BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6496
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q503Y7|PIN4_DANRE Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Danio
rerio GN=pin4 PE=2 SV=1
Length = 128
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/108 (76%), Positives = 95/108 (87%)
Query: 15 EEDSSGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQGGDLG 74
+ D K +KGGTAVKVRHILCEK K +EA+EK+KSG++F EVA+QYSEDKARQGGDLG
Sbjct: 21 DSDKKEKAQKGGTAVKVRHILCEKHGKCMEAMEKIKSGMRFSEVAAQYSEDKARQGGDLG 80
Query: 75 WMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
WM RGSMVG FQDAAF LPIST++ PVYT+PP+KTKFGYHIIMVEGKK
Sbjct: 81 WMTRGSMVGPFQDAAFALPISTMDKPVYTDPPVKTKFGYHIIMVEGKK 128
>sp|Q6P4K8|PIN4_XENTR Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Xenopus
tropicalis GN=pin4 PE=2 SV=1
Length = 127
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 82/106 (77%), Positives = 93/106 (87%)
Query: 17 DSSGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQGGDLGWM 76
D + KGG AVKVRHILCEK KV+EA+EKLKSGV+F EVA+QYSEDKARQGGDLGWM
Sbjct: 22 DKKAQTPKGGNAVKVRHILCEKHGKVMEAMEKLKSGVRFSEVATQYSEDKARQGGDLGWM 81
Query: 77 VRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
RGSMVG FQDAAF LP+ST++ PVYT+PP+KTKFGYHIIMVEG+K
Sbjct: 82 TRGSMVGPFQDAAFALPVSTMDKPVYTDPPVKTKFGYHIIMVEGRK 127
>sp|A6QPY8|PIN4_BOVIN Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Bos
taurus GN=PIN4 PE=2 SV=1
Length = 131
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 90/100 (90%)
Query: 23 KKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQGGDLGWMVRGSMV 82
K GG AVKVRHILCEK K+LEA+EKLKSG+KF EVA+QYSEDKARQGGDLGWM RGSMV
Sbjct: 32 KGGGNAVKVRHILCEKHGKILEAMEKLKSGMKFNEVAAQYSEDKARQGGDLGWMTRGSMV 91
Query: 83 GEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
G FQ+AAF LPIS ++ PV+T+PP+KTKFGYHIIMVEG+K
Sbjct: 92 GPFQEAAFALPISVLDKPVFTDPPVKTKFGYHIIMVEGRK 131
>sp|Q9CWW6|PIN4_MOUSE Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Mus
musculus GN=Pin4 PE=2 SV=1
Length = 131
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 93/110 (84%)
Query: 13 DKEEDSSGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQGGD 72
D + S K GG AVKVRHILCEK K++EA+EKLKSG++F EVA+QYSEDKARQGGD
Sbjct: 22 DSADKKSQGPKGGGNAVKVRHILCEKHGKIMEAMEKLKSGMRFSEVATQYSEDKARQGGD 81
Query: 73 LGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
LGWM RGSMVG FQ+AAF LP+S ++ PV+T+PP+KTKFGYHIIMVEG+K
Sbjct: 82 LGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMVEGRK 131
>sp|B5KFL3|PIN4_TAEGU Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
OS=Taeniopygia guttata GN=PIN4 PE=2 SV=1
Length = 128
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 90/100 (90%)
Query: 23 KKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQGGDLGWMVRGSMV 82
K GG+AVKVRHILCEK + +EA+EKLKSG +F EVA+QYSEDKARQGGDLGWM RGSMV
Sbjct: 29 KGGGSAVKVRHILCEKHGRAMEAMEKLKSGQRFSEVAAQYSEDKARQGGDLGWMTRGSMV 88
Query: 83 GEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
G FQ+AAF LP+S+++ PVYT+PP+KTKFGYHIIMVEG+K
Sbjct: 89 GPFQEAAFALPVSSMDKPVYTDPPVKTKFGYHIIMVEGRK 128
>sp|Q9Y237|PIN4_HUMAN Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Homo
sapiens GN=PIN4 PE=1 SV=1
Length = 131
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 90/100 (90%)
Query: 23 KKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQGGDLGWMVRGSMV 82
K GG AVKVRHILCEK K++EA+EKLKSG++F EVA+QYSEDKARQGGDLGWM RGSMV
Sbjct: 32 KGGGNAVKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYSEDKARQGGDLGWMTRGSMV 91
Query: 83 GEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
G FQ+AAF LP+S ++ PV+T+PP+KTKFGYHIIMVEG+K
Sbjct: 92 GPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMVEGRK 131
>sp|Q4WJM6|PIN4_ASPFU Peptidyl-prolyl cis-trans isomerase pin4 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=pin4 PE=3 SV=1
Length = 129
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 75/97 (77%), Gaps = 2/97 (2%)
Query: 26 GTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQGGDLGWMVRGSMVGEF 85
T++ VRHILCEK SK EALEKL++G KF +VA +YSEDKARQGG LGW VRGS+ +F
Sbjct: 35 ATSINVRHILCEKFSKKEEALEKLRNGAKFDDVAREYSEDKARQGGSLGWKVRGSLNADF 94
Query: 86 QDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
+ AA++L ST NP Y E +KT FGYHIIMVEG+K
Sbjct: 95 EKAAYELEPSTTANPKYVE--VKTGFGYHIIMVEGRK 129
>sp|Q4I665|PIN4_GIBZE Peptidyl-prolyl cis-trans isomerase PIN4 OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PIN4
PE=3 SV=2
Length = 133
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Query: 19 SGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQGGDLGWMVR 78
SG + KG ++ VRHILCEK +K EAL KL GVKF EVA +YSEDKARQGG LGW +
Sbjct: 32 SGGKAKGAQSINVRHILCEKHAKKEEALAKLNDGVKFDEVAREYSEDKARQGGSLGWKTK 91
Query: 79 GSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
GS+ +F++ AF L ST N+P + E +KT FGYHIIMVEG+K
Sbjct: 92 GSLDPKFEEVAFALETSTTNSPKFVE--VKTGFGYHIIMVEGRK 133
>sp|Q5B5W1|PIN4_EMENI Peptidyl-prolyl cis-trans isomerase pin4 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=pin4 PE=3 SV=1
Length = 128
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 4/121 (3%)
Query: 2 GPKKGSGKSSKDKEEDSSGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQ 61
G KK K+ D ++DS GK K G +V VRHILCEK SK EALEK+++G KF EVA +
Sbjct: 12 GDKKSKAKAG-DAKDDSKGKMK-GAQSVNVRHILCEKFSKKEEALEKIRNGAKFDEVARE 69
Query: 62 YSEDKARQGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGK 121
YSEDKARQGG LGW +G + F++ AF L ST NP E KT +GYHIIMVEG+
Sbjct: 70 YSEDKARQGGSLGWKSKGELELPFEEVAFSLEQSTTGNPKIGEA--KTGYGYHIIMVEGR 127
Query: 122 K 122
K
Sbjct: 128 K 128
>sp|Q7RYY4|PIN4_NEUCR Peptidyl-prolyl cis-trans isomerase pin-4 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=pin-4 PE=3 SV=1
Length = 130
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 11 SKDKEEDSSGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQG 70
+KD +D+ GK KG ++ VRHILCEK K EAL K++ G F VA +YSEDKAR G
Sbjct: 22 NKDAGKDA-GKASKGAQSINVRHILCEKHGKKEEALAKIRDGADFGAVAREYSEDKARTG 80
Query: 71 GDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
G LGW +G++ EF+ AF L S+ ++P E +KT+FGYHIIMVEGKK
Sbjct: 81 GSLGWKQKGTLDPEFEKVAFALETSSTSSPKIGE--VKTQFGYHIIMVEGKK 130
>sp|Q9KDN4|PRSA_BACHD Foldase protein PrsA OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=prsA PE=3
SV=1
Length = 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQG--GDLGWMVRGSMVGEFQ 86
V+ HIL E + E L++L++G F E+AS+YS D + + GDLG+ +G MV EF+
Sbjct: 158 VEASHILVEDEETAEEVLDRLEAGDDFAELASEYSVDPSAEANNGDLGFFGKGDMVPEFE 217
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
+AAF + I V+ PV ++ +GYHII+V +K
Sbjct: 218 EAAFNMEIDEVSEPV------ESTYGYHIILVTDRK 247
>sp|A4IKU2|PRSA_GEOTN Foldase protein PrsA OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=prsA PE=3 SV=1
Length = 278
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSED--KARQGGDLGWMVRGSMVGEFQ 86
V+ HIL E + E KL G F ++A +YS+D A GGDLGW G MV EF+
Sbjct: 136 VRASHILVEDEKTAKEVKAKLDKGEDFAKLAKEYSQDPGSASNGGDLGWFGAGKMVKEFE 195
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGK 121
+AA+KL + V++ PIKT +GYHII V K
Sbjct: 196 EAAYKLKVGEVSD------PIKTDYGYHIIKVTDK 224
>sp|Q8CXK4|PRSA_OCEIH Foldase protein PrsA OS=Oceanobacillus iheyensis (strain DSM 14371
/ JCM 11309 / KCTC 3954 / HTE831) GN=prsA PE=3 SV=1
Length = 299
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 1 MGPKKGSGKSSKDKEEDSSGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVAS 60
M +K + + + EED ++ T ++ +HIL E + V E +K++ G F E+A
Sbjct: 112 MLQEKAAAEDVEITEEDLQELYERKNTEIQAQHILLENEEDVAEVQQKIEDGEDFGELAQ 171
Query: 61 QYSED--KARQGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMV 118
+YS D A GGDLG+ GSMV EF++AAF L +++PV ++ G HII V
Sbjct: 172 EYSTDTGSAENGGDLGYFSAGSMVPEFEEAAFSLEAGEISDPV------QSTHGTHIIKV 225
>sp|C5D6L9|PRSA_GEOSW Foldase protein PrsA OS=Geobacillus sp. (strain WCH70) GN=prsA PE=3
SV=1
Length = 276
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSED--KARQGGDLGWMVRGSMVGEFQ 86
++ HIL + + E KL G F ++A QYS+D A GGDLGW G MV EF+
Sbjct: 136 IRASHILVKDEKTAEEIKTKLDKGEDFAKLAKQYSQDPGSAPNGGDLGWFGPGKMVKEFE 195
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGK 121
DAA+KL + V++PV KT +GYHII V K
Sbjct: 196 DAAYKLKVGQVSDPV------KTDYGYHIIKVTDK 224
>sp|Q81GY5|PRSA1_BACCR Foldase protein PrsA 1 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA1 PE=3 SV=1
Length = 286
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKA--RQGGDLGWMVRGSMVGEFQ 86
+K HIL + ++ + E+L G F E+A QYSED +GGDLG+ G MV EF+
Sbjct: 133 IKASHILVKDEATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVKEFE 192
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMV 118
DAA+KL V+ PV K++FGYHII V
Sbjct: 193 DAAYKLKKDEVSEPV------KSQFGYHIIKV 218
>sp|Q5L289|PRSA_GEOKA Foldase protein PrsA OS=Geobacillus kaustophilus (strain HTA426)
GN=prsA PE=3 SV=1
Length = 281
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSED--KARQGGDLGWMVRGSMVGEFQ 86
++ HIL + + E KL G F ++A +YS+D A GGDLGW G MV EF+
Sbjct: 136 IRASHILVKDEKTAKEVKAKLDKGEDFSKLAKEYSQDPGSASNGGDLGWFGPGKMVKEFE 195
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGK 121
+AA+KL + V++PV KT +GYHII V K
Sbjct: 196 EAAYKLKVGEVSDPV------KTDYGYHIIKVTDK 224
>sp|Q81U45|PRSA1_BACAN Foldase protein PrsA 1 OS=Bacillus anthracis GN=prsA1 PE=1 SV=1
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKA--RQGGDLGWMVRGSMVGEFQ 86
+K HIL + ++ + E+L G F E+A QYSED +GGDLG+ G MV EF+
Sbjct: 133 IKASHILVKDEATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFE 192
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMV 118
DAA+KL V+ PV K++FGYHII V
Sbjct: 193 DAAYKLKKDEVSEPV------KSQFGYHIIKV 218
>sp|P24327|PRSA_BACSU Foldase protein PrsA OS=Bacillus subtilis (strain 168) GN=prsA PE=1
SV=1
Length = 292
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSED-KARQGGDLGWMVR-GSMVGEFQ 86
++ HIL + E +KLK G KF ++A +YS D A +GGDLGW + G M F
Sbjct: 137 IRASHILVADKKTAEEVEKKLKKGEKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFS 196
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHII 116
AAFKL V++PV KT++GYHII
Sbjct: 197 KAAFKLKTGEVSDPV------KTQYGYHII 220
>sp|Q81CB1|PRSA4_BACCR Foldase protein PrsA 4 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA4 PE=3 SV=1
Length = 280
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSED--KARQGGDLGWMVRGSMVGEFQ 86
++V HIL + + E EKL SG F +A QYSED +GG+L G MV EF+
Sbjct: 135 LQVSHILVKDEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 194
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
DAA+KL + ++ PV K+ FGYHII + KK
Sbjct: 195 DAAYKLEVGQLSEPV------KSSFGYHIIKLTDKK 224
>sp|Q7NQB0|SURA_CHRVO Chaperone SurA OS=Chromobacterium violaceum (strain ATCC 12472 /
DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC
9757) GN=surA PE=3 SV=1
Length = 429
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 21/116 (18%)
Query: 22 QKKGGTAVKV-----RHILCEKQSKVLEA---------LEKLKSGVKFPEVASQYSEDKA 67
++ GG + V RHIL V EA +++ G KF ++A YSED +
Sbjct: 274 KRSGGAPMMVEQYHPRHILIRTNEAVSEADAKARIDQVRDRIMRGAKFADMAKLYSEDGS 333
Query: 68 R-QGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
+GGDLGW+ G +V EF+ A LPI V+ PV +T FG+H+I+VEGK+
Sbjct: 334 NAKGGDLGWVNMGDLVPEFEKAMVSLPIGQVSQPV------RTPFGWHLILVEGKR 383
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 41 KVLEALEKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEF 85
KV +A L +G F +V++ YS+ A +GGD+GW S+ EF
Sbjct: 199 KVHKAQADLAAGQPFAKVSAAYSDAPNALKGGDMGWRSATSLPQEF 244
>sp|Q81TU1|PRSA2_BACAN Foldase protein PrsA 2 OS=Bacillus anthracis GN=prsA2 PE=1 SV=1
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSED--KARQGGDLGWMVRGSMVGEFQ 86
+K HIL +++ E +KL +G F E+A Q S+D +GGDLG+ G+M EF+
Sbjct: 137 IKASHILVSDENEAKEIKKKLDTGASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFE 196
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
AA+KL I +++PV ++ GYHII + GKK
Sbjct: 197 TAAYKLKIGQISDPV------QSPNGYHIIKLTGKK 226
>sp|Q81DT1|PRSA3_BACCR Foldase protein PrsA 3 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA3 PE=3 SV=1
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKA--RQGGDLGWMVRGSMVGEFQ 86
+KV HIL + + E EK+ +G F +A+QYSED QGG++ G V EF+
Sbjct: 135 MKVSHILVKDEKTAKEIKEKVNNGEDFAALANQYSEDTGSKEQGGEISGFAPGQTVKEFE 194
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
+AA+KL V++PV KT +GYHII V KK
Sbjct: 195 EAAYKLDAGQVSDPV------KTTYGYHIIKVTDKK 224
>sp|Q81GN0|PRSA2_BACCR Foldase protein PrsA 2 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA2 PE=3 SV=1
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSED--KARQGGDLGWMVRGSMVGEFQ 86
+K HIL +++ E KL +G F E+A Q S+D +GGDLG+ G+M EF+
Sbjct: 137 IKASHILVSDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFE 196
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
AA+KL + ++NPV K+ GYH+I + KK
Sbjct: 197 TAAYKLNVGQISNPV------KSSNGYHVIKLTDKK 226
>sp|B1YK87|PRSA_EXIS2 Foldase protein PrsA OS=Exiguobacterium sibiricum (strain DSM 17290
/ JCM 13490 / 255-15) GN=prsA PE=3 SV=1
Length = 304
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 13 DKEEDSSGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSED--KARQG 70
DKE + Q+K VK HIL EK+S+ ++L G F ++A S D A +G
Sbjct: 129 DKEIEDRFNQEK--VEVKASHILVEKESEAKAIKKQLDEGGDFAKIAKAKSTDTGSATKG 186
Query: 71 GDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
GDLG+ +G MV EF++ AFK + PIKT+FGYHII V +K
Sbjct: 187 GDLGYFTKGKMVEEFENYAFKDGVEG-----KISDPIKTQFGYHIIKVTDRK 233
>sp|Q81QT1|PRSA3_BACAN Foldase protein PrsA 3 OS=Bacillus anthracis GN=prsA3 PE=1 SV=2
Length = 283
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKA--RQGGDLGWMVRGSMVGEFQ 86
+KV HIL + + E EK+ +G F +A QYSED QGG++ G V EF+
Sbjct: 135 MKVSHILVKDEKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 194
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
+AA+KL V+ PV KT +GYHII V KK
Sbjct: 195 EAAYKLDAGQVSEPV------KTTYGYHIIKVTDKK 224
>sp|Q8R760|PRSA_THETN Foldase protein PrsA OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=prsA PE=3
SV=1
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 22 QKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQ--GGDLGWMVRG 79
K+ ++ RHIL + + ++L G F +A +YS D A + GGDLG G
Sbjct: 161 HKESFEVMRARHILVADEKTAEDIYQRLMKGEDFAALAKEYSIDTATKDNGGDLGEFPHG 220
Query: 80 SMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEG 120
MV EF++AAF L + ++ PV KT++GYHII EG
Sbjct: 221 VMVPEFEEAAFSLKLGEISKPV------KTQYGYHIIKSEG 255
>sp|A1VYV6|CBF2_CAMJJ Putative peptidyl-prolyl cis-trans isomerase Cbf2 OS=Campylobacter
jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
GN=cbf2 PE=4 SV=1
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Query: 29 VKVRHILC--EKQSK-VLEALEKLKS---GVKFPEVASQYSED--KARQGGDLGWMVRGS 80
V+ +HIL EK++K ++ L+ LK KF E+A + S D QGG+LGW + +
Sbjct: 134 VQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGELGWFDQST 193
Query: 81 MVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEG 120
MV F DAAF L T+ T P+KT FGYH+I+ E
Sbjct: 194 MVKPFTDAAFALKNGTI-----TTTPVKTNFGYHVILKEN 228
>sp|Q0PAS1|CBF2_CAMJE Putative peptidyl-prolyl cis-trans isomerase Cbf2 OS=Campylobacter
jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)
GN=cbf2 PE=1 SV=1
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Query: 29 VKVRHILC--EKQSK-VLEALEKLKS---GVKFPEVASQYSED--KARQGGDLGWMVRGS 80
V+ +HIL EK++K ++ L+ LK KF E+A + S D QGG+LGW + +
Sbjct: 134 VQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGELGWFDQST 193
Query: 81 MVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEG 120
MV F DAAF L T+ T P+KT FGYH+I+ E
Sbjct: 194 MVKPFTDAAFALKNGTI-----TTTPVKTNFGYHVILKEN 228
>sp|Q1QZ33|SURA_CHRSD Chaperone SurA OS=Chromohalobacter salexigens (strain DSM 3043 /
ATCC BAA-138 / NCIMB 13768) GN=surA PE=3 SV=1
Length = 435
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 17/114 (14%)
Query: 20 GKQKKGGTAVKVRHILC----EKQSKVLEAL-----EKLKSGVKFPEVASQYSED--KAR 68
G+QK+ T +VRHIL + + EAL +++ +G F +A +YS+D A
Sbjct: 280 GEQKRVVTENRVRHILIGTNPNRNDQQAEALARDIRQRIANGESFAALAQEYSDDDGSAL 339
Query: 69 QGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
GG+LGW G MV F+DA L + ++ PV +++FGYH+I +E ++
Sbjct: 340 DGGELGWTRPGQMVPAFEDAVKALDVGELSQPV------RSRFGYHVIELEDRR 387
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 37 EKQSKVLEALEKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEFQDAAFKLPIS 95
+ Q+KV + +L++G F ++A+ S+ +A GGDLGW + F D +
Sbjct: 196 QAQAKVRDLYRQLQNGANFAQLATAESDGQQALSGGDLGWRRGDQLPSLFADV-----VP 250
Query: 96 TVNNPVYTEPPIKTKFGYHII 116
T++N +E PI++ G+H++
Sbjct: 251 TLSNGEVSE-PIRSPSGFHLV 270
>sp|Q68WG0|PLP_RICTY Parvulin-like PPIase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=plp PE=3 SV=2
Length = 282
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 13 DKEEDSSGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKAR--QG 70
D E + KG +KV HIL + Q + KL G F ++A ++S DKA G
Sbjct: 125 DDEYNKYVDNLKGKEQIKVAHILVKSQKEANTVKTKLSKGGNFNKLAEEFSLDKATASNG 184
Query: 71 GDLGWMV---RGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
G +G+++ G +V EF++ AF L ++ V+ PV KT FG+HII V KK
Sbjct: 185 GVIGYIILNQSGQLVPEFENKAFALKVNEVSTPV------KTDFGWHIIKVLEKK 233
>sp|Q1GZC0|SURA_METFK Chaperone SurA OS=Methylobacillus flagellatus (strain KT / ATCC
51484 / DSM 6875) GN=surA PE=3 SV=1
Length = 437
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 23 KKGGTA------VKVRHILC---------EKQSKVLEALEKLKSGVKFPEVASQYSED-K 66
++GG++ VRHIL E + K+ E+L G F E+A QYSED
Sbjct: 281 RRGGSSPLVVDQTHVRHILIKLSEVVSELEAEQKINSIKERLDHGADFAELARQYSEDAS 340
Query: 67 ARQGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMV 118
A GGDLGW G V F+ A L I+ ++ PV +T FG+HII V
Sbjct: 341 ANNGGDLGWTNAGDTVPAFEKAMNALDINEISAPV------RTPFGWHIIQV 386
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 39 QSKVLEALEKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEFQDAAFKLPISTV 97
++K AL++L+SG F +V++ YS+ A +GG LGW + F DA L
Sbjct: 204 KAKAEAALKELQSGADFAQVSAGYSDAPNALEGGILGWKASSQLPSLFVDALQAL----- 258
Query: 98 NNPVYTEPPIKTKFGYHIIMVEGKK 122
P P +++ GYHI+ + ++
Sbjct: 259 -QPGQLSPVLRSPNGYHILKLLNRR 282
>sp|Q9ZCX6|PLP_RICPR Parvulin-like PPIase OS=Rickettsia prowazekii (strain Madrid E)
GN=plp PE=3 SV=1
Length = 282
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 13 DKEEDSSGKQKKGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKAR--QG 70
D E + KG +KV HIL + Q + KL G F ++A ++S DKA G
Sbjct: 125 DDEYNKYVDNLKGKEQIKVAHILVKSQKEANTVKTKLSKGGNFTKLAEEFSLDKATASNG 184
Query: 71 GDLGWMVR---GSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
G +G+++ G +V EF+ AF L ++ V+ PV KT FG+HII V KK
Sbjct: 185 GIIGYIILNQPGQLVPEFEQKAFALKVNEVSTPV------KTSFGWHIIKVLEKK 233
>sp|Q929F4|PRSA2_LISIN Foldase protein PrsA 2 OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=prsA2 PE=3 SV=1
Length = 291
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKA--RQGGDLGWMVRGSMVGEFQ 86
+ V HIL ++K E +KLK G KF ++A +YS D A GG L G M F+
Sbjct: 138 ITVSHILVADENKAKEVEQKLKDGAKFADLAKEYSTDTATKENGGQLAPFGSGKMDPAFE 197
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVE 119
AA+ L N P+KT++GYHII ++
Sbjct: 198 KAAYALK-----NKGDISAPVKTQYGYHIIQMD 225
>sp|Q5WZN0|SURA_LEGPL Chaperone SurA OS=Legionella pneumophila (strain Lens) GN=surA PE=3
SV=1
Length = 429
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 17/112 (15%)
Query: 22 QKKGGTAVKVRHILCEKQSKVL--EALEK-------LKSGVKFPEVASQYSEDKAR--QG 70
Q+ T VRHIL + + ++ EA+++ ++SG F +A QYS D A +G
Sbjct: 277 QRHVITQTHVRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQYSLDAASAVKG 336
Query: 71 GDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
GDLGW+ G +V EF+ LP+ V+ PV KT++G+H+I V ++
Sbjct: 337 GDLGWVNPGELVPEFEKTMNSLPLHKVSKPV------KTQYGWHLIEVIARR 382
>sp|Q5X877|SURA_LEGPA Chaperone SurA OS=Legionella pneumophila (strain Paris) GN=surA
PE=3 SV=1
Length = 429
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 17/112 (15%)
Query: 22 QKKGGTAVKVRHILCEKQSKVL--EALEK-------LKSGVKFPEVASQYSEDKAR--QG 70
Q+ T VRHIL + + ++ EA+++ ++SG F +A QYS D A +G
Sbjct: 277 QRHVITQTHVRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQYSLDAASAVKG 336
Query: 71 GDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
GDLGW+ G +V EF+ LP+ V+ PV KT++G+H+I V ++
Sbjct: 337 GDLGWVNPGELVPEFEKTMNSLPLHKVSKPV------KTQYGWHLIEVIARR 382
>sp|Q5ZYR3|SURA_LEGPH Chaperone SurA OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=surA PE=3
SV=2
Length = 429
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 17/112 (15%)
Query: 22 QKKGGTAVKVRHILCEKQSKVL--EALEK-------LKSGVKFPEVASQYSEDKAR--QG 70
Q+ T VRHIL + + ++ EA+++ ++SG F +A QYS D A +G
Sbjct: 277 QRHVITQTHVRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQYSLDAASAVKG 336
Query: 71 GDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
GDLGW+ G +V EF+ LP+ V+ PV KT++G+H+I V ++
Sbjct: 337 GDLGWVNPGELVPEFEKTMNSLPLHKVSKPV------KTQYGWHLIEVIARR 382
>sp|Q92H91|PLP_RICCN Parvulin-like PPIase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=plp PE=3 SV=1
Length = 282
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 24 KGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDK--ARQGGDLGWMVR--- 78
KG +KV HIL + Q + + KL G F ++A + S DK A GG +G+++
Sbjct: 136 KGKEQIKVAHILVKSQKEANDIKTKLSKGGNFTKLAEELSLDKASASNGGVIGYILLNQP 195
Query: 79 GSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
G +V EF+ AF L ++ V+ PV KT FG+HII V KK
Sbjct: 196 GQLVPEFEKKAFALKVNEVSTPV------KTDFGWHIIKVLEKK 233
>sp|Q71XE6|PRSA2_LISMF Foldase protein PrsA 2 OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=prsA2 PE=3 SV=1
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQ--GGDLGWMVRGSMVGEFQ 86
+ V HIL ++K E +KLK G KF ++A +YS D A + GG L G M F+
Sbjct: 138 ITVSHILVADENKAKEVEQKLKDGAKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFE 197
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVE 119
AA+ L N P+KT++GYHII ++
Sbjct: 198 KAAYAL-----KNKGDISAPVKTQYGYHIIQMD 225
>sp|Q1RI35|PLP_RICBR Parvulin-like PPIase OS=Rickettsia bellii (strain RML369-C) GN=plp
PE=3 SV=1
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 24 KGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDK--ARQGGDLGWMVR--- 78
KG +KV HIL + + + + KL G F ++A + S DK A GG +G+++
Sbjct: 137 KGKEQIKVAHILVKSEKEANDLKNKLNKGADFAKLAGESSLDKASATNGGVIGYILLNQP 196
Query: 79 GSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
G +V EF++ AF L ++ V+ PV KT +G+HII V KK
Sbjct: 197 GQLVPEFENKAFALKVNEVSTPV------KTDYGWHIIKVLEKK 234
>sp|Q63X78|SURA_BURPS Chaperone SurA OS=Burkholderia pseudomallei (strain K96243) GN=surA
PE=3 SV=2
Length = 448
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 31 VRHIL---------CEKQSKVLEALEKLKSGVKFPEVASQYSED-KARQGGDLGWMVRGS 80
VRHIL + + ++++ +++SG F + A YS+D A QGGDLGW+ G
Sbjct: 306 VRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTYSQDGSASQGGDLGWISPGE 365
Query: 81 MVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
V EF+ A L V+NPV TE +GYH+I V G++
Sbjct: 366 TVPEFERAMNTLQDGQVSNPVRTE------YGYHLIQVLGRR 401
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 47 EKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEP 105
+ L SG F +A SE D A++GGDLG+ S+ + DA KL VN + P
Sbjct: 219 QALASGANFERLAKNQSEADDAKKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVP 278
>sp|Q3JVW8|SURA_BURP1 Chaperone SurA OS=Burkholderia pseudomallei (strain 1710b) GN=surA
PE=3 SV=1
Length = 448
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 31 VRHIL---------CEKQSKVLEALEKLKSGVKFPEVASQYSED-KARQGGDLGWMVRGS 80
VRHIL + + ++++ +++SG F + A YS+D A QGGDLGW+ G
Sbjct: 306 VRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTYSQDGSASQGGDLGWISPGE 365
Query: 81 MVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
V EF+ A L V+NPV TE +GYH+I V G++
Sbjct: 366 TVPEFERAMNTLQDGQVSNPVRTE------YGYHLIQVLGRR 401
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 47 EKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEP 105
+ L SG F +A SE D A++GGDLG+ S+ + DA KL VN + P
Sbjct: 219 QALASGANFERLAKNQSEADDAKKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVP 278
>sp|Q82W17|SURA_NITEU Chaperone SurA OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC
14298) GN=surA PE=3 SV=1
Length = 448
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 29 VKVRHILCEKQSKVL--EALEKLKSGVKFPEVASQYSED-KARQGGDLGWMVRGSMVGEF 85
+KV ++ E+ + L + +E++ +G F +VA +SED A GGDLGW+ G V EF
Sbjct: 312 IKVSELVSEEDAHQLINQLMERIHNGADFMDVAKAHSEDASASAGGDLGWVSPGDTVPEF 371
Query: 86 QDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMV 118
+ A L P PP++T FG+H+I V
Sbjct: 372 EQAMNALL------PGQVSPPVRTPFGWHLIKV 398
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 38 KQSKVLEALEKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEFQDAAFKLPIST 96
+ + A E L+ G F V++++S+ A QGG+LGW G + F + +
Sbjct: 214 RHKRAETAYESLRQGADFVRVSAEFSDAPDAMQGGELGWRPLGQLGSPFTEMLVNM---- 269
Query: 97 VNNPVYTEPPIKTKFGYHII 116
P P +++ G+HI+
Sbjct: 270 --QPGEVTPVVRSPVGFHIL 287
>sp|Q5P7I9|SURA_AROAE Chaperone SurA OS=Aromatoleum aromaticum (strain EbN1) GN=surA PE=3
SV=2
Length = 439
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 24/118 (20%)
Query: 23 KKGGTA--------VKVRHIL---------CEKQSKVLEALEKLKSGVKFPEVASQYSED 65
++GG A + RHIL E +S++L E++ +G F E+A +S D
Sbjct: 282 RRGGAAAGPQQLEQTRARHILIRTSEILNDSEAESRLLGLRERVVNGASFAELAKAHSAD 341
Query: 66 -KARQGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
+ +GGDLGW+ G V EF+ L P P+++ FG+H+I VE ++
Sbjct: 342 LSSAKGGDLGWLSPGDTVPEFERTMNAL------KPGEVSAPVRSPFGWHLIQVEARR 393
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 45 ALEKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYT 103
A ++L SG F VA+ YS+ A GG LGW R + F +A +L +P
Sbjct: 211 AKQRLNSGDDFARVAASYSDAPDAMNGGALGWRSRDRLPPLFAEAVREL------SPGSV 264
Query: 104 EPPIKTKFGYHII 116
P +++ G HI+
Sbjct: 265 SPVLRSSAGLHIV 277
>sp|Q8Y557|PRSA2_LISMO Foldase protein PrsA 2 OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=prsA2 PE=3 SV=1
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 29 VKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDKARQ--GGDLGWMVRGSMVGEFQ 86
+ V HIL ++K E +KLK G KF ++A +YS D A + GG L G M F+
Sbjct: 138 ITVSHILVADENKAKEVEQKLKDGEKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFE 197
Query: 87 DAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVE 119
AA+ L N P+KT++GYHII ++
Sbjct: 198 KAAYAL-----KNKGDISAPVKTQYGYHIIQMD 225
>sp|Q4UKY0|PLP_RICFE Parvulin-like PPIase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=plp PE=3 SV=1
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 24 KGGTAVKVRHILCEKQSKVLEALEKLKSGVKFPEVASQYSEDK--ARQGGDLGWMVR--- 78
KG +KV HIL + Q + KL G F ++A + S DK A GG +G+++
Sbjct: 136 KGKEQIKVAHILVKSQKEANNIKTKLSKGGNFTKLAEESSLDKASASNGGVIGYILLNQP 195
Query: 79 GSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
G +V EF+ AF L ++ V+ PV KT FG+HII V KK
Sbjct: 196 GQLVPEFEKKAFALKVNEVSTPV------KTDFGWHIIKVLEKK 233
>sp|Q7WCX5|PLP1_BORBR Probable parvulin-type peptidyl-prolyl cis-trans isomerase
OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC
13252 / RB50) GN=BB3803 PE=3 SV=1
Length = 258
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 21 KQKKGGTAVKVRHILCEKQSKVLEALEKLKSG-VKFPEVASQYSED--KARQGGDLGWMV 77
K++ G KVRHIL E + + L ++KS KF ++A + S+D A +GGDLGW
Sbjct: 122 KEQAGKMEYKVRHILVEDEKTANDLLAQVKSNKSKFDDLAKKNSKDPGSAERGGDLGWAP 181
Query: 78 RGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
+ V F +A KL + + P++T+FG+H+I V+ +
Sbjct: 182 ATNYVQPFAEAVTKLKKGQL-----VDKPVQTQFGWHVIQVDDTR 221
>sp|Q62MM4|SURA_BURMA Chaperone SurA OS=Burkholderia mallei (strain ATCC 23344) GN=surA
PE=3 SV=1
Length = 448
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 31 VRHIL---------CEKQSKVLEALEKLKSGVKFPEVASQYSED-KARQGGDLGWMVRGS 80
VRHIL + + ++++ +++SG F + A YS+D A QGGDLGW+ G
Sbjct: 306 VRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTYSQDGSASQGGDLGWISPGE 365
Query: 81 MVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
V EF+ A L V+NPV TE +GYH+I V G++
Sbjct: 366 PVPEFERAMNTLQDGQVSNPVRTE------YGYHLIQVLGRR 401
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 47 EKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEP 105
+ L SG F +A SE D A++GGDLG+ S+ + DA KL VN + P
Sbjct: 219 QALASGANFERLAKNQSEADDAKKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVP 278
>sp|Q3SGF9|SURA_THIDA Chaperone SurA OS=Thiobacillus denitrificans (strain ATCC 25259)
GN=surA PE=3 SV=1
Length = 436
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 16/102 (15%)
Query: 27 TAVKVRHIL---------CEKQSKVLEALEKLKSGVKFPEVASQYSED-KARQGGDLGWM 76
T RHIL + ++++L+ E++ +GVKF E+A +SED A +GGDLGW+
Sbjct: 292 TQTHARHILIKTNEITSEADARNRLLQLKERIDNGVKFDELARLHSEDASASKGGDLGWI 351
Query: 77 VRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMV 118
G V +F+ A L P P+++ FG+H+I V
Sbjct: 352 NPGDTVPDFEKAMNAL------QPGEVSAPVQSPFGWHLIQV 387
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 37 EKQSKVLEALEKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEFQDAAFKLPIS 95
E++++ + L +L +G F ++++ +S+ A +GG+ GW G + F +A +
Sbjct: 203 ERRARAEDILAQLAAGADFAQLSASHSDAPDALKGGNFGWRASGKLPALFVEALKPM--- 259
Query: 96 TVNNPVYTEPPIKTKFGYHIIMVEGKK 122
P P +++ G+HI+ + K+
Sbjct: 260 ---QPGEISPLLRSGNGFHILKLVDKR 283
>sp|Q3JAF1|SURA_NITOC Chaperone SurA OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB
11848) GN=surA PE=3 SV=1
Length = 426
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 17/112 (15%)
Query: 22 QKKGGTAVKVRHILC---------EKQSKVLEALEKLKSGVKFPEVASQYSEDKAR--QG 70
Q++ T + RHIL E Q ++ + +++ SG F E+A +S+DKA +G
Sbjct: 276 QQQLVTQTQARHILLRADELASEREVQLRLSQLRQRILSGDDFSELAQAHSDDKASALKG 335
Query: 71 GDLGWMVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
GDLGW+ G M+ F++A L P P KT+FG+H++ V ++
Sbjct: 336 GDLGWVSPGQMIPRFEEAMRSL------EPGEISEPFKTQFGWHVVQVLDRR 381
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 39 QSKVLEALEKLKSGVKFPEVASQYSE-DKARQGGDLGWMVRGSMVGEFQDAAFKLPISTV 97
++K + L++L+ G F +VA YS+ +A +GGDLGW G + F D +L +
Sbjct: 194 KAKAEQVLQQLREGADFQKVAVTYSDGQQALEGGDLGWRKMGQLPTLFVDVVPQLQAGDI 253
Query: 98 NNPVYTEPPIKTKFGYHII 116
+ I++ G+HI+
Sbjct: 254 SK------LIRSPSGFHIV 266
>sp|P40415|PLP1_BORPE Probable parvulin-type peptidyl-prolyl cis-trans isomerase
OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589
/ NCTC 13251) GN=BP3561 PE=2 SV=2
Length = 258
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 21 KQKKGGTAVKVRHILCEKQSKVLEALEKLKSG-VKFPEVASQYSED--KARQGGDLGWMV 77
K++ G KVRHIL E + + L ++KS KF ++A + S+D A +GGDLGW
Sbjct: 122 KEQAGKMEYKVRHILVEDEKTANDLLAQVKSNKNKFDDLAKKNSKDPGSAERGGDLGWAP 181
Query: 78 RGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKK 122
+ V F +A KL + + P++T+FG+H+I V+ +
Sbjct: 182 ATNYVQPFAEAVTKLKKGQL-----VDKPVQTQFGWHVIQVDDTR 221
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,032,929
Number of Sequences: 539616
Number of extensions: 1799129
Number of successful extensions: 5285
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 4902
Number of HSP's gapped (non-prelim): 277
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)