RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy6495
(235 letters)
>gnl|CDD|223398 COG0321, LipB, Lipoate-protein ligase B [Coenzyme metabolism].
Length = 221
Score = 199 bits (507), Expect = 2e-64
Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 14/218 (6%)
Query: 1 MTKQVQLVR-LGVVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSL 59
++ LVR LG+V Y ++ E + + + + L+EH PVYT G
Sbjct: 6 SKPKIILVRELGLVDYQEAWQLMETFTDARADGGTPD-----EIWLVEHPPVYTAGQAG- 59
Query: 60 KEYDENLELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQT 119
E L +T+RGG +T+HGPGQLVAYPI++LK ++ +V+++EQ
Sbjct: 60 -----KAEHLLMPDDIPVVQTDRGGQVTYHGPGQLVAYPILDLKRPKLDVREYVRALEQA 114
Query: 120 VIQLCKQEFSLNAGLIPKYTGVFLDDEYKVCAIGVHSSLYITHHGLAINCDTDLTWFNHI 179
VI E+ + A P GV++++E K+ AIG+ +T HGLA+N + DL+ FN I
Sbjct: 115 VINTLA-EYGIEAERRPDRPGVWVEEERKIAAIGIRIRRGVTFHGLALNVNMDLSPFNRI 173
Query: 180 TPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVF 217
PCG +VTSLS L +TVD V F +
Sbjct: 174 VPCGYAGMEVTSLSD-LGPPVTVDEVAKALVAAFAKLL 210
>gnl|CDD|184638 PRK14345, PRK14345, lipoate-protein ligase B; Provisional.
Length = 234
Score = 165 bits (421), Expect = 3e-51
Identities = 80/221 (36%), Positives = 112/221 (50%), Gaps = 23/221 (10%)
Query: 5 VQLVRLGVVSYSNGIKIQEHYVNKLKTLISKPSNHSG--TLLLLEHKPVYTIGIRSLKEY 62
+++ RLG+V Y +Q + L G TLLLLEH VYT G R+
Sbjct: 12 IEVRRLGLVDYQEAWDLQ-------RELADARVAGEGPDTLLLLEHPAVYTAGKRTEPH- 63
Query: 63 DENLELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQTVIQ 122
E + G +RGG IT+HGPGQLV YPII L + +V+ +E+ +I
Sbjct: 64 ----ERPTD--GTPVVDVDRGGKITWHGPGQLVGYPIIKLAE-PLDVVDYVRRLEEALIA 116
Query: 123 LCKQEFSLNAGLIPKYTGVFL--DD---EYKVCAIGVHSSLYITHHGLAINCDTDLTWFN 177
+C + LNAG + +GV++ D + K+ AIG+ S +T HG A+NCD DL F+
Sbjct: 117 VC-ADLGLNAGRVDGRSGVWVPADGGRPDRKIAAIGIRVSRGVTMHGFALNCDNDLAAFD 175
Query: 178 HITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVFE 218
I PCGI D VT+LS L + +TV VV +
Sbjct: 176 AIVPCGISDAGVTTLSAELGRTVTVAEVVDPVAAALCDALD 216
>gnl|CDD|232877 TIGR00214, lipB, lipoate-protein ligase B. Involved in lipoate
biosynthesis as the main determinant of the
lipoyl-protein ligase activity required for lipoylation
of enzymes such as alpha-ketoacid dehydrogenases.
Involved in activation and re-activation (following
denaturation) of lipoyl-protein ligases (calcium
ion-dependant process) [Protein fate, Protein
modification and repair].
Length = 184
Score = 154 bits (390), Expect = 3e-47
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Query: 43 LLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINL 102
++L+EH PVYT G E+ L + A+ ++ RGG +T+HGPGQ V Y I++L
Sbjct: 15 IMLVEHYPVYTQGQAGKTEH---LLFDPDIPPAEVVQSERGGQVTYHGPGQQVMYVILDL 71
Query: 103 KHFTPSIKWFVQSIEQTVIQLCKQEFSLNAGLIPKYTGVFLDDEYKVCAIGVHSSLYITH 162
K F ++W V +EQTVI E + I TGV++ + KV ++G+ T
Sbjct: 72 KRFQLDVRWLVTQLEQTVIITLA-ELGIEGEPIADATGVWV-EGKKVASLGIRVRRGCTF 129
Query: 163 HGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVF 217
HGLA+N + DL+ F+HI PCG +++ SL++ L TV+ V PL K F +
Sbjct: 130 HGLALNINMDLSPFSHINPCGYAGREMGSLNQFLPG-ATVENVAPLLIKAFAELL 183
>gnl|CDD|172824 PRK14348, PRK14348, lipoate-protein ligase B; Provisional.
Length = 221
Score = 150 bits (380), Expect = 2e-45
Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 7/204 (3%)
Query: 7 LVRLGVVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENL 66
++ YS Q + + L ++ ++ EH VYT+G RS KE + L
Sbjct: 5 TTDWELIPYSEAWSRQTEWFDALVHAKQNGESYENRIIFCEHPHVYTLG-RSGKENNMLL 63
Query: 67 -ELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQTVIQLCK 125
E +L +GA Y +RGG IT+HGPGQLV YPI+NL+ F +K +V +E+ VI++C
Sbjct: 64 GEEQLKTIGATLYHIDRGGDITYHGPGQLVCYPILNLEEFGLGLKEYVHLLEEAVIRVCA 123
Query: 126 QEFSLNAGLIPKYTGVFLDDEY----KVCAIGVHSSLYITHHGLAINCDTDLTWFNHITP 181
+ + AG + K TGV+L+ + K+CAIGV SS Y+T HGLA+N +TDL +F++I P
Sbjct: 124 S-YGVVAGRLEKATGVWLEGDTSRARKICAIGVRSSHYVTMHGLALNVNTDLRYFSYIHP 182
Query: 182 CGIKDKQVTSLSKHLSKDITVDTV 205
CG DK VTSL + L I + V
Sbjct: 183 CGFIDKGVTSLQQELGHSIDMAEV 206
>gnl|CDD|237683 PRK14344, PRK14344, lipoate-protein ligase B; Provisional.
Length = 223
Score = 145 bits (369), Expect = 2e-43
Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 10/192 (5%)
Query: 20 KIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYK 79
K Q+ + + LI PSN + LLEH+ YT+G R E +NL LN AD ++
Sbjct: 34 KWQKEW---QQALIEDPSN-PQAVWLLEHQLCYTLG-RGASE--DNLLFSLNNPPADVFR 86
Query: 80 TNRGGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQTVIQLCKQEFSLNAGLIPKYT 139
+RGG +T H PGQLV Y +++L+ F + W+++ +EQ +I + ++ + T
Sbjct: 87 IDRGGEVTHHMPGQLVTYLVLDLRRFNKDLNWYLRQLEQVLIDVLAD-LGIDGERLDGLT 145
Query: 140 GVFLDDEYKVCAIGVHSSLYITHHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKD 199
GV++ ++ KV +IG+ +IT HG ++N D DL FN I PCG++ QV LS +
Sbjct: 146 GVWIGNK-KVASIGIGCRRWITQHGFSLNVDCDLEGFNKIVPCGLEGCQVGRLSDWI-PG 203
Query: 200 ITVDTVVPLFKK 211
+ + V PL KK
Sbjct: 204 LNIKEVKPLLKK 215
>gnl|CDD|237680 PRK14341, PRK14341, lipoate-protein ligase B; Provisional.
Length = 213
Score = 130 bits (329), Expect = 1e-37
Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 15/180 (8%)
Query: 45 LLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINLKH 104
LLEH P+YT G S K E+L L+ Y+T RGG T+HGPGQ VAY +++LK
Sbjct: 40 LLEHPPLYTAGT-SAK--AEDL---LDPDRFPVYETGRGGQYTYHGPGQRVAYVMLDLKR 93
Query: 105 FTPSIKWFVQSIEQTVIQLCKQEFSLNAGLIPKYTGVFLDD-------EYKVCAIGVHSS 157
++ FV ++E+ +I F++ GV++ E K+ AIGV
Sbjct: 94 RRRDVRAFVAALEEWIIATLA-AFNIRGERREDRVGVWVRRPDKGSGAEDKIAAIGVRLR 152
Query: 158 LYITHHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVF 217
+++ HG++IN + DL+ F+ I PCGI + VTSL L +T+D V KK FE VF
Sbjct: 153 RWVSFHGISINVEPDLSHFSGIVPCGISEHGVTSLVD-LGLPVTMDDVDAALKKAFEKVF 211
>gnl|CDD|237681 PRK14342, PRK14342, lipoate-protein ligase B; Provisional.
Length = 213
Score = 112 bits (282), Expect = 1e-30
Identities = 62/177 (35%), Positives = 90/177 (50%), Gaps = 17/177 (9%)
Query: 45 LLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINLKH 104
L+EH PV+T G E+ LN +++RGG +T+HGPGQLV Y +++LK
Sbjct: 40 LVEHPPVFTQGQAGKPEH------ILNPGDIPVVQSDRGGQVTYHGPGQLVMYVLLDLKR 93
Query: 105 FTPSIKWFVQSIEQTVIQLCKQEFSLNAGLIPKYTGVFLDDEYKVCAIGVHSSLYITH-- 162
++ V +IEQTVI E+ + A P GV++ D K+ ++G L I
Sbjct: 94 LKLGVRQLVTAIEQTVINTLA-EYGIEAHAKPDAPGVYV-DGKKIASLG----LRIRRGC 147
Query: 163 --HGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVF 217
HGLA+N + DL+ F I PCG ++T LS L TVD V P ++
Sbjct: 148 SFHGLALNVNMDLSPFLRINPCGYAGLEMTQLSD-LGGPATVDEVAPRLLAELLALL 203
>gnl|CDD|172823 PRK14347, PRK14347, lipoate-protein ligase B; Provisional.
Length = 209
Score = 104 bits (260), Expect = 2e-27
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 18/188 (9%)
Query: 13 VSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENLELKLNK 72
Y +K+ E YVNK+ + + + L+EH VYT G +E EL LN
Sbjct: 11 ADYQVTLKLMEDYVNKVIS-----DHEPEIVYLVEHSEVYTAGTNYKQE-----EL-LNY 59
Query: 73 LGADFYKTNRGGLITFHGPGQLVAYPIINLK--HFTPSIKWFVQSIEQTVIQLCKQEFSL 130
T RGG TFHGPGQ V YPI+NL + +K +++ +E+ +I F +
Sbjct: 60 GDIPVIYTGRGGKFTFHGPGQRVIYPILNLASPNRHKDLKLYIKMLEEWIIN-SLNYFGI 118
Query: 131 NAGLIPKYTGVFL---DDEY-KVCAIGVHSSLYITHHGLAINCDTDLTWFNHITPCGIKD 186
A +I G+++ DE+ K+ AIGV ++T+HG+AIN TDL+ F+ I PCG+++
Sbjct: 119 KAYIIKDKVGIWVKVRKDEFAKIAAIGVRVRKWVTYHGVAINISTDLSKFSGIIPCGLEN 178
Query: 187 KQVTSLSK 194
VTSL++
Sbjct: 179 SLVTSLNQ 186
>gnl|CDD|237684 PRK14346, PRK14346, lipoate-protein ligase B; Provisional.
Length = 230
Score = 99.1 bits (247), Expect = 2e-25
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 34/178 (19%)
Query: 43 LLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINL 102
L + EH PVYT G L +++ LN TNRGG +T+HGPGQ+VAYP+I+L
Sbjct: 35 LWICEHPPVYTQG---LAGKADHV---LNPGDIPVVATNRGGQVTYHGPGQVVAYPLIDL 88
Query: 103 KHFTPSIKWFVQSIEQTVIQLCKQEFSLNAGLIPKYTGVF--LDDEY------------- 147
+ +K +V IE+ VI+ F + + G++ LDD +
Sbjct: 89 RRAGYFVKEYVYRIEEAVIR-TLAHFGVTGHRVAGAPGIYVRLDDPFSHAALPQRPQKRG 147
Query: 148 ------------KVCAIGVHSSLYITHHGLAINCDTDLTWFNHITPCGIKDKQVTSLS 193
K+ A+G+ S + T+HG+A+N DL F+ I PCG Q LS
Sbjct: 148 GGAPQPPFRGLGKIAALGIKVSRHCTYHGVALNVAMDLEPFSRINPCGYAGLQTVDLS 205
>gnl|CDD|237682 PRK14343, PRK14343, lipoate-protein ligase B; Provisional.
Length = 235
Score = 93.7 bits (233), Expect = 2e-23
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 16/186 (8%)
Query: 2 TKQVQLVRLGVVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKE 61
V + G Y + + ++ ++ + L+EH PVYT+G
Sbjct: 12 ALPVTVRWRGREPYEACFDAMRAFTD------ARTADTPDEIWLVEHPPVYTLGQAGDPA 65
Query: 62 YDENLELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQTVI 121
+ L + G K +RGG IT+HGPGQ+VAY +++L+ ++ V IEQ VI
Sbjct: 66 H-----LLVADSGIPLVKVDRGGQITYHGPGQVVAYLLLDLRRRKLMVRELVTRIEQAVI 120
Query: 122 QLCKQEFSLNAGLIPKYTGVFLDDEY----KVCAIGVHSSLYITHHGLAINCDTDLTWFN 177
++L + G+++ K+ A+G+ ++HGL++N DL F
Sbjct: 121 D-TLAAYNLASERKAGAPGIYVASGPHQGAKIAALGLKIRNGCSYHGLSLNVKMDLRPFL 179
Query: 178 HITPCG 183
I PCG
Sbjct: 180 AINPCG 185
>gnl|CDD|172825 PRK14349, PRK14349, lipoate-protein ligase B; Provisional.
Length = 220
Score = 86.6 bits (214), Expect = 1e-20
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 45 LLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINLKH 104
L EH PVYT+G E+ LN +RGG +T+HGPGQ++AY + +L+
Sbjct: 35 LCEHAPVYTLGQAGRPEH------LLNPGLIPVVHCDRGGQVTYHGPGQVLAYTLFDLRR 88
Query: 105 FTPSIKWFVQSIEQTVIQLCKQEFSLNAGLIPKYTGVFLDDE----YKVCAIGVHSSLYI 160
++ +V +EQ + ++ A P G+++ K+ A+GV
Sbjct: 89 AGLYVREYVDMLEQATLATLRELGLEQACRKPGAPGIYVPQPGGELAKIAALGVKVRNGY 148
Query: 161 THHGLAINCDTDLTWFNHITPCGIKDKQVTSLS 193
+HGLA+N D DL+ F I PCG + + L+
Sbjct: 149 AYHGLALNIDMDLSPFLGINPCGYEGLRTVDLA 181
>gnl|CDD|217367 pfam03099, BPL_LplA_LipB, Biotin/lipoate A/B protein ligase family.
This family includes biotin protein ligase,
lipoate-protein ligase A and B. Biotin is covalently
attached at the active site of certain enzymes that
transfer carbon dioxide from bicarbonate to organic
acids to form cellular metabolites. Biotin protein
ligase (BPL) is the enzyme responsible for attaching
biotin to a specific lysine at the active site of biotin
enzymes. Each organism probably has only one BPL. Biotin
attachment is a two step reaction that results in the
formation of an amide linkage between the carboxyl group
of biotin and the epsilon-amino group of the modified
lysine. Lipoate-protein ligase A (LPLA) catalyzes the
formation of an amide linkage between lipoic acid and a
specific lysine residue in lipoate dependent enzymes.
The unusual biosynthesis pathway of lipoic acid is
mechanistically intertwined with attachment of the
cofactor.
Length = 124
Score = 60.5 bits (147), Expect = 5e-12
Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 21/132 (15%)
Query: 54 IGIRSLKEYDENLELKLNKLGADFYKTNRGGLITFHGPGQLVAYPIINLK----HFTPSI 109
+G R +E L + G + GG +H PG +AY ++ L +
Sbjct: 1 LGRRQKSTKEEVNLEGLEEGGVVVARRQTGGRRVWHSPGGNLAYSLLLLPELKSFKPSDL 60
Query: 110 KWFVQSIEQTVIQLCKQEFSLNAGLIPKYTGVFLD---------DEYKVCAIGVHSSLYI 160
+V + V++ G G+++ + K+ I
Sbjct: 61 PAYVLLLVLAVLEAL--------GPKAGIPGIWVRIKWPNDLLVNGKKIAGILQEIRRGG 112
Query: 161 THHGLAINCDTD 172
T H + +
Sbjct: 113 TLHHGTLGIGIN 124
>gnl|CDD|223173 COG0095, LplA, Lipoate-protein ligase A [Coenzyme metabolism].
Length = 248
Score = 35.4 bits (82), Expect = 0.016
Identities = 46/211 (21%), Positives = 70/211 (33%), Gaps = 30/211 (14%)
Query: 37 SNHSGTLLLLEHKPVYT-IGIRSLKEYDENLELKLNKLGADFYKTNR---GGLITFHGPG 92
+ GTL L P +G + NLE + D R GG FH G
Sbjct: 28 LSEGGTLRLYWWNPPTVVLGRFQNTLPEVNLE----YVKEDGIPVVRRPSGGGAVFHDLG 83
Query: 93 QLVAYPII-NLKHFTPSIKWFVQSIEQTVIQLCKQEFSLNAGLIPKYTGVFLDDEYKVCA 151
L Y +I + S + + + Q VI + A + V D K+
Sbjct: 84 NL-NYSVITPDEGGLESYETLYKFLLQPVIDALRALGVEGAECPGRNDLVV--DGKKISG 140
Query: 152 IGVHSSLYIT-----HHG---LAINCDTDLTWFNHITPCGIKDKQVTSLSKHLS-----K 198
T HHG L I+ + + IK K + S+ + ++
Sbjct: 141 SAQ----RRTKGRILHHGTLLLDIDLELLARVLR-VPKEKIKSKGIKSVRERVANLEELL 195
Query: 199 DITVDTVVPLFKKHFESVFECECSEVELDEE 229
I+V+ + + F V E E EL E
Sbjct: 196 KISVEEFLEALLEAFFKVLGVELEEYELTPE 226
>gnl|CDD|220429 pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of
this family of bacterial proteins comprise various
hypothetical proteins, as well as CRISPR (clustered
regularly interspaced short palindromic repeats)
associated proteins, conferring resistance to infection
by certain bacteriophages.
Length = 77
Score = 27.5 bits (62), Expect = 1.7
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 8/45 (17%)
Query: 199 DITVDTVVPLFKKHFE--------SVFECECSEVELDEEIKHLNS 235
DI D K + SVFE E +E +L + K L
Sbjct: 8 DIKEDKRRRKVAKLLKKYGQRVQYSVFEGELTEAQLAKLKKRLKK 52
>gnl|CDD|224262 COG1343, COG1343, CRISPR-associated protein Cas2 [Defense
mechanisms].
Length = 89
Score = 27.6 bits (62), Expect = 2.0
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 10/43 (23%)
Query: 199 DITVD----TVVPLFKKHF-----ESVFECECSEVELDEEIKH 232
DI+ D V K SVFE E + +L E++K
Sbjct: 8 DISDDGERVRKVAKLLKRGLQRVQNSVFEGELTPADL-EKLKR 49
>gnl|CDD|173491 PTZ00246, PTZ00246, proteasome subunit alpha; Provisional.
Length = 253
Score = 27.9 bits (62), Expect = 4.9
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 113 VQSIEQTVIQLC--KQEFSLNAGLIP 136
Q +EQ V+Q+C KQ ++ GL P
Sbjct: 104 PQPVEQLVVQICDLKQSYTQFGGLRP 129
>gnl|CDD|193533 cd05657, M42_glucanase_like, M42 Peptidase, Endoglucanase-like
subfamily. Peptidase M42 family, glucanase (endo-1
4-beta-glucanase or endoglucanase)-like subfamily.
Proteins in this subfamily are co-catalytic
metallopeptidases, found in archaea and bacteria. They
show similarity to cellulase and
endo-1,4-beta-glucanase (endoglucanase) which typically
bind two zinc or cobalt atoms. Some of the enzymes
exhibit typical aminopeptidase specificity, whereas
others are also capable of N-terminal deblocking
activity, i.e. hydrolyzing acylated N-terminal
residues. Many of these enzymes are assembled either as
tetrahedral dodecamers or as octahedral tetracosameric
structures, with the active site located on the inside
such that substrate sizes are limited, indicating
function as possible peptide scavengers.
Length = 336
Score = 27.5 bits (62), Expect = 7.3
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 26 VNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNRGGL 85
++ LK L++ PS SG YT E E +E +L LG + TN+G L
Sbjct: 3 LDVLKELLNIPSP-SG----------YT------DEAVEYVEKELEALGYEPELTNKGAL 45
Query: 86 I-TFHGPGQ 93
I T G
Sbjct: 46 IATLPGKDD 54
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.137 0.411
Gapped
Lambda K H
0.267 0.0752 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 11,715,286
Number of extensions: 1083287
Number of successful extensions: 837
Number of sequences better than 10.0: 1
Number of HSP's gapped: 814
Number of HSP's successfully gapped: 27
Length of query: 235
Length of database: 10,937,602
Length adjustment: 94
Effective length of query: 141
Effective length of database: 6,768,326
Effective search space: 954333966
Effective search space used: 954333966
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (25.7 bits)