BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6494
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RAR0|EI2BA_PONAB Translation initiation factor eIF-2B subunit alpha OS=Pongo abelii
GN=EIF2B1 PE=2 SV=2
Length = 305
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 74/91 (81%), Gaps = 4/91 (4%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILK----KENLSKYHPLVD 56
MAVCAK KPFYV+AESFKFVRL+PLNQ+D+P++FK+ + LK ++L + HP VD
Sbjct: 215 MAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKYKADTLKVAQTGQDLKEEHPWVD 274
Query: 57 YTPPQYITLLFTDLGILTPSAVSDELIKLYL 87
YT P ITLLFTDLG+LTPSAVSDELIKLYL
Sbjct: 275 YTAPSLITLLFTDLGVLTPSAVSDELIKLYL 305
>sp|Q14232|EI2BA_HUMAN Translation initiation factor eIF-2B subunit alpha OS=Homo sapiens
GN=EIF2B1 PE=1 SV=1
Length = 305
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 74/91 (81%), Gaps = 4/91 (4%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILK----KENLSKYHPLVD 56
MAVCAK KPFYV+AESFKFVRL+PLNQ+D+P++FK+ + LK ++L + HP VD
Sbjct: 215 MAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKYKADTLKVAQTGQDLKEEHPWVD 274
Query: 57 YTPPQYITLLFTDLGILTPSAVSDELIKLYL 87
YT P ITLLFTDLG+LTPSAVSDELIKLYL
Sbjct: 275 YTAPSLITLLFTDLGVLTPSAVSDELIKLYL 305
>sp|Q64270|EI2BA_RAT Translation initiation factor eIF-2B subunit alpha OS=Rattus
norvegicus GN=Eif2b1 PE=2 SV=1
Length = 305
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 74/91 (81%), Gaps = 4/91 (4%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILKK----ENLSKYHPLVD 56
MAVCAK KPFYV+AESFKFVRL+PLNQ+D+P++FK+ + LK ++L + HP VD
Sbjct: 215 MAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKYKADTLKSVQAGQDLKEEHPWVD 274
Query: 57 YTPPQYITLLFTDLGILTPSAVSDELIKLYL 87
YT P ITLLFTDLG+LTPSAVSDELIKLYL
Sbjct: 275 YTSPSLITLLFTDLGVLTPSAVSDELIKLYL 305
>sp|Q0IIF2|EI2BA_BOVIN Translation initiation factor eIF-2B subunit alpha OS=Bos taurus
GN=EIF2B1 PE=2 SV=1
Length = 305
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 74/91 (81%), Gaps = 4/91 (4%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILKK----ENLSKYHPLVD 56
MAVCAK KPFYV+AESFKFVRL+PLNQ+D+P++FK+ + LK ++L + HP VD
Sbjct: 215 MAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKYKADTLKSVQTGQDLREEHPWVD 274
Query: 57 YTPPQYITLLFTDLGILTPSAVSDELIKLYL 87
YT P ITLLFTDLG+LTPSAVSDELIKLYL
Sbjct: 275 YTSPSLITLLFTDLGVLTPSAVSDELIKLYL 305
>sp|Q99LC8|EI2BA_MOUSE Translation initiation factor eIF-2B subunit alpha OS=Mus musculus
GN=Eif2b1 PE=2 SV=1
Length = 305
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 4/91 (4%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILKK----ENLSKYHPLVD 56
MAVCAK KPFYV+AESFKFVRL+PLNQ D+P++FK+ + LK ++L + HP VD
Sbjct: 215 MAVCAKAQNKPFYVVAESFKFVRLFPLNQEDVPDKFKYKADTLKSVQTGQDLKEEHPWVD 274
Query: 57 YTPPQYITLLFTDLGILTPSAVSDELIKLYL 87
YT P ITLLFTDLG+LTPSAVSDELIKLYL
Sbjct: 275 YTSPSLITLLFTDLGVLTPSAVSDELIKLYL 305
>sp|Q4R4V8|EI2BA_MACFA Translation initiation factor eIF-2B subunit alpha OS=Macaca
fascicularis GN=EIF2B1 PE=2 SV=1
Length = 305
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 73/91 (80%), Gaps = 4/91 (4%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILK----KENLSKYHPLVD 56
MAVCAK KPFY +AESFKFVRL+PLNQ+D+P++FK+ + LK ++L + HP VD
Sbjct: 215 MAVCAKAQNKPFYAVAESFKFVRLFPLNQQDVPDKFKYKADTLKVAQTGQDLKEEHPWVD 274
Query: 57 YTPPQYITLLFTDLGILTPSAVSDELIKLYL 87
YT P ITLLFTDLG+LTPSAVSDELIKLYL
Sbjct: 275 YTAPSLITLLFTDLGVLTPSAVSDELIKLYL 305
>sp|Q54I81|EI2BA_DICDI Translation initiation factor eIF-2B subunit alpha OS=Dictyostelium
discoideum GN=eif2b1 PE=3 SV=1
Length = 321
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 64/97 (65%), Gaps = 11/97 (11%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPN-----------EFKFTSSILKKENLS 49
+++ AK KKPFYV AESFKF R YPLNQ D+ N + SS E L+
Sbjct: 224 ISIVAKAFKKPFYVAAESFKFTRSYPLNQSDIENLKNDHISEPFKACRSCSSCENPEQLT 283
Query: 50 KYHPLVDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
P +DYTPP YITLLFT+LG+LTPSAVSDELIKLY
Sbjct: 284 IDSPTLDYTPPSYITLLFTELGVLTPSAVSDELIKLY 320
>sp|P34604|EI2BA_CAEEL Probable translation initiation factor eIF-2B subunit alpha
OS=Caenorhabditis elegans GN=ZK1098.4 PE=1 SV=1
Length = 305
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 63/87 (72%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPLVDYTPP 60
+ + AK P YV AE+ KFVR +PLNQ D+P EFK+ +S++++ NL HP VDYT P
Sbjct: 219 VCIIAKSRHVPVYVCAETIKFVREFPLNQADIPQEFKYRTSVIERNNLELEHPDVDYTAP 278
Query: 61 QYITLLFTDLGILTPSAVSDELIKLYL 87
+++TL+ TD+G + P AV +ELIK+Y+
Sbjct: 279 EFLTLIITDVGAMKPEAVGEELIKMYI 305
>sp|P14741|EI2BA_YEAST Translation initiation factor eIF-2B subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GCN3 PE=1
SV=1
Length = 305
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNE---FKFTSSILKKENLSKYHPLVDY 57
+ V A +KPFYV+ ES KFVR++PL+ DLP FT E+ + P +DY
Sbjct: 216 VGVLAHNARKPFYVVTESHKFVRMFPLSSDDLPMAGPPLDFTRRTDDLEDALR-GPTIDY 274
Query: 58 TPPQYITLLFTDLGILTPSAVSDELIKLY 86
T +YIT L TDLG+LTPSAVS+ELIK++
Sbjct: 275 TAQEYITALITDLGVLTPSAVSEELIKMW 303
>sp|Q9USP0|EI2BA_SCHPO Translation initiation factor eIF-2B subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif221 PE=3 SV=1
Length = 341
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 26/113 (23%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPN-----EFKFTS--------------- 40
+AV AK KPFY +AES KFVR++PL+Q D+P EF S
Sbjct: 229 LAVFAKHAHKPFYAVAESHKFVRMFPLSQYDIPFSRPILEFDDPSPETVHPEPEPIPTPS 288
Query: 41 -----SILKKENLSKYHPLVDYTPPQYITLLFTDLGIL-TPSAVSDELIKLYL 87
++ E + +P +D TPP++++ L TDLGI+ + S VS+ELIKLYL
Sbjct: 289 DAIHNELIMNEEQIRNNPTLDVTPPEFVSGLITDLGIIDSKSGVSEELIKLYL 341
>sp|Q4JB92|MTNA_SULAC Putative methylthioribose-1-phosphate isomerase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_0539 PE=3 SV=1
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 2 AVCAKELKKPFYVLAESFKFVRLYPLNQRDL----PNEFKFTSSI-LKKENLSKYHPLVD 56
AV A EL PFY LA S F + ++Q + P+E + + + + + Y+P+ D
Sbjct: 277 AVIAHELGIPFYALAPSSTFDMISTVDQVKIEERSPDEVRSIKGVYISPKEVKVYNPVFD 336
Query: 57 YTPPQYITLLFTDLGILTP 75
TPP+Y++ + T+ GI+ P
Sbjct: 337 VTPPKYVSAIITEYGIIYP 355
>sp|A8YD90|MTNA_MICAE Methylthioribose-1-phosphate isomerase OS=Microcystis aeruginosa
GN=mtnA PE=3 SV=1
Length = 353
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 1 MAVCAKELKKPFYVLAE------SFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV AK PFYV A S K P+ QRD ++ ++ L N++ Y+P
Sbjct: 264 LAVVAKAHNLPFYVAAPLSTVDFSLKDGTGIPIEQRDSAEIYQVGTTTLCPRNVNFYNPA 323
Query: 55 VDYTPPQYITLLFTDLGILTPS 76
D TP IT + T+ G +TP+
Sbjct: 324 FDVTPAALITAIITEKGAVTPA 345
>sp|Q90511|EI2BB_TAKRU Translation initiation factor eIF-2B subunit beta OS=Takifugu
rubripes GN=eif2b2 PE=3 SV=1
Length = 355
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSIL---KKENLSKYH---PL 54
+A+ AK P V A FK +P N+ D ++F +L + E LSK + P+
Sbjct: 258 LALAAKHHSTPLIVCAPMFKLSPQFP-NEEDTFHKFVSPHEVLPFTEGEILSKVNVHCPV 316
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
DY PP+ ITL +++G PS + + +LY
Sbjct: 317 FDYVPPELITLFISNIGGHAPSYIYRLMSELY 348
>sp|B0JPT8|MTNA_MICAN Methylthioribose-1-phosphate isomerase OS=Microcystis aeruginosa
(strain NIES-843) GN=mtnA PE=3 SV=1
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 1 MAVCAKELKKPFYVLAE------SFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV AK PFYV A S K P+ QRD ++ ++ L +++ Y+P
Sbjct: 264 LAVVAKAHNLPFYVAAPLSTVDFSLKDGTGIPIEQRDRAEIYQVGTTTLCPRDVNFYNPA 323
Query: 55 VDYTPPQYITLLFTDLGILTPS 76
D TP IT + T+ G +TP+
Sbjct: 324 FDVTPAALITAIITEKGAVTPA 345
>sp|Q5E9B4|EI2BB_BOVIN Translation initiation factor eIF-2B subunit beta OS=Bos taurus
GN=EIF2B2 PE=2 SV=1
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILK------KENLSKYHPL 54
+A+ AK P V A FK +P N+ D ++F +L E +S + P+
Sbjct: 254 LALAAKHHSTPLIVCAPMFKLSPQFP-NEEDSFHKFVAPEEVLPFTEGDILEKVSVHCPV 312
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
DY PP+ ITL +++G PS + + +LY
Sbjct: 313 FDYVPPELITLFISNIGGNAPSYIYRLMSELY 344
>sp|P49770|EI2BB_HUMAN Translation initiation factor eIF-2B subunit beta OS=Homo sapiens
GN=EIF2B2 PE=1 SV=3
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILK------KENLSKYHPL 54
+A+ AK P V A FK +P N+ D ++F +L E +S + P+
Sbjct: 254 LALAAKHHSTPLIVCAPMFKLSPQFP-NEEDSFHKFVAPEEVLPFTEGDILEKVSVHCPV 312
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
DY PP+ ITL +++G PS + + +LY
Sbjct: 313 FDYVPPELITLFISNIGGNAPSYIYRLMSELY 344
>sp|B2J5P6|MTNA_NOSP7 Methylthioribose-1-phosphate isomerase OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=mtnA PE=3 SV=1
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 18/97 (18%)
Query: 1 MAVCAKELKKPFYV----------LAESFKFVRLYPLNQRDLPNEFKFTSSILKKENLSK 50
+A+ AK PF+V LA+ K P+ +RD ++ +IL E +
Sbjct: 261 VAIAAKAHNIPFFVAAPLSTVDFELADGSKI----PIEERDPTEIYQVGDTILTPEGVDF 316
Query: 51 YHPLVDYTPPQYITLLFTDLGILTPSAVSDELIKLYL 87
Y+P D TP + IT + T+ G + P EL+KL L
Sbjct: 317 YNPAFDVTPAELITAIITENGAIAPG----ELVKLQL 349
>sp|Q8TUJ1|MTNA_METAC Putative methylthioribose-1-phosphate isomerase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0076 PE=3 SV=1
Length = 348
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 2 AVCAKELKKPFYVLA--ESFKFVRL---YPLNQRDLPNEFKFTS-SILKKENLSKYHPLV 55
++ AKE + PFYV A +F F + RD P+E +F+ L +++ Y+P
Sbjct: 261 SILAKEHEIPFYVAAPISTFDFKGWEGSVKIEMRD-PDELRFSGCQQLAPKDVEVYNPAF 319
Query: 56 DYTPPQYITLLFTDLGILTPSAVSDELI 83
D TP + +T + TD G+ P + DE++
Sbjct: 320 DATPMENVTAIITDKGVFYPPFLLDEVL 347
>sp|A5D1G8|MTNA_PELTS Methylthioribose-1-phosphate isomerase OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=mtnA PE=3 SV=1
Length = 364
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 1 MAVCAKELKKPFYVLAE------SFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV A+E K PFYV A S P+ +RD + E ++ ++P
Sbjct: 254 LAVLAREHKIPFYVAAPVSTIDLSLASGEEIPIEERDSSEVTHLAGRPVAPEGVNVWNPA 313
Query: 55 VDYTPPQYITLLFTDLGILTP 75
D TP + IT + TD GI+ P
Sbjct: 314 FDVTPARLITAIITDRGIVKP 334
>sp|P32502|EI2BB_YEAST Translation initiation factor eIF-2B subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GCD7 PE=1
SV=1
Length = 381
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 4 CAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILKK----ENLSKYHPLVDYTP 59
CA+E + P + +A +K LYP + EF + IL + + L + + DY P
Sbjct: 284 CAREFRTPVFAVAGLYKLSPLYPFDVEKFV-EFGGSQRILPRMDPRKRLDTVNQITDYVP 342
Query: 60 PQYITLLFTDLGILTPSAV 78
P+ I + T++G PS +
Sbjct: 343 PENIDIYITNVGGFNPSFI 361
>sp|Q62818|EI2BB_RAT Translation initiation factor eIF-2B subunit beta OS=Rattus
norvegicus GN=Eif2b2 PE=2 SV=1
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILK------KENLSKYHPL 54
+A+ AK P V A FK +P ++ D ++F +L E +S + P+
Sbjct: 254 LALAAKHHSTPLIVCAPMFKLSPQFP-SEEDSFHKFVAPEEVLPFTEGDILEKVSVHCPV 312
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
DY PP ITL +++G PS V + +LY
Sbjct: 313 FDYVPPDLITLFISNIGGNAPSYVYRLMSELY 344
>sp|Q9V281|EI2B2_PYRAB Putative translation initiation factor eIF-2B subunit 2
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aIF-2BII
PE=3 SV=1
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 1 MAVCAKELKKPFYVLAESFKFV------RLYPLNQRDLPNEFKFTSSILKK--ENLSKYH 52
+A+ AKE + + AE++KF +L + RD P E LK +N+ ++
Sbjct: 221 IALTAKEHRVWVMIAAETYKFHPETMLGQLVEIEMRD-PTEV-IPEEELKTWPKNIEVWN 278
Query: 53 PLVDYTPPQYITLLFTDLGILTPSAVSDEL 82
P D TPP+YI ++ T+ GI+ P A D L
Sbjct: 279 PAFDVTPPEYIDVIITEKGIIPPYAAIDIL 308
>sp|Q99LD9|EI2BB_MOUSE Translation initiation factor eIF-2B subunit beta OS=Mus musculus
GN=Eif2b2 PE=2 SV=1
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILK------KENLSKYHPL 54
+A+ AK P V A FK +P ++ D ++F +L E +S + P+
Sbjct: 254 LALAAKHHSTPLIVCAPMFKLSPQFP-SEEDSFHKFVAPEEVLPFTEGDILEKVSVHCPV 312
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
DY PP ITL +++G PS + + +LY
Sbjct: 313 FDYVPPDLITLFISNIGGNAPSYIYRLMSELY 344
>sp|Q28690|EI2BB_RABIT Translation initiation factor eIF-2B subunit beta OS=Oryctolagus
cuniculus GN=EIF2B2 PE=1 SV=1
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSIL---KKENLSK---YHPL 54
+A+ AK P V A FK +P N+ D ++F +L + + L K + P+
Sbjct: 254 LALAAKHHSTPLIVCAPMFKLSPQFP-NEEDSFHKFVAPEEVLPFTEGDILDKVGCHCPV 312
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
DY PP+ ITL +++G PS + + +LY
Sbjct: 313 FDYVPPELITLFISNIGGNAPSYIYRLMSELY 344
>sp|O57947|EI2B2_PYRHO Putative translation initiation factor eIF-2B subunit 2
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428
/ JCM 9974 / NBRC 100139 / OT-3) GN=PH0208 PE=3 SV=1
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILKKE-------NLSKYHP 53
+A+ AKE + + AE++KF L Q + E + + ++ +E N+ ++P
Sbjct: 221 IALTAKEHRVWVMIAAETYKFHPATMLGQL-VEIEMRDPTEVIPEEELRTWPKNIEVWNP 279
Query: 54 LVDYTPPQYITLLFTDLGILTPSAVSDEL 82
D TPP+YI ++ T+ GI+ P A D L
Sbjct: 280 AFDVTPPEYIDVIITERGIIPPYAAIDIL 308
>sp|Q8U4G6|EI2B2_PYRFU Putative translation initiation factor eIF-2B subunit 2
OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 /
JCM 8422 / Vc1) GN=PF0122 PE=3 SV=2
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKY-------HP 53
+A+ AKE + + AE++KF L Q + E + + ++ KE L + +P
Sbjct: 221 IALTAKEHRVWVMIAAETYKFHPETMLGQL-VEIEMRDPTEVVPKEELETWPKNIEVLNP 279
Query: 54 LVDYTPPQYITLLFTDLGILTPSAVSDEL 82
D TPP+YI ++ T+ G++ P A D L
Sbjct: 280 AFDVTPPEYIDVIITEKGVIPPYAAIDIL 308
>sp|A3DD27|MTNA_CLOTH Methylthioribose-1-phosphate isomerase OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=mtnA PE=3 SV=1
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 1 MAVCAKELKKPFYVLAE------SFKFVRLYPLNQRDLPNEFKFTSSI-LKKENLSKYHP 53
+AV AKE PFYV A S + P+ +R P E I + E + +P
Sbjct: 252 LAVLAKENNIPFYVAAPTTTIDFSIETGEQIPIEERS-PAEITHIKGIRIAPEGVKVRNP 310
Query: 54 LVDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
D TP +YI+ + T+ GI+ P DE IK Y
Sbjct: 311 AFDVTPNKYISAIITEKGIIYPP--YDENIKKY 341
>sp|B1WQH2|MTNA_CYAA5 Methylthioribose-1-phosphate isomerase OS=Cyanothece sp. (strain
ATCC 51142) GN=mtnA PE=3 SV=2
Length = 345
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 1 MAVCAKELKKPFYVLAE------SFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV AK + PFYV A S + L P+ +RD ++ ++++ + + Y+P
Sbjct: 257 LAVIAKMHQVPFYVAAPLSTVDFSLETGDLIPIEERDPSELYQIGNTVIYPDGVDYYNPA 316
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDELIKL 85
D TP IT + T+ + P ELI L
Sbjct: 317 FDVTPADLITGIITEQKTVNPK----ELITL 343
>sp|Q3ABU6|MTNA_CARHZ Methylthioribose-1-phosphate isomerase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=mtnA PE=3
SV=1
Length = 343
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNE-------FKFTSSILKKENLSKYHP 53
+A+ AKE PFYV A + + L + +D+P E K ++ + ++P
Sbjct: 250 LAILAKEHGIPFYV-AAPYSTIDLNLTSGQDIPIEERNPDEVRKIGDRLIAPPQVKVFNP 308
Query: 54 LVDYTPPQYITLLFTDLGILTP 75
D TP +YIT + TD GI+ P
Sbjct: 309 AFDVTPAKYITGIITDRGIVRP 330
>sp|B1XJK0|MTNA_SYNP2 Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=mtnA PE=3 SV=2
Length = 346
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 1 MAVCAKELKKPFYVLAE------SFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+A+ AK PF+V A S + P+ +RD ++ + + E + Y+P
Sbjct: 258 LAIVAKAHNVPFFVAAPLSTVDFSLSDGKQIPIEERDPKEVYQIGDTRICPEGVQFYNPA 317
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDELIKL 85
D TP IT + T+ G + P D+LI L
Sbjct: 318 FDVTPAHLITAIITEKGAVAP----DQLIHL 344
>sp|Q2RKL8|MTNA_MOOTA Methylthioribose-1-phosphate isomerase OS=Moorella thermoacetica
(strain ATCC 39073) GN=mtnA PE=3 SV=1
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 1 MAVCAKELKKPFYVLAESFKFV------RLYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+A+ A+E PFYV A + F P+ +RD F E + ++P
Sbjct: 256 VAILAREHGIPFYVAAPASTFDLSLSGGEQIPIEERDPAEVSHFGLRPTAPEGIGIFNPA 315
Query: 55 VDYTPPQYITLLFTDLGILTP 75
D TP +Y+T + T+ G++ P
Sbjct: 316 FDVTPYRYVTAIITEKGVIRP 336
>sp|Q8U3J1|EI2BL_PYRFU Putative translation initiation factor eIF-2B subunit 2-like
OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 /
JCM 8422 / Vc1) GN=PF0475 PE=3 SV=1
Length = 276
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPLVDYTPP 60
+A+ E + PFYV AE++KF +Q+ E + L +E + L D TP
Sbjct: 203 LAISCYESEVPFYVAAETYKF------HQKITSKEVELVERPLYREGSRVRNVLFDITPW 256
Query: 61 QYITLLFTDLGILTP 75
++I + T+LGI+ P
Sbjct: 257 KFIRGIITELGIILP 271
>sp|B1I2P1|MTNA_DESAP Methylthioribose-1-phosphate isomerase OS=Desulforudis audaxviator
(strain MP104C) GN=mtnA PE=3 SV=1
Length = 348
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFK-------FTSSILKKENLSKYHP 53
+AV A+ PFYV A V L RD+P E + F + + ++ ++P
Sbjct: 252 LAVLARAHGIPFYV-AVPLSTVDLRTAIGRDIPIEERDPAELTHFRGRRVAPQGVAVWNP 310
Query: 54 LVDYTPPQYITLLFTDLGILTP 75
D TP + IT L TD G+L P
Sbjct: 311 AFDVTPNELITALITDAGVLKP 332
>sp|O28242|EI2B2_ARCFU Putative translation initiation factor eIF-2B subunit 2
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2037 PE=3 SV=1
Length = 313
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 17/85 (20%)
Query: 1 MAVCAKELKKPFYVLAESFKFV------RLYPLNQRD----LPNEFKFTSSILKKENLSK 50
+A+ AKE + PF V AE++KF L + +RD P E + K +
Sbjct: 207 IALAAKEARVPFMVAAETYKFSPKTLFGELVVIEERDAREVAPEE-------ILKLGVKV 259
Query: 51 YHPLVDYTPPQYITLLFTDLGILTP 75
+P D TP YI ++ T++G + P
Sbjct: 260 RNPAFDVTPRDYIDVIITEIGAIPP 284
>sp|B0TH58|MTNA_HELMI Methylthioribose-1-phosphate isomerase OS=Heliobacterium
modesticaldum (strain ATCC 51547 / Ice1) GN=mtnA PE=3
SV=1
Length = 345
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 1 MAVCAKELKKPFYVLAE------SFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+A+ AK PFYV A S + P+ +RD + SI + Y+P
Sbjct: 252 VALAAKAHGIPFYVAAPVSTFDLSLESGLQIPIEERDTEEVRRVGDSITAPPGVPVYNPA 311
Query: 55 VDYTPPQYITLLFTDLGILTP 75
D TP + +T TD G+ P
Sbjct: 312 FDVTPAELVTAFITDRGVFRP 332
>sp|B0C8J2|MTNA_ACAM1 Methylthioribose-1-phosphate isomerase OS=Acaryochloris marina
(strain MBIC 11017) GN=mtnA PE=3 SV=1
Length = 355
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1 MAVCAKELKKPFYVLA--ESFKFVRL----YPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+A+CAK PFYV A + F P+ +R ++ ++ + + + Y+P
Sbjct: 262 VALCAKAHNLPFYVAAPLSTIDFDLADGGGIPIEERHPSEIYQIGTTDICPKGVEFYNPA 321
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDEL 82
D TP + IT + T+ G+ P + ++L
Sbjct: 322 FDVTPAELITGIITEHGVFAPGDIREKL 349
>sp|Q9UYB6|EI2BL_PYRAB Putative translation initiation factor eIF-2B subunit 2-like
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB15920
PE=3 SV=1
Length = 276
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPLVDYTPP 60
+A+ E PFYV AE++KF N+ L +E F+ S + N+ L D TP
Sbjct: 203 LALACHESDVPFYVAAETYKFHPTVKSNEVVL-HERDFSRSGFRVRNV-----LFDLTPW 256
Query: 61 QYITLLFTDLGILTP 75
++I + T+LGI+ P
Sbjct: 257 KFIRGIITELGIVIP 271
>sp|B3RLE6|MTNA_TRIAD Methylthioribose-1-phosphate isomerase OS=Trichoplax adhaerens
GN=TRIADDRAFT_19292 PE=3 SV=1
Length = 360
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 1 MAVCAKELKKPFYVLAESFKFV----RLYPLNQRDLPNEFKFTSSILKKENLSKYHPLVD 56
+A+ AK K PFY+ A + V + + +R + + ++ Y+P D
Sbjct: 269 LAITAKYHKIPFYIAAPTTTIVLDDSKDIVIEERSHKEVTEIQGIPIAPSGINVYNPAFD 328
Query: 57 YTPPQYITLLFTDLGILTPSAVSDEL 82
TP + IT + T++G+ +PS + +L
Sbjct: 329 VTPAELITGIITEVGVFSPSEMKSKL 354
>sp|Q54EY2|EI2BB_DICDI Translation initiation factor eIF-2B subunit beta OS=Dictyostelium
discoideum GN=eif2b2 PE=3 SV=1
Length = 388
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSILK------KENLSKYHPL 54
+AV AK P V +K LY +Q D N F LK EN+ Y+P
Sbjct: 289 LAVAAKYHSVPIVVCTGLYKLCPLYAYDQ-DTFNNFGSPGEYLKFEEAEFLENVHSYNPT 347
Query: 55 VDYTPPQYITLLFTDLGILTPS 76
DY P ++L T++G PS
Sbjct: 348 FDYVAPDLVSLFITNIGGHNPS 369
>sp|Q5SJE2|MTNA_THET8 Methylthioribose-1-phosphate isomerase OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=mtnA PE=3 SV=1
Length = 330
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 1 MAVCAKELKKPFYV-LAESFKFVRL-----YPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV A PFY L S RL P+ +R F + E YHP
Sbjct: 237 LAVLAHHHGIPFYAALPLSSVDPRLASGEGIPIEERSPEEVVAFRGVRIAPEGFPAYHPA 296
Query: 55 VDYTPPQYITLLFTDLGILTP 75
D TP +Y+T + T+ G+L P
Sbjct: 297 FDVTPHRYLTGIITEKGVLYP 317
>sp|Q72JR1|MTNA_THET2 Methylthioribose-1-phosphate isomerase OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=mtnA PE=3
SV=1
Length = 330
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 1 MAVCAKELKKPFYV-LAESFKFVRL-----YPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV A PFY L S RL P+ +R F + E YHP
Sbjct: 237 LAVLAHHHGIPFYAALPLSSVDPRLASGEGIPIEERSPEEVVAFRGVRIAPEGFPAYHPA 296
Query: 55 VDYTPPQYITLLFTDLGILTP 75
D TP +Y+T + T+ G+L P
Sbjct: 297 FDVTPHRYLTGIITEKGVLYP 317
>sp|P74497|MTNA_SYNY3 Methylthioribose-1-phosphate isomerase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=mtnA PE=3 SV=1
Length = 351
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 1 MAVCAKELKKPFYVLA--ESFKFV----RLYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV AK PF+V A + F P+ +RD ++ + + E Y+P
Sbjct: 263 LAVLAKMHAIPFFVAAPLSTVDFALDDGSQIPIEERDPVEIYQPEGNRITPEGAEFYNPA 322
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSD 80
D TP IT + T+ G + P ++D
Sbjct: 323 FDVTPASLITAIITEQGAIAPEKLAD 348
>sp|Q57896|MTNA_METJA Putative methylthioribose-1-phosphate isomerase
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0454
PE=3 SV=1
Length = 329
Score = 35.8 bits (81), Expect = 0.073, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 1 MAVCAKELKKPFYVLAESFKF-VRLYP----LNQRDLPNEFKFTSSI-LKKENLSKYHPL 54
+AV AK + PFYV A F +R + +RD E + + + E + Y+
Sbjct: 240 LAVLAKYHRIPFYVAAPLSTFDLRSSEEDVIIEERD-EKEVAYIDGVRIVPEGVGCYNYA 298
Query: 55 VDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
D TPP IT + T+ GI+ P+ DE++KL+
Sbjct: 299 FDKTPPDLITAIITEKGIVKPN--RDEILKLF 328
>sp|B9LBK4|MTNA_CHLSY Methylthioribose-1-phosphate isomerase OS=Chloroflexus aurantiacus
(strain ATCC 29364 / DSM 637 / Y-400-fl) GN=mtnA PE=3
SV=1
Length = 347
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRL-------YPLNQRDLPNEFKFTSSI-LKKENLSKYH 52
+AV A+ PFYV A S + L P+ +RD P E + + + + + H
Sbjct: 254 LAVLARYHNIPFYVAAPS-STIDLATASGADIPIEERD-PAEVTHIAGVAIAPQGVRAAH 311
Query: 53 PLVDYTPPQYITLLFTDLGILTP 75
P D TP + +T + T+ GI+ P
Sbjct: 312 PAFDVTPNELVTAIITERGIVRP 334
>sp|A9WGQ8|MTNA_CHLAA Methylthioribose-1-phosphate isomerase OS=Chloroflexus aurantiacus
(strain ATCC 29366 / DSM 635 / J-10-fl) GN=mtnA PE=3
SV=1
Length = 347
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRL-------YPLNQRDLPNEFKFTSSI-LKKENLSKYH 52
+AV A+ PFYV A S + L P+ +RD P E + + + + + H
Sbjct: 254 LAVLARYHNIPFYVAAPS-STIDLATASGADIPIEERD-PAEVTHIAGVAIAPQGVRAAH 311
Query: 53 PLVDYTPPQYITLLFTDLGILTP 75
P D TP + +T + T+ GI+ P
Sbjct: 312 PAFDVTPNELVTAIITERGIVRP 334
>sp|Q8U178|MTNA_PYRFU Putative methylthioribose-1-phosphate isomerase OS=Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1349 PE=3 SV=1
Length = 356
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 1 MAVCAKELKKPFYVLAE------SFKFVRLYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV AKE PF+ +A S + P+ +R P E ++ Y+P
Sbjct: 264 LAVLAKEHGIPFFTVAPLSSIDMSLSSGKEIPIEERS-PEEVLTCGGCRIAPDVPVYNPA 322
Query: 55 VDYTPPQYITLLFTDLGILTP 75
D TP +Y+T + TD G++ P
Sbjct: 323 FDVTPHKYLTGIITDRGVVWP 343
>sp|A7Z3X0|MTNA_BACA2 Methylthioribose-1-phosphate isomerase OS=Bacillus
amyloliquefaciens (strain FZB42) GN=mtnA PE=3 SV=1
Length = 353
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 1 MAVCAKELKKPFYVLAESFKF-VRL-----YPLNQRDLPNEFKFTSSI-LKKENLSKYHP 53
+A+ A + PF+V A F +++ P+ +RD P+E + S I E++ ++P
Sbjct: 257 LAILANAFQIPFFVAAPLSTFDLQIENGDQIPIEERD-PDEVRQISGIRTAPEDVPVFNP 315
Query: 54 LVDYTPPQYITLLFTDLGILTPSAVSDELIKLY 86
D TP I+ + T+ GI+T S ++E+ +L+
Sbjct: 316 AFDITPGSLISGIITEKGIVTGS-YTEEIEQLF 347
>sp|Q5L1E6|MTNA_GEOKA Methylthioribose-1-phosphate isomerase OS=Geobacillus kaustophilus
(strain HTA426) GN=mtnA PE=3 SV=1
Length = 355
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 1 MAVCAKELKKPFYVLAESFKFVRLYPLNQRDLPNEFKFTSSI-------LKKENLSKYHP 53
+A+ AK PFYV A + L D+P E + + + E ++ Y+P
Sbjct: 256 LALLAKSFDIPFYV-AAPLSTIDLTTKTGADIPIEERHPDEVTHIAGVRIAPEGVNVYNP 314
Query: 54 LVDYTPPQYITLLFTDLGIL 73
D TP + IT + T+ GI+
Sbjct: 315 AFDVTPNELITAIITEKGII 334
>sp|C6E6Z4|MTNA_GEOSM Methylthioribose-1-phosphate isomerase OS=Geobacter sp. (strain
M21) GN=mtnA PE=3 SV=1
Length = 346
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 1 MAVCAKELKKPFYVLAE----SFKFVR--LYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV AKE + PFYV A K L P+ +R + + E + +P
Sbjct: 254 VAVLAKENRIPFYVAAPISTLDLKLANGDLIPIEERASEEVTQIKGIQIAPEGVKVRNPA 313
Query: 55 VDYTPPQYITLLFTDLGIL 73
D TP +YIT + T+ G++
Sbjct: 314 FDVTPARYITGIITEKGVV 332
>sp|B5ED21|MTNA_GEOBB Methylthioribose-1-phosphate isomerase OS=Geobacter bemidjiensis
(strain Bem / ATCC BAA-1014 / DSM 16622) GN=mtnA PE=3
SV=1
Length = 346
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 1 MAVCAKELKKPFYVLAE----SFKFVR--LYPLNQRDLPNEFKFTSSILKKENLSKYHPL 54
+AV AKE + PFYV A K L P+ +R + + E + +P
Sbjct: 254 VAVLAKENRIPFYVAAPISTLDLKLANGDLIPIEERASEEVTQIKGIQIAPEGVKVRNPA 313
Query: 55 VDYTPPQYITLLFTDLGIL 73
D TP +YIT + T+ G++
Sbjct: 314 FDVTPARYITGIITEKGVV 332
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,296,169
Number of Sequences: 539616
Number of extensions: 1199728
Number of successful extensions: 2613
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 2511
Number of HSP's gapped (non-prelim): 153
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)