BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6508
(477 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P0I8|EXOS6_DANRE Exosome complex component MTR3 OS=Danio rerio GN=exosc6 PE=2 SV=2
Length = 271
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 118/206 (57%), Gaps = 5/206 (2%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
G+ +AKGSAYIE GNTK+ICSV+ P+E ++ E G L +F+ APF+ R
Sbjct: 50 GLVSQAKGSAYIEAGNTKIICSVYGPKE---TERRDETDMKTGRLVCDFRLAPFSCVKRG 106
Query: 184 GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVD 243
W++ SEE++L L +L P VC H + Q+D+ V+VL+NDGS L+ A+ CA++AL D
Sbjct: 107 AWIQGSEERDLSATLMESLRPGVCLHRYPRSQIDVNVMVLENDGSVLAHAVTCASMALAD 166
Query: 244 AAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQ 303
A I MYD+V TL G +DP E C S D+ G +TL+ + + QV+
Sbjct: 167 AGIEMYDIVLGCTLRQSGNACLVDPSYAE--ECGSWQEGYGDNQGCVTLALLPNLNQVSG 224
Query: 304 VTLVGTIQQERLADHIEQLIGCCESL 329
+ G ++++ L + + + C L
Sbjct: 225 LNADGEMREDTLTEAMRTCMDGCHKL 250
>sp|Q4V7Q6|ULK3_XENLA Serine/threonine-protein kinase ULK3 OS=Xenopus laevis GN=ulk3 PE=2
SV=1
Length = 468
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIKC+ K +++ ++++ EI+ LK +HH HI+ + DF WD+ Y+++I EYC GGDL
Sbjct: 40 VAIKCVSKKSLNKAAVENLLTEIEILKTVHHPHILELKDFQWDQDYIFLITEYCAGGDLS 99
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK---NNTLKLA--GL 121
FIR+ L E Q F++QL ALKFL E N+ H DLKPQNIL+ LKLA G
Sbjct: 100 RFIRTRRILPERIVQVFLQQLASALKFLHEKNISHLDLKPQNILLSRLDRPHLKLADFGF 159
Query: 122 KQGVS 126
Q +S
Sbjct: 160 AQHMS 164
>sp|Q5ZJH6|ULK3_CHICK Serine/threonine-protein kinase ULK3 OS=Gallus gallus GN=ULK3 PE=2
SV=1
Length = 468
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VA+KC+ K ++ ++++ EI+ LK + H HIV + DF WD ++Y+I+E+C GGDL
Sbjct: 41 VAVKCVSKRSLNRASVENLLTEIEILKTIRHPHIVELKDFQWDSDHIYLIMEFCAGGDLS 100
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI---KNNTLKLA--GL 121
FIR L E + F++QL ALKFL ++N+ H DLKPQNIL+ +N LKLA G
Sbjct: 101 RFIRMRRILPEKVARIFLQQLACALKFLHDHNISHLDLKPQNILLSTPENPQLKLADFGF 160
Query: 122 KQGVS 126
Q +S
Sbjct: 161 AQYMS 165
>sp|Q6PHR2|ULK3_HUMAN Serine/threonine-protein kinase ULK3 OS=Homo sapiens GN=ULK3 PE=1
SV=2
Length = 472
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIKC+ K +++ ++++ EI+ LK + H HIV + DF WD +Y+I+E+C GGDL
Sbjct: 41 VAIKCVAKKSLNKASVENLLTEIEILKGIRHPHIVQLKDFQWDSDNIYLIMEFCAGGDLS 100
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL---IKNNTLKLA--GL 121
FI + L E + F++QL AL+FL E N+ H DLKPQNIL ++ LKLA G
Sbjct: 101 RFIHTRRILPEKVARVFMQQLASALQFLHERNISHLDLKPQNILLSSLEKPHLKLADFGF 160
Query: 122 KQGVS 126
Q +S
Sbjct: 161 AQHMS 165
>sp|D3ZHP7|ULK3_RAT Serine/threonine-protein kinase ULK3 OS=Rattus norvegicus GN=Ulk3
PE=3 SV=1
Length = 472
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIKC+ K +++ ++++ EI+ LK + H HIV + DF WD +Y+I+E+C GGDL
Sbjct: 41 VAIKCVAKKSLNKASVENLLTEIEILKGIRHPHIVQLKDFQWDNDNIYLIMEFCAGGDLS 100
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL---IKNNTLKLA--GL 121
FI + L E + F++QL AL+FL E N+ H DLKPQNIL ++ LKLA G
Sbjct: 101 RFIHTRRILPEKVARVFMQQLASALQFLHERNISHLDLKPQNILLSSLEKPHLKLADFGF 160
Query: 122 KQGVS 126
Q +S
Sbjct: 161 AQHMS 165
>sp|Q3U3Q1|ULK3_MOUSE Serine/threonine-protein kinase ULK3 OS=Mus musculus GN=Ulk3 PE=2
SV=1
Length = 472
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIKC+ K +++ ++++ EI+ LK + H HIV + DF WD +Y+I+E+C GGDL
Sbjct: 41 VAIKCVAKKSLNKASVENLLTEIEILKGIRHPHIVQLKDFQWDNDNIYLIMEFCAGGDLS 100
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL---IKNNTLKLA--GL 121
FI + L E + F++QL AL+FL E N+ H DLKPQNIL ++ LKLA G
Sbjct: 101 RFIHTRRILPEKVARVFMQQLASALQFLHERNISHLDLKPQNILLSSLEKPHLKLADFGF 160
Query: 122 KQGVS 126
Q +S
Sbjct: 161 AQHMS 165
>sp|Q28F19|EXOS6_XENTR Exosome complex component MTR3 OS=Xenopus tropicalis GN=exosc6 PE=2
SV=1
Length = 270
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 21/191 (10%)
Query: 121 LKQGVSEKAKGSAYIE--QGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFA 178
++ G+ +AKGSAY+E G TKV+C+V PRE E ++G L + ++APF+
Sbjct: 45 VRAGLLSQAKGSAYLEAGSGGTKVLCAVHGPRE---RGMGGERAETRGRLLCDLRWAPFS 101
Query: 179 SQIRTGW----LRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAI 234
R W ++ G L+ +LEPAV + +V ++VLVL++ GSAL AA+
Sbjct: 102 R--RGPWSGSCPAGPSPRQAGLQLQESLEPAVRLDRYPRAEVIVWVLVLEDRGSALPAAV 159
Query: 235 NCANLALVDAAIPMYDLVTSSTLAL-RGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLS 293
+CA+LAL DA I M+DL L+ GG +DP ++E E G ++LS
Sbjct: 160 SCASLALADAGIEMFDLALGCGLSRGPGGELLLDPDDDE---------EEAGSGGTMSLS 210
Query: 294 YMSVIQQVTQV 304
+ + QV+ +
Sbjct: 211 LLPTLNQVSGL 221
>sp|Q8U0L9|ECX1_PYRFU Probable exosome complex exonuclease 1 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1568 PE=3 SV=1
Length = 250
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 28/254 (11%)
Query: 104 LKPQNI-LIKNNTLKLAG----------LKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152
LKP+ + LI N +L G +K GV + A GSAYIE G K+I +V+ PREI
Sbjct: 3 LKPEGLKLIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREI 62
Query: 153 -PSSKTSLEYQRS-KGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHE 210
P QR + L V + APF+ + R D E+ ++ ALEPA+
Sbjct: 63 HPK-----HLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIRGALEPALILEM 117
Query: 211 FSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVE 270
F +D+F+ VLQ D A I A+LAL DA IPM DLV + + G +D +
Sbjct: 118 FPRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACSAGKIEGEIVLDLNK 177
Query: 271 EEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLC 330
EE Y ++ + ++ M + +T + + G + +E + ++ I +++
Sbjct: 178 EEDNYGEA----------DVPVAIMPIKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVY 227
Query: 331 TDRVQKLVSDHVTL 344
+ + L ++ +
Sbjct: 228 QKQREALKEKYLKI 241
>sp|A9A5C9|ECX1_NITMS Probable exosome complex exonuclease 1 OS=Nitrosopumilus maritimus
(strain SCM1) GN=Nmar_0432 PE=3 SV=1
Length = 244
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 105 KPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRS 164
+P+ I+IK LK A GS+YIE G+ K++ VF PR++ S
Sbjct: 25 EPRRIMIKAGGLK----------NADGSSYIEFGDNKILVGVFGPRDVHPKHMS---DTD 71
Query: 165 KGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQ 224
G L V + PF+ R E E+ +K ALEPAV +F VD+F+ VLQ
Sbjct: 72 TGILRVRYHMEPFSVGERKNPAPSRREIEISKVIKEALEPAVMLEKFPRTAVDVFIEVLQ 131
Query: 225 NDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSED 284
DG AA+ A++AL DA IPM D+V + +D ++E+
Sbjct: 132 ADGGTRCAALTAASVALADAGIPMRDMVAAIAAGKVADTVILD------------VNNEE 179
Query: 285 DDSGV--ITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCE 327
D +G + + YM ++++T + L G + E I+ + C+
Sbjct: 180 DQAGQADMPIGYMPNLEKITLLQLDGVLTPEEYKKCIQVGVDGCK 224
>sp|O75385|ULK1_HUMAN Serine/threonine-protein kinase ULK1 OS=Homo sapiens GN=ULK1 PE=1
SV=2
Length = 1050
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
Query: 2 EQH-TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E+H EVA+KCI+K +++++ + EIK LK L H++IV + DF VY+++EYC
Sbjct: 37 EKHDLEVAVKCINKKNLAKSQ-TLLGKEIKILKELKHENIVALYDFQEMANSVYLVMEYC 95
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA 119
+GGDL ++ + LSE + F++Q+ A++ L + H DLKPQNIL+ N + A
Sbjct: 96 NGGDLADYLHAMRTLSEDTIRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNPAGRRA 154
>sp|O59223|ECX1_PYRHO Probable exosome complex exonuclease 1 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH1549 PE=3 SV=1
Length = 249
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 26/252 (10%)
Query: 105 KPQNI-LIKNNTLKLAG----------LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIP 153
KP+ + LI N ++ G +K GV + A GSAYIE G K+I +V+ PRE+
Sbjct: 4 KPEGLKLIDENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPRELH 63
Query: 154 SSKTSLEYQRS-KGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFS 212
S QR + L V + APF+ + R D E+ +K ALEPA+ F
Sbjct: 64 SK----HLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFP 119
Query: 213 NFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEE 272
+D+F+ VLQ D A I A+LAL DA IPM DLV + G +D +EE
Sbjct: 120 RTSIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEE 179
Query: 273 VAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTD 332
Y ++ + ++ M + +T + + G + +E + + I +++
Sbjct: 180 DNYGEA----------DVPVAIMPLKNDITLLQMDGYLTKEEFIEAVRLAIKGAKAVYQK 229
Query: 333 RVQKLVSDHVTL 344
+ + L ++ +
Sbjct: 230 QREALKEKYLKI 241
>sp|O70405|ULK1_MOUSE Serine/threonine-protein kinase ULK1 OS=Mus musculus GN=Ulk1 PE=1
SV=1
Length = 1051
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Query: 2 EQHT-EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E+H EVA+KCI+K +++++ + EIK LK L H++IV + DF VY+++EYC
Sbjct: 37 EKHDLEVAVKCINKKNLAKSQ-TLLGKEIKILKELKHENIVALYDFQEMANSVYLVMEYC 95
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
+GGDL ++ + LSE + F++Q+ A++ L + H DLKPQNIL+ N
Sbjct: 96 NGGDLADYLHTMRTLSEDTVRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSN 148
>sp|Q17533|EXOS4_CAEEL Putative exosome complex component RRP41 OS=Caenorhabditis elegans
GN=exos-4.1 PE=2 SV=2
Length = 240
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 31/216 (14%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
G++ A+GS Y+E GNTKV+C+V+ P E SSK +E + + Y KF+ + RT
Sbjct: 27 GLNRNAEGSCYLEHGNTKVLCAVYGPYEGKSSK-RIEDKCAIVCQYSATKFSGLERKNRT 85
Query: 184 GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVD 243
D + E+ L++A E + F Q+D+F V+Q DGS L+A +N +LAL D
Sbjct: 86 RG--DRKSTEISRLLEKAFESVILTEAFPRSQLDIFCEVIQGDGSNLAACVNATSLALAD 143
Query: 244 AAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQ 303
A IPM + +++T + G +D L+S E+ D ++ +VT
Sbjct: 144 AGIPMKGIASAATCGVVDGKPIVD-----------LTSREETD----------LLPRVTL 182
Query: 304 VTLVGTIQ------QERL-ADHIEQLIGCCESLCTD 332
T+ G + Q RL DH+ ++ ++ C D
Sbjct: 183 ATICGRDEVILVELQNRLHIDHLSTVMDAAKATCAD 218
>sp|Q9YC03|ECX1_AERPE Probable exosome complex exonuclease 1 OS=Aeropyrum pernix (strain
ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=APE_1447 PE=3 SV=1
Length = 246
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Query: 116 LKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFA 175
L+ ++ G+ A GSA +E G T+V+ +V+ PRE P + + R+ L V + A
Sbjct: 26 LRPVRMQVGILHNADGSALVEFGRTRVLAAVYGPRE-PHQRFYVLPDRAA--LRVRYHMA 82
Query: 176 PFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAIN 235
PF++ R E EL ++ ALEP V EF +D+F+ VLQ DG +AA+
Sbjct: 83 PFSTDERKSPAPSRREIELSKVVREALEPVVLAEEFPRTVIDVFLEVLQADGGTRTAAVT 142
Query: 236 CANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQS-LSSSEDDDSGVITL 292
A+LAL DA IPM LV + G+ +D E E Y ++ + + D G ITL
Sbjct: 143 AASLALADAGIPMRALVGGVAVGKIQGVLVVDVDELEDMYGEADMPVAAAPDIGEITL 200
>sp|O29757|ECX1_ARCFU Probable exosome complex exonuclease 1 OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=AF_0493 PE=1 SV=1
Length = 258
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 23/194 (11%)
Query: 99 VCHFDLKPQNILI--------KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150
+ F+ KP+ +++ K + L+ ++ V ++A GS Y+E G KVI +VF PR
Sbjct: 1 MSEFNEKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPR 60
Query: 151 EI-P-----SSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEP 204
E+ P SK + Y+ + APF+ + R D E+ K A E
Sbjct: 61 EVHPRHLQDPSKAIIRYR---------YNMAPFSVEERKRPGPDRRSIEISKVSKEAFEA 111
Query: 205 AVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLT 264
+ + F +D+FV VLQ D + +A +N A++ALVDA +PM ++TS + G
Sbjct: 112 VIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQL 171
Query: 265 FIDPVEEEVAYCQS 278
+DP++EE + ++
Sbjct: 172 VLDPMKEEDNFGEA 185
>sp|Q5JIR6|ECX1_PYRKO Probable exosome complex exonuclease 1 OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=TK1634 PE=3
SV=1
Length = 249
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 105 KPQNI-LIKNNTLKLAGLKQ----------GVSEKAKGSAYIEQGNTKVICSVFEPREIP 153
+P+ + LI N ++ G K+ GV + A GSAY+E G KV+ +V+ PREI
Sbjct: 4 RPEGLKLIDENGKRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIH 63
Query: 154 SSKTSLEYQRS-KGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFS 212
QR + L V + APF+ + R D E+ ++ ALEPA+ H F
Sbjct: 64 PK----HLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALLLHMFP 119
Query: 213 NFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEE 272
+D+F+ +LQ D A I A+LAL DA IPM DLV + G +D +EE
Sbjct: 120 RTAIDVFIEILQADAGTRVAGITAASLALADAGIPMKDLVAACAAGKIDGEIVLDLNKEE 179
Query: 273 VAYCQS 278
Y ++
Sbjct: 180 DNYGEA 185
>sp|Q9V119|ECX1_PYRAB Probable exosome complex exonuclease 1 OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=PYRAB06100 PE=1 SV=1
Length = 249
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 105 KPQNI-LIKNNTLKLAGLKQ----------GVSEKAKGSAYIEQGNTKVICSVFEPREI- 152
KP+ + LI N ++ G K+ GV + A GSAYIE G K+I +V+ PRE+
Sbjct: 4 KPEGLKLIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELH 63
Query: 153 PSSKTSLEYQRS-KGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEF 211
P QR + L V + APF+ + R D E+ +K ALEPA+ F
Sbjct: 64 PKH-----LQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMF 118
Query: 212 SNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEE 271
+D+F+ VLQ D A I A+LAL DA IPM DLV + G +D +E
Sbjct: 119 PRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKE 178
Query: 272 EVAYCQS 278
E Y ++
Sbjct: 179 EDNYGEA 185
>sp|Q19469|SAD1_CAEEL Serine/threonine kinase SAD-1 OS=Caenorhabditis elegans GN=sad-1
PE=1 SV=2
Length = 914
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK ++K K+SE+ + EI +KL+ H H++ + D +++Y+Y++LE+ GG+L
Sbjct: 72 KVAIKIVNKEKLSESVLQKVEREIAIMKLIEHPHVLHLYDVYENKKYLYLLLEHVSGGEL 131
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
++ +L + ++F RQ++ AL F +N+CH DLKP+N+L+ + N +K+A
Sbjct: 132 FDYLVRKGRLMSKEARKFFRQIISALDFCHAHNICHRDLKPENLLLDERNNIKVA 186
>sp|B6YSI2|ECX1_THEON Probable exosome complex exonuclease 1 OS=Thermococcus onnurineus
(strain NA1) GN=TON_0030 PE=3 SV=1
Length = 249
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 105 KPQNI-LIKNNTLKLAGLKQ----------GVSEKAKGSAYIEQGNTKVICSVFEPREI- 152
KP+++ LI N ++ G K+ GV + A GSAY+E G K++ +V+ PREI
Sbjct: 4 KPEDLKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKILAAVYGPREIH 63
Query: 153 PSSKTSLEYQRS-KGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEF 211
P QR + L V + APF+ + R D E+ ++ ALEPA+ F
Sbjct: 64 PK-----HLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMF 118
Query: 212 SNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEE 271
+D+F+ VLQ D A I A+LAL DA IPM DLV + G +D +E
Sbjct: 119 PRTAIDIFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKE 178
Query: 272 EVAYCQS 278
E Y ++
Sbjct: 179 EDNYGEA 185
>sp|A1RST0|ECX1_PYRIL Probable exosome complex exonuclease 1 OS=Pyrobaculum islandicum
(strain DSM 4184 / JCM 9189) GN=Pisl_0836 PE=3 SV=1
Length = 246
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI-R 182
G+ A GSA + G T + +V+ PRE+ SL +G + V + APF+++ R
Sbjct: 31 GIVSNADGSAMVSYGATTAVAAVYGPREMHPRHLSLP---DRGVMRVRYHMAPFSTKDER 87
Query: 183 TGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALV 242
E E+ L+ ALEPAV ++ ++D+F+ +LQ DGS A++ A+LAL
Sbjct: 88 KSPTPTRREIEISKILREALEPAVVLEQYPRSRIDVFIEILQADGSTRVASLTAASLALA 147
Query: 243 DAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDD-DSGVITLSYMSVIQQV 301
DA + M DLV ++ L G +D L+ ED G + + YM +++
Sbjct: 148 DAGVYMRDLVIGVSVGLVDGAVVLD-----------LNGLEDQYGEGDLPVGYMPNLKRF 196
Query: 302 TQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVTLPE 346
T + L G +++ + + I E + L S ++T+ E
Sbjct: 197 TLLQLDGAWTRDKFLEALNLAIKGAEFVYQKARDALKSKYMTIAE 241
>sp|Q8TDC3|BRSK1_HUMAN Serine/threonine-protein kinase BRSK1 OS=Homo sapiens GN=BRSK1 PE=1
SV=2
Length = 778
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK +++ K+SE+ + EI LKL+ H H++ + D +++Y+Y++LE+ GG+L
Sbjct: 59 KVAIKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGEL 118
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
++ +L+ + ++F RQ+V AL F ++CH DLKP+N+L+ + N +++A
Sbjct: 119 FDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIA 173
>sp|B1Y978|ECX1_PYRNV Probable exosome complex exonuclease 1 OS=Pyrobaculum neutrophilum
(strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1381 PE=3
SV=1
Length = 246
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI-R 182
GV A GSA + G T + +V+ PRE+ SL +G + V + APF+++ R
Sbjct: 31 GVISNADGSAMVSYGATTAVAAVYGPREMHPRHLSLP---DRGVMRVRYHMAPFSTKDER 87
Query: 183 TGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALV 242
E E+ L+ ALEPAV ++ ++D+F+ +LQ DGS A++ A+LAL
Sbjct: 88 KSPTPSRREIEISKVLREALEPAVMLEQYPRSRIDVFIEILQADGSTRVASLTAASLALA 147
Query: 243 DAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDD-DSGVITLSYMSVIQQV 301
DA I M DLV ++ L G +D L+ ED G + + YM +++
Sbjct: 148 DAGIYMRDLVIGVSVGLVDGTVVLD-----------LNGLEDQYGEGDLPVGYMPNLRRY 196
Query: 302 TQVTLVGTIQQERLADHIEQLIGCCE 327
T + L G +++L + + + E
Sbjct: 197 TLLQLDGAWGRDKLLEALNLAVKGAE 222
>sp|Q8IWQ3|BRSK2_HUMAN Serine/threonine-protein kinase BRSK2 OS=Homo sapiens GN=BRSK2 PE=1
SV=3
Length = 736
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK +++ K+SE+ + EI LKL+ H H++ + D +++Y+Y++LE+ GG+L
Sbjct: 44 KVAIKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGEL 103
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
++ +L+ + ++F RQ++ AL F +++CH DLKP+N+L+ + N +++A
Sbjct: 104 FDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDEKNNIRIA 158
>sp|B2DD29|BRSK1_RAT Serine/threonine-protein kinase BRSK1 OS=Rattus norvegicus GN=Brsk1
PE=1 SV=1
Length = 778
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K +++ K+SE+ + EI LKL+ H H++ + D +++Y+Y++LE+ GG+L
Sbjct: 59 KVAVKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGEL 118
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
++ +L+ + ++F RQ+V AL F ++CH DLKP+N+L+ + N +++A
Sbjct: 119 FDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIA 173
>sp|D3ZML2|BRSK2_RAT Serine/threonine-protein kinase BRSK2 OS=Rattus norvegicus GN=Brsk2
PE=2 SV=1
Length = 735
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK +++ K+SE+ + EI LKL+ H H++ + D +++Y+Y++LE+ GG+L
Sbjct: 45 KVAIKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGEL 104
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
++ +L+ + ++F RQ++ AL F +++CH DLKP+N+L+ + N +++A
Sbjct: 105 FDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDERNNIRIA 159
>sp|Q5RJI5|BRSK1_MOUSE Serine/threonine-protein kinase BRSK1 OS=Mus musculus GN=Brsk1 PE=1
SV=1
Length = 778
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VA+K +++ K+SE+ + EI LKL+ H H++ + D +++Y+Y++LE+ GG+L
Sbjct: 59 KVAVKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGEL 118
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
++ +L+ + ++F RQ+V AL F ++CH DLKP+N+L+ + N +++A
Sbjct: 119 FDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIA 173
>sp|Q69Z98|BRSK2_MOUSE Serine/threonine-protein kinase BRSK2 OS=Mus musculus GN=Brsk2 PE=1
SV=2
Length = 735
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+VAIK +++ K+SE+ + EI LKL+ H H++ + D +++Y+Y++LE+ GG+L
Sbjct: 45 KVAIKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGEL 104
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
++ +L+ + ++F RQ++ AL F +++CH DLKP+N+L+ + N +++A
Sbjct: 105 FDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDERNNIRIA 159
>sp|A8WQQ5|EXOS4_CAEBR Putative exosome complex component RRP41 OS=Caenorhabditis briggsae
GN=exos-4.1 PE=3 SV=1
Length = 240
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 33/219 (15%)
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI 181
+ G++ A+GS Y+E GNTKV+C+V+ P E +SK LE + + ++ F+
Sbjct: 25 RLGLNRNAEGSCYLEHGNTKVLCAVYGPYESKASK-RLE---DRCAIVCQYSTTTFSGLE 80
Query: 182 RTGWLR-DSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
R R D + E+ L++A E + F Q+D+F V+Q DGS L+A +N +LA
Sbjct: 81 RKNRPRGDRKSTEISRLLEKAFESVILTESFPRSQIDIFCEVIQGDGSNLAACVNATSLA 140
Query: 241 LVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQ 300
L DA IPM + +++T G+ P+ + L+S E+ D ++ +
Sbjct: 141 LADAGIPMKGIASAATC----GIVETKPIVD-------LTSREETD----------LLPR 179
Query: 301 VTQVTLVGTIQ------QERL-ADHIEQLIGCCESLCTD 332
VT T+ G + Q RL DH+ ++ ++ C D
Sbjct: 180 VTLATICGRDEVILVELQNRLHIDHLSVVMDAAKATCAD 218
>sp|C5A2B9|ECX1_THEGJ Probable exosome complex exonuclease 1 OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_2036 PE=3 SV=1
Length = 249
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 26/252 (10%)
Query: 105 KPQNI-LIKNNTLKLAGLKQ----------GVSEKAKGSAYIEQGNTKVICSVFEPREIP 153
+P+ + LI N ++ G ++ GV + A GSAYIE G K++ +V+ PREI
Sbjct: 4 RPEGLKLIDENGRRIDGRRKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIH 63
Query: 154 SSKTSLEYQRS-KGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFS 212
QR L V + APF+ + R D E+ ++ ALEPA+ F
Sbjct: 64 PK----HLQRPDTAVLRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFP 119
Query: 213 NFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEE 272
VD+F+ VLQ D A I A+LAL DA +PM DLV + G +D ++E
Sbjct: 120 RTVVDVFIEVLQADAGTRVAGITAASLALADAGVPMRDLVAACAAGKIDGEIVLDLNKDE 179
Query: 273 VAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTD 332
Y ++ + ++ M + +T + + G + +E + ++ I +++
Sbjct: 180 DNYGEA----------DVPVAIMPLKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQK 229
Query: 333 RVQKLVSDHVTL 344
+ + L ++ +
Sbjct: 230 QREALKEKYLKI 241
>sp|Q86CS2|ATG1_DICDI Serine/threonine-protein kinase atg1 OS=Dictyostelium discoideum
GN=atg1 PE=3 SV=1
Length = 668
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 74/118 (62%), Gaps = 14/118 (11%)
Query: 8 AIKCID-------KTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFL---WDERYVYIIL 57
AIK +D +K++EN + EI+ LK L H +IV + D L D ++Y+I+
Sbjct: 34 AIKVVDVCRLADKNSKLTEN----LNYEIRILKELSHTNIVRLYDVLNEETDPTFIYMIM 89
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
E C+GGD +IR+H+KL+E + F++QL LKFLR+ + H DLKPQN+L+ +++
Sbjct: 90 ECCEGGDFSKYIRTHKKLTEEKALYFMKQLANGLKFLRQKQIVHRDLKPQNLLLSDDS 147
>sp|Q0UY20|ATG1_PHANO Serine/threonine-protein kinase atg1 OS=Phaeosphaeria nodorum
(strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=ATG1 PE=3
SV=2
Length = 972
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E+ VAIK ++ K+++ D++V+EI L+ LHH HIV+++D ++II+E+C+
Sbjct: 57 EKRQSVAIKSVNMNKLNKKLKDNLVSEISILRSLHHPHIVSLIDCHETPSRMHIIMEFCE 116
Query: 62 GGDLCSFIRSH-------------EK--------LSEFQCQQFVRQLVLALKFLRENNVC 100
GDL +FI+ EK L+E + F +Q+ AL+FLR N
Sbjct: 117 LGDLSAFIKKRADLVNHPQTQRMIEKYPNPAVGGLNEVIVRHFAKQMASALEFLRSKNYI 176
Query: 101 HFDLKPQNILIKNNTL 116
H DLKPQN+L+ +++
Sbjct: 177 HRDLKPQNLLLNPSSV 192
>sp|Q9P7R3|MTR3_SCHPO Exosome complex component mtr3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mtr3 PE=3 SV=1
Length = 257
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 27/235 (11%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQ 180
LK G + KA GS+Y E K+ C+V PR PS + RS +L EF+ +PF++
Sbjct: 40 LKLGWATKAVGSSYFESEKIKIACTVSGPR--PSKTFAF---RSSAKLNCEFRLSPFSTS 94
Query: 181 IRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDG--SALSAAINCAN 238
+R G ++ EEK ++ A+ P++ H + +D+++ V+++DG + L+AAI+CA+
Sbjct: 95 VRQGHVQTVEEKSYSQMIEAAISPSILLHLYPKSSIDVYIQVIESDGALATLAAAISCAS 154
Query: 239 LALVDAAIPMYDLVTSSTLALRGGLT--FIDP--VEEEVAYCQSLSSSEDDDSGVITLSY 294
A+ DA I DLVT S++ +IDP V+E + G + + Y
Sbjct: 155 SAIADANIDCIDLVTGSSVLFNPNTDEYWIDPDYVDERARAAK----------GSVVMGY 204
Query: 295 MSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVTLPERGR 349
M+ + VTQV GT RL+ E+ I + +LV +H L E+ +
Sbjct: 205 MASLGHVTQVWERGTCSPSRLSFLTEKCIKNAKD------TRLVINHALLLEKSK 253
>sp|Q9TW45|PAR1_CAEEL Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans
GN=par-1 PE=1 SV=1
Length = 1192
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 67/106 (63%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAIK IDKT ++ + + E+K +K L H +IV + + E+ +Y++LEY GG++
Sbjct: 195 EVAIKIIDKTALNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEV 254
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++L N+ H DLK +N+L+
Sbjct: 255 FDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLL 300
>sp|A8WYE4|PAR1_CAEBR Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae
GN=par-1 PE=3 SV=1
Length = 1088
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 67/106 (63%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAIK IDKT ++ + + E+K +K L H +IV + + E+ +Y++LEY GG++
Sbjct: 153 EVAIKIIDKTALNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEV 212
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++L N+ H DLK +N+L+
Sbjct: 213 FDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLL 258
>sp|Q921I9|EXOS4_MOUSE Exosome complex component RRP41 OS=Mus musculus GN=Exosc4 PE=2 SV=3
Length = 245
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI 181
+ GV +A GSAYIEQGNTK + V+ P EI S++ R+ + ++ A F++
Sbjct: 28 RMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRSRALPDRAL--VNCQYSSATFSTGE 85
Query: 182 RTGWLR-DSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
R D + E+G L++ E A+ Q+D++V VLQ DG +A +N A LA
Sbjct: 86 RKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLA 145
Query: 241 LVDAAIPMYDLVTSSTLALRGGLTFIDPVE-EEVAYCQSLSSSEDDDSGVITLSYM 295
++DA IPM D V + + G D EE A L+ + SG I L M
Sbjct: 146 VMDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEM 201
>sp|Q3ZDQ4|ATG1_PODAS Serine/threonine-protein kinase atg1 OS=Podospora anserina GN=ATG1
PE=2 SV=1
Length = 941
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 21/131 (16%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK ++ +++++ +++ EIK LK L H HIV + D + ++ +I+EYC+ GDL
Sbjct: 52 VAIKSVELSRLNKKLKENLYGEIKILKTLRHPHIVALHDCVESATHINLIMEYCELGDLS 111
Query: 67 SFIRSHEK---------------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
FI+ EK L E + F++QL ALKFLRE N H D+K
Sbjct: 112 LFIKKREKLITHSATRDIARRYPIEHNQGLHEVITRHFLKQLASALKFLREGNFVHRDVK 171
Query: 106 PQNILIKNNTL 116
PQN+L+ + L
Sbjct: 172 PQNLLLLPSPL 182
>sp|Q9UXC2|ECX1_SULSO Probable exosome complex exonuclease 1 OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
GN=SSO0735 PE=1 SV=1
Length = 248
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 13/237 (5%)
Query: 112 KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVE 171
K + L+ ++ GV + A GSA E GNTK I +V+ P+E+ SL + L V
Sbjct: 24 KPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLP---DRAVLRVR 80
Query: 172 FKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALS 231
+ PF++ R E EL ++ ALE AV F +D+F +LQ D +
Sbjct: 81 YHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRL 140
Query: 232 AAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVIT 291
++ A+LAL DA IPM DL+ + G+ +D E E + ++ +
Sbjct: 141 VSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEA----------DMP 190
Query: 292 LSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVTLPERG 348
++ M + QVT L G++ + + + + + L S +V E G
Sbjct: 191 IAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEG 247
>sp|Q9NPD3|EXOS4_HUMAN Exosome complex component RRP41 OS=Homo sapiens GN=EXOSC4 PE=1 SV=3
Length = 245
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI 181
+ GV +A GSAYIEQGNTK + V+ P EI S+ R+ + ++ A F++
Sbjct: 28 RMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARALPDRAL--VNCQYSSATFSTGE 85
Query: 182 RTGWLR-DSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
R D + E+G L++ E A+ Q+D++V VLQ DG +A +N A LA
Sbjct: 86 RKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLA 145
Query: 241 LVDAAIPMYDLVTSSTLALRGGLTFIDPVE-EEVAYCQSLSSSEDDDSGVITLSYM 295
++DA IPM D V + + G D EE A L+ + SG I L M
Sbjct: 146 VLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEM 201
>sp|Q7YRA3|EXOS4_BOVIN Exosome complex component RRP41 OS=Bos taurus GN=EXOSC4 PE=2 SV=3
Length = 245
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI 181
+ GV +A GSAYIEQGNTK + V+ P EI S+ R+ + ++ A F++
Sbjct: 28 RMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARALPDRAL--VNCQYSSATFSTGE 85
Query: 182 RTGWLR-DSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
R D + E+G L++ E A+ Q+D++V VLQ DG +A +N A LA
Sbjct: 86 RKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLA 145
Query: 241 LVDAAIPMYDLVTSSTLALRGGLTFIDPVE-EEVAYCQSLSSSEDDDSGVITLSYM 295
++DA IPM D V + + G D EE A L+ + SG I L M
Sbjct: 146 VLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEM 201
>sp|Q8TYC1|ECX1_METKA Probable exosome complex exonuclease 1 OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=MK0381 PE=3 SV=1
Length = 239
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 110 LIKNNTLKLAGLKQ----------GVSEKAKGSAYIEQGNTKVICSVFEPREI-PSSKTS 158
LI + L+L G K GV ++A GSAY+E G K++ +V+ PRE+ P K
Sbjct: 8 LISEDGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVYGPRELHPRHKQK 67
Query: 159 LEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDL 218
+ + + + APF+ R D E+ K ALEPA+ + +D+
Sbjct: 68 PD----RAVVRFRYNMAPFSVDERKRPGPDRRSIEISKLSKEALEPAIFTEYYPRTAIDI 123
Query: 219 FVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQS 278
FV VLQ D A I+ A++AL DA I M DLV + G +DP+ E Y ++
Sbjct: 124 FVEVLQADAGTRCAGISAASVALADAGIEMRDLVAACAAGKVEGKVVLDPMYYEDGYGEA 183
>sp|Q52EB3|ATG1_MAGO7 Serine/threonine-protein kinase ATG1 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=ATG1 PE=1 SV=1
Length = 982
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 21/126 (16%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
VAIK ++ ++++ +++ EI LK L H HIV + D + ++ +++EYC+ GDL
Sbjct: 45 VAIKSVELARLNKKLKENLYGEINILKTLRHPHIVALHDCVESATHINLMMEYCELGDLS 104
Query: 67 SFIRSHEKLS---------------------EFQCQQFVRQLVLALKFLRENNVCHFDLK 105
FI+ EKLS E + F++QL ALKFLRE+N+ H D+K
Sbjct: 105 LFIKKREKLSTNPATHDMARKYPNVPNSGLNEVVIRHFLKQLSSALKFLRESNLVHRDVK 164
Query: 106 PQNILI 111
PQN+L+
Sbjct: 165 PQNLLL 170
>sp|Q9QY01|ULK2_MOUSE Serine/threonine-protein kinase ULK2 OS=Mus musculus GN=Ulk2 PE=1
SV=1
Length = 1037
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAIK I+K +S+++ + EIK LK L H++IV + D V++++EYC+GGDL
Sbjct: 35 EVAIKSINKKNLSKSQI-LLGKEIKILKELQHENIVALYDVQELPNSVFLVMEYCNGGDL 93
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++++ LSE + F+ Q+ A++ L + H DLKPQNIL+
Sbjct: 94 ADYLQAKGTLSEDTIRVFLHQIAAAMRILHSKGIIHRDLKPQNILL 139
>sp|Q8IYT8|ULK2_HUMAN Serine/threonine-protein kinase ULK2 OS=Homo sapiens GN=ULK2 PE=1
SV=3
Length = 1036
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAIK I+K +S+++ + EIK LK L H++IV + D V++++EYC+GGDL
Sbjct: 35 EVAIKSINKKNLSKSQI-LLGKEIKILKELQHENIVALYDVQELPNSVFLVMEYCNGGDL 93
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++++ LSE + F+ Q+ A++ L + H DLKPQNIL+
Sbjct: 94 ADYLQAKGTLSEDTIRVFLHQIAAAMRILHSKGIIHRDLKPQNILL 139
>sp|Q5BCU8|ATG1_EMENI Serine/threonine-protein kinase atg1 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=atg1 PE=3 SV=1
Length = 935
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 21/131 (16%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ T VAIK ++ K++ D++ EI LK L H HIV +LD L ++++I+EYC
Sbjct: 45 KSRTFVAIKSVNLGKLNRKLKDNLAMEIDILKYLLHPHIVALLDCLETNSHIHLIMEYCA 104
Query: 62 GGDLCSFIR---------------------SHEKLSEFQCQQFVRQLVLALKFLRENNVC 100
GDL FI+ S L+E + F++QL AL+FLR+ N+
Sbjct: 105 LGDLSQFIKRRDSLKDHSYTRHMISKYPNVSGGALNEVIVRHFLKQLASALRFLRDKNLI 164
Query: 101 HFDLKPQNILI 111
H D+KPQN+L+
Sbjct: 165 HRDIKPQNLLL 175
>sp|Q975G8|ECX1_SULTO Probable exosome complex exonuclease 1 OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_04430 PE=3 SV=2
Length = 243
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 25/252 (9%)
Query: 105 KPQNILIKNNTLKLAGLKQ----------GVSEKAKGSAYIEQGNTKVICSVFEPREIPS 154
KP+ LI +N L+L G K GV + A GSA E GNTKVI +V+ P+E+
Sbjct: 6 KPR--LILDNGLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHP 63
Query: 155 SKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNF 214
+L + L V + PF++ R E EL ++ ALE + F
Sbjct: 64 RHLALP---DRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILVELFPRT 120
Query: 215 QVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVA 274
+D+F+ VLQ D ++ A++AL DA IPM DL+ + G+ +D E E
Sbjct: 121 VIDVFMEVLQADAGTRLVSLMAASMALADAGIPMRDLIAGVAVGKADGVLVLDLNEPEDM 180
Query: 275 YCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRV 334
+ ++ + ++ M ++QV + L G + + +E E++
Sbjct: 181 WGEA----------DMPVAMMPSLKQVALLQLNGNMTPQEFRQALEMAQKGIETIYNLEK 230
Query: 335 QKLVSDHVTLPE 346
+ + S + L E
Sbjct: 231 EAIRSKYAELKE 242
>sp|Q8VHF0|MARK3_RAT MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus
GN=Mark3 PE=2 SV=1
Length = 797
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 69/106 (65%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAIK IDKT+++ + E++ +K+L+H +IV + + + E+ +Y+I+EY GG++
Sbjct: 81 EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 140
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 141 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLL 186
>sp|Q9Y2K2|SIK3_HUMAN Serine/threonine-protein kinase SIK3 OS=Homo sapiens GN=SIK3 PE=1
SV=3
Length = 1263
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VAIK IDKT++ E I E++ +K+L H HI+ + + ER +Y++ EY GG+
Sbjct: 32 AKVAIKIIDKTQLDEENLKKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGE 91
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
+ + +H +++E + ++ +Q+V A+ F N+ H DLK +N+L+ N +K+A
Sbjct: 92 IFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLNIKIA 147
>sp|P27448|MARK3_HUMAN MAP/microtubule affinity-regulating kinase 3 OS=Homo sapiens
GN=MARK3 PE=1 SV=4
Length = 753
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 69/106 (65%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAIK IDKT+++ + E++ +K+L+H +IV + + + E+ +Y+I+EY GG++
Sbjct: 81 EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 140
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 141 FDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 186
>sp|A7KAL2|ATG1_PENCW Serine/threonine-protein kinase ATG1 OS=Penicillium chrysogenum
(strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255)
GN=atg1 PE=3 SV=1
Length = 960
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 21/128 (16%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VAIK ++ +K+++ +++ +EI LK LHH HIV ++D ++++++EYC GD
Sbjct: 46 TYVAIKSVNLSKLNKKLKENLSSEIDILKGLHHPHIVALIDCHESTSHIHLVMEYCALGD 105
Query: 65 LCSFIR------SHE---------------KLSEFQCQQFVRQLVLALKFLRENNVCHFD 103
L FI+ SH+ L+E + F++QL ALKFLR+ N+ H D
Sbjct: 106 LSLFIKRRDTLGSHKYTRDMIAKYPNPPGGSLNEVVTRHFLKQLSSALKFLRDRNLIHRD 165
Query: 104 LKPQNILI 111
+KPQN+L+
Sbjct: 166 IKPQNLLL 173
>sp|Q03141|MARK3_MOUSE MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus
GN=Mark3 PE=1 SV=2
Length = 753
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 69/106 (65%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
EVAIK IDKT+++ + E++ +K+L+H +IV + + + E+ +Y+I+EY GG++
Sbjct: 81 EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 140
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+
Sbjct: 141 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLL 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,682,141
Number of Sequences: 539616
Number of extensions: 6591168
Number of successful extensions: 22872
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1902
Number of HSP's successfully gapped in prelim test: 2225
Number of HSP's that attempted gapping in prelim test: 18734
Number of HSP's gapped (non-prelim): 4662
length of query: 477
length of database: 191,569,459
effective HSP length: 121
effective length of query: 356
effective length of database: 126,275,923
effective search space: 44954228588
effective search space used: 44954228588
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)