss_pred HHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 662 RLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWIS 741 (1321)
Q Consensus 662 ~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~el~~wl~ 741 (1321)
.+...+-+..-.+..+.. .|.. ..+... .....+|......|..-+ +... |.
T Consensus 138 ~iN~~ll~Nrra~a~L~~---~L~~------~~~~~e-~~~~~~w~~~~~~Wr~l~-----------~~~~-------i~ 189 (473)
T PF14643_consen 138 EINQALLGNRRAYADLFA---NLME------AELQRE-LSYRRRWQDRVDDWRALR-----------HERA-------IQ 189 (473)
T ss_pred HHHHHHHHhHHHHHHHHH---HHHH------HHHHHH-HHHHHHHHHHHHHHHHHh-----------HHHH-------HH
Confidence 333334333333332222 2221 122222 244445555444443221 1121 12
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhhcCCC--chHHHHH---HHHHHHHHHHHH
Q psy6493 742 EKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHH--ADSITQR---CQQLQLKLDNLM 816 (1321)
Q Consensus 742 ~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~--~~~i~~~---~~~l~~~~~~l~ 816 (1321)
.....+.+ +...+|+.+...+..+...+..+.... +.-|...+ ...||. .+.+..+ +..++..|+..+
T Consensus 190 ~f~~~~~s-~~~~~P~~~~~~~e~~~~~Q~~l~~~r--~~~L~~l~----~l~Pp~~t~~~v~eW~~~l~~l~~~~d~~~ 262 (473)
T PF14643_consen 190 EFREFMAS-EEFQNPPERKQLLEQMRKEQVDLHEKR--LELLQSLC----DLLPPNLTKEKVEEWYASLNALNEQIDEYH 262 (473)
T ss_pred HHHHHhCc-cccCCChHHHHHHHHHHHHHHHHHHHH--HHHHHHhh----cCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223444 444677888888888887777775432 22222222 222222 2334444 455555555555
Q ss_pred HHHHHHHHHHH
Q psy6493 817 ALATKRKTKLM 827 (1321)
Q Consensus 817 ~~~~~r~~~Le 827 (1321)
..+..+...+.
T Consensus 263 ~~~~~~lr~~~ 273 (473)
T PF14643_consen 263 QQCMEKLRALY 273 (473)
T ss_pred HHHHHHHHHHH
Confidence 55555554443
No 142
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.41 E-value=0.1 Score=33.33 Aligned_cols=27 Identities=44% Similarity=0.743 Sum_probs=24.3
Q ss_pred HHHhhhhccccCcCCCChHHHHHHHHH
Q psy6493 1176 FSMMFKHFDKDKSGKLNQTEFKSCLRA 1202 (1321)
Q Consensus 1176 ~~~~F~~~D~~~~g~i~~~e~~~~l~~ 1202 (1321)
+..+|..+|.+++|.|+..+|..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 677899999999999999999998865
No 143
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=92.02 E-value=0.31 Score=43.12 Aligned_cols=61 Identities=15% Similarity=0.322 Sum_probs=49.6
Q ss_pred hHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCC
Q psy6493 1217 PEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLT 1282 (1321)
Q Consensus 1217 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~ 1282 (1321)
.....+|...+. ++|.|+-..-..++.. ...+.+.+..++...|.|++|+++.+||.-+|.
T Consensus 10 ~~y~~~F~~l~~-~~g~isg~~a~~~f~~----S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 10 QKYDQIFQSLDP-QDGKISGDQAREFFMK----SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp HHHHHHHHCTSS-STTEEEHHHHHHHHHH----TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHhcCC-CCCeEeHHHHHHHHHH----cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence 456678888875 6799999999988754 367789999999999999999999999998653
No 144
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=91.55 E-value=0.12 Score=32.96 Aligned_cols=23 Identities=17% Similarity=0.167 Sum_probs=13.2
Q ss_pred HHHHHHHccCCCCCcCHHHHHhh
Q psy6493 1258 ENAFHAIAASDRPYVTKEELYAN 1280 (1321)
Q Consensus 1258 ~~~F~~~D~~~~G~I~~~el~~~ 1280 (1321)
..+|..+|.+++|+|+..+|...
T Consensus 3 ~~~f~~~d~~~~g~i~~~e~~~~ 25 (29)
T smart00054 3 KEAFRLFDKDGDGKIDFEEFKDL 25 (29)
T ss_pred HHHHHHHCCCCCCcEeHHHHHHH
Confidence 44556666666666666655544
No 145
>KOG0046|consensus
Probab=91.42 E-value=0.17 Score=56.17 Aligned_cols=60 Identities=20% Similarity=0.342 Sum_probs=45.5
Q ss_pred HHHHHHHHHccCCCCCcCHHHHHhhCCHhh------HHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1256 EIENAFHAIAASDRPYVTKEELYANLTKEM------ADYCVERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1256 ~~~~~F~~~D~~~~G~I~~~el~~~l~~~~------~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
.+...|..+| |++|+|+..++...+.... ..+.+..++...++| .+ |+|+|++|+..+++
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~-~~---g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVD-AD---GRVEFEEFVGIFLN 85 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCC-cC---CccCHHHHHHHHHh
Confidence 4677899999 9999999999988654322 245555666678888 77 99999999987653
No 146
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=91.21 E-value=0.34 Score=35.59 Aligned_cols=47 Identities=15% Similarity=0.106 Sum_probs=34.1
Q ss_pred cccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhC
Q psy6493 1233 HVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANL 1281 (1321)
Q Consensus 1233 ~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l 1281 (1321)
+++|.|...++..+. -......+..+|+..|++++|.+..+||..++
T Consensus 1 kmsf~Evk~lLk~~N--I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMN--IEMDDEYARQLFQECDKSQSGRLEGEEFEEFY 47 (51)
T ss_dssp EBEHHHHHHHHHHTT------HHHHHHHHHHH-SSSSSEBEHHHHHHHH
T ss_pred CCCHHHHHHHHHHHc--cCcCHHHHHHHHHHhcccCCCCccHHHHHHHH
Confidence 367888888876543 34566788999999999999999999998653
No 147
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=90.70 E-value=0.14 Score=46.25 Aligned_cols=24 Identities=13% Similarity=0.195 Sum_probs=10.6
Q ss_pred HHHHHHHHHccCCCCCcCHHHHHh
Q psy6493 1256 EIENAFHAIAASDRPYVTKEELYA 1279 (1321)
Q Consensus 1256 ~~~~~F~~~D~~~~G~I~~~el~~ 1279 (1321)
.+.--|..+|.|+||+|+..|+..
T Consensus 55 ~~~W~F~~LD~n~d~~L~~~El~~ 78 (113)
T PF10591_consen 55 VVHWKFCQLDRNKDGVLDRSELKP 78 (113)
T ss_dssp HHHHHHHHH--T-SSEE-TTTTGG
T ss_pred hhhhhHhhhcCCCCCccCHHHHHH
Confidence 344445555555555555555555
No 148
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=90.06 E-value=3 Score=40.08 Aligned_cols=31 Identities=29% Similarity=0.504 Sum_probs=25.4
Q ss_pred HHhhhhccccCcCCCChHHHHHHHHHcCCCC
Q psy6493 1177 SMMFKHFDKDKSGKLNQTEFKSCLRALGYDL 1207 (1321)
Q Consensus 1177 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~ 1207 (1321)
++=..-||.|+||.|.+-|-...++.+|+++
T Consensus 10 QqHvaFFDrd~DGiI~P~dTy~GFraLGf~~ 40 (174)
T PF05042_consen 10 QQHVAFFDRDKDGIIYPWDTYQGFRALGFGI 40 (174)
T ss_pred hhhhceeCCCCCeeECHHHHHHHHHHhCCCH
Confidence 3334458999999999999999898888876
No 149
>PF14643 DUF4455: Domain of unknown function (DUF4455)
Probab=89.70 E-value=51 Score=39.17 Aligned_cols=346 Identities=13% Similarity=0.145 Sum_probs=163.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHH-HHH
Q psy6493 268 VEIQDKLGNLAEAREDLEKAWIARRMQLDQCLEL--QLFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKH-EDF 344 (1321)
Q Consensus 268 ~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~--~~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~-~~l 344 (1321)
.-+......|..-|+.+......|...+...-.. ..-....+.+..-|...-..|..... ..++++..++.+. ..+
T Consensus 61 ~l~~~~~~~l~~~w~~v~~~~~~r~~~I~~l~~~L~~~E~~R~~~l~~~l~~~~~~L~~ia~-~~~~dv~rli~~ea~~i 139 (473)
T PF14643_consen 61 ALLEYSIQDLLELWDEVAEHSQKRKQWIKELDEDLEELEKERADKLKKVLRKYVEILEKIAH-LLPPDVERLIEKEAMEI 139 (473)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCcHHHHHHHHHHHHHH
Confidence 4567777888899999999998888888876542 44445566666667666666544331 2344555555443 334
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHH
Q psy6493 345 DKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEK 424 (1321)
Q Consensus 345 ~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~Wl~~~ 424 (1321)
...+-+.+..+..+...-.. ..+. .-.....+|......+..- ++...+..+..
T Consensus 140 N~~ll~Nrra~a~L~~~L~~---------~~~~-~e~~~~~~w~~~~~~Wr~l-----------~~~~~i~~f~~----- 193 (473)
T PF14643_consen 140 NQALLGNRRAYADLFANLME---------AELQ-RELSYRRRWQDRVDDWRAL-----------RHERAIQEFRE----- 193 (473)
T ss_pred HHHHHHhHHHHHHHHHHHHH---------HHHH-HHHHHHHHHHHHHHHHHHH-----------hHHHHHHHHHH-----
Confidence 44444444444333322111 0111 1123344455444433211 11111222222
Q ss_pred HHhhhhcccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCCCCHHHH---HHHHHHHHHHHHHHHHHH
Q psy6493 425 LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAV---QARLASIADQWEFLTQKT 501 (1321)
Q Consensus 425 ~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~i---~~~l~~l~~~w~~l~~~~ 501 (1321)
.+.++...+|......+..+..-+..+.... ..++.....+. ||+.....+ ...+..++..|+.....+
T Consensus 194 --~~~s~~~~~P~~~~~~~e~~~~~Q~~l~~~r---~~~L~~l~~l~---Pp~~t~~~v~eW~~~l~~l~~~~d~~~~~~ 265 (473)
T PF14643_consen 194 --FMASEEFQNPPERKQLLEQMRKEQVDLHEKR---LELLQSLCDLL---PPNLTKEKVEEWYASLNALNEQIDEYHQQC 265 (473)
T ss_pred --HhCccccCCChHHHHHHHHHHHHHHHHHHHH---HHHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233456678888888877766666665322 22333333332 333334333 455667777777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHH
Q psy6493 502 TEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKK---------HQLVEADIQAHDDRIKDMN 572 (1321)
Q Consensus 502 ~~r~~~L~~~~~~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~---------~~~l~~ei~~~~~~v~~l~ 572 (1321)
..+...+.+.. +..+...++.+.. .|..... .+.+.+...+.. +..+..+++.....++.+.
T Consensus 266 ~~~lr~~~E~~-~~ec~~~ve~~k~-------~L~~~~~-~~~eea~~lv~~~~~plv~~~q~~~e~~le~l~~~~E~~a 336 (473)
T PF14643_consen 266 MEKLRALYEKI-CQECLALVEKLKQ-------ELLDWKA-CTEEEAEELVNPEFLPLVGELQSEFEEELEKLDKSFEELA 336 (473)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHH-------HHHHhcC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65544444332 2223333333322 2221111 122233222221 1222222222222222221
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHhHHHHHHHHHHhhhhhcCCcCCCCH
Q psy6493 573 GQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANT-L-HQFFRDIADEESWIKEKKLLVGSDDYGRDL 650 (1321)
Q Consensus 573 ~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~-~-~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~ 650 (1321)
..- ......+..=+..+...|+.-...+......++..+. . ..+.........-|+.....+... ++.
T Consensus 337 ~~~-------~~~~~~L~~f~~~~~~lwd~h~~~l~~~e~~l~~~l~~~r~~~~~~~q~~E~~Ld~~~d~lRq~---s~e 406 (473)
T PF14643_consen 337 KQT-------EAQSEDLFKFFQEAAQLWDEHRKKLSKQEEELEKRLEQCREKHDQENQEKEAKLDIALDRLRQA---SSE 406 (473)
T ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhC---CCH
Confidence 111 1122345555566666666666666666666665555 2 335555555555555555555432 233
Q ss_pred HHHHHHHHHhHHHHHHH
Q psy6493 651 TGVQNLKKKHKRLEAEL 667 (1321)
Q Consensus 651 ~~~~~~~~~~~~l~~ei 667 (1321)
+.+...+.+...+...|
T Consensus 407 e~L~~~l~~~~~~Ld~I 423 (473)
T PF14643_consen 407 EKLKEHLEKALDLLDQI 423 (473)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444444333
No 150
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=89.55 E-value=0.45 Score=40.55 Aligned_cols=63 Identities=16% Similarity=0.230 Sum_probs=46.0
Q ss_pred HHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccC----CCCCcCHHHHHhhC
Q psy6493 1218 EFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAAS----DRPYVTKEELYANL 1281 (1321)
Q Consensus 1218 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~----~~G~I~~~el~~~l 1281 (1321)
++..+|..+.. +.+.++.++|..|+.........+...+..+|..|.++ ..|.+|.+.|..+|
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL 67 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFL 67 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHH
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHH
Confidence 36778888865 67899999999999776544455678888888887544 35777777777654
No 151
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]
Probab=89.13 E-value=1e+02 Score=41.78 Aligned_cols=66 Identities=15% Similarity=0.147 Sum_probs=38.5
Q ss_pred CCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH-HHHHHHHHHHHHHHHHHHHHhh
Q psy6493 1017 GPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDAL-RKEFAKHANAFHQWLTETRTSM 1082 (1321)
Q Consensus 1017 ~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~-~~~f~~~~~~l~~wl~~~~~~~ 1082 (1321)
+.++......+.+..++..|.....+-.............++.. ...|..+...+..-+..+-..+
T Consensus 963 ~VN~~Aiee~e~~~~r~~~l~~~~~dl~~a~~~l~~~i~~~d~~~~~~f~~~f~~In~~F~~if~~L 1029 (1163)
T COG1196 963 PVNLRAIEEYEEVEERYEELKSQREDLEEAKEKLLEVIEELDKEKRERFKETFDKINENFSEIFKEL 1029 (1163)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566777888888888888777766655555544444433333 2345555555555555543333
No 152
>PLN02952 phosphoinositide phospholipase C
Probab=88.28 E-value=1.4 Score=52.38 Aligned_cols=86 Identities=14% Similarity=0.177 Sum_probs=59.5
Q ss_pred CCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHh---------hHHHHHHcCCCCCC--
Q psy6493 1230 RDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKE---------MADYCVERMKPYVD-- 1298 (1321)
Q Consensus 1230 ~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~---------~~~~~~~~~~~~~d-- 1298 (1321)
+.|.++|.+|..|...+......+..++..+|..|.. +.+.++.++|..+|... .+..++..++....
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 4589999999988765533344577899999999974 55789999999988532 22334443332211
Q ss_pred -CCCCCCCCCCcchHHHHHhhhc
Q psy6493 1299 -PKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1299 -~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
.. +. +.++++.|..+|++
T Consensus 92 ~~~-~~---~~l~~~~F~~~l~s 110 (599)
T PLN02952 92 TRY-TR---HGLNLDDFFHFLLY 110 (599)
T ss_pred ccc-cc---cCcCHHHHHHHHcC
Confidence 11 22 56999999999975
No 153
>PF13514 AAA_27: AAA domain
Probab=88.17 E-value=1.1e+02 Score=41.16 Aligned_cols=313 Identities=14% Similarity=0.173 Sum_probs=140.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhH
Q psy6493 117 KDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRLMQTHPETAEQTYAKQKEINEEWTQLTAKANTR---KEKLLDSY 193 (1321)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~w~~l~~~~~~r---~~~L~~~~ 193 (1321)
+.-+.+...+..++.+...+.............-. .+.....++..+....... ...|+...
T Consensus 147 g~~~~in~~l~~l~e~~~~l~~~~~~~~~y~~l~~---------------~~~~~~~~~~~l~~~~~~l~~~~~~ler~~ 211 (1111)
T PF13514_consen 147 GRKPEINQALKELKELERELREAEVRAAEYQELQQ---------------ALEEAEEELEELRAELKELRAELRRLERLR 211 (1111)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456777888888887777666555554444333 3333333343333333332 22333333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCccc-CCHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHhcCCCCChHHHH
Q psy6493 194 DLQRFLSDYRDLMSWINSMMGLVSSDELA-NDVTGAEALLERHQEHRTEIDARTGTFQAFDLFGQQLLQSGHYASVEIQD 272 (1321)
Q Consensus 194 ~~~~f~~~~~~l~~wl~~~e~~l~~~~~~-~~~~~~~~~l~~~~~l~~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~ 272 (1321)
...-+......+...|..... .+.+| ...........+.......+......+..+...-..+... +..-....
T Consensus 212 ~~~p~~~~~~~l~~~l~~l~~---~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~l~~~--~~ll~~~~ 286 (1111)
T PF13514_consen 212 RAWPLLAELQQLEAELAELGE---VPDFPEDGAERLEQLEEELAEAQAQLERLQEELAQLEEELDALPVD--EELLAHAA 286 (1111)
T ss_pred HHhHHHHHHHHHHHHHHhcCC---cCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--HHHHhhHH
Confidence 333334444444444433321 12233 3344566666666677777776666666665544443111 11112344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhc---------cCC-CCCCHHHHHHHHHHHH
Q psy6493 273 KLGNLAEAREDLEKAWIARRMQLDQCLELQLFYRDCEQAENWMSAREAFLN---------AEE-VDSKTDNVEALIKKHE 342 (1321)
Q Consensus 273 ~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~---------~~~-~~~~~~~~~~~l~~~~ 342 (1321)
.+..|......+.....+ +......+..+...+......|. ... .......+..+...+.
T Consensus 287 ~I~~L~~~~~~~~~~~~d----------l~~~~~e~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 356 (1111)
T PF13514_consen 287 EIEALEEQRGEYRKARQD----------LPRLEAELAELEAELRALLAQLGPDWDEEDLEALDPSLAARERIRELLQERE 356 (1111)
T ss_pred HHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHhcCCCcccchhhhcCCCHHHHHHHHHHHHHHH
Confidence 444444443333222211 12222333333333333333333 111 1124466777777777
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhh-----cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhHHHH
Q psy6493 343 DFDKAINAHEEKIGALQTLADQLIAA-----DHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEM 417 (1321)
Q Consensus 343 ~l~~~l~~~~~~~~~l~~~~~~L~~~-----~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l 417 (1321)
.+...+......+.........+-.. .......+...+....... .+...+......+.... ......+..+
T Consensus 357 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~l~~al~~~~~~~-d~~~~~~~~~~~~~~~~--~~l~~~l~~L 433 (1111)
T PF13514_consen 357 QLEQALAQARRELEEAERELEQLQAELAALPAPPDPEALRAALEAAQRLG-DLEARLQEAEQALEAAE--RRLAAALAAL 433 (1111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCChHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHH--HHHHHHHHhc
Confidence 77777777776666666655554432 1112333444444433322 23333333332222221 1233444445
Q ss_pred HHHHHHHHHhhhhcccCCchhHHHHHHHHHHHHHHHHhcHHHHHHH
Q psy6493 418 ENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSV 463 (1321)
Q Consensus 418 ~~Wl~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l 463 (1321)
-.|-...... ...+..++..+......+..+...+......+..+
T Consensus 434 ~~w~~~~~~l-~~~~~P~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1111)
T PF13514_consen 434 GPWSGDLDAL-AALPLPSRETVEAFRAEFEELERQLRRARDRLEEL 478 (1111)
T ss_pred CCCCCChHHH-hccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554432221 11222344555555555555555554444444433
No 154
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=87.58 E-value=0.53 Score=40.11 Aligned_cols=66 Identities=18% Similarity=0.467 Sum_probs=51.1
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCC----CCccccHHHHHHHHhhh
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN----RDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~~g~i~~~ef~~~~~~~ 1246 (1321)
++..+|..+-. +.+.|+..+|..+|..-...+. .+...+..++..+.++ ..+.++++.|..++.+.
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~-----~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPR-----LTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TT-----SSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhcccc-----CcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 46788999966 6799999999999976544321 1678888999888654 36899999999999664
No 155
>KOG4673|consensus
Probab=84.61 E-value=94 Score=36.84 Aligned_cols=52 Identities=15% Similarity=0.241 Sum_probs=38.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHH
Q psy6493 904 QTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFN 958 (1321)
Q Consensus 904 ~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f~~~~~~~~ 958 (1321)
..|.|+..+.+|..||+.+.....++...+++-...+. ++-..|...++.+.
T Consensus 905 ~~p~~~~~ledL~qRy~a~LqmyGEk~Ee~EELrlDl~---dlK~mYk~QIdeLl 956 (961)
T KOG4673|consen 905 RVPGIKAELEDLRQRYAAALQMYGEKDEELEELRLDLV---DLKEMYKEQIDELL 956 (961)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhhHH---HHHHHHHHHHHHHH
Confidence 34889999999999999999999988888876554333 33344666666654
No 156
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.
Probab=84.44 E-value=1.8e+02 Score=39.89 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy6493 907 AIVKRHGDVIARWQKLLGDSNA 928 (1321)
Q Consensus 907 ~i~~~~~~l~~~w~~l~~~~~~ 928 (1321)
.+..++..+...++++......
T Consensus 983 ~~~~~~~~l~~q~~dl~~~~~~ 1004 (1164)
T TIGR02169 983 EVLKRLDELKEKRAKLEEERKA 1004 (1164)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555544443
No 157
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]
Probab=84.23 E-value=1.5e+02 Score=38.91 Aligned_cols=64 Identities=22% Similarity=0.393 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH
Q psy6493 332 DNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALI 395 (1321)
Q Consensus 332 ~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~ 395 (1321)
......+..++.+...+......+..+......+..........+......+..++..+...+.
T Consensus 315 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 378 (908)
T COG0419 315 EELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELEKELE 378 (908)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555555555555555555554332222333344444445555555555444
No 158
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]
Probab=83.87 E-value=1.8e+02 Score=39.46 Aligned_cols=27 Identities=22% Similarity=0.343 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 270 IQDKLGNLAEAREDLEKAWIARRMQLD 296 (1321)
Q Consensus 270 i~~~l~~l~~~~~~l~~~~~~r~~~L~ 296 (1321)
+...+..+...+..+..........+.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ 400 (1163)
T COG1196 374 LEELFEALREELAELEAELAEIRNELE 400 (1163)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444555555555544444333333
No 159
>KOG0933|consensus
Probab=83.19 E-value=1.4e+02 Score=37.62 Aligned_cols=45 Identities=13% Similarity=0.231 Sum_probs=23.3
Q ss_pred HHhhhcccccCCCHHHHHHHHHhHHHHHHhhhhhhhhhHHHHHHHH
Q psy6493 849 KETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLK 894 (1321)
Q Consensus 849 ~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 894 (1321)
.+..+...+.....+.++...+..+....+|... ...+..+....
T Consensus 727 ~~~r~~~~e~~~~~~~~~~~~e~v~e~~~~Ike~-~~~~k~~~~~i 771 (1174)
T KOG0933|consen 727 LEKRLEQNEFHKLLDDLKELLEEVEESEQQIKEK-ERALKKCEDKI 771 (1174)
T ss_pred HHHHHhcChHhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3444444455555566666666666666666652 33333444333
No 160
>KOG1265|consensus
Probab=83.11 E-value=5.6 Score=47.87 Aligned_cols=77 Identities=26% Similarity=0.435 Sum_probs=55.5
Q ss_pred ccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHHHhhCCHh-----------------hHHHHHHcCCCC
Q psy6493 1234 VSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEELYANLTKE-----------------MADYCVERMKPY 1296 (1321)
Q Consensus 1234 i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~-----------------~~~~~~~~~~~~ 1296 (1321)
.+|+-|..++..+ .++.++..+|..+..++..|+|.++|..+|... .+..+++ .
T Consensus 205 f~~e~f~~~l~kl-----cpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~lie----k 275 (1189)
T KOG1265|consen 205 FTLEKFYRLLNKL-----CPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIE----K 275 (1189)
T ss_pred ccHHHHHHHHHhc-----CCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHH----H
Confidence 6677777777554 355789999999998888999999999977433 2333443 3
Q ss_pred CCCCCCCCC-CCCcchHHHHHhhhc
Q psy6493 1297 VDPKTERGI-PGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1297 ~d~~~~d~~-~g~i~~~eF~~~~~~ 1320 (1321)
+.+| ++.. .|.++-+.|+++++|
T Consensus 276 yEp~-~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 276 YEPN-SDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred cCCc-hhhhhccccchhhhHHHhhC
Confidence 4444 2211 499999999999988
No 161
>KOG0971|consensus
Probab=83.02 E-value=1.3e+02 Score=37.17 Aligned_cols=63 Identities=5% Similarity=0.010 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCC-C----CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhH
Q psy6493 727 QHFLAKVEEEEAWISEKQQLLSVEDY-G----DTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNK 789 (1321)
Q Consensus 727 ~~f~~~~~el~~wl~~~e~~l~~~~~-~----~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~ 789 (1321)
.+|...++-+-.-+.+.+-.....|. + .-...++..+...+.+.-.++.++..|..|...+..
T Consensus 906 eq~nstl~ll~~~~~~~Ey~~~~~ps~~~pl~~RA~~~K~~~edaegL~~tle~re~eikeLkk~aKm 973 (1243)
T KOG0971|consen 906 EQLNSTLNLLATAMQEGEYDAERPPSKPPPLELRAAALKAEIEDAEGLGLTLEDRETEIKELKKSAKM 973 (1243)
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCCCcHHHHHHHHHHHHHhhhhhhhhHHhhHHHHHHHHHHHHh
Confidence 34455544444444444433322222 1 223456667777788888888888888888776653
No 162
>KOG0976|consensus
Probab=82.90 E-value=1.2e+02 Score=36.71 Aligned_cols=77 Identities=12% Similarity=0.149 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q psy6493 482 AVQARLASIADQWEFLTQKTTEKSLKLKEANK----QRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLV 557 (1321)
Q Consensus 482 ~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~----~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l 557 (1321)
.|++.....+..-..|.....++...+...-. +.+.....+....-|.++..++.. ++..+..+..++..++.|
T Consensus 369 ~i~e~k~nve~elqsL~~l~aerqeQidelKn~if~~e~~~~dhe~~kneL~~a~ekld~--mgthl~mad~Q~s~fk~L 446 (1265)
T KOG0976|consen 369 SIQEKKENVEEELQSLLELQAERQEQIDELKNHIFRLEQGKKDHEAAKNELQEALEKLDL--MGTHLSMADYQLSNFKVL 446 (1265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccchhHHHHHHHHHHHHHHHH--HhHHHHHHHHHHhhHHHH
Confidence 34455555555555555555444444443321 222223333444444444444322 233444555555555555
Q ss_pred HHH
Q psy6493 558 EAD 560 (1321)
Q Consensus 558 ~~e 560 (1321)
...
T Consensus 447 ke~ 449 (1265)
T KOG0976|consen 447 KEH 449 (1265)
T ss_pred HHh
Confidence 443
No 163
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.
Probab=82.09 E-value=2.2e+02 Score=39.14 Aligned_cols=13 Identities=15% Similarity=0.235 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHHH
Q psy6493 1026 MEALEDTWRNLQK 1038 (1321)
Q Consensus 1026 ~~~l~~~w~~l~~ 1038 (1321)
+..+..+...|+.
T Consensus 967 ~~~l~~~i~~lg~ 979 (1179)
T TIGR02168 967 EEEARRRLKRLEN 979 (1179)
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444444
No 164
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=82.00 E-value=1.5e+02 Score=37.18 Aligned_cols=59 Identities=8% Similarity=0.179 Sum_probs=35.7
Q ss_pred HHHHhHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy6493 303 LFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQ 364 (1321)
Q Consensus 303 ~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~ 364 (1321)
.+...+..+..=+...+..|...+ +.+.+....+.+..+..++......+..+......
T Consensus 395 ~~~~~~~~~e~el~~l~~~l~~~~---~~e~i~~l~e~l~~l~~~l~~~~~~~~~~~~~~~~ 453 (650)
T TIGR03185 395 QLLKELRELEEELAEVDKKISTIP---SEEQIAQLLEELGEAQNELFRSEAEIEELLRQLET 453 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666666666665543 33566666677777777766666666655555444
No 165
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.
Probab=80.95 E-value=2.3e+02 Score=38.80 Aligned_cols=13 Identities=23% Similarity=0.404 Sum_probs=5.3
Q ss_pred cHHHHHHHHHHHH
Q psy6493 1025 TMEALEDTWRNLQ 1037 (1321)
Q Consensus 1025 ~~~~l~~~w~~l~ 1037 (1321)
.+..+..+...|.
T Consensus 994 r~~~l~~q~~dL~ 1006 (1179)
T TIGR02168 994 EYEELKERYDFLT 1006 (1179)
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444443
No 166
>PRK01156 chromosome segregation protein; Provisional
Probab=80.77 E-value=2e+02 Score=37.87 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=9.7
Q ss_pred HHHHHHHHhHHHHHHHHHHHH
Q psy6493 343 DFDKAINAHEEKIGALQTLAD 363 (1321)
Q Consensus 343 ~l~~~l~~~~~~~~~l~~~~~ 363 (1321)
.+..++......+..+.....
T Consensus 473 ~~~~~i~~l~~~i~~l~~~~~ 493 (895)
T PRK01156 473 HYNEKKSRLEEKIREIEIEVK 493 (895)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444554444433
No 167
>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function.
Probab=79.56 E-value=1.6e+02 Score=35.93 Aligned_cols=80 Identities=19% Similarity=0.189 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHhcC---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 228 AEALLERHQEHRTEIDARTGTFQAFDLFGQQLLQSG---HYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLELQLF 304 (1321)
Q Consensus 228 ~~~~l~~~~~l~~el~~~~~~~~~l~~~g~~l~~~~---~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f 304 (1321)
+...+...+.++.+|......++.--.....++-.. .+.+...-+.|..|+..++.|...+.+- ..+
T Consensus 507 I~KIl~DTr~lQkeiN~l~gkL~RtF~v~dElifrdAKkDe~~rkaYK~La~lh~~c~~Li~~v~~t----------G~~ 576 (594)
T PF05667_consen 507 IEKILSDTRELQKEINSLTGKLDRTFTVTDELIFRDAKKDEAARKAYKLLASLHENCSQLIETVEET----------GTI 576 (594)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hHH
Confidence 334444445555555555555554444444444221 1222335555555665555555544443 445
Q ss_pred HHhHHHHHHHHHH
Q psy6493 305 YRDCEQAENWMSA 317 (1321)
Q Consensus 305 ~~~~~~l~~wl~~ 317 (1321)
...+.++..+|..
T Consensus 577 ~rEirdLe~qI~~ 589 (594)
T PF05667_consen 577 SREIRDLEEQIDT 589 (594)
T ss_pred HHHHHHHHHHHHH
Confidence 5555566666554
No 168
>PRK01156 chromosome segregation protein; Provisional
Probab=78.20 E-value=2.3e+02 Score=37.21 Aligned_cols=11 Identities=18% Similarity=-0.142 Sum_probs=5.2
Q ss_pred CCCHHHHHHHH
Q psy6493 859 GRDLSTVQTLL 869 (1321)
Q Consensus 859 ~~~~~~~~~~~ 869 (1321)
+-|........
T Consensus 837 ~lD~~~~~~l~ 847 (895)
T PRK01156 837 FLDEDRRTNLK 847 (895)
T ss_pred cCCHHHHHHHH
Confidence 45555544433
No 169
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=77.38 E-value=2.5e+02 Score=37.08 Aligned_cols=60 Identities=7% Similarity=0.106 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHhhhccCCc
Q psy6493 161 AEQTYAKQKEINEEWTQLTAKANTRKEKLLDSYD-LQRFLSDYRDLMSWINSMMGLVSSDE 220 (1321)
Q Consensus 161 ~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~-~~~f~~~~~~l~~wl~~~e~~l~~~~ 220 (1321)
...++.++......-.++...+.....++.+... ++..-+...+...-+.+....+.+..
T Consensus 104 ~~~Leq~l~~~~~~L~~~q~~l~~~~~~~~~~~~~l~~~pq~~~~~~~~l~~i~~~L~~~~ 164 (1109)
T PRK10929 104 TDALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLG 164 (1109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCC
Confidence 5667777776666666666666666666644443 33333444667777777777776643
No 170
>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament []. The coiled-coil region provides the structural backbone of the thick filament [].; GO: 0003774 motor activity, 0016459 myosin complex; PDB: 2LNK_C 3ZWH_Q.
Probab=77.33 E-value=0.75 Score=58.49 Aligned_cols=25 Identities=28% Similarity=0.427 Sum_probs=0.0
Q ss_pred HhHHHHHHHHhchHHHHHHHHHHHH
Q psy6493 659 KHKRLEAELASHQPAIQNVQETGEK 683 (1321)
Q Consensus 659 ~~~~l~~ei~~~~~~~~~~~~~~~~ 683 (1321)
++..++.+++.....+..+...+..
T Consensus 666 ~i~~l~~eleE~~~~~~~~~ek~kk 690 (859)
T PF01576_consen 666 EIQQLEEELEEEQSEAEAAEEKAKK 690 (859)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444433
No 171
>KOG0978|consensus
Probab=77.03 E-value=1.9e+02 Score=35.46 Aligned_cols=31 Identities=13% Similarity=0.209 Sum_probs=18.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6493 373 AKPIDDKRKQVLDRWRLLKEALIEKRSRLGE 403 (1321)
Q Consensus 373 ~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~ 403 (1321)
..+|...+..|.+-.......+......+.+
T Consensus 260 ~~~in~e~~~L~Ssl~e~~~~l~~~~~~~k~ 290 (698)
T KOG0978|consen 260 FSSINREMRHLISSLQEHEKLLKEYERELKD 290 (698)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4556666666766666666666654444443
No 172
>KOG3555|consensus
Probab=76.55 E-value=2.1 Score=45.15 Aligned_cols=60 Identities=20% Similarity=0.344 Sum_probs=49.4
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
.+.=+|..+|.|.+|.++..|+..+-. +- .+.-++.+|+.+|...||.|+-.|+..++..
T Consensus 251 s~gWMFnklD~N~Dl~Ld~sEl~~I~l----dk-------nE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 251 SLGWMFNKLDTNYDLLLDQSELRAIEL----DK-------NEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred hhhhhhhccccccccccCHHHhhhhhc----cC-------chhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 355579999999999999999987532 22 4566899999999999999999999987643
No 173
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope. They generally form filamentous structures 8 to 14 nm wide. IF proteins are members of a very large multigene family of proteins which has been subdivided in five major subgroups: Type I: Acidic cytokeratins. Type II: Basic cytokeratins. Type III: Vimentin, desmin, glial fibrillary acidic protein (GFAP), peripherin, and plasticin. Type IV: Neurofilaments L, H and M, alpha-internexin and nestin. Type V: Nuclear lamins A, B1, B2 and C. All IF proteins are structurally similar in that they consist of: a central rod domain comprising some 300 to 350 residues which is arranged in coiled-coiled alpha-helices, with at least two short characteristic interruptions; a N-terminal non-helical domain (head) of variable length; and a C-terminal domain (tail) which is also non-helical, and which shows extreme length variation between different IF proteins. While IF proteins are evolutionary and structurally related, they have limited sequence homologies except in several regions of the rod domain. This entry represents the central rod domain found in IF proteins.; PDB: 3TNU_B 3KLT_D 1GK4_F 3TRT_A 3G1E_A 3UF1_C 1GK6_B 1GK7_A 3TYY_B 3V4W_A ....
Probab=75.60 E-value=1.4e+02 Score=33.28 Aligned_cols=23 Identities=13% Similarity=0.364 Sum_probs=13.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHH
Q psy6493 265 YASVEIQDKLGNLAEAREDLEKA 287 (1321)
Q Consensus 265 ~~~~~i~~~l~~l~~~~~~l~~~ 287 (1321)
+..+.+...|..+...|+.....
T Consensus 162 ~~~~dL~~~L~eiR~~ye~~~~~ 184 (312)
T PF00038_consen 162 FRSSDLSAALREIRAQYEEIAQK 184 (312)
T ss_dssp -----HHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhHHHHHHHHHhh
Confidence 33466888888888888765543
No 174
>KOG0042|consensus
Probab=75.59 E-value=3.7 Score=46.91 Aligned_cols=74 Identities=18% Similarity=0.284 Sum_probs=66.8
Q ss_pred CCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1167 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1167 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
.++++++..++..|..+|.|+.|+++..+....|+..+... +...+.+++..+|.+-+|.+...+|..++...
T Consensus 586 ~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~-------d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~ 658 (680)
T KOG0042|consen 586 KLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGW-------DEDRLHEELQEADENLNGFVELREFLQLMSAI 658 (680)
T ss_pred ccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHhhcceeeHHHHHHHHHHH
Confidence 56889999999999999999999999999999999988777 67889999999998889999999999998765
Q ss_pred h
Q psy6493 1247 E 1247 (1321)
Q Consensus 1247 ~ 1247 (1321)
.
T Consensus 659 ~ 659 (680)
T KOG0042|consen 659 K 659 (680)
T ss_pred h
Confidence 3
No 175
>KOG3555|consensus
Probab=74.96 E-value=4.7 Score=42.73 Aligned_cols=98 Identities=14% Similarity=0.152 Sum_probs=72.2
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCH
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSS 1254 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 1254 (1321)
++++.|..+-.+.++......+...-..+...+.+ .-...+-.||...|.+.||.++..|...+.... .+
T Consensus 212 RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p----~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ldk------nE 281 (434)
T KOG3555|consen 212 RLRDWFKALHEDSSQNDKTSSLHSAASGFDTSILP----ICKDSLGWMFNKLDTNYDLLLDQSELRAIELDK------NE 281 (434)
T ss_pred HHHHHHHHHHhhhhccCcchhhcccccccccccCc----chhhhhhhhhhccccccccccCHHHhhhhhccC------ch
Confidence 56777887777777766666555543333221100 135668899999999999999999998876432 44
Q ss_pred HHHHHHHHHHccCCCCCcCHHHHHhhCC
Q psy6493 1255 EEIENAFHAIAASDRPYVTKEELYANLT 1282 (1321)
Q Consensus 1255 ~~~~~~F~~~D~~~~G~I~~~el~~~l~ 1282 (1321)
.-++..|...|...||.|+..|.-..+.
T Consensus 282 ~CikpFfnsCD~~kDg~iS~~EWC~CF~ 309 (434)
T KOG3555|consen 282 ACIKPFFNSCDTYKDGSISTNEWCYCFQ 309 (434)
T ss_pred hHHHHHHhhhcccccCccccchhhhhhc
Confidence 6789999999999999999999888664
No 176
>KOG2243|consensus
Probab=74.74 E-value=3.1 Score=51.42 Aligned_cols=54 Identities=15% Similarity=0.371 Sum_probs=40.9
Q ss_pred HHHHHHccCCCCCcCHHHHHhhC------CHhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhhc
Q psy6493 1259 NAFHAIAASDRPYVTKEELYANL------TKEMADYCVERMKPYVDPKTERGIPGALDYIEFTRTLFQ 1320 (1321)
Q Consensus 1259 ~~F~~~D~~~~G~I~~~el~~~l------~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~~ 1320 (1321)
..|+.||+||.|.|+..+|..+| +..++++++. ....|.| ..++|++|+.-+..
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k~ytqse~dflls--cae~den------d~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHKHYTQSEIDFLLS--CAEADEN------DMFDYEDFVDRFHE 4120 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhccccchhHHHHHHHH--hhccCcc------ccccHHHHHHHhcC
Confidence 35889999999999999999977 3456666554 1234555 79999999987653
No 177
>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in Saccharomyces cerevisiae and higher eukaryotes. In Saccharomyces cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated [].; PDB: 1GO4_F 4DZO_A.
Probab=73.97 E-value=28 Score=44.14 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Q psy6493 818 LATKRKTKLMDNS--AYLQFMWKADVVESW 845 (1321)
Q Consensus 818 ~~~~r~~~Le~~~--~~~~~~~~~~~l~~w 845 (1321)
.+..|..+|.+.. ....|...|..+..|
T Consensus 617 ~~ekr~~RLkevf~~ks~eFr~av~~llGy 646 (722)
T PF05557_consen 617 SAEKRNQRLKEVFKAKSQEFREAVYSLLGY 646 (722)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455666666655 356777778888777
No 178
>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in Saccharomyces cerevisiae and higher eukaryotes. In Saccharomyces cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated [].; PDB: 1GO4_F 4DZO_A.
Probab=73.85 E-value=21 Score=45.26 Aligned_cols=30 Identities=27% Similarity=0.251 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q psy6493 712 LAANRGQKLDESL--TYQHFLAKVEEEEAWIS 741 (1321)
Q Consensus 712 ~~~~r~~~L~~~~--~~~~f~~~~~el~~wl~ 741 (1321)
.+..|..+|..+. ....|-..+..+..|=-
T Consensus 617 ~~ekr~~RLkevf~~ks~eFr~av~~llGyki 648 (722)
T PF05557_consen 617 SAEKRNQRLKEVFKAKSQEFREAVYSLLGYKI 648 (722)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccee
Confidence 3455666676666 23678888888877743
No 179
>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament []. The coiled-coil region provides the structural backbone of the thick filament [].; GO: 0003774 motor activity, 0016459 myosin complex; PDB: 2LNK_C 3ZWH_Q.
Probab=73.66 E-value=1.1 Score=57.15 Aligned_cols=22 Identities=27% Similarity=0.214 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHhh
Q psy6493 514 QRTYIAAVKDLDFWLGEVESLL 535 (1321)
Q Consensus 514 ~~~~~~~~~~l~~WL~~~e~~L 535 (1321)
...+...+.++..-|.+.+..+
T Consensus 210 k~kL~~E~~eL~~qLee~e~~~ 231 (859)
T PF01576_consen 210 KAKLQSENSELTRQLEEAESQL 231 (859)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555555555444
No 180
>PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) []. It is also thought to modulate cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organisation during mitosis. Dynamitin is also involved in anchoring microtubules to centrosomes and may play a role in synapse formation during brain development []. ; GO: 0007017 microtubule-based process, 0005869 dynactin complex
Probab=73.45 E-value=1.8e+02 Score=33.57 Aligned_cols=57 Identities=4% Similarity=0.186 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Q psy6493 546 SVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERI 603 (1321)
Q Consensus 546 ~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l 603 (1321)
.-+...+++..|+.+|......|.........-- ........+...+..|.+....+
T Consensus 88 e~Es~~~kl~RL~~Ev~EL~eEl~~~~~~~~~~~-~e~~~~~~l~~~~~~L~~~L~~l 144 (388)
T PF04912_consen 88 EKESPEQKLQRLRREVEELKEELEKRKADSKESD-EEKISPEELAQQLEELSKQLDSL 144 (388)
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHHhhcccccc-cccCChhhHHHHHHHHHHHHHHh
Confidence 4455678899999999999888887765544322 22234455677777777777776
No 181
>KOG1707|consensus
Probab=73.32 E-value=11 Score=43.75 Aligned_cols=144 Identities=15% Similarity=0.191 Sum_probs=84.9
Q ss_pred hhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHH-HHcCCCCCcccCCCCchHHHHHH---HhcCCC--CCccccHH
Q psy6493 1164 NQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCL-RALGYDLPMVEEGQPDPEFEAIL---DLVDPN--RDGHVSLQ 1237 (1321)
Q Consensus 1164 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l-~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~--~~g~i~~~ 1237 (1321)
....+.+.-+..+..+|...|.|.+|.++-.|+..+= +.++.++ ....+..+- ...-++ .++.++..
T Consensus 185 ~~qelkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl-------~p~~l~~vk~vv~e~~p~gv~~~~ltl~ 257 (625)
T KOG1707|consen 185 EEQELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPL-------DPQELEDVKNVVQEICPDGVYERGLTLP 257 (625)
T ss_pred ccccccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCC-------CHHHHHHHHHHHHhhcCchhhhcccccc
Confidence 3445567788889999999999999999999987764 3455555 333333332 222222 23345655
Q ss_pred HHHHHHhhhhhc------------cc----------------------------CCHHHHHHHHHHHccCCCCCcCHHHH
Q psy6493 1238 EYMAFMISKETE------------NV----------------------------QSSEEIENAFHAIAASDRPYVTKEEL 1277 (1321)
Q Consensus 1238 ef~~~~~~~~~~------------~~----------------------------~~~~~~~~~F~~~D~~~~G~I~~~el 1277 (1321)
-|+-+....... .+ ...+-+..+|..||.|+||-++..||
T Consensus 258 GFLfL~~lfiergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El 337 (625)
T KOG1707|consen 258 GFLFLNTLFIERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEEL 337 (625)
T ss_pred chHHHHHHHHHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHH
Confidence 565432211000 00 00234788999999999999999999
Q ss_pred HhhCCHhhHHHHHHcCCC-CCCCCCCCCCCCCcchHHHHHhh
Q psy6493 1278 YANLTKEMADYCVERMKP-YVDPKTERGIPGALDYIEFTRTL 1318 (1321)
Q Consensus 1278 ~~~l~~~~~~~~~~~~~~-~~d~~~~d~~~g~i~~~eF~~~~ 1318 (1321)
...++.-........... ..-.+ .. |.++|+.|+..+
T Consensus 338 ~~LF~~~P~~pW~~~~~~~~t~~~-~~---G~ltl~g~l~~W 375 (625)
T KOG1707|consen 338 KDLFSTAPGSPWTSSPYKDSTVKN-ER---GWLTLNGFLSQW 375 (625)
T ss_pred HHHhhhCCCCCCCCCcccccceec-cc---ceeehhhHHHHH
Confidence 987653221110000000 11122 33 899999998754
No 182
>KOG4578|consensus
Probab=73.02 E-value=2 Score=44.94 Aligned_cols=55 Identities=16% Similarity=0.278 Sum_probs=24.7
Q ss_pred HHHHHccCCCCCcCHHHHHh---hC-CHhhHHHHHHcCCCCCCCCCCCCCCCCcchHHHHHhh
Q psy6493 1260 AFHAIAASDRPYVTKEELYA---NL-TKEMADYCVERMKPYVDPKTERGIPGALDYIEFTRTL 1318 (1321)
Q Consensus 1260 ~F~~~D~~~~G~I~~~el~~---~l-~~~~~~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~ 1318 (1321)
-|..+|+|.++.|...|.+. ++ +......+...|++|-|.| +| .+|++.|+..+|
T Consensus 338 ~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlN-kD---KkISl~Ew~~CL 396 (421)
T KOG4578|consen 338 YFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLN-KD---KKISLDEWRGCL 396 (421)
T ss_pred eeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccC-CC---ceecHHHHhhhh
Confidence 34445555555555444332 11 2223334444455555555 44 555555554443
No 183
>KOG4578|consensus
Probab=71.76 E-value=2.7 Score=44.08 Aligned_cols=70 Identities=21% Similarity=0.323 Sum_probs=49.8
Q ss_pred HHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1170 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1170 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
+++...+.=.|..+|.|+++.|+..|++-+=+-+-.... ...-.+.++..+|.++|..|+++|+..++..
T Consensus 329 ~DeeRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~------~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 329 PDEERVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSK------PRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred CChhheeeeeeeeecccccCccchhhcchHHHHHHhhcc------HHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 333444556799999999999999887655333221110 2344567899999999999999999988743
No 184
>KOG0998|consensus
Probab=71.14 E-value=4.3 Score=51.32 Aligned_cols=139 Identities=14% Similarity=0.221 Sum_probs=99.1
Q ss_pred CCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhh
Q psy6493 1167 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1167 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
.++..+...+..+|..+.+. +|.++-...+.++..-++.. ..+-.++..+|.+.+|.+++.+|.-.|...
T Consensus 122 ~~~~qe~aky~q~f~s~~p~-~g~~sg~~~~pil~~s~Lp~---------~~l~~iw~l~d~d~~g~Ld~~ef~~am~l~ 191 (847)
T KOG0998|consen 122 AITPQEQAKYDQIFRSLSPS-NGLLSGDKAKPILLNSKLPS---------DVLGRIWELSDIDKDGNLDRDEFAVAMHLI 191 (847)
T ss_pred CCCHHHHHHHHHHHhccCCC-CCccccchhhhhhhcCCCCh---------hhhccccccccccccCCCChhhhhhhhhHH
Confidence 35677778888889998876 78898888888876655543 345567788899999999999998655321
Q ss_pred hh--c---------------------------------------------------------------------------
Q psy6493 1247 ET--E--------------------------------------------------------------------------- 1249 (1321)
Q Consensus 1247 ~~--~--------------------------------------------------------------------------- 1249 (1321)
.. .
T Consensus 192 ~~~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~ 271 (847)
T KOG0998|consen 192 NDLLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIV 271 (847)
T ss_pred HHHhhcccCCCCccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCcccccccccccccccc
Confidence 10 0
Q ss_pred ----ccC--CHHHHHHHHHHHccCCCCCcCHHHHHhhCCHhhH-HHHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1250 ----NVQ--SSEEIENAFHAIAASDRPYVTKEELYANLTKEMA-DYCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1250 ----~~~--~~~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~-~~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
... .......+|...|++.+|+|+..+.+..+.+-++ ...+..+....|.. +. |.|++.+|.-.|+
T Consensus 272 s~~~~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~gl~~~~l~~~w~l~d~~-n~---~~ls~~ef~~~~~ 344 (847)
T KOG0998|consen 272 SWSPKVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLPFGLSKPRLAHVWLLADTQ-NT---GTLSKDEFALAMH 344 (847)
T ss_pred ccCcccChHHHHHHHHHHHhccccCCCcccccccccccccCCCChhhhhhhhhhcchh-cc---Ccccccccchhhh
Confidence 000 0123456899999999999999999997766543 23344455567777 77 9999999887664
No 185
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []. The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].
Probab=69.71 E-value=91 Score=28.60 Aligned_cols=80 Identities=19% Similarity=0.307 Sum_probs=57.3
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH-------------hCCCcHHHHHHHHHHHHHHHHHHHH
Q psy6493 114 DLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRLMQ-------------THPETAEQTYAKQKEINEEWTQLTA 180 (1321)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~~-------------~~~~~~~~l~~~~~~l~~~w~~l~~ 180 (1321)
..+++..-++.+...++.+..++...+..+..+...-+.+.. ........+...+..+..+|+.+..
T Consensus 10 ~~~~~~~~ve~L~s~lr~~E~E~~~l~~el~~l~~~r~~l~~Eiv~l~~~~e~~~~~~~~~~~L~~el~~l~~ry~t~Le 89 (120)
T PF12325_consen 10 SGGPSVQLVERLQSQLRRLEGELASLQEELARLEAERDELREEIVKLMEENEELRALKKEVEELEQELEELQQRYQTLLE 89 (120)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677778888888888888888888888777655444431 1122356778888888888888888
Q ss_pred HHHHHHHHHHhhH
Q psy6493 181 KANTRKEKLLDSY 193 (1321)
Q Consensus 181 ~~~~r~~~L~~~~ 193 (1321)
.+.++....++..
T Consensus 90 llGEK~E~veEL~ 102 (120)
T PF12325_consen 90 LLGEKSEEVEELR 102 (120)
T ss_pred HhcchHHHHHHHH
Confidence 8888877776544
No 186
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []. The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].
Probab=69.36 E-value=93 Score=28.55 Aligned_cols=83 Identities=17% Similarity=0.304 Sum_probs=59.3
Q ss_pred cccCCCCCHHHHHHHHHhhHhHHHHHhhhHHHHHHHHHHHHHHHhc----C--------CchHHhhHHHHHHHHHHHHHH
Q psy6493 4 QVQDVGEDLEQVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQLMSL----G--------QTEAALKIQTQLQDLNQKWTS 71 (1321)
Q Consensus 4 ~~~~~~~d~~~~~~~~~~~~~l~~el~~~~~~v~~l~~~~~~l~~~----~--------~~~~~~~i~~~l~~l~~~w~~ 71 (1321)
++..-|++...++.+...++.+..++...+..+..+...-+.+... . .......++..+.+|+.||+.
T Consensus 7 s~~~~~~~~~~ve~L~s~lr~~E~E~~~l~~el~~l~~~r~~l~~Eiv~l~~~~e~~~~~~~~~~~L~~el~~l~~ry~t 86 (120)
T PF12325_consen 7 STSSGGPSVQLVERLQSQLRRLEGELASLQEELARLEAERDELREEIVKLMEENEELRALKKEVEELEQELEELQQRYQT 86 (120)
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455677888899999999999999999998888885444333221 1 011223677888888888888
Q ss_pred HHHHHHHHHHHHHhH
Q psy6493 72 LQQLTAERATQLGSA 86 (1321)
Q Consensus 72 l~~~~~~r~~~L~~~ 86 (1321)
+...++++....+..
T Consensus 87 ~LellGEK~E~veEL 101 (120)
T PF12325_consen 87 LLELLGEKSEEVEEL 101 (120)
T ss_pred HHHHhcchHHHHHHH
Confidence 888888888777654
No 187
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bi-directional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated []. This protein is known as Huntington-interacting protein-1 in humans.
Probab=69.27 E-value=1.5e+02 Score=33.42 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 60 TQLQDLNQKWTSLQQLTAERATQLG 84 (1321)
Q Consensus 60 ~~l~~l~~~w~~l~~~~~~r~~~L~ 84 (1321)
..|..|...+.+....+..|...|.
T Consensus 241 ~~L~kl~~~i~~~lekI~sREk~iN 265 (359)
T PF10498_consen 241 SQLDKLQQDISKTLEKIESREKYIN 265 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444443
No 188
>KOG0996|consensus
Probab=67.52 E-value=3.7e+02 Score=34.81 Aligned_cols=58 Identities=19% Similarity=0.154 Sum_probs=31.0
Q ss_pred HHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 241 EIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQC 298 (1321)
Q Consensus 241 el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~ 298 (1321)
++....................-...+..+......++..|..+..........++-+
T Consensus 448 ei~~L~~~~~~~~~~l~e~~~~l~~~t~~~~~e~~~~ekel~~~~~~~n~~~~e~~va 505 (1293)
T KOG0996|consen 448 EIEQLEELLEKEERELDEILDSLKQETEGIREEIEKLEKELMPLLKQVNEARSELDVA 505 (1293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444444444333333345567777777777777776666655555543
No 189
>KOG2243|consensus
Probab=66.09 E-value=80 Score=40.13 Aligned_cols=58 Identities=14% Similarity=0.375 Sum_probs=47.9
Q ss_pred HhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHH
Q psy6493 1178 MMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1243 (1321)
Q Consensus 1178 ~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 1243 (1321)
+.|..+|+||.|.|+..+|..+|..-... +..++.-++.-...|.+..++|.+|+.-+
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k~y--------tqse~dfllscae~dend~~~y~dfv~rf 4118 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHKHY--------TQSEIDFLLSCAEADENDMFDYEDFVDRF 4118 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhccccc--------hhHHHHHHHHhhccCccccccHHHHHHHh
Confidence 46889999999999999999999764433 46677777777788888999999999755
No 190
>KOG0250|consensus
Probab=65.67 E-value=3.9e+02 Score=34.40 Aligned_cols=81 Identities=10% Similarity=0.146 Sum_probs=48.3
Q ss_pred CCCHHHHHHHHHhHHHHHHhhhhhhhhhHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 859 GRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHD---QTPAIVKRHGDVIARWQKLLGDSNARKQRLLR 935 (1321)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~---~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~ 935 (1321)
..++..+..+.........+|..+ ...+..+......+.....+ .-...+..+.....+.+.+..-+..|...+..
T Consensus 730 ~~~~~~~~~l~~ei~~~~~eIe~~-~~~~e~l~~e~e~~~~e~~e~~~~~~~~~~~l~~e~~~l~~l~~el~~r~dk~~s 808 (1074)
T KOG0250|consen 730 QVDISKLEDLAREIKKKEKEIEEK-EAPLEKLKEELEHIELEAQELEEYYAAGREKLQGEISKLDALKEELKLREDKLRS 808 (1074)
T ss_pred hcchhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Confidence 455666666666666666666664 23344444444433332211 12566777777778888888888888777766
Q ss_pred HHHHH
Q psy6493 936 MQEQF 940 (1321)
Q Consensus 936 ~~~~~ 940 (1321)
+....
T Consensus 809 ~e~~~ 813 (1074)
T KOG0250|consen 809 AEDEK 813 (1074)
T ss_pred hhhhh
Confidence 55433
No 191
>PLN02952 phosphoinositide phospholipase C
Probab=65.11 E-value=30 Score=41.61 Aligned_cols=90 Identities=14% Similarity=0.228 Sum_probs=62.5
Q ss_pred CcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHc-
Q psy6493 1187 KSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIA- 1265 (1321)
Q Consensus 1187 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D- 1265 (1321)
+.|.++..+|..+.+.+...-. ....++..+|..+..+ .+.++.++|..|+...+.....+.+.+..+|..+-
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~-----~~r~ei~~lf~~~~~~-~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~ 86 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEA-----EPPDDVKDVFCKFSVG-GGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVIN 86 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccC-----CChHHHHHHHHHHhCC-CCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHh
Confidence 4689999999888877643210 0467899999998654 46899999999998775444455566666655431
Q ss_pred ------cCCCCCcCHHHHHhhCC
Q psy6493 1266 ------ASDRPYVTKEELYANLT 1282 (1321)
Q Consensus 1266 ------~~~~G~I~~~el~~~l~ 1282 (1321)
..+.+.++.+.|..+|.
T Consensus 87 ~~~~~~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 87 RRHHVTRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred hccccccccccCcCHHHHHHHHc
Confidence 12335589999998764
No 192
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5
Probab=64.65 E-value=3.4e+02 Score=33.33 Aligned_cols=71 Identities=20% Similarity=0.249 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 223 NDVTGAEALLERHQEHRTEIDARTGTFQAFDLFGQQLLQSGH---YASVEIQDKLGNLAEAREDLEKAWIARRM 293 (1321)
Q Consensus 223 ~~~~~~~~~l~~~~~l~~el~~~~~~~~~l~~~g~~l~~~~~---~~~~~i~~~l~~l~~~~~~l~~~~~~r~~ 293 (1321)
+|...+...+.+-+.++..+...+..|-.|...-..|...-. .....+...+..++..|..+...+..+..
T Consensus 150 sdk~t~SRAlsQN~eLK~QL~Elq~~Fv~ltne~~elt~~lq~Eq~~~keL~~kl~~l~~~l~~~~e~le~K~q 223 (617)
T PF15070_consen 150 SDKATASRALSQNRELKEQLAELQDAFVKLTNENMELTSALQSEQHVKKELQKKLGELQEKLHNLKEKLELKSQ 223 (617)
T ss_pred ccchHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344556666777778888877777777777766544433221 12245777788888888888777666543
No 193
>COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning]
Probab=64.57 E-value=2.8e+02 Score=32.38 Aligned_cols=135 Identities=16% Similarity=0.249 Sum_probs=63.6
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy6493 131 GLERDLAALGDKIRQLDETANRLMQTHPETAEQTYAKQKEINEEWTQLTAKANTRKEKLLDSYDLQRFLSDYRDLMSWIN 210 (1321)
Q Consensus 131 ~l~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~ 210 (1321)
...+-+...+..+..+......|..+..... ..+......|..+..-+..+...+..+.. .+...+..+..-++
T Consensus 108 ~ie~~l~~iE~~i~~il~~l~~Lv~sEekN~----~~i~~~~ely~elr~~vl~n~~~~Ge~~~--~lEk~Le~i~~~l~ 181 (570)
T COG4477 108 DIEQQLTLIEEDIEQILEDLNELVESEEKNS----EEIDHVLELYEELRRDVLANRHQYGEAAP--ELEKKLENIEEELS 181 (570)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHhhhhhhhhhH--HHHHHHHHHHHHHH
Confidence 3444555556666666666666654322222 23344455677777776666666554443 22223333333333
Q ss_pred HHhhhccCCcccCCHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHH
Q psy6493 211 SMMGLVSSDELANDVTGAEALLERHQEHRTEIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLE 285 (1321)
Q Consensus 211 ~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~ 285 (1321)
..... ..++|+-.+...+...+.....+.+.-..+-.+....+ ..+...+..|..-|..+.
T Consensus 182 qf~~l----t~~Gd~ieA~evl~~~ee~~~~L~~~~e~IP~L~~e~~----------~~lP~ql~~Lk~Gyr~m~ 242 (570)
T COG4477 182 QFVEL----TSSGDYIEAREVLEEAEEHMIALRSIMERIPSLLAELQ----------TELPGQLQDLKAGYRDMK 242 (570)
T ss_pred HHHHh----ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hhchHHHHHHHHHHHHHH
Confidence 33221 12455555555555555555444433333333322222 223455555655555543
No 194
>KOG4673|consensus
Probab=63.16 E-value=3.3e+02 Score=32.66 Aligned_cols=70 Identities=17% Similarity=0.233 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhhcCCCchHHHHHHH
Q psy6493 727 QHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQ 806 (1321)
Q Consensus 727 ~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~ 806 (1321)
..|...+.++..-|..++..+ -++-..|..++...+..+...-.++..|+..-+.....+-+.+.
T Consensus 583 ~~lvqqv~dLR~~L~~~Eq~a---------------arrEd~~R~Ei~~LqrRlqaaE~R~eel~q~v~~TTrPLlRQIE 647 (961)
T KOG4673|consen 583 SMLVQQVEDLRQTLSKKEQQA---------------ARREDMFRGEIEDLQRRLQAAERRCEELIQQVPETTRPLLRQIE 647 (961)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHH
Confidence 455566666665555555443 23456677788888888888888888888775555444444444
Q ss_pred HHHHH
Q psy6493 807 QLQLK 811 (1321)
Q Consensus 807 ~l~~~ 811 (1321)
.|+..
T Consensus 648 ~lQ~t 652 (961)
T KOG4673|consen 648 ALQET 652 (961)
T ss_pred HHHHH
Confidence 44433
No 195
>KOG3866|consensus
Probab=62.37 E-value=7.7 Score=40.30 Aligned_cols=68 Identities=28% Similarity=0.410 Sum_probs=46.3
Q ss_pred HHhhhhccccCcCCCChHHHHHHHHH-c--CCCCCcccCCCCchHH--------HHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1177 SMMFKHFDKDKSGKLNQTEFKSCLRA-L--GYDLPMVEEGQPDPEF--------EAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1177 ~~~F~~~D~~~~g~i~~~e~~~~l~~-~--~~~~~~~~~~~~~~~~--------~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
...|...|.|++|+++..++.+++.. + -+++...++ ...++ ..+|+.+|++.|..|+..+|+.-...
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeD--DM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEED--DMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcch--HHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhh
Confidence 34688999999999999999887742 2 133311111 11111 13678899999999999999987644
Q ss_pred h
Q psy6493 1246 K 1246 (1321)
Q Consensus 1246 ~ 1246 (1321)
.
T Consensus 325 k 325 (442)
T KOG3866|consen 325 K 325 (442)
T ss_pred c
Confidence 3
No 196
>PF11802 CENP-K: Centromere-associated protein K; InterPro: IPR020993 Cenp-K is one of seven new Cenp-A-nucleosome distal (CAD) centromere components (the others being Cenp-L, Cenp-O, Cenp-P, Cenp-Q, Cenp-R and Cenp-S) that are identified as assembling on the Cenp-A nucleosome associated complex, NAC []. The Cenp-A NAC is essential, as disruption of the complex causes errors of chromosome alignment and segregation that preclude cell survival despite continued centromere-derived mitotic checkpoint signalling. Cenp-K is centromere-associated through its interaction with one or more components of the Cenp-A NAC.; GO: 0005634 nucleus
Probab=61.52 E-value=2.2e+02 Score=30.11 Aligned_cols=121 Identities=15% Similarity=0.156 Sum_probs=76.5
Q ss_pred HhHHHHHHHHHHhhhhh---cCCcCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHHHHHHHH
Q psy6493 625 RDIADEESWIKEKKLLV---GSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKL 701 (1321)
Q Consensus 625 ~~~~~~~~Wl~~~~~~l---~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~l~~ 701 (1321)
.+|+++..-|.+.+..+ ...+++.+-..+.-.+-+.+.+..++...+...-.+...-..++ ....+..+..
T Consensus 23 ~eCEe~wk~me~~q~kL~l~~~e~l~~s~~ql~ll~~~~k~L~aE~~qwqk~~peii~~n~~VL------~~lgkeelqk 96 (268)
T PF11802_consen 23 KECEELWKDMEECQNKLSLIGTETLTDSDAQLSLLMMRVKCLTAELEQWQKRTPEIIPLNPEVL------LTLGKEELQK 96 (268)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCcCCCCHHHH------HHHHHHHHHH
Confidence 44444444444444333 34455555566677777777888887776544332221111111 1234677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhcCCC
Q psy6493 702 LNQAWSELKQLAANRGQKLDESL-TYQHFLAKVEEEEAWISEKQQLLSVED 751 (1321)
Q Consensus 702 l~~~w~~l~~~~~~r~~~L~~~~-~~~~f~~~~~el~~wl~~~e~~l~~~~ 751 (1321)
+....+.+...+..+...|+..+ .-+++.....++..-+......+....
T Consensus 97 l~~eLe~vLs~~q~KnekLke~LerEq~wL~Eqqql~~sL~~r~~elk~~~ 147 (268)
T PF11802_consen 97 LISELEMVLSTVQSKNEKLKEDLEREQQWLDEQQQLLESLNKRHEELKNQV 147 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88888888888888888888888 447788888888888877777776543
No 197
>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]
Probab=61.44 E-value=2.9e+02 Score=31.42 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHH
Q psy6493 161 AEQTYAKQKEINEEWTQLTAKANTRKEKLLDSYD-LQRFLSDYRDLMSWINSM 212 (1321)
Q Consensus 161 ~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~-~~~f~~~~~~l~~wl~~~ 212 (1321)
...+...+..++-.-..|...+.+|....+.... +......++.+..-+...
T Consensus 377 re~L~reL~~i~~~~~~L~k~V~~~~leaq~~~~slek~~~~~~sl~~~i~~~ 429 (622)
T COG5185 377 REKLTRELDKINIQSDKLTKSVKSRKLEAQGIFKSLEKTLRQYDSLIQNITRS 429 (622)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3445555566666666666777766666665554 544445555555544443
No 198
>PF04065 Not3: Not1 N-terminal domain, CCR4-Not complex component ; InterPro: IPR007207 The Ccr4-Not complex (Not1, Not2, Not3, Not4 and Not5) is a global regulator of transcription that affects genes positively and negatively and is thought to regulate transcription factor TFIID []. This domain is the N-terminal region of the Not proteins.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=61.38 E-value=1.2e+02 Score=31.74 Aligned_cols=87 Identities=10% Similarity=0.290 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHH--HHHHHHhHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHHHHHH
Q psy6493 58 IQTQLQDLNQKWTSLQQ-LTAERATQLGSAHE--VQRFHRDVDETKDWIQEKDEALNNNDLGKDLRSVQALQRKHEGLER 134 (1321)
Q Consensus 58 i~~~l~~l~~~w~~l~~-~~~~r~~~L~~~l~--~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~l~~ 134 (1321)
|..=+...+.-|+.+.. .....+.+|+.-|. ...+++--+++..|+...+-. ....+...-..++..+.+++.++.
T Consensus 17 v~EG~~~F~~i~~K~~~~~n~~QKEK~E~DLKkEIKKLQR~RdQIK~W~~~~diK-dk~~L~e~Rk~IE~~MErFK~vEk 95 (233)
T PF04065_consen 17 VQEGVEEFDEIYEKVESATNQNQKEKLEADLKKEIKKLQRLRDQIKTWLSSNDIK-DKKKLLENRKLIEEQMERFKVVEK 95 (233)
T ss_pred HHHHHHHHHHHHHHHHcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHccCcccc-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556666666665 23334556666553 555666667788887544332 111122223345555566666665
Q ss_pred HHHHhHhHHHH
Q psy6493 135 DLAALGDKIRQ 145 (1321)
Q Consensus 135 ~l~~~~~~v~~ 145 (1321)
+.....-.=++
T Consensus 96 esKtKafSkeG 106 (233)
T PF04065_consen 96 ESKTKAFSKEG 106 (233)
T ss_pred Hhcccccchhh
Confidence 55444333333
No 199
>KOG1707|consensus
Probab=61.18 E-value=10 Score=44.08 Aligned_cols=73 Identities=18% Similarity=0.266 Sum_probs=53.4
Q ss_pred hhcCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHH
Q psy6493 1164 NQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1243 (1321)
Q Consensus 1164 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 1243 (1321)
....+++.-+..+..+|..||.|+||.+++.||..++...+..+-.. ...... .-.+..|.++|.-|+..|
T Consensus 305 ~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~-----~~~~~~----t~~~~~G~ltl~g~l~~W 375 (625)
T KOG1707|consen 305 QSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTS-----SPYKDS----TVKNERGWLTLNGFLSQW 375 (625)
T ss_pred cceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCC-----Cccccc----ceecccceeehhhHHHHH
Confidence 35567889999999999999999999999999999998876554100 000000 012256899999999887
Q ss_pred hh
Q psy6493 1244 IS 1245 (1321)
Q Consensus 1244 ~~ 1245 (1321)
.-
T Consensus 376 sL 377 (625)
T KOG1707|consen 376 SL 377 (625)
T ss_pred HH
Confidence 43
No 200
>KOG1510|consensus
Probab=61.17 E-value=82 Score=28.93 Aligned_cols=44 Identities=32% Similarity=0.320 Sum_probs=36.1
Q ss_pred HHhhhcccccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHH
Q psy6493 1079 RTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEE 1122 (1321)
Q Consensus 1079 ~~~~~~~~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~ 1122 (1321)
...++...++.+.|+.++++++.+......++..+..-+.++.+
T Consensus 76 IdsLP~~~~~~e~Ql~~i~kLq~en~e~~~el~~~v~~~e~Ll~ 119 (139)
T KOG1510|consen 76 IDSLPGEEGSAEAQLEKIKKLQEENEEVALELEELVSKGEKLLE 119 (139)
T ss_pred HHhCCCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778999999999999999999988888887777766544
No 201
>KOG0933|consensus
Probab=61.07 E-value=4.5e+02 Score=33.49 Aligned_cols=103 Identities=13% Similarity=0.144 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q psy6493 517 YIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSI 596 (1321)
Q Consensus 517 ~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l 596 (1321)
+.+.+.-..--|.-.+..+...+.....+.+......++..+.+|......+.........+-..-......=..++..+
T Consensus 713 l~~ql~l~~~~l~l~~~r~~~~e~~~~~~~~~~~~e~v~e~~~~Ike~~~~~k~~~~~i~~lE~~~~d~~~~re~rlkdl 792 (1174)
T KOG0933|consen 713 LKQQLELKLHELALLEKRLEQNEFHKLLDDLKELLEEVEESEQQIKEKERALKKCEDKISTLEKKMKDAKANRERRLKDL 792 (1174)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhHhHHHHH
Confidence 33333333444444566666666666778888888888999999988888887777777665433222223344556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 597 NERYERIKNLAAHRQARLNEANT 619 (1321)
Q Consensus 597 ~~~~~~l~~~~~~r~~~Le~~~~ 619 (1321)
..........++.-...++....
T Consensus 793 ~keik~~k~~~e~~~~~~ek~~~ 815 (1174)
T KOG0933|consen 793 EKEIKTAKQRAEESSKELEKREN 815 (1174)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666665555555444
No 202
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntingtons disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34 [].
Probab=60.50 E-value=2.5e+02 Score=30.49 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=30.1
Q ss_pred HHHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 240 TEIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLEL 301 (1321)
Q Consensus 240 ~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~ 301 (1321)
.-++.+...+.-....|+.|+..... +..+...+..........+..-+..|...-++
T Consensus 69 ~lLeEkerDLelaA~iGqsLl~~N~~----L~~~~~~le~~L~~~~e~v~qLrHeL~~kdeL 126 (306)
T PF04849_consen 69 RLLEEKERDLELAARIGQSLLEQNQD----LSERNEALEEQLGAALEQVEQLRHELSMKDEL 126 (306)
T ss_pred HHHHHHhhhHHHHHHHhHHHHHhccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556677777788888766543 33444444444444444444434444333333
No 203
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bi-directional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated []. This protein is known as Huntington-interacting protein-1 in humans.
Probab=60.08 E-value=3e+02 Score=31.15 Aligned_cols=59 Identities=14% Similarity=0.289 Sum_probs=32.6
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy6493 131 GLERDLAALGDKIRQLDETANRLMQTHPETAEQTYAKQKEINEEWTQLTAKANTRKEKLLDSY 193 (1321)
Q Consensus 131 ~l~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~ 193 (1321)
.+...++.+..+=..++.....++.. -.....+++.+...|......+.++...|....
T Consensus 249 ~i~~~lekI~sREk~iN~qle~l~~e----Yr~~~~~ls~~~~~y~~~s~~V~~~t~~L~~Is 307 (359)
T PF10498_consen 249 DISKTLEKIESREKYINNQLEPLIQE----YRSAQDELSEVQEKYKQASEGVSERTRELAEIS 307 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHH----HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34444444444444455544444432 234556667777777777777777766665433
No 204
>KOG4807|consensus
Probab=59.48 E-value=2.7e+02 Score=30.51 Aligned_cols=140 Identities=9% Similarity=0.064 Sum_probs=69.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------HHHHHHHHHHHhhHHHhhHHhhhhhcCCCcC
Q psy6493 905 TPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQ-----------IEDLYLTFAKKASSFNSWFENAEEDLTDPVR 973 (1321)
Q Consensus 905 ~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~-----------~~~l~~~f~~~~~~~~~wl~~~e~~l~~~~~ 973 (1321)
...++..+.-|...|..=|--...-.+.|++....++. +.++...+...+..+...|++--.--..|..
T Consensus 423 lqsvqRELeVLSEQYSQKCLEnahLaqalEaerqaLRqCQrEnQELnaHNQELnnRLaaEItrLRtlltgdGgGtGspla 502 (593)
T KOG4807|consen 423 LQSVQRELEVLSEQYSQKCLENAHLAQALEAERQALRQCQRENQELNAHNQELNNRLAAEITRLRTLLTGDGGGTGSPLA 502 (593)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHhccCCCCCCCccc
Confidence 35566667777766665443333222333322222211 1223333344444444444332222111211
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 974 -CNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEA 1051 (1321)
Q Consensus 974 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~~ 1051 (1321)
+.+.-+++-+++- -..+|...+..+.+|+..-+-.. .+..++..+..++-....-.+...+--+..|.+.+
T Consensus 503 qgkdayELEVLLRV---KEsEiQYLKqEissLkDELQtal----rDKkyaSdKYkDiYtELSiaKakadcdIsrLKEqL 574 (593)
T KOG4807|consen 503 QGKDAYELEVLLRV---KESEIQYLKQEISSLKDELQTAL----RDKKYASDKYKDIYTELSIAKAKADCDISRLKEQL 574 (593)
T ss_pred cCcchhhHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHH----hhhhccccchhHHHHHHHHHHHhhhccHHHHHHHH
Confidence 3455566666652 34677778888888875332221 24567777777776666666666655555555544
No 205
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].; PDB: 2EFR_A 2Z5H_C 2Z5I_D 2D3E_B 2EFS_D 3U59_B 1C1G_C 1IHQ_A 3AZD_B 1MV4_B ....
Probab=59.27 E-value=2.4e+02 Score=29.82 Aligned_cols=26 Identities=12% Similarity=0.108 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 165 YAKQKEINEEWTQLTAKANTRKEKLL 190 (1321)
Q Consensus 165 ~~~~~~l~~~w~~l~~~~~~r~~~L~ 190 (1321)
...++....+...+...+..-...+.
T Consensus 7 ~~eld~~~~~~~~~~~~l~~~~~~~~ 32 (237)
T PF00261_consen 7 KDELDEAEERLEEAEEKLKEAEKRAE 32 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444443
No 206
>KOG3866|consensus
Probab=57.20 E-value=5.1 Score=41.57 Aligned_cols=46 Identities=24% Similarity=0.321 Sum_probs=27.3
Q ss_pred ChHHHHHHHHHc-CCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1192 NQTEFKSCLRAL-GYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1192 ~~~e~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
+...++...... |.++ ..-.-.-+|...|.++||.++-.++-+++.
T Consensus 225 SkdQLkEVWEE~DgLdp-------n~fdPKTFF~LHD~NsDGfldeqELEaLFt 271 (442)
T KOG3866|consen 225 SKDQLKEVWEESDGLDP-------NQFDPKTFFALHDLNSDGFLDEQELEALFT 271 (442)
T ss_pred cHHHHHHHHHHhcCCCc-------ccCCcchheeeeccCCcccccHHHHHHHHH
Confidence 345555554332 4444 333345677777777777777777766654
No 207
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]
Probab=57.00 E-value=5.8e+02 Score=33.56 Aligned_cols=62 Identities=19% Similarity=0.271 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHH
Q psy6493 227 GAEALLERHQEHRTEIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAW 288 (1321)
Q Consensus 227 ~~~~~l~~~~~l~~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~ 288 (1321)
.....++.+..+...+......+..+......+..........+......+......+...+
T Consensus 316 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 377 (908)
T COG0419 316 ELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELEKEL 377 (908)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555555555555444444444433222223334444444444444444443
No 208
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope. They generally form filamentous structures 8 to 14 nm wide. IF proteins are members of a very large multigene family of proteins which has been subdivided in five major subgroups: Type I: Acidic cytokeratins. Type II: Basic cytokeratins. Type III: Vimentin, desmin, glial fibrillary acidic protein (GFAP), peripherin, and plasticin. Type IV: Neurofilaments L, H and M, alpha-internexin and nestin. Type V: Nuclear lamins A, B1, B2 and C. All IF proteins are structurally similar in that they consist of: a central rod domain comprising some 300 to 350 residues which is arranged in coiled-coiled alpha-helices, with at least two short characteristic interruptions; a N-terminal non-helical domain (head) of variable length; and a C-terminal domain (tail) which is also non-helical, and which shows extreme length variation between different IF proteins. While IF proteins are evolutionary and structurally related, they have limited sequence homologies except in several regions of the rod domain. This entry represents the central rod domain found in IF proteins.; PDB: 3TNU_B 3KLT_D 1GK4_F 3TRT_A 3G1E_A 3UF1_C 1GK6_B 1GK7_A 3TYY_B 3V4W_A ....
Probab=56.41 E-value=3.2e+02 Score=30.38 Aligned_cols=20 Identities=5% Similarity=0.242 Sum_probs=12.0
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q psy6493 905 TPAIVKRHGDVIARWQKLLG 924 (1321)
Q Consensus 905 ~~~i~~~~~~l~~~w~~l~~ 924 (1321)
.+.+...+.+++..|+....
T Consensus 164 ~~dL~~~L~eiR~~ye~~~~ 183 (312)
T PF00038_consen 164 SSDLSAALREIRAQYEEIAQ 183 (312)
T ss_dssp ---HHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhHHHHHHHHHh
Confidence 35677777778777775543
No 209
>KOG0972|consensus
Probab=55.81 E-value=2.7e+02 Score=29.34 Aligned_cols=109 Identities=12% Similarity=0.197 Sum_probs=0.0
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q psy6493 990 FQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHAN 1069 (1321)
Q Consensus 990 ~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~~f~~~~~ 1069 (1321)
+..+-...+-.++....+...+.+. ...+...++.|..-...-...+..|...|...+ ..+.++| +
T Consensus 218 ~k~DakDWR~H~~QM~s~~~nIe~~----~~~~~~~Ldklh~eit~~LEkI~SREK~lNnqL------~~l~q~f----r 283 (384)
T KOG0972|consen 218 LKQDAKDWRLHLEQMNSMHKNIEQK----VGNVGPYLDKLHKEITKALEKIASREKSLNNQL------ASLMQKF----R 283 (384)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHh----hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHH----H
Q ss_pred HHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHHhhhhhHHH
Q psy6493 1070 AFHQWLTETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKK 1112 (1321)
Q Consensus 1070 ~l~~wl~~~~~~~~~~~~~l~~ql~~~~~l~~ei~~~~~~~~~ 1112 (1321)
.+..-+.+....+....+....+-+.+.++..+++..++.++.
T Consensus 284 ~a~~~lse~~e~y~q~~~gv~~rT~~L~eVm~e~E~~KqemEe 326 (384)
T KOG0972|consen 284 RATDTLSELREKYKQASVGVSSRTETLDEVMDEIEQLKQEMEE 326 (384)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
No 210
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=55.08 E-value=48 Score=32.18 Aligned_cols=68 Identities=10% Similarity=0.246 Sum_probs=47.6
Q ss_pred HHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhh
Q psy6493 1176 FSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKE 1247 (1321)
Q Consensus 1176 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 1247 (1321)
+-..|..|...+...|+...|..+++..|+-. ...+...+.-+|..+-..+..+|+|++|..++..+.
T Consensus 4 ~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d----~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA 71 (154)
T PF05517_consen 4 VFKAFASFGKKNGTEMDSKNFAKLCKDCGIID----KKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELA 71 (154)
T ss_dssp HHHHHHCSSTSTSSEEEHHHHHHHHHHTSS------SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCccccccHHHHHHHHHHcCCCC----CCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHH
Confidence 33445555555567899999999999887532 112677888899998777777899999999887654
No 211
>PF14735 HAUS4: HAUS augmin-like complex subunit 4
Probab=54.71 E-value=2.8e+02 Score=29.18 Aligned_cols=60 Identities=27% Similarity=0.354 Sum_probs=46.1
Q ss_pred CcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy6493 1019 NPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTET 1078 (1321)
Q Consensus 1019 ~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~~f~~~~~~l~~wl~~~ 1078 (1321)
..|+..++..+..-++.|..........+..+..++..++.+-..|...+.++..-...+
T Consensus 166 ~TYTpe~v~Al~~Ir~~L~~~~~~~e~~~~~a~~~L~~Ye~lg~~F~~ivreY~~l~~~i 225 (238)
T PF14735_consen 166 DTYTPETVPALRKIRDHLEEAIEELEQELQKARQRLESYEGLGPEFEEIVREYTDLQQEI 225 (238)
T ss_pred ccCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHHHHHH
Confidence 467788888888889999999988888888888888877777777766666665544443
No 212
>KOG1955|consensus
Probab=51.62 E-value=14 Score=41.18 Aligned_cols=61 Identities=18% Similarity=0.220 Sum_probs=41.9
Q ss_pred HHHHHHHHHHccCCCCCcCHHHHHhhCCHhhHH-HHHHcCCCCCCCCCCCCCCCCcchHHHHHhhh
Q psy6493 1255 EEIENAFHAIAASDRPYVTKEELYANLTKEMAD-YCVERMKPYVDPKTERGIPGALDYIEFTRTLF 1319 (1321)
Q Consensus 1255 ~~~~~~F~~~D~~~~G~I~~~el~~~l~~~~~~-~~~~~~~~~~d~~~~d~~~g~i~~~eF~~~~~ 1319 (1321)
+....-|+.+-.|-.|+|+..--+.++++..+. ..+.+|....|.+ .| |.+++.||+..|+
T Consensus 231 eYYvnQFrtvQpDp~gfisGsaAknFFtKSklpi~ELshIWeLsD~d-~D---GALtL~EFcAAfH 292 (737)
T KOG1955|consen 231 EYYVNQFRTVQPDPHGFISGSAAKNFFTKSKLPIEELSHIWELSDVD-RD---GALTLSEFCAAFH 292 (737)
T ss_pred HHHHhhhhcccCCcccccccHHHHhhhhhccCchHHHHHHHhhcccC-cc---ccccHHHHHhhHh
Confidence 456677888888889999887777766554321 1222344456777 77 9999999988774
No 213
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntingtons disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34 [].
Probab=51.38 E-value=3.6e+02 Score=29.42 Aligned_cols=28 Identities=14% Similarity=0.179 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 270 IQDKLGNLAEAREDLEKAWIARRMQLDQ 297 (1321)
Q Consensus 270 i~~~l~~l~~~~~~l~~~~~~r~~~L~~ 297 (1321)
+...+..++.+|..+..++++....|..
T Consensus 274 L~aEL~elqdkY~E~~~mL~EaQEElk~ 301 (306)
T PF04849_consen 274 LQAELQELQDKYAECMAMLHEAQEELKT 301 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666888888998888888887776654
No 214
>PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) []. It is also thought to modulate cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organisation during mitosis. Dynamitin is also involved in anchoring microtubules to centrosomes and may play a role in synapse formation during brain development []. ; GO: 0007017 microtubule-based process, 0005869 dynactin complex
Probab=51.03 E-value=4.4e+02 Score=30.40 Aligned_cols=53 Identities=19% Similarity=0.191 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCCCCHHHHHHHHHHHHHHHHHH
Q psy6493 442 KHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFL 497 (1321)
Q Consensus 442 ~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~l~~~w~~l 497 (1321)
-.+++..+..|+......+..+......--.. ......+...+..|......|
T Consensus 92 ~~~kl~RL~~Ev~EL~eEl~~~~~~~~~~~~e---~~~~~~l~~~~~~L~~~L~~l 144 (388)
T PF04912_consen 92 PEQKLQRLRREVEELKEELEKRKADSKESDEE---KISPEELAQQLEELSKQLDSL 144 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccc---cCChhhHHHHHHHHHHHHHHh
Confidence 34555567788877777777665544432211 123455777888888887777
No 215
>KOG0250|consensus
Probab=48.94 E-value=7.2e+02 Score=32.23 Aligned_cols=104 Identities=14% Similarity=0.090 Sum_probs=68.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 432 SYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCV-GSEEAVQARLASIADQWEFLTQKTTEKSLKLKE 510 (1321)
Q Consensus 432 ~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~-~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~ 510 (1321)
...+...+.+.....+....+|+.+...++.+......+.....+. .........+....++.+.+...+..|..++..
T Consensus 729 ~~~~~~~~~~l~~ei~~~~~eIe~~~~~~e~l~~e~e~~~~e~~e~~~~~~~~~~~l~~e~~~l~~l~~el~~r~dk~~s 808 (1074)
T KOG0250|consen 729 KQVDISKLEDLAREIKKKEKEIEEKEAPLEKLKEELEHIELEAQELEEYYAAGREKLQGEISKLDALKEELKLREDKLRS 808 (1074)
T ss_pred hhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Confidence 3446667777788888888899999888888877776665543321 123456677777788888888888888888877
Q ss_pred HHH-HHHHHHHHHHHHHhHHHHHHhh
Q psy6493 511 ANK-QRTYIAAVKDLDFWLGEVESLL 535 (1321)
Q Consensus 511 ~~~-~~~~~~~~~~l~~WL~~~e~~L 535 (1321)
.-. ...|+..+.....-+..+|..+
T Consensus 809 ~e~~~~HyE~~~K~~l~~l~~~E~~~ 834 (1074)
T KOG0250|consen 809 AEDEKRHYEDKLKSRLEELKQKEVEK 834 (1074)
T ss_pred hhhhhhhHHHHHHHhhHHHHHHHHHH
Confidence 543 3444444444444444444433
No 216
>PF08429 PLU-1: PLU-1-like protein; InterPro: IPR013637 This domain is found in the central region of lysine-specific demethylases, which are nuclear proteins that may have a role in DNA-binding and transcription, and are associated with malignant cancer phenotypes []. The domain is also found in various other Jumonji/ARID domain-containing proteins (see IPR013129 from INTERPRO, IPR001606 from INTERPRO). ; GO: 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process
Probab=46.29 E-value=4.8e+02 Score=29.39 Aligned_cols=29 Identities=24% Similarity=0.470 Sum_probs=19.5
Q ss_pred HHHHHHHhhcCCCCCCCChHHHHHHHHHHH
Q psy6493 101 DWIQEKDEALNNNDLGKDLRSVQALQRKHE 130 (1321)
Q Consensus 101 ~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~ 130 (1321)
.|.......|. .+...++..++.++..-+
T Consensus 2 ~W~~k~~~~l~-~~~k~~L~~l~~Ll~e~e 30 (335)
T PF08429_consen 2 TWAEKVKEALE-ESPKPSLKELRSLLSEGE 30 (335)
T ss_pred hhHHHHHHHHh-cCCCCCHHHHHHHHHHHH
Confidence 57777777776 345567777777776654
No 217
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=45.54 E-value=35 Score=32.09 Aligned_cols=70 Identities=11% Similarity=0.178 Sum_probs=38.9
Q ss_pred CCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCC-------CccccHHHHHHHHhhhhhcccCCHHHHHHHH
Q psy6493 1189 GKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNR-------DGHVSLQEYMAFMISKETENVQSSEEIENAF 1261 (1321)
Q Consensus 1189 g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-------~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F 1261 (1321)
+.|++.||...=.-+.+. ...+..++..|..+| .+.|+|+-|..||..... ...+.+-....|
T Consensus 6 ~~lsp~eF~qLq~y~eys---------~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe-~d~P~~lc~hLF 75 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSEYS---------TKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLE-VDLPEDLCQHLF 75 (138)
T ss_dssp S-S-HHHHHHHHHHHHH-------------HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT--S--HHHHHHHH
T ss_pred eccCHHHHHHHHHHHHHH---------HHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHc-CCCCHHHHHHHH
Confidence 567777777654433332 235666666664332 457999999999977653 347778888999
Q ss_pred HHHccCC
Q psy6493 1262 HAIAASD 1268 (1321)
Q Consensus 1262 ~~~D~~~ 1268 (1321)
..|-...
T Consensus 76 ~sF~~~~ 82 (138)
T PF14513_consen 76 LSFQKKP 82 (138)
T ss_dssp HHS----
T ss_pred HHHhCcc
Confidence 9886543
No 218
>KOG4347|consensus
Probab=45.36 E-value=24 Score=41.59 Aligned_cols=60 Identities=12% Similarity=0.181 Sum_probs=50.6
Q ss_pred CchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHccCCCCCcCHHHH
Q psy6493 1215 PDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIAASDRPYVTKEEL 1277 (1321)
Q Consensus 1215 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~el 1277 (1321)
+......+|...|.+++|.++|.+|+..+..+. .+...+.+.-+|+.+|.+++ ....++.
T Consensus 553 s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~--~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 553 SLIFLERLFRLLDDSMTGLLTFKDLVSGLSILK--AGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHHhcccCCcceeEHHHHHHHHHHHH--hhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 456677899999999999999999999887664 34555778899999999999 8888887
No 219
>TIGR03545 conserved hypothetical protein TIGR03545. This model represents a relatively rare but broadly distributed uncharacterized protein family, distributed in 1-2 percent of bacterial genomes, all of which have outer membranes. In many of these genomes, it is part of a two-gene pair.
Probab=45.02 E-value=6.2e+02 Score=30.73 Aligned_cols=141 Identities=17% Similarity=0.257 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHhhhhcccCCchhHHHHHHHHHHHHHHHHhcH
Q psy6493 378 DKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANA 457 (1321)
Q Consensus 378 ~~~~~l~~r~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~Wl~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~ 457 (1321)
...+.+...|+.....+..|...|.....+..+.+.+.++.. ....+|..+.....+++.+..++..-.
T Consensus 164 ~~~~~~~~~~k~~~~~w~~~~~~Lp~~~~~~~yk~~v~~i~~-----------~~ik~p~~i~~~~~e~d~lk~e~~~~~ 232 (555)
T TIGR03545 164 ETAEEIEKSLKAMQQKWKKRKKDLPNKQDLEEYKKRLEAIKK-----------KDIKNPLELQKIKEEFDKLKKEGKADK 232 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHh-----------ccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 566677777777777777777777654466667666666655 245577788888888887888876666
Q ss_pred HHHHHHHHHhHHhHhccCCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhHHH
Q psy6493 458 DRIQSVLAMGQNLIDKRQCVGSEEAVQARLASI----ADQWEFLTQKTTEKSLKLKEAN---KQRTYIAAVKDLDFWLGE 530 (1321)
Q Consensus 458 ~~~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~l----~~~w~~l~~~~~~r~~~L~~~~---~~~~~~~~~~~l~~WL~~ 530 (1321)
..+..+....... ...++..+.++ ...|+.|.....-....+.+.. --.....-+..+..|...
T Consensus 233 ~~i~~~~~~l~~~---------~~~~~~~~~~lk~ap~~D~~~L~~~~~~~~~~~~~~~~~L~g~~i~~~~~~~~~~y~~ 303 (555)
T TIGR03545 233 QKIKSAKNDLQND---------KKQLKADLAELKKAPQNDLKRLENKYAIKSGDLKNFAVDLFGPEIRKYLQKFLKYYDQ 303 (555)
T ss_pred HHHHHHHHHHHHh---------HHHHHHHHHHHHhccHhHHHHHHHHhCCCcccHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 5555444433321 22222222222 2333333333322222222211 123344556667777777
Q ss_pred HHHhhcCC
Q psy6493 531 VESLLTSE 538 (1321)
Q Consensus 531 ~e~~L~~~ 538 (1321)
....+...
T Consensus 304 ~~p~i~~~ 311 (555)
T TIGR03545 304 AEPLLNKS 311 (555)
T ss_pred HhHhhccc
Confidence 77666443
No 220
>KOG0995|consensus
Probab=43.50 E-value=6.3e+02 Score=30.02 Aligned_cols=127 Identities=9% Similarity=0.087 Sum_probs=59.8
Q ss_pred hHHHHHHHHH-HHHHHHHhcHHHHHHHHHHhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q psy6493 438 NIQSKHQKHQ-AFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANK-QR 515 (1321)
Q Consensus 438 ~l~~~l~~~~-~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~-~~ 515 (1321)
.++..+.+.. .+..+++..+..-..+.+....+ .....+...++.+|..|..-+.....-+.+... .+
T Consensus 221 Elk~~l~~~~~~i~~~ie~l~~~n~~l~e~i~e~----------ek~~~~~eslre~~~~L~~D~nK~~~y~~~~~~k~~ 290 (581)
T KOG0995|consen 221 ELKHRLEKYFTSIANEIEDLKKTNRELEEMINER----------EKDPGKEESLREKKARLQDDVNKFQAYVSQMKSKKQ 290 (581)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hcCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhhhH
Confidence 4444444433 24555555555544444444322 122235556666666666655544444444432 44
Q ss_pred HHHHHHHHHHHhHHHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 516 TYIAAVKDLDFWLGEVESLLTSE------------DSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQ 574 (1321)
Q Consensus 516 ~~~~~~~~l~~WL~~~e~~L~~~------------~~~~d~~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~ 574 (1321)
.+...+..+..=+..+|..+... --+-+.++++.+-..-..+..++...++.++.+.+.
T Consensus 291 ~~~~~l~~l~~Eie~kEeE~e~lq~~~d~Lk~~Ie~Q~iS~~dve~mn~Er~~l~r~l~~i~~~~d~l~k~ 361 (581)
T KOG0995|consen 291 HMEKKLEMLKSEIEEKEEEIEKLQKENDELKKQIELQGISGEDVERMNLERNKLKRELNKIQSELDRLSKE 361 (581)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555444444332110 013344555555555555555555555555544443
No 221
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=43.48 E-value=7.8e+02 Score=31.07 Aligned_cols=133 Identities=14% Similarity=0.191 Sum_probs=63.2
Q ss_pred CCCHHHHHHHHHhhHhHHHH-HhhhHHHHHHHHHHHHHHHhcCCchHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy6493 9 GEDLEQVEVMQKKFDDFQSD-LKANEVRLAEMNEIAMQLMSLGQTEAALKIQTQLQDLNQKWTSLQQLTAERATQLGSAH 87 (1321)
Q Consensus 9 ~~d~~~~~~~~~~~~~l~~e-l~~~~~~v~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~l 87 (1321)
|.+.+.++-+.+-.+.|.++ +..+..--..+...+..|..... .-...+..+.++-+.+...+..-.++++.+.
T Consensus 532 p~~~E~l~lL~~a~~vlreeYi~~~~~ar~ei~~rv~~Lk~~~e-----~Ql~~L~~l~e~~~~l~~~ae~LaeR~e~a~ 606 (717)
T PF10168_consen 532 PSPQECLELLSQATKVLREEYIEKQDLAREEIQRRVKLLKQQKE-----QQLKELQELQEERKSLRESAEKLAERYEEAK 606 (717)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777777777777776 34433333444444444433211 1122333344444444333333333333332
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHH
Q psy6493 88 EVQRFHRDVDETKDWIQEKDEALNNNDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRL 153 (1321)
Q Consensus 88 ~~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L 153 (1321)
. ..+.+...++..-..+....+..+..+ ++..++++.+...+..+++.++.+..+.+..
T Consensus 607 d------~Qe~L~~R~~~vl~~l~~~~P~LS~AE-r~~~~EL~~~~~~l~~l~~si~~lk~k~~~Q 665 (717)
T PF10168_consen 607 D------KQEKLMKRVDRVLQLLNSQLPVLSEAE-REFKKELERMKDQLQDLKASIEQLKKKLDYQ 665 (717)
T ss_pred H------HHHHHHHHHHHHHHHHhccCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 222333333333333333222222222 5556667777777777777777777666543
No 222
>PRK11281 hypothetical protein; Provisional
Probab=43.43 E-value=9.6e+02 Score=32.08 Aligned_cols=58 Identities=7% Similarity=0.055 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHhhhccCCc
Q psy6493 163 QTYAKQKEINEEWTQLTAKANTRKEKLLDSYD-LQRFLSDYRDLMSWINSMMGLVSSDE 220 (1321)
Q Consensus 163 ~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~-~~~f~~~~~~l~~wl~~~e~~l~~~~ 220 (1321)
.+++.+.++...-.+....+.+-...|-.... ..+=+..+.+...-+.+....+.+..
T Consensus 125 qLEq~L~q~~~~Lq~~Q~~La~~NsqLi~~qT~PERAQ~~lsea~~RlqeI~~~L~~~~ 183 (1113)
T PRK11281 125 QLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQIRNLLKGGK 183 (1113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 35555554444444444444444444433332 33344455555666666666665543
No 223
>KOG0169|consensus
Probab=42.36 E-value=3.7e+02 Score=33.06 Aligned_cols=96 Identities=17% Similarity=0.236 Sum_probs=71.0
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCH
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSS 1254 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 1254 (1321)
..+..|...|..++|.+...++..+...++..+ ++..+|..+..+ .+.++..++..|+.........+.
T Consensus 173 ~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp----------ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~~~ 241 (746)
T KOG0169|consen 173 KARRLFKESDNSQTGKLEEEEFVKFRKELTKRP----------EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDGATL 241 (746)
T ss_pred HHHHHHHHHHhhccceehHHHHHHHHHhhccCc----------hHHHHHHHHhCC-CCccCHHHHHHHHHHhcccccccH
Confidence 355566666778899999999999888877654 677788777544 789999999999877654455566
Q ss_pred HHHHHHHHHHcc----CCCCCcCHHHHHhhC
Q psy6493 1255 EEIENAFHAIAA----SDRPYVTKEELYANL 1281 (1321)
Q Consensus 1255 ~~~~~~F~~~D~----~~~G~I~~~el~~~l 1281 (1321)
+.+..++..+-. -..+.++.+.|..+|
T Consensus 242 ~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL 272 (746)
T KOG0169|consen 242 DEAEEIIERYEPSKEFRRHGLLSLDGFTRYL 272 (746)
T ss_pred HHHHHHHHHhhhhhhccccceecHHHHHHHh
Confidence 666666655522 356778999999966
No 224
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=41.98 E-value=1e+02 Score=26.58 Aligned_cols=66 Identities=14% Similarity=0.327 Sum_probs=39.3
Q ss_pred HHHHHhhhhccccCcCCCChHHHHHHHHH-------cCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1174 KEFSMMFKHFDKDKSGKLNQTEFKSCLRA-------LGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1174 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
.+++-+|..+ .|++|.++...|..+|.. +|..++ ... .+..++..|... ..+..|+..+|+..+..
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~a--Fg~-~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPA--FGY-IEPSVRSCFQQV--QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGG--GT---HHHHHHHHHHT--TT-S-B-HHHHHHHHHT
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCcccc--ccC-cHHHHHHHhccc--CCCCccCHHHHHHHHHh
Confidence 4578889888 577899999999888743 344331 111 455666677665 24567999999988754
No 225
>KOG0998|consensus
Probab=39.66 E-value=16 Score=46.43 Aligned_cols=72 Identities=24% Similarity=0.415 Sum_probs=61.3
Q ss_pred cCCCHHHHHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1166 SGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1166 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
..+++.....+.++|..+|.+.+|.|+..++...+...|.. ...+..++..+|..+.|.+++.+|.-.+..
T Consensus 275 ~~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~gl~---------~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~ 345 (847)
T KOG0998|consen 275 PKVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLPFGLS---------KPRLAHVWLLADTQNTGTLSKDEFALAMHL 345 (847)
T ss_pred cccChHHHHHHHHHHHhccccCCCcccccccccccccCCCC---------hhhhhhhhhhcchhccCcccccccchhhhh
Confidence 35677888889999999999999999999999988776654 467889999999999999999999876644
Q ss_pred h
Q psy6493 1246 K 1246 (1321)
Q Consensus 1246 ~ 1246 (1321)
+
T Consensus 346 ~ 346 (847)
T KOG0998|consen 346 L 346 (847)
T ss_pred h
Confidence 3
No 226
>KOG0978|consensus
Probab=35.65 E-value=9.5e+02 Score=29.79 Aligned_cols=52 Identities=12% Similarity=0.181 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHhcCCchHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy6493 34 VRLAEMNEIAMQLMSLGQTEAALKIQTQLQDLNQKWTSLQQLTAERATQLGSA 86 (1321)
Q Consensus 34 ~~v~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~ 86 (1321)
...+.+...++.+....+.... .+...-+.|...|..|...+......+...
T Consensus 23 ~~~D~lq~~~e~~~~~~~~~~e-~l~~~~~~L~~e~e~Lq~~~~~~~~~~~~~ 74 (698)
T KOG0978|consen 23 IQIDDLQTQAEELARRLNRVEE-ALTVLFDELAEENEKLQNLADHLQEKHATL 74 (698)
T ss_pred hhhHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444333222 455566667777777777776666555433
No 227
>PF03915 AIP3: Actin interacting protein 3; InterPro: IPR022782 This entry represents a domain found in yeast actin interacting protein 3 and bud site selection protein 6. In these proteins it is typically found towards the C terminus. It is also found in metazoan proteins, such as the mouse enhancer trap locus 4 protein. ; PDB: 3ONX_B 3OKQ_A.
Probab=35.37 E-value=7.7e+02 Score=28.65 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCC
Q psy6493 196 QRFLSDYRDLMSWINSMMGLVSSD 219 (1321)
Q Consensus 196 ~~f~~~~~~l~~wl~~~e~~l~~~ 219 (1321)
......+++|.++++.+..-+...
T Consensus 216 d~Ll~kVdDLQD~VE~LRkDV~~R 239 (424)
T PF03915_consen 216 DRLLTKVDDLQDLVEDLRKDVVQR 239 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 355667788888888777665443
No 228
>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function.
Probab=35.34 E-value=9.3e+02 Score=29.57 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy6493 332 DNVEALIKKHEDFDKAINAHEEKIGALQTLADQLI 366 (1321)
Q Consensus 332 ~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~ 366 (1321)
..++..-.+.+.+..++......+..|......+.
T Consensus 447 ~~ik~~r~~~k~~~~e~~~Kee~~~qL~~e~e~~~ 481 (594)
T PF05667_consen 447 QEIKELREEIKEIEEEIRQKEELYKQLVKELEKLP 481 (594)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44555555666666666666666666666555554
No 229
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].; PDB: 2EFR_A 2Z5H_C 2Z5I_D 2D3E_B 2EFS_D 3U59_B 1C1G_C 1IHQ_A 3AZD_B 1MV4_B ....
Probab=34.62 E-value=5.8e+02 Score=26.98 Aligned_cols=49 Identities=10% Similarity=0.080 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHhhhcc
Q psy6493 276 NLAEAREDLEKAWIARRMQLDQCLEL-QLFYRDCEQAENWMSAREAFLNA 324 (1321)
Q Consensus 276 ~l~~~~~~l~~~~~~r~~~L~~~~~~-~~f~~~~~~l~~wl~~~e~~l~~ 324 (1321)
.+...-+.....+..-...|...... ..+...+..+..-+...+..|..
T Consensus 5 ~l~~eld~~~~~~~~~~~~l~~~~~~~~~aE~e~~~l~rri~~lE~~le~ 54 (237)
T PF00261_consen 5 QLKDELDEAEERLEEAEEKLKEAEKRAEKAEAEVASLQRRIQLLEEELER 54 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333333333334444443332 45556666666666666665544
No 230
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []. Located at the C terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). These proteins also contain four coiled-coil domains [].
Probab=34.54 E-value=1.1e+03 Score=30.08 Aligned_cols=80 Identities=15% Similarity=0.238 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy6493 483 VQARLASIADQWEFLTQKTTEKSLKLKEANK-QRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADI 561 (1321)
Q Consensus 483 i~~~l~~l~~~w~~l~~~~~~r~~~L~~~~~-~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei 561 (1321)
++..++.|..+.+.-...+..+...+..+.. ...+...+.++.+-++..+..+ ..+..++..+...+
T Consensus 341 Lqsdve~Lr~rle~k~~~l~kk~~~~~~~qeE~~~~~~Ei~~l~d~~d~~e~ki------------~~Lq~kie~Lee~l 408 (775)
T PF10174_consen 341 LQSDVEALRFRLEEKNSQLEKKQAQIEKLQEEKSRLQGEIEDLRDMLDKKERKI------------NVLQKKIENLEEQL 408 (775)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHH
Confidence 4444444444444444444444444444442 4455555555555555544432 23334444445445
Q ss_pred HHHHHHHHHHHHH
Q psy6493 562 QAHDDRIKDMNGQ 574 (1321)
Q Consensus 562 ~~~~~~v~~l~~~ 574 (1321)
......+......
T Consensus 409 ~ekd~ql~~~k~R 421 (775)
T PF10174_consen 409 REKDRQLDEEKER 421 (775)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444443
No 231
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=33.74 E-value=27 Score=28.18 Aligned_cols=25 Identities=8% Similarity=0.274 Sum_probs=20.7
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHH
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCL 1200 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l 1200 (1321)
.+...|+.+ .++.++||..+|+..|
T Consensus 7 qv~~aFr~l-A~~KpyVT~~dLr~~l 31 (69)
T PF08726_consen 7 QVEEAFRAL-AGGKPYVTEEDLRRSL 31 (69)
T ss_dssp HHHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred HHHHHHHHH-HcCCCcccHHHHHHHc
Confidence 467889888 5677999999999875
No 232
>PHA02562 46 endonuclease subunit; Provisional
Probab=33.53 E-value=9.8e+02 Score=29.31 Aligned_cols=23 Identities=22% Similarity=0.147 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 699 LKLLNQAWSELKQLAANRGQKLD 721 (1321)
Q Consensus 699 l~~l~~~w~~l~~~~~~r~~~L~ 721 (1321)
...+..+...+...+..+...+.
T Consensus 332 ~~~~~~~i~el~~~i~~~~~~i~ 354 (562)
T PHA02562 332 FNEQSKKLLELKNKISTNKQSLI 354 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444433
No 233
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=33.45 E-value=48 Score=28.47 Aligned_cols=25 Identities=8% Similarity=0.357 Sum_probs=10.5
Q ss_pred HHHHHHhcCCCCCccccHHHHHHHHh
Q psy6493 1219 FEAILDLVDPNRDGHVSLQEYMAFMI 1244 (1321)
Q Consensus 1219 ~~~~~~~~d~~~~g~i~~~ef~~~~~ 1244 (1321)
.+.+|..+ .|.+|.++...|-.++.
T Consensus 5 yRylFsli-sd~~g~~~~~~l~~lL~ 29 (90)
T PF09069_consen 5 YRYLFSLI-SDSNGCMDQRKLGLLLH 29 (90)
T ss_dssp HHHHHHHH-S-TTS-B-HHHHHHHHH
T ss_pred HHHHHHHH-cCCCCCCcHHHHHHHHH
Confidence 34444444 23445555555555543
No 234
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=33.40 E-value=1.1e+03 Score=29.69 Aligned_cols=60 Identities=18% Similarity=0.222 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy6493 514 QRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDS 581 (1321)
Q Consensus 514 ~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~ 581 (1321)
+..+...+..+..-+...+..+... |++ .+..-..++.++................+...
T Consensus 232 i~~l~~ele~a~~~l~~l~~~~~~~--GG~------~~~~r~~Le~ei~~le~e~~e~~~~l~~l~~~ 291 (650)
T TIGR03185 232 IAHLRNELEEAQRSLESLEKKFRSE--GGD------LFEEREQLERQLKEIEAARKANRAQLRELAAD 291 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--cch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4455555566666666665555332 333 23334556666666666666666666666544
No 235
>cd00179 SynN Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may be identified by a specific member of the syntaxin family; syntaxins contain a moderately well conserved amino-terminal domain, called Habc, whose structure is an antiparallel three-helix bundle; a linker of about 30 amino acids connects this to the carboxy-terminal region, designated H3 (t_SNARE), of the syntaxin cytoplasmic domain; the highly conserved H3 region forms a single, long alpha-helix when it is part of the core SNARE complex and anchors the protein on the cytoplasmic surface of cellular membranes; H3 is not included in defining this domain
Probab=33.20 E-value=4.5e+02 Score=25.26 Aligned_cols=66 Identities=23% Similarity=0.259 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcchhhcHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 982 ALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELA 1048 (1321)
Q Consensus 982 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~ 1048 (1321)
........+...|......+..|..+...+..... ..+.+...++.+...-..+...+..+.+.|.
T Consensus 3 ~F~~~v~~I~~~i~~i~~~v~~l~~l~~~~~t~~~-~~~~~~~~l~~~~~~~~~~~~~ik~~lk~l~ 68 (151)
T cd00179 3 EFFEEVEEIRGNIDKISEDVEELQKLHSQLLTAPD-ADPELKQELESLVQEIKKLAKEIKGKLKELE 68 (151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566677777777777777777777655421 1233444555555555555555555544444
No 236
>KOG0976|consensus
Probab=32.66 E-value=1e+03 Score=29.37 Aligned_cols=79 Identities=22% Similarity=0.306 Sum_probs=39.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHh---HHHHHHHHHHhhhhhcCCcCCCCHHHHHHHHHHh
Q psy6493 585 DASSIQEKRQSINERYERIKNLAAHRQARLNEANT-LHQFFRD---IADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKH 660 (1321)
Q Consensus 585 ~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~-~~~f~~~---~~~~~~Wl~~~~~~l~~~~~~~~~~~~~~~~~~~ 660 (1321)
++..|.+....+.....+|.....+|...++.... ...|... -+..-.=|.++...+.. .+..+..+..++..+
T Consensus 366 dvr~i~e~k~nve~elqsL~~l~aerqeQidelKn~if~~e~~~~dhe~~kneL~~a~ekld~--mgthl~mad~Q~s~f 443 (1265)
T KOG0976|consen 366 DVRSIQEKKENVEEELQSLLELQAERQEQIDELKNHIFRLEQGKKDHEAAKNELQEALEKLDL--MGTHLSMADYQLSNF 443 (1265)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccchhHHHHHHHHHHHHHHHH--HhHHHHHHHHHHhhH
Confidence 45566666666666666666666666666665544 3333322 11122223333332221 233444555555555
Q ss_pred HHHHH
Q psy6493 661 KRLEA 665 (1321)
Q Consensus 661 ~~l~~ 665 (1321)
+.|..
T Consensus 444 k~Lke 448 (1265)
T KOG0976|consen 444 KVLKE 448 (1265)
T ss_pred HHHHH
Confidence 55544
No 237
>PF11802 CENP-K: Centromere-associated protein K; InterPro: IPR020993 Cenp-K is one of seven new Cenp-A-nucleosome distal (CAD) centromere components (the others being Cenp-L, Cenp-O, Cenp-P, Cenp-Q, Cenp-R and Cenp-S) that are identified as assembling on the Cenp-A nucleosome associated complex, NAC []. The Cenp-A NAC is essential, as disruption of the complex causes errors of chromosome alignment and segregation that preclude cell survival despite continued centromere-derived mitotic checkpoint signalling. Cenp-K is centromere-associated through its interaction with one or more components of the Cenp-A NAC.; GO: 0005634 nucleus
Probab=32.63 E-value=6.4e+02 Score=26.88 Aligned_cols=121 Identities=16% Similarity=0.185 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhhcCCCchHHHHHHHH
Q psy6493 731 AKVEEEEAWISEKQQLLS---VEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQ 807 (1321)
Q Consensus 731 ~~~~el~~wl~~~e~~l~---~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~ 807 (1321)
..++++..-+.+..+.|+ +.+++.+-..+.-.+-+.+.+..++...+.....+...-..++. ......++.
T Consensus 23 ~eCEe~wk~me~~q~kL~l~~~e~l~~s~~ql~ll~~~~k~L~aE~~qwqk~~peii~~n~~VL~------~lgkeelqk 96 (268)
T PF11802_consen 23 KECEELWKDMEECQNKLSLIGTETLTDSDAQLSLLMMRVKCLTAELEQWQKRTPEIIPLNPEVLL------TLGKEELQK 96 (268)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCcCCCCHHHHH------HHHHHHHHH
Confidence 334444444444444443 23444444455566677777777777766655443333222222 245677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhHHhhhcccc
Q psy6493 808 LQLKLDNLMALATKRKTKLMDNSA-YLQFMWKADVVESWIADKETHVKSEE 857 (1321)
Q Consensus 808 l~~~~~~l~~~~~~r~~~Le~~~~-~~~~~~~~~~l~~wl~~~e~~l~~~~ 857 (1321)
+..-.+.+......+...|+..+. -+++..+.+.+..-|......+.+..
T Consensus 97 l~~eLe~vLs~~q~KnekLke~LerEq~wL~Eqqql~~sL~~r~~elk~~~ 147 (268)
T PF11802_consen 97 LISELEMVLSTVQSKNEKLKEDLEREQQWLDEQQQLLESLNKRHEELKNQV 147 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888888888888899999988774 45777888888888877777776543
No 238
>PHA02562 46 endonuclease subunit; Provisional
Probab=32.33 E-value=1e+03 Score=29.15 Aligned_cols=27 Identities=19% Similarity=0.436 Sum_probs=13.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 57 KIQTQLQDLNQKWTSLQQLTAERATQLG 84 (1321)
Q Consensus 57 ~i~~~l~~l~~~w~~l~~~~~~r~~~L~ 84 (1321)
.+-..+-.+. .|..+.....++...++
T Consensus 154 ~il~~l~~~~-~~~~~~~~~k~~~~e~~ 180 (562)
T PHA02562 154 KLVEDLLDIS-VLSEMDKLNKDKIRELN 180 (562)
T ss_pred HHHHHHhCCH-HHHHHHHHHHHHHHHHH
Confidence 4444444443 45555555555554443
No 239
>KOG3647|consensus
Probab=31.16 E-value=6.4e+02 Score=26.43 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=30.4
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q psy6493 1024 FTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAF 1071 (1321)
Q Consensus 1024 ~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~~f~~~~~~l 1071 (1321)
.+++++..--..|...+..|...|+....|+...+..+-.|.+.++.+
T Consensus 126 ~~Lnnvasdea~L~~Kierrk~ElEr~rkRle~LqsiRP~~MdEyE~~ 173 (338)
T KOG3647|consen 126 AQLNNVASDEAALGSKIERRKAELERTRKRLEALQSIRPAHMDEYEDC 173 (338)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 456666667777888888888888877766655444444443333333
No 240
>PF05377 FlaC_arch: Flagella accessory protein C (FlaC); InterPro: IPR008039 Although archaeal flagella appear superficially similar to those of bacteria, they are quite distinct []. In several archaea, the flagellin genes are followed immediately by the flagellar accessory genes flaCDEFGHIJ. The gene products may have a role in translocation, secretion, or assembly of the flagellum. FlaC is a protein whose exact role is unknown but it has been shown to be membrane-associated (by immuno-blotting fractionated cells) [].
Probab=30.92 E-value=1.9e+02 Score=22.16 Aligned_cols=37 Identities=11% Similarity=0.165 Sum_probs=24.6
Q ss_pred cccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHH
Q psy6493 1086 TGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEE 1122 (1321)
Q Consensus 1086 ~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~ 1122 (1321)
...+...-....++...++....++..+-.++.....
T Consensus 13 ~~~i~tvk~en~~i~~~ve~i~envk~ll~lYE~Vs~ 49 (55)
T PF05377_consen 13 ESSINTVKKENEEISESVEKIEENVKDLLSLYEVVSN 49 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3344444455666667888888888888887766544
No 241
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=29.79 E-value=1.2e+03 Score=29.27 Aligned_cols=211 Identities=16% Similarity=0.224 Sum_probs=0.0
Q ss_pred CHHHHHHHHHhhHhHHHHHhhhHHHHHHHHHHHHHHHhcCCchHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-H
Q psy6493 11 DLEQVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQLMSLGQTEAALKIQTQLQDLNQKWTSLQQLTAERATQLGSAHE-V 89 (1321)
Q Consensus 11 d~~~~~~~~~~~~~l~~el~~~~~~v~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~l~-~ 89 (1321)
|+..++.-++..+..++|+...-..+..-......-+...--+.. .++.++..|...-..=...+..-.++|..-.. -
T Consensus 426 dvkkLraeLq~~Rq~E~ELRsqis~l~~~Er~lk~eL~qlr~ene-~Lq~Kl~~L~~aRq~DKq~l~~LEkrL~eE~~~R 504 (697)
T PF09726_consen 426 DVKKLRAELQSSRQSEQELRSQISSLTNNERSLKSELSQLRQENE-QLQNKLQNLVQARQQDKQSLQQLEKRLAEERRQR 504 (697)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHhhccccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHhHHHHHHHHHHHHhhcCCC---------CCCCChH-HHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHh---
Q psy6493 90 QRFHRDVDETKDWIQEKDEALNNN---------DLGKDLR-SVQALQRKHEGLERDLAALGDKIRQLDETANRLMQT--- 156 (1321)
Q Consensus 90 ~~f~~~~~~~~~wl~~~e~~l~~~---------~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~~~--- 156 (1321)
...+..+..-..-=...+...... +.+.... ..+.+-.+++.|..++...+..+..+...+..|...
T Consensus 505 ~~lEkQL~eErk~r~~ee~~aar~~~~~~~~r~e~~e~~r~r~~~lE~E~~~lr~elk~kee~~~~~e~~~~~lr~~~~e 584 (697)
T PF09726_consen 505 ASLEKQLQEERKARKEEEEKAARALAQAQATRQECAESCRQRRRQLESELKKLRRELKQKEEQIRELESELQELRKYEKE 584 (697)
T ss_pred HHHHHHHHHHHHHHhHHHHhhhhccccchhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHhhhccCCcc
Q psy6493 157 HPETAEQTYAKQKEINEEWTQLTAKA--------------NTRKEKLLDSYD-LQRFLSDYRDLMSWINSMMGLVSSDEL 221 (1321)
Q Consensus 157 ~~~~~~~l~~~~~~l~~~w~~l~~~~--------------~~r~~~L~~~~~-~~~f~~~~~~l~~wl~~~e~~l~~~~~ 221 (1321)
.+.+.+.+...+..+.+.=..|..-+ .+-+..|+.+.. +..=...+.+|..-|.++.+.|.....
T Consensus 585 ~~~~~e~L~~aL~amqdk~~~LE~sLsaEtriKldLfsaLg~akrq~ei~~~~~~~~d~ei~~lk~ki~~~~av~p~~~~ 664 (697)
T PF09726_consen 585 SEKDTEVLMSALSAMQDKNQHLENSLSAETRIKLDLFSALGDAKRQLEIAQGQLRKKDKEIEELKAKIAQLLAVMPSDSY 664 (697)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q ss_pred c
Q psy6493 222 A 222 (1321)
Q Consensus 222 ~ 222 (1321)
+
T Consensus 665 ~ 665 (697)
T PF09726_consen 665 C 665 (697)
T ss_pred c
No 242
>KOG3958|consensus
Probab=29.62 E-value=7.2e+02 Score=26.56 Aligned_cols=173 Identities=14% Similarity=0.247 Sum_probs=0.0
Q ss_pred HHhHHHHHHHHHhHHHHHHHHHHHHhhcCC----CCCCCChHHHHHHHHHHHHHH-HHHHHhHhHHHHHHHHHHHHHHhC
Q psy6493 83 LGSAHEVQRFHRDVDETKDWIQEKDEALNN----NDLGKDLRSVQALQRKHEGLE-RDLAALGDKIRQLDETANRLMQTH 157 (1321)
Q Consensus 83 L~~~l~~~~f~~~~~~~~~wl~~~e~~l~~----~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~~v~~l~~~~~~L~~~~ 157 (1321)
+..+-.+..+...+..+..-+.--....+. .+...-++.|+.+.-+...+. .-+...+.++.++..+...+.+.+
T Consensus 187 ~s~~akVA~LE~Rlt~lE~vvg~~~d~~~~lsa~~~~a~vletVe~L~~k~s~l~~~~ld~vEqRL~s~lgK~~~IaEk~ 266 (371)
T KOG3958|consen 187 FSQAAKVAELEKRLTELETVVGCDQDAQNPLSAGLQGACVLETVELLQAKVSALDLAVLDQVEQRLQSVLGKVNEIAEKH 266 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccCchhhccCCchHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhh
Q ss_pred CCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHH
Q psy6493 158 PET-----AEQTYAKQKEINEEWTQLTAKANTRKEKLLDSYDLQRFLSDYRDLMSWINSMMGLVSSDELANDVTGAEALL 232 (1321)
Q Consensus 158 ~~~-----~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l 232 (1321)
... ...=-..+-++.+||.-+...+-.--.++.....++.+...+..+..-|+.....+.. .-....+-..
T Consensus 267 ~~s~~Da~~d~KV~elye~~qrw~pi~stLP~~V~rl~al~~LHeqa~~Fa~~lthl~t~q~~i~~----sl~~n~ell~ 342 (371)
T KOG3958|consen 267 KASVEDADTDSKVHELYETIQRWSPIASTLPELVQRLVALKQLHEQAMQFAQLLTHLDTTQQMIAN----SLKDNTELLT 342 (371)
T ss_pred ccccccchhhhhHHHHHHHHHhhhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhcchHHHH
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHH
Q psy6493 233 ERHQEHRTEIDARTGTFQAFDLFGQQL 259 (1321)
Q Consensus 233 ~~~~~l~~el~~~~~~~~~l~~~g~~l 259 (1321)
+-...+...+..-...+..+......|
T Consensus 343 ~vqtt~~qnl~tV~~k~a~ie~rva~l 369 (371)
T KOG3958|consen 343 QVQTTMRQNLATVEGKFASIEERVAKL 369 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
No 243
>PF11887 DUF3407: Protein of unknown function (DUF3407); InterPro: IPR024516 This entry represents a domain of unknown function found at the C terminus of many proteins in the mammalian cell entry family.
Probab=29.55 E-value=7.1e+02 Score=26.91 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=7.7
Q ss_pred hHHHHHHHHHHHHHHHHH
Q psy6493 57 KIQTQLQDLNQKWTSLQQ 74 (1321)
Q Consensus 57 ~i~~~l~~l~~~w~~l~~ 74 (1321)
.|...+..++.--..|..
T Consensus 32 ~lg~~l~~l~~~l~~ln~ 49 (267)
T PF11887_consen 32 QLGETLDDLNTLLATLNP 49 (267)
T ss_pred hHHHHHHHHHHHHHHHhc
Confidence 344444444444433333
No 244
>PF06320 GCN5L1: GCN5-like protein 1 (GCN5L1); InterPro: IPR009395 This family consists of several eukaryotic GCN5-like protein 1 (GCN5L1) sequences. The function of this family is unknown [,].
Probab=29.53 E-value=4.4e+02 Score=24.35 Aligned_cols=52 Identities=15% Similarity=0.323 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHhhcC
Q psy6493 57 KIQTQLQDLNQKWTSLQQLTAERATQLGSAHEVQRFHRDVDETKDWIQEKDEALN 111 (1321)
Q Consensus 57 ~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~l~~~~f~~~~~~~~~wl~~~e~~l~ 111 (1321)
.|..+...|......|...........+.. ..=..+++++.+|...++..+.
T Consensus 51 ~ie~e~k~L~~~~~~l~kqt~qw~~~~~~~---~~~LKEiGDveNWa~~iE~Dl~ 102 (121)
T PF06320_consen 51 KIEKEAKQLQRNTAKLAKQTDQWLKLVDSF---NDALKEIGDVENWAEMIERDLR 102 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhccHHHHHHHHHHHHH
Confidence 788888888888888877776655544433 4445677889999887776553
No 245
>PF04157 EAP30: EAP30/Vps36 family; InterPro: IPR007286 EAP30 is a subunit of the ELL complex. The ELL is an 80kDa RNA polymerase II transcription factor. ELL interacts with three other proteins to form the complex known as ELL complex. The ELL complex is capable of increasing that catalytic rate of transcription elongation, but is unable to repress initiation of transcription by RNA polymerase II as is the case of ELL. EAP30 is thought to lead to the derepression of ELL's transcriptional inhibitory activity. ; PDB: 2ZME_A 3CUQ_A 1W7P_D 1U5T_B.
Probab=28.86 E-value=2.4e+02 Score=29.45 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=48.4
Q ss_pred HHHHHHHHHcCCCCCcccC----CC-Cc-hHH-------HHHHHhcCCCCCccccHHHHHHHHhhhh-hcccCCHHHHHH
Q psy6493 1194 TEFKSCLRALGYDLPMVEE----GQ-PD-PEF-------EAILDLVDPNRDGHVSLQEYMAFMISKE-TENVQSSEEIEN 1259 (1321)
Q Consensus 1194 ~e~~~~l~~~~~~~~~~~~----~~-~~-~~~-------~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~~~~~~~~~~~ 1259 (1321)
.+|..++.++|.+|+.... .. +. ... -+++...-..+.|-|+..+..+.+.+.. .....+.+++..
T Consensus 61 ~~f~~~~~~lGvdp~~s~~~~s~~l~~~~~f~~ELa~qi~e~c~~~~~~~GGii~L~dl~~~~nr~R~g~~lISp~Di~~ 140 (223)
T PF04157_consen 61 SQFQSMCASLGVDPLASSKFWSESLKGSGDFYYELAVQIAEVCLATRSKNGGIISLSDLYCRYNRARGGSELISPEDILR 140 (223)
T ss_dssp HHHHHHHHHHT--CHCCTTCCCCCCSCHHHHHHHHHHHHHHHHHHHCCTTTSEEEHHHHHHHHHHCTTTSST--HHHHHH
T ss_pred HHHHHHHHHcCCCcccchhhhhhccccchhHHHHHHHHHHHHHHHHHhcCCCEEEHHHHHHHHHHhcccCCCcCHHHHHH
Confidence 4778888888887654322 00 11 111 1222222334557899999998887654 334567788888
Q ss_pred HHHHHccCCCCCcCHHHHH
Q psy6493 1260 AFHAIAASDRPYVTKEELY 1278 (1321)
Q Consensus 1260 ~F~~~D~~~~G~I~~~el~ 1278 (1321)
+...+.+-|.| +..-.|.
T Consensus 141 A~~~l~~lg~g-~~l~~~~ 158 (223)
T PF04157_consen 141 ACKLLEVLGLG-FRLRKFG 158 (223)
T ss_dssp HHHHHCCCTSS-EEEEEET
T ss_pred HHHHHHHcCCC-eEEEEeC
Confidence 88888888777 4444444
No 246
>KOG4302|consensus
Probab=28.66 E-value=1.2e+03 Score=28.82 Aligned_cols=173 Identities=17% Similarity=0.156 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHH-HHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHHHHHHHH
Q psy6493 163 QTYAKQKEINEEWTQLTAKANTRKEKLLDSYD-LQRF-LSDYRDLMSWINSMMGLVSSDELANDVTGAEALLERHQEHRT 240 (1321)
Q Consensus 163 ~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~-~~~f-~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~ 240 (1321)
.....+.+|..-|+.+...-.+|...|...-. +..+ ...++++..-. ..+..
T Consensus 15 t~~~~~~eL~~IW~~igE~~~e~d~~l~~le~e~~~~y~~kve~a~~~~--------------------------~~L~~ 68 (660)
T KOG4302|consen 15 TCGNLLNELQKIWDEIGESETERDKKLLRLEQECLEIYKRKVEEASESK--------------------------ARLLQ 68 (660)
T ss_pred HHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------HHHHH
Confidence 34556677899999999999999988876654 4433 22222221111 11112
Q ss_pred HHhhccchHHHHHHHHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy6493 241 EIDARTGTFQAFDLFGQQLLQSGH---YASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLELQLFYRDCEQAENWMSA 317 (1321)
Q Consensus 241 el~~~~~~~~~l~~~g~~l~~~~~---~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~ 317 (1321)
+|...+..+..+...-......+. .....+...+..|...-..+...-.+|...+...+. .+..+..-|..
T Consensus 69 ~ia~~eael~~l~s~l~~~~~~~~~~~k~e~tLke~l~~l~~~le~lr~qk~eR~~ef~el~~------qie~l~~~l~g 142 (660)
T KOG4302|consen 69 EIAVIEAELNDLCSALGEPSIIGEISDKIEGTLKEQLESLKPYLEGLRKQKDERRAEFKELYH------QIEKLCEELGG 142 (660)
T ss_pred HHHHHHHHHHHHHHHhCCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHhcC
Confidence 222222212221111100000001 112246777777777777777777777666655443 23333333332
Q ss_pred HHhh---hccCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q psy6493 318 REAF---LNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIA 367 (1321)
Q Consensus 318 ~e~~---l~~~~~~~~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~ 367 (1321)
-+.. +...+..-+...+..+...+..++++-..+-..+..+......|..
T Consensus 143 ~~~~~~~~~~D~~dlsl~kLeelr~~L~~L~~ek~~Rlekv~~~~~~I~~l~~ 195 (660)
T KOG4302|consen 143 PEDLPSFLIADESDLSLEKLEELREHLNELQKEKSDRLEKVLELKEEIKSLCS 195 (660)
T ss_pred CccCCcccccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111 1111223356778888888888888888887788777777776653
No 247
>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]
Probab=28.64 E-value=7.9e+02 Score=26.69 Aligned_cols=267 Identities=15% Similarity=0.202 Sum_probs=0.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 540 SGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDS---GQFDASSIQEKRQSINERYERIKNLAAHRQARLNE 616 (1321)
Q Consensus 540 ~~~d~~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~---~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~ 616 (1321)
....+..+..+..+...+...+..+...-+.+...+..+.+. -..-+..+...+..+..+.+.+...+.........
T Consensus 1 ~~~~~~~~~E~e~K~~~lk~~~~e~~ekR~El~~~~~~~~ekRdeln~kvrE~~e~~~elr~~rdeineev~elK~kR~e 80 (294)
T COG1340 1 SLAMLDKLDELELKRKQLKEEIEELKEKRDELRKEASELAEKRDELNAKVRELREKAQELREERDEINEEVQELKEKRDE 80 (294)
T ss_pred CchHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHH-HHHHHHhHHHHHHHHHHhhhhhcCCcCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhhcCCCCchHH
Q psy6493 617 ANT-LHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEI 695 (1321)
Q Consensus 617 ~~~-~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~~~~~~~~~i 695 (1321)
... +...+..+..+..-.+... ++..++..--..++.+...++...-....-...|..+......|-. .......
T Consensus 81 in~kl~eL~~~~~~l~e~~~~~~--~~~~~~~~ler~i~~Le~~~~T~~L~~e~E~~lvq~I~~L~k~le~--~~k~~e~ 156 (294)
T COG1340 81 INAKLQELRKEYRELKEKRNEFN--LGGRSIKSLEREIERLEKKQQTSVLTPEEERELVQKIKELRKELED--AKKALEE 156 (294)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhh--ccCCCHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH--HHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhc--CCCCCCCHHHHHHHHHHHHHHHHH
Q psy6493 696 EQRLKLLNQAWSELKQLAANRGQKLDESL-TYQHFLAKVEEEEAWISEKQQLLS--VEDYGDTMAAVQGLLKKHDAFETD 772 (1321)
Q Consensus 696 ~~~l~~l~~~w~~l~~~~~~r~~~L~~~~-~~~~f~~~~~el~~wl~~~e~~l~--~~~~~~~~~~~~~~l~~~~~~~~~ 772 (1321)
...+..|...-..+...+......+.... +.+.|++.+.++..=..+...... +..+..-...+..+-..+..++.+
T Consensus 157 ~~~~~el~aei~~lk~~~~e~~eki~~la~eaqe~he~m~k~~~~~De~Rkeade~he~~ve~~~~~~e~~ee~~~~~~e 236 (294)
T COG1340 157 NEKLKELKAEIDELKKKAREIHEKIQELANEAQEYHEEMIKLFEEADELRKEADELHEEFVELSKKIDELHEEFRNLQNE 236 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q ss_pred HHhhHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHH
Q psy6493 773 FSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKL 812 (1321)
Q Consensus 773 l~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~~ 812 (1321)
|......+..+...-.........+ .+..+...+..++
T Consensus 237 lre~~k~ik~l~~~~~~~~~~~~~e--e~kera~ei~EKf 274 (294)
T COG1340 237 LRELEKKIKALRAKEKAAKRREKRE--ELKERAEEIYEKF 274 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
No 248
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [].
Probab=28.53 E-value=8.7e+02 Score=27.17 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy6493 330 KTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQ 364 (1321)
Q Consensus 330 ~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~ 364 (1321)
+...+...-..+.....++...+..+..+...-..
T Consensus 207 D~~eL~~lr~eL~~~~~~i~~~k~~l~el~~el~~ 241 (325)
T PF08317_consen 207 DQEELEALRQELAEQKEEIEAKKKELAELQEELEE 241 (325)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666666666666666555555555554444
No 249
>PRK10361 DNA recombination protein RmuC; Provisional
Probab=27.42 E-value=1.1e+03 Score=27.90 Aligned_cols=139 Identities=12% Similarity=0.199 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy6493 977 IEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDE 1056 (1321)
Q Consensus 977 ~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~ 1056 (1321)
+.....+..++......+.........+......+... ..........+..+..+++.......++...|+.+.
T Consensus 35 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~le~~~~~~~ek~~~l~~~~----- 108 (475)
T PRK10361 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSL-QSINTSLEADLREVTTRMEAAQQHADDKIRQMINSE----- 108 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q ss_pred hHHHHHHHHHHHHHHHH-----HHHHHHHhhhcccccHHHHHHHHHHHHHHHH--------hhhhhHHHHHHhhHHHHH
Q psy6493 1057 NDALRKEFAKHANAFHQ-----WLTETRTSMMEGTGSLEQQLEAIKRKAAEVR--------SRRSDLKKIEDLGAILEE 1122 (1321)
Q Consensus 1057 ~~~~~~~f~~~~~~l~~-----wl~~~~~~~~~~~~~l~~ql~~~~~l~~ei~--------~~~~~~~~~~~~~~~l~~ 1122 (1321)
+.+..+|.+.+..+.+ +.......+.....++.++|..++.-..++. .+...+..+.+....|..
T Consensus 109 -~~L~~~F~~LA~~ile~k~~~f~~~~~~~l~~ll~Pl~e~l~~f~~~v~~~~~~~~~~~~~L~~qi~~L~~~n~~i~~ 186 (475)
T PRK10361 109 -QRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLAHEIRNLQQLNAQMAQ 186 (475)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 250
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=27.15 E-value=1.6e+03 Score=29.93 Aligned_cols=56 Identities=5% Similarity=0.204 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHhHHHHHHHHHHHHhhcCC
Q psy6493 57 KIQTQLQDLNQKWTSLQQLTAERATQLGSAHE-VQRFHRDVDETKDWIQEKDEALNN 112 (1321)
Q Consensus 57 ~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~l~-~~~f~~~~~~~~~wl~~~e~~l~~ 112 (1321)
.+++++......-..+.....+...++..... .+..-+.......-+.+....+..
T Consensus 106 ~Leq~l~~~~~~L~~~q~~l~~~~~~~~~~~~~l~~~pq~~~~~~~~l~~i~~~L~~ 162 (1109)
T PRK10929 106 ALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQT 162 (1109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHhC
Confidence 45555555555544444444444444433221 222223335666677777777665
No 251
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].
Probab=27.05 E-value=6.2e+02 Score=25.56 Aligned_cols=109 Identities=20% Similarity=0.363 Sum_probs=0.0
Q ss_pred HHHHHhHHH-HHHHHHhHHHHHHHHHHHHhhcCC--CCCCCChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHh
Q psy6493 80 ATQLGSAHE-VQRFHRDVDETKDWIQEKDEALNN--NDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRLMQT 156 (1321)
Q Consensus 80 ~~~L~~~l~-~~~f~~~~~~~~~wl~~~e~~l~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~~~ 156 (1321)
...+...-. +..+..+++++..++.+....+.. ..........+....+...+...+......+..+. .....
T Consensus 80 ~~e~~~~~~~l~~l~~el~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~e~~~l~----~~~~~ 155 (191)
T PF04156_consen 80 QGELSELQQQLQQLQEELDQLQERIQELESELEKLKEDLQELRELLKSVEERLDSLDESIKELEKEIRELQ----KELQD 155 (191)
T ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHH
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy6493 157 HPETAEQTYAKQKEINEEWTQLTAKANTRKEKLLDS 192 (1321)
Q Consensus 157 ~~~~~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~ 192 (1321)
...........+..+...+.++.....+....++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 191 (191)
T PF04156_consen 156 SREEVQELRSQLERLQENLQQLEEKIQELQELLEQL 191 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
No 252
>COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning]
Probab=26.15 E-value=1.1e+03 Score=27.77 Aligned_cols=55 Identities=18% Similarity=0.360 Sum_probs=29.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy6493 347 AINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQ 405 (1321)
Q Consensus 347 ~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~ 405 (1321)
.+......+..+......|+.+... -...+......|..+...+..++..+..+.
T Consensus 112 ~l~~iE~~i~~il~~l~~Lv~sEek----N~~~i~~~~ely~elr~~vl~n~~~~Ge~~ 166 (570)
T COG4477 112 QLTLIEEDIEQILEDLNELVESEEK----NSEEIDHVLELYEELRRDVLANRHQYGEAA 166 (570)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 3334444444455545555443221 224455666777777777766666655543
No 253
>PF09660 DUF2397: Protein of unknown function (DUF2397); InterPro: IPR013493 Proteins in this family are encoded within a conserved gene four-gene neighbourhood found sporadically in a phylogenetically broad range of bacteria including: Nocardia farcinica, Symbiobacterium thermophilum, Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1)) and Ralstonia solanacearum (Betaproteobacteria).
Probab=26.11 E-value=1.2e+03 Score=27.91 Aligned_cols=79 Identities=11% Similarity=0.138 Sum_probs=57.9
Q ss_pred CCCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Q psy6493 1016 VGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEGTGSLEQQLEA 1095 (1321)
Q Consensus 1016 ~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~~~~~f~~~~~~l~~wl~~~~~~~~~~~~~l~~ql~~ 1095 (1321)
.++...+...+..|...+..|.....+-...|....... ......|....+.|...|......+......|+..|..
T Consensus 139 ~~d~~~~~~~w~~L~~~f~~L~~na~df~~~L~~~~~~~---~~~~e~Fl~yKd~Li~YL~~Fv~~L~r~~~~I~~~l~~ 215 (486)
T PF09660_consen 139 EGDAAEVYEWWRDLFEDFERLAQNAQDFYASLQSVKAEE---DMDTEAFLAYKDALIDYLRRFVQDLQRRAPRIAAALRE 215 (486)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---ccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344445567889999999999999999999998877433 23456788888888888888876666556666655544
Q ss_pred HH
Q psy6493 1096 IK 1097 (1321)
Q Consensus 1096 ~~ 1097 (1321)
+.
T Consensus 216 l~ 217 (486)
T PF09660_consen 216 LE 217 (486)
T ss_pred cc
Confidence 43
No 254
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5
Probab=26.03 E-value=1.3e+03 Score=28.45 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=44.1
Q ss_pred CchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 435 DPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCV-GSEEAVQARLASIADQWEFLTQKTTEKSLKLKE 510 (1321)
Q Consensus 435 d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~-~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~~ 510 (1321)
|-.++...+..-+.|...+...+..+-.+....-.|....... -....+..++..+...|..+...+..+...+..
T Consensus 151 dk~t~SRAlsQN~eLK~QL~Elq~~Fv~ltne~~elt~~lq~Eq~~~keL~~kl~~l~~~l~~~~e~le~K~qE~~~ 227 (617)
T PF15070_consen 151 DKATASRALSQNRELKEQLAELQDAFVKLTNENMELTSALQSEQHVKKELQKKLGELQEKLHNLKEKLELKSQEAQS 227 (617)
T ss_pred cchHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3344455555556666666666666666655543332221110 012357788888888898888888776554433
No 255
>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed. It is a novel binding partner of several syntaxin family members and is possibly involved in Ca(2+)-dependent exocytosis in neuroendocrine cells []. Gamma-taxilin, described as leucine zipper protein Factor Inhibiting ATF4-mediated Transcription (FIAT), localises to the nucleus in osteoblasts and dimerises with ATF4 to form inactive dimers, thus inhibiting ATF4-mediated transcription [].
Probab=25.91 E-value=9.4e+02 Score=26.67 Aligned_cols=267 Identities=12% Similarity=0.136 Sum_probs=0.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q psy6493 540 SGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLN---- 615 (1321)
Q Consensus 540 ~~~d~~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le---- 615 (1321)
++++.+.+....+++..+..+.......+......+..+..........+. +...+......||.-+......+.
T Consensus 17 l~~~eeK~~~L~kk~~ell~e~k~~~k~~~~~~Kk~~~l~kek~~l~~E~~-k~~~~k~KLE~LCRELQk~Nk~lkeE~~ 95 (309)
T PF09728_consen 17 LSSPEEKLEALCKKYAELLEEMKRLQKQLKKLQKKQEQLQKEKDQLQSELS-KAILAKSKLESLCRELQKQNKKLKEESK 95 (309)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred -------HHHH--HHHHHHhHHHHHHHHHHhhhhhcCCcCCCCHHHHHHHHHHhHHHHHHHHhchHHHHHHHHHHHHhhh
Q psy6493 616 -------EANT--LHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMD 686 (1321)
Q Consensus 616 -------~~~~--~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~~~~~~~~L~~ 686 (1321)
.... ...|...+.++..-|.+ .+.+.......-..+..+++.|......++..+..+...-+.=+.
T Consensus 96 ~~~~eee~kR~el~~kFq~~L~dIq~~~ee-----~~~~~~k~~~eN~~L~eKlK~l~eQye~rE~~~~~~~k~keLE~Q 170 (309)
T PF09728_consen 96 RRAREEEEKRKELSEKFQATLKDIQAQMEE-----QSERNIKLREENEELREKLKSLIEQYELREEHFEKLLKQKELEVQ 170 (309)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHH
Q psy6493 687 VSNLGVPEIEQRLKLLNQAWSELKQ-------LAANRGQKLDESL-TYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAA 758 (1321)
Q Consensus 687 ~~~~~~~~i~~~l~~l~~~w~~l~~-------~~~~r~~~L~~~~-~~~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~ 758 (1321)
....-.......+..-..+...+.. .+......-...- ++.-|....+++.+-|......+.+- -.+
T Consensus 171 l~~AKl~q~~~~~~~e~~k~~~~~~~~l~~~~~~~~~~~~E~~Lr~QL~~Y~~Kf~efq~tL~kSNe~F~tf-----k~E 245 (309)
T PF09728_consen 171 LAEAKLEQQQEEAEQEKEKAKQEKEILLEEAAQVQTLKETEKELREQLNLYSEKFEEFQDTLNKSNEVFETF-----KKE 245 (309)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHH
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhhhh---cCCCchHHHHHHHHHHHHHHHHHH
Q psy6493 759 VQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEA---KNHHADSITQRCQQLQLKLDNLMA 817 (1321)
Q Consensus 759 ~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~~~---~~~~~~~i~~~~~~l~~~~~~l~~ 817 (1321)
++..-.+.+.+..+-.......+..+...-.++.. .......+..++..|..-...|..
T Consensus 246 mekm~Kk~kklEKE~~~~k~k~e~~n~~l~~m~eer~~~~~~~~~~~~k~~kLe~LcRaLQ~ 307 (309)
T PF09728_consen 246 MEKMSKKIKKLEKENQTWKSKWEKSNKALIEMAEERQKLEKELEKLKKKIEKLEKLCRALQA 307 (309)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 256
>PF08429 PLU-1: PLU-1-like protein; InterPro: IPR013637 This domain is found in the central region of lysine-specific demethylases, which are nuclear proteins that may have a role in DNA-binding and transcription, and are associated with malignant cancer phenotypes []. The domain is also found in various other Jumonji/ARID domain-containing proteins (see IPR013129 from INTERPRO, IPR001606 from INTERPRO). ; GO: 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process
Probab=25.88 E-value=9.8e+02 Score=26.87 Aligned_cols=30 Identities=13% Similarity=0.340 Sum_probs=18.9
Q ss_pred HHHHHHHhhhccCCCCCCHHHHHHHHHHHHH
Q psy6493 313 NWMSAREAFLNAEEVDSKTDNVEALIKKHED 343 (1321)
Q Consensus 313 ~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~ 343 (1321)
.|.......|...+ ..++..++.++..-+.
T Consensus 2 ~W~~k~~~~l~~~~-k~~L~~l~~Ll~e~e~ 31 (335)
T PF08429_consen 2 TWAEKVKEALEESP-KPSLKELRSLLSEGEK 31 (335)
T ss_pred hhHHHHHHHHhcCC-CCCHHHHHHHHHHHHh
Confidence 57888777776322 2366777777666554
No 257
>PRK11637 AmiB activator; Provisional
Probab=25.32 E-value=1.1e+03 Score=27.49 Aligned_cols=227 Identities=8% Similarity=0.040 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHhhHHh
Q psy6493 884 HEGIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNSWFEN 963 (1321)
Q Consensus 884 ~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~l~~~f~~~~~~~~~wl~~ 963 (1321)
...+..+.-.+--++..-.+....+..+++.+...-..+...+..-+..+......+.....-+......+..+..-|..
T Consensus 21 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~l~~qi~~~~~~i~~~~~~~~~~~~~l~~l~~qi~~~~~~i~~~~~~i~~ 100 (428)
T PRK11637 21 RPILYASVLSAGVLLCAFSAHASDNRDQLKSIQQDIAAKEKSVRQQQQQRASLLAQLKKQEEAISQASRKLRETQNTLNQ 100 (428)
T ss_pred hhHHHHHHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hhhhcCCCcCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcchhhcHHHHHHHHHHHHHHHHHH
Q psy6493 964 AEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKER 1043 (1321)
Q Consensus 964 ~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r 1043 (1321)
.+ ..+..+..+....+..+...+..+.......-.-.....-.--........+.....-+......+
T Consensus 101 ~~------------~ei~~l~~eI~~~q~~l~~~~~~l~~rlra~Y~~g~~~~l~vLl~a~~~~~~~r~~~~l~~i~~~d 168 (428)
T PRK11637 101 LN------------KQIDELNASIAKLEQQQAAQERLLAAQLDAAFRQGEHTGLQLILSGEESQRGERILAYFGYLNQAR 168 (428)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHhcCCChhHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHH
Q psy6493 1044 DIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEE 1122 (1321)
Q Consensus 1044 ~~~L~~~~~~~~~~~~~~~~f~~~~~~l~~wl~~~~~~~~~~~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~ 1122 (1321)
...++.-....................+..-+.+.............++-..+..+..++......+..+....+.+..
T Consensus 169 ~~~l~~l~~~~~~L~~~k~~le~~~~~l~~~~~e~~~~k~~L~~~k~e~~~~l~~L~~~~~~~~~~l~~l~~~~~~L~~ 247 (428)
T PRK11637 169 QETIAELKQTREELAAQKAELEEKQSQQKTLLYEQQAQQQKLEQARNERKKTLTGLESSLQKDQQQLSELRANESRLRD 247 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 258
>PF07106 TBPIP: Tat binding protein 1(TBP-1)-interacting protein (TBPIP); InterPro: IPR010776 This family consists of several eukaryotic TBP-1 interacting protein (TBPIP) sequences. TBP-1 has been demonstrated to interact with the human immunodeficiency virus type 1 (HIV-1) viral protein Tat, then modulate the essential replication process of HIV. In addition, TBP-1 has been shown to be a component of the 26S proteasome, a basic multiprotein complex that degrades ubiquitinated proteins in an ATP-dependent fashion. Human TBPIP interacts with human TBP-1 then modulates the inhibitory action of human TBP-1 on HIV-Tat-mediated transactivation [].
Probab=25.18 E-value=6.3e+02 Score=24.94 Aligned_cols=70 Identities=10% Similarity=0.254 Sum_probs=43.1
Q ss_pred ccccCCC-CCHHHHHHHHHhhHhHHHHHhhhHHHHHHHHHHHHHHHhcCCchHHhhHHHHHHHHHHHHHHHHHH
Q psy6493 3 AQVQDVG-EDLEQVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQLMSLGQTEAALKIQTQLQDLNQKWTSLQQL 75 (1321)
Q Consensus 3 ~~~~~~~-~d~~~~~~~~~~~~~l~~el~~~~~~v~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~l~~~ 75 (1321)
+.++.++ .+.+.+..+-.++..+..++......+..+...-..|... |... .+...+..|......+...
T Consensus 61 ~~Q~~~~~~s~eel~~ld~ei~~L~~el~~l~~~~k~l~~eL~~L~~~--~t~~-el~~~i~~l~~e~~~l~~k 131 (169)
T PF07106_consen 61 ANQDELEVPSPEELAELDAEIKELREELAELKKEVKSLEAELASLSSE--PTNE-ELREEIEELEEEIEELEEK 131 (169)
T ss_pred eCccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHH-HHHHHHHHHHHHHHHHHHH
Confidence 3445544 3566777777778888888888777777777666655544 3333 5666666665555444333
No 259
>KOG4347|consensus
Probab=24.63 E-value=53 Score=38.92 Aligned_cols=57 Identities=21% Similarity=0.288 Sum_probs=47.6
Q ss_pred HHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHH
Q psy6493 1175 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEY 1239 (1321)
Q Consensus 1175 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef 1239 (1321)
-...+|+.+|.+++|.|+..+|...|..+..+. ..+.+.-++..+|++++ ..+.++-
T Consensus 556 ~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~-------~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 556 FLERLFRLLDDSMTGLLTFKDLVSGLSILKAGD-------ALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHhcccCCcceeEHHHHHHHHHHHHhhh-------HHHHHHHHHhhccCCcc-ccccccc
Confidence 467789999999999999999999998876554 45667788999999988 7777776
No 260
>PF00804 Syntaxin: Syntaxin; InterPro: IPR006011 Syntaxins A and B are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane. Syntaxins are a family of receptors for intracellular transport vesicles. Each target membrane may be identified by a specific member of the syntaxin family []. Members of the syntaxin family [, ] have a size ranging from 30 Kd to 40 Kd; a C-terminal extremity which is highly hydrophobic and anchors the protein on the cytoplasmic surface of cellular membranes; a central, well conserved region, which seems to be in a coiled-coil conformation. ; GO: 0016020 membrane; PDB: 1S94_B 1EZ3_A 3C98_B 1BR0_A 1FIO_A 2XHE_B.
Probab=23.98 E-value=4.9e+02 Score=22.71 Aligned_cols=67 Identities=10% Similarity=0.273 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 549 NLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNE 616 (1321)
Q Consensus 549 ~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~ 616 (1321)
..+.....+...|......+..|...-...+..... ...+...++.+......+...+..+...|..
T Consensus 4 ~f~~~v~~i~~~i~~i~~~~~~l~~l~~~~l~~~~~-d~~~~~el~~l~~~i~~~~~~~~~~lk~l~~ 70 (103)
T PF00804_consen 4 EFFDEVQEIREDIDKIKEKLNELRKLHKKILSSPDQ-DSELKRELDELTDEIKQLFQKIKKRLKQLSK 70 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777888888888888887777666655431 1356666666666666666666555555554
No 261
>PF12252 SidE: Dot/Icm substrate protein; InterPro: IPR021014 This entry represents bacterial proteins that are typically between 397 and 1543 amino acids in length including SidE protein in the Dot/Icm pathway of Legionella pneumophila bacteria. There is little literature describing the family.
Probab=23.64 E-value=1.7e+03 Score=28.90 Aligned_cols=356 Identities=13% Similarity=0.173 Sum_probs=0.0
Q ss_pred cCCCCCHH---HHHHHHHhhHhHHHHHhhhHHHHHHHHHHHHHHHhcCCchHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 6 QDVGEDLE---QVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQLMSLGQTEAALKIQTQLQDLNQKWTSLQQLTAERATQ 82 (1321)
Q Consensus 6 ~~~~~d~~---~~~~~~~~~~~l~~el~~~~~~v~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~ 82 (1321)
..||++-+ .=..+..++....+++.+.|..|-. -+-..-.....+|+.|...+..|-..
T Consensus 1053 n~IPSdKEms~Is~eLReQIq~~KQ~LesLQRAV~T------------------PVvtd~eKvr~rYe~LI~~iTKrIt~ 1114 (1439)
T PF12252_consen 1053 NNIPSDKEMSKISSELREQIQSVKQDLESLQRAVVT------------------PVVTDAEKVRVRYETLITDITKRITD 1114 (1439)
T ss_pred hcCCchhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc------------------cccccHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHhHHH--HHHHHHhHHHHHHH------HHHHHhhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Q psy6493 83 LGSAHE--VQRFHRDVDETKDW------IQEKDEALNNNDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDETANRLM 154 (1321)
Q Consensus 83 L~~~l~--~~~f~~~~~~~~~w------l~~~e~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~l~~~~~~L~ 154 (1321)
|+.+-. +..+...+..+.+- |+.-..++....-..|-..++.+-++++.+...+ +-..+..+......|.
T Consensus 1115 LEk~k~~~l~~ikK~ia~lnnlqqElklLRnEK~Rmh~~~dkVDFSDIEkLE~qLq~~~~kL--~dAyl~eitKqIsaLe 1192 (1439)
T PF12252_consen 1115 LEKAKLDNLDSIKKAIANLNNLQQELKLLRNEKIRMHSGTDKVDFSDIEKLEKQLQVIHTKL--YDAYLVEITKQISALE 1192 (1439)
T ss_pred HhccccccHHHHHHHHHHHHHHHHHHHHHHhHHHhhccCCCcccHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHH
Q ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHH
Q psy6493 155 QTHPETAEQTYAKQKEINEEWTQLTAKANTRKEKLLDSYDLQRFLSDYRDLMSWINSMMGLVSSDELANDVTGAEALLER 234 (1321)
Q Consensus 155 ~~~~~~~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~ 234 (1321)
...|..-..|..+.+.+..+-..+...-++|...=....+-..+ ++++.+..-|..+-..+ +..++..
T Consensus 1193 ~e~PKnltdvK~missf~d~laeiE~LrnErIKkHGaSkePLDl-SDlDkLk~~LQ~iNQ~L-----------V~~LIn~ 1260 (1439)
T PF12252_consen 1193 KEKPKNLTDVKSMISSFNDRLAEIEFLRNERIKKHGASKEPLDL-SDLDKLKGQLQKINQNL-----------VKALINT 1260 (1439)
T ss_pred hhCCCchhhHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCccch-hhHHHHHHHHHHHHHHH-----------HHHHHHH
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy6493 235 HQEHRTEIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEAREDLEKAWIARRMQLDQCLELQLFYRDCEQAENW 314 (1321)
Q Consensus 235 ~~~l~~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~w 314 (1321)
.+.....|+... |...-..+..=
T Consensus 1261 iR~slnqme~~t---------------------------------------------------------f~~q~~eiq~n 1283 (1439)
T PF12252_consen 1261 IRVSLNQMEVKT---------------------------------------------------------FEEQEKEIQQN 1283 (1439)
T ss_pred HHHHHHHhhhhh---------------------------------------------------------hhhhhHHHHHH
Q ss_pred HHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHH
Q psy6493 315 MSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEAL 394 (1321)
Q Consensus 315 l~~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~ 394 (1321)
+.-.+......+-.......+..+.+++++.-+-+.-.+.+-.|.=..+.| |..-.+--+.....+....
T Consensus 1284 ~~ll~~L~~tlD~S~~a~Kqk~di~kl~~~lv~kQKAYP~M~QlQ~kseal----------I~qLRelC~~h~~~l~k~~ 1353 (1439)
T PF12252_consen 1284 LQLLDKLEKTLDDSDTAQKQKEDIVKLNDFLVEKQKAYPAMVQLQFKSEAL----------IIQLRELCEAHQDNLAKTR 1353 (1439)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhhchHHHHHhhhhHHH----------HHHHHHHHHHhhHHHHHHH
Q ss_pred HHHHHHHHhhH-HHHHHHHhHHHHHHHHHHHHHhhhhcccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q psy6493 395 IEKRSRLGESQ-TLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLA 465 (1321)
Q Consensus 395 ~~r~~~L~~~~-~~~~f~~~~~~l~~Wl~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~ 465 (1321)
..|...|.... . .-+.....|+-......-.........+..+-+.+..|..++..-+..+..++.
T Consensus 1354 ~~r~~el~~~~~e-----~Gi~~~~~~~~~~~t~~iglt~der~~i~~K~~~l~~fk~~Lnndk~di~qLi~ 1420 (1439)
T PF12252_consen 1354 KTRLQELTKQDRE-----GGITGMVGNMFQGLTDYIGLTTDERLEIAMKQQSLARFKTDLNNDKYDIDQLIS 1420 (1439)
T ss_pred HHHHHHHhccccc-----cchhhhhhHHHHhhhhhhccchhHHHHHHHHHHHHHHHHHhhccCcccHHHHHH
No 262
>cd07665 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. SNX1 is a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), which ensures effcient cargo sorting by facilitating proper membrane localization
Probab=23.63 E-value=8.8e+02 Score=25.55 Aligned_cols=116 Identities=10% Similarity=0.137 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHHHhHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHHHHHH
Q psy6493 57 KIQTQLQDLNQKWTSLQQLTAERATQLGSAHE--VQRFHRDVDETKDWIQEKDEALNNNDLGKDLRSVQALQRKHEGLER 134 (1321)
Q Consensus 57 ~i~~~l~~l~~~w~~l~~~~~~r~~~L~~~l~--~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~l~~ 134 (1321)
.+...+..|.+.-.++...........-..+. +..|.+-+..+..-+.+..+. ...+.....
T Consensus 77 ~Ls~als~laev~~~i~~~~~~qa~qd~~~f~e~l~eYiRli~SVK~~f~~R~k~----------------~~~~~~~~~ 140 (234)
T cd07665 77 ALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLADYIRLLSAVRGAFDQRMKT----------------WQRWQDAQA 140 (234)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHH
Confidence 45566666666655555555444443333332 555555555555444433322 244455566
Q ss_pred HHHHhHhHHHHHHHHH--HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 135 DLAALGDKIRQLDETA--NRLMQTHPETAEQTYAKQKEINEEWTQLTAKANTRKEKL 189 (1321)
Q Consensus 135 ~l~~~~~~v~~l~~~~--~~L~~~~~~~~~~l~~~~~~l~~~w~~l~~~~~~r~~~L 189 (1321)
++...+..+..+...+ +++.+. .......+.++......|+.+...+..-..+.
T Consensus 141 ~l~kKr~~~~Kl~~~~~~dK~~~a-~~Ev~e~e~k~~~a~~~fe~is~~ik~El~rF 196 (234)
T cd07665 141 MLQKKREAEARLLWANKPDKLQQA-KDEIAEWESRVTQYERDFERISATVRKEVIRF 196 (234)
T ss_pred HHHHHHHHHHHHHhcCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666665553211 111111 01233455666666777777776666544443
No 263
>PF03962 Mnd1: Mnd1 family; InterPro: IPR005647 This family of proteins includes meiotic nuclear division protein 1 (MND1) from Saccharomyces cerevisiae (Baker's yeast). The mnd1 protein forms a complex with hop2 to promote homologous chromosome pairing and meiotic double-strand break repair [].
Probab=23.40 E-value=7.8e+02 Score=24.88 Aligned_cols=96 Identities=18% Similarity=0.314 Sum_probs=67.7
Q ss_pred CHHHHHHHHHhhHhHHHHHhhhHHHHHHHHHHHHHHHhcCC-chHHhhHHHHHHHHHHHHHHHHHHHH-------HHHHH
Q psy6493 11 DLEQVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQLMSLGQ-TEAALKIQTQLQDLNQKWTSLQQLTA-------ERATQ 82 (1321)
Q Consensus 11 d~~~~~~~~~~~~~l~~el~~~~~~v~~l~~~~~~l~~~~~-~~~~~~i~~~l~~l~~~w~~l~~~~~-------~r~~~ 82 (1321)
+.........++..+..++......+..+............ ...+..+-..+..|...-..|...+. ++...
T Consensus 60 ps~~~~~~~~~~~~l~~~~~~~~~~i~~l~~~i~~~~~~r~~~~eR~~~l~~l~~l~~~~~~l~~el~~~~~~Dp~~i~~ 139 (188)
T PF03962_consen 60 PSQAKQKRQNKLEKLQKEIEELEKKIEELEEKIEEAKKGREESEEREELLEELEELKKELKELKKELEKYSENDPEKIEK 139 (188)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 45677888899999999999999999999888887765443 33444666666666666666665555 33444
Q ss_pred HHh----HHH-HHHHHHhHHHHHHHHHHH
Q psy6493 83 LGS----AHE-VQRFHRDVDETKDWIQEK 106 (1321)
Q Consensus 83 L~~----~l~-~~~f~~~~~~~~~wl~~~ 106 (1321)
+.. +.. ..++.+.+..+..|+...
T Consensus 140 ~~~~~~~~~~~anrwTDNI~~l~~~~~~k 168 (188)
T PF03962_consen 140 LKEEIKIAKEAANRWTDNIFSLKSYLKKK 168 (188)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 432 222 677888888888888864
No 264
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=23.22 E-value=1.2e+02 Score=27.01 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=42.0
Q ss_pred cCCCChHHHHHHHHHcC--CCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcccCCHHHHHHHHHHHc
Q psy6493 1188 SGKLNQTEFKSCLRALG--YDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETENVQSSEEIENAFHAIA 1265 (1321)
Q Consensus 1188 ~g~i~~~e~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~F~~~D 1265 (1321)
||.++..|...+-..+. +++ +......++..+........++.+|...+.... ++.....-+...|...
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~l~~L~~vA- 83 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGL-------DAEEAAELLAEAEALEEEAPDLYEFTSLIKEHF-DYEERLELVEALWEVA- 83 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCc-------CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhC-CHHHHHHHHHHHHHHH-
Confidence 57777777655543221 122 334555666655554455678888887765432 1111222344445544
Q ss_pred cCCCCCcCHHHH
Q psy6493 1266 ASDRPYVTKEEL 1277 (1321)
Q Consensus 1266 ~~~~G~I~~~el 1277 (1321)
..||.++..|-
T Consensus 84 -~ADG~~~~~E~ 94 (104)
T cd07313 84 -YADGELDEYEE 94 (104)
T ss_pred -HhcCCCCHHHH
Confidence 34577776663
No 265
>TIGR03545 conserved hypothetical protein TIGR03545. This model represents a relatively rare but broadly distributed uncharacterized protein family, distributed in 1-2 percent of bacterial genomes, all of which have outer membranes. In many of these genomes, it is part of a two-gene pair.
Probab=23.16 E-value=1.4e+03 Score=27.79 Aligned_cols=105 Identities=10% Similarity=0.162 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhh
Q psy6493 697 QRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVH 776 (1321)
Q Consensus 697 ~~l~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~el~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 776 (1321)
...+++...|......+..+...|...-....|...++++.. . --.++..+.+..++++.+..++..-
T Consensus 164 ~~~~~~~~~~k~~~~~w~~~~~~Lp~~~~~~~yk~~v~~i~~-----------~-~ik~p~~i~~~~~e~d~lk~e~~~~ 231 (555)
T TIGR03545 164 ETAEEIEKSLKAMQQKWKKRKKDLPNKQDLEEYKKRLEAIKK-----------K-DIKNPLELQKIKEEFDKLKKEGKAD 231 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHh-----------c-cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666777777777543355566666666554 1 1245777777777888887877655
Q ss_pred HHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 777 RDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLM 827 (1321)
Q Consensus 777 ~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~~~~l~~~~~~r~~~Le 827 (1321)
...+..+.+ .+......+...+..|...-..=..+|.
T Consensus 232 ~~~i~~~~~--------------~l~~~~~~~~~~~~~lk~ap~~D~~~L~ 268 (555)
T TIGR03545 232 KQKIKSAKN--------------DLQNDKKQLKADLAELKKAPQNDLKRLE 268 (555)
T ss_pred HHHHHHHHH--------------HHHHhHHHHHHHHHHHHhccHhHHHHHH
Confidence 555544333 2333344444444555555444444444
No 266
>PF13949 ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HIV ; PDB: 2XS1_A 2XS8_A 2R03_A 2R02_A 2OEX_B 2OEV_A 2OJQ_A 2R05_A.
Probab=23.14 E-value=1e+03 Score=26.09 Aligned_cols=72 Identities=15% Similarity=0.243 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 546 SVQNLIKKHQLVEAD----IQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANT 619 (1321)
Q Consensus 546 ~~~~~l~~~~~l~~e----i~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~ 619 (1321)
-....+++|..+... +......+..|...-..+......+ ........+-..+..-.....+-...+.....
T Consensus 194 lf~~eL~k~~~~~~~i~~~~~~Q~~ll~~i~~~~~~~~~~~~~~--~~~~~r~~~~~~l~~a~~~y~el~~~l~eG~~ 269 (296)
T PF13949_consen 194 LFEEELKKFDPLQNRIQQNLSKQEELLQEIQEANEEFAQSRKSD--QEQKERESALQRLEAAYDAYKELSSNLEEGLK 269 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 344456666544444 4444556666666666665443211 12233333334444444444444444444444
No 267
>PF07304 SRA1: Steroid receptor RNA activator (SRA1); InterPro: IPR009917 This entry consists of several hypothetical mammalian steroid receptor RNA activator proteins. The SRA-RNAs encode stable proteins that are widely expressed and upregulated in breast cancer cell lines. SRA-RNA is a steroid receptor co-activator which acts as a functional RNA. This domain is also found at the C terminus of Sec31, a component of the coat protein complex II (COPII, which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). COPII has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. ; PDB: 2YRU_A.
Probab=23.00 E-value=4.5e+02 Score=25.68 Aligned_cols=54 Identities=28% Similarity=0.431 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHhHHHHHHh
Q psy6493 481 EAVQARLASIADQWEF--LTQKTTEKSLKLKEANKQRTYIAA-----------VKDLDFWLGEVESL 534 (1321)
Q Consensus 481 ~~i~~~l~~l~~~w~~--l~~~~~~r~~~L~~~~~~~~~~~~-----------~~~l~~WL~~~e~~ 534 (1321)
+++.++|+-|.+.|+. |..-+..+...|-.+++...|..+ .+++..|+..+...
T Consensus 68 ~D~~KRL~iLfd~ln~g~Ls~~v~~~L~~L~~aL~~~d~~~A~~Ih~~L~t~h~~E~~~WmvGVKRL 134 (157)
T PF07304_consen 68 DDIEKRLNILFDHLNNGKLSKPVVDKLHQLAQALQARDYDAADEIHVDLMTDHVDECGNWMVGVKRL 134 (157)
T ss_dssp HHHHHHHHHHHHHHHHT-S-HHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHSSHHHHTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccHHHhhhHHHHHHHH
Confidence 5789999999999985 777777787888777766666544 34555566555443
No 268
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]
Probab=22.95 E-value=1.2e+03 Score=26.89 Aligned_cols=198 Identities=12% Similarity=0.030 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHH---hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHH
Q psy6493 127 RKHEGLERDLAALGDKIRQLDETANRLMQ---THPETAEQTYAKQKEINEEWTQLTAKANTRKEKLLDSYD-LQRFLSDY 202 (1321)
Q Consensus 127 ~~~~~l~~~l~~~~~~v~~l~~~~~~L~~---~~~~~~~~l~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~-~~~f~~~~ 202 (1321)
++++....+|......+....+....|.. ....+...+...+......-..+...+.+-...|..... ...=...+
T Consensus 38 ~~l~q~q~ei~~~~~~i~~~~~~~~kL~~~lk~~e~~i~~~~~ql~~s~~~l~~~~~~I~~~~~~l~~l~~q~r~qr~~L 117 (420)
T COG4942 38 KQLKQIQKEIAALEKKIREQQDQRAKLEKQLKSLETEIASLEAQLIETADDLKKLRKQIADLNARLNALEVQEREQRRRL 117 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHH--hhhccCCcccCCHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHH
Q psy6493 203 RDLMSWINSM--MGLVSSDELANDVTGAEALLERHQEHRTEIDARTGTFQAFDLFGQQLLQSGHYASVEIQDKLGNLAEA 280 (1321)
Q Consensus 203 ~~l~~wl~~~--e~~l~~~~~~~~~~~~~~~l~~~~~l~~el~~~~~~~~~l~~~g~~l~~~~~~~~~~i~~~l~~l~~~ 280 (1321)
..+..|+..+ ..-+.-...|.++.......-.+..+..++...-..+......-..+-.........+...+.....+
T Consensus 118 a~~L~A~~r~g~~p~~~ll~~~eda~~~~R~ai~~~~l~~~~~~~i~~l~~~~~~l~~~~~~iaaeq~~l~~~~~eq~~q 197 (420)
T COG4942 118 AEQLAALQRSGRNPPPALLVSPEDAQRSVRLAIYYGALNPARAERIDALKATLKQLAAVRAEIAAEQAELTTLLSEQRAQ 197 (420)
T ss_pred HHHHHHHHhccCCCCchhhcChhhhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHhhhcc
Q psy6493 281 REDLEKAWIARRMQLDQCLEL-QLFYRDCEQAENWMSAREAFLNA 324 (1321)
Q Consensus 281 ~~~l~~~~~~r~~~L~~~~~~-~~f~~~~~~l~~wl~~~e~~l~~ 324 (1321)
-..+.....++...+.+.-.. ..-...+.++..-=......+.+
T Consensus 198 ~~kl~~~~~E~kk~~~~l~~~l~~~q~~l~eL~~~~~~L~~~Ias 242 (420)
T COG4942 198 QAKLAQLLEERKKTLAQLNSELSADQKKLEELRANESRLKNEIAS 242 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
No 269
>PRK10869 recombination and repair protein; Provisional
Probab=22.88 E-value=1.4e+03 Score=27.79 Aligned_cols=39 Identities=8% Similarity=-0.040 Sum_probs=19.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHhh
Q psy6493 753 GDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLI 791 (1321)
Q Consensus 753 ~~~~~~~~~~l~~~~~~~~~l~~~~~~v~~l~~~~~~L~ 791 (1321)
..||..++....++..+..=-..+.+.++.+......+.
T Consensus 292 ~~dp~~l~~ie~Rl~~l~~L~rKyg~~~~~~~~~~~~l~ 330 (553)
T PRK10869 292 DLDPNRLAELEQRLSKQISLARKHHVSPEELPQHHQQLL 330 (553)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 345555555555554444444444556666665555444
No 270
>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair]
Probab=22.78 E-value=1.4e+03 Score=27.61 Aligned_cols=258 Identities=10% Similarity=0.155 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHH
Q psy6493 335 EALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDK-RKQVLDRWRLLKEALIEKRSRLGESQ-TLQQFSR 412 (1321)
Q Consensus 335 ~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~-~~~l~~r~~~l~~~~~~r~~~L~~~~-~~~~f~~ 412 (1321)
...++.+-...-+|........-+......-+-..-.+....... +...-..|..+...+..++..-.... ...-+.-
T Consensus 113 ~~~L~~l~~~Li~IHGQh~~q~Ll~~~~~r~lLD~f~~~~~~~~~~~~~~y~~w~~~~~~l~~~~~~~~e~~~~~d~L~f 192 (557)
T COG0497 113 LAQLKELGQLLIDIHGQHEHQSLLKPELQRQLLDAFAGLEELAQEAYQEAYQAWKQARRELEDLQEKERERAQRADLLQF 192 (557)
T ss_pred HHHHHHHHHhhheeeccchHHHhcChHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hHHHHHHHHHHHHHhhhhcccCCchhHHHHHHHHHHHHHHHHhcHHHHHHHHHHhHHhHhccCCCCCHHHHHHHHHHH--
Q psy6493 413 DADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASI-- 490 (1321)
Q Consensus 413 ~~~~l~~Wl~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~l-- 490 (1321)
.+.++.. .++.++....|....+++....+-.......+..+.. ...+++....|...+..|
T Consensus 193 q~~Ele~---------~~l~~gE~e~L~~e~~rLsn~ekl~~~~~~a~~~L~g-------e~~~~~~~~~l~~a~~~l~~ 256 (557)
T COG0497 193 QLEELEE---------LNLQPGEDEELEEERKRLSNSEKLAEAIQNALELLSG-------EDDTVSALSLLGRALEALED 256 (557)
T ss_pred HHHHHHh---------cCCCCchHHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-------CCCchhHHHHHHHHHHHHHH
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 491 ----ADQWEFLTQKTTEKSLKLKEANK-QRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHD 565 (1321)
Q Consensus 491 ----~~~w~~l~~~~~~r~~~L~~~~~-~~~~~~~~~~l~~WL~~~e~~L~~~~~~~d~~~~~~~l~~~~~l~~ei~~~~ 565 (1321)
..++..+...+.+-...|+++.. ...|.+.++- ||..+......+..+..=...+.
T Consensus 257 ~~~~d~~l~~~~~~l~ea~~~l~ea~~el~~~~~~le~-------------------Dp~~L~~ve~Rl~~L~~l~RKY~ 317 (557)
T COG0497 257 LSEYDGKLSELAELLEEALYELEEASEELRAYLDELEF-------------------DPNRLEEVEERLFALKSLARKYG 317 (557)
T ss_pred hhccChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------------CHHHHHHHHHHHHHHHHHHHHhC
Q ss_pred HHHHHHHHHHHHH------HhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhH
Q psy6493 566 DRIKDMNGQADSL------IDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANT--LHQFFRDI 627 (1321)
Q Consensus 566 ~~v~~l~~~~~~L------~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~--~~~f~~~~ 627 (1321)
+.++.+..-..++ +..+......+...+..+...|......+...+...-..+. +......+
T Consensus 318 ~~~~~l~~~~~~~~~el~~L~~~~~~~~~Le~~~~~l~~~~~~~A~~Ls~~R~~~A~~L~~~v~~eL~~L 387 (557)
T COG0497 318 VTIEDLLEYLDKIKEELAQLDNSEESLEALEKEVKKLKAELLEAAEALSAIRKKAAKELEKEVTAELKAL 387 (557)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 271
>PRK11546 zraP zinc resistance protein; Provisional
Probab=22.05 E-value=7e+02 Score=23.82 Aligned_cols=56 Identities=20% Similarity=0.226 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHH
Q psy6493 330 KTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLD 385 (1321)
Q Consensus 330 ~~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~ 385 (1321)
+++.-.....-+++|..+....+..+-.-...-+.|+....++...|.....+|.+
T Consensus 45 T~EQQa~~q~I~~~f~~~t~~LRqqL~aKr~ELnALl~~~~pD~~kI~aL~kEI~~ 100 (143)
T PRK11546 45 TTEQQAAWQKIHNDFYAQTSALRQQLVSKRYEYNALLTANPPDSSKINAVAKEMEN 100 (143)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 67777777888889999999999999888888889988777777666654444443
No 272
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=22.04 E-value=1.7e+03 Score=28.24 Aligned_cols=30 Identities=13% Similarity=0.254 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 548 QNLIKKHQLVEADIQAHDDRIKDMNGQADS 577 (1321)
Q Consensus 548 ~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~ 577 (1321)
+.+.++++.+...+...+..++.+....+.
T Consensus 635 r~~~~EL~~~~~~l~~l~~si~~lk~k~~~ 664 (717)
T PF10168_consen 635 REFKKELERMKDQLQDLKASIEQLKKKLDY 664 (717)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777777777777777777666554
No 273
>PF14735 HAUS4: HAUS augmin-like complex subunit 4
Probab=21.51 E-value=9.7e+02 Score=25.29 Aligned_cols=172 Identities=17% Similarity=0.139 Sum_probs=76.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHHHHhcCCCCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 974 CNSIEEIRALREAHAQFQASLSSAQADFE-ALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEAT 1052 (1321)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~L~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~ 1052 (1321)
|-+...+-.....-..+..--....+.|+ .|...+..|...+.++.......+ ....-..|-..+...++.++.+-.
T Consensus 18 Gl~~~~L~~~~~~~~~~~~~q~~L~~eiE~~Lk~KC~~Lls~~~p~~~~~s~~l--~~ak~~~L~~~l~~ek~~~~~~k~ 95 (238)
T PF14735_consen 18 GLTPADLLQLMPDKKDVQRMQQRLPREIEERLKKKCFSLLSYHQPDSESSSEGL--KAAKSWQLPELLREEKQRLEKEKA 95 (238)
T ss_pred CCCHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccchh--hHhHHHhHHHHHHHHHHHHHHHHH
Confidence 44444443333333333333333445553 677788888888776643333222 122223334444444444443332
Q ss_pred hhhhhH-HHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHHhhcccccCC
Q psy6493 1053 RQDEND-ALRKEFAKHANAFHQWLTETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYT 1131 (1321)
Q Consensus 1053 ~~~~~~-~~~~~f~~~~~~l~~wl~~~~~~~~~~~~~l~~ql~~~~~l~~ei~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1131 (1321)
.+.++- .+.++|......+..=+.-+..-+....-..+..++..+.-.-+..... ....=.+.+..+....||
T Consensus 96 ~~~e~~~~l~~q~~~y~~vL~~cl~~L~~li~~~rl~~q~~~d~~~~~~L~~kcea------m~lKLr~~~~~iL~~TYT 169 (238)
T PF14735_consen 96 QLRELLVLLERQFATYYQVLLQCLQLLQKLIEKHRLGTQAELDKIKAEYLEAKCEA------MILKLRVLELEILSDTYT 169 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHhHHHHHHHHHHHHH------HHHHHHHHHHHHHHccCC
Confidence 222222 2234555555555554444433332221222222222221111111100 011111233455577899
Q ss_pred chhHhHHHHHHHHHHHHHHHHH
Q psy6493 1132 EHSTVGLAQQWDQLDQLGMRMQ 1153 (1321)
Q Consensus 1132 ~~~~~~l~~~~~~l~~~~~~~~ 1153 (1321)
+.+...++-.++.+........
T Consensus 170 pe~v~Al~~Ir~~L~~~~~~~e 191 (238)
T PF14735_consen 170 PETVPALRKIRDHLEEAIEELE 191 (238)
T ss_pred HHhHHHHHHHHHHHHHHHHHHH
Confidence 8888888877777666555543
No 274
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=21.03 E-value=1e+02 Score=18.35 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=12.4
Q ss_pred cccCcCCCChHHHHHH
Q psy6493 1184 DKDKSGKLNQTEFKSC 1199 (1321)
Q Consensus 1184 D~~~~g~i~~~e~~~~ 1199 (1321)
|.|++|.|+.-++..+
T Consensus 1 DvN~DG~vna~D~~~l 16 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALL 16 (21)
T ss_dssp -TTSSSSSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHH
Confidence 6789999999888654
No 275
>KOG1264|consensus
Probab=21.00 E-value=1.4e+02 Score=36.26 Aligned_cols=144 Identities=13% Similarity=0.163 Sum_probs=82.0
Q ss_pred CCCHHHHHHH-HHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhcCCCCCccccHHHHHHHHhh
Q psy6493 1167 GVSEDALKEF-SMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1245 (1321)
Q Consensus 1167 ~~~~~~~~~~-~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 1245 (1321)
..++.++..| +..|..+|...-..|+..+++.+|....+..+ +...+.+-|.. |.-..+.++|++|..+...
T Consensus 136 a~~p~qI~~wlrk~~ysvd~~~~~~isard~k~~l~qvn~k~~------~~kfl~e~~te-d~~~k~dlsf~~f~~ly~~ 208 (1267)
T KOG1264|consen 136 APTPLQIERWLRKQIYSVDQTRENSISARDLKTILPQVNFKVS------SAKFLKEKFTE-DGARKDDLSFEQFHLLYKK 208 (1267)
T ss_pred CCChHHHHHHHHhhheeccchhhhheeHHhhhcccccceEEec------hHHHHHHHHhH-hhhccccccHHHHHHHHHH
Confidence 3456666544 55677788777778999999999987776652 23333233322 2335678999999988766
Q ss_pred hhhcccC-CHHHHHHHHHH--HccCCCCCcCHHHHHhhCCHhhH----------HHHHHcCCCCCCCCCCCCCCCCcchH
Q psy6493 1246 KETENVQ-SSEEIENAFHA--IAASDRPYVTKEELYANLTKEMA----------DYCVERMKPYVDPKTERGIPGALDYI 1312 (1321)
Q Consensus 1246 ~~~~~~~-~~~~~~~~F~~--~D~~~~G~I~~~el~~~l~~~~~----------~~~~~~~~~~~d~~~~d~~~g~i~~~ 1312 (1321)
++....- ........|-. -+...-..++..+|.++|-.++. .+++..++. |.- ++-....+.+.
T Consensus 209 lmfs~~~a~l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~--D~~-re~~EPyl~v~ 285 (1267)
T KOG1264|consen 209 LMFSQQKAILLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFID--DTM-RETAEPYLFVD 285 (1267)
T ss_pred HhhccchhhhhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHh--hhh-hhccCcceeHH
Confidence 5421110 00111111211 11122256889999998854332 222222221 122 33233689999
Q ss_pred HHHHhhhc
Q psy6493 1313 EFTRTLFQ 1320 (1321)
Q Consensus 1313 eF~~~~~~ 1320 (1321)
||+.++++
T Consensus 286 EFv~fLFS 293 (1267)
T KOG1264|consen 286 EFVTFLFS 293 (1267)
T ss_pred HHHHHHhh
Confidence 99999985
No 276
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=20.99 E-value=2.2e+02 Score=24.85 Aligned_cols=61 Identities=20% Similarity=0.341 Sum_probs=39.4
Q ss_pred HHHHHHhhhhccccCcCCCChHHHHHHHHHcCCCCCcccCCCCchHHHHHHHhc----CCCCCccccHHHHHHHHhhh
Q psy6493 1173 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLV----DPNRDGHVSLQEYMAFMISK 1246 (1321)
Q Consensus 1173 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~~g~i~~~ef~~~~~~~ 1246 (1321)
-..+..-|..+-. +|.|+...|..|+ |..- +.+...++|..+ ... .+.|+.+|+..++..+
T Consensus 29 W~~VE~RFd~La~--dG~L~rs~Fg~CI---GM~d-------SkeFA~eLFdALaRrr~i~-~~~I~k~eL~efW~qi 93 (100)
T PF08414_consen 29 WKEVEKRFDKLAK--DGLLPRSDFGECI---GMKD-------SKEFAGELFDALARRRGIK-GDSITKDELKEFWEQI 93 (100)
T ss_dssp HHHHHHHHHHH-B--TTBEEGGGHHHHH---T--S--------HHHHHHHHHHHHHHTT---SSEE-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhCc--CCcccHHHHHHhc---CCcc-------cHHHHHHHHHHHHHhcCCc-cCCcCHHHHHHHHHHh
Confidence 4556677877766 7999999999886 4433 556666666554 222 4679999999988654
No 277
>PLN02230 phosphoinositide phospholipase C 4
Probab=20.97 E-value=1.3e+02 Score=36.46 Aligned_cols=69 Identities=16% Similarity=0.205 Sum_probs=39.9
Q ss_pred CchHHHHHHHhcCCCCCccccHHHHHHHHhhhhhcc-cCCHHHHHHHHHHHc-------cCCCCCcCHHHHHhhCCHh
Q psy6493 1215 PDPEFEAILDLVDPNRDGHVSLQEYMAFMISKETEN-VQSSEEIENAFHAIA-------ASDRPYVTKEELYANLTKE 1284 (1321)
Q Consensus 1215 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~-~~~~~~~~~~F~~~D-------~~~~G~I~~~el~~~l~~~ 1284 (1321)
...++..+|..+..++ +.++.++|..|+...+... ..+.+.+..+|..+- .-+.+.++.+.|..+|...
T Consensus 27 p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s~ 103 (598)
T PLN02230 27 PVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFST 103 (598)
T ss_pred CcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcCc
Confidence 5677888888875433 6788888888886654211 224455555554331 1123446666666655443
No 278
>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.69 E-value=1.1e+03 Score=25.38 Aligned_cols=68 Identities=16% Similarity=0.335 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 548 QNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANT 619 (1321)
Q Consensus 548 ~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~L~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~r~~~Le~~~~ 619 (1321)
.......+.++.+|+.....|..+....+.+-. .-+.+...+..++.....+...+.+|...|.....
T Consensus 41 ~~~~~~~~~~q~ei~~L~~qi~~~~~k~~~~~~----~i~~~~~eik~l~~eI~~~~~~I~~r~~~l~~raR 108 (265)
T COG3883 41 SELQKEKKNIQNEIESLDNQIEEIQSKIDELQK----EIDQSKAEIKKLQKEIAELKENIVERQELLKKRAR 108 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556666666666666666665555422 23456666777777777777777777777776655
No 279
>PF15450 DUF4631: Domain of unknown function (DUF4631)
Probab=20.29 E-value=1.5e+03 Score=26.86 Aligned_cols=29 Identities=17% Similarity=0.126 Sum_probs=19.4
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q psy6493 270 IQDKL-GNLAEAREDLEKAWIARRMQLDQC 298 (1321)
Q Consensus 270 i~~~l-~~l~~~~~~l~~~~~~r~~~L~~~ 298 (1321)
....+ .+++.+|..|.....++...|...
T Consensus 219 ~E~~lreElE~rW~~lq~l~Ee~l~al~gq 248 (531)
T PF15450_consen 219 TERSLREELESRWQKLQELTEERLRALQGQ 248 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44555 677778888877777776665543
Done!