BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6508
(477 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3M7N|D Chain D, Archaeoglobus Fulgidus Exosome With Rna Bound To The
Active Site
pdb|3M7N|E Chain E, Archaeoglobus Fulgidus Exosome With Rna Bound To The
Active Site
pdb|3M7N|F Chain F, Archaeoglobus Fulgidus Exosome With Rna Bound To The
Active Site
pdb|3M85|D Chain D, Archaeoglobus Fulgidus Exosome Y70a With Rna Bound To The
Active Site
pdb|3M85|E Chain E, Archaeoglobus Fulgidus Exosome Y70a With Rna Bound To The
Active Site
pdb|3M85|F Chain F, Archaeoglobus Fulgidus Exosome Y70a With Rna Bound To The
Active Site
Length = 258
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 23/194 (11%)
Query: 99 VCHFDLKPQNILI--------KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150
+ F+ KP+ +++ K + L+ ++ V ++A GS Y+E G KVI +VF PR
Sbjct: 1 MSEFNEKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPR 60
Query: 151 EI-P-----SSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEP 204
E+ P SK + Y+ + APF+ + R D E+ K A E
Sbjct: 61 EVHPEHLQDPSKAIIRYR---------YNMAPFSVEERKRPGPDRRSIEISKVSKEAFEA 111
Query: 205 AVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLT 264
+ + F +D+FV VLQ D + +A +N A++ALVDA +PM ++TS + G
Sbjct: 112 VIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQL 171
Query: 265 FIDPVEEEVAYCQS 278
+DP++EE + ++
Sbjct: 172 VLDPMKEEDNFGEA 185
>pdb|2BA0|F Chain F, Archaeal Exosome Core
pdb|2BA0|E Chain E, Archaeal Exosome Core
pdb|2BA0|D Chain D, Archaeal Exosome Core
pdb|2BA1|D Chain D, Archaeal Exosome Core
pdb|2BA1|E Chain E, Archaeal Exosome Core
pdb|2BA1|F Chain F, Archaeal Exosome Core
Length = 258
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 23/194 (11%)
Query: 99 VCHFDLKPQNILI--------KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150
+ F+ KP+ +++ K + L+ ++ V ++A GS Y+E G KVI +VF PR
Sbjct: 1 MSEFNEKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPR 60
Query: 151 EI-P-----SSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEP 204
E+ P SK + Y+ + APF+ + R D E+ K A E
Sbjct: 61 EVHPRHLQDPSKAIIRYR---------YNMAPFSVEERKRPGPDRRSIEISKVSKEAFEA 111
Query: 205 AVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLT 264
+ + F +D+FV VLQ D + +A +N A++ALVDA +PM ++TS + G
Sbjct: 112 VIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQL 171
Query: 265 FIDPVEEEVAYCQS 278
+DP++EE + ++
Sbjct: 172 VLDPMKEEDNFGEA 185
>pdb|2PNZ|A Chain A, Crystal Structure Of The P. Abyssi Exosome Rnase Ph Ring
Complexed With Udp And Gmp
pdb|2PO0|A Chain A, Crystal Structure Of The P. Abyssi Exosome Rnase Ph Ring
Complexed With Adp In Double Conformation
pdb|2PO1|A Chain A, Crystal Structure Of The P. Abyssi Exosome Rnase Ph Ring
Complexed With A Single Stranded 10-Mer Poly(A) Rna
pdb|2PO2|A Chain A, Crystal Structure Of The P. Abyssi Exosome Rnase Ph Ring
Complexed With Cdp
Length = 249
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 105 KPQNI-LIKNNTLKLAGLKQ----------GVSEKAKGSAYIEQGNTKVICSVFEPREI- 152
KP+ + LI N ++ G K+ GV + A GSAYIE G K+I +V+ PRE+
Sbjct: 4 KPEGLKLIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELH 63
Query: 153 PSSKTSLEYQRS-KGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEF 211
P QR + L V + APF+ + R D E+ +K ALEPA+ F
Sbjct: 64 PKH-----LQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMF 118
Query: 212 SNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEE 271
+D+F+ VLQ D A I A+LAL DA IPM DLV + G +D +E
Sbjct: 119 PRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKE 178
Query: 272 EVAYCQS 278
E Y ++
Sbjct: 179 EDNYGEA 185
>pdb|2JE6|B Chain B, Structure Of A 9-Subunit Archaeal Exosome
pdb|2JEA|B Chain B, Structure Of A 9-Subunit Archaeal Exosome Bound To Rna
pdb|2JEB|B Chain B, Structure Of A 9-Subunit Archaeal Exosome Bound To Mn Ions
pdb|4BA1|B Chain B, Archaeal Exosome (rrp4-rrp41(d182a)-rrp42) Bound To
Inorganic Phosphate
pdb|4BA2|B Chain B, Archaeal Exosome (rrp4-rrp41(d182a)-rrp42) Bound To
Inorganic Phosphate
Length = 250
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 13/237 (5%)
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVE 171
K + L+ ++ GV + A GSA E GNTK I +V+ P+E+ SL + L V
Sbjct: 26 KPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLP---DRAVLRVR 82
Query: 172 FKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALS 231
+ PF++ R E EL ++ ALE AV F +D+F +LQ D +
Sbjct: 83 YHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRL 142
Query: 232 AAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVIT 291
++ A+LAL DA IPM DL+ + G+ +D E E + ++ +
Sbjct: 143 VSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEAMWGEA----------DMP 192
Query: 292 LSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVTLPERG 348
++ M + QVT L G++ + + + + + L S +V E G
Sbjct: 193 IAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEG 249
>pdb|3L7Z|B Chain B, Crystal Structure Of The S. Solfataricus Archaeal Exosome
pdb|3L7Z|E Chain E, Crystal Structure Of The S. Solfataricus Archaeal Exosome
pdb|3L7Z|H Chain H, Crystal Structure Of The S. Solfataricus Archaeal Exosome
Length = 245
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 13/237 (5%)
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVE 171
K + L+ ++ GV + A GSA E GNTK I +V+ P+E+ SL + L V
Sbjct: 21 KPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLP---DRAVLRVR 77
Query: 172 FKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALS 231
+ PF++ R E EL ++ ALE AV F +D+F +LQ D +
Sbjct: 78 YHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRL 137
Query: 232 AAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVIT 291
++ A+LAL DA IPM DL+ + G+ +D E E + ++ +
Sbjct: 138 VSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEA----------DMP 187
Query: 292 LSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVTLPERG 348
++ M + QVT L G++ + + + + + L S +V E G
Sbjct: 188 IAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEG 244
>pdb|2BR2|B Chain B, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|D Chain D, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|F Chain F, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|H Chain H, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|J Chain J, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|L Chain L, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|N Chain N, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|P Chain P, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|R Chain R, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|T Chain T, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|V Chain V, Rnase Ph Core Of The Archaeal Exosome
pdb|2BR2|X Chain X, Rnase Ph Core Of The Archaeal Exosome
pdb|2C37|B Chain B, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|D Chain D, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|F Chain F, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|H Chain H, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|J Chain J, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|L Chain L, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|N Chain N, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|P Chain P, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|R Chain R, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|T Chain T, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|V Chain V, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C37|X Chain X, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
pdb|2C38|B Chain B, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|D Chain D, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|F Chain F, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|H Chain H, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|J Chain J, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|L Chain L, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|N Chain N, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|P Chain P, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|R Chain R, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|T Chain T, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|V Chain V, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C38|X Chain X, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
pdb|2C39|B Chain B, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|D Chain D, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|F Chain F, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|H Chain H, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|J Chain J, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|L Chain L, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|N Chain N, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|P Chain P, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|R Chain R, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|T Chain T, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|V Chain V, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
pdb|2C39|X Chain X, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
Length = 248
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 13/237 (5%)
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVE 171
K + L+ ++ GV + A GSA E GNTK I +V+ P+E+ SL + L V
Sbjct: 24 KPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLP---DRAVLRVR 80
Query: 172 FKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALS 231
+ PF++ R E EL ++ ALE AV F +D+F +LQ D +
Sbjct: 81 YHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRL 140
Query: 232 AAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVIT 291
++ A+LAL DA IPM DL+ + G+ +D E E + ++ +
Sbjct: 141 VSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEA----------DMP 190
Query: 292 LSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVTLPERG 348
++ M + QVT L G++ + + + + + L S +V E G
Sbjct: 191 IAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEG 247
>pdb|2NN6|B Chain B, Structure Of The Human Rna Exosome Composed Of Rrp41,
Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
Length = 249
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI 181
+ GV +A GSAYIEQGNTK + V+ P EI S+ R+ + ++ A F++
Sbjct: 32 RMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARALPDRAL--VNCQYSSATFSTGE 89
Query: 182 RTGWLR-DSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
R D + E+G L++ E A+ Q+D++V VLQ DG +A +N A LA
Sbjct: 90 RKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLA 149
Query: 241 LVDAAIPMYDLVTSSTLALRGGLTFIDPVE-EEVAYCQSLSSSEDDDSGVITLSYM 295
++DA IPM D V + + G D EE A L+ + SG I L M
Sbjct: 150 VLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEM 205
>pdb|2NN6|F Chain F, Structure Of The Human Rna Exosome Composed Of Rrp41,
Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
Length = 272
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 100/192 (52%), Gaps = 21/192 (10%)
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRS--------KGELYVEFK 173
+ G+ +AKGSAY+E G TKV+C+V PR+ + + +G L +F+
Sbjct: 42 RAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFR 101
Query: 174 FAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAA 233
APFA + R EE+EL L+ ALEPAV + Q+++ L+L++ GSAL+AA
Sbjct: 102 RAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAA 161
Query: 234 INCANLALVDAAIPMYDLVTSSTLALRGGLT---FIDPVEEEVAYCQSLSSSEDDDSGVI 290
+ A LAL DA + MYDLV L+L G +DP E E+ + +
Sbjct: 162 LTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLE----------EERAAAGL 211
Query: 291 TLSYMSVIQQVT 302
T++ M V+ QV
Sbjct: 212 TVALMPVLNQVA 223
>pdb|2WNR|B Chain B, The Structure Of Methanothermobacter Thermautotrophicus
Exosome Core Assembly
pdb|2WNR|D Chain D, The Structure Of Methanothermobacter Thermautotrophicus
Exosome Core Assembly
pdb|2WNR|F Chain F, The Structure Of Methanothermobacter Thermautotrophicus
Exosome Core Assembly
Length = 240
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRS-KGELYVEF 172
+ L+ ++ G+ E+A GS+Y+E G K++ +V+ PRE K QR + + +
Sbjct: 24 DELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRK----LQRPDRAVIRCRY 79
Query: 173 KFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSA 232
APF+ + R D E+ AL PA+ +F +D+F+ VL+ +G A
Sbjct: 80 NMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGTRCA 139
Query: 233 AINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEE 272
I A++AL DA IPM D+V + G +D EEE
Sbjct: 140 GITAASVALADAGIPMRDMVVACAAGKVGDQVVLDLSEEE 179
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 69/106 (65%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAIK IDKT+++ + E++ +K+L+H +IV + + + E+ +Y+I+EY GG++
Sbjct: 39 EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 98
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 99 FDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 144
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 69/106 (65%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAIK IDKT+++ + E++ +K+L+H +IV + + + E+ +Y+I+EY GG++
Sbjct: 42 EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 101
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 102 FDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 147
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK +DK + + I EI+ALK L HQHI + L ++++LEYC GG+L
Sbjct: 38 VAIKIMDKNTLGSD-LPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELF 96
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVS 126
+I S ++LSE + + RQ+V A+ ++ H DLKP+N+L + KL + G+
Sbjct: 97 DYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLF-DEYHKLKLIDFGLC 155
Query: 127 EKAKGS 132
K KG+
Sbjct: 156 AKPKGN 161
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVA+K IDKT+++ + E++ +K+L+H +IV + + + E+ +Y+++EY GG++
Sbjct: 42 EVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEV 101
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+ + +K+A
Sbjct: 102 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIA 156
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 70/106 (66%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVA+K IDKT+++ + + E++ +K+L+H +IV + + + E+ +Y+++EY GG++
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 70/106 (66%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVA+K IDKT+++ + + E++ +K+L+H +IV + + + E+ +Y+++EY GG++
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 70/106 (66%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVA+K IDKT+++ + + E++ +K+L+H +IV + + + E+ +Y+++EY GG++
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 66/110 (60%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
H E AIK I KT VS + ++ E+ LKLL H +I+ + DF D+R Y+++E GG
Sbjct: 62 HVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
+L I K +E ++Q++ + +L ++N+ H DLKP+N+L+++
Sbjct: 122 ELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLES 171
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 70/106 (66%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVA++ IDKT+++ + + E++ +K+L+H +IV + + + E+ +Y+++EY GG++
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 70/106 (66%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVA++ IDKT+++ + + E++ +K+L+H +IV + + + E+ +Y+++EY GG++
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 11/121 (9%)
Query: 4 HTEVAIKCIDKTKVSENRF-----------DSIVNEIKALKLLHHQHIVTMLDFLWDERY 52
H+E AIK I K++ + R+ + I NEI LK L H +I+ + D D++Y
Sbjct: 61 HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 112
Y++ E+ +GG+L I + K E ++Q++ + +L ++N+ H D+KP+NIL++
Sbjct: 121 FYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLE 180
Query: 113 N 113
N
Sbjct: 181 N 181
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 69/106 (65%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVA+K IDKT+++ + + E++ +K+L+H +IV + + + E+ +Y+++EY GG++
Sbjct: 34 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 93
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H + E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 94 FDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 139
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 67/106 (63%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVA+K IDKT+++ + + E++ K+L+H +IV + + + E+ +Y++ EY GG++
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEV 100
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H + E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 101 FDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 6 EVAIKCIDKTKVSENR-FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A+K I K +V + +S++ E++ LK L H +I+ + +F D+ Y Y++ E GG+
Sbjct: 76 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 135
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
L I S ++ SE + +RQ++ + ++ +N + H DLKP+N+L+++ +
Sbjct: 136 LFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 186
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 6 EVAIKCIDKTKVSENR-FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A+K I K +V + +S++ E++ LK L H +I+ + +F D+ Y Y++ E GG+
Sbjct: 77 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 136
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
L I S ++ SE + +RQ++ + ++ +N + H DLKP+N+L+++ +
Sbjct: 137 LFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 187
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 6 EVAIKCIDKTKV---SENRFDSIVN---EIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+VAIK I K K S D +N EI+ LK L+H I+ + +F E Y YI+LE
Sbjct: 43 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLEL 101
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+
Sbjct: 102 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL 153
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 6 EVAIKCIDKTKV---SENRFDSIVN---EIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+VAIK I K K S D +N EI+ LK L+H I+ + +F E Y YI+LE
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLEL 95
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+
Sbjct: 96 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL 147
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 6 EVAIKCIDKTKV---SENRFDSIVN---EIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+VAIK I K K S D +N EI+ LK L+H I+ + +F E Y YI+LE
Sbjct: 36 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLEL 94
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+
Sbjct: 95 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL 146
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 6 EVAIKCIDKTKV---SENRFDSIVN---EIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+VAIK I K K S D +N EI+ LK L+H I+ + +F E Y YI+LE
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLEL 95
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+
Sbjct: 96 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL 147
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 6 EVAIKCIDKTKV---SENRFDSIVN---EIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+VAIK I K K S D +N EI+ LK L+H I+ + +F E Y YI+LE
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLEL 95
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+
Sbjct: 96 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL 147
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 6 EVAIKCIDKTKVSENR-FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A+K I K +V + +S++ E++ LK L H +I+ + +F D+ Y Y++ E GG+
Sbjct: 53 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 112
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
L I S ++ SE + +RQ++ + ++ +N + H DLKP+N+L+++ +
Sbjct: 113 LFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 163
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K ++S +R + I E+ L+ + H +I+T+ D ++ V +ILE
Sbjct: 32 EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 91
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL-----IKNNTL 116
GG+L F+ E L+E + QF++Q++ + +L + HFDLKP+NI+ + N +
Sbjct: 92 GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 151
Query: 117 KLAGLKQGVSEKAKGSAYIEQGN 139
KL G++ K IE GN
Sbjct: 152 KLIDF--GIAHK------IEAGN 166
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K ++S +R + I E+ L+ + H +I+T+ D ++ V +ILE
Sbjct: 39 EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 98
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL-----IKNNTL 116
GG+L F+ E L+E + QF++Q++ + +L + HFDLKP+NI+ + N +
Sbjct: 99 GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 158
Query: 117 KLAGLKQGVSEKAKGSAYIEQGN 139
KL G++ K IE GN
Sbjct: 159 KLIDF--GIAHK------IEAGN 173
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 6 EVAIKCIDKTKVSENR-FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A+K I K +V + +S++ E++ LK L H +I+ + +F D+ Y Y++ E GG+
Sbjct: 59 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 118
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
L I S ++ SE + +RQ++ + ++ +N + H DLKP+N+L+++ +
Sbjct: 119 LFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 169
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 6 EVAIKCIDKTKVSENR-FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A+K I K +V + +S++ E++ LK L H +I + +F D+ Y Y++ E GG+
Sbjct: 53 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGE 112
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
L I S ++ SE + +RQ++ + + +N + H DLKP+N+L+++ +
Sbjct: 113 LFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKS 163
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 6 EVAIKCIDKTKV---SENRFDSIVN---EIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+VAI+ I K K S D +N EI+ LK L+H I+ + +F E Y YI+LE
Sbjct: 162 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLEL 220
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+
Sbjct: 221 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL 272
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 17/143 (11%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K ++ +R + I E+ L+ + H +I+T+ D ++ V +ILE
Sbjct: 53 EYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 112
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL-----IKNNTL 116
GG+L F+ E L+E + QF++Q++ + +L + HFDLKP+NI+ + N +
Sbjct: 113 GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 172
Query: 117 KLAGLKQGVSEKAKGSAYIEQGN 139
KL G++ K IE GN
Sbjct: 173 KLIDF--GIAHK------IEAGN 187
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 6 EVAIKCIDKTKV---SENRFDSIVN---EIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+VAI+ I K K S D +N EI+ LK L+H I+ + +F E Y YI+LE
Sbjct: 176 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLEL 234
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+
Sbjct: 235 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL 286
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 61/108 (56%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A+K I+K +I+ E++ LK L H +I+ + + L D YI+ E GG+L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
I ++ SE + ++Q+ + ++ ++N+ H DLKP+NIL+++
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 5 TEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
E AIK I K+ V+ + ++++E+ LK L H +I+ + +F D+R Y+++E GG
Sbjct: 47 AERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG 106
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+L I +K SE ++Q++ +L ++N+ H DLKP+N+L+++ +
Sbjct: 107 ELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKS 158
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 5 TEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
E AIK I K+ V+ + ++++E+ LK L H +I+ + +F D+R Y+++E GG
Sbjct: 30 AERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG 89
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+L I +K SE ++Q++ +L ++N+ H DLKP+N+L+++ +
Sbjct: 90 ELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKS 141
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K + +R + I E+ L+ + H +I+T+ D + V +ILE
Sbjct: 39 EYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVS 98
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++ + + + +
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 122 K 122
K
Sbjct: 159 K 159
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K + +R + I E+ L+ + H +++T+ D + V +ILE
Sbjct: 39 EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVS 98
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++ + + + +
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 122 K 122
K
Sbjct: 159 K 159
>pdb|4IFD|B Chain B, Crystal Structure Of An 11-subunit Eukaryotic Exosome
Complex Bound To Rna
Length = 248
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 129 AKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRD 188
A GS+Y+EQGN K+I V P+E P K+ ++ SK L V F+ R+
Sbjct: 38 ADGSSYMEQGNNKIITLVKGPKE-PRLKSQMDT--SKALLNVSVNITKFSKFERSKSSHK 94
Query: 189 SEEK--ELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAI 246
+E + E+ L R E V + + +D+ + VL+ DG + + IN LAL+DA I
Sbjct: 95 NERRVLEIQTSLVRMFEKNVMLNIYPRTVIDIEIHVLEQDGGIMGSLINGITLALIDAGI 154
Query: 247 PMYDLVTSSTLAL 259
M+D ++ ++ L
Sbjct: 155 SMFDYISGISVGL 167
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A+K I+K +I+ E++ LK L H +I+ + + L D YI+ E GG+L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
I ++ SE + ++Q+ + ++ ++N+ H DLKP+NIL+++
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK 157
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K + +R + I E+ L+ + H +++T+ D + V +ILE
Sbjct: 39 EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVS 98
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++ + + + +
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 122 K 122
K
Sbjct: 159 K 159
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A+K I+K +I+ E++ LK L H +I+ + + L D YI+ E GG+L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
I ++ SE + ++Q+ + ++ ++N+ H DLKP+NIL+++
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK 157
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K + +R + I E+ L+ + H +++T+ D + V +ILE
Sbjct: 39 EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVS 98
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++ + + + +
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 122 K 122
K
Sbjct: 159 K 159
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K +++ K+ S + I EI+ LKL H HI+ + + ++++EY GG+
Sbjct: 38 KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L +I H ++ E + ++ +Q++ A+ + + V H DLKP+N+L+
Sbjct: 98 LFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E IK I+K + S+ + I EI+ LK L H +I+ + + D +YI++E C+GG+L
Sbjct: 49 ERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL 107
Query: 66 CSFIRSHE----KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
I S + LSE + ++Q++ AL + +V H DLKP+NIL ++ +
Sbjct: 108 LERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS 161
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K + +R + I E+ L+ + H +++T+ D + V +ILE
Sbjct: 39 EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVS 98
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++ + + + +
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 122 K 122
K
Sbjct: 159 K 159
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K +++ K+ S + I EI+ LKL H HI+ + + ++++EY GG+
Sbjct: 38 KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L +I H ++ E + ++ +Q++ A+ + + V H DLKP+N+L+
Sbjct: 98 LFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K + +R + I E+ L+ + H +++T+ D + V +ILE
Sbjct: 39 EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVS 98
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++ + + + +
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 122 K 122
K
Sbjct: 159 K 159
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A+KCI K+ R S+ NEI LK + H++IVT+ D + Y++++ GG+L
Sbjct: 38 ALKCIKKSPAF--RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFD 95
Query: 68 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
I +E ++Q++ A+K+L EN + H DLKP+N+L
Sbjct: 96 RILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLL 138
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSEN------RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVY 54
E++ EV +K I K KV E+ + + EI L + H +I+ +LD ++ +
Sbjct: 46 KEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQ 105
Query: 55 IILE-YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
+++E + G DL +FI H +L E RQLV A+ +LR ++ H D+K +NI+I
Sbjct: 106 LVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAE 165
Query: 114 N-TLKLAGLKQGVSEKAKGSAYIEQGN 139
+ T+KL +AY+E+G
Sbjct: 166 DFTIKLIDFGS--------AAYLERGK 184
>pdb|2WP8|B Chain B, Yeast Rrp44 Nuclease
Length = 246
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 129 AKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRD 188
A GS+Y+EQGN K+I V P+E P K+ ++ SK L V F+ R+
Sbjct: 36 ADGSSYMEQGNNKIITLVKGPKE-PRLKSQMDT--SKALLNVSVNINKFSKFERSKSSHK 92
Query: 189 SEEK--ELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAI 246
+E + E+ L R E V + + +D+ + VL+ DG + + IN LAL+DA I
Sbjct: 93 NERRVLEIQTSLVRMFEKNVMLNIYPRTVIDIEIHVLEQDGGIMGSLINGITLALIDAGI 152
Query: 247 PMYDLVTSSTLALRGGLTFID 267
M+D ++ ++ L +D
Sbjct: 153 SMFDYISGISVGLYDTTPLLD 173
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 6 EVAIKCI-DKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VAIK I + E E+ L HQ+IV+M+D ++ Y+++EY +G
Sbjct: 38 KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPT 97
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL--AGL 121
L +I SH LS F Q++ +K + + H D+KPQNILI +N TLK+ G+
Sbjct: 98 LSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGI 157
Query: 122 KQGVSEKA 129
+ +SE +
Sbjct: 158 AKALSETS 165
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 6 EVAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K I+K ++++ I EI L+LL H HI+ + D + + + +++EY G +
Sbjct: 41 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNE 99
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L +I +K+SE + ++F +Q++ A+++ + + H DLKP+N+L+
Sbjct: 100 LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 146
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 6 EVAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K I+K ++++ I EI L+LL H HI+ + D + + + +++EY G +
Sbjct: 40 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNE 98
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L +I +K+SE + ++F +Q++ A+++ + + H DLKP+N+L+
Sbjct: 99 LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 145
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 6 EVAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K I+K ++++ I EI L+LL H HI+ + D + + + +++EY G +
Sbjct: 35 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNE 93
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L +I +K+SE + ++F +Q++ A+++ + + H DLKP+N+L+
Sbjct: 94 LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 140
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 6 EVAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K I+K ++++ I EI L+LL H HI+ + D + + + +++EY G +
Sbjct: 31 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNE 89
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L +I +K+SE + ++F +Q++ A+++ + + H DLKP+N+L+
Sbjct: 90 LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 136
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 6 EVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
EVAIK IDK + + + NE+K L H I+ + ++ D YVY++LE C G+
Sbjct: 38 EVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGE 97
Query: 65 LCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+ ++++ K SE + + F+ Q++ + +L + + H DL N+L+ +N +K+A
Sbjct: 98 MNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIA 154
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIR-SHEKLSEFQCQ 81
+++ EI+ + +L H +V + D D+ + +I E+ GG+L + H K+SE +
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 258
Query: 82 QFVRQLVLALKFLRENNVCHFDLKPQNILI---KNNTLKL 118
+++RQ+ L + ENN H DLKP+NI+ ++N LKL
Sbjct: 259 EYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKL 298
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQCQ 81
+++ EI+ + +L H +V + D D+ + +I E+ GG+L + H K+SE +
Sbjct: 93 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 152
Query: 82 QFVRQLVLALKFLRENNVCHFDLKPQNILI---KNNTLKL 118
+++RQ+ L + ENN H DLKP+NI+ ++N LKL
Sbjct: 153 EYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKL 192
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 37 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 96
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 97 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 6 EVAIKCIDKTKVSENRFDSIV-NEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K I + + ++ V EI LKLL H HI+ + D + + +++EY GG+
Sbjct: 36 KVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGE 94
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +I ++++E + ++F +Q++ A+++ + + H DLKP+N+L+ +N
Sbjct: 95 LFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDN 144
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 37 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 96
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 97 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K +++ K+ S + I EI+ LKL H HI+ + + +++++EY GG+
Sbjct: 43 KVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGE 102
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L +I + +L E + ++ +Q++ + + + V H DLKP+N+L+
Sbjct: 103 LFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL 149
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYM 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GGD+ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +K+A
Sbjct: 124 PGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVA 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYM 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GGD+ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +K+A
Sbjct: 124 PGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVA 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A+KCI K K + + SI NEI L+ + H++IV + D ++Y++++ GG+L
Sbjct: 51 AVKCIPK-KALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFD 109
Query: 68 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
I +E +RQ++ A+ +L + H DLKP+N+L
Sbjct: 110 RIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 152
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 77 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 137 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 195
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 77 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 137 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 195
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 2 EQHTEVAIKCIDKTKVSEN---RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILE 58
E + A+K +D K + + + + E +L H HIV +L+ + +Y++ E
Sbjct: 47 ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 106
Query: 59 YCDGGDLCSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 112
+ DG DLC I SE ++RQ++ AL++ +NN+ H D+KP+N+L+ K
Sbjct: 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASK 166
Query: 113 NNTLKLAGLKQGVSEKAKGSAYIEQGNT 140
N+ + GV+ + S + G
Sbjct: 167 ENSAPVKLGDFGVAIQLGESGLVAGGRV 194
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 77 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 137 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 195
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A K ID TK E D +V EI L H +IV +LD + E ++I++E+C GG + +
Sbjct: 66 AAKVID-TKSEEELEDYMV-EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 123
Query: 68 FIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLAGLKQGV 125
+ E+ L+E Q Q +Q + AL +L +N + H DLK NIL + +KLA GV
Sbjct: 124 VMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF--GV 181
Query: 126 SEKAKGSAYIEQGNTKVICSVFEPREIPSSKTS 158
S AK + I++ ++ + + E+ +TS
Sbjct: 182 S--AKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A K ID TK E D +V EI L H +IV +LD + E ++I++E+C GG + +
Sbjct: 66 AAKVID-TKSEEELEDYMV-EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 123
Query: 68 FIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLAGLKQGV 125
+ E+ L+E Q Q +Q + AL +L +N + H DLK NIL + +KLA GV
Sbjct: 124 VMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF--GV 181
Query: 126 SEK 128
S K
Sbjct: 182 SAK 184
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIKCI K K E + S+ NEI L + H +IV + D ++Y+I++ GG+L
Sbjct: 46 VAIKCIAK-KALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
I +E + + Q++ A+K+L + + H DLKP+N+L
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A K ID TK E D +V EI L H +IV +LD + E ++I++E+C GG + +
Sbjct: 66 AAKVID-TKSEEELEDYMV-EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 123
Query: 68 FIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLAGLKQGV 125
+ E+ L+E Q Q +Q + AL +L +N + H DLK NIL + +KLA GV
Sbjct: 124 VMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF--GV 181
Query: 126 SEK 128
S K
Sbjct: 182 SAK 184
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 30 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 89
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 90 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 148
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A K ID TK E D +V EI L H +IV +LD + E ++I++E+C GG + +
Sbjct: 39 AAKVID-TKSEEELEDYMV-EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 96
Query: 68 FIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLAGLKQGV 125
+ E+ L+E Q Q +Q + AL +L +N + H DLK NIL + +KLA GV
Sbjct: 97 VMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF--GV 154
Query: 126 SEK 128
S K
Sbjct: 155 SAK 157
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +K+A
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVA 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 49 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 108
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 109 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 167
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +I E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 49 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 108
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 109 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 167
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 29 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 88
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 89 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 147
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 33 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 92
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 93 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 151
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E H VA+K + E S + EI LK L H++IV + D L ++ + ++ E+CD
Sbjct: 25 ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84
Query: 62 GGDLCSFIRS-HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
DL + S + L + F+ QL+ L F NV H DLKPQN+LI +N LKLA
Sbjct: 85 Q-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLA 143
Query: 120 GL 121
Sbjct: 144 NF 145
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E H VA+K + E S + EI LK L H++IV + D L ++ + ++ E+CD
Sbjct: 25 ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84
Query: 62 GGDLCSFIRS-HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
DL + S + L + F+ QL+ L F NV H DLKPQN+LI +N LKLA
Sbjct: 85 Q-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLA 143
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 24 SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQ 82
++ NEI + LHH ++ + D D+ + +ILE+ GG+L I + + K+SE +
Sbjct: 94 TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN 153
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNIL 110
++RQ LK + E+++ H D+KP+NI+
Sbjct: 154 YMRQACEGLKHMHEHSIVHLDIKPENIM 181
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 37 HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
H HI+T++D +++++ + G+L ++ LSE + + +R L+ A+ FL
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 97 NNVCHFDLKPQNILIKNN 114
NN+ H DLKP+NIL+ +N
Sbjct: 219 NNIVHRDLKPENILLDDN 236
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S F + E + + L H +IV + D + +E + Y++ + GG+L
Sbjct: 56 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKLA 119
I + E SE ++Q++ ++ + N + H +LKP+N+L+ K +KLA
Sbjct: 116 FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 173
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 1 NEQHTEVAIKCIDKTKVSEN---RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIIL 57
E + A+K +D K + + + + E +L H HIV +L+ + +Y++
Sbjct: 48 RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVF 107
Query: 58 EYCDGGDLCSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 111
E+ DG DLC I SE ++RQ++ AL++ +NN+ H D+KP +L+
Sbjct: 108 EFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS 167
Query: 112 KNNT--LKLAGLKQGVSEKAKGSAYIEQGNT 140
K N+ +KL G GV+ + S + G
Sbjct: 168 KENSAPVKLGGF--GVAIQLGESGLVAGGRV 196
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIKCI K + E + S+ NEI L + H +IV + D ++Y+I++ GG+L
Sbjct: 46 VAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
I +E + + Q++ A+K+L + + H DLKP+N+L
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIKCI K + E + S+ NEI L + H +IV + D ++Y+I++ GG+L
Sbjct: 46 VAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
I +E + + Q++ A+K+L + + H DLKP+N+L
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 2 EQHTEVAIKCIDKTKVSEN---RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILE 58
E + A+K +D K + + + + E +L H HIV +L+ + +Y++ E
Sbjct: 47 ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 106
Query: 59 YCDGGDLCSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 112
+ DG DLC I SE ++RQ++ AL++ +NN+ H D+KP +L+ K
Sbjct: 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK 166
Query: 113 NNT--LKLAGLKQGVSEKAKGSAYIEQGNT 140
N+ +KL G GV+ + S + G
Sbjct: 167 ENSAPVKLGGF--GVAIQLGESGLVAGGRV 194
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIKCI K + E + S+ NEI L + H +IV + D ++Y+I++ GG+L
Sbjct: 46 VAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
I +E + + Q++ A+K+L + + H DLKP+N+L
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + + ++ +V + D +Y++LEY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYA 124
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +K+A
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVA 184
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 185 DF--GFAKRVKGRTW 197
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S F + E + + L H +IV + D + +E + Y++ + GG+L
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKLA 119
I + E SE ++Q++ ++ + N + H +LKP+N+L+ K +KLA
Sbjct: 93 FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 150
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S F + E + + L H +IV + D + +E + Y++ + GG+L
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKLA 119
I + E SE ++Q++ ++ + N + H +LKP+N+L+ K +KLA
Sbjct: 93 FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 150
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S F + E + + L H +IV + D + +E + Y++ + GG+L
Sbjct: 32 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 91
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKLA 119
I + E SE ++Q++ ++ + N + H +LKP+N+L+ K +KLA
Sbjct: 92 FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 149
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S + E + +LL H +IV + D + +E + Y++ + GG+L
Sbjct: 58 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKLAGL 121
I + E SE + Q++ ++ + ++++ H DLKP+N+L+ K +KLA
Sbjct: 118 FEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADF 177
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156
+ + + A+ T S R+ P K
Sbjct: 178 GLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGK 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 124
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I + +K+
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVT 184
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 185 DF--GFAKRVKGRTW 197
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAYIEQGNTKVICS 145
G +++ KG + G + +
Sbjct: 184 DF--GFAKRVKGRTWXLXGTPEYLAP 207
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I + +K+
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G++++ KG +
Sbjct: 184 DF--GLAKRVKGRTW 196
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAYIEQGNTKVICS 145
G +++ KG + G + +
Sbjct: 184 DF--GFAKRVKGRTWXLAGTPEYLAP 207
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I + +K+
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 35 VAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 94 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 85 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 144
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 145 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 204
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG+ +
Sbjct: 205 DF--GFAKRVKGATW 217
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 35 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 94 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K+++ + + + EI+ L H +I+ M ++ D + +Y++LE+ G+L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLA 119
++ H + E + F+ +L AL + E V H D+KP+N+L+ LK+A
Sbjct: 102 YKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIA 156
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 85 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 144
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 145 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 204
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 205 DF--GFAKRVKGRTW 217
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K+++ + + + EI+ L H +I+ M ++ D + +Y++LE+ G+L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLAGLKQG 124
++ H + E + F+ +L AL + E V H D+KP+N+L+ LK+A
Sbjct: 102 YKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
Query: 125 V 125
V
Sbjct: 162 V 162
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K+++ + + + EI+ L H +I+ M ++ D + +Y++LE+ G+L
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 102
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLA 119
++ H + E + F+ +L AL + E V H D+KP+N+L+ LK+A
Sbjct: 103 YKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIA 157
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 35 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 94 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 35 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 94 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 35 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 94 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
N++ +A + +TK E D IV EI+ L H +IV +L + + ++I++E+C
Sbjct: 32 NKETGALAAAKVIETKSEEELEDYIV-EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 90
Query: 61 DGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKL 118
GG + + + ++ L+E Q Q RQ++ AL FL + H DLK N+L+ ++L
Sbjct: 91 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRL 150
Query: 119 AGLKQGVSEK 128
A GVS K
Sbjct: 151 ADF--GVSAK 158
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
N++ +A + +TK E D IV EI+ L H +IV +L + + ++I++E+C
Sbjct: 40 NKETGALAAAKVIETKSEEELEDYIV-EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98
Query: 61 DGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKL 118
GG + + + ++ L+E Q Q RQ++ AL FL + H DLK N+L+ ++L
Sbjct: 99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRL 158
Query: 119 AGLKQGVSEK 128
A GVS K
Sbjct: 159 ADF--GVSAK 166
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 10 KCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER--YVYIILEYCDGGDLCS 67
K +D ++E +V+E+ L+ L H +IV D + D +YI++EYC+GGDL S
Sbjct: 37 KELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 96
Query: 68 FIRSHEKLSEFQCQQFV----RQLVLALKFLRENN-----VCHFDLKPQNILI 111
I K ++ ++FV QL LALK + V H DLKP N+ +
Sbjct: 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 117 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 176
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 177 DF--GFAKRVKGRTW 189
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 185 DF--GFAKRVKGRTW 197
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 10 KCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER--YVYIILEYCDGGDLCS 67
K +D ++E +V+E+ L+ L H +IV D + D +YI++EYC+GGDL S
Sbjct: 37 KELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 96
Query: 68 FIRSHEKLSEFQCQQFV----RQLVLALKFLRENN-----VCHFDLKPQNILI 111
I K ++ ++FV QL LALK + V H DLKP N+ +
Sbjct: 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 185 DF--GFAKRVKGRTW 197
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 185 DF--GFAKRVKGRTW 197
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 185 DF--GFAKRVKGRTW 197
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 50 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 109
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 110 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 169
Query: 120 GLKQGVSEKAKGSAYIEQGNTKVICS 145
G +++ KG + G + +
Sbjct: 170 DF--GFAKRVKGRTWTLCGTPEYLAP 193
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S + E + +LL H +IV + D + +E + Y+I + GG+L
Sbjct: 49 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL----IKNNTLKLAGL 121
I + E SE ++Q++ A+ + V H DLKP+N+L +K +KLA
Sbjct: 109 FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADF 168
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156
+ + + A+ T S R+ P K
Sbjct: 169 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 203
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 185 DF--GFAKRVKGRTW 197
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLW-DERYVYIILEY 59
E A+K +DK KV + + + +NE + L+ ++ +T L+F + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLTKLEFSFKDNSNLYMVMEY 123
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I + +K+
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 119 AGLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 TDF--GFAKRVKGRTW 197
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 10 KCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER--YVYIILEYCDGGDLCS 67
K +D ++E +V+E+ L+ L H +IV D + D +YI++EYC+GGDL S
Sbjct: 37 KELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 96
Query: 68 FIRSHEKLSEFQCQQFV----RQLVLALKFLRENN-----VCHFDLKPQNILI 111
I K ++ ++FV QL LALK + V H DLKP N+ +
Sbjct: 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S + E + +LL H +IV + D + +E + Y++ + GG+L
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKLAGL 121
I + E SE ++Q++ ++ N + H DLKP+N+L+ K +KLA
Sbjct: 91 FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADF 150
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156
+ + A+ T S R+ P K
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLW-DERYVYIILEY 59
E A+K +DK KV + + + +NE + L+ ++ +T L+F + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLTKLEFSFKDNSNLYMVMEY 123
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I + +K+
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 119 AGLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 TDF--GFAKRVKGRTW 197
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S + E + +LL H +IV + D + +E + Y++ + GG+L
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKLAGL 121
I + E SE ++Q++ ++ N + H DLKP+N+L+ K +KLA
Sbjct: 91 FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADF 150
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156
+ + A+ T S R+ P K
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+ E A+K IDK+K I+ L+ H +I+T+ D D +YVY++ E GG
Sbjct: 47 NXEFAVKIIDKSKRDPTEEIEIL-----LRYGQHPNIITLKDVYDDGKYVYVVTELXKGG 101
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
+L I + SE + + + +++L V H DLKP NIL
Sbjct: 102 ELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNIL 148
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A+K IDK+K I+ L+ H +I+T+ D D +YVY++ E GG+L
Sbjct: 49 EFAVKIIDKSKRDPTEEIEIL-----LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
I + SE + + + +++L V H DLKP NIL
Sbjct: 104 LDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNIL 148
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 65 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 125 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 185 DF--GFAKRVKGRTW 197
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I + +++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G++++ KG +
Sbjct: 184 DF--GLAKRVKGRTW 196
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I + +++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 33 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 91
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 92 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 145
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 51 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 110
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 111 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVT 170
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 171 DF--GFAKRVKGRTW 183
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 35 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 94 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N++I + +K+
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 35 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 94 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 VAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQL 87
EI + L HQH+V F D +V+++LE C L + + L+E + + ++RQ+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 88 VLALKFLRENNVCHFDLKPQNILIKNN 114
VL ++L N V H DLK N+ + +
Sbjct: 131 VLGCQYLHRNRVIHRDLKLGNLFLNED 157
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 24 SIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSE---- 77
++ EI+ L+ L H++++ ++D L++E + +Y+++EYC +C + + E
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC----VCGMQEMLDSVPEKRFP 107
Query: 78 -FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQGVSEKAKGSAYI 135
Q + QL+ L++L + H D+KP N+L+ TLK++ L GV+E A
Sbjct: 108 VCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISAL--GVAEALHPFAAD 165
Query: 136 EQGNTKVICSVFEPREI 152
+ T F+P EI
Sbjct: 166 DTCRTSQGSPAFQPPEI 182
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 49/83 (59%)
Query: 32 LKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLAL 91
L ++ H I+ M D + +++I++Y +GG+L S +R ++ + + ++ LAL
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL 119
Query: 92 KFLRENNVCHFDLKPQNILIKNN 114
++L ++ + DLKP+NIL+ N
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKN 142
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 168
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 37 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 92
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT 145
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 62 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 121
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 122 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 171
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQL 87
EI + L HQH+V F D +V+++LE C L + + L+E + + ++RQ+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 88 VLALKFLRENNVCHFDLKPQNILIKNN 114
VL ++L N V H DLK N+ + +
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLFLNED 177
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 168
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQL 87
EI + L HQH+V F D +V+++LE C L + + L+E + + ++RQ+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 88 VLALKFLRENNVCHFDLKPQNILIKNN 114
VL ++L N V H DLK N+ + +
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNED 153
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 45 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 100
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 101 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 152
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I + +++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 119
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 120 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 169
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQL 87
EI + L HQH+V F D +V+++LE C L + + L+E + + ++RQ+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 88 VLALKFLRENNVCHFDLKPQNILIKNN 114
VL ++L N V H DLK N+ + +
Sbjct: 149 VLGCQYLHRNRVIHRDLKLGNLFLNED 175
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQL 87
EI + L HQH+V F D +V+++LE C L + + L+E + + ++RQ+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 88 VLALKFLRENNVCHFDLKPQNILIKNN 114
VL ++L N V H DLK N+ + +
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNED 153
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 119
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 120 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 169
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 166
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S + E + +LL H +IV + D + +E + Y++ + GG+L
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKLAGL 121
I + E SE ++Q++ A+ + V H DLKP+N+L+ K +KLA
Sbjct: 91 FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADF 150
Query: 122 KQGVSEKAKGSAYIEQGNT 140
+ + A+ T
Sbjct: 151 GLAIEVQGDQQAWFGFAGT 169
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 168
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 168
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 47 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 102
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 103 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 154
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 166
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 166
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 166
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E + IK I+ +++S + E+ L + H +IV + + +YI+++YC+
Sbjct: 47 EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106
Query: 62 GGDLCSFIRSHEKL--SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKNNTLKL 118
GGDL I + + + E Q + Q+ LALK + + + H D+K QNI L K+ T++L
Sbjct: 107 GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQL 166
Query: 119 A 119
Sbjct: 167 G 167
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQL 87
EI + L HQH+V F D +V+++LE C L + + L+E + + ++RQ+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 88 VLALKFLRENNVCHFDLKPQNILIKNN 114
VL ++L N V H DLK N+ + +
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNED 151
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 46 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 101
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 102 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 153
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 43 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 98
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 99 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 150
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 37 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 92
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 144
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + +E + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 39 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 94
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 95 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 146
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 168
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 32 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 87
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 88 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 139
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 38 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 93
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 94 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 145
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 42 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 97
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 98 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 149
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 43 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 98
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 99 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 150
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 37 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 92
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 144
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 37 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 92
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ +
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 144
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 117 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 176
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 177 DF--GFAKRVKGRTW 189
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 1 NEQHTEVAIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
N+ A+K ++K K V N ++ E++ ++ L H +V + DE ++++++
Sbjct: 37 NDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDL 96
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GGDL ++ + E + F+ +LV+AL +L+ + H D+KP NIL+
Sbjct: 97 LLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL 148
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 125 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 185 DF--GFAKRVKGRTW 197
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 85 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 144
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 145 AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 195
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLW-DERYVYIILEY 59
E A+K +DK KV + + + +NE + L+ ++ +T L+F + D +Y+++EY
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLTKLEFSFKDNSNLYMVMEY 123
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N++I + +K+
Sbjct: 124 APGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 119 AGLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 TDF--GFAKRVKGRTW 197
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 22/135 (16%)
Query: 6 EVAIKCIDKTKVSENRFDSIVN------EIKALKLLHHQHIVTMLDFL------WDERYV 53
+VAIK I N FD + N E+K LK H +I+ + D L + + V
Sbjct: 82 QVAIKKI------PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 135
Query: 54 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
Y++L+ + DL I S + L+ + F+ QL+ LK++ V H DLKP N+L+
Sbjct: 136 YVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE 194
Query: 114 N-TLKLA--GLKQGV 125
N LK+ G+ +G+
Sbjct: 195 NCELKIGDFGMARGL 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 64 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGE 123
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 124 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 173
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 37 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 96
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 97 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 146
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
H +VA+K + + +F + NE+ L+ H +I+ + ++ + + I+ ++C+G
Sbjct: 58 HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGS 116
Query: 64 DLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA-- 119
L + E K FQ RQ + +L N+ H D+K NI + T+K+
Sbjct: 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDF 176
Query: 120 GLKQGVSEKAKGSAYIEQGNTKVICSVFE 148
GL V + GS +EQ V+ E
Sbjct: 177 GLAT-VKSRWSGSQQVEQPTGSVLWMAPE 204
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 22/135 (16%)
Query: 6 EVAIKCIDKTKVSENRFDSIVN------EIKALKLLHHQHIVTMLDFL------WDERYV 53
+VAIK I N FD + N E+K LK H +I+ + D L + + V
Sbjct: 81 QVAIKKI------PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134
Query: 54 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
Y++L+ + DL I S + L+ + F+ QL+ LK++ V H DLKP N+L+
Sbjct: 135 YVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE 193
Query: 114 N-TLKLA--GLKQGV 125
N LK+ G+ +G+
Sbjct: 194 NCELKIGDFGMARGL 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 36 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 95
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 96 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 145
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 59 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 118
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 119 AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 178
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 179 DF--GFAKRVKGRTW 191
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E A+K +DK KV + + + +NE + L+ ++ +V + D +Y+++EY
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI + +++
Sbjct: 124 AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 120 GLKQGVSEKAKGSAY 134
G +++ KG +
Sbjct: 184 DF--GFAKRVKGRTW 196
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 34 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 93
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 94 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 143
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 35 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 94
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 95 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 144
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 41 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 100
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 101 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 150
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 116 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 165
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G+
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 116 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 165
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K +D + + ++I EI +L+H+++V + Y+ LEYC GG+L
Sbjct: 35 VAVKIVDMKRAVDCP-ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 94 DRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTM------LDFLWDERYVYIILEY 59
+VAIK + +NR + EI+ +K L+H ++V+ L L + +EY
Sbjct: 42 QVAIKQCRQELSPKNR-ERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 100
Query: 60 CDGGDLCSFIRSHEK---LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
C+GGDL ++ E L E + + + AL++L EN + H DLKP+NI+++
Sbjct: 101 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ 160
Query: 117 KL 118
+L
Sbjct: 161 RL 162
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTM------LDFLWDERYVYIILEY 59
+VAIK + +NR + EI+ +K L+H ++V+ L L + +EY
Sbjct: 41 QVAIKQCRQELSPKNR-ERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99
Query: 60 CDGGDLCSFIRSHEK---LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
C+GGDL ++ E L E + + + AL++L EN + H DLKP+NI+++
Sbjct: 100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ 159
Query: 117 KL 118
+L
Sbjct: 160 RL 161
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S D+ + E +K L HQ +V + + E +YII EY + G
Sbjct: 33 HTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 88
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L F+++ KL+ + Q+ + F+ E N H +L+ NIL+ +
Sbjct: 89 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSD 140
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A+K I+K + +R + E++ L + +++I+ +++F D+ Y++ E GG
Sbjct: 40 EYAVKIIEK-QAGHSR-SRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS 97
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
+ + I+ + +E + + VR + AL FL + H DLKP+NIL
Sbjct: 98 ILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENIL 143
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVR 85
+ EI+ LK L H ++V +L+ +R ++++ EYCD L R + E +
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW 109
Query: 86 QLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
Q + A+ F ++N H D+KP+NILI K++ +KL
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILITKHSVIKL 143
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 27/157 (17%)
Query: 7 VAIKCIDKTKVSENRFD--SIVNEIKALKLLHHQHIVTMLDFL-------WDERYVYIIL 57
VAIK I +V E+ D I+ EI L L+H H+V +LD + +DE +Y++L
Sbjct: 81 VAIKKI--LRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE--LYVVL 136
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
E D D R+ L+E + + L++ +K++ + H DLKP N L+ + ++
Sbjct: 137 EIADS-DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSV 195
Query: 117 KLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151
K+ GL + V Y E GN+++ S PRE
Sbjct: 196 KVCDFGLARTVD-------YPENGNSQLPIS---PRE 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 28 EIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQ 86
EI ALKL H +IV + + D+ + ++++E +GG+L I+ + SE + +R+
Sbjct: 55 EITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRK 114
Query: 87 LVLALKFLRENNVCHFDLKPQNILI--KNNTLKL 118
LV A+ + + V H DLKP+N+L +N+ L++
Sbjct: 115 LVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEI 148
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ D DL
Sbjct: 34 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVD-QDLK 92
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 93 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+ H VA+K + K+++ + + + EI+ LHH +I+ + ++ +D R +Y+ILEY
Sbjct: 45 KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEY 104
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
G+L ++ E + + +L AL + V H D+KP+N
Sbjct: 105 APRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
++A K I KT+ +++ + + NEI + L H +++ + D + + +++EY DGG+L
Sbjct: 116 KLAAKII-KTRGMKDK-EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 66 CS-FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
I L+E F++Q+ ++ + + + H DLKP+NIL N K
Sbjct: 174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAK 226
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E AIK ++K + EN+ + E + L H V + D+ +Y L Y G
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGC 118
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +IR E + + ++V AL++L + H DLKP+NIL+ +
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 168
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A I+ K+S + E + +LL H +IV + D + +E + Y+I + GG+L
Sbjct: 38 EYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 97
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL----IKNNTLKLAGL 121
I + E SE ++Q++ A+ + V H +LKP+N+L +K +KLA
Sbjct: 98 FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADF 157
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156
+ + + A+ T S R+ P K
Sbjct: 158 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 192
>pdb|1UDQ|A Chain A, Crystal Structure Of The Trna Processing Enzyme Rnase Ph
T125a Mutant From Aquifex Aeolicus
Length = 255
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 17/147 (11%)
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYV- 170
K + L+ +++ E +GS I G TKVIC+ +P+ + + KG+ ++
Sbjct: 7 KEDQLRPVSIQRDFLEYPEGSCLISFGKTKVICTASVIENVPN------WLKGKGQGWIT 60
Query: 171 -EFKFAPFASQIRTGWLRDSEEKELGNH-------LKRALEPAVCRHEFSNFQVDLFVLV 222
E+ P A+Q RT +R+S + +G + RA+ AV + + + V
Sbjct: 61 AEYSMLPRATQQRT--IRESVQGRIGGRTHEIQRMIGRAMRTAVELTKIGERTIWVDCDV 118
Query: 223 LQNDGSALSAAINCANLALVDAAIPMY 249
+Q DG A +AAI A +A+ DA I ++
Sbjct: 119 IQADGGARTAAITGAFVAVADAIIKLH 145
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ + EI K L + H+V F D+ +VY++LE C L + + ++E + +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
F+RQ + +++L N V H DLK N+ + ++
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 178
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ + EI K L + H+V F D+ +VY++LE C L + + ++E + +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
F+RQ + +++L N V H DLK N+ + ++
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 178
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ + EI K L + H+V F D+ +VY++LE C L + + ++E + +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
F+RQ + +++L N V H DLK N+ + ++
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 178
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A+K IDK+K + I+ L+ H +I+T+ D D ++VY++ E GG+L
Sbjct: 54 EYAVKVIDKSKRDPSEEIEIL-----LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
I + SE + + + +++L V H DLKP NIL
Sbjct: 109 LDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A+K IDK+K + I+ L+ H +I+T+ D D ++VY++ E GG+L
Sbjct: 54 EYAVKVIDKSKRDPSEEIEIL-----LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
I + SE + + + +++L V H DLKP NIL
Sbjct: 109 LDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHH-QHIVTMLDFLWDERYVYIILEYCDGGD 64
E A K + K + ++ I++EI L+L ++ + + + + +ILEY GG+
Sbjct: 56 EYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGE 115
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ S E +SE + ++Q++ + +L +NN+ H DLKPQNIL+
Sbjct: 116 IFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILL 164
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 7 VAIKCIDKT-KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K I++ K+ EN I+N + L H +IV + + ++ I++EY GG+L
Sbjct: 47 VAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
I + + SE + + F +QL+ + + VCH DLK +N L+
Sbjct: 103 FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 70 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KL 118
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N + K+
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
Query: 119 AGLKQG-VSEKAKGSAYIEQGN 139
+ G V E +AY +G
Sbjct: 189 SDFGLGRVLEDDPEAAYTTRGG 210
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 7 VAIKCIDKT-KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K I++ K+ EN I+N + L H +IV + + ++ I++EY GG+L
Sbjct: 47 VAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
I + + SE + + F +QL+ + + VCH DLK +N L+
Sbjct: 103 FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERY-----VYIILEY 59
+VAIK + + SE E++ LK + H++++ +LD F DE Y+++ +
Sbjct: 52 KVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPF 111
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
G DL ++ HEKL E + Q V Q++ L+++ + H DLKP N+ + N +L
Sbjct: 112 M-GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV-NEDCELK 168
Query: 120 GLKQGVSEKA 129
L G++ +A
Sbjct: 169 ILDFGLARQA 178
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 7 VAIKCIDKT-KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K I++ K+ EN I+N + L H +IV + + ++ I++EY GG+L
Sbjct: 46 VAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 101
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
I + + SE + + F +QL+ + + VCH DLK +N L+
Sbjct: 102 FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 147
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ Q VA+K I E + + EI LK LHH +IV+++D + ER + ++ E+
Sbjct: 42 DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101
Query: 61 DGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+ DL + ++ L + Q + ++ QL+ + ++ + H DLKPQN+LI ++ LKL
Sbjct: 102 E-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKL 160
Query: 119 A 119
A
Sbjct: 161 A 161
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ + EI K L + H+V F D+ +VY++LE C L + + ++E + +
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
F+RQ + +++L N V H DLK N+ + ++
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 162
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ Q VA+K I E + + EI LK LHH +IV+++D + ER + ++ E+
Sbjct: 42 DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101
Query: 61 DGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+ DL + ++ L + Q + ++ QL+ + ++ + H DLKPQN+LI ++ LKL
Sbjct: 102 E-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKL 160
Query: 119 A 119
A
Sbjct: 161 A 161
>pdb|3HKM|A Chain A, Crystal Structure Of Rice(Oryza Sativa) Rrp46
pdb|3HKM|B Chain B, Crystal Structure Of Rice(Oryza Sativa) Rrp46
pdb|3HKM|C Chain C, Crystal Structure Of Rice(Oryza Sativa) Rrp46
Length = 246
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 127 EKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWL 186
++A GSA QG+T V+ +V+ P+ P ++ +++ +E + P QI
Sbjct: 25 DRAHGSARWAQGDTIVLAAVYGPK--PGTRKGENPEKAS----IEVVWKPMTGQI----- 73
Query: 187 RDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAI 246
+EKE LKR L+ N + + V+ NDGS L AIN ALV A I
Sbjct: 74 -GKQEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVVGNDGSLLPCAINACCAALVFAGI 132
Query: 247 PMYDLVTS 254
P+ L +
Sbjct: 133 PLKHLAVA 140
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + K E + + EI +K L H++IV + D + E + ++ E+ D DL
Sbjct: 33 VALKEV-KLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLK 90
Query: 67 SFIRSH------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
++ S L + F QL+ L F EN + H DLKPQN+LI K LKL
Sbjct: 91 KYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLG 150
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 34 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 92
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
+F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 93 TFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K + T ++ + +++++E+K + L H++IV +L V +I EYC GD
Sbjct: 78 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 65 LCSFIR-------------SH---EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
L +F+R SH E+LS F Q+ + FL N H D+ +N
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 196
Query: 109 ILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+L+ N + G + S YI +GN ++ P I
Sbjct: 197 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 240
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + KT++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 96
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGL 121
+ R +KLS F Q+ ++ +L AL + V H D+KP+N+L+ N LK+A
Sbjct: 97 GTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADF 156
Query: 122 KQGV 125
V
Sbjct: 157 GWSV 160
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + KT++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 96
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGL 121
+ R +KLS F Q+ ++ +L AL + V H D+KP+N+L+ N LK+A
Sbjct: 97 GTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADF 156
Query: 122 KQGV 125
V
Sbjct: 157 GWSV 160
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 58 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 116
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 117 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 171
>pdb|1UDS|A Chain A, Crystal Structure Of The Trna Processing Enzyme Rnase Ph
R126a Mutant From Aquifex Aeolicus
Length = 255
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYV- 170
K + L+ +++ E +GS I G TKVIC+ +P+ + + KG+ ++
Sbjct: 7 KEDQLRPVSIQRDFLEYPEGSCLISFGKTKVICTASVIENVPN------WLKGKGQGWIT 60
Query: 171 -EFKFAPFASQIRTGWLRDSEEKELGNH-------LKRALEPAVCRHEFSNFQVDLFVLV 222
E+ P A+Q RT +R+S + +G + RA+ AV + + + V
Sbjct: 61 AEYSMLPRATQQRT--IRESVQGRIGGRTHEIQRMIGRAMRTAVELTKIGERTIWVDCDV 118
Query: 223 LQNDGSALSAAINCANLALVDAAIPMY 249
+Q DG +AAI A +A+ DA I ++
Sbjct: 119 IQADGGTATAAITGAFVAVADAIIKLH 145
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 70 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSN 183
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 41 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 99
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 100 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 154
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 70 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 70 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 70 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 70 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 33 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS-MDLK 91
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 92 DFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 147
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 70 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 34 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS-MDLK 92
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 93 DFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 38 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 96
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 97 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 152
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 68 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 126
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 127 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 181
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ + EI LK L H ++V +++ L D E ++Y++ E + G + + + + LSE Q
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLKPLSEDQA 139
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQGVSEKAKGS 132
+ + + L+ +++L + H D+KP N+L+ ++ +K+A GVS + KGS
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADF--GVSNEFKGS 190
>pdb|1UDN|A Chain A, Crystal Structure Of The Trna Processing Enzyme Rnase Ph
From Aquifex Aeolicus
Length = 255
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYV- 170
K + L+ +++ E +GS I G TKVIC+ +P+ + + KG+ ++
Sbjct: 7 KEDQLRPVSIQRDFLEYPEGSCLISFGKTKVICTASVIENVPN------WLKGKGQGWIT 60
Query: 171 -EFKFAPFASQIRTGWLRDSEEKELGNH-------LKRALEPAVCRHEFSNFQVDLFVLV 222
E+ P A+Q RT +R+S + +G + RA+ AV + + + V
Sbjct: 61 AEYSMLPRATQQRT--IRESVQGRIGGRTHEIQRMIGRAMRTAVELTKIGERTIWVDCDV 118
Query: 223 LQNDGSALSAAINCANLALVDAAIPMY 249
+Q DG +AAI A +A+ DA I ++
Sbjct: 119 IQADGGTRTAAITGAFVAVADAIIKLH 145
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 38 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 96
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 97 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 152
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 34 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 92
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 93 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 35 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 93
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 94 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 149
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 33 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 91
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 92 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 147
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 32 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 90
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 146
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 32 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 90
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 146
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 34 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 92
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 93 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 33 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 91
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 92 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 147
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 32 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 90
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 146
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D EI+ +K L H +I+ + + D +Y+++E C GG+L + E +
Sbjct: 51 DRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR 110
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKL------AGLKQGVSEKAK-G 131
++ ++ A+ + + NV H DLKP+N L ++ LKL A K G + K G
Sbjct: 111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVG 170
Query: 132 SAY 134
+ Y
Sbjct: 171 TPY 173
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 35 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 93
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 94 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 149
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 7 VAIKCIDKT-KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K I++ K++ N I+N + L H +IV + + ++ I++EY GG+L
Sbjct: 47 VAVKYIERGEKIAANVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
I + + SE + + F +QL+ + + VCH DLK +N L+
Sbjct: 103 FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 1 NEQHT--EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYII 56
E+HT +VA+K +D K + R + + NE+ ++ HH ++V M + DE ++++
Sbjct: 65 TEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDE--LWVV 120
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+E+ +GG L + +H +++E Q ++ AL +L V H D+K +IL+ ++
Sbjct: 121 MEFLEGGALTDIV-THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD 177
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 30 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVH-QDLK 88
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
+F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 89 TFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A K I K V + D EI+ +K L H +I+ + + D +Y+++E C GG+L
Sbjct: 55 AAKKIPKYFVED--VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE 112
Query: 68 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI----KNNTLKL----- 118
+ E + ++ ++ A+ + + NV H DLKP+N L ++ LKL
Sbjct: 113 RVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGL 172
Query: 119 -AGLKQGVSEKAK-GSAY 134
A K G + K G+ Y
Sbjct: 173 AARFKPGKMMRTKVGTPY 190
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 30 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 88
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLA 145
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 30 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 88
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
++ VAIK + + R D + E + H +I+ + + + + II EY
Sbjct: 70 GKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L F+R EK EF Q V R + +K+L N H DL +NIL+ +N
Sbjct: 129 ENGALDKFLR--EKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN 183
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 30 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 88
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Query: 11 CIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--------------VYII 56
I K + +E + +I++E+ L L+HQ++V W ER ++I
Sbjct: 35 AIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYA-AWLERRNFVKPMTAVKKKSTLFIQ 93
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQ--QFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+EYC+ G L I S E L++ + + + RQ++ AL ++ + H DLKP NI I
Sbjct: 94 MEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 30 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 88
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 49 DERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
D+RY+Y+++EY GGDL + + +++ + E + + ++VLAL + H D+KP N
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 203
Query: 109 ILI-KNNTLKLA 119
+L+ K+ LKLA
Sbjct: 204 MLLDKSGHLKLA 215
>pdb|1UDO|A Chain A, Crystal Structure Of The Trna Processing Enzyme Rnase Ph
R86a Mutant From Aquifex Aeolicus
Length = 255
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYV- 170
K + L+ +++ E +GS I G TKVIC+ +P+ + + KG+ ++
Sbjct: 7 KEDQLRPVSIQRDFLEYPEGSCLISFGKTKVICTASVIENVPN------WLKGKGQGWIT 60
Query: 171 -EFKFAPFASQIRTGWLRDSEEKELGN-------HLKRALEPAVCRHEFSNFQVDLFVLV 222
E+ P A+Q RT +R+S + +G + RA+ AV + + + V
Sbjct: 61 AEYSMLPRATQQRT--IRESVQGRIGGATHEIQRMIGRAMRTAVELTKIGERTIWVDCDV 118
Query: 223 LQNDGSALSAAINCANLALVDAAIPMY 249
+Q DG +AAI A +A+ DA I ++
Sbjct: 119 IQADGGTRTAAITGAFVAVADAIIKLH 145
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 49 DERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
D+RY+Y+++EY GGDL + + +++ + E + + ++VLAL + H D+KP N
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 203
Query: 109 ILI-KNNTLKLA 119
+L+ K+ LKLA
Sbjct: 204 MLLDKSGHLKLA 215
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 49 DERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
D+RY+Y+++EY GGDL + + +++ + E + + ++VLAL + H D+KP N
Sbjct: 140 DDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 198
Query: 109 ILI-KNNTLKLA 119
+L+ K+ LKLA
Sbjct: 199 MLLDKSGHLKLA 210
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 11 CIDKTKVSENRFDSIVNEIKALK-------LLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
CI K S+ V+E AL+ L H H+V ++ ++ I EYC+GG
Sbjct: 35 CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG 94
Query: 64 DLCSFIRSHEKL----SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
L I + ++ E + + + Q+ L+++ ++ H D+KP NI I ++ A
Sbjct: 95 SLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNA 154
Query: 120 GLKQG 124
++G
Sbjct: 155 ASEEG 159
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 11 CIDKTKVSENRFDSIVNEIKALK-------LLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
CI K S+ V+E AL+ L H H+V ++ ++ I EYC+GG
Sbjct: 37 CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG 96
Query: 64 DLCSFIRSHEKL----SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
L I + ++ E + + + Q+ L+++ ++ H D+KP NI I ++ A
Sbjct: 97 SLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNA 156
Query: 120 GLKQG 124
++G
Sbjct: 157 ASEEG 161
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 11 CIDKTKVSENRFDSIVNEIKALK-------LLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
CI K S+ V+E AL+ L H H+V ++ ++ I EYC+GG
Sbjct: 35 CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG 94
Query: 64 DLCSFIRSHEKL----SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
L I + ++ E + + + Q+ L+++ ++ H D+KP NI I ++ A
Sbjct: 95 SLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNA 154
Query: 120 GLKQG 124
++G
Sbjct: 155 ASEEG 159
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K + T ++ + +++++E+K + L H++IV +L V +I EYC GD
Sbjct: 78 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 65 LCSFIR--------------SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
L +F+R ++ LS F Q+ + FL N H D+ +N+L
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 196
Query: 111 IKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+ N + G + S YI +GN ++ P I
Sbjct: 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 238
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C+G
Sbjct: 34 HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGS 92
Query: 64 DLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
L + + E ++F+ ++ + RQ + +L ++ H DLK NI + ++NT+K+
Sbjct: 93 SLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG 150
Query: 120 --GLKQGVSEKAKGSAYIEQ 137
GL V + GS EQ
Sbjct: 151 DFGLAT-VKSRWSGSHQFEQ 169
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 11 CIDKTKVSENRFDSIVNEIKALK-------LLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
CI K S+ V+E AL+ L H H+V ++ ++ I EYC+GG
Sbjct: 33 CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG 92
Query: 64 DLCSFIRSHEKL----SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
L I + ++ E + + + Q+ L+++ ++ H D+KP NI I ++ A
Sbjct: 93 SLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNA 152
Query: 120 GLKQG 124
++G
Sbjct: 153 ASEEG 157
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 7 VAIKCIDKT-KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K I++ K+ EN I+N + L H +IV + + ++ I++EY GG+L
Sbjct: 47 VAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT---LKLA 119
I + + SE + + F +QL+ + + V H DLK +N L+ + LK+A
Sbjct: 103 FERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIA 159
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 34 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS-MDLK 92
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKP+N+LI +KLA
Sbjct: 93 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 148
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 7 VAIKCIDK-TKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K I++ + EN I+N + L H +IV + + ++ II+EY GG+L
Sbjct: 48 VAVKYIERGAAIDENVQREIINH----RSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
I + + SE + + F +QL+ + + +CH DLK +N L+ +
Sbjct: 104 YERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS 152
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 49 DERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
D++Y+Y+++EY GGDL + + +++ + E + + ++VLAL + + H D+KP N
Sbjct: 146 DDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDN 204
Query: 109 ILI-KNNTLKLA 119
+L+ K+ LKLA
Sbjct: 205 MLLDKHGHLKLA 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 32 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS-MDLK 90
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKP+N+LI +KLA
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 146
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERY-----VYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK LK H++I+T+ + + + VYII E DL I S + LS+
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVI-STQMLSDDHI 114
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA--GLKQGVSEKA 129
Q F+ Q + A+K L +NV H DLKP N+LI +N LK+ GL + + E A
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERY-----VYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK LK H++I+T+ + + + VYII E DL I S + LS+
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVI-STQMLSDDHI 114
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA--GLKQGVSEKA 129
Q F+ Q + A+K L +NV H DLKP N+LI +N LK+ GL + + E A
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
H EVAI+ ID + +E++ + E+ A + H+++V + ++ II C G
Sbjct: 55 HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114
Query: 64 DLCSFIRSHEKLSEF-QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
L S +R + + + + +Q +++V + +L + H DLK +N+ N +
Sbjct: 115 TLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKV 168
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 75/142 (52%), Gaps = 14/142 (9%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C+G
Sbjct: 46 HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGS 104
Query: 64 DLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
L + + E ++F+ ++ + RQ + +L ++ H DLK NI + ++NT+K+
Sbjct: 105 SLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG 162
Query: 120 --GLKQGVSEKAK--GSAYIEQ 137
GL +EK++ GS EQ
Sbjct: 163 DFGL---ATEKSRWSGSHQFEQ 181
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERY-----VYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK LK H++I+T+ + + + VYII E DL I S + LS+
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVI-STQMLSDDHI 114
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA--GLKQGVSEKA 129
Q F+ Q + A+K L +NV H DLKP N+LI +N LK+ GL + + E A
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 32 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 90
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKP+N+LI +KLA
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 146
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 33 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 91
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKP+N+LI +KLA
Sbjct: 92 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 147
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 43/157 (27%)
Query: 1 NEQHTEVAIKCIDKTKVSE---NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIIL 57
N+ AIK ++K K+ + + I E++ +K LHH +I + + DE+Y+ +++
Sbjct: 48 NQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM 107
Query: 58 EYCDGGDLCS----FIRS--------------------------------HEKLSEFQCQ 81
E C GG L FI E L Q +
Sbjct: 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167
Query: 82 QFV----RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ + RQ+ AL +L +CH D+KP+N L N
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN 204
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%)
Query: 40 IVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNV 99
+VT+ E +++IL+Y +GG+L + + E+ +E + Q +V ++VLAL+ L + +
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI 180
Query: 100 CHFDLKPQNILIKNN 114
+ D+K +NIL+ +N
Sbjct: 181 IYRDIKLENILLDSN 195
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K + T ++ + +++++E+K + L H++IV +L V +I EYC GD
Sbjct: 78 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 65 LCSFIRSHEKLSEFQCQ--------------QFVRQLVLALKFLRENNVCHFDLKPQNIL 110
L +F+R ++ E F Q+ + FL N H D+ +N+L
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 196
Query: 111 IKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+ N + G + S YI +GN ++ P I
Sbjct: 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 238
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKP+N+LI +KLA
Sbjct: 90 DFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 145
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY G++
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
++ K E + ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 101 YKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 27 NEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQ 86
EI L L H +I+ + + + ++LE GG+L I SE V+Q
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 87 LVLALKFLRENNVCHFDLKPQNIL 110
++ A+ +L EN + H DLKP+N+L
Sbjct: 157 ILEAVAYLHENGIVHRDLKPENLL 180
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY G++
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
++ K E + ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 101 YKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
H +VA+K ++ T + + + NE+ L+ H +I+ + + + I+ ++C+G
Sbjct: 46 HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS 104
Query: 64 DLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
L + + E ++F+ ++ + RQ + +L ++ H DLK NI + ++NT+K+
Sbjct: 105 SLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG 162
Query: 120 --GLKQGVSEKAK--GSAYIEQ 137
GL +EK++ GS EQ
Sbjct: 163 DFGL---ATEKSRWSGSHQFEQ 181
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 24 SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQCQQ 82
+ + E+ LK L H +IVT+ D + E+ + ++ EY D DL ++ ++ +
Sbjct: 46 TAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKL 104
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQGVSEKAKGSAYIEQGNTK 141
F+ QL+ L + V H DLKPQN+LI + LKLA ++ Y + +
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY----DNE 160
Query: 142 VICSVFEPREI 152
V+ + P +I
Sbjct: 161 VVTLWYRPPDI 171
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+AIK I + ++R+ ++E AL K L H++IV L + ++ I +E GG L
Sbjct: 50 IAIKEIPE---RDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106
Query: 66 CSFIRSHE---KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK--NNTLKLAG 120
+ +RS K +E + +Q++ LK+L +N + H D+K N+LI + LK++
Sbjct: 107 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISD 166
Query: 121 LKQGVSEKAKG 131
G S++ G
Sbjct: 167 F--GTSKRLAG 175
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I + +SE+ F + E K + L H+ +V + +R ++II EY G L
Sbjct: 50 DVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
Query: 66 CSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+++R E FQ QQ + + + A+++L H DL +N L+ +
Sbjct: 107 LNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 156
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
++ VAIK + K +E + ++E + H +I+ + + R I+ EY
Sbjct: 74 GQRDVPVAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L +F+R+H+ + + Q +R + +++L + H DL +N+L+ +N
Sbjct: 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN 187
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
++ VAIK + K +E + ++E + H +I+ + + R I+ EY
Sbjct: 74 GQRDVPVAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L +F+R+H+ + + Q +R + +++L + H DL +N+L+ +N
Sbjct: 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN 187
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I + +SE+ F + E K + L H+ +V + +R ++II EY G L
Sbjct: 50 DVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
Query: 66 CSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+++R E FQ QQ + + + A+++L H DL +N L+ +
Sbjct: 107 LNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 156
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+ I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 31 VALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 89
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+ I +E + + EI LK L+H +IV +LD + E +Y++ E+ DL
Sbjct: 30 VALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK 88
Query: 67 SFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
F+ + + + ++ QL+ L F + V H DLKPQN+LI +KLA
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+HT+VA+K + +S ++ + E +K L H +V + + E +YII E+
Sbjct: 211 KHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAK 266
Query: 63 GDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
G L F++S E K + F Q+ + F+ + N H DL+ NIL+
Sbjct: 267 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 317
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVR 85
+ EIK LK L H+++V +L+ ++ Y++ E+ D L L Q+++
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 86 QLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQGVSEKAKGSAYIEQGNTK 141
Q++ + F +N+ H D+KP+NIL+ ++ +KL + A G Y ++ T+
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ E
Sbjct: 70 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSN 183
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+AIK I + ++R+ ++E AL K L H++IV L + ++ I +E GG L
Sbjct: 36 IAIKEIPE---RDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 92
Query: 66 CSFIRSHE---KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK--NNTLKLAG 120
+ +RS K +E + +Q++ LK+L +N + H D+K N+LI + LK++
Sbjct: 93 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISD 152
Query: 121 LKQGVSEKAKG 131
G S++ G
Sbjct: 153 F--GTSKRLAG 161
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I + +SE+ F + E K + L H+ +V + +R ++II EY G L
Sbjct: 41 DVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 97
Query: 66 CSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+++R E FQ QQ + + + A+++L H DL +N L+ +
Sbjct: 98 LNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 147
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+HT+VA+K + +S ++ + E +K L H +V + + E +YII E+
Sbjct: 205 KHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAK 260
Query: 63 GDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
G L F++S E K + F Q+ + F+ + N H DL+ NIL+
Sbjct: 261 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 311
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAI+ ++ + + + + I+NEI ++ + +IV LD +++++EY GG L
Sbjct: 47 EVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + + E Q R+ + AL+FL N V H D+K NIL+
Sbjct: 105 TDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K + T ++ + +++++E+K + L H++IV +L V +I EYC GD
Sbjct: 70 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 65 LCSFIRSHEK----------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +F+R + L F Q+ + FL N H D+ +N+L+ N
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 188
Query: 115 TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+ G + S YI +GN ++ P I
Sbjct: 189 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAI+ ++ + + + + I+NEI ++ + +IV LD +++++EY GG L
Sbjct: 47 EVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + + E Q R+ + AL+FL N V H D+K NIL+
Sbjct: 105 TDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAI+ ++ + + + + I+NEI ++ + +IV LD +++++EY GG L
Sbjct: 47 EVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + + E Q R+ + AL+FL N V H D+K NIL+
Sbjct: 105 TDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYV----YIILE 58
H +VA+K + + F E + L+H IV + D E YI++E
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
Y DG L + + ++ + + + AL F +N + H D+KP NILI N +K
Sbjct: 97 YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVK 156
Query: 118 LA--GLKQGVSEKAK 130
+ G+ + +++
Sbjct: 157 VVDFGIARAIADSGN 171
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ E
Sbjct: 41 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXM 99
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 100 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 154
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 292 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 347
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 348 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 399
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I + +SE+ F + E K + L H+ +V + +R ++II EY G L
Sbjct: 34 DVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 90
Query: 66 CSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+++R E FQ QQ + + + A+++L H DL +N L+ +
Sbjct: 91 LNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 140
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + K +E + + E + H +I+ + + + V I+ E
Sbjct: 70 SKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I + +SE+ F + E K + L H+ +V + +R ++II EY G L
Sbjct: 30 DVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 86
Query: 66 CSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+++R E FQ QQ + + + A+++L H DL +N L+ +
Sbjct: 87 LNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 136
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAI+ ++ + + + + I+NEI ++ + +IV LD +++++EY GG L
Sbjct: 48 EVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + + E Q R+ + AL+FL N V H D+K NIL+
Sbjct: 106 TDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 150
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I + +SE+ F + E K + L H+ +V + +R ++II EY G L
Sbjct: 35 DVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
Query: 66 CSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+++R E FQ QQ + + + A+++L H DL +N L+ +
Sbjct: 92 LNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 141
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K + T ++ + +++++E+K + L H++IV +L V +I EYC GD
Sbjct: 78 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 65 LCSFIRSHEK----------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L +F+R + L F Q+ + FL N H D+ +N+L+ N
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 196
Query: 115 TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+ G + S YI +GN ++ P I
Sbjct: 197 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 234
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T+VA+K + +S F + E +K L H +V + + E +YII EY G
Sbjct: 38 TKVAVKTLKPGTMSVQAF---LEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGS 94
Query: 65 LCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
L F++S E K+ + F Q+ + ++ N H DL+ N+L+ + +
Sbjct: 95 LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM 148
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+HT+VA+K + +S ++ + E +K L H +V + + E +YII E+
Sbjct: 38 KHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAK 93
Query: 63 GDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
G L F++S E K + F Q+ + F+ + N H DL+ NIL+
Sbjct: 94 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 144
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 3/148 (2%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK I E + + E+ LK L H++I+ + + +++I EY + DL
Sbjct: 62 VAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLK 120
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLAGLKQGV 125
++ + +S + F+ QL+ + F H DLKPQN+L+ ++ + LK G
Sbjct: 121 KYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGD 180
Query: 126 SEKAKGSAY-IEQGNTKVICSVFEPREI 152
A+ I Q ++I + P EI
Sbjct: 181 FGLARAFGIPIRQFTHEIITLWYRPPEI 208
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 36 HHQHIVTMLDFLWDERYVYIILEYCDG---GDLCSFIRSHEKLSEFQCQQFVRQLVLALK 92
HH+ ++ +Y+ +I+EY L SFIRS + ++ QL A+
Sbjct: 99 HHKSVIVNPS---QNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155
Query: 93 FLRENNVCHFDLKPQNILI--KNNTLKL 118
F+ +CH D+KPQN+L+ K+NTLKL
Sbjct: 156 FIHSLGICHRDIKPQNLLVNSKDNTLKL 183
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I + +SE+ F + E K + L H+ +V + +R ++II EY G L
Sbjct: 35 DVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
Query: 66 CSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+++R E FQ QQ + + + A+++L H DL +N L+ +
Sbjct: 92 LNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 141
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 95
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 96 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII+E+ G+L
Sbjct: 41 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + +++S Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 155
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 95
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 96 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 155
Query: 122 KQGV 125
V
Sbjct: 156 GWSV 159
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI++EY G
Sbjct: 43 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGS 98
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 94
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 95 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANF 154
Query: 122 KQGV 125
V
Sbjct: 155 GWSV 158
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI++EY G
Sbjct: 43 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGS 98
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + ++ E+ LK ++H++I+++L+ ++ VY+++E
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
D +LC I H +L + + Q++ +K L + H DLKP NI++K++ TLK+
Sbjct: 110 DA-NLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 166
Query: 120 --GLKQGVSEKAKGSAYI 135
GL + S + Y+
Sbjct: 167 DFGLARTASTNFMMTPYV 184
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 95
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 96 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANF 155
Query: 122 KQGV 125
V
Sbjct: 156 GWSV 159
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII+E+ G+L
Sbjct: 41 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + +++S Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 155
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 118
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 119 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 176
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 96
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 97 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 154
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAP---L 92
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 93 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADF 152
Query: 122 KQGV 125
V
Sbjct: 153 GWSV 156
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 93
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 94 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 48 VAIKKVLQGKAFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 102 PATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 162 LKLCDFGSAKQLVRG-----EPNVSXICSRY 187
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 97
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 98 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 157
Query: 122 KQGV 125
V
Sbjct: 158 GWSV 161
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 92
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 93 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 122 KQGV 125
V
Sbjct: 153 GWSV 156
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 118
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 119 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 176
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 97
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA 119
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 98 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 97
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 98 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 157
Query: 122 KQGV 125
V
Sbjct: 158 GWSV 161
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 92
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 93 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 122 KQGV 125
V
Sbjct: 153 GWSV 156
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 92
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 93 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 122 KQGV 125
V
Sbjct: 153 GWSV 156
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 92
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 93 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 122 KQGV 125
V
Sbjct: 153 GWSV 156
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 92
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 93 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 122 KQGV 125
V
Sbjct: 153 GWSV 156
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 4 HTEVAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYV----YIILE 58
H +VA+K + + F E + L+H IV + D E YI++E
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
Y DG L + + ++ + + + AL F +N + H D+KP NI+I N +K
Sbjct: 97 YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 118 L 118
+
Sbjct: 157 V 157
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 4 HTEVAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYV----YIILE 58
H +VA+K + + F E + L+H IV + D E YI++E
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
Y DG L + + ++ + + + AL F +N + H D+KP NI+I N +K
Sbjct: 97 YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 118 L 118
+
Sbjct: 157 V 157
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 46 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 103
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ N+ +KL G
Sbjct: 104 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF--G 161
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 162 LSRYMEDSTYYKASKGKLPIKWMAPESI 189
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 39 HIVTMLDFLWD----ERYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALK 92
HIV +LD + +R + II+E +GG+L S I R + +E + + +R + A++
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 93 FLRENNVCHFDLKPQNILI----KNNTLKLA 119
FL +N+ H D+KP+N+L K+ LKL
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 173
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 69 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 126
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ N+ +KL G
Sbjct: 127 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF--G 184
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 185 LSRYMEDSTYYKASKGKLPIKWMAPESI 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 44 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 101
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ N+ +KL G
Sbjct: 102 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF--G 159
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 160 LSRYMEDSTYYKASKGKLPIKWMAPESI 187
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 91
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 92 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 151
Query: 122 KQGV 125
V
Sbjct: 152 GWSV 155
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 93
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 94 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 153
Query: 122 KQGV 125
V
Sbjct: 154 GWSV 157
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 93
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 94 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 153
Query: 122 KQGV 125
V
Sbjct: 154 GWSV 157
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 95
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 96 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 155
Query: 122 KQGV 125
V
Sbjct: 156 GWSV 159
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY G
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG-- 93
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 94 -TVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 122 KQGV 125
V
Sbjct: 153 GWSV 156
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A+K I K E + + EI LK L H +IV + D + ++ + ++ E+ D DL
Sbjct: 30 ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKK 88
Query: 68 FIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+ E L + F+ QL+ + + + V H DLKPQN+LI + LK+A
Sbjct: 89 LLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEK----LSEFQCQ 81
+ EI LK L+H +++ ++ + I+LE D GDL I+ +K + E
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 82 QFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQGVSEKAKGSA 133
++ QL AL+ + V H D+KP N+ I +KL L G +K +A
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 4 HTEVAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYV----YIILE 58
H +VA+K + + F E + L+H IV + D E YI++E
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
Y DG L + + ++ + + + AL F +N + H D+KP NI+I N +K
Sbjct: 97 YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 118 L 118
+
Sbjct: 157 V 157
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 21 RFD-----SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKL 75
RFD + + E+K ++ L H +++ + L+ ++ + I EY GG L I+S +
Sbjct: 45 RFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD-- 102
Query: 76 SEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
S++ Q F + + + +L N+ H DL N L++ N
Sbjct: 103 SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVREN 144
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 94
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 95 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 154
Query: 122 KQGV 125
V
Sbjct: 155 GWSV 158
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 53 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 109
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 110 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 169
Query: 122 KQGV 125
V
Sbjct: 170 GWSV 173
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 95
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 96 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 155
Query: 122 KQGV 125
V
Sbjct: 156 GWSV 159
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A+K I K E + + EI LK L H +IV + D + ++ + ++ E+ D DL
Sbjct: 30 ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKK 88
Query: 68 FIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+ E L + F+ QL+ + + + V H DLKPQN+LI + LK+A
Sbjct: 89 LLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 39 HIVTMLDFLWD----ERYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALK 92
HIV +LD + +R + II+E +GG+L S I R + +E + + +R + A++
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 93 FLRENNVCHFDLKPQNILI----KNNTLKLA 119
FL +N+ H D+KP+N+L K+ LKL
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 154
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A+K I K E + + EI LK L H +IV + D + ++ + ++ E+ D DL
Sbjct: 30 ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKK 88
Query: 68 FIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+ E L + F+ QL+ + + + V H DLKPQN+LI + LK+A
Sbjct: 89 LLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 43 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 100
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ N+ +KL G
Sbjct: 101 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF--G 158
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 159 LSRYMEDSTYYKASKGKLPIKWMAPESI 186
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 11 CIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--------------VYII 56
I K + +E + +I++E+ L L+HQ++V W ER ++I
Sbjct: 35 AIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYA-AWLERRNFVKPMTAVKKKSTLFIQ 93
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQ--QFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+EYC+ L I S E L++ + + + RQ++ AL ++ + H DLKP NI I
Sbjct: 94 MEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 89
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 90 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 149
Query: 122 KQGV 125
V
Sbjct: 150 GWSV 153
>pdb|4IFD|D Chain D, Crystal Structure Of An 11-subunit Eukaryotic Exosome
Complex Bound To Rna
Length = 245
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
G+ + GS+ +TKVICSV P E P ++ L Q L +E P A + T
Sbjct: 30 GILDHVDGSSEFVSQDTKVICSVTGPIE-PKARQELPTQ-----LALEIIVRP-AKGVAT 82
Query: 184 GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSA-------LSAAINC 236
+ EK L + L+ L P + RH + + +L++ LS IN
Sbjct: 83 -----TREKVLEDKLRAVLTPLITRHCYPRQLCQITCQILESGEDEAEFSLRELSCCINA 137
Query: 237 ANLALVDAAIPMYDLVTSSTLALRGGLT--FIDPVEEEVAYCQSLSSSEDDDSGVITLSY 294
A LALVDA I + + S +A+ + +DP E++ S+ + + L +
Sbjct: 138 AFLALVDAGIALNSMCASIPIAIIKDTSDIIVDPTAEQLKISLSVHT--------LALEF 189
Query: 295 MSVIQQVTQVTLV---GTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVT 343
++ + V V L+ G +++L +E C+ L T+ +++++ D+++
Sbjct: 190 VNGGKVVKNVLLLDSNGDFNEDQLFSLLELGEQKCQELVTN-IRRIIQDNIS 240
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 210 TRVAIKTLKPGNMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 265
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 266 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 317
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 41 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 98
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ N+ +KL G
Sbjct: 99 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF--G 156
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESI 184
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 38 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 95
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ N+ +KL G
Sbjct: 96 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF--G 153
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 154 LSRYMEDSTYYKASKGKLPIKWMAPESI 181
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 41 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 98
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ N+ +KL G
Sbjct: 99 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF--G 156
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESI 184
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY L
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---L 95
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 96 GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 155
Query: 122 KQGV 125
V
Sbjct: 156 GWSV 159
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY-VYIILEYCD 61
+ +VA+KCI ++ + + E + L H ++V +L + +E+ +YI+ EY
Sbjct: 43 RGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98
Query: 62 GGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
G L ++RS + L +F + A+++L NN H DL +N+L+ + +
Sbjct: 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV--- 155
Query: 120 GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSK 165
AK S + G TK S + ++P T+ E R K
Sbjct: 156 ---------AKVSDF---GLTKEASSTQDTGKLPVKWTAPEALREK 189
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 7 VAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + + E++ L H +I+ + + D VY+ILEY G
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG-- 93
Query: 66 CSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121
+ R +KLS+F Q+ ++ +L AL + V H D+KP+N+L+ + LK+A
Sbjct: 94 -TVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 122 KQGV 125
V
Sbjct: 153 GWSV 156
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 209 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 264
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 316
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 46 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + +++S Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 103 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 160
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 209 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 264
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 316
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY-VYIILEYCD 61
+ +VA+KCI ++ + + E + L H ++V +L + +E+ +YI+ EY
Sbjct: 34 RGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 89
Query: 62 GGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
G L ++RS + L +F + A+++L NN H DL +N+L+ + +
Sbjct: 90 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV 146
>pdb|3HQI|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
SpopmathxBTB3-Box-Pucsbc1
pdb|3HQI|B Chain B, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
SpopmathxBTB3-Box-Pucsbc1
pdb|3HU6|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
SpopmathxBTB3-Box-Pucsbc1
pdb|3HU6|B Chain B, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
SpopmathxBTB3-Box-Pucsbc1
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 354 SGLWSDCKFYVGND----VHCKEFKAHKLILSMSSPVFATMFHGELCE--KGDTKILDIT 407
GLW + +F D V +EF+AHK IL+ SPVF+ MF E+ E K +I D+
Sbjct: 166 GGLWENSRF---TDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE 222
Query: 408 PEAFSTML 415
PE F M+
Sbjct: 223 PEVFKEMM 230
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYV----YIILE 58
H +VA+K + + F E + L+H IV + D E YI++E
Sbjct: 54 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 113
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
Y DG L + + ++ + + + AL F +N + H D+KP NI+I N +K
Sbjct: 114 YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 173
Query: 118 LA--GLKQGVSEKAK 130
+ G+ + +++
Sbjct: 174 VMDFGIARAIADSGN 188
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 117 KLAGLKQGVSEKAKGSAYIE 136
K+ L G++ A S +E
Sbjct: 166 KI--LDFGLARTAGTSFMME 183
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 49 DERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
DE ++Y++++Y GGDL + + E KL E + ++ ++VLA+ + + + H D+KP
Sbjct: 145 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPD 204
Query: 108 NILIK-NNTLKLA 119
N+L+ N ++LA
Sbjct: 205 NVLLDVNGHIRLA 217
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T+VA+K + +S F + E +K L H +V + + E +YII E+ G
Sbjct: 37 TKVAVKTLKPGTMSVQAF---LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGS 93
Query: 65 LCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
L F++S E K+ + F Q+ + ++ N H DL+ N+L+ + +
Sbjct: 94 LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM 147
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 45 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 102
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L ++++H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 103 LRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 199
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 49 DERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
DE ++Y++++Y GGDL + + E KL E + ++ ++VLA+ + + + H D+KP
Sbjct: 161 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPD 220
Query: 108 NILIK-NNTLKLA 119
N+L+ N ++LA
Sbjct: 221 NVLLDVNGHIRLA 233
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 150 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 204 KI--LDFGLARTA-GTSFM 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 117 KLAGLKQGVSEKAKGSAYIE 136
K+ L G++ A S +E
Sbjct: 166 KI--LDFGLARTAGTSFMME 183
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 41 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + +++S Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 155
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 421 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 478
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ N+ +KL G
Sbjct: 479 SFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF--G 536
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPESI 564
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK + K+ +E + ++E + H +++ + + V II E+ + G L
Sbjct: 64 VAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
SF+R ++ + + Q +R + +K+L + N H DL +NIL+ +N
Sbjct: 123 SFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN 171
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 43 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 98
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII+E+ G+L
Sbjct: 46 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 102
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 160
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY + G
Sbjct: 40 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGS 95
Query: 65 LCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ E + Q V Q+ + ++ N H DL+ NIL+ N
Sbjct: 96 LLDFLKG-ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGEN 147
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY + G
Sbjct: 40 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGS 95
Query: 65 LCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ E + Q V Q+ + ++ N H DL+ NIL+ N
Sbjct: 96 LLDFLKG-ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGEN 147
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 41 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + +++S Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 155
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDF------LWDERYVYIILEY 59
+VA+K + + S E++ LK L H++++ +LD + D VY++
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
G DL + ++S + LS+ Q V QL+ LK++ + H DLKP N+ + ++ +L
Sbjct: 115 M-GADLNNIVKS-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS-ELR 171
Query: 120 GLKQGVSEKA 129
L G++ +A
Sbjct: 172 ILDFGLARQA 181
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 36 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 91
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 92 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 143
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+T+VAIK + +S +S + E + +K L H +V + + E +YI+ EY + G
Sbjct: 33 NTKVAIKTLKPGTMSP---ESFLEEAQIMKKLKHDKLVQLYAVV-SEEPIYIVTEYMNKG 88
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
L F++ E L Q+ + ++ N H DL+ NIL+ N +
Sbjct: 89 SLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLI 143
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY-VYIILEYCD 61
+ +VA+KCI ++ + + E + L H ++V +L + +E+ +YI+ EY
Sbjct: 28 RGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83
Query: 62 GGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
G L ++RS + L +F + A+++L NN H DL +N+L+ + +
Sbjct: 84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV--- 140
Query: 120 GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSK 165
AK S + G TK S + ++P T+ E R K
Sbjct: 141 ---------AKVSDF---GLTKEASSTQDTGKLPVKWTAPEALREK 174
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 29/156 (18%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEY 59
EVAIK + + K +NR E++ ++++ H ++V + F + DE ++ ++LEY
Sbjct: 66 EVAIKKVLQDKRFKNR------ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119
Query: 60 CDGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--KNN 114
+ + + + + + ++ QL+ +L ++ +CH D+KPQN+L+ +
Sbjct: 120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG 179
Query: 115 TLKLAGLKQGVSEKAKGSAYI---EQGNTKVICSVF 147
LKL GSA I + N ICS +
Sbjct: 180 VLKLIDF---------GSAKILIAGEPNVSXICSRY 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 32 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 87
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 88 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 139
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW-DERYVYIILEYCDGGDLC 66
A+K ++K + + S E + + + + +T L F + DE Y+Y+++EY GGDL
Sbjct: 90 AMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLL 149
Query: 67 SFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
+ + + E++ + ++ ++V+A+ + H D+KP NIL+ + ++LA
Sbjct: 150 TLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSC 209
Query: 125 VSEKAKGS 132
+ +A G+
Sbjct: 210 LKLRADGT 217
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 34 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 89
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 90 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 141
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 150 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 204 KI--LDFGLARTA-GTSFM 219
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 49 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 106
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 107 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 166
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 203
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 114 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 167
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 168 KI--LDFGLARTA-GTSFM 183
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 48 VAIKKVLQGKAFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 162 LKLCDFGSAKQLVRG-----EPNVSYICSRY 187
>pdb|4EOZ|A Chain A, Crystal Structure Of The Spop Btb Domain Complexed With
The Cul3 N- Terminal Domain
pdb|4EOZ|C Chain C, Crystal Structure Of The Spop Btb Domain Complexed With
The Cul3 N- Terminal Domain
Length = 145
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 339 SDHVTLPERGRYVLNSGLWSDCKFYVGND----VHCKEFKAHKLILSMSSPVFATMFHGE 394
S+ V +PE GLW + +F D V +EF+AHK IL+ SPVF+ MF E
Sbjct: 2 SNMVKVPECRLADELGGLWENSRF---TDCCLCVAGQEFQAHKAILAARSPVFSAMFEHE 58
Query: 395 LCE--KGDTKILDITPEAFSTML 415
+ E K +I D+ PE F M+
Sbjct: 59 MEESKKNRVEINDVEPEVFKEMM 81
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YI+ EY G+L
Sbjct: 60 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLL 116
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQ 123
++R + E+++ Q+ A+++L + N H DL +N L+ +N+ +K+A
Sbjct: 117 DYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADF-- 174
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + + S++
Sbjct: 175 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 48 VAIKKVLQGKAFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 162 LKLCDFGSAKQLVRG-----EPNVSYICSRY 187
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY-VYIILEYCDGGD 64
+VA+KCI ++ + + E + L H ++V +L + +E+ +YI+ EY G
Sbjct: 218 KVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273
Query: 65 LCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
L ++RS + L +F + A+++L NN H DL +N+L+ + +
Sbjct: 274 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV 327
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI++EY G
Sbjct: 43 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVMEYMSKGC 98
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+T VA+K +T + + + E + LK H +IV ++ ++ +YI++E GG
Sbjct: 139 NTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 64 DLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGL 121
D +F+R+ +L Q V +++L H DL +N L+ + N LK++
Sbjct: 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDF 257
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIP---SSKTSLEYQRSKGE 167
G+S + Y G R++P ++ +L Y R E
Sbjct: 258 --GMSREEADGVYAASGGL---------RQVPVKWTAPEALNYGRYSSE 295
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|3DD6|A Chain A, Crystal Structure Of Rph, An Exoribonuclease From Bacillus
Anthracis At 1.7 A Resolution
Length = 255
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 28/150 (18%)
Query: 130 KGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYV--EFKFAPFASQIRTGWLR 187
+GS IE G+TKVICS +P + R +G+ +V E+ P A++ RT +R
Sbjct: 35 EGSVLIEVGDTKVICSATIEERVPP------FMRGEGKGWVTAEYAMIPRATEQRT--IR 86
Query: 188 DSEEK-------ELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
+S + E+ + RAL V V + V+Q DG +A+I A +A
Sbjct: 87 ESSKGKVTGRTMEIQRLIGRALRAVVDLEALGERTVWIDCDVIQADGGTRTASITGAYVA 146
Query: 241 LVDA-----------AIPMYDLVTSSTLAL 259
+V A IP+ D + ++++ +
Sbjct: 147 MVLAFEKLLQAEKVSKIPVKDYLAATSVGI 176
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 209 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVGEYMSKGS 264
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 316
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAI+ ++ + + + + I+NEI ++ + +IV LD +++++EY GG L
Sbjct: 48 EVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + + E Q R+ + AL+FL N V H ++K NIL+
Sbjct: 106 TDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL 150
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 60 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 117
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 118 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 177
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 73 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 130
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 131 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 190
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 227
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 117 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 170
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 171 KI--LDFGLARTA-GTSFM 186
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 113 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 167 KI--LDFGLARTA-GTSFM 182
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 45 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 102
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 103 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 199
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 60 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 117
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 118 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 177
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 40 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 97
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 98 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 157
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 194
>pdb|2VKP|A Chain A, Crystal Structure Of Btb Domain From Btbd6
pdb|2VKP|B Chain B, Crystal Structure Of Btb Domain From Btbd6
Length = 109
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 352 LNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCE-KGDTKILDITPEA 410
N+ L +D F VG + AHK +L++ S VF F+G+L E K + I D+ P A
Sbjct: 3 FNNELXADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAXFYGDLAEVKSEIHIPDVEPAA 62
Query: 411 FSTMLDSDHHARVNISSD 428
F +L + +++ +D
Sbjct: 63 FLILLKYXYSDEIDLEAD 80
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 48 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 105
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 106 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 165
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 202
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+T+L + +Y+I+EY G+L
Sbjct: 70 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL 128
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 189 LVTENNVMKIA 199
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 113 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 167 KI--LDFGLARTA-GTSFM 182
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 27 NEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVR 85
EI L + H++I+ + + + +I E+ G D+ I + +L+E + +V
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVH 109
Query: 86 QLVLALKFLRENNVCHFDLKPQNILI---KNNTLKLAGLKQG 124
Q+ AL+FL +N+ HFD++P+NI+ +++T+K+ Q
Sbjct: 110 QVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQA 151
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 42 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 196
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 43 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVCEYMSKGS 98
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 113 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 167 KI--LDFGLARTA-GTSFM 182
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 47 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 104
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 105 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 164
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 201
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 111 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 164
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 165 KI--LDFGLARTA-GTSFM 180
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 42 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 196
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 41 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 98
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 99 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 158
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 195
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 106 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 160 KI--LDFGLARTA-GTSFM 175
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 46 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 103
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 104 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 163
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 200
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 248 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + +++S Q+ A+++L + N H +L +N L+ N L K+A
Sbjct: 305 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF-- 362
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 363 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
>pdb|3U1K|A Chain A, Crystal Structure Of Human Pnpase
pdb|3U1K|C Chain C, Crystal Structure Of Human Pnpase
pdb|3U1K|B Chain B, Crystal Structure Of Human Pnpase
pdb|3U1K|D Chain D, Crystal Structure Of Human Pnpase
Length = 630
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 14/150 (9%)
Query: 131 GSAYIEQGNTKVICSV-FEPRE--IPSSK--TSLEYQRSKGELYVEFKFAPFASQIRTGW 185
GSA ++G T+V+C+V F+ E I S + T++ + K + ++F P+A+ G
Sbjct: 343 GSALFQRGQTQVLCTVTFDSLESGIKSDQVITAINGIKDK-NFMLHYEFPPYATN-EIGK 400
Query: 186 LRDSEEKELGNHL--KRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVD 243
+ +ELG+ ++AL P + R +F F + + VL+++GS+ A+ +LAL+D
Sbjct: 401 VTGLNRRELGHGALAEKALYPVIPR-DFP-FTIRVTSEVLESNGSSSMASACGGSLALMD 458
Query: 244 AAIPMYDLVTSSTLALRGGLTFIDPVEEEV 273
+ +P+ V + L +T DP + E+
Sbjct: 459 SGVPISSAVAGVAIGL---VTKTDPEKGEI 485
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 129 AKGSAYIEQGNTKV-ICSVFEPREIPSSKTSL--EYQRSKGELYVEFKFAPFASQIRTGW 185
A GSA ++ G+T V + +V + + PS L +Y++ A A +I T +
Sbjct: 28 ADGSAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQK----------AAAAGRIPTNY 77
Query: 186 LR---DSEEKEL--GNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
LR + +KE+ + R++ P F + QV +L + AIN A++A
Sbjct: 78 LRREVGTSDKEILTSRIIDRSIRPLFPAGYFYDTQVLCNLLAVDGVNEPDVLAINGASVA 137
Query: 241 LVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVA 274
L + IP V + + + G ++P +E++
Sbjct: 138 LSLSDIPWNGPVGAVRIGIIDGEYVVNPTRKEMS 171
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 105 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 158
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 159 KI--LDFGLARTA-GTSFM 174
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 31/174 (17%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K + K K + +++++E+K + +L H++IV +L +Y+I EYC GD
Sbjct: 77 QVAVKML-KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 65 LCSFIRS-HEKLS----EFQCQQ------------------FVRQLVLALKFLRENNVCH 101
L +++RS EK S E++ Q+ F Q+ ++FL + H
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH 195
Query: 102 FDLKPQNILIK-NNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
DL +N+L+ +K+ GL + + S Y+ +GN ++ P +
Sbjct: 196 RDLAARNVLVTHGKVVKICDFGLARDI---MSDSNYVVRGNARLPVKWMAPESL 246
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 106 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 160 KI--LDFGLARTA-GTSFM 175
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K + H+ +V + + E +YI+ EY G
Sbjct: 43 TRVAIKTLKPGTMSPEAF---LQEAQVMKKIRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 98
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + ++ E+ LK ++H++I+++L+ ++ VY+++E
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
D +LC I H +L + + Q++ +K L + H DLKP NI++K++ TLK+
Sbjct: 112 DA-NLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +LC I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 106 DA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 160 KI--LDFGLARTA-GTSFM 175
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K+++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q+++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLSQVIQMELDHERMS-----YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 43 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGS 98
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL NIL+ N
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGEN 150
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 46 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 160
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 127 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 180
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-- 115
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 181 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 240
Query: 116 LKL 118
LKL
Sbjct: 241 LKL 243
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 6 EVAIKCIDKT--------KVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYII 56
E A+K ID T +V E R ++ + E+ L K+ H +I+ + D + +++
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELR-EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G+L ++ LSE + ++ +R L+ + L + N+ H DLKP+NIL+ ++
Sbjct: 103 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 160
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 82 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-- 115
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195
Query: 116 LKL 118
LKL
Sbjct: 196 LKL 198
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K+++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q+++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLSQVIQMELDHERMS-----YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 84 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 137
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-- 115
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 138 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 197
Query: 116 LKL 118
LKL
Sbjct: 198 LKL 200
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 43 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 157
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 158 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 86 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 139
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-- 115
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 140 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 199
Query: 116 LKL 118
LKL
Sbjct: 200 LKL 202
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 45 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 101
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 102 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 159
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 160 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 53 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 106
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 107 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 166
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 167 LKLCDFGSAKQLVRG-----EPNVSYICSRY 192
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 6 EVAIKCIDKT--------KVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYII 56
E A+K ID T +V E R ++ + E+ L K+ H +I+ + D + +++
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELR-EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G+L ++ LSE + ++ +R L+ + L + N+ H DLKP+NIL+ ++
Sbjct: 103 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 160
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 46 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 160
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 43 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 157
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 158 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 82 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 196 LKLCDFGSAKQLVRG-----EPNVSXICSRY 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 60 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 113
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 114 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 173
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 174 LKLCDFGSAKQLVRG-----EPNVSXICSRY 199
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 76 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 129
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 130 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 189
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 190 LKLCDFGSAKQLVRG-----EPNVSYICSRY 215
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 43 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 157
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 158 GLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K+++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q+++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLSQVIQMELDHERMS-----YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 61 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 114
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 115 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 174
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 175 LKLCDFGSAKQLVRG-----EPNVSYICSRY 200
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 41 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 155
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
>pdb|2NN6|D Chain D, Structure Of The Human Rna Exosome Composed Of Rrp41,
Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
Length = 237
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI 181
+Q + + GSA QG+T V+ V+ P E+ SK + ++ E+ + K
Sbjct: 36 EQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEI--FNKATLEVILRPKIG------ 87
Query: 182 RTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLAL 241
L EK ++ E V + + + V+ + GS L+ +N A +AL
Sbjct: 88 ----LPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACMAL 143
Query: 242 VDAAIPMYDLVTSSTLALRG-GLTFIDPVEEE 272
VDA +PM L AL G +DP ++
Sbjct: 144 VDAGVPMRALFCGVACALDSDGTLVLDPTSKQ 175
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 60 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 113
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 114 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 173
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 174 LKLCDFGSAKQLVRG-----EPNVSXICSRY 199
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 48 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 162 LKLCDFGSAKQLVRG-----EPNVSXICSRY 187
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 67 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 120
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 121 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 180
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 181 LKLCDFGSAKQLVRG-----EPNVSXICSRY 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILEYCDGGD 64
VA+K +D K + R + + NE+ ++ H+++V M + + DE +++++E+ +GG
Sbjct: 179 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGA 234
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L + +H +++E Q ++ AL L V H D+K +IL+
Sbjct: 235 LTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 280
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 49 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 102
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 103 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 162
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 163 LKLCDFGSAKQLVRG-----EPNVSXICSRY 188
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 48 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 162 LKLCDFGSAKQLVRG-----EPNVSYICSRY 187
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 48 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 162 LKLCDFGSAKQLVRG-----EPNVSXICSRY 187
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 56 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 109
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 110 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 169
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 170 LKLCDFGSAKQLVRG-----EPNVSXICSRY 195
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 41 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 155
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
G DL + ++S +KL++ Q + Q++ LK++ ++ H DLKP N+ + ++
Sbjct: 109 MGADLNNIVKS-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 162
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 54 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 110
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 111 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 168
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 169 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 42 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 98
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 156
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 157 GLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 52 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 105
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 106 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 165
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 166 LKLCDFGSAKQLVRG-----EPNVSXICSRY 191
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILEYCDGGD 64
VA+K +D K + R + + NE+ ++ H+++V M + + DE +++++E+ +GG
Sbjct: 102 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGA 157
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L + +H +++E Q ++ AL L V H D+K +IL+ ++
Sbjct: 158 LTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 206
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 39 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + +++S Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 153
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G + K P + +K S++
Sbjct: 154 GLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 6 EVAIKCIDKT--------KVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYII 56
E A+K ID T +V E R ++ + E+ L K+ H +I+ + D + +++
Sbjct: 31 EYAVKIIDVTGGGSFSAEEVQELR-EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 89
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G+L ++ LSE + ++ +R L+ + L + N+ H DLKP+NIL+ ++
Sbjct: 90 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 147
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 43 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGC 98
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 22/123 (17%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVT------------MLDFLWDERYVY 54
AIK +D T E +N +K K HH++I T M D LW
Sbjct: 52 AAIKVMDVTGDEEEEIKQEINMLK--KYSHHRNIATYYGAFIKKNPPGMDDQLW------ 103
Query: 55 IILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 112
+++E+C G + I++ + L E R+++ L L ++ V H D+K QN+L+
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
Query: 113 NNT 115
N
Sbjct: 164 ENA 166
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGG 63
T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY G
Sbjct: 61 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 64 DL-------------CSFIRSHEKLSEFQCQQFVR---QLVLALKFLRENNVCHFDLKPQ 107
+L SF SH + + V Q+ +++L H DL +
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 108 NILI-KNNTLKLA 119
N+L+ ++N +K+A
Sbjct: 180 NVLVTEDNVMKIA 192
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 41 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 98
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ + +KL G
Sbjct: 99 SFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDF--G 156
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESI 184
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
++ VAIK + K +E + + E + H +I+ + + + V I+ EY
Sbjct: 47 GKRELPVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYM 105
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L +F++ ++ + + Q +R + +K+L + H DL +NILI +N
Sbjct: 106 ENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSN 160
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLH---HQHIVTMLDFLWDERY-----VYIILE 58
VA+K + E S V E+ L+ L H ++V ++D R V ++ E
Sbjct: 32 VALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFE 91
Query: 59 YCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNT 115
+ D DL +++ L + +RQ + L FL N + H DLKP+NIL+ T
Sbjct: 92 HVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT 150
Query: 116 LKLA 119
+KLA
Sbjct: 151 VKLA 154
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLH---HQHIVTMLDFLWDERY-----VYIILE 58
VA+K + E S V E+ L+ L H ++V ++D R V ++ E
Sbjct: 32 VALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFE 91
Query: 59 YCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNT 115
+ D DL +++ L + +RQ + L FL N + H DLKP+NIL+ T
Sbjct: 92 HVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT 150
Query: 116 LKLA 119
+KLA
Sbjct: 151 VKLA 154
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILEYCDGGD 64
VA+K +D K + R + + NE+ ++ H+++V M + + DE +++++E+ +GG
Sbjct: 59 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGA 114
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L + +H +++E Q ++ AL L V H D+K +IL+ ++
Sbjct: 115 LTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 163
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+EY G
Sbjct: 42 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFW--YAPESLTESKFSV 196
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGG 63
T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY G
Sbjct: 61 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 64 DLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
+L ++++ E+LS Q+ +++L H DL +
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 108 NILI-KNNTLKLA 119
N+L+ ++N +K+A
Sbjct: 180 NVLVTEDNVMKIA 192
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILEYCDGGD 64
VA+K +D K + R + + NE+ ++ H+++V M + + DE +++++E+ +GG
Sbjct: 57 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGA 112
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L + +H +++E Q ++ AL L V H D+K +IL+ ++
Sbjct: 113 LTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 161
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 7 VAIKCIDKTKVSENRFDSI----VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
VAIK I SE + D I + EIK L+ L H +I+ +LD + + ++ ++ +
Sbjct: 38 VAIKKIKLGHRSEAK-DGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET 96
Query: 63 GDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAG 120
DL I+ + L+ + ++ + L++L ++ + H DLKP N+L+ +N LKLA
Sbjct: 97 -DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLAD 155
Query: 121 LKQGVSEKAKGSAYIEQGNTK 141
S + AY Q T+
Sbjct: 156 FGLAKSFGSPNRAYXHQVVTR 176
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILEYCDGGD 64
VA+K +D K + R + + NE+ ++ H+++V M + + DE +++++E+ +GG
Sbjct: 52 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGA 107
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L + +H +++E Q ++ AL L V H D+K +IL+ ++
Sbjct: 108 LTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 156
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGG 63
T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY G
Sbjct: 53 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 111
Query: 64 DLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
+L ++++ E+LS Q+ +++L H DL +
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 171
Query: 108 NILI-KNNTLKLA 119
N+L+ ++N +K+A
Sbjct: 172 NVLVTEDNVMKIA 184
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGG 63
T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY G
Sbjct: 61 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 64 DLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
+L ++++ E+LS Q+ +++L H DL +
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 108 NILI-KNNTLKLA 119
N+L+ ++N +K+A
Sbjct: 180 NVLVTEDNVMKIA 192
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILEYCDGGD 64
VA+K +D K + R + + NE+ ++ H+++V M + + DE +++++E+ +GG
Sbjct: 48 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGA 103
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L + +H +++E Q ++ AL L V H D+K +IL+ ++
Sbjct: 104 LTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD 152
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK + K +E + ++E + H +I+ + + + V I+ E+ + G L
Sbjct: 45 VAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALD 103
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLA--GLK 122
SF+R ++ + + Q +R + +++L E + H DL +NIL+ +N + K++ GL
Sbjct: 104 SFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
Query: 123 QGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+ + E + Y K+ P I
Sbjct: 164 RFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGG 63
T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY G
Sbjct: 54 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 112
Query: 64 DLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
+L ++++ E+LS Q+ +++L H DL +
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 172
Query: 108 NILI-KNNTLKLA 119
N+L+ ++N +K+A
Sbjct: 173 NVLVTEDNVMKIA 185
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII+E+ G+L
Sbjct: 39 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 95
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + +++S Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 153
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G K P + +K S++
Sbjct: 154 GLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLH---HQHIVTMLDFLWDERY-----VYIILE 58
VA+K + E S V E+ L+ L H ++V ++D R V ++ E
Sbjct: 32 VALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFE 91
Query: 59 YCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNT 115
+ D DL +++ L + +RQ + L FL N + H DLKP+NIL+ T
Sbjct: 92 HVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT 150
Query: 116 LKLA 119
+KLA
Sbjct: 151 VKLA 154
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGG 63
T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY G
Sbjct: 50 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 108
Query: 64 DLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
+L ++++ E+LS Q+ +++L H DL +
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 168
Query: 108 NILI-KNNTLKLA 119
N+L+ ++N +K+A
Sbjct: 169 NVLVTEDNVMKIA 181
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+T VA+K +T + + + E + LK H +IV ++ ++ +YI++E GG
Sbjct: 139 NTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 64 DLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGL 121
D +F+R+ +L Q V +++L H DL +N L+ + N LK++
Sbjct: 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDF 257
Query: 122 KQGVS-EKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S E+A G G +V P + + S E
Sbjct: 258 --GMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K I + +SE+ F E + + L H +V E +YI+ EY G L
Sbjct: 34 DVAVKMIKEGSMSEDEF---FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90
Query: 66 CSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+++RSH K L Q + + + FL + H DL +N L+ +
Sbjct: 91 LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD 140
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + +E EI+ LK L H +IV + R + +I+E+ G
Sbjct: 45 VAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGS 102
Query: 65 LCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLA--G 120
L +++ H E++ + Q+ Q+ +++L H DL +NIL++N N +K+ G
Sbjct: 103 LREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL 159
L + + + + E G + + + P + SK S+
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFW--YAPESLTESKFSV 199
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 287 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H +L +N L+ N L K+A
Sbjct: 344 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF-- 401
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 402 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 438
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 116 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 234
Query: 110 LI-KNNTLKLA--GLKQGVS 126
L+ +NN +K+A GL + ++
Sbjct: 235 LVTENNVMKIADFGLARDIN 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 421 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 478
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ + +KL G
Sbjct: 479 SFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDF--G 536
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S Y + K+ P I
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPESI 564
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
++ VAIK + K +E + + E + H ++V + + + V I++E+
Sbjct: 68 GKRDVAVAIKTL-KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFM 126
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ G L +F+R H+ + + Q +R + +++L + H DL +NIL+ +N
Sbjct: 127 ENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSN 181
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGG 63
T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY G
Sbjct: 102 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 160
Query: 64 DLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
+L ++++ E+LS Q+ +++L H DL +
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 220
Query: 108 NILI-KNNTLKLA 119
N+L+ ++N +K+A
Sbjct: 221 NVLVTEDNVMKIA 233
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGG 63
T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY G
Sbjct: 61 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 64 DLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
+L ++++ E+LS Q+ +++L H DL +
Sbjct: 120 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 108 NILI-KNNTLKLA 119
N+L+ ++N +K+A
Sbjct: 180 NVLVTEDNVMKIA 192
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Query: 11 CIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--------------VYII 56
I K + +E + +I++E+ L L+HQ++V W ER ++I
Sbjct: 35 AIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYA-AWLERRNFVKPXTAVKKKSTLFIQ 93
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQ--QFVRQLVLALKFLRENNVCHFDLKPQNILI 111
EYC+ L I S E L++ + + + RQ++ AL ++ + H +LKP NI I
Sbjct: 94 XEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFI 149
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK + + R D ++E + H +I+ + + + V II EY + G L
Sbjct: 60 VAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 118
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+F+R ++ + + Q +R + +K+L + + H DL +NIL+ +N
Sbjct: 119 AFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSN 167
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 4 HTEVAIKCIDKTKVSENRFD-SIVNEIKALKLLHHQHIVTMLDFLWDERYV----YIILE 58
H +VA+K + + F E + L+H IV + E YI++E
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVME 96
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
Y DG L + + ++ + + + AL F +N + H D+KP NI+I N +K
Sbjct: 97 YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 118 L 118
+
Sbjct: 157 V 157
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 245 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H +L +N L+ N L K+A
Sbjct: 302 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF-- 359
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G Y K P + +K S++
Sbjct: 360 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 396
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGG 63
T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY G
Sbjct: 46 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 104
Query: 64 DLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
+L ++++ E+LS Q+ +++L H DL +
Sbjct: 105 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 164
Query: 108 NILI-KNNTLKLA 119
N+L+ ++N +K+A
Sbjct: 165 NVLVTEDNVMKIA 177
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 70 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 189 LVTENNVMKIA 199
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K + T ++ + +++++E+K + L H++IV +L V +I EYC GD
Sbjct: 63 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 65 LCSFIRSHEK------LSEFQCQQ-----------------FVRQLVLALKFLRENNVCH 101
L +F+R + L+ Q + F Q+ + FL N H
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIH 181
Query: 102 FDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
D+ +N+L+ N + G + S YI +GN ++ P I
Sbjct: 182 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK + K +E + ++E + H +I+ + + + V I+ E+ + G L
Sbjct: 47 VAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALD 105
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
SF+R ++ + + Q +R + +++L E + H DL +NIL+ +N
Sbjct: 106 SFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSN 154
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 70 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 189 LVTENNVMKIA 199
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 70 VAVKML-KDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 189 LVTENNVMKIA 199
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 62 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 180
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 181 LVTENNVMKIA 191
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 70 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 129 REYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 189 LVTENNVMKIA 199
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K+++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLSQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 59 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 177
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 178 LVTENNVMKIA 188
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL- 118
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + + LK+
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 167
Query: 119 -AGLKQGVSEKAKG 131
AGL + ++ G
Sbjct: 168 DAGLARHTDDEMTG 181
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 36 HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR 95
+H +V + E ++ ++EY +GGDL ++ KL E + + ++ LAL +L
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 96 ENNVCHFDLKPQNILI 111
E + + DLK N+L+
Sbjct: 171 ERGIIYRDLKLDNVLL 186
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDF------LWDERYVYIILEY 59
+VA+K + + S E++ LK L H++++ +LD + D VY++
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
G DL + ++ + LS+ Q V QL+ LK++ + H DLKP N+ + ++ +L
Sbjct: 115 M-GADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS-ELR 171
Query: 120 GLKQGVSEKA 129
L G++ +A
Sbjct: 172 ILDFGLARQA 181
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK + + R D ++E + H +I+ + + + V II EY + G L
Sbjct: 39 VAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 97
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+F+R ++ + + Q +R + +K+L + + H DL +NIL+ +N
Sbjct: 98 AFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN 146
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK K S++ + + E ++ H HIV ++ + E V+II+E C G+L
Sbjct: 41 VAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 98
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
SF++ + L + QL AL +L H D+ +N+L+ N+ +KL G
Sbjct: 99 SFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF--G 156
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREI 152
+S + S + K+ P I
Sbjct: 157 LSRYMEDSTXXKASKGKLPIKWMAPESI 184
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 16/107 (14%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE--------------RYVYIILEYCDGGDLCSFIRS 71
+ EIK ++ L H +IV + + L VYI+ EY + DL + +
Sbjct: 56 LREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ 114
Query: 72 HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
L E + F+ QL+ LK++ NV H DLKP N+ I L L
Sbjct: 115 GPLLEE-HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVL 160
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 37 HQHIVTMLDFLW--DERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL 94
H++IV +L+ L ++R VY++ +Y + DL + IR++ L Q V QL+ +K+L
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRAN-ILEPVHKQYVVYQLIKVIKYL 125
Query: 95 RENNVCHFDLKPQNILI 111
+ H D+KP NIL+
Sbjct: 126 HSGGLLHRDMKPSNILL 142
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 57 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNV 175
Query: 110 LI-KNNTLKLA--GLKQGVS 126
L+ +NN +K+A GL + ++
Sbjct: 176 LVTENNVMKIADFGLARDIN 195
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK + + R D ++E + H +I+ + + + V II EY + G L
Sbjct: 45 VAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 103
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+F+R ++ + + Q +R + +K+L + + H DL +NIL+ +N
Sbjct: 104 AFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN 152
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 35 LHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL 94
++H IV + E +Y+IL++ GGDL + + +E + ++ +L LAL L
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 95 RENNVCHFDLKPQNILI 111
+ + DLKP+NIL+
Sbjct: 143 HSLGIIYRDLKPENILL 159
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDF------LWDERYVYIILEY 59
+VA+K + + S E++ LK L H++++ +LD + D VY++
Sbjct: 47 KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 106
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
G DL + ++ + LS+ Q V QL+ LK++ + H DLKP N+ + N +L
Sbjct: 107 M-GADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV-NEDCELR 163
Query: 120 GLKQGVSEKA 129
L G++ +A
Sbjct: 164 ILDFGLARQA 173
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK + K+ +E + ++E + H +++ + + V II E+ + G L
Sbjct: 38 VAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
SF+R ++ + + Q +R + +K+L + N H L +NIL+ +N
Sbjct: 97 SFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSN 145
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 36 HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR 95
+H +V + E ++ ++EY +GGDL ++ KL E + + ++ LAL +L
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 96 ENNVCHFDLKPQNILI 111
E + + DLK N+L+
Sbjct: 139 ERGIIYRDLKLDNVLL 154
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 35 LHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL 94
++H IV + E +Y+IL++ GGDL + + +E + ++ +L LAL L
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 95 RENNVCHFDLKPQNILI 111
+ + DLKP+NIL+
Sbjct: 144 HSLGIIYRDLKPENILL 160
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 1 NEQHT--EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILE 58
E+H+ +VA+K +D K + R + + NE+ ++ H ++V M +++++E
Sbjct: 65 REKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME 122
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ GG L + S +L+E Q ++ AL +L V H D+K +IL+
Sbjct: 123 FLQGGALTDIV-SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL 174
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 72 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLAGLKQGVSEKAKGSAY 134
++L N+ H D+KP+N+L N LKL G +++ G Y
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF--GFAKETTGEKY 175
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 35 LHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL 94
++H IV + E +Y+IL++ GGDL + + +E + ++ +L LAL L
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 95 RENNVCHFDLKPQNILI 111
+ + DLKP+NIL+
Sbjct: 143 HSLGIIYRDLKPENILL 159
>pdb|3B4T|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Rnase Ph,
The Mycobacterium Tuberculosis Structural Genomics
Consortium Target Rv1340
pdb|3B4T|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Rnase Ph,
The Mycobacterium Tuberculosis Structural Genomics
Consortium Target Rv1340
pdb|3B4T|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Rnase Ph,
The Mycobacterium Tuberculosis Structural Genomics
Consortium Target Rv1340
pdb|3B4T|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Rnase Ph,
The Mycobacterium Tuberculosis Structural Genomics
Consortium Target Rv1340
pdb|3B4T|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Rnase Ph,
The Mycobacterium Tuberculosis Structural Genomics
Consortium Target Rv1340
pdb|3B4T|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Rnase Ph,
The Mycobacterium Tuberculosis Structural Genomics
Consortium Target Rv1340
Length = 262
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQ 180
+ +G +E GS IE G+TKV+C+ +P + + G L E+ P A+
Sbjct: 21 ITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGL----GWLTAEYAMLPSATH 76
Query: 181 IRT------GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAI 234
R+ G L +E+ + R+L + + + VLQ DG +AAI
Sbjct: 77 SRSDRESVRGRL-SGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAI 135
Query: 235 NCANLALVDA 244
A +AL DA
Sbjct: 136 TGAYVALADA 145
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + + R +++++E+K L L +H +IV +L +I EYC GDL
Sbjct: 56 VAVKMLKPSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 114
Query: 66 CSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFLRENNVCHFDLK 105
+F+R K F C + F Q+ + FL N H DL
Sbjct: 115 LNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 172
Query: 106 PQNILIKNNTL-KLAGLKQGVSEKAKG-SAYIEQGNTKVICSVFEPREI 152
+NIL+ + + K+ G++ K S Y+ +GN ++ P I
Sbjct: 173 ARNILLTHGRITKICDF--GLARDIKNDSNYVVKGNARLPVKWMAPESI 219
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 36 HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR 95
+H +V + E ++ ++EY +GGDL ++ KL E + + ++ LAL +L
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 96 ENNVCHFDLKPQNILI 111
E + + DLK N+L+
Sbjct: 124 ERGIIYRDLKLDNVLL 139
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAG 120
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + N +L
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKI 166
Query: 121 LKQGVS 126
L +G++
Sbjct: 167 LDRGLA 172
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + + LK+
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 167
Query: 120 GL 121
G
Sbjct: 168 GF 169
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C
Sbjct: 32 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWC 90
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 91 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 150
Query: 119 A--GLKQGVSEKAKGSAYIEQ 137
GL V + GS EQ
Sbjct: 151 GDFGLAT-VKSRWSGSHQFEQ 170
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK + +S F + E + +K L H+ +V + + E + I+ EY G
Sbjct: 33 TRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIXIVTEYMSKGS 88
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L F++ + L Q Q+ + ++ N H DL+ NIL+ N
Sbjct: 89 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 140
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 39 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + +++S Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 153
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G K P + +K S++
Sbjct: 154 GLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C
Sbjct: 29 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWC 87
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 88 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 147
Query: 119 A--GLKQGVSEKAKGSAYIEQ 137
GL V + GS EQ
Sbjct: 148 GDFGLAT-VKSRWSGSHQFEQ 167
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C
Sbjct: 55 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWC 113
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 114 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 173
Query: 119 A--GLKQGVSEKAKGSAYIEQ 137
GL V + GS EQ
Sbjct: 174 GDFGLAT-VKSRWSGSHQFEQ 193
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 36 HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR 95
+H +V + E ++ ++EY +GGDL ++ KL E + + ++ LAL +L
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 96 ENNVCHFDLKPQNILI 111
E + + DLK N+L+
Sbjct: 128 ERGIIYRDLKLDNVLL 143
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + K S E++ LK + H++++ +LD R VY++ +
Sbjct: 62 VAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 120
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 121 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 173
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C
Sbjct: 54 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWC 112
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 113 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 172
Query: 119 A--GLKQGVSEKAKGSAYIEQ 137
GL V + GS EQ
Sbjct: 173 GDFGLAT-VKSRWSGSHQFEQ 192
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C
Sbjct: 32 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWC 90
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 91 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 150
Query: 119 A--GLKQGVSEKAKGSAYIEQ 137
GL V + GS EQ
Sbjct: 151 GDFGLAT-VKSRWSGSHQFEQ 170
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C
Sbjct: 27 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWC 85
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 119 A--GLKQGVSEKAKGSAYIEQ 137
GL V + GS EQ
Sbjct: 146 GDFGLAT-VKSRWSGSHQFEQ 165
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII+E+ G+L
Sbjct: 42 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 98
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 156
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G K P + +K S++
Sbjct: 157 GLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 193
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 70 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 110 LI-KNNTLKLA 119
L+ +NN +++A
Sbjct: 189 LVTENNVMRIA 199
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLXQVIQMELDHERMS-----YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDE----RYVYIILEYCDGGDLCSFIRSHEK---L 75
D + E + LK L+H++IV + F +E R+ +I+E+C G L + + L
Sbjct: 52 DVQMREFEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL 109
Query: 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
E + +R +V + LREN + H ++KP NI+
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW-----DERYVY--IILEY 59
VAIK + + NR I+ + L +LHH +IV + + + D R +Y +++EY
Sbjct: 51 VAIKKVIQDPRFRNRELQIMQD---LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107
Query: 60 C-DGGDLC--SFIRSHEKLSEFQCQQFVRQLVLALK--FLRENNVCHFDLKPQNILIK-- 112
D C ++ R + F+ QL+ ++ L NVCH D+KP N+L+
Sbjct: 108 VPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA 167
Query: 113 NNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVF 147
+ TLKL G ++K S + N ICS +
Sbjct: 168 DGTLKLCDF--GSAKKLSPS----EPNVAYICSRY 196
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + + R +++++E+K L L +H +IV +L +I EYC GDL
Sbjct: 72 VAVKMLKPSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 130
Query: 66 CSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFLRENNVCHFDLK 105
+F+R K F C + F Q+ + FL N H DL
Sbjct: 131 LNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 188
Query: 106 PQNILIKNNTL-KLAGLKQGVSEKAKG-SAYIEQGNTKVICSVFEPREI 152
+NIL+ + + K+ G++ K S Y+ +GN ++ P I
Sbjct: 189 ARNILLTHGRITKICDF--GLARDIKNDSNYVVKGNARLPVKWMAPESI 235
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDE----RYVYIILEYCDGGDLCSFIRSHEK---L 75
D + E + LK L+H++IV + F +E R+ +I+E+C G L + + L
Sbjct: 52 DVQMREFEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL 109
Query: 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
E + +R +V + LREN + H ++KP NI+
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|1OYP|A Chain A, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYP|B Chain B, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYP|C Chain C, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYP|D Chain D, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYP|E Chain E, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYP|F Chain F, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYR|A Chain A, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYR|B Chain B, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYR|C Chain C, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYR|D Chain D, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYR|E Chain E, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
pdb|1OYR|F Chain F, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
Length = 245
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 130 KGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYV--EFKFAPFASQIRTGWLR 187
+GS I GNTKVIC+ +P + R G+ ++ E+ P A+ RT +R
Sbjct: 25 EGSVLITAGNTKVICNASVEDRVPP------FLRGGGKGWITAEYSMLPRATNQRT--IR 76
Query: 188 DSEEKELGNH-------LKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
+S + ++ + RAL V + + + V+Q DG +A+I A LA
Sbjct: 77 ESSKGKISGRTMEIQRLIGRALRAVVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLA 136
Query: 241 LVDAAIPMYDLVTSSTL 257
+ AI + L+ + T+
Sbjct: 137 M---AIAIGKLIKAGTI 150
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY G+L
Sbjct: 70 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL 128
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 189 LVTENNVMKIA 199
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAG 120
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + N +L
Sbjct: 109 MGADLNNIVKX-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDXELKI 166
Query: 121 LKQGVS 126
L G++
Sbjct: 167 LDFGLA 172
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + + R +++++E+K L L +H +IV +L +I EYC GDL
Sbjct: 74 VAVKMLKPSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 132
Query: 66 CSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFLRENNVCHFDLK 105
+F+R K F C + F Q+ + FL N H DL
Sbjct: 133 LNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 190
Query: 106 PQNILIKNNTL-KLAGLKQGVSEKAKG-SAYIEQGNTKVICSVFEPREI 152
+NIL+ + + K+ G++ K S Y+ +GN ++ P I
Sbjct: 191 ARNILLTHGRITKICDF--GLARDIKNDSNYVVKGNARLPVKWMAPESI 237
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + + R +++++E+K L L +H +IV +L +I EYC GDL
Sbjct: 79 VAVKMLKPSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 66 CSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFLRENNVCHFDLK 105
+F+R K F C + F Q+ + FL N H DL
Sbjct: 138 LNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 195
Query: 106 PQNILIKNNTL-KLAGLKQGVSEKAKG-SAYIEQGNTKVICSVFEPREI 152
+NIL+ + + K+ G++ K S Y+ +GN ++ P I
Sbjct: 196 ARNILLTHGRITKICDF--GLARDIKNDSNYVVKGNARLPVKWMAPESI 242
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 114
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + ++
Sbjct: 115 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 168
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 474
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 475 LVHQVSMGMKYLEESNFVHRDLAARNVLL 503
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 110
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + ++
Sbjct: 111 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 164
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + + R +++++E+K L L +H +IV +L +I EYC GDL
Sbjct: 79 VAVKMLKPSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 66 CSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFLRENNVCHFDLK 105
+F+R K F C + F Q+ + FL N H DL
Sbjct: 138 LNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 195
Query: 106 PQNILIKNNTL-KLAGLKQGVSEKAKG-SAYIEQGNTKVICSVFEPREI 152
+NIL+ + + K+ G++ K S Y+ +GN ++ P I
Sbjct: 196 ARNILLTHGRITKICDF--GLARHIKNDSNYVVKGNARLPVKWMAPESI 242
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKX-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 7 VAIKCIDKT-KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VAIK + + K S ++ I+ E++ L+ L H + + E ++++EYC G
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSA 140
Query: 66 CSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
+ H+K L E + + L +L +N+ H D+K NIL+ L
Sbjct: 141 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL 192
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 114
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 115 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 21/139 (15%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+ AIK + K S++ E++ L KL HH +I+ +L Y+Y+ +EY G+
Sbjct: 44 DAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN 102
Query: 65 LCSFIR----------------SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
L F+R + LS Q F + + +L + H DL +N
Sbjct: 103 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN 162
Query: 109 ILIKNNTL-KLA--GLKQG 124
IL+ N + K+A GL +G
Sbjct: 163 ILVGENYVAKIADFGLSRG 181
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 7 VAIKCIDKTKVSENRFDSIVN-EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K +T S+ F + E + L H+V + DF + +Y+ +G DL
Sbjct: 62 VALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDL 121
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ +R L+ + VRQ+ AL H D+KP+NIL+ +
Sbjct: 122 AAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSAD 170
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 473
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 474 LVHQVSMGMKYLEESNFVHRDLAARNVLL 502
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 21/139 (15%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+ AIK + K S++ E++ L KL HH +I+ +L Y+Y+ +EY G+
Sbjct: 54 DAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN 112
Query: 65 LCSFIR----------------SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
L F+R + LS Q F + + +L + H DL +N
Sbjct: 113 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN 172
Query: 109 ILIKNNTL-KLA--GLKQG 124
IL+ N + K+A GL +G
Sbjct: 173 ILVGENYVAKIADFGLSRG 191
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLSQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+ +L+ ++ VYI++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLSQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 70 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 128
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 129 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 181
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL- 118
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + + LK+
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 167
Query: 119 -AGLKQGVSEKAKG 131
GL + ++ G
Sbjct: 168 DGGLARHTDDEMTG 181
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 114
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 115 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 18/160 (11%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + SE+ E + L +L HQHIV + R + ++ EY GDL
Sbjct: 74 VAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 67 SFIRSH---------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
F+RSH L Q Q+ + +L + H DL +N L+
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 191
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+ G G+S + Y G ++ + P E
Sbjct: 192 GQGLVVKIG-DFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 230
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIIL 57
+ T VAIK I + + + EI+ L H++++ + D L R VYI+
Sbjct: 67 RKTRVAIKKISPFE-HQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQ 125
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + DL ++S + ++ C F+ Q++ LK++ NV H DLKP N+LI
Sbjct: 126 DLMET-DLYKLLKSQQLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLLI 177
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 69 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 127
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 128 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 180
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 70 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 128
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 129 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 181
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 69 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 127
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 128 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 180
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C
Sbjct: 55 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWC 113
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 114 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 173
Query: 119 A--GLKQGVSEKAK--GSAYIEQ 137
GL +EK++ GS EQ
Sbjct: 174 GDFGL---ATEKSRWSGSHQFEQ 193
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 105 DA-NLXQVIQMELDHERMS-----YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 158
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 159 KI--LDFGLARTA-GTSFM 174
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAG 120
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + N +L
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKI 166
Query: 121 LKQGVS 126
L G++
Sbjct: 167 LDYGLA 172
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLXQVIQMELDHERMS-----YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 16/158 (10%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + S+N E + L L H+HIV + + ++ EY GDL
Sbjct: 46 VAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103
Query: 67 SFIRSH-------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
F+R+H +L++ Q +Q+ + +L + H DL +N L+
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE 163
Query: 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151
N L G G+S + Y G ++ + P E
Sbjct: 164 NLLVKIG-DFGMSRDVYSTDYYRVGGHTMLPIRWMPPE 200
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VAIK + + ++ E+ +K ++H++I+++L+ ++ VY+++E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 61 DGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
D +L I+ HE++S + Q++ +K L + H DLKP NI++K++ TL
Sbjct: 112 DA-NLXQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 117 KLAGLKQGVSEKAKGSAYI 135
K+ L G++ A G++++
Sbjct: 166 KI--LDFGLARTA-GTSFM 181
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + I+ ++C
Sbjct: 27 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWC 85
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 119 A--GLKQGVSEKAKGSAYIEQ 137
GL V + GS EQ
Sbjct: 146 GDFGLAT-VKSRWSGSHQFEQ 165
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 70 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 128
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 129 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 181
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 115
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + + LK+
Sbjct: 116 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 174
Query: 120 --GLKQGVSEKAKG 131
GL + +++ G
Sbjct: 175 DFGLARHTADEMTG 188
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 115
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + + LK+
Sbjct: 116 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 174
Query: 120 --GLKQGVSEKAKG 131
GL + +++ G
Sbjct: 175 DFGLARHTADEMTG 188
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 73 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 131
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 132 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 184
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 115
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + + LK+
Sbjct: 116 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 174
Query: 120 --GLKQGVSEKAKG 131
GL + +++ G
Sbjct: 175 DFGLARHTADEMTG 188
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C
Sbjct: 47 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWC 105
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 106 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 165
Query: 119 A--GLKQGVSEKAK--GSAYIEQ 137
GL +EK++ GS EQ
Sbjct: 166 GDFGL---ATEKSRWSGSHQFEQ 185
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 110
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 111 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 62 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 120
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 121 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 173
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--------VYIIL 57
+VA+K + E + + EIK L+LL H+++V +++ + +Y++
Sbjct: 45 KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVF 104
Query: 58 EYC--DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNN 114
++C D L S + LSE + + ++ L+ L ++ N + H D+K N+LI ++
Sbjct: 105 DFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 162
Query: 115 TLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
LKLA GL + S AK S N +V+ + P E+
Sbjct: 163 VLKLADFGLARAFS-LAKNSQPNRYXN-RVVTLWYRPPEL 200
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 62 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 120
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 121 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 173
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + D Y+ ++L+Y
Sbjct: 48 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYV 101
Query: 61 DGGDLCS---FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 161
Query: 118 LAGLKQGVSEK-AKGSAYIEQGNTKVICSVF 147
L G +++ +G + N ICS +
Sbjct: 162 LKLCDFGSAKQLVRG-----EPNVSXICSRY 187
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 113
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAG 120
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + N +L
Sbjct: 114 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDXELKI 171
Query: 121 LKQGVS 126
L G++
Sbjct: 172 LDFGLA 177
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 113
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAG 120
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + N +L
Sbjct: 114 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDXELKI 171
Query: 121 LKQGVS 126
L G++
Sbjct: 172 LDFGLA 177
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 61 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 119
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 120 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 172
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + + F + E +K + H ++V +L E YII E+ G+L
Sbjct: 46 VAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 67 SFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQ 123
++R + ++++ Q+ A+++L + N H DL +N L+ N L K+A
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-- 160
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLE 160
G+S G K P + +K S++
Sbjct: 161 GLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 110
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 111 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 18/160 (11%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + SE+ E + L +L HQHIV + R + ++ EY GDL
Sbjct: 45 VAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 67 SFIRSH---------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
F+RSH L Q Q+ + +L + H DL +N L+
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 162
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+ G G+S + Y G ++ + P E
Sbjct: 163 GQGLVVKIG-DFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 201
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I+ K + D ++ EI+A+ HH +IV+ + ++++++ GG +
Sbjct: 37 KVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 66 CSFIR------SHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
I+ H+ L E +R+++ L++L +N H D+K NIL+
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL 149
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 110
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 111 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 113
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 114 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ H +VA+K ++ T + + + NE+ L+ H +I+ + + + + I+ ++C
Sbjct: 27 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWC 85
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKL 118
+G L + E K + RQ + +L ++ H DLK NI + + T+K+
Sbjct: 86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 119 A--GLKQGVSEKAK--GSAYIEQ 137
GL +EK++ GS EQ
Sbjct: 146 GDFGL---ATEKSRWSGSHQFEQ 165
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 114
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 115 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 104
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 105 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 18/160 (11%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+K + + SE+ E + L +L HQHIV + R + ++ EY GDL
Sbjct: 51 VAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 67 SFIRSH---------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
F+RSH L Q Q+ + +L + H DL +N L+
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 168
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+ G G+S + Y G ++ + P E
Sbjct: 169 GQGLVVKIG-DFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 207
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 60 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 118
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 119 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 171
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 61 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 119
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 120 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 172
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 104
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 105 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 24 SIVNEIKALKLLH---HQHIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHE 73
S V E+ L+ L H ++V ++D R V ++ E+ D DL +++
Sbjct: 57 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 115
Query: 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
L + +RQ + L FL N + H DLKP+NIL+ T+KLA
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLA 162
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--------VYIIL 57
+VA+K + E + + EIK L+LL H+++V +++ + +Y++
Sbjct: 45 KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVF 104
Query: 58 EYC--DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNN 114
++C D L S + LSE + + ++ L+ L ++ N + H D+K N+LI ++
Sbjct: 105 DFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 162
Query: 115 TLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
LKLA GL + S AK S N +V+ + P E+
Sbjct: 163 VLKLADFGLARAFS-LAKNSQPNRYXN-RVVTLWYRPPEL 200
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 113
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 114 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--------VYIIL 57
+VA+K + E + + EIK L+LL H+++V +++ + +Y++
Sbjct: 44 KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVF 103
Query: 58 EYC--DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNN 114
++C D L S + LSE + + ++ L+ L ++ N + H D+K N+LI ++
Sbjct: 104 DFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 161
Query: 115 TLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
LKLA GL + S AK S N +V+ + P E+
Sbjct: 162 VLKLADFGLARAFS-LAKNSQPNRYXN-RVVTLWYRPPEL 199
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 49 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 107
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 108 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 160
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 48 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 106
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 107 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 159
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I+ K + D ++ EI+A+ HH +IV+ + ++++++ GG +
Sbjct: 42 KVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 66 CSFIR------SHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
I+ H+ L E +R+++ L++L +N H D+K NIL+
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL 154
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 115
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 116 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 168
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 7 VAIKCIDKT-KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VAIK + + K S ++ I+ E++ L+ L H + + E ++++EYC G
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSA 101
Query: 66 CSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL 116
+ H+K L E + + L +L +N+ H D+K NIL+ L
Sbjct: 102 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL 153
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 35 LHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL 94
++H +V + E +Y+IL++ GGDL + + +E + ++ +L L L L
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 95 RENNVCHFDLKPQNILI 111
+ + DLKP+NIL+
Sbjct: 147 HSLGIIYRDLKPENILL 163
>pdb|1R6M|A Chain A, Crystal Structure Of The Trna Processing Enzyme Rnase Ph
From Pseudomonas Aeruginosa In Complex With Phosphate
Length = 239
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 30/160 (18%)
Query: 129 AKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRD 188
A+GS +E G+TKVIC+V +P L+ Q +G L E+ P R+ R+
Sbjct: 25 AEGSVLVEFGDTKVICTVSAESGVPR---FLKGQ-GQGWLTAEYGMLP-----RSTGERN 75
Query: 189 SEEKELGNHLKRALEPAVCRHEFSNFQVDLFVL----------VLQNDGSALSAAINCAN 238
E G R LE +DL L V+Q DG +A+I A
Sbjct: 76 QREASRGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGAT 135
Query: 239 LALVDA-----------AIPMYDLVTSSTLALRGGLTFID 267
+AL+DA P+ +V + ++ + G+ +D
Sbjct: 136 VALIDALAVLKKRGALKGNPLKQMVAAVSVGIYQGVPVLD 175
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 73 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 131
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 132 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 184
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ ++ E +
Sbjct: 111 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 170
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 171 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 202
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 104
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 105 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 47 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 105
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 106 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 158
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 47 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 105
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 106 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 158
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 108
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 109 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 8 AIKCIDKTKVSENRFDSI-VNEIKALKLLHH---QHIVTMLDFLWDERYVYIILEYCDGG 63
A+KC+DK ++ + +++ +NE L L+ IV M + IL+ +GG
Sbjct: 217 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 276
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
DL + H SE + + +++L L+ + V + DLKP NIL+
Sbjct: 277 DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 324
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ +++ E +
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK 118
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 119 VSIAVLRGLAYLREKHQIMHRDVKPSNILVNS 150
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 8 AIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A+K + K + N D+ E L+ + H IV ++ +Y+ILEY GG+L
Sbjct: 49 AMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ E ++ ++ +AL L + + + DLKP+NI++
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML 154
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--------VYIIL 57
+VA+K + E + + EIK L+LL H+++V +++ + +Y++
Sbjct: 45 KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVF 104
Query: 58 EYC--DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNN 114
++C D L S + LSE + + ++ L+ L ++ N + H D+K N+LI ++
Sbjct: 105 DFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 162
Query: 115 TLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
LKLA GL + S AK S N +V+ + P E+
Sbjct: 163 VLKLADFGLARAFS-LAKNSQPNRYXN-RVVTLWYRPPEL 200
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 7 VAIKCIDKTKVSENRFD--SIVNEIKALKLLHHQHIVTMLDFLWDERYV-----YIILEY 59
VAIK +++ + E+ D I+ EI L L +I+ + D + E + YI+LE
Sbjct: 56 VAIKKVNR--MFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEI 113
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
D DL ++ L+E + + L+L KF+ E+ + H DLKP N L+
Sbjct: 114 ADS-DLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLL 164
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 8 AIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A+K + K + N D+ E L+ + H IV ++ +Y+ILEY GG+L
Sbjct: 49 AMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ E ++ ++ +AL L + + + DLKP+NI++
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML 154
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+ Y G+L
Sbjct: 70 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL 128
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 189 LVTENNVMKIA 199
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 8 AIKCIDKTKVSENRFDSI-VNEIKALKLLHH---QHIVTMLDFLWDERYVYIILEYCDGG 63
A+KC+DK ++ + +++ +NE L L+ IV M + IL+ +GG
Sbjct: 218 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 277
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
DL + H SE + + +++L L+ + V + DLKP NIL+
Sbjct: 278 DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 8 AIKCIDKTKVSENRFDSI-VNEIKALKLLHH---QHIVTMLDFLWDERYVYIILEYCDGG 63
A+KC+DK ++ + +++ +NE L L+ IV M + IL+ +GG
Sbjct: 218 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 277
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
DL + H SE + + +++L L+ + V + DLKP NIL+
Sbjct: 278 DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 8 AIKCIDKTKVSENRFDSI-VNEIKALKLLHH---QHIVTMLDFLWDERYVYIILEYCDGG 63
A+KC+DK ++ + +++ +NE L L+ IV M + IL+ +GG
Sbjct: 218 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 277
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
DL + H SE + + +++L L+ + V + DLKP NIL+
Sbjct: 278 DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 46 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 104
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N +
Sbjct: 105 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 164
Query: 111 IKNN-TLKLA--GLKQGVSE 127
+ + T+K+ G+ + + E
Sbjct: 165 VAEDFTVKIGDFGMTRDIXE 184
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 129
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 130 LVHQVSMGMKYLEESNFVHRDLAARNVLL 158
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 131
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLL 160
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 131
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLL 160
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 19/131 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+ Y G+L
Sbjct: 70 VAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL 128
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
++R+ E+++ QL +++L H DL +N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 110 LI-KNNTLKLA 119
L+ +NN +K+A
Sbjct: 189 LVTENNVMKIA 199
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ ++ E +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ ++ E +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ ++ E +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 115
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLL 144
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 49 DERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
D+ +Y++++Y GGDL + + E +L E + ++ ++V+A+ + + + H D+KP
Sbjct: 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPD 204
Query: 108 NILIK-NNTLKLA 119
NIL+ N ++LA
Sbjct: 205 NILMDMNGHIRLA 217
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 115
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLL 144
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 121
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 122 LVHQVSMGMKYLEESNFVHRDLAARNVLL 150
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 37 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 95
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N +
Sbjct: 96 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 155
Query: 111 IKNN-TLKLA--GLKQGVSE 127
+ + T+K+ G+ + + E
Sbjct: 156 VAEDFTVKIGDFGMTRDIXE 175
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 46 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 104
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N +
Sbjct: 105 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 164
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 165 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 196
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 109
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 110 LVHQVSMGMKYLEESNFVHRDLAARNVLL 138
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYC 60
VA+K + + S E++ LK + H++++ +LD R VY++ +
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THL 104
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 105 MGADLNNIVKC-AKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 86 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 176
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 72 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 162
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
D ++ E ++ L + +IV M+ E ++ +++E + G L +++ + + + +
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 111
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI 111
V Q+ + +K+L E+N H DL +N+L+
Sbjct: 112 LVHQVSMGMKYLEESNFVHRDLAARNVLL 140
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ ++ E +
Sbjct: 52 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 111
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 112 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 143
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 111
++ ++EY +GGDL I+S K + + +++L L+FL + + DLK NIL+
Sbjct: 93 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 152
Query: 112 KNNTLKLA 119
K+ +K+A
Sbjct: 153 KDGHIKIA 160
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 39 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 97
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N +
Sbjct: 98 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 157
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 158 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 189
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 45 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 103
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N +
Sbjct: 104 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 163
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 164 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 195
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--VYIILEYCDGGD 64
VA+K + ++R EI L+ L+H+HI+ D + +++EY G
Sbjct: 63 VAVKALKADAGPQHR-SGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS 121
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLA--GL 121
L ++ H + Q F +Q+ + +L + H DL +N+L+ N+ L K+ GL
Sbjct: 122 LRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGL 180
Query: 122 KQGVSEKAKGSAYIEQGNTKVI 143
+ V E + E G++ V
Sbjct: 181 AKAVPEGHEXYRVREDGDSPVF 202
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 122 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 212
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 116 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 206
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 43 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 101
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N +
Sbjct: 102 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 161
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 162 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 193
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 111
++ ++EY +GGDL I+S K + + +++L L+FL + + DLK NIL+
Sbjct: 94 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 153
Query: 112 KNNTLKLA 119
K+ +K+A
Sbjct: 154 KDGHIKIA 161
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 52 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 110
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N +
Sbjct: 111 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 170
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 171 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 202
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 45 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 103
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N +
Sbjct: 104 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 163
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 164 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 195
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 70 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 160
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 71 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 129
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 161
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + ++R EI L+ L+H+HI+ D E+ + +++EY G
Sbjct: 46 VAVKALKADCGPQHR-SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLA--GL 121
L ++ H + Q F +Q+ + +L + H +L +N+L+ N+ L K+ GL
Sbjct: 105 LRDYLPRH-SIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGL 163
Query: 122 KQGVSEKAKGSAYIEQGNTKVI 143
+ V E + E G++ V
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVF 185
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ ++ E +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ ++ E +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 70 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 160
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 78 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 136
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 168
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVR 85
V E+ A L IV + + + +V I +E +GG L I+ L E + ++
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 157
Query: 86 QLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
Q + L++L + H D+K N+L+ ++ + A
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAA 191
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ ++ E +
Sbjct: 76 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 135
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 136 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 167
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + ++R EI L+ L+H+HI+ D E+ + +++EY G
Sbjct: 46 VAVKALKADCGPQHR-SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLA--GL 121
L ++ H + Q F +Q+ + +L + H +L +N+L+ N+ L K+ GL
Sbjct: 105 LRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGL 163
Query: 122 KQGVSEKAKGSAYIEQGNTKVI 143
+ V E + E G++ V
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVF 185
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 72 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 162
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 54 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
Y++ E GG + S I +E + V+ + AL FL + H DLKP+NIL
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 54 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
Y++ E GG + S I +E + V+ + AL FL + H DLKP+NIL
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 77 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 135
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 167
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 52 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 110
Query: 61 DGGDLCSFIRSHEKL----------SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS S + Q ++ + +L N H DL +N +
Sbjct: 111 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 170
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 171 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82
+ I+ E++ L + +IV + + + I +E+ DGG L ++ ++ E +
Sbjct: 68 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 127
Query: 83 FVRQLVLALKFLREN-NVCHFDLKPQNILIKN 113
++ L +LRE + H D+KP NIL+ +
Sbjct: 128 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 159
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 34 LLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLAL 91
L+ +IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL
Sbjct: 82 LMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKAL 138
Query: 92 KFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPR 150
+ + H D+KP N++I + KL + G++E G Y N +V F+
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGP 194
Query: 151 EI 152
E+
Sbjct: 195 EL 196
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 39 HIVTMLDFLWDERY-----VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLAL 91
HIV ++D +++ Y + I++E DGG+L S I R + +E + + ++ + A+
Sbjct: 76 HIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 134
Query: 92 KFLRENNVCHFDLKPQNILI----KNNTLKLA 119
++L N+ H D+KP+N+L N LKL
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILKLT 166
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 74 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 132
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N +
Sbjct: 133 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 192
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 193 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 224
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 21/139 (15%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+ AIK + K S++ E++ L KL HH +I+ +L Y+Y+ +EY G+
Sbjct: 51 DAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN 109
Query: 65 LCSFIR----------------SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
L F+R + LS Q F + + +L + H +L +N
Sbjct: 110 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARN 169
Query: 109 ILIKNNTL-KLA--GLKQG 124
IL+ N + K+A GL +G
Sbjct: 170 ILVGENYVAKIADFGLSRG 188
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVR 85
V E+ A L IV + + + +V I +E +GG L I+ L E + ++
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 173
Query: 86 QLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
Q + L++L + H D+K N+L+ ++ + A
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAA 207
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 42 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 100
Query: 61 DGGDLCSFIRSHEKL----------SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS S + Q ++ + +L N H DL +N +
Sbjct: 101 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 160
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 161 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 192
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
Query: 2 EQHTE--VAIKCIDKTKVSENRFD--SIVNEIKALKLLHHQHIVTMLDFL-------WDE 50
+++TE VAIK +++ + E+ D I+ EI L L +I+ + D + +DE
Sbjct: 47 DKNTEKNVAIKKVNR--MFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104
Query: 51 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
+YI+LE D DL ++ L+E + + L+L F+ E+ + H DLKP N L
Sbjct: 105 --LYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCL 161
Query: 111 I 111
+
Sbjct: 162 L 162
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVR 85
V E+ A L IV + + + +V I +E +GG L I+ L E + ++
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 171
Query: 86 QLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
Q + L++L + H D+K N+L+ ++ + A
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAA 205
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+T VA+K + K S + +++E LK ++H H++ + + + +I+EY G
Sbjct: 53 YTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 64 DLCSFIRSHEK------------------------LSEFQCQQFVRQLVLALKFLRENNV 99
L F+R K L+ F Q+ +++L E +
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL 171
Query: 100 CHFDLKPQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKV 142
H DL +NIL+ + +K++ GL + V E+ +Y+++ ++
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEE---DSYVKRSQGRI 214
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 39 HIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
+IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL +
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 164
Query: 97 NNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 165 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPEL 217
>pdb|3HTM|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
Spopbtb3-Box
pdb|3HTM|B Chain B, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
Spopbtb3-Box
pdb|3HTM|C Chain C, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
Spopbtb3-Box
pdb|3HTM|D Chain D, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
Spopbtb3-Box
Length = 172
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Query: 354 SGLW-----SDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCE--KGDTKILDI 406
GLW +DC V +EF+AHK IL+ SPVF+ F E E K +I D+
Sbjct: 26 GGLWENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAXFEHEXEESKKNRVEINDV 81
Query: 407 TPEAF 411
PE F
Sbjct: 82 EPEVF 86
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 39 HIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
+IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 97 NNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPEL 196
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 39 HIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
+IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL +
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 144
Query: 97 NNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPEL 197
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDF------LWDERYVYIILEY 59
++A+K + + S E++ LK + H++++ +LD L + VY++ +
Sbjct: 78 KIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLV-TH 136
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + +
Sbjct: 137 LMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 190
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 39 HIVTMLDF---LWDERYVYIILEYC-DGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALK 92
HIV ++D L+ R +I+ C DGG+L S I R + +E + + + + A++
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 93 FLRENNVCHFDLKPQNILI----KNNTLKLA 119
+L N+ H D+KP+N+L N LKL
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLT 206
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 39 HIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
+IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL +
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 145
Query: 97 NNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 146 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPEL 198
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 39 HIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
+IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL +
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 144
Query: 97 NNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPEL 197
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 8 AIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILEYCDGGD 64
AIK + K V ++ + + E + L LL +T L F +R +Y ++EY +GGD
Sbjct: 48 AIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDR-LYFVMEYVNGGD 106
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L I+ K E Q + ++ + L FL + + + DLK N+++
Sbjct: 107 LMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVML 153
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 39 HIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
+IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 97 NNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPEL 196
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+Y +L+Y +GG+L ++ E + + + ++ AL +L N+ + DLKP+NIL+
Sbjct: 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL 172
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 47/241 (19%)
Query: 21 RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSE-FQ 79
++D NE++ + + +++ +T + + VYII EY + + F L + +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 80 C-------QQFVRQLVLALKFL-RENNVCHFDLKPQNILI-KNNTLKLAGLKQG---VSE 127
C + ++ ++ + ++ E N+CH D+KP NIL+ KN +KL+ + V +
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 128 KAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGE-------LYVEF-KFAPFA- 178
K KGS +G + F P E S+++S Y +K + LYV F PF+
Sbjct: 206 KIKGS----RGTYE-----FMPPEFFSNESS--YNGAKVDIWSLGICLYVMFYNVVPFSL 254
Query: 179 --------SQIRTGWLRDSEEKELGNHLKRAL--EPAVCRHEF-SNFQVDLFVLVLQNDG 227
+ IRT ++ E NH L + + C + F SN +D L L+ +
Sbjct: 255 KISLVELFNNIRT---KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNP 311
Query: 228 S 228
+
Sbjct: 312 A 312
>pdb|1R6L|A Chain A, Crystal Structure Of The Trna Processing Enzyme Rnase Ph
From Pseudomonas Aeruginosa
Length = 239
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 129 AKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRD 188
A+GS +E G+TKVIC+V +P L+ Q +G L E+ P R+ R+
Sbjct: 25 AEGSVLVEFGDTKVICTVSAESGVPR---FLKGQ-GQGWLTAEYGXLP-----RSTGERN 75
Query: 189 SEEKELGNHLKRALEPAVCRHEFSNFQVDLFVL----------VLQNDGSALSAAINCAN 238
E G R LE +DL L V+Q DG +A+I A
Sbjct: 76 QREASRGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGAT 135
Query: 239 LALVDA 244
+AL+DA
Sbjct: 136 VALIDA 141
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 28/152 (18%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+T VA+K + K S + +++E LK ++H H++ + + + +I+EY G
Sbjct: 53 YTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 64 DLCSFIRSHEK------------------------LSEFQCQQFVRQLVLALKFLRENNV 99
L F+R K L+ F Q+ +++L E ++
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSL 171
Query: 100 CHFDLKPQNILI-KNNTLKLA--GLKQGVSEK 128
H DL +NIL+ + +K++ GL + V E+
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + L+HQ+IV + +I+LE GGDL
Sbjct: 63 QVAVKTLPEVCSEQDELDFLM-EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 181
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 39 HIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
+IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 97 NNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPEL 196
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 39 HIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
+IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 97 NNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPEL 196
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 39 HIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 96
+IV +LD + D+ + +I EY + D F + L+++ + ++ +L+ AL +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 97 NNVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPEL 196
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + L+HQ+IV + +I+LE GGDL
Sbjct: 77 QVAVKTLPEVCSEQDELDFLM-EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDL 135
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 195
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 53 VYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI- 109
++I +E+CD G L +I R EKL + + Q+ + ++ + H DLKP NI
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 110 LIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPS 154
L+ +K+ S K G +G + + P +I S
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMS----PEQISS 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+T VA+K + K S + +++E LK ++H H++ + + + +I+EY G
Sbjct: 53 YTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 64 DLCSFIRSHEK------------------------LSEFQCQQFVRQLVLALKFLRENNV 99
L F+R K L+ F Q+ +++L E +
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL 171
Query: 100 CHFDLKPQNILI-KNNTLKLA--GLKQGVSEK 128
H DL +NIL+ + +K++ GL + V E+
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
++ +VAIK + K + + ++ E + + L + +IV ++ E + +++E
Sbjct: 35 KKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAG 92
Query: 62 GGDLCSF-IRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
GG L F + E++ + + Q+ + +K+L E N H DL +N+L+ N
Sbjct: 93 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN 145
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK + E+ I+ EI ++ H+V + ++I++EYC G +
Sbjct: 57 VAIKQVP----VESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112
Query: 67 SFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
IR K L+E + ++ + L++L H D+K NIL+
Sbjct: 113 DIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL 158
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVR 85
E+ A L IV + + + +V I +E +GG L ++ L E + ++
Sbjct: 133 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG 192
Query: 86 QLVLALKFLRENNVCHFDLKPQNILIKNN 114
Q + L++L + H D+K N+L+ ++
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLLSSD 221
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 21/162 (12%)
Query: 7 VAIKCI-DKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + D T + F E + L L H+HIV D + ++ EY GDL
Sbjct: 48 VAVKALKDPTLAARKDFQ---REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL 104
Query: 66 CSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
F+R+H +L Q Q+ + +L + H DL +N
Sbjct: 105 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNC 164
Query: 110 LIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151
L+ N L G G+S + Y G ++ + P E
Sbjct: 165 LVGANLLVKIG-DFGMSRDVYSTDYYRVGGHTMLPIRWMPPE 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E T VA+K ++++ R + +NE +K H+V +L + + +++E
Sbjct: 44 GEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 61 DGGDLCSFIRSHEKLSEF----------QCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS +E + Q ++ + +L H DL +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 162
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ ++ T+K+ G++ +AY +G ++
Sbjct: 163 VAHDFTVKIGDF--GMTRDIYETAYYRKGGKGLL 194
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK +++ R + +NE +K + H+V +L + + +I+E
Sbjct: 39 DEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 97
Query: 61 DGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS E + Q ++ + +L N H DL +N
Sbjct: 98 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCX 157
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ + T+K+ G++ + Y +G ++
Sbjct: 158 VAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 189
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+ VA+K K +N+ + ++E +K L H HIV ++ + +E +II+E
Sbjct: 51 EKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPY 108
Query: 63 GDLCSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAG 120
G+L ++ R+ L + Q+ A+ +L N H D+ +NIL+ + +KL
Sbjct: 109 GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGD 168
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
G+S + Y + T++ P I
Sbjct: 169 F--GLSRYIEDEDYYKASVTRLPIKWMSPESI 198
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I+LE GGDL
Sbjct: 63 QVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 181
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G+++ ++Y +G ++ + P E
Sbjct: 182 VAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPE 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVR 85
E+ A L IV + + + +V I +E +GG L ++ L E + ++
Sbjct: 114 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG 173
Query: 86 QLVLALKFLRENNVCHFDLKPQNILIKNN 114
Q + L++L + H D+K N+L+ ++
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLLSSD 202
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + + R EI+ L+ L+H+HIV D E+ V +++EY G
Sbjct: 41 VAVKALKEGCGPQLR-SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 99
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLA--GL 121
L ++ H + Q F +Q+ + +L + H L +N+L+ N+ L K+ GL
Sbjct: 100 LRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGL 158
Query: 122 KQGVSEKAKGSAYIEQGNTKVI 143
+ V E + E G++ V
Sbjct: 159 AKAVPEGHEYYRVREDGDSPVF 180
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I+ SE+ + + E++ L ++H +IV + + V +++EY +GG L
Sbjct: 34 DVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSL 87
Query: 66 CSFIRSHEKLSEF-------QCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + E L + C Q Q V L ++ + H DLKP N+L+
Sbjct: 88 YNVLHGAEPLPYYTAAHAMSWCLQ-CSQGVAYLHSMQPKALIHRDLKPPNLLL 139
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 35/59 (59%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ ++E+ +GGDL I+ + E + + + +++ AL FL + + + DLK N+L+
Sbjct: 99 LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL 157
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
++ EY + D F + ++ L++F + ++ +L+ AL + + H D+KP N++I +
Sbjct: 112 LVFEYINNTD---FKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 115 TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
KL + G++E + ++ N +V F+ E+
Sbjct: 169 QKKLRLIDWGLAEFYHPA---QEYNVRVASRYFKGPEL 203
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+ VA+K K +N+ + ++E +K L H HIV ++ + +E +II+E
Sbjct: 39 EKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPY 96
Query: 63 GDLCSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAG 120
G+L ++ R+ L + Q+ A+ +L N H D+ +NIL+ + +KL
Sbjct: 97 GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGD 156
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
G+S + Y + T++ P I
Sbjct: 157 F--GLSRYIEDEDYYKASVTRLPIKWMSPESI 186
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 37 HQHIVTMLDFLW-----DERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLA 90
H IV + +F+ + YI++EY G S RS +KL + ++ +++ A
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGG---QSLKRSKGQKLPVAEAIAYLLEILPA 194
Query: 91 LKFLRENNVCHFDLKPQNILIKNNTLKL 118
L +L + + DLKP+NI++ LKL
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTEEQLKL 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK I+ SE+ + + E++ L ++H +IV + + V +++EY +GG L
Sbjct: 33 DVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSL 86
Query: 66 CSFIRSHEKLSEF-------QCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + E L + C Q Q V L ++ + H DLKP N+L+
Sbjct: 87 YNVLHGAEPLPYYTAAHAMSWCLQ-CSQGVAYLHSMQPKALIHRDLKPPNLLL 138
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGD 64
VA+K + + + R EI+ L+ L+H+HIV D E+ V +++EY G
Sbjct: 40 VAVKALKEGCGPQLR-SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 98
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLA--GL 121
L ++ H + Q F +Q+ + +L + H L +N+L+ N+ L K+ GL
Sbjct: 99 LRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGL 157
Query: 122 KQGVSEKAKGSAYIEQGNTKVI 143
+ V E + E G++ V
Sbjct: 158 AKAVPEGHEYYRVREDGDSPVF 179
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+ VA+K K +N+ + ++E +K L H HIV ++ + +E +II+E
Sbjct: 35 EKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPY 92
Query: 63 GDLCSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAG 120
G+L ++ R+ L + Q+ A+ +L N H D+ +NIL+ + +KL
Sbjct: 93 GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGD 152
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
G+S + Y + T++ P I
Sbjct: 153 F--GLSRYIEDEDYYKASVTRLPIKWMSPESI 182
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
++ +VAIK + K + + ++ E + + L + +IV ++ E + +++E
Sbjct: 360 RKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMA 417
Query: 61 DGGDLCSF-IRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
GG L F + E++ + + Q+ + +K+L E N H +L +N+L+ N
Sbjct: 418 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNR 472
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I+LE GGDL
Sbjct: 77 QVAVKTLPEVYSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 135
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 195
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
++ EY + D F + ++ L++F + ++ +L+ AL + + H D+KP N++I +
Sbjct: 117 LVFEYINNTD---FKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 115 TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
KL + G++E + ++ N +V F+ E+
Sbjct: 174 QKKLRLIDWGLAEFYHPA---QEYNVRVASRYFKGPEL 208
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYI 55
N VAIK I + + + EIK L H++I+ + D + + VY+
Sbjct: 65 NVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL 123
Query: 56 ILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+ + G DL +++ ++ C F+ Q++ LK++ NV H DLKP N+L+ N T
Sbjct: 124 V-THLMGADLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTT 180
Query: 116 LKLAGLKQGVSEKA 129
L G++ A
Sbjct: 181 XDLKICDFGLARVA 194
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 111
++II+EY GG +R+ EFQ +++++ L +L H D+K N+L+
Sbjct: 96 LWIIMEYLGGGSALDLLRAGP-FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS 154
Query: 112 KNNTLKLA 119
+ +KLA
Sbjct: 155 EQGDVKLA 162
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I+LE GGDL
Sbjct: 63 QVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 181
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDL 65
A+K I+ T +S S EI L+ L H +++++ +R V+++ +Y + DL
Sbjct: 52 ALKQIEGTGISM----SACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DL 106
Query: 66 CSFIRSHE---------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
I+ H +L + + Q++ + +L N V H DLKP NIL+
Sbjct: 107 WHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILV 161
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 32 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 89
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 90 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGE 149
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 150 LKLIDFGSGALLKDTVYTDFDGTRV 174
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I+LE GGDL
Sbjct: 54 QVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 112
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 113 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 172
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 173 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 207
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH-QHIVTMLDFLWDE--RYVYIIL 57
NE+ +K + K K+ EIK L+ L +I+T+ D + D R ++
Sbjct: 62 NEKVVVKILKPVKKNKIKR--------EIKILENLRGGPNIITLADIVKDPVSRTPALVF 113
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I + K
Sbjct: 114 EHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK 170
Query: 118 LAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
L + G++E G Y N +V F+ E+
Sbjct: 171 LRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I+LE GGDL
Sbjct: 80 QVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 138
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 139 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 198
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ + Y +G ++ + P E
Sbjct: 199 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 233
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I+LE GGDL
Sbjct: 69 QVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 127
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 128 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 187
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 188 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 222
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I+LE GGDL
Sbjct: 62 QVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 120
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 180
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
>pdb|1OYS|A Chain A, Crystal Structure Of The Phosphorolytic Exoribonuclease
Rnase Ph From Bacillus Subtilis
Length = 245
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 130 KGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYV--EFKFAPFASQIRTGWLR 187
+GS I GNTKVIC+ +P + R G+ ++ E+ P A+ +T ++
Sbjct: 25 EGSVLITAGNTKVICNASVEDRVPP------FLRGGGKGWITAEYSMLPQATNQQT--IQ 76
Query: 188 DSEEKELGNH-------LKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
+S + ++ + RAL V + + + V+Q DG +A+I A LA
Sbjct: 77 ESSKGKISGRTMEIQRLIGRALRAVVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLA 136
Query: 241 LVDAAIPMYDLVTSSTL 257
+ AI + L+ + T+
Sbjct: 137 M---AIAIGKLIKAGTI 150
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ + K +HQ+IV + +I+LE GGDL
Sbjct: 89 QVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDL 147
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 148 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 207
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 208 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 242
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ + K +HQ+IV + +I+LE GGDL
Sbjct: 79 QVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDL 137
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 138 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 197
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 198 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 232
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 25/147 (17%)
Query: 28 EIKALKLLHHQHIVTMLDFLWD-----------------ERYVYIILEYCDGGDLCSFI- 69
E+KAL L H +IV + WD + ++I +E+CD G L +I
Sbjct: 54 EVKALAKLDHVNIV-HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112
Query: 70 -RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKNNTLKLAGLKQGVSE 127
R EKL + + Q+ + ++ + + DLKP NI L+ +K+ S
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Query: 128 KAKGSAYIEQGNTKVICSVFEPREIPS 154
K G +G + + P +I S
Sbjct: 173 KNDGKRXRSKGTLRYMS----PEQISS 195
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 23 DSIVNEIKALKLLHHQHIVTMLDFLWDER-------------YVYIILEYCDGGDLCSFI 69
+ ++ E+KAL L H IV + W E+ Y+YI ++ C +L ++
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFN-AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106
Query: 70 RSHEKLSEFQ---CQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ E + C Q+ A++FL + H DLKP NI
Sbjct: 107 NGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF 151
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I+LE GGDL
Sbjct: 103 QVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 161
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 162 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 221
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ + Y +G ++ + P E
Sbjct: 222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 256
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYV------YIILEY 59
+VAIK + + SE E+ LK + H++++ +LD + Y+++ +
Sbjct: 51 KVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPF 110
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
DL + K SE + Q V Q++ LK++ V H DLKP N+ + +
Sbjct: 111 MQT-DLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED 162
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 36 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 93
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 94 RMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 153
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 154 LKLIDFGSGALLKDTVYTDFDGTRV 178
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
++VA+K + + R + + E+ +K L H +IV + + + I+ EY G
Sbjct: 61 SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120
Query: 65 LCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENN--VCHFDLKPQNILI-KNNTLKL 118
L + + E+L E + + + +L N + H DLK N+L+ K T+K+
Sbjct: 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKV 180
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 64 DLCSFIRSHEK--------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
+L +++RS L C F Q+ ++FL H DL +NI
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF--QVAKGMEFLASRKXIHRDLAARNI 175
Query: 110 LI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
L+ + N +K+ GL + + K Y+ +G+ ++ P I
Sbjct: 176 LLSEKNVVKICDFGLARDIY---KDPDYVRKGDARLPLKWMAPETI 218
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 71 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 128
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 129 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 188
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 189 LKLIDFGSGALLKDTVYTDFDGTRV 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 32 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 89
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 90 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 149
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 150 LKLIDFGSGALLKDTVYTDFDGTRV 174
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 32 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 89
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 90 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 149
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 150 LKLIDFGSGALLKDTVYTDFDGTRV 174
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 36 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 93
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 94 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 153
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 154 LKLIDFGSGALLKDTVYTDFDGTRV 178
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 51 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 108
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 109 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 168
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 169 LKLIDFGSGALLKDTVYTDFDGTRV 193
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 37 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 94
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 95 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 154
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 155 LKLIDFGSGALLKDTVYTDFDGTRV 179
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 52 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 109
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 110 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 169
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 170 LKLIDFGSGALLKDTVYTDFDGTRV 194
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I++E GGDL
Sbjct: 77 QVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDL 135
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 195
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 51 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 108
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 109 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 168
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 169 LKLIDFGSGALLKDTVYTDFDGTRV 193
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 84 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 141
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 142 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 201
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 202 LKLIDFGSGALLKDTVYTDFDGTRV 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 52 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 109
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 110 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 169
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 170 LKLIDFGSGALLKDTVYTDFDGTRV 194
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K + + ++ D ++ E + +HQ+IV + +I++E GGDL
Sbjct: 62 QVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDL 120
Query: 66 CSFIRSHEK-------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
SF+R L+ R + ++L EN+ H D+ +N L+ +
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 180
Query: 118 LAGLKQ-GVSEKAKGSAYIEQGNTKVICSVFEPRE 151
+A + G++ ++Y +G ++ + P E
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 65 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 122
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 123 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 182
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 183 LKLIDFGSGALLKDTVYTDFDGTRV 207
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 64 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 121
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 122 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 181
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 182 LKLIDFGSGALLKDTVYTDFDGTRV 206
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 52 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 109
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 110 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 169
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 170 LKLIDFGSGALLKDTVYTDFDGTRV 194
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 65 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 122
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 123 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 182
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 183 LKLIDFGSGALLKDTVYTDFDGTRV 207
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 37 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 94
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 95 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 154
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 155 LKLIDFGSGALLKDTVYTDFDGTRV 179
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 35 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 92
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 93 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 152
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 153 LKLIDFGSGALLKDTVYTDFDGTRV 177
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 37 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 94
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 95 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 154
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 155 LKLIDFGSGALLKDTVYTDFDGTRV 179
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 65 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 122
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 123 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 182
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 183 LKLIDFGSGALLKDTVYTDFDGTRV 207
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 64 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 121
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 122 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 181
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 182 LKLIDFGSGALLKDTVYTDFDGTRV 206
>pdb|4AID|A Chain A, Crystal Structure Of C. Crescentus Pnpase Bound To Rnase E
Recognition Peptide
pdb|4AID|B Chain B, Crystal Structure Of C. Crescentus Pnpase Bound To Rnase E
Recognition Peptide
pdb|4AID|C Chain C, Crystal Structure Of C. Crescentus Pnpase Bound To Rnase E
Recognition Peptide
Length = 726
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 124 GVSEKAKGSAYIEQGNTK-VICSVFEPREIPSSKTSLE--YQRSKGELYVEFKFAPFASQ 180
G+ + GSA +G T+ ++ + + +LE Y+ S + + F P+ S
Sbjct: 348 GILPRTHGSALFTRGETQAIVVATLGTGDDEQFIDALEGTYKES---FLLHYNFPPY-SV 403
Query: 181 IRTGWLRDSEEKELGNHLK---RALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCA 237
TG + +E+G H K RAL P + E + + L + +++GS+ A + +
Sbjct: 404 GETGRMGSPGRREIG-HGKLAWRALRPMLPTKEDFPYTIRLVSEITESNGSSSMATVCGS 462
Query: 238 NLALVDAAIPMYDLVTSSTLAL 259
+LA++DA +P+ V+ + L
Sbjct: 463 SLAMMDAGVPLVRPVSGIAMGL 484
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 64 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 121
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 122 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 181
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 182 LKLIDFGSGALLKDTVYTDFDGTRV 206
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 65 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 122
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 123 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 182
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 183 LKLIDFGSGALLKDTVYTDFDGTRV 207
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 136
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 137 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 196
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 197 LKLIDFGSGALLKDTVYTDFDGTRV 221
>pdb|4AM3|A Chain A, Crystal Structure Of C. Crescentus Pnpase Bound To Rna
pdb|4AM3|B Chain B, Crystal Structure Of C. Crescentus Pnpase Bound To Rna
pdb|4AM3|C Chain C, Crystal Structure Of C. Crescentus Pnpase Bound To Rna
Length = 717
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 124 GVSEKAKGSAYIEQGNTK-VICSVFEPREIPSSKTSLE--YQRSKGELYVEFKFAPFASQ 180
G+ + GSA +G T+ ++ + + +LE Y+ S + + F P+ S
Sbjct: 339 GILPRTHGSALFTRGETQAIVVATLGTGDDEQFIDALEGTYKES---FLLHYNFPPY-SV 394
Query: 181 IRTGWLRDSEEKELGNHLK---RALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCA 237
TG + +E+G H K RAL P + E + + L + +++GS+ A + +
Sbjct: 395 GETGRMGSPGRREIG-HGKLAWRALRPMLPTKEDFPYTIRLVSEITESNGSSSMATVCGS 453
Query: 238 NLALVDAAIPMYDLVTSSTLAL 259
+LA++DA +P+ V+ + L
Sbjct: 454 SLAMMDAGVPLVRPVSGIAMGL 475
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 136
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 137 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 196
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 197 LKLIDFGSGALLKDTVYTDFDGTRV 221
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 64 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 121
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 122 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 181
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 182 LKLIDFGSGALLKDTVYTDFDGTRV 206
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 59 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 116
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 117 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 176
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 177 LKLIDFGSGALLKDTVYTDFDGTRV 201
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
Q + QL A+KFL +N + H DLKP+NIL N+ +L
Sbjct: 138 QVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT 178
>pdb|4AIM|A Chain A, Crystal Structure Of C. Crescentus Pnpase Bound To Rnase E
Recognition Peptide
Length = 726
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 124 GVSEKAKGSAYIEQGNTK-VICSVFEPREIPSSKTSLE--YQRSKGELYVEFKFAPFASQ 180
G+ + GSA +G T+ ++ + + +LE Y+ S + + F P+ S
Sbjct: 348 GILPRTHGSALFTRGETQAIVVATLGTGDDEQFIDALEGTYKES---FLLHYNFPPY-SV 403
Query: 181 IRTGWLRDSEEKELGNHLK---RALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCA 237
TG + +E+G H K RAL P + E + + L + +++GS+ A + +
Sbjct: 404 GETGRMGSPGRREIG-HGKLAWRALRPMLPTKEDFPYTIRLVSEITESNGSSSMATVCGS 462
Query: 238 NLALVDAAIPMYDLVTSSTLAL 259
+LA++DA +P+ V+ + L
Sbjct: 463 SLAMMDAGVPLVRPVSGIAMGL 484
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 7 VAIKCIDKTKVSE----NRFDSIVNEIKALKLLH--HQHIVTMLDFLWDER---YVYIIL 57
VAIK ++K ++S+ + E+ LK + ++ +LD W ER +V I+
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD--WFERPDSFVLILE 136
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
DL FI L E + F Q++ A++ V H D+K +NILI N +
Sbjct: 137 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 196
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTKV 142
L + G K + Y + T+V
Sbjct: 197 LKLIDFGSGALLKDTVYTDFDGTRV 221
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N+LI + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYI 55
N VAIK I + + + EIK L H++I+ + D + + VYI
Sbjct: 49 NLNKVRVAIKKISPFE-HQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107
Query: 56 ILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+ + + DL +++ ++ C F+ Q++ LK++ NV H DLKP N+L+ N T
Sbjct: 108 VQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTT 164
Query: 116 LKLAGLKQGVSEKA 129
L G++ A
Sbjct: 165 XDLKICDFGLARVA 178
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
V IK I+ K F ++ + + A+ L H HIV +L L + ++ +Y G L
Sbjct: 45 VCIKVIED-KSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLL 102
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+R H L + Q+ + +L E+ + H +L +N+L+K+ +
Sbjct: 103 DHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS 152
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYV------YIILEY 59
+VAIK + + SE E+ LK + H++++ +LD + Y+++ +
Sbjct: 69 KVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPF 128
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
DL + + SE + Q V Q++ LK++ V H DLKP N+ + +
Sbjct: 129 MQT-DLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED 180
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 127
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 128 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTXDLKIXDFGLARVA 174
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
V IK I+ K F ++ + + A+ L H HIV +L L + ++ +Y G L
Sbjct: 63 VCIKVIED-KSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLL 120
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+R H L + Q+ + +L E+ + H +L +N+L+K+ +
Sbjct: 121 DHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS 170
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 27/166 (16%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 64 DLCSFIRSHEKLSEFQCQQ--------------FVRQLVLALKFLRENNVCHFDLKPQNI 109
+L +++RS K +EF + + Q+ ++FL H DL +NI
Sbjct: 118 NLSTYLRS--KRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNI 175
Query: 110 LI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
L+ + N +K+ GL + + K Y+ +G+ ++ P I
Sbjct: 176 LLSEKNVVKIXDFGLARDIY---KDPDYVRKGDARLPLKWMAPETI 218
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYI 55
N VAIK I + + + EIK L H++I+ + D + + VYI
Sbjct: 47 NVNKVRVAIKKISPFE-HQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYI 105
Query: 56 ILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+ + + DL +++ ++ C F+ Q++ LK++ NV H DLKP N+L+ +
Sbjct: 106 VQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTS 163
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 25 IVNEIKALKLLHHQHIVTMLDFL--WDE---RYVYIILEYCDGGDLCSFIRSHE-KLSEF 78
++ EI+ L HH +I+ + D ++E +Y++ E DL I +S
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQ 134
Query: 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
Q F+ ++L L L E V H DL P NIL+ +N
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN 170
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 25 IVNEIKALKLLHHQHIVTMLDFL--WDE---RYVYIILEYCDGGDLCSFIRSHE-KLSEF 78
++ EI+ L HH +I+ + D ++E +Y++ E DL I +S
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQ 134
Query: 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
Q F+ ++L L L E V H DL P NIL+ +N
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN 170
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+Y ++EY +GGDL I+ + E + ++ + L FL+ + + DLK N+++
Sbjct: 96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 154
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E T VA+K ++++ R + +NE +K H+V +L + + +++E
Sbjct: 43 GEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 101
Query: 61 DGGDLCSFIRSHEKLSEF----------QCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS +E + Q ++ + +L H DL +N +
Sbjct: 102 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 161
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ ++ T+K+ G++ + Y +G ++
Sbjct: 162 VAHDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 193
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 113
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 85 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 144
Query: 114 NTLKLA--GL-KQGVSEKA 129
+K+ GL K+G+S+ A
Sbjct: 145 GHIKITDFGLCKEGISDGA 163
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E T VA+K ++++ R + +NE +K H+V +L + + +++E
Sbjct: 44 GEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 61 DGGDLCSFIRSHEKLSEF----------QCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS +E + Q ++ + +L H DL +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 162
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ ++ T+K+ G++ + Y +G ++
Sbjct: 163 VAHDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 194
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
++VA+K + + R + + E+ +K L H +IV + + + I+ EY G
Sbjct: 61 SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120
Query: 65 LCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENN--VCHFDLKPQNILI-KNNTLKL 118
L + + E+L E + + + +L N + H +LK N+L+ K T+K+
Sbjct: 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV 180
Query: 119 AGLKQGVSEKAKGSAYIEQGNTKVICSVFEP---REIPSSKTSLEY 161
G+S + K S ++ + P R+ PS++ S Y
Sbjct: 181 CDF--GLS-RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVY 223
>pdb|3KRN|A Chain A, Crystal Structure Of C. Elegans Cell-Death-Related
Nuclease 5(Crn-5)
pdb|3KRN|B Chain B, Crystal Structure Of C. Elegans Cell-Death-Related
Nuclease 5(Crn-5)
Length = 222
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 127 EKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWL 186
+ A GSA QG T + S P ++ +SK S E L + ++
Sbjct: 16 KNADGSACFSQGATCIWASCSGPGDVHASKASDEAMT----LDISYRAN----------C 61
Query: 187 RDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAI 246
D++ L N + L A+ F + + + V +Q+DGS + AIN A AL+D +
Sbjct: 62 GDNKFNVLNNIIHSTLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDNGM 121
Query: 247 PMYDLVTSSTLALR-GGLTFIDPVEEEVA 274
P ++ V L +R IDP ++ A
Sbjct: 122 P-FETVFCGVLIVRVKDELIIDPTAKQEA 149
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 113
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 114 NTLKLA--GL-KQGVSEKA 129
+K+ GL K+G+S+ A
Sbjct: 142 GHIKITDFGLCKEGISDGA 160
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 99 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 155
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 156 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 207
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E T VA+K ++++ R + +NE +K H+V +L + + +++E
Sbjct: 41 GEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 99
Query: 61 DGGDLCSFIRSHEKLSEF----------QCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS +E + Q ++ + +L H DL +N +
Sbjct: 100 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 159
Query: 111 IKNN-TLKLA--GLKQGVSE 127
+ ++ T+K+ G+ + + E
Sbjct: 160 VAHDFTVKIGDFGMTRDIXE 179
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E T VA+K ++++ R + +NE +K H+V +L + + +++E
Sbjct: 44 GEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 61 DGGDLCSFIRSHEKLSEF----------QCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS +E + Q ++ + +L H DL +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 162
Query: 111 IKNN-TLKLA--GLKQGVSE 127
+ ++ T+K+ G+ + + E
Sbjct: 163 VAHDFTVKIGDFGMTRDIXE 182
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 113
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 114 NTLKLA--GL-KQGVSEKA 129
+K+ GL K+G+S+ A
Sbjct: 142 GHIKITDFGLCKEGISDGA 160
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 149
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 201
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYI 55
N VAIK I + + + EIK L H++I+ + D + + VYI
Sbjct: 47 NVNKVRVAIKKISPFE-HQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYI 105
Query: 56 ILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+ + + DL +++ ++ C F+ Q++ LK++ NV H DLKP N+L+ N T
Sbjct: 106 VQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTT 162
Query: 116 LKLAGLKQGVSEKA 129
L G++ A
Sbjct: 163 CDLKICDFGLARVA 176
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+Y ++EY +GGDL I+ + E + ++ + L FL+ + + DLK N+++
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 475
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 6 EVAIKCIDKTKV--SENRFDSIVNEIKALKLLH------HQHIVTMLDFLWDERYVYIIL 57
+VAIK I + +V DS+ ++ L H ++ +LD+ + ++L
Sbjct: 58 QVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVL 117
Query: 58 EY-CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
E DL +I L E + F Q+V A++ V H D+K +NILI
Sbjct: 118 ERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 113
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 87 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 146
Query: 114 NTLKLA--GL-KQGVSEKA 129
+K+ GL K+G+S+ A
Sbjct: 147 GHIKITDFGLCKEGISDGA 165
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E T VA+K ++++ R + +NE +K H+V +L + + +++E
Sbjct: 44 GEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 61 DGGDLCSFIRSHEKLSEF----------QCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS +E + Q ++ + +L H DL +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 162
Query: 111 IKNN-TLKLA--GLKQGVSE 127
+ ++ T+K+ G+ + + E
Sbjct: 163 VAHDFTVKIGDFGMTRDIXE 182
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 127
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 128 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTXDLKICDFGLARVA 174
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 113
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 114 NTLKLA--GL-KQGVSEKA 129
+K+ GL K+G+S+ A
Sbjct: 142 GHIKITDFGLCKEGISDGA 160
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 148
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 200
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + ++ L+++ + ++ +++ AL +
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSM 149
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 201
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 131
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 132 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTXDLKICDFGLARVA 178
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 113
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 114 NTLKLA--GL-KQGVSEKA 129
+K+ GL K+G+S+ A
Sbjct: 142 GHIKITDFGLCKEGISDGA 160
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 113
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 114 NTLKLA--GL-KQGVSEKA 129
+K+ GL K+G+S+ A
Sbjct: 142 GHIKITDFGLCKEGISDGA 160
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 127
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 128 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTXDLKICDFGLARVA 174
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYI 55
N VAIK I + + + EIK L H++I+ + D + + VYI
Sbjct: 65 NVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 123
Query: 56 ILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+ + + DL +++ ++ C F+ Q++ LK++ NV H DLKP N+L+ N T
Sbjct: 124 VQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTT 180
Query: 116 LKLAGLKQGVSEKA 129
L G++ A
Sbjct: 181 CDLKICDFGLARVA 194
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 86 QLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
QL AL+FL EN + H DLKP+NIL N+ +
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVNSEFE 194
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
EQ VAIK + K K + +E L H ++V +L + ++ + +I YC
Sbjct: 36 GEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 94
Query: 61 DGGDLCSFI---RSHEKL----------SEFQCQQFVR---QLVLALKFLRENNVCHFDL 104
GDL F+ H + S + FV Q+ +++L ++V H DL
Sbjct: 95 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDL 154
Query: 105 KPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIE-QGNTKVICSVFEPREIPSSKTSLE 160
+N+L+ + +K++ L G+ + + Y + GN+ + P I K S++
Sbjct: 155 ATRNVLVYDKLNVKISDL--GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID 210
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 86 QLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
QL AL+FL EN + H DLKP+NIL N+ +
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVNSEFE 171
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYI 55
N VAIK I + + + EIK L H++I+ + D + + VYI
Sbjct: 47 NVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 105
Query: 56 ILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+ + + DL +++ ++ C F+ Q++ LK++ NV H DLKP N+L+ N T
Sbjct: 106 VQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTT 162
Query: 116 LKLAGLKQGVSEKA 129
L G++ A
Sbjct: 163 CDLKICDFGLARVA 176
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD-----ERYVYI 55
E EVA + K++++ E + LK L H +IV D W+ ++ + +
Sbjct: 48 TETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD-SWESTVKGKKCIVL 106
Query: 56 ILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL--RENNVCHFDLKPQNILIKN 113
+ E G L ++++ + + + RQ++ L+FL R + H DLK NI I
Sbjct: 107 VTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG 166
Query: 114 NT-------LKLAGLKQGVSEKA 129
T L LA LK+ KA
Sbjct: 167 PTGSVKIGDLGLATLKRASFAKA 189
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
EQ VAIK + K K + +E L H ++V +L + ++ + +I YC
Sbjct: 53 GEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 111
Query: 61 DGGDLCSFI---RSHEKL----------SEFQCQQFVR---QLVLALKFLRENNVCHFDL 104
GDL F+ H + S + FV Q+ +++L ++V H DL
Sbjct: 112 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDL 171
Query: 105 KPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIE-QGNTKVICSVFEPREIPSSKTSLE 160
+N+L+ + +K++ L G+ + + Y + GN+ + P I K S++
Sbjct: 172 ATRNVLVYDKLNVKISDL--GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 77 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 135
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 136 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 182
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 127
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 128 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 174
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 132
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 133 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 179
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 75 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 133
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 134 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 180
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 66 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 124
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 125 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 171
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 131
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 132 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 178
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 131
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 132 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 178
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYI 55
N VAIK I + + + EIK L H++I+ + D + + VYI
Sbjct: 45 NVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 56 ILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
+ + + DL +++ ++ C F+ Q++ LK++ NV H DLKP N+L+ N T
Sbjct: 104 VQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTT 160
Query: 116 LKLAGLKQGVSEKA 129
L G++ A
Sbjct: 161 CDLKICDFGLARVA 174
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 86 QLVLALKFLRENNVCHFDLKPQNILIKNNTLK 117
QL AL+FL EN + H DLKP+NIL N+ +
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFE 162
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 131
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 132 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 178
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 125
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 126 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 172
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 132
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 133 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 179
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL +++ ++ C
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 125
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 126 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 172
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 64 DLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
+L +++RS L C F Q+ ++FL H DL
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLA 177
Query: 106 PQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+NIL+ + N +K+ GL + + K Y+ +G+ ++ P I
Sbjct: 178 ARNILLSEKNVVKICDFGLARDIY---KDPDYVRKGDARLPLKWMAPETI 224
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 64 DLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
+L +++RS L C F Q+ ++FL H DL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLA 175
Query: 106 PQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+NIL+ + N +K+ GL + + K Y+ +G+ ++ P I
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIY---KDPDYVRKGDARLPLKWMAPETI 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 97 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 64 DLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
+L +++RS L C F Q+ ++FL H DL
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLA 212
Query: 106 PQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+NIL+ + N +K+ GL + + K Y+ +G+ ++ P I
Sbjct: 213 ARNILLSEKNVVKICDFGLARDIY---KDPDYVRKGDARLPLKWMAPETI 259
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 112
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 87 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 146
Query: 113 NNTLKLA--GL-KQGVSEKA 129
+ +K+ GL K+G+ + A
Sbjct: 147 DGHIKITDFGLCKEGIKDGA 166
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 112
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 86 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 145
Query: 113 NNTLKLA--GL-KQGVSEKA 129
+ +K+ GL K+G+ + A
Sbjct: 146 DGHIKITDFGLCKEGIKDGA 165
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 112
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 85 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 144
Query: 113 NNTLKLA--GL-KQGVSEKA 129
+ +K+ GL K+G+ + A
Sbjct: 145 DGHIKITDFGLCKEGIKDGA 164
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 112
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 284
Query: 113 NNTLKLA--GL-KQGVSEKA 129
+ +K+ GL K+G+ + A
Sbjct: 285 DGHIKITDFGLCKEGIKDGA 304
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 40 IVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
I+T+ D + D R ++ E+ + D F + + L+++ + ++ +++ AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD---FKQLRQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 98 NVCHFDLKPQNILIKNNTLKLAGLKQGVSE-KAKGSAYIEQGNTKVICSVFEPREI 152
+ H D+KP N++I + KL + G++E G Y N +V F+ E+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPEL 202
>pdb|3M85|G Chain G, Archaeoglobus Fulgidus Exosome Y70a With Rna Bound To The
Active Site
pdb|3M85|H Chain H, Archaeoglobus Fulgidus Exosome Y70a With Rna Bound To The
Active Site
pdb|3M85|I Chain I, Archaeoglobus Fulgidus Exosome Y70a With Rna Bound To The
Active Site
Length = 259
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 125 VSEKAKGSAYIEQGNTKVICSV-FEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
V EKA+GSA ++ G+T+V+ V +P E P+ T +G + V + P AS
Sbjct: 41 VIEKAEGSALVKLGDTQVVVGVKMQPGE-PAPDTP-----DRGVIIVNAELVPLASPTFE 94
Query: 184 GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVD-------LFVLV--LQNDGS------ 228
D EL + R + + + S ++ +FV + L +DG+
Sbjct: 95 PGPPDENSIELARVVDRGIRESEA-VDLSKLVIEEGEKVWIVFVDIHALDDDGNLLDASA 153
Query: 229 ------ALSAAINCANLALV-DAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQ-SLS 280
++ + L D +P+ DL S T + G +DP EE++ +L+
Sbjct: 154 LAAIAALMNTKVPAERFDLGEDYLLPVRDLPVSVTSLIVGNKYLVDPSREEMSVGDTTLT 213
Query: 281 SSEDDDSGVITL 292
+ D D V+ +
Sbjct: 214 ITTDKDDNVVAM 225
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 112
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 228 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 287
Query: 113 NNTLKLA--GL-KQGVSEKA 129
+ +K+ GL K+G+ + A
Sbjct: 288 DGHIKITDFGLCKEGIKDGA 307
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 9 IKCIDKT--KVSE-NRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERYVYIILEYCDGGD 64
I+C K+ +++E + ++ + E ++ L+H +++ ++ L E +++L Y GD
Sbjct: 50 IQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGD 109
Query: 65 LCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA--G 120
L FIRS ++ + F Q+ +++L E H DL +N ++ + T+K+A G
Sbjct: 110 LLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFG 169
Query: 121 LKQGVSEK 128
L + + ++
Sbjct: 170 LARDILDR 177
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I E+C G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 64 DLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
+L +++RS L C F Q+ ++FL H DL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLA 166
Query: 106 PQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+NIL+ + N +K+ GL + + K Y+ +G+ ++ P I
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIY---KDPDYVRKGDARLPLKWMAPETI 213
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I E+C G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 64 DLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
+L +++RS L C F Q+ ++FL H DL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLA 166
Query: 106 PQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+NIL+ + N +K+ GL + + K Y+ +G+ ++ P I
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIY---KDPDYVRKGDARLPLKWMAPETI 213
>pdb|1R28|A Chain A, Crystal Structure Of The B-Cell Lymphoma 6 (Bcl6) Btb
Domain To 2.2 Angstrom
pdb|1R28|B Chain B, Crystal Structure Of The B-Cell Lymphoma 6 (Bcl6) Btb
Domain To 2.2 Angstrom
pdb|1R29|A Chain A, Crystal Structure Of The B-cell Lymphoma 6 (bcl6) Btb
Domain To 1.3 Angstrom
pdb|1R2B|A Chain A, Crystal Structure Of The Bcl6 Btb Domain Complexed With A
Smrt Co-Repressor Peptide
pdb|1R2B|B Chain B, Crystal Structure Of The Bcl6 Btb Domain Complexed With A
Smrt Co-Repressor Peptide
pdb|3BIM|A Chain A, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|B Chain B, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|C Chain C, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|D Chain D, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|E Chain E, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|F Chain F, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|G Chain G, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|H Chain H, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3LBZ|A Chain A, Crystal Structure Of The Bcl6 Btb Domain Complexed With
The Molecule Inhibitor 79-6
pdb|3LBZ|B Chain B, Crystal Structure Of The Bcl6 Btb Domain Complexed With
The Molecule Inhibitor 79-6
Length = 127
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 371 KEFKAHKLILSMSSPVFATMFHGELCEKGDTKILD--ITPEAFSTMLDSDHHARVNI 425
++F+AHK +L S +F ++F +L LD I PE F+ +LD + +R+N+
Sbjct: 39 EQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNL 95
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER------YVYIILE 58
+VA+K + ++ + + + E +K H H+ ++ R +IL
Sbjct: 52 VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILP 111
Query: 59 YCDGGDLCSFI---RSHEKLSEFQCQQFVRQLV---LALKFLRENNVCHFDLKPQN-ILI 111
+ GDL +F+ R E Q VR +V +++L N H DL +N +L
Sbjct: 112 FMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLA 171
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQG 138
++ T+ +A G+S K Y QG
Sbjct: 172 EDMTVCVADF--GLSRKIYSGDYYRQG 196
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 111
++II+EY GG + L E Q +R+++ L +L H D+K N+L+
Sbjct: 95 LWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 153
Query: 112 KNNTLKLA 119
++ +KLA
Sbjct: 154 EHGEVKLA 161
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 111
++II+EY GG + L E Q +R+++ L +L H D+K N+L+
Sbjct: 80 LWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 138
Query: 112 KNNTLKLA 119
++ +KLA
Sbjct: 139 EHGEVKLA 146
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 111
++II+EY GG + L E Q +R+++ L +L H D+K N+L+
Sbjct: 80 LWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 138
Query: 112 KNNTLKLA 119
++ +KLA
Sbjct: 139 EHGEVKLA 146
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 26 VNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80
+ EIK L H++I+ + D + + VYI+ + + DL ++ ++ C
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKCQHLSNDHIC 131
Query: 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129
F+ Q++ LK++ NV H DLKP N+L+ N T L G++ A
Sbjct: 132 Y-FLYQILRGLKYIHSANVLHRDLKPSNLLL-NTTCDLKICDFGLARVA 178
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E T VA+K ++++ R + +NE +K H+V +L + + +++E
Sbjct: 45 GEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 103
Query: 61 DGGDLCSFIRSHEKLSEF----------QCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS +E + Q ++ + +L H +L +N +
Sbjct: 104 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCM 163
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ ++ T+K+ G++ + Y +G ++
Sbjct: 164 VAHDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 195
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E T VA+K ++++ R + +NE +K H+V +L + + +++E
Sbjct: 44 GEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 61 DGGDLCSFIRSHEKLSEF----------QCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS +E + Q ++ + +L H +L +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCM 162
Query: 111 IKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143
+ ++ T+K+ G++ + Y +G ++
Sbjct: 163 VAHDFTVKIGDF--GMTRDIYETDYYRKGGKGLL 194
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 111
++II+EY GG + L E Q +R+++ L +L H D+K N+L+
Sbjct: 100 LWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 158
Query: 112 KNNTLKLA 119
++ +KLA
Sbjct: 159 EHGEVKLA 166
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTM--LDFLWDERYVYIILEYCDGGD 64
VA+K + + + R EI+ LK LH IV + + + + +++EY G
Sbjct: 42 VAVKQLQHSGPDQQR--DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 65 LCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
L F++ H +L + + Q+ +++L H DL +NIL+++
Sbjct: 100 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 151
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLH---HQHIVTMLDFLWDERY-----VYIILE 58
VA+K + E S + E+ L+ L H ++V + D R + ++ E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 59 YCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNT 115
+ D DL +++ + + + QL+ L FL + V H DLKPQNIL+ +
Sbjct: 100 HVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ 158
Query: 116 LKLA 119
+KLA
Sbjct: 159 IKLA 162
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTM--LDFLWDERYVYIILEYCDGGD 64
VA+K + + + R EI+ LK LH IV + + + + +++EY G
Sbjct: 43 VAVKQLQHSGPDQQR--DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 65 LCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
L F++ H +L + + Q+ +++L H DL +NIL+++
Sbjct: 101 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 152
>pdb|2BA0|I Chain I, Archaeal Exosome Core
pdb|2BA0|H Chain H, Archaeal Exosome Core
pdb|2BA0|G Chain G, Archaeal Exosome Core
pdb|2BA1|G Chain G, Archaeal Exosome Core
pdb|2BA1|H Chain H, Archaeal Exosome Core
pdb|2BA1|I Chain I, Archaeal Exosome Core
pdb|3M7N|G Chain G, Archaeoglobus Fulgidus Exosome With Rna Bound To The
Active Site
pdb|3M7N|H Chain H, Archaeoglobus Fulgidus Exosome With Rna Bound To The
Active Site
pdb|3M7N|I Chain I, Archaeoglobus Fulgidus Exosome With Rna Bound To The
Active Site
Length = 259
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 31/192 (16%)
Query: 125 VSEKAKGSAYIEQGNTKVICSV-FEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
V EKA+GSA ++ G+T+V+ V +P E P T +G + V + P AS
Sbjct: 41 VIEKAEGSALVKLGDTQVVVGVKMQPGE-PYPDTP-----DRGVIIVNAELVPLASPTFE 94
Query: 184 GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVD-------LFVLV--LQNDGS------ 228
D EL + R + + + S ++ +FV + L +DG+
Sbjct: 95 PGPPDENSIELARVVDRGIRESEA-VDLSKLVIEEGEKVWIVFVDIHALDDDGNLLDASA 153
Query: 229 ------ALSAAINCANLAL-VDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQ-SLS 280
++ + L D +P+ DL S T + G +DP EE++ +L+
Sbjct: 154 LAAIAALMNTKVPAERFDLGEDYLLPVRDLPVSVTSLIVGNKYLVDPSREEMSVGDTTLT 213
Query: 281 SSEDDDSGVITL 292
+ D D V+ +
Sbjct: 214 ITTDKDDNVVAM 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTM--LDFLWDERYVYIILEYCDGGD 64
VA+K + + + R EI+ LK LH IV + + + + +++EY G
Sbjct: 55 VAVKQLQHSGPDQQR--DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 65 LCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
L F++ H +L + + Q+ +++L H DL +NIL+++
Sbjct: 113 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 164
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGG 63
+VA+K + K + N + EI+ L+ L+H++IV ++ + +I+E+ G
Sbjct: 52 QVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 110
Query: 64 DLCSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L ++ ++ K++ Q ++ Q+ + +L H DL +N+L+++
Sbjct: 111 SLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES 161
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLH---HQHIVTMLDFLWDERY-----VYIILE 58
VA+K + E S + E+ L+ L H ++V + D R + ++ E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 59 YCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNT 115
+ D DL +++ + + + QL+ L FL + V H DLKPQNIL+ +
Sbjct: 100 HVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ 158
Query: 116 LKLA 119
+KLA
Sbjct: 159 IKLA 162
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLH---HQHIVTMLDFLWDERY-----VYIILE 58
VA+K + E S + E+ L+ L H ++V + D R + ++ E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 59 YCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNT 115
+ D DL +++ + + + QL+ L FL + V H DLKPQNIL+ +
Sbjct: 100 HVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ 158
Query: 116 LKLA 119
+KLA
Sbjct: 159 IKLA 162
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILEYCDG 62
TEV +K +DK N +S + L H+H+V F DE ++ E+
Sbjct: 41 TEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENI--LVQEFVKF 96
Query: 63 GDLCSFIRSHEKLSEFQCQ-QFVRQLVLALKFLRENNVCHFDLKPQNILI 111
G L ++++ ++ + + +QL A+ FL EN + H ++ +NIL+
Sbjct: 97 GSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILL 146
>pdb|3CDI|A Chain A, Crystal Structure Of E. Coli Pnpase
Length = 723
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGE----LYVEFKFAP 176
++ GV + GSA +G T+ + + + +++ + GE + F P
Sbjct: 335 VRTGVLPRTHGSALFTRGETQALVTA----TLGTARDAQVLDELMGERTDTFLFHYNFPP 390
Query: 177 FASQIRTGWLRDSEEKELGNH--LKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAI 234
+ S TG + + +E+G+ KR + + + + V + + +++GS+ A++
Sbjct: 391 Y-SVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASV 449
Query: 235 NCANLALVDAAIPMYDLVTSSTLAL 259
A+LAL+DA +P+ V + L
Sbjct: 450 CGASLALMDAGVPIKAAVAGIAMGL 474
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGG 63
+VA+K + K + N + EI+ L+ L+H++IV ++ + +I+E+ G
Sbjct: 40 QVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 98
Query: 64 DLCSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L ++ ++ K++ Q ++ Q+ + +L H DL +N+L+++
Sbjct: 99 SLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES 149
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 75 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQGVSEKAKGSA 133
L E Q ++R +LAL L + H D+KP NI + KL V G+
Sbjct: 154 LPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213
Query: 134 YIEQGNTKVICS 145
+++G+ + +
Sbjct: 214 EVQEGDPRYMAP 225
>pdb|3H1C|A Chain A, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|B Chain B, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|C Chain C, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|G Chain G, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|I Chain I, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|K Chain K, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|M Chain M, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|O Chain O, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|R Chain R, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|T Chain T, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|V Chain V, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|X Chain X, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
Length = 549
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGE----LYVEFKFAP 176
++ GV + GSA +G T+ + + + +++ + GE + F P
Sbjct: 329 VRTGVLPRTHGSALFTRGETQALVTA----TLGTARDAQVLDELMGERTDTFLFHYNFPP 384
Query: 177 FASQIRTGWLRDSEEKELGNH--LKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAI 234
+ S TG + + +E+G+ KR + + + + V + + +++GS+ A++
Sbjct: 385 Y-SVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASV 443
Query: 235 NCANLALVDAAIPMYDLVTSSTLAL 259
A+LAL+DA +P+ V + L
Sbjct: 444 CGASLALMDAGVPIKAAVAGIAMGL 468
>pdb|3GCM|A Chain A, Crystal Structure Of E. Coli Polynucleotide Phosphorylase
Bound To Rna And Rnase E
pdb|3GCM|B Chain B, Crystal Structure Of E. Coli Polynucleotide Phosphorylase
Bound To Rna And Rnase E
pdb|3GCM|C Chain C, Crystal Structure Of E. Coli Polynucleotide Phosphorylase
Bound To Rna And Rnase E
pdb|3GLL|A Chain A, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core
pdb|3GME|A Chain A, Crystal Structure Of Polynucleotide Phosphorylase In
Complex With Rnase E And Manganese
Length = 549
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGE----LYVEFKFAP 176
++ GV + GSA +G T+ + + + +++ + GE + F P
Sbjct: 329 VRTGVLPRTHGSALFTRGETQALVTA----TLGTARDAQVLDELMGERTDTFLFHYNFPP 384
Query: 177 FASQIRTGWLRDSEEKELGNH--LKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAI 234
+ S TG + + +E+G+ KR + + + + V + + +++GS+ A++
Sbjct: 385 Y-SVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASV 443
Query: 235 NCANLALVDAAIPMYDLVTSSTLAL 259
A+LAL+DA +P+ V + L
Sbjct: 444 CGASLALMDAGVPIKAAVAGIAMGL 468
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 61 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 64 DLCSFIRSHEK-----------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 106
+L +++RS L C F Q+ ++FL H DL
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAA 176
Query: 107 QNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+NIL+ + N +K+ GL + + K + +G+ ++ P I
Sbjct: 177 RNILLSEKNVVKICDFGLARDIX---KDPDXVRKGDARLPLKWMAPETI 222
>pdb|3CDJ|A Chain A, Crystal Structure Of The E. Coli KhS1 DOMAIN TRUNCATED
Pnpase
Length = 559
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGE----LYVEFKFAP 176
++ GV + GSA +G T+ + + + +++ + GE + F P
Sbjct: 335 VRTGVLPRTHGSALFTRGETQALVTA----TLGTARDAQVLDELMGERTDTFLFHYNFPP 390
Query: 177 FASQIRTGWLRDSEEKELGNH--LKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAI 234
+ S TG + + +E+G+ KR + + + + V + + +++GS+ A++
Sbjct: 391 Y-SVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASV 449
Query: 235 NCANLALVDAAIPMYDLVTSSTLAL 259
A+LAL+DA +P+ V + L
Sbjct: 450 CGASLALMDAGVPIKAAVAGIAMGL 474
>pdb|3E4U|A Chain A, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|B Chain B, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|C Chain C, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|D Chain D, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|E Chain E, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|F Chain F, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
Length = 130
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 371 KEFKAHKLILSMSSPVFATMFHGELCEKGDTKILD----ITPEAFSTMLDSDHHARVNI 425
++F+AHK +L S +F ++F +L K + +++ I PE F +LD + +R+N+
Sbjct: 42 EQFRAHKTVLMACSGLFYSIFTDQL--KCNLSVINLDPEINPEGFCILLDFMYTSRLNL 98
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 64 DLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
+L +++RS L C F Q+ ++FL H DL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLA 166
Query: 106 PQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+NIL+ + N +K+ GL + + K + +G+ ++ P I
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIX---KDPDXVRKGDARLPLKWMAPETI 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 29/177 (16%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E T VA+K + + ++ + D E + + +IV +L + + ++ EY
Sbjct: 75 EPFTMVAVKMLKEEASADMQAD-FQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMA 133
Query: 62 GGDLCSFIRS----------HEKLS-----------EFQCQQ---FVRQLVLALKFLREN 97
GDL F+RS H LS C + RQ+ + +L E
Sbjct: 134 YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER 193
Query: 98 NVCHFDLKPQNILI-KNNTLKLAGLKQGVSEKAKGSAYIE-QGNTKVICSVFEPREI 152
H DL +N L+ +N +K+A G+S + Y + GN + P I
Sbjct: 194 KFVHRDLATRNCLVGENMVVKIADF--GLSRNIYSADYYKADGNDAIPIRWMPPESI 248
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 64 DLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
+L +++RS L C F Q+ ++FL H DL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLA 175
Query: 106 PQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+NIL+ + N +K+ GL + + K + +G+ ++ P I
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIX---KDPDXVRKGDARLPLKWMAPETI 222
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTM--LDFLWDERYVYIILEYCDGGD 64
VA+K + + + R EI+ LK LH IV + + + +++EY G
Sbjct: 39 VAVKQLQHSGPDQQR--DFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGC 96
Query: 65 LCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
L F++ H +L + + Q+ +++L H DL +NIL+++
Sbjct: 97 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 148
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 50 ERYVYIILEYCDGG--DLC-SFIRSHEKLS---EFQCQQFVRQLVLALKFLRENNVCHFD 103
+R++YI LE C+ DL S S E L E+ +RQ+ + L + H D
Sbjct: 81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRD 140
Query: 104 LKPQNILIKNNTLKLAGLKQGV 125
LKPQNIL+ ++ A + G
Sbjct: 141 LKPQNILVSTSSRFTADQQTGA 162
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 22 FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFI----RSHEKLSE 77
+ + E K L +H + IV++ + + +++ +GGD+ I + E
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKA 129
+ + Q+V L+ L + N+ + DLKP+N+L+ ++ ++++ L V KA
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 22 FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFI----RSHEKLSE 77
+ + E K L +H + IV++ + + +++ +GGD+ I + E
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKA 129
+ + Q+V L+ L + N+ + DLKP+N+L+ ++ ++++ L V KA
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 22 FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFI----RSHEKLSE 77
+ + E K L +H + IV++ + + +++ +GGD+ I + E
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKA 129
+ + Q+V L+ L + N+ + DLKP+N+L+ ++ ++++ L V KA
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 22 FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFI----RSHEKLSE 77
+ + E K L +H + IV++ + + +++ +GGD+ I + E
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKA 129
+ + Q+V L+ L + N+ + DLKP+N+L+ ++ ++++ L V KA
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 28/123 (22%)
Query: 4 HTEVA---IKCIDKTKVSENRFDSIVNEIKALKLLHH--------QHIVTMLDFLWDERY 52
+TE A IK + + ++N + + LKLL H H+V + + L
Sbjct: 58 YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL----- 112
Query: 53 VYIILEYCDGGDLCSFIRS--HEKLSEFQCQQFVRQLVLALKFL-RENNVCHFDLKPQNI 109
G +L + I+ H + +Q +QL+L L ++ R + H D+KP+N+
Sbjct: 113 ---------GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV 163
Query: 110 LIK 112
L++
Sbjct: 164 LME 166
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 111
++II+EY GG ++ L E +R+++ L +L H D+K N+L+
Sbjct: 92 LWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS 150
Query: 112 KNNTLKLA 119
+ +KLA
Sbjct: 151 EQGDVKLA 158
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 50 ERYVYIILEYCDGG--DLC-SFIRSHEKLS---EFQCQQFVRQLVLALKFLRENNVCHFD 103
+R++YI LE C+ DL S S E L E+ +RQ+ + L + H D
Sbjct: 81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRD 140
Query: 104 LKPQNILIKNNTLKLAGLKQG 124
LKPQNIL+ ++ A + G
Sbjct: 141 LKPQNILVSTSSRFTADQQTG 161
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 29/168 (17%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 64 DLCSFIRSHEKLSEFQCQQ----------------FVRQLVLALKFLRENNVCHFDLKPQ 107
+L +++RS K +EF + + Q+ ++FL H DL +
Sbjct: 120 NLSTYLRS--KRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAAR 177
Query: 108 NILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
NIL+ + N +K+ GL + + K + +G+ ++ P I
Sbjct: 178 NILLSEKNVVKICDFGLARDIX---KDPDXVRKGDARLPLKWMAPETI 222
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 7 VAIKCIDKTKV-SENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
VA+K + + SE+R ++++E+K L + HH ++V +L + +I+E+C G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 64 DLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
+L +++RS L C F Q+ ++FL H DL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLA 175
Query: 106 PQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
+NIL+ + N +K+ GL + + K + +G+ ++ P I
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIY---KDPDXVRKGDARLPLKWMAPETI 222
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 50 ERYVYIILEYCDGG--DLC-SFIRSHEKLS---EFQCQQFVRQLVLALKFLRENNVCHFD 103
+R++YI LE C+ DL S S E L E+ +RQ+ + L + H D
Sbjct: 99 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRD 158
Query: 104 LKPQNILIKNNT 115
LKPQNIL+ ++
Sbjct: 159 LKPQNILVSTSS 170
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 28/123 (22%)
Query: 4 HTEVA---IKCIDKTKVSENRFDSIVNEIKALKLLHH--------QHIVTMLDFLWDERY 52
+TE A IK + + ++N + + LKLL H H+V + + L
Sbjct: 58 YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL----- 112
Query: 53 VYIILEYCDGGDLCSFIRS--HEKLSEFQCQQFVRQLVLALKFL-RENNVCHFDLKPQNI 109
G +L + I+ H + +Q +QL+L L ++ R + H D+KP+N+
Sbjct: 113 ---------GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV 163
Query: 110 LIK 112
L++
Sbjct: 164 LME 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,628,438
Number of Sequences: 62578
Number of extensions: 517454
Number of successful extensions: 2679
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 1418
Number of HSP's gapped (non-prelim): 1130
length of query: 477
length of database: 14,973,337
effective HSP length: 102
effective length of query: 375
effective length of database: 8,590,381
effective search space: 3221392875
effective search space used: 3221392875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)