Query psy6508
Match_columns 477
No_of_seqs 538 out of 4224
Neff 8.8
Searched_HMMs 46136
Date Fri Aug 16 19:52:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6508.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6508hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1068|consensus 100.0 1.7E-37 3.7E-42 280.6 16.4 217 113-343 20-237 (245)
2 KOG0615|consensus 100.0 8.9E-36 1.9E-40 286.1 15.7 176 2-181 195-385 (475)
3 KOG0595|consensus 100.0 1.1E-35 2.4E-40 285.7 9.5 174 2-179 33-216 (429)
4 TIGR02065 ECX1 archaeal exosom 100.0 6.1E-33 1.3E-37 261.3 22.7 223 105-341 4-229 (230)
5 KOG0575|consensus 100.0 2.6E-34 5.5E-39 288.9 10.7 174 2-180 41-221 (592)
6 KOG0581|consensus 100.0 1.5E-34 3.2E-39 275.7 7.6 170 2-179 102-279 (364)
7 COG0689 Rph RNase PH [Translat 100.0 1E-32 2.3E-37 251.5 17.3 212 113-338 15-229 (230)
8 PRK03983 exosome complex exonu 100.0 8.8E-32 1.9E-36 255.7 21.8 216 114-343 22-237 (244)
9 KOG0598|consensus 100.0 2E-33 4.4E-38 267.9 8.7 177 2-182 48-230 (357)
10 KOG0616|consensus 100.0 1.8E-32 3.8E-37 253.4 8.0 171 2-180 67-244 (355)
11 KOG0592|consensus 100.0 2.2E-32 4.7E-37 270.9 5.9 178 2-181 96-291 (604)
12 KOG0600|consensus 100.0 3.3E-31 7.1E-36 260.6 13.1 193 2-205 140-340 (560)
13 KOG1069|consensus 100.0 4.8E-30 1E-34 223.1 16.3 207 115-344 4-214 (217)
14 KOG0591|consensus 100.0 3.7E-32 8E-37 249.5 2.2 174 2-180 42-231 (375)
15 KOG0583|consensus 100.0 5.4E-31 1.2E-35 264.3 10.7 176 2-180 40-226 (370)
16 KOG0198|consensus 100.0 1E-29 2.3E-34 246.0 16.7 174 3-179 41-224 (313)
17 KOG0659|consensus 100.0 1.4E-30 3.1E-35 237.4 9.2 191 2-205 25-222 (318)
18 KOG0611|consensus 100.0 6.3E-31 1.4E-35 251.6 6.1 175 2-182 76-258 (668)
19 KOG0661|consensus 100.0 4.1E-31 8.9E-36 258.2 3.6 184 2-199 33-224 (538)
20 KOG0597|consensus 100.0 1.4E-30 2.9E-35 258.5 7.3 196 2-202 25-235 (808)
21 KOG0192|consensus 100.0 2E-30 4.4E-35 258.0 8.2 174 4-180 64-249 (362)
22 KOG0593|consensus 100.0 1.7E-30 3.7E-35 240.7 6.9 187 2-199 25-216 (396)
23 KOG0588|consensus 100.0 5.3E-30 1.2E-34 258.9 9.9 175 2-181 35-216 (786)
24 KOG0578|consensus 100.0 6E-30 1.3E-34 255.5 9.2 208 2-217 296-518 (550)
25 KOG0582|consensus 100.0 1.9E-29 4.1E-34 244.8 11.8 175 2-181 49-236 (516)
26 KOG0605|consensus 100.0 1.4E-29 3.1E-34 251.1 8.7 176 2-180 164-391 (550)
27 KOG0610|consensus 100.0 2.7E-29 5.9E-34 241.9 10.2 179 2-183 100-341 (459)
28 KOG0594|consensus 100.0 5.2E-29 1.1E-33 237.5 10.8 191 2-204 34-240 (323)
29 KOG0660|consensus 100.0 2.3E-29 5.1E-34 239.3 7.5 175 2-179 45-230 (359)
30 PRK00173 rph ribonuclease PH; 100.0 2.7E-27 5.8E-32 223.8 21.1 210 114-339 9-237 (238)
31 cd05571 STKc_PKB Catalytic dom 100.0 5.4E-28 1.2E-32 240.6 16.5 174 2-179 18-197 (323)
32 KOG0585|consensus 100.0 8.4E-29 1.8E-33 241.8 9.1 174 2-180 120-322 (576)
33 KOG0658|consensus 100.0 1.7E-29 3.8E-34 240.6 3.4 228 2-246 47-313 (364)
34 KOG0663|consensus 100.0 1.8E-28 3.9E-33 230.2 9.6 188 2-201 99-294 (419)
35 TIGR01966 RNasePH ribonuclease 100.0 9.3E-27 2E-31 220.0 21.3 209 114-338 8-235 (236)
36 KOG0589|consensus 100.0 2E-28 4.3E-33 243.1 10.0 175 2-181 27-210 (426)
37 cd05594 STKc_PKB_alpha Catalyt 99.9 3.6E-27 7.8E-32 234.9 18.4 174 2-179 18-198 (325)
38 cd05582 STKc_RSK_N N-terminal 99.9 2.7E-27 5.9E-32 235.0 17.2 174 2-179 22-200 (318)
39 KOG0667|consensus 99.9 9.6E-28 2.1E-32 244.0 13.5 183 2-200 209-403 (586)
40 PTZ00426 cAMP-dependent protei 99.9 1.3E-27 2.9E-32 239.4 13.6 170 4-180 56-231 (340)
41 PTZ00263 protein kinase A cata 99.9 7.8E-28 1.7E-32 240.1 11.7 171 2-179 41-217 (329)
42 cd05593 STKc_PKB_gamma Catalyt 99.9 2.2E-27 4.8E-32 236.8 14.5 174 2-179 18-197 (328)
43 KOG0033|consensus 99.9 3.8E-29 8.2E-34 225.5 1.6 174 2-179 34-214 (355)
44 cd05629 STKc_NDR_like_fungal C 99.9 1.1E-27 2.4E-32 243.5 12.4 176 2-179 24-250 (377)
45 KOG0586|consensus 99.9 1.3E-27 2.8E-32 240.8 12.6 174 2-181 79-259 (596)
46 cd05585 STKc_YPK1_like Catalyt 99.9 1.3E-27 2.8E-32 236.7 11.9 174 2-179 16-195 (312)
47 cd05598 STKc_LATS Catalytic do 99.9 3E-27 6.5E-32 240.2 13.8 177 2-180 24-247 (376)
48 cd05599 STKc_NDR_like Catalyti 99.9 1.3E-27 2.9E-32 241.7 11.1 176 2-179 24-241 (364)
49 cd05595 STKc_PKB_beta Catalyti 99.9 2.2E-27 4.8E-32 236.2 12.5 174 2-179 18-197 (323)
50 cd05584 STKc_p70S6K Catalytic 99.9 3.1E-27 6.8E-32 235.1 13.4 174 2-179 22-202 (323)
51 TIGR02696 pppGpp_PNP guanosine 99.9 2.1E-26 4.7E-31 241.0 20.1 274 104-393 330-642 (719)
52 cd05627 STKc_NDR2 Catalytic do 99.9 4.2E-27 9.1E-32 237.8 14.4 176 2-179 24-238 (360)
53 cd05628 STKc_NDR1 Catalytic do 99.9 9.4E-28 2E-32 242.8 9.6 176 2-179 24-238 (363)
54 KOG0694|consensus 99.9 3.3E-28 7.1E-33 247.7 6.1 172 2-179 391-570 (694)
55 cd05612 STKc_PRKX_like Catalyt 99.9 7.5E-28 1.6E-32 236.0 8.3 171 2-179 24-200 (291)
56 KOG0032|consensus 99.9 1.6E-27 3.4E-32 239.3 10.6 175 2-181 58-242 (382)
57 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 3.1E-27 6.6E-32 236.2 12.5 171 2-179 24-200 (333)
58 cd05626 STKc_LATS2 Catalytic d 99.9 2.7E-27 6E-32 241.0 11.5 176 2-179 24-250 (381)
59 cd05573 STKc_ROCK_NDR_like Cat 99.9 6E-27 1.3E-31 235.5 13.1 175 2-179 24-232 (350)
60 cd05575 STKc_SGK Catalytic dom 99.9 1.9E-26 4.1E-31 229.5 16.2 174 2-179 18-198 (323)
61 KOG0607|consensus 99.9 3.5E-28 7.7E-33 226.7 3.3 176 2-180 101-294 (463)
62 KOG0580|consensus 99.9 3.9E-28 8.5E-33 218.6 3.2 172 2-180 45-225 (281)
63 cd05586 STKc_Sck1_like Catalyt 99.9 3.2E-26 6.9E-31 228.5 17.1 174 2-179 16-199 (330)
64 cd05625 STKc_LATS1 Catalytic d 99.9 4E-27 8.6E-32 239.9 10.8 176 2-179 24-250 (382)
65 cd05603 STKc_SGK2 Catalytic do 99.9 2E-26 4.3E-31 229.1 15.5 174 2-179 18-198 (321)
66 cd05604 STKc_SGK3 Catalytic do 99.9 2.6E-26 5.7E-31 228.7 16.2 174 2-179 18-198 (325)
67 KOG4717|consensus 99.9 5.1E-27 1.1E-31 230.7 10.3 173 3-181 42-223 (864)
68 cd05592 STKc_nPKC_theta_delta 99.9 9E-27 2E-31 231.1 12.2 174 2-179 18-198 (316)
69 cd05588 STKc_aPKC Catalytic do 99.9 1E-26 2.2E-31 232.1 12.4 174 2-179 18-198 (329)
70 cd05601 STKc_CRIK Catalytic do 99.9 3.7E-26 8E-31 228.0 16.0 175 2-179 24-211 (330)
71 cd05614 STKc_MSK2_N N-terminal 99.9 3.1E-26 6.7E-31 228.8 15.1 175 2-179 26-209 (332)
72 KOG4236|consensus 99.9 2.2E-26 4.7E-31 226.8 13.4 174 1-179 586-768 (888)
73 cd05591 STKc_nPKC_epsilon Cata 99.9 2E-26 4.3E-31 229.1 13.1 174 2-179 18-198 (321)
74 KOG0197|consensus 99.9 1.7E-26 3.6E-31 230.3 12.3 169 5-179 231-407 (468)
75 KOG0599|consensus 99.9 1.3E-27 2.8E-32 218.6 3.9 171 2-178 40-229 (411)
76 cd05590 STKc_nPKC_eta Catalyti 99.9 1.3E-26 2.9E-31 230.4 11.0 174 2-179 18-198 (320)
77 KOG0194|consensus 99.9 7E-26 1.5E-30 229.0 16.2 169 7-180 189-366 (474)
78 cd05602 STKc_SGK1 Catalytic do 99.9 4E-26 8.7E-31 227.3 14.4 174 2-179 18-198 (325)
79 cd05618 STKc_aPKC_iota Catalyt 99.9 2.8E-26 6.2E-31 228.9 13.3 174 2-179 18-198 (329)
80 cd05621 STKc_ROCK2 Catalytic d 99.9 1.6E-26 3.5E-31 234.3 11.5 174 2-179 66-249 (370)
81 KOG4250|consensus 99.9 3.2E-27 6.9E-32 241.1 6.2 173 2-179 36-226 (732)
82 cd05102 PTKc_VEGFR3 Catalytic 99.9 1.1E-26 2.5E-31 232.4 9.6 174 3-179 36-279 (338)
83 PHA02988 hypothetical protein; 99.9 3.3E-27 7.2E-32 230.5 5.5 170 3-179 42-224 (283)
84 KOG0201|consensus 99.9 1.1E-27 2.3E-32 232.5 1.6 175 1-181 35-215 (467)
85 PTZ00267 NIMA-related protein 99.9 3.6E-26 7.8E-31 239.3 13.3 172 4-179 93-273 (478)
86 cd05597 STKc_DMPK_like Catalyt 99.9 4.6E-26 1E-30 227.6 13.2 175 2-179 24-210 (331)
87 cd05631 STKc_GRK4 Catalytic do 99.9 3.5E-26 7.5E-31 223.4 12.1 173 2-179 23-203 (285)
88 cd05617 STKc_aPKC_zeta Catalyt 99.9 3.9E-26 8.5E-31 227.7 12.6 174 2-179 18-198 (327)
89 cd05622 STKc_ROCK1 Catalytic d 99.9 2.7E-26 6E-31 232.7 10.7 174 2-179 66-249 (371)
90 KOG0604|consensus 99.9 7.7E-27 1.7E-31 216.2 6.0 205 2-217 85-317 (400)
91 cd05620 STKc_nPKC_delta Cataly 99.9 3.7E-26 8E-31 226.7 11.3 174 2-179 18-198 (316)
92 cd05589 STKc_PKN Catalytic dom 99.9 3.8E-26 8.3E-31 227.4 11.3 173 2-179 22-203 (324)
93 cd05596 STKc_ROCK Catalytic do 99.9 2.5E-26 5.3E-31 233.0 9.8 174 2-179 66-249 (370)
94 cd05608 STKc_GRK1 Catalytic do 99.9 8.8E-27 1.9E-31 227.1 6.0 174 2-179 16-199 (280)
95 cd05587 STKc_cPKC Catalytic do 99.9 7.9E-26 1.7E-30 225.1 12.9 174 2-179 23-203 (324)
96 KOG4645|consensus 99.9 9.9E-27 2.1E-31 250.0 6.4 177 2-180 1258-1444(1509)
97 cd05570 STKc_PKC Catalytic dom 99.9 5.6E-26 1.2E-30 225.6 11.4 174 2-179 18-198 (318)
98 cd05096 PTKc_DDR1 Catalytic do 99.9 3.4E-26 7.3E-31 225.5 9.7 166 4-172 46-233 (304)
99 cd05616 STKc_cPKC_beta Catalyt 99.9 8.7E-26 1.9E-30 224.7 12.4 174 2-179 23-203 (323)
100 cd07869 STKc_PFTAIRE1 Catalyti 99.9 1.7E-26 3.7E-31 227.6 7.2 172 2-179 28-206 (303)
101 cd05106 PTKc_CSF-1R Catalytic 99.9 1.6E-26 3.5E-31 234.6 6.9 174 3-179 67-317 (374)
102 cd05624 STKc_MRCK_beta Catalyt 99.9 1.2E-25 2.5E-30 224.6 12.9 175 2-179 24-210 (331)
103 cd05619 STKc_nPKC_theta Cataly 99.9 8.1E-26 1.8E-30 224.3 11.5 174 2-179 18-198 (316)
104 cd07848 STKc_CDKL5 Catalytic d 99.9 3E-26 6.5E-31 223.7 8.3 175 2-179 24-203 (287)
105 KOG4721|consensus 99.9 1.2E-26 2.6E-31 230.4 5.4 186 3-203 146-349 (904)
106 cd07859 STKc_TDY_MAPK_plant Ca 99.9 3.2E-26 6.9E-31 228.9 8.0 175 2-179 23-210 (338)
107 cd06649 PKc_MEK2 Catalytic dom 99.9 3.4E-26 7.5E-31 228.4 8.2 171 2-179 28-204 (331)
108 cd05615 STKc_cPKC_alpha Cataly 99.9 8.7E-26 1.9E-30 224.8 10.8 174 2-179 23-203 (323)
109 cd07871 STKc_PCTAIRE3 Catalyti 99.9 8.9E-26 1.9E-30 220.9 10.6 172 2-179 28-206 (288)
110 KOG1187|consensus 99.9 7.8E-26 1.7E-30 226.5 10.4 164 3-172 98-271 (361)
111 cd06650 PKc_MEK1 Catalytic dom 99.9 4.6E-26 1E-30 227.7 8.7 171 2-179 28-204 (333)
112 KOG4279|consensus 99.9 1.5E-25 3.3E-30 226.9 12.1 200 2-208 598-822 (1226)
113 cd05104 PTKc_Kit Catalytic dom 99.9 3E-26 6.5E-31 232.8 7.2 174 3-179 64-319 (375)
114 KOG0596|consensus 99.9 4.7E-26 1E-30 226.2 7.8 173 3-179 384-574 (677)
115 TIGR03591 polynuc_phos polyrib 99.9 2.5E-24 5.4E-29 230.5 21.6 274 104-392 305-614 (684)
116 cd05048 PTKc_Ror Catalytic Dom 99.9 3E-25 6.6E-30 216.1 13.0 174 3-179 34-229 (283)
117 cd08529 STKc_FA2-like Catalyti 99.9 5.3E-26 1.1E-30 217.7 7.0 174 2-179 23-203 (256)
118 cd05607 STKc_GRK7 Catalytic do 99.9 5.9E-26 1.3E-30 220.9 6.9 173 2-179 16-196 (277)
119 KOG0662|consensus 99.9 1.3E-25 2.8E-30 193.9 8.0 190 2-202 25-220 (292)
120 KOG1026|consensus 99.9 3.1E-25 6.8E-30 231.5 12.3 174 3-179 515-708 (774)
121 PTZ00283 serine/threonine prot 99.9 4.1E-26 8.9E-31 239.4 5.5 176 2-179 55-247 (496)
122 cd05605 STKc_GRK4_like Catalyt 99.9 3.6E-25 7.7E-30 216.3 11.7 173 2-179 23-203 (285)
123 cd05084 PTKc_Fes Catalytic dom 99.9 4.5E-25 9.6E-30 211.2 12.1 174 2-178 18-198 (252)
124 cd05049 PTKc_Trk Catalytic dom 99.9 3.5E-25 7.6E-30 215.1 11.5 174 3-179 34-227 (280)
125 cd06625 STKc_MEKK3_like Cataly 99.9 6.2E-25 1.3E-29 211.3 12.7 176 2-179 25-209 (263)
126 cd08227 PK_STRAD_alpha Pseudok 99.9 4.6E-25 1E-29 219.9 12.1 176 2-179 23-212 (327)
127 cd05064 PTKc_EphR_A10 Catalyti 99.9 3.3E-25 7.1E-30 214.2 10.5 173 3-179 32-211 (266)
128 PRK11824 polynucleotide phosph 99.9 6.1E-24 1.3E-28 228.1 21.3 230 99-343 304-546 (693)
129 cd05116 PTKc_Syk Catalytic dom 99.9 8.8E-25 1.9E-29 209.9 12.8 175 2-179 20-201 (257)
130 cd05093 PTKc_TrkB Catalytic do 99.9 8.2E-25 1.8E-29 213.9 12.6 173 3-179 34-225 (288)
131 cd05623 STKc_MRCK_alpha Cataly 99.9 3.5E-25 7.6E-30 221.3 9.8 175 2-179 24-210 (332)
132 PRK13184 pknD serine/threonine 99.9 1.8E-25 4E-30 242.5 8.3 175 2-179 25-233 (932)
133 cd08221 STKc_Nek9 Catalytic do 99.9 2.3E-25 5E-30 213.5 8.0 174 2-179 23-203 (256)
134 KOG0193|consensus 99.9 1.4E-25 3E-30 225.3 6.6 172 5-182 415-598 (678)
135 PLN00034 mitogen-activated pro 99.9 6.5E-25 1.4E-29 221.2 11.6 168 2-178 97-274 (353)
136 KOG0577|consensus 99.9 2.2E-25 4.8E-30 222.3 7.9 168 2-179 49-227 (948)
137 PHA03212 serine/threonine kina 99.9 6E-25 1.3E-29 224.2 11.3 164 2-178 115-284 (391)
138 cd05062 PTKc_IGF-1R Catalytic 99.9 7.7E-25 1.7E-29 212.8 11.5 174 3-179 35-224 (277)
139 KOG0574|consensus 99.9 1.9E-25 4.1E-30 206.9 6.7 171 1-180 55-232 (502)
140 cd05580 STKc_PKA Catalytic dom 99.9 9.5E-25 2.1E-29 213.7 12.0 171 2-179 24-200 (290)
141 cd06630 STKc_MEKK1 Catalytic d 99.9 1.5E-25 3.4E-30 216.1 6.1 177 2-179 23-210 (268)
142 PTZ00036 glycogen synthase kin 99.9 1.9E-25 4.2E-30 231.3 7.2 167 2-179 89-273 (440)
143 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.6E-25 3.5E-30 228.8 6.5 173 4-179 67-342 (400)
144 cd05572 STKc_cGK_PKG Catalytic 99.9 1.3E-24 2.8E-29 209.2 12.4 173 2-179 16-194 (262)
145 cd05036 PTKc_ALK_LTK Catalytic 99.9 6.6E-25 1.4E-29 213.3 10.3 175 3-179 35-224 (277)
146 cd06645 STKc_MAP4K3 Catalytic 99.9 3.1E-25 6.7E-30 214.1 7.8 171 2-178 32-210 (267)
147 KOG0584|consensus 99.9 7.7E-26 1.7E-30 228.4 3.6 197 3-204 64-283 (632)
148 cd08219 STKc_Nek3 Catalytic do 99.9 9.7E-24 2.1E-28 202.3 17.9 173 2-179 23-202 (255)
149 cd07853 STKc_NLK Catalytic dom 99.9 6.8E-25 1.5E-29 222.7 10.2 174 2-179 23-207 (372)
150 cd05094 PTKc_TrkC Catalytic do 99.9 2E-24 4.4E-29 211.5 13.0 172 3-178 34-227 (291)
151 cd05035 PTKc_Axl_like Catalyti 99.9 1.3E-24 2.7E-29 210.2 11.2 175 3-179 26-218 (273)
152 cd05578 STKc_Yank1 Catalytic d 99.9 7.6E-25 1.7E-29 210.3 9.5 174 2-180 23-202 (258)
153 cd08220 STKc_Nek8 Catalytic do 99.9 4.6E-25 9.9E-30 211.2 7.8 174 2-179 23-203 (256)
154 cd07862 STKc_CDK6 Catalytic do 99.9 1.4E-24 3.1E-29 212.2 11.3 171 3-179 26-211 (290)
155 cd05092 PTKc_TrkA Catalytic do 99.9 1.5E-24 3.2E-29 211.2 11.3 173 3-179 34-227 (280)
156 PTZ00266 NIMA-related protein 99.9 3.7E-25 8E-30 241.1 7.7 174 2-179 36-245 (1021)
157 cd00192 PTKc Catalytic domain 99.9 1.2E-24 2.5E-29 208.5 10.0 174 3-179 22-210 (262)
158 cd05609 STKc_MAST Catalytic do 99.9 3.9E-25 8.5E-30 218.1 6.8 176 2-179 24-218 (305)
159 cd08228 STKc_Nek6 Catalytic do 99.9 4.5E-25 9.8E-30 212.9 7.0 174 2-179 25-208 (267)
160 PHA03207 serine/threonine kina 99.9 6.8E-25 1.5E-29 224.2 8.4 168 2-179 117-289 (392)
161 cd05090 PTKc_Ror1 Catalytic do 99.9 1.8E-24 4E-29 210.8 11.0 174 3-179 33-229 (283)
162 cd07876 STKc_JNK2 Catalytic do 99.9 1.3E-24 2.8E-29 219.5 10.1 170 2-179 44-224 (359)
163 cd05051 PTKc_DDR Catalytic dom 99.9 8E-25 1.7E-29 214.5 8.3 167 3-172 45-225 (296)
164 cd06628 STKc_MAPKKK_Byr2_like 99.9 3E-24 6.4E-29 207.1 12.1 176 2-179 23-214 (267)
165 KOG0690|consensus 99.9 2.5E-25 5.4E-30 208.1 4.4 174 2-180 191-371 (516)
166 cd05091 PTKc_Ror2 Catalytic do 99.9 3.1E-25 6.7E-30 216.1 5.3 172 3-178 34-228 (283)
167 KOG1989|consensus 99.9 5E-25 1.1E-29 230.9 7.1 196 3-202 61-291 (738)
168 cd05632 STKc_GRK5 Catalytic do 99.9 6.7E-25 1.4E-29 214.4 7.3 173 2-179 23-203 (285)
169 cd05032 PTKc_InsR_like Catalyt 99.9 1.3E-24 2.8E-29 210.8 8.8 173 3-178 35-223 (277)
170 cd05052 PTKc_Abl Catalytic dom 99.9 1.1E-24 2.3E-29 210.1 8.1 171 2-178 29-207 (263)
171 cd05053 PTKc_FGFR Catalytic do 99.9 7.5E-24 1.6E-28 207.4 14.3 174 3-179 41-237 (293)
172 cd06646 STKc_MAP4K5 Catalytic 99.9 3.3E-24 7.2E-29 206.9 11.6 171 2-178 32-210 (267)
173 cd05068 PTKc_Frk_like Catalyti 99.9 1.2E-24 2.7E-29 209.3 8.5 172 2-179 28-207 (261)
174 cd06611 STKc_SLK_like Catalyti 99.9 6.9E-25 1.5E-29 213.3 6.8 172 2-179 28-210 (280)
175 cd05060 PTKc_Syk_like Catalyti 99.9 8.9E-25 1.9E-29 209.8 7.1 173 3-179 22-201 (257)
176 cd08229 STKc_Nek7 Catalytic do 99.9 7.8E-25 1.7E-29 211.2 6.7 174 2-179 25-208 (267)
177 cd07868 STKc_CDK8 Catalytic do 99.9 3.6E-24 7.8E-29 212.2 11.6 173 2-180 26-219 (317)
178 cd05630 STKc_GRK6 Catalytic do 99.9 3.9E-24 8.5E-29 209.0 11.7 173 2-179 23-203 (285)
179 cd05577 STKc_GRK Catalytic dom 99.9 2.9E-24 6.4E-29 208.7 10.7 173 2-179 16-196 (277)
180 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 9.1E-25 2E-29 210.5 7.1 174 2-179 25-208 (267)
181 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 1.5E-24 3.2E-29 211.4 8.6 174 2-179 31-212 (283)
182 cd07878 STKc_p38beta_MAPK11 Ca 99.9 1.2E-24 2.7E-29 218.2 8.3 168 2-179 38-218 (343)
183 cd06643 STKc_SLK Catalytic dom 99.9 2.1E-24 4.6E-29 210.2 9.6 172 2-179 28-210 (282)
184 PF07714 Pkinase_Tyr: Protein 99.9 1.9E-25 4E-30 215.3 1.9 175 2-179 26-208 (259)
185 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 2.4E-24 5.3E-29 208.3 9.6 174 3-179 21-212 (269)
186 KOG2345|consensus 99.9 3.6E-25 7.7E-30 200.4 3.5 211 3-217 45-291 (302)
187 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 4.5E-24 9.7E-29 207.4 11.5 166 5-179 45-224 (274)
188 cd08216 PK_STRAD Pseudokinase 99.9 5.4E-24 1.2E-28 210.6 12.3 175 2-179 23-212 (314)
189 cd05075 PTKc_Axl Catalytic dom 99.9 3.5E-24 7.6E-29 207.2 10.7 172 6-179 28-217 (272)
190 cd05054 PTKc_VEGFR Catalytic d 99.9 1.3E-24 2.8E-29 217.7 7.8 174 3-179 36-278 (337)
191 cd05040 PTKc_Ack_like Catalyti 99.9 1.5E-24 3.2E-29 208.0 7.8 170 5-178 24-202 (257)
192 cd06631 STKc_YSK4 Catalytic do 99.9 9.3E-25 2E-29 210.5 6.5 176 2-179 22-210 (265)
193 cd05055 PTKc_PDGFR Catalytic d 99.9 1.5E-24 3.3E-29 213.7 8.1 174 3-179 64-246 (302)
194 cd05041 PTKc_Fes_like Catalyti 99.9 7.3E-24 1.6E-28 202.5 12.5 173 4-179 19-198 (251)
195 cd05101 PTKc_FGFR2 Catalytic d 99.9 5.5E-24 1.2E-28 209.7 11.9 172 4-178 47-241 (304)
196 cd05044 PTKc_c-ros Catalytic d 99.9 6.4E-25 1.4E-29 212.0 5.2 174 4-179 26-216 (269)
197 cd07861 STKc_CDK1_euk Catalyti 99.9 4.9E-24 1.1E-28 207.7 11.4 173 2-179 23-204 (285)
198 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 1.6E-23 3.5E-28 203.7 14.9 175 2-179 31-214 (284)
199 cd08226 PK_STRAD_beta Pseudoki 99.9 5.7E-24 1.2E-28 212.1 12.0 175 2-179 23-212 (328)
200 cd06619 PKc_MKK5 Catalytic dom 99.9 1.3E-24 2.7E-29 211.6 7.1 167 2-179 24-195 (279)
201 cd08223 STKc_Nek4 Catalytic do 99.9 1.5E-24 3.2E-29 208.0 7.5 173 2-178 23-203 (257)
202 cd05097 PTKc_DDR_like Catalyti 99.9 2.8E-24 6.1E-29 210.9 9.5 165 5-172 45-224 (295)
203 cd06615 PKc_MEK Catalytic doma 99.9 4.6E-24 9.9E-29 210.9 11.0 170 2-178 24-199 (308)
204 cd06652 STKc_MEKK2 Catalytic d 99.9 8.2E-24 1.8E-28 204.0 12.4 176 2-179 25-211 (265)
205 cd06654 STKc_PAK1 Catalytic do 99.9 9.4E-25 2E-29 214.5 5.9 171 2-179 43-218 (296)
206 cd05072 PTKc_Lyn Catalytic dom 99.9 1.7E-24 3.7E-29 208.2 7.5 172 2-179 28-207 (261)
207 cd07874 STKc_JNK3 Catalytic do 99.9 3.1E-24 6.7E-29 216.4 9.7 170 2-179 40-220 (355)
208 cd05033 PTKc_EphR Catalytic do 99.9 6.1E-24 1.3E-28 205.0 11.4 173 3-178 31-210 (266)
209 cd05046 PTK_CCK4 Pseudokinase 99.9 1.5E-24 3.3E-29 210.2 7.2 171 3-178 34-220 (275)
210 cd07872 STKc_PCTAIRE2 Catalyti 99.9 4.6E-24 1E-28 210.8 10.7 172 2-179 29-207 (309)
211 cd05099 PTKc_FGFR4 Catalytic d 99.9 9.6E-24 2.1E-28 209.1 13.0 173 4-179 44-239 (314)
212 KOG0984|consensus 99.9 4.2E-24 9.2E-29 188.5 9.1 170 2-179 69-254 (282)
213 cd05115 PTKc_Zap-70 Catalytic 99.9 9.3E-24 2E-28 203.1 12.4 173 3-179 21-201 (257)
214 cd05574 STKc_phototropin_like 99.9 4.7E-24 1E-28 211.4 10.6 176 2-179 24-234 (316)
215 cd07863 STKc_CDK4 Catalytic do 99.9 1.9E-24 4E-29 211.1 7.6 171 2-178 23-208 (288)
216 cd07875 STKc_JNK1 Catalytic do 99.9 3.7E-24 7.9E-29 216.6 9.9 170 2-179 47-227 (364)
217 cd06653 STKc_MEKK3_like_1 Cata 99.9 1.3E-23 2.7E-28 202.7 13.1 176 2-179 25-211 (264)
218 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 3.3E-23 7.2E-28 202.1 16.2 169 2-173 31-206 (284)
219 cd05113 PTKc_Btk_Bmx Catalytic 99.9 2.4E-24 5.1E-29 207.0 7.9 169 4-178 28-203 (256)
220 cd06623 PKc_MAPKK_plant_like C 99.9 2.9E-24 6.3E-29 206.5 8.4 173 2-180 24-203 (264)
221 cd05114 PTKc_Tec_Rlk Catalytic 99.9 2.9E-24 6.3E-29 206.1 8.3 171 3-179 27-204 (256)
222 cd07847 STKc_CDKL1_4 Catalytic 99.9 4E-24 8.7E-29 208.3 9.4 174 2-179 24-203 (286)
223 cd05061 PTKc_InsR Catalytic do 99.9 8.9E-24 1.9E-28 206.6 11.8 174 3-179 35-224 (288)
224 KOG0986|consensus 99.9 4.2E-25 9.2E-30 214.7 2.3 172 2-179 208-388 (591)
225 PHA03211 serine/threonine kina 99.9 6.9E-24 1.5E-28 219.7 11.5 160 2-172 192-355 (461)
226 cd05095 PTKc_DDR2 Catalytic do 99.9 2.7E-24 5.8E-29 211.2 7.9 173 3-178 45-235 (296)
227 cd06658 STKc_PAK5 Catalytic do 99.9 9.2E-25 2E-29 214.2 4.6 171 2-179 45-220 (292)
228 cd05045 PTKc_RET Catalytic dom 99.9 1.9E-24 4.2E-29 211.5 6.8 173 4-179 30-232 (290)
229 cd06655 STKc_PAK2 Catalytic do 99.9 1.8E-24 3.9E-29 212.6 6.6 171 2-179 42-217 (296)
230 cd06609 STKc_MST3_like Catalyt 99.9 2E-24 4.4E-29 209.3 7.0 171 2-179 24-200 (274)
231 cd06613 STKc_MAP4K3_like Catal 99.9 1.8E-23 3.9E-28 200.8 13.5 172 2-179 26-206 (262)
232 cd05042 PTKc_Aatyk Catalytic d 99.9 3.1E-24 6.7E-29 207.5 8.2 171 4-178 22-211 (269)
233 cd06644 STKc_STK10_LOK Catalyt 99.9 3.4E-24 7.5E-29 209.9 8.5 172 2-179 35-217 (292)
234 PLN00009 cyclin-dependent kina 99.9 4E-24 8.8E-29 209.5 9.0 174 2-179 25-206 (294)
235 cd05085 PTKc_Fer Catalytic dom 99.9 1E-23 2.2E-28 201.4 11.4 174 2-179 17-197 (250)
236 cd05098 PTKc_FGFR1 Catalytic d 99.9 5.5E-24 1.2E-28 210.1 9.9 173 4-179 50-245 (307)
237 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 1.1E-23 2.4E-28 203.2 11.8 166 5-179 33-212 (262)
238 cd06656 STKc_PAK3 Catalytic do 99.9 8.5E-24 1.8E-28 207.9 11.0 172 2-180 42-218 (297)
239 PF00069 Pkinase: Protein kina 99.9 1.3E-24 2.9E-29 208.3 5.1 174 2-179 22-201 (260)
240 cd06606 STKc_MAPKKK Catalytic 99.9 1.6E-23 3.4E-28 200.1 12.4 177 2-180 23-206 (260)
241 cd05065 PTKc_EphR_B Catalytic 99.9 1.4E-23 2.9E-28 203.0 12.0 172 5-179 33-214 (269)
242 cd06624 STKc_ASK Catalytic dom 99.9 1.7E-23 3.7E-28 202.1 12.6 173 2-179 31-213 (268)
243 cd05109 PTKc_HER2 Catalytic do 99.9 9.8E-24 2.1E-28 205.2 10.8 170 6-179 38-214 (279)
244 KOG1152|consensus 99.9 9.4E-24 2E-28 210.5 10.7 170 2-178 584-770 (772)
245 KOG0666|consensus 99.9 8.7E-25 1.9E-29 203.5 2.9 166 5-172 54-233 (438)
246 cd05108 PTKc_EGFR Catalytic do 99.9 1.1E-23 2.3E-28 209.0 10.9 171 5-179 37-214 (316)
247 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 1E-23 2.2E-28 205.7 10.6 171 2-179 24-209 (286)
248 KOG1095|consensus 99.9 1.6E-24 3.4E-29 233.9 5.3 172 5-179 723-907 (1025)
249 cd05100 PTKc_FGFR3 Catalytic d 99.9 2.3E-23 4.9E-28 208.3 13.2 172 5-179 45-239 (334)
250 cd06629 STKc_MAPKKK_Bck1_like 99.9 1.1E-23 2.4E-28 203.9 10.5 176 2-179 24-214 (272)
251 KOG0579|consensus 99.9 4E-25 8.6E-30 221.8 0.3 195 4-205 57-276 (1187)
252 cd05059 PTKc_Tec_like Catalyti 99.9 1.1E-23 2.3E-28 202.3 10.0 170 3-178 27-203 (256)
253 cd08225 STKc_Nek5 Catalytic do 99.9 1.4E-24 3.1E-29 207.9 3.9 175 2-179 23-204 (257)
254 KOG0614|consensus 99.9 1.2E-25 2.7E-30 220.8 -3.6 170 6-181 447-623 (732)
255 cd05086 PTKc_Aatyk2 Catalytic 99.9 2.1E-23 4.6E-28 201.7 12.0 171 5-178 23-210 (268)
256 cd07832 STKc_CCRK Catalytic do 99.9 1.7E-23 3.6E-28 203.9 11.3 173 2-178 23-202 (286)
257 cd05050 PTKc_Musk Catalytic do 99.9 1.6E-23 3.4E-28 204.7 11.1 173 3-178 34-234 (288)
258 cd05088 PTKc_Tie2 Catalytic do 99.9 1.6E-23 3.4E-28 206.6 11.1 168 6-179 36-226 (303)
259 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 1.8E-24 3.9E-29 208.0 4.2 159 5-172 28-198 (258)
260 cd05606 STKc_beta_ARK Catalyti 99.9 2.6E-23 5.7E-28 202.3 12.4 172 2-179 17-198 (278)
261 cd05611 STKc_Rim15_like Cataly 99.9 3.8E-24 8.3E-29 205.7 6.3 170 2-179 19-195 (260)
262 cd05074 PTKc_Tyro3 Catalytic d 99.9 2.9E-23 6.4E-28 200.9 12.6 175 3-179 26-218 (273)
263 PLN00207 polyribonucleotide nu 99.9 3E-22 6.4E-27 214.3 21.2 225 104-343 433-677 (891)
264 cd05633 STKc_GRK3 Catalytic do 99.9 1.9E-23 4.2E-28 203.5 11.3 172 2-179 17-198 (279)
265 cd05066 PTKc_EphR_A Catalytic 99.9 2.2E-23 4.8E-28 201.3 11.6 173 4-179 32-212 (267)
266 cd06640 STKc_MST4 Catalytic do 99.9 3E-23 6.5E-28 201.6 12.6 172 2-179 27-203 (277)
267 cd08218 STKc_Nek1 Catalytic do 99.9 1.5E-23 3.2E-28 201.0 10.3 173 2-178 23-202 (256)
268 PHA03390 pk1 serine/threonine- 99.9 5E-24 1.1E-28 206.2 6.9 164 2-179 39-208 (267)
269 cd07873 STKc_PCTAIRE1 Catalyti 99.9 1E-23 2.3E-28 207.5 9.3 172 2-179 29-207 (301)
270 cd06651 STKc_MEKK3 Catalytic d 99.9 2.9E-23 6.3E-28 200.4 12.2 176 2-179 25-211 (266)
271 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 2.1E-23 4.5E-28 203.5 11.2 171 2-179 28-204 (284)
272 cd06626 STKc_MEKK4 Catalytic d 99.9 4E-23 8.6E-28 198.7 12.9 176 2-179 23-208 (264)
273 cd07841 STKc_CDK7 Catalytic do 99.9 1.6E-23 3.5E-28 205.6 10.4 172 2-178 23-204 (298)
274 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.1E-23 2.5E-28 202.4 9.1 171 3-179 29-207 (261)
275 KOG0612|consensus 99.9 5.4E-25 1.2E-29 233.9 -0.2 173 2-180 98-284 (1317)
276 cd06614 STKc_PAK Catalytic dom 99.9 5.6E-24 1.2E-28 207.7 6.9 169 3-179 43-218 (286)
277 cd05107 PTKc_PDGFR_beta Cataly 99.9 2.5E-23 5.4E-28 212.7 11.9 174 3-179 66-344 (401)
278 cd06917 STKc_NAK1_like Catalyt 99.9 4.7E-24 1E-28 207.0 6.3 172 2-179 24-204 (277)
279 cd06605 PKc_MAPKK Catalytic do 99.9 2.1E-24 4.6E-29 207.8 3.7 171 2-179 24-201 (265)
280 cd06610 STKc_OSR1_SPAK Catalyt 99.9 3.2E-23 7E-28 199.5 11.9 175 2-179 24-209 (267)
281 cd05576 STKc_RPK118_like Catal 99.9 1.3E-23 2.8E-28 199.6 9.0 162 2-178 16-183 (237)
282 smart00219 TyrKc Tyrosine kina 99.9 3.3E-23 7.1E-28 198.3 11.9 171 4-178 28-206 (258)
283 cd08215 STKc_Nek Catalytic dom 99.9 7.1E-24 1.5E-28 202.6 7.2 174 2-179 23-205 (258)
284 cd07839 STKc_CDK5 Catalytic do 99.9 6.1E-24 1.3E-28 207.0 6.9 171 2-177 23-200 (284)
285 cd05089 PTKc_Tie1 Catalytic do 99.9 2.9E-23 6.4E-28 203.9 11.8 168 6-179 31-221 (297)
286 cd07846 STKc_CDKL2_3 Catalytic 99.9 6.8E-24 1.5E-28 206.7 7.1 173 2-178 24-202 (286)
287 cd05034 PTKc_Src_like Catalyti 99.9 4.6E-24 1E-28 205.1 5.8 172 2-179 28-207 (261)
288 cd05579 STKc_MAST_like Catalyt 99.9 4.3E-24 9.4E-29 205.1 5.4 175 2-179 16-203 (265)
289 cd05047 PTKc_Tie Catalytic dom 99.9 2.5E-23 5.5E-28 201.4 10.8 168 6-179 24-214 (270)
290 cd06632 STKc_MEKK1_plant Catal 99.9 3.8E-23 8.2E-28 198.0 11.9 173 2-179 23-204 (258)
291 cd05039 PTKc_Csk_like Catalyti 99.9 3.2E-23 7E-28 198.7 11.3 167 3-179 28-202 (256)
292 cd06659 STKc_PAK6 Catalytic do 99.9 3.2E-24 7E-29 210.9 4.4 170 2-178 44-218 (297)
293 cd06608 STKc_myosinIII_like Ca 99.9 6E-24 1.3E-28 205.4 6.0 171 2-179 29-220 (275)
294 cd05613 STKc_MSK1_N N-terminal 99.9 4E-23 8.7E-28 202.0 11.8 174 2-178 26-209 (290)
295 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 3.3E-23 7.2E-28 198.6 11.0 163 6-179 32-209 (259)
296 cd06627 STKc_Cdc7_like Catalyt 99.9 8.6E-23 1.9E-27 194.9 13.7 174 2-179 23-201 (254)
297 cd07867 STKc_CDC2L6 Catalytic 99.9 2.1E-23 4.5E-28 206.7 9.8 171 3-179 27-218 (317)
298 cd08217 STKc_Nek2 Catalytic do 99.9 4.8E-23 1E-27 197.8 12.0 174 2-179 23-212 (265)
299 cd07837 STKc_CdkB_plant Cataly 99.9 1.1E-23 2.3E-28 206.4 7.5 174 2-179 24-214 (295)
300 cd07835 STKc_CDK1_like Catalyt 99.9 6.3E-24 1.4E-28 206.7 5.9 173 2-179 22-202 (283)
301 cd06648 STKc_PAK_II Catalytic 99.9 1.1E-23 2.3E-28 205.9 7.3 171 2-179 42-217 (285)
302 cd05063 PTKc_EphR_A2 Catalytic 99.9 1.1E-23 2.4E-28 203.4 7.0 171 5-178 34-212 (268)
303 cd05103 PTKc_VEGFR2 Catalytic 99.9 7.8E-24 1.7E-28 212.5 6.2 174 3-179 36-284 (343)
304 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 1.1E-23 2.5E-28 202.5 7.0 171 2-179 28-206 (260)
305 KOG0983|consensus 99.9 5E-24 1.1E-28 195.3 4.1 211 2-220 115-352 (391)
306 cd05056 PTKc_FAK Catalytic dom 99.9 7.7E-23 1.7E-27 197.8 12.5 170 4-179 34-211 (270)
307 cd06637 STKc_TNIK Catalytic do 99.9 1.3E-23 2.8E-28 203.2 7.1 170 2-178 29-217 (272)
308 cd05058 PTKc_Met_Ron Catalytic 99.9 6.3E-23 1.4E-27 197.3 11.7 173 3-178 22-204 (262)
309 cd06642 STKc_STK25-YSK1 Cataly 99.9 2.5E-23 5.5E-28 202.1 9.0 172 2-179 27-203 (277)
310 cd06657 STKc_PAK4 Catalytic do 99.9 1.2E-23 2.6E-28 206.4 6.7 171 2-179 43-218 (292)
311 KOG0608|consensus 99.9 9.5E-24 2.1E-28 212.1 6.0 176 2-180 652-874 (1034)
312 cd07843 STKc_CDC2L1 Catalytic 99.9 5.4E-23 1.2E-27 201.4 11.2 172 2-178 28-208 (293)
313 cd05111 PTK_HER3 Pseudokinase 99.9 2E-23 4.2E-28 203.3 8.0 170 6-179 38-214 (279)
314 cd07844 STKc_PCTAIRE_like Cata 99.9 3E-23 6.5E-28 202.9 9.3 172 2-179 28-206 (291)
315 PHA03209 serine/threonine kina 99.9 1.3E-23 2.9E-28 212.0 6.9 158 2-173 89-250 (357)
316 KOG1035|consensus 99.9 2.9E-24 6.3E-29 230.1 2.1 172 3-179 503-817 (1351)
317 cd05071 PTKc_Src Catalytic dom 99.9 7.9E-23 1.7E-27 197.1 11.8 169 3-178 29-205 (262)
318 cd06612 STKc_MST1_2 Catalytic 99.9 5E-23 1.1E-27 197.0 10.4 169 3-179 27-201 (256)
319 cd05122 PKc_STE Catalytic doma 99.9 2.1E-23 4.7E-28 198.3 7.8 170 2-179 23-199 (253)
320 cd05082 PTKc_Csk Catalytic dom 99.9 1.9E-23 4E-28 200.5 7.4 165 3-178 28-201 (256)
321 cd06639 STKc_myosinIIIB Cataly 99.9 1.5E-23 3.1E-28 205.3 6.7 171 2-179 45-235 (291)
322 cd07833 STKc_CDKL Catalytic do 99.9 2.7E-23 5.9E-28 202.6 8.6 174 2-178 24-203 (288)
323 PRK04282 exosome complex RNA-b 99.9 1.4E-21 3.1E-26 188.8 20.4 208 114-338 32-269 (271)
324 KOG1151|consensus 99.9 1.6E-22 3.4E-27 196.1 13.6 175 3-180 487-687 (775)
325 cd06607 STKc_TAO Catalytic dom 99.9 1E-22 2.2E-27 201.1 12.5 169 2-179 38-216 (307)
326 cd08530 STKc_CNK2-like Catalyt 99.9 3.8E-23 8.1E-28 197.8 9.0 172 2-179 23-203 (256)
327 cd05057 PTKc_EGFR_like Catalyt 99.9 1.1E-22 2.5E-27 197.7 12.4 171 5-179 37-214 (279)
328 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.4E-23 5.1E-28 200.3 7.5 171 2-179 28-206 (260)
329 cd05043 PTK_Ryk Pseudokinase d 99.9 2.7E-23 5.9E-28 202.1 8.0 174 3-179 34-222 (280)
330 PTZ00284 protein kinase; Provi 99.9 3.2E-23 6.9E-28 216.7 8.9 168 2-179 152-347 (467)
331 cd07850 STKc_JNK Catalytic dom 99.9 5E-23 1.1E-27 207.4 9.8 170 2-179 39-219 (353)
332 cd05069 PTKc_Yes Catalytic dom 99.9 2.7E-23 5.8E-28 200.0 7.5 170 3-179 29-206 (260)
333 cd06617 PKc_MKK3_6 Catalytic d 99.9 2.5E-23 5.5E-28 202.4 7.3 170 2-178 24-208 (283)
334 cd05123 STKc_AGC Catalytic dom 99.9 1.5E-23 3.2E-28 200.0 5.5 174 2-179 16-195 (250)
335 cd06647 STKc_PAK_I Catalytic d 99.9 8.7E-23 1.9E-27 200.3 11.0 172 2-180 42-218 (293)
336 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 7.2E-23 1.6E-27 199.5 10.2 168 2-173 31-205 (284)
337 cd06638 STKc_myosinIIIA Cataly 99.9 2.8E-23 6.1E-28 202.5 6.6 171 2-179 41-231 (286)
338 cd05112 PTKc_Itk Catalytic dom 99.9 1.8E-22 4E-27 193.4 12.2 171 3-179 27-204 (256)
339 cd05083 PTKc_Chk Catalytic dom 99.9 4E-23 8.6E-28 198.0 7.5 165 3-179 28-200 (254)
340 cd07860 STKc_CDK2_3 Catalytic 99.9 6.1E-23 1.3E-27 199.9 8.8 172 2-178 23-202 (284)
341 cd07836 STKc_Pho85 Catalytic d 99.9 1.1E-22 2.3E-27 198.1 10.4 172 2-179 23-203 (284)
342 cd07845 STKc_CDK10 Catalytic d 99.9 1.2E-22 2.6E-27 200.7 10.9 172 2-178 30-210 (309)
343 cd05581 STKc_PDK1 Catalytic do 99.9 7E-23 1.5E-27 198.6 8.9 176 2-179 24-224 (280)
344 KOG1094|consensus 99.9 1.8E-23 3.9E-28 208.7 4.7 173 4-179 562-743 (807)
345 cd07870 STKc_PFTAIRE2 Catalyti 99.9 8.1E-23 1.7E-27 200.0 9.2 172 2-179 28-206 (291)
346 KOG0695|consensus 99.9 1.4E-23 3.1E-28 197.0 3.4 175 2-181 273-455 (593)
347 cd07842 STKc_CDK8_like Catalyt 99.9 7.7E-23 1.7E-27 202.3 8.9 176 3-180 26-219 (316)
348 cd06641 STKc_MST3 Catalytic do 99.9 1.7E-22 3.6E-27 196.4 11.0 172 2-179 27-203 (277)
349 KOG1006|consensus 99.9 2.6E-23 5.7E-28 190.0 4.9 170 1-178 86-270 (361)
350 cd06636 STKc_MAP4K4_6 Catalyti 99.9 4E-23 8.8E-28 201.1 6.1 171 2-179 39-228 (282)
351 cd07864 STKc_CDK12 Catalytic d 99.9 4E-23 8.7E-28 203.1 6.1 173 2-178 30-219 (302)
352 cd06635 STKc_TAO1 Catalytic do 99.9 3.1E-22 6.8E-27 198.6 12.5 169 2-179 48-226 (317)
353 KOG4257|consensus 99.9 9.5E-23 2E-27 204.8 8.6 172 5-181 419-597 (974)
354 cd05583 STKc_MSK_N N-terminal 99.9 3.9E-23 8.5E-28 201.9 5.7 174 3-179 27-210 (288)
355 cd05073 PTKc_Hck Catalytic dom 99.9 4.3E-22 9.4E-27 191.6 12.9 170 3-179 29-206 (260)
356 cd07865 STKc_CDK9 Catalytic do 99.9 1.3E-22 2.8E-27 200.0 9.3 174 2-178 35-225 (310)
357 cd05110 PTKc_HER4 Catalytic do 99.9 1.3E-22 2.9E-27 199.9 9.3 170 6-179 38-214 (303)
358 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 3.1E-22 6.6E-27 195.6 11.7 172 2-180 24-206 (287)
359 KOG0665|consensus 99.9 3.1E-23 6.6E-28 194.2 4.2 171 3-181 40-221 (369)
360 cd07858 STKc_TEY_MAPK_plant Ca 99.9 8.4E-23 1.8E-27 204.5 7.7 173 2-179 28-211 (337)
361 PTZ00024 cyclin-dependent prot 99.9 7.8E-23 1.7E-27 204.4 7.3 175 2-179 32-236 (335)
362 PHA03210 serine/threonine kina 99.9 3.8E-23 8.2E-28 217.5 5.2 148 21-172 206-361 (501)
363 cd08528 STKc_Nek10 Catalytic d 99.9 1.1E-22 2.4E-27 196.4 7.8 172 3-179 25-215 (269)
364 cd07831 STKc_MOK Catalytic dom 99.9 2.1E-22 4.5E-27 195.8 9.2 170 2-179 22-201 (282)
365 cd07855 STKc_ERK5 Catalytic do 99.9 9.2E-23 2E-27 203.9 6.9 175 2-179 28-214 (334)
366 KOG0196|consensus 99.9 5.3E-22 1.1E-26 204.2 12.4 171 4-178 657-836 (996)
367 cd07840 STKc_CDK9_like Catalyt 99.9 1.1E-22 2.5E-27 197.8 6.9 174 2-179 22-204 (287)
368 cd07852 STKc_MAPK15 Catalytic 99.9 2.5E-22 5.4E-27 201.0 9.3 172 2-178 30-214 (337)
369 cd06633 STKc_TAO3 Catalytic do 99.9 2.1E-22 4.6E-27 199.5 8.6 169 2-179 44-222 (313)
370 KOG1027|consensus 99.9 2.3E-22 4.9E-27 208.6 9.0 171 3-180 532-718 (903)
371 cd05118 STKc_CMGC Catalytic do 99.9 2.2E-22 4.8E-27 195.5 8.5 173 2-179 22-201 (283)
372 KOG0587|consensus 99.9 2.6E-21 5.6E-26 201.7 16.7 171 2-180 42-231 (953)
373 cd07834 STKc_MAPK Catalytic do 99.9 1.6E-22 3.4E-27 201.6 6.9 175 2-179 23-209 (330)
374 KOG0603|consensus 99.9 8.7E-23 1.9E-27 207.2 4.6 165 2-181 345-517 (612)
375 cd06634 STKc_TAO2 Catalytic do 99.9 1.1E-21 2.4E-26 193.8 12.1 169 2-179 38-216 (308)
376 KOG2052|consensus 99.9 2.4E-22 5.3E-27 195.4 7.0 162 3-172 233-419 (513)
377 cd07854 STKc_MAPK4_6 Catalytic 99.9 2E-22 4.3E-27 202.2 6.6 173 2-179 28-221 (342)
378 cd07877 STKc_p38alpha_MAPK14 C 99.9 7.4E-22 1.6E-26 198.4 10.7 169 2-179 40-220 (345)
379 KOG0664|consensus 99.9 2.9E-24 6.3E-29 196.7 -6.2 188 2-199 76-272 (449)
380 cd07880 STKc_p38gamma_MAPK12 C 99.9 4.1E-22 9E-27 200.0 8.2 169 2-179 38-218 (343)
381 KOG3653|consensus 99.9 2.1E-22 4.6E-27 197.2 5.8 160 3-172 232-417 (534)
382 KOG0696|consensus 99.9 2.5E-23 5.4E-28 200.1 -0.7 173 2-179 372-552 (683)
383 cd07838 STKc_CDK4_6_like Catal 99.9 1.9E-21 4.2E-26 189.3 12.6 170 3-178 23-207 (287)
384 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 6E-22 1.3E-26 197.6 9.0 169 2-179 33-208 (328)
385 cd07849 STKc_ERK1_2_like Catal 99.9 4.8E-22 1E-26 198.9 8.0 173 2-179 28-212 (336)
386 cd07857 STKc_MPK1 Catalytic do 99.9 7.3E-22 1.6E-26 197.3 8.7 173 4-179 27-212 (332)
387 cd07866 STKc_BUR1 Catalytic do 99.9 4.4E-22 9.6E-27 196.2 6.8 175 2-179 31-229 (311)
388 cd06616 PKc_MKK4 Catalytic dom 99.9 1.5E-21 3.2E-26 190.6 10.2 171 2-179 27-212 (288)
389 KOG0669|consensus 99.9 5.7E-23 1.2E-27 186.3 0.1 168 2-172 40-222 (376)
390 KOG0671|consensus 99.9 4.7E-21 1E-25 183.5 13.0 168 2-179 112-311 (415)
391 cd07829 STKc_CDK_like Catalyti 99.9 9.5E-22 2.1E-26 191.0 8.4 171 2-178 22-200 (282)
392 TIGR03591 polynuc_phos polyrib 99.9 2.5E-20 5.5E-25 199.8 19.8 202 117-343 5-219 (684)
393 cd07879 STKc_p38delta_MAPK13 C 99.8 1.4E-21 3E-26 196.1 8.0 168 2-179 38-217 (342)
394 cd08222 STKc_Nek11 Catalytic d 99.8 1.9E-21 4E-26 186.9 7.4 169 5-178 26-206 (260)
395 cd07851 STKc_p38 Catalytic dom 99.8 1.4E-21 3E-26 196.2 6.8 169 2-179 38-218 (343)
396 KOG4278|consensus 99.8 4.6E-22 9.9E-27 199.6 2.7 173 4-182 292-472 (1157)
397 cd07830 STKc_MAK_like Catalyti 99.8 2.9E-21 6.3E-26 187.9 7.9 170 2-179 22-201 (283)
398 cd06618 PKc_MKK7 Catalytic dom 99.8 1.2E-21 2.7E-26 192.2 5.3 171 2-179 38-220 (296)
399 smart00220 S_TKc Serine/Threon 99.8 1.7E-21 3.8E-26 183.7 5.4 172 2-179 12-188 (244)
400 PRK11824 polynucleotide phosph 99.8 1.1E-19 2.3E-24 195.5 19.5 204 117-342 14-227 (693)
401 KOG0670|consensus 99.8 1.1E-20 2.5E-25 186.5 10.8 161 3-172 456-628 (752)
402 KOG0199|consensus 99.8 1.7E-20 3.6E-25 191.0 9.3 171 4-179 138-318 (1039)
403 PLN00113 leucine-rich repeat r 99.8 1.1E-20 2.4E-25 214.7 9.0 159 2-178 713-879 (968)
404 KOG0668|consensus 99.8 8.5E-21 1.8E-25 170.1 5.8 165 2-178 61-234 (338)
405 PHA02882 putative serine/threo 99.8 7.8E-21 1.7E-25 186.5 5.7 150 27-179 72-235 (294)
406 KOG1345|consensus 99.8 1.9E-20 4.2E-25 171.7 7.3 167 2-178 47-226 (378)
407 cd05610 STKc_MASTL Catalytic d 99.8 2.4E-19 5.2E-24 194.7 16.2 161 2-166 27-192 (669)
408 KOG0200|consensus 99.8 1.4E-19 3E-24 194.0 12.7 172 4-179 328-524 (609)
409 smart00221 STYKc Protein kinas 99.8 1.3E-19 2.9E-24 169.3 9.9 172 3-178 23-201 (225)
410 cd00180 PKc Catalytic domain o 99.8 4.5E-19 9.7E-24 162.9 12.6 166 3-172 17-187 (215)
411 KOG1025|consensus 99.8 5.5E-20 1.2E-24 190.1 2.7 197 3-219 724-930 (1177)
412 KOG1167|consensus 99.8 1.6E-18 3.6E-23 168.2 9.9 168 3-178 63-279 (418)
413 PLN00207 polyribonucleotide nu 99.8 1.5E-17 3.2E-22 178.5 17.9 204 119-342 91-302 (891)
414 PLN03225 Serine/threonine-prot 99.8 2.6E-19 5.6E-24 190.1 3.8 167 4-178 161-378 (566)
415 PHA02713 hypothetical protein; 99.8 4.1E-19 9E-24 188.2 4.5 97 342-444 10-110 (557)
416 cd05147 RIO1_euk RIO kinase fa 99.7 6.4E-18 1.4E-22 154.8 9.8 123 2-128 19-166 (190)
417 KOG4441|consensus 99.7 9.4E-19 2E-23 185.0 4.6 97 344-444 23-121 (571)
418 PLN03224 probable serine/threo 99.7 4.4E-18 9.6E-23 176.8 8.4 169 3-174 185-427 (507)
419 PHA02790 Kelch-like protein; P 99.7 1.6E-18 3.6E-23 181.0 5.1 99 350-453 15-128 (480)
420 PLN00181 protein SPA1-RELATED; 99.7 6.7E-19 1.5E-23 195.4 0.2 144 33-178 27-216 (793)
421 PRK09188 serine/threonine prot 99.7 5.7E-17 1.2E-21 161.8 12.9 156 3-171 43-219 (365)
422 KOG0576|consensus 99.7 6E-19 1.3E-23 179.2 -1.4 164 2-172 38-208 (829)
423 cd05145 RIO1_like RIO kinase f 99.7 2.4E-16 5.2E-21 144.6 12.4 125 2-130 19-168 (190)
424 KOG1290|consensus 99.7 1.2E-16 2.7E-21 157.4 8.9 107 2-112 101-222 (590)
425 PRK10359 lipopolysaccharide co 99.7 4.6E-16 1E-20 144.8 10.5 148 3-172 53-215 (232)
426 PF00651 BTB: BTB/POZ domain; 99.6 1.6E-16 3.4E-21 132.4 5.6 94 348-445 1-99 (111)
427 PRK10345 hypothetical protein; 99.6 1.8E-15 3.8E-20 140.2 12.9 112 8-124 28-154 (210)
428 PHA03098 kelch-like protein; P 99.6 8.7E-17 1.9E-21 171.0 4.6 87 352-444 4-92 (534)
429 COG2123 RNase PH-related exori 99.6 3.1E-14 6.8E-19 131.6 20.3 208 114-339 31-271 (272)
430 PF01138 RNase_PH: 3' exoribon 99.6 1.6E-15 3.4E-20 130.7 10.8 130 115-247 1-132 (132)
431 COG0515 SPS1 Serine/threonine 99.6 1.1E-15 2.4E-20 149.3 9.3 173 5-178 23-212 (384)
432 KOG1163|consensus 99.6 1.5E-14 3.2E-19 131.2 13.1 172 2-179 38-223 (341)
433 KOG4158|consensus 99.6 1.7E-15 3.7E-20 146.1 7.3 143 36-181 274-461 (598)
434 KOG1164|consensus 99.6 5.3E-15 1.1E-19 147.1 7.2 171 5-179 45-239 (322)
435 KOG4350|consensus 99.5 3.1E-15 6.7E-20 143.4 4.7 92 344-439 31-127 (620)
436 KOG0590|consensus 99.5 2.5E-15 5.5E-20 159.5 4.4 150 25-178 368-526 (601)
437 KOG1024|consensus 99.5 9.3E-15 2E-19 140.7 6.2 183 7-201 317-514 (563)
438 PRK14879 serine/threonine prot 99.5 1.4E-13 3E-18 128.2 12.5 120 3-128 18-143 (211)
439 smart00090 RIO RIO-like kinase 99.5 6.4E-14 1.4E-18 132.8 10.3 121 2-128 52-197 (237)
440 KOG1165|consensus 99.5 6E-14 1.3E-18 132.7 9.8 170 3-179 52-238 (449)
441 KOG2075|consensus 99.5 9.7E-15 2.1E-19 143.4 3.5 107 339-445 96-205 (521)
442 PRK12274 serine/threonine prot 99.5 2.1E-13 4.5E-18 124.7 11.9 157 3-172 24-200 (218)
443 TIGR03724 arch_bud32 Kae1-asso 99.5 1.9E-13 4.1E-18 126.1 11.3 117 3-128 16-138 (199)
444 smart00225 BTB Broad-Complex, 99.5 2.9E-14 6.2E-19 113.2 4.7 83 359-445 1-85 (90)
445 KOG0195|consensus 99.5 3.7E-15 8E-20 137.2 -0.9 168 3-180 212-392 (448)
446 KOG0603|consensus 99.5 4.2E-15 9.2E-20 151.6 -0.8 169 2-179 20-193 (612)
447 smart00750 KIND kinase non-cat 99.5 3.3E-14 7.2E-19 128.3 4.7 100 63-179 1-106 (176)
448 PRK01723 3-deoxy-D-manno-octul 99.4 1.2E-12 2.7E-17 124.2 11.5 119 4-128 55-191 (239)
449 PRK09605 bifunctional UGMP fam 99.4 9.8E-13 2.1E-17 139.8 12.0 98 22-129 380-477 (535)
450 cd05144 RIO2_C RIO kinase fami 99.3 3.2E-12 6.9E-17 118.0 9.2 118 2-130 37-176 (198)
451 KOG1240|consensus 99.3 8E-14 1.7E-18 149.3 -2.8 237 6-249 48-316 (1431)
452 cd05119 RIO RIO kinase family, 99.3 1.6E-11 3.5E-16 112.0 9.8 122 2-131 19-166 (187)
453 KOG1614|consensus 99.3 3.9E-10 8.5E-15 101.9 17.0 209 115-343 31-274 (291)
454 cd05120 APH_ChoK_like Aminogly 99.3 2.8E-11 6.1E-16 105.3 9.6 112 4-128 21-138 (155)
455 KOG1166|consensus 99.2 7.1E-12 1.5E-16 136.5 2.0 193 3-206 721-928 (974)
456 cd05146 RIO3_euk RIO kinase fa 99.1 2.4E-10 5.1E-15 104.3 10.5 95 27-128 75-173 (197)
457 KOG1023|consensus 99.1 6.7E-12 1.5E-16 128.1 -1.3 146 32-179 1-160 (484)
458 KOG1067|consensus 99.1 5.3E-10 1.2E-14 111.8 12.0 206 114-341 366-587 (760)
459 COG1185 Pnp Polyribonucleotide 99.1 5.7E-10 1.2E-14 115.4 10.2 224 102-342 305-543 (692)
460 KOG0590|consensus 99.0 3.5E-11 7.7E-16 128.1 0.6 172 4-178 46-231 (601)
461 PF14531 Kinase-like: Kinase-l 99.0 6.6E-11 1.4E-15 113.7 2.1 171 2-180 35-253 (288)
462 KOG1033|consensus 99.0 8.1E-12 1.8E-16 125.5 -4.4 117 52-173 330-456 (516)
463 KOG1243|consensus 99.0 7.1E-10 1.5E-14 114.7 8.5 160 2-173 35-197 (690)
464 cd05151 ChoK Choline Kinase (C 98.9 2E-09 4.3E-14 96.4 7.7 110 3-127 20-135 (170)
465 PRK15123 lipopolysaccharide co 98.9 1.4E-08 3E-13 97.7 13.7 124 3-127 44-193 (268)
466 KOG0606|consensus 98.9 5.3E-11 1.1E-15 127.9 -3.8 107 63-180 136-261 (1205)
467 PF03725 RNase_PH_C: 3' exorib 98.9 1.3E-08 2.7E-13 76.7 9.9 66 250-325 1-68 (68)
468 COG3642 Mn2+-dependent serine/ 98.9 1.5E-08 3.2E-13 89.8 11.1 96 23-127 44-139 (204)
469 TIGR01982 UbiB 2-polyprenylphe 98.9 9.4E-09 2E-13 106.1 10.3 100 25-130 200-308 (437)
470 PRK04750 ubiB putative ubiquin 98.9 2.1E-09 4.6E-14 112.5 5.3 99 25-130 203-315 (537)
471 TIGR02696 pppGpp_PNP guanosine 98.8 1E-07 2.2E-12 101.4 17.5 200 119-336 19-242 (719)
472 KOG1613|consensus 98.7 1.7E-07 3.7E-12 84.9 12.6 203 114-332 44-295 (298)
473 PF01163 RIO1: RIO1 family; I 98.7 3.5E-08 7.6E-13 89.7 8.3 120 2-129 8-156 (188)
474 KOG1612|consensus 98.7 1.9E-06 4.2E-11 78.8 18.8 207 114-340 29-276 (288)
475 PF06293 Kdo: Lipopolysacchari 98.7 1.5E-07 3.3E-12 87.3 12.0 105 23-127 56-169 (206)
476 KOG3087|consensus 98.7 1.7E-07 3.6E-12 82.9 10.7 125 3-127 29-164 (229)
477 KOG4591|consensus 98.7 8.8E-09 1.9E-13 90.5 2.7 91 345-438 54-147 (280)
478 KOG0601|consensus 98.6 2.3E-08 4.9E-13 102.7 2.8 169 2-172 141-320 (524)
479 cd05154 ACAD10_11_like Acyl-Co 98.5 2.4E-07 5.3E-12 86.4 8.6 122 4-127 22-205 (223)
480 COG1185 Pnp Polyribonucleotide 98.5 4.1E-06 9E-11 87.3 15.3 202 117-338 14-222 (692)
481 KOG0601|consensus 98.4 3.1E-07 6.7E-12 94.4 5.1 166 2-172 289-459 (524)
482 KOG0783|consensus 98.4 8.1E-08 1.8E-12 100.3 0.3 88 355-445 708-803 (1267)
483 PF06176 WaaY: Lipopolysacchar 98.3 3.6E-06 7.8E-11 77.6 10.3 114 3-126 53-181 (229)
484 KOG1266|consensus 98.3 1.9E-07 4.2E-12 89.1 1.8 140 30-172 119-275 (458)
485 KOG3741|consensus 98.3 2.7E-06 5.7E-11 86.2 9.1 116 2-119 299-435 (655)
486 KOG0783|consensus 98.3 4.7E-07 1E-11 94.8 3.8 65 355-423 556-634 (1267)
487 PRK09902 hypothetical protein; 98.2 2.3E-05 5E-10 72.0 12.0 123 4-126 41-177 (216)
488 COG0478 RIO-like serine/threon 98.0 3.3E-05 7.1E-10 72.9 8.8 92 23-125 154-248 (304)
489 KOG4682|consensus 97.9 6.5E-06 1.4E-10 80.1 3.8 91 349-444 61-157 (488)
490 KOG1067|consensus 97.9 6.7E-05 1.4E-09 76.1 10.0 197 117-332 56-259 (760)
491 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00049 1.1E-08 63.2 12.5 115 3-122 22-165 (199)
492 KOG0606|consensus 97.7 2.7E-06 5.8E-11 92.5 -2.9 152 26-179 852-1037(1205)
493 KOG2838|consensus 97.7 3.1E-05 6.6E-10 71.7 4.3 79 341-423 114-196 (401)
494 COG0661 AarF Predicted unusual 97.7 0.00015 3.3E-09 75.9 9.8 101 25-131 208-317 (517)
495 COG1718 RIO1 Serine/threonine 97.7 0.00022 4.8E-09 66.6 9.1 120 2-128 70-215 (268)
496 TIGR02172 Fb_sc_TIGR02172 Fibr 97.7 0.00054 1.2E-08 64.5 11.7 57 4-64 22-80 (226)
497 cd05150 APH Aminoglycoside 3'- 97.5 0.00081 1.7E-08 63.9 10.7 60 4-68 22-82 (244)
498 cd05610 STKc_MASTL Catalytic d 97.4 7E-06 1.5E-10 89.8 -5.4 78 100-179 499-582 (669)
499 PLN02876 acyl-CoA dehydrogenas 97.2 0.0022 4.7E-08 72.0 11.9 60 5-65 66-131 (822)
500 PF01636 APH: Phosphotransfera 97.2 0.0035 7.6E-08 58.5 11.1 59 5-67 21-84 (239)
No 1
>KOG1068|consensus
Probab=100.00 E-value=1.7e-37 Score=280.60 Aligned_cols=217 Identities=35% Similarity=0.519 Sum_probs=202.2
Q ss_pred cCcceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccccccC-CCCCcch
Q psy6508 113 NNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTG-WLRDSEE 191 (477)
Q Consensus 113 ~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~-~~~~~~~ 191 (477)
++++|.+....|+...++||+|+++|+|++.|.+|||.|....... . -+.+.+.+++...+|++..++. +.+++++
T Consensus 20 ~~elR~i~~~~g~~~~a~GSay~E~GnTKVl~aV~GPre~~~~~~~--~-~~~a~lnc~~~~a~Fst~~r~~~~~~~rr~ 96 (245)
T KOG1068|consen 20 PNELRRIYARIGVLTQADGSAYMEQGNTKVLCAVYGPREIRGKSAR--R-PDKAVLNCEVSSAQFSTGDRKKRPKGDRRE 96 (245)
T ss_pred hhHhhhhhhhcCccccCCccchhhcCCeEEEEEEeCCccccccccc--c-cccceEEEEEeeeccccchhccCCCccHHH
Confidence 4688999999999999999999999999999999999998765521 2 4668999999999999988884 6889999
Q ss_pred HHHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEEEEEEEeeCCeEEeCCChH
Q psy6508 192 KELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEE 271 (477)
Q Consensus 192 ~~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~~~~~Dp~~~ 271 (477)
.+++..++++++|+|+++.|||++|||+++|||+||+.+++++||+++||+||||||+|++++||+++.++.+++||+..
T Consensus 97 ~e~s~~L~~afe~~I~~~lyPrsqIDI~v~VleddG~~laa~inaatlAL~daGI~m~D~i~~~t~~l~~~~~l~Dl~~~ 176 (245)
T KOG1068|consen 97 KELSLMLQQAFEPVILLELYPRSQIDIYVQVLEDDGSNLAAAINAATLALADAGIPMYDLITACTAGLADGTPLLDLTSL 176 (245)
T ss_pred HHHHHHHHHHHHHHHHhhhCccccceEEEEEEECCCccHHHHHHHHHHHHHHcCCChhhhhhhceeeecCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEeeecHHHHHHHHHHHHhcccchhhHHHHhHhhhccc
Q psy6508 272 EVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVT 343 (477)
Q Consensus 272 E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~~~~~~~~~~l~~~~~~~~~i~~~~i~~~l~~~~~ 343 (477)
||.. ..+.+|+++++..++|+.+|++++++.+.|+.+|+.++++|+.+++. ++..++++..
T Consensus 177 eesa----------~~~~ltVa~l~~~~~i~~l~~~~~~~~d~l~~vl~~a~~~c~~v~~~-l~~~l~~~l~ 237 (245)
T KOG1068|consen 177 EESA----------RAPGLTVAALPNREEIALLQLDERLHCDHLETVLELAIAGCKRVYER-LRLVLREHLK 237 (245)
T ss_pred hhhc----------cCCceEEEEecCcceEEEEEecCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 9995 36689999999999999999999999999999999999999999999 9998887754
No 2
>KOG0615|consensus
Probab=100.00 E-value=8.9e-36 Score=286.12 Aligned_cols=176 Identities=28% Similarity=0.418 Sum_probs=153.6
Q ss_pred CCCcEEEEEEcccCCCChh-----HHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSEN-----RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~-----~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
++|+.||||+++++..... ......+|+++|++|+|||||+++++|+.....||||||++||.|.+.+-.++.+.
T Consensus 195 ~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ 274 (475)
T KOG0615|consen 195 KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLR 274 (475)
T ss_pred ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccc
Confidence 6899999999998865431 22346799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc--CcceeecccccceecccCCcccccCCeEEEeccccccccCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN--NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPS 154 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~--~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~ 154 (477)
+...+.+++|++.|++|||++||+||||||+|||+.. ..+-+.+.|||+++..... ..-.|..||+.|.|||++.
T Consensus 275 ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~---sfm~TlCGTpsYvAPEVl~ 351 (475)
T KOG0615|consen 275 EDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG---SFMKTLCGTPSYVAPEVLA 351 (475)
T ss_pred cchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccc---eehhhhcCCccccChhhee
Confidence 9999999999999999999999999999999999965 3566777899998654321 2336889999999999998
Q ss_pred CC------CcccccCcceEEEEEE--eeecccccc
Q psy6508 155 SK------TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 155 ~~------~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
.. .++|+ ||+||++|-+ |++||++..
T Consensus 352 ~kg~~~~~~kVDi-WSlGcvLfvcLsG~pPFS~~~ 385 (475)
T KOG0615|consen 352 SKGVEYYPSKVDI-WSLGCVLFVCLSGYPPFSEEY 385 (475)
T ss_pred cCCeecccchhee-eeccceEEEEeccCCCccccc
Confidence 76 47899 9999999988 999999643
No 3
>KOG0595|consensus
Probab=100.00 E-value=1.1e-35 Score=285.72 Aligned_cols=174 Identities=36% Similarity=0.596 Sum_probs=157.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
+++..||||.+.+...+.+..+.+..|+.+|+.++|||||+++++++..+.+|+|||||+||+|.+|+++++.+++..++
T Consensus 33 ~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r 112 (429)
T KOG0595|consen 33 KSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATAR 112 (429)
T ss_pred cCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHH
Confidence 57899999999999888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccC---c--ceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNN---T--LKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~---~--~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
.++.||+.||++||+++|+||||||+||||+.+ . ..+.+.|||+++......+ -.|-.|++.|||||+....
T Consensus 113 ~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~---a~tlcGSplYMAPEV~~~~ 189 (429)
T KOG0595|consen 113 HFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM---AETLCGSPLYMAPEVIMSQ 189 (429)
T ss_pred HHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhH---HHHhhCCccccCHHHHHhc
Confidence 999999999999999999999999999999642 2 6777889999987775443 3467889999999998544
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||.|+++|++ +.+||..
T Consensus 190 ~YdAKADL-WSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 190 QYDAKADL-WSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred cccchhhH-HHHHHHHHHHHhCCCCccc
Confidence 78999 9999999999 7788873
No 4
>TIGR02065 ECX1 archaeal exosome-like complex exonuclease 1. This family contains the archaeal protein orthologous to the eukaryotic exosome protein Rrp41. It is somewhat more distantly related to the bacterial protein ribonuclease PH. An exosome-like complex has been demonstrated experimentally for the Archaea in Sulfolobus solfataricus, so members of this family are designated exosome complex exonuclease 1, after usage in SwissProt.
Probab=100.00 E-value=6.1e-33 Score=261.32 Aligned_cols=223 Identities=27% Similarity=0.463 Sum_probs=199.6
Q ss_pred CCCceeec---cCcceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeecccccc
Q psy6508 105 KPQNILIK---NNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI 181 (477)
Q Consensus 105 kp~NIll~---~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~ 181 (477)
-++++-.| .+++|.+.+.+|....++||++++.|+|++.+.+++|.|..... .+. -..|.+.+++.+.||++..
T Consensus 4 ~~~~~R~DGR~~~e~R~~~~~~g~~~~a~GSa~~~~G~T~Vl~~V~gp~e~~~~~--~~~-~~~~~l~v~~~~~~~a~~~ 80 (230)
T TIGR02065 4 LEDGVRLDGRKPDELRPIKIEAGVLKNADGSAYVEFGGTKIIAAVYGPREMHPRH--LQL-PDRAVLRVRYHMAPFSTDE 80 (230)
T ss_pred cCCCcCCCCCCcccccCeEEEECCCCCCCeEEEEEECCcEEEEEEeCCCcccccc--ccC-CCceEEEEEEEeCCcccCC
Confidence 34555554 36899999999999999999999999999999999998865442 011 3468888999999999866
Q ss_pred ccCCCCCcchHHHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEEEEEEEeeC
Q psy6508 182 RTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRG 261 (477)
Q Consensus 182 r~~~~~~~~~~~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~a~s~~~~~ 261 (477)
+....++..+.++++.+++++++.++++.||+..+++++++|++||+.+++++||+++||.||||||+++++|+++++.+
T Consensus 81 ~~~~~~~~~~~~~s~~l~~~l~~~i~~~~~p~~~i~i~v~vl~~DG~~~~aai~aa~lAL~dagIp~~~~v~avtv~~~~ 160 (230)
T TIGR02065 81 RKRPGPSRREIEISKVIREALEPAILLEQFPRTAIDVFIEVLQADAGTRCAGLTAASLALADAGIPMRDLVVGVAVGKVD 160 (230)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHhChhhcCCeEEEEEEEEEEcCCCHHHHHHHHHHHHHHHcCCccccceeeEEEEEEC
Confidence 65555677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEeeecHHHHHHHHHHHHhcccchhhHHHHhHhhhc
Q psy6508 262 GLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDH 341 (477)
Q Consensus 262 ~~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~~~~~~~~~~l~~~~~~~~~i~~~~i~~~l~~~ 341 (477)
+.+++||+.+|+.. +.+.++++++++.++|+.+++.|.++.+++.++++.|.++|+.+++. |++.++++
T Consensus 161 ~~~v~Dpt~~Ee~~----------~~~~l~va~~~~~~~i~~i~~~g~~~~e~~~~~l~~a~~~~~~l~~~-~~~~l~~~ 229 (230)
T TIGR02065 161 GVVVLDLNEEEDMY----------GEADMPVAMMPKLGEITLLQLDGDMTPDEFRQALDLAVKGIKIIYQI-QREALKNK 229 (230)
T ss_pred CeEEECCCHHHhhc----------CCCceEEEEeCCCCCEEEEEEecCcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHhh
Confidence 99999999999984 47889999999899999999999999999999999999999999999 99998875
No 5
>KOG0575|consensus
Probab=100.00 E-value=2.6e-34 Score=288.91 Aligned_cols=174 Identities=26% Similarity=0.444 Sum_probs=156.9
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||+|++.+..+ .+...+++.+|+++.++|+|||||+++++|++.+++|||+|+|+.++|..++++.+.+++.++
T Consensus 41 ~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEa 120 (592)
T KOG0575|consen 41 DTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEA 120 (592)
T ss_pred CCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHH
Confidence 5899999999988655 456678899999999999999999999999999999999999999999999998889999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+.+++||+.||.|||+++|+|||||..|+|++++ ++|+. |||++....... +...|..||+.|.|||++...
T Consensus 121 ry~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIg--DFGLAt~le~~~--Erk~TlCGTPNYIAPEVl~k~gHs 196 (592)
T KOG0575|consen 121 RYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIG--DFGLATQLEYDG--ERKKTLCGTPNYIAPEVLNKSGHS 196 (592)
T ss_pred HHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEec--ccceeeeecCcc--cccceecCCCcccChhHhccCCCC
Confidence 9999999999999999999999999999999887 66655 999998766432 445688999999999999876
Q ss_pred CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
..+|+ ||+||++|.+ |.+||.+.
T Consensus 197 fEvDi-WSlGcvmYtLL~G~PPFetk 221 (592)
T KOG0575|consen 197 FEVDI-WSLGCVMYTLLVGRPPFETK 221 (592)
T ss_pred Cchhh-hhhhhHHHhhhhCCCCcccc
Confidence 88999 9999999999 77999853
No 6
>KOG0581|consensus
Probab=100.00 E-value=1.5e-34 Score=275.70 Aligned_cols=170 Identities=24% Similarity=0.336 Sum_probs=153.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC-eEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-YVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
++++.+|+|++. ....+..++++.+|+++++..+|||||++|++|..++ .++|+||||+||+|..+++..+++++...
T Consensus 102 ~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L 180 (364)
T KOG0581|consen 102 PTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVL 180 (364)
T ss_pred CCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHH
Confidence 589999999994 3445667788999999999999999999999999998 59999999999999999998889999999
Q ss_pred HHHHHHHHHHHHHHHh-CCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 81 QQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
-+++.++++||.|||+ ++|+||||||+|||++. +++|+. |||++.....| .-+|.+||..||+||.+.+.
T Consensus 181 ~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKic--DFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Y 254 (364)
T KOG0581|consen 181 GKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKIC--DFGVSGILVNS----IANTFVGTSAYMSPERISGESY 254 (364)
T ss_pred HHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEec--cccccHHhhhh----hcccccccccccChhhhcCCcC
Confidence 9999999999999996 89999999999999986 566665 99999887766 45799999999999999987
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|| ||+|..++|+ |..||..
T Consensus 255 s~~sDI-WSLGLsllE~a~GrfP~~~ 279 (364)
T KOG0581|consen 255 SVKSDI-WSLGLSLLELAIGRFPYPP 279 (364)
T ss_pred Ccccce-ecccHHHHHHhhCCCCCCC
Confidence 77899 9999999999 6667775
No 7
>COG0689 Rph RNase PH [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1e-32 Score=251.47 Aligned_cols=212 Identities=28% Similarity=0.371 Sum_probs=194.5
Q ss_pred cCcceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccccccCCCCCc-ch
Q psy6508 113 NNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDS-EE 191 (477)
Q Consensus 113 ~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~-~~ 191 (477)
.+++|.+.+..|...+++||++++.|+|++.|.+++|.|...... .- -..|.+.+|.++.||++..|.....+. +.
T Consensus 15 ~delR~i~~~~~~~~~a~GS~~~~~G~tkVic~vsGp~e~~p~~l--~~-~~~g~~t~ey~m~p~sT~~R~~~~~~~gR~ 91 (230)
T COG0689 15 PDELRPIKITRGVLKHAEGSSLIEFGNTKVICTVSGPREPVPRFL--RG-TGKGWLTAEYGMLPRSTDERKKREADRGRT 91 (230)
T ss_pred cccccceEEEeccccCCCccEEEEeCCeEEEEEEecCCCCCChhh--cC-CCceEEEEEEecccccccccccccccccch
Confidence 468999999999999999999999999999999999998766541 11 346999999999999986666554444 78
Q ss_pred HHHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEEEEEEEeeCCeEEeCCChH
Q psy6508 192 KELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEE 271 (477)
Q Consensus 192 ~~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~~~~~Dp~~~ 271 (477)
.++++++.+++++++.++.||+..|+|+++|+|+||+++.++||||++||+|||+||+++|+|+|+++.++.+++||+..
T Consensus 92 ~eisrli~~al~~~i~L~~~p~~~I~i~~dVlqaDggTrta~It~A~lAL~DAgipl~~~vaaiSvgi~~~~~~lDl~~~ 171 (230)
T COG0689 92 KEISRLIGRALRAVIDLELLPESTIDIDCDVLQADGGTRTASITGASLALADAGIPLRDLVAAISVGIVDGVIVLDLDYE 171 (230)
T ss_pred hHHHHHHHHHHHHHhhhhhcCccEEEEEEEEEECCCCeeeehhhHHHHHHHHcCCchhhheeEeEEEEECCceEecCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCCCceEEEEEccCCC--cEEEEEEEeeecHHHHHHHHHHHHhcccchhhHHHHhHh
Q psy6508 272 EVAYCQSLSSSEDDDSGVITLSYMSVIQ--QVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLV 338 (477)
Q Consensus 272 E~~~~~~~~~~~~~~~~~~~~a~~~~~~--~i~~~~~~g~~~~~~~~~~l~~~~~~~~~i~~~~i~~~l 338 (477)
|+.. +.+.++++++++.+ +|.+++.+|.|+.++|..+|++|+++|+.++.. ++++|
T Consensus 172 Eds~----------~~~d~~v~~~~~~~~~ei~~~~~~~~~~~del~~lL~la~~g~~~~~~~-~~~al 229 (230)
T COG0689 172 EDSA----------AEADMNVVMTGNGGLVEIQGLAEDGPFTEDELLELLDLAIKGCNELREL-QREAL 229 (230)
T ss_pred hhcc----------cccCceEEEEecCCeEEEEEEeccCCcCHHHHHHHHHHHHHHHHHHHHH-HHHHh
Confidence 9984 58899999999999 999999999999999999999999999999999 88776
No 8
>PRK03983 exosome complex exonuclease Rrp41; Provisional
Probab=100.00 E-value=8.8e-32 Score=255.74 Aligned_cols=216 Identities=29% Similarity=0.459 Sum_probs=196.1
Q ss_pred CcceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccccccCCCCCcchHH
Q psy6508 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKE 193 (477)
Q Consensus 114 ~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~ 193 (477)
+++|.+.+.+|....++||++++.|+|++.+.+++|.|..... ... ..-|.+.+++.+.||++..+....++..+.+
T Consensus 22 ~~~R~i~i~~G~l~~a~GSa~v~~G~T~Vl~~V~gp~e~~~~~--~~~-~~~~~l~v~~~~~p~~~~~~~~~~~~~~~~~ 98 (244)
T PRK03983 22 DELRPIKIEVGVLKNADGSAYLEWGNNKIIAAVYGPREMHPRH--LQL-PDRAVLRVRYNMAPFSVDERKRPGPDRRSIE 98 (244)
T ss_pred CcccceEEEeCCCCCCCeEEEEEECCeEEEEEEecCCcccccc--ccC-CCcEEEEEEEEcCCCccccccCCCCChhHHH
Confidence 5899999999999999999999999999999999988865432 011 4568888889999999866555556777889
Q ss_pred HHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEEEEEEEeeCCeEEeCCChHHH
Q psy6508 194 LGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEV 273 (477)
Q Consensus 194 l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~~~~~Dp~~~E~ 273 (477)
+++.+++++++.++++.||++.|++++++|++||+.+++++||+++||+||||||+++++++++++.++.+++||+..|+
T Consensus 99 ~s~~l~~~l~~~i~~~~~p~~~I~I~i~VL~~DG~~~~aai~Aa~lAL~dagIp~~~~v~avtv~~~~~~~i~DPt~~Ee 178 (244)
T PRK03983 99 ISKVIREALEPAIMLELFPRTVIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAGCAVGKVDGVIVLDLNKEED 178 (244)
T ss_pred HHHHHHHHHHHhccHHhCCCeEEEEEEEEEECCCCHHHHHHHHHHHHHHhcCCccccceeEEEEEEECCEEEECCCHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEeeecHHHHHHHHHHHHhcccchhhHHHHhHhhhccc
Q psy6508 274 AYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVT 343 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~~~~~~~~~~l~~~~~~~~~i~~~~i~~~l~~~~~ 343 (477)
.. ..+.+++|++++.++|+.+++.|.++.+++.++++.|.++|+.+.+. |++.+.++..
T Consensus 179 ~~----------~~~~l~va~~~~~~~I~~l~~~G~~~~~~~~~~i~~A~~~~~~i~~~-i~~~l~~~~~ 237 (244)
T PRK03983 179 NY----------GEADMPVAIMPRLGEITLLQLDGNLTREEFLEALELAKKGIKRIYQL-QREALKSKYG 237 (244)
T ss_pred cc----------CCceEEEEEECCCCCEEEEEEecCcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 84 47899999999899999999999999999999999999999999999 9999987654
No 9
>KOG0598|consensus
Probab=100.00 E-value=2e-33 Score=267.86 Aligned_cols=177 Identities=24% Similarity=0.377 Sum_probs=154.9
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
++++.||+|++++..+.. ...+...+|..+|.+++||+||+++-.|++.+.+|+|+||+.||.|...|++++.+++..+
T Consensus 48 dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~a 127 (357)
T KOG0598|consen 48 DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRA 127 (357)
T ss_pred ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHH
Confidence 689999999999987754 3567789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
+.++.+|+.||.|||++||+||||||+|||++.++ .+.+.|||++...-... ....|..||+.|+|||++.+. .
T Consensus 128 rfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G-Hi~LtDFgL~k~~~~~~--~~t~tfcGT~eYmAPEil~~~gy~~ 204 (357)
T KOG0598|consen 128 RFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG-HIKLTDFGLCKEDLKDG--DATRTFCGTPEYMAPEILLGKGYDK 204 (357)
T ss_pred HHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC-cEEEeccccchhcccCC--CccccccCCccccChHHHhcCCCCc
Confidence 99999999999999999999999999999998754 33445999987422211 123568999999999999887 7
Q ss_pred cccccCcceEEEEEE--eeeccccccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFASQIR 182 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~~~r 182 (477)
++|+ ||+|+++||| +.+||.+..+
T Consensus 205 ~vDW-WsLGillYeML~G~pPF~~~~~ 230 (357)
T KOG0598|consen 205 AVDW-WSLGILLYEMLTGKPPFYAEDV 230 (357)
T ss_pred ccch-HhHHHHHHHHhhCCCCCcCccH
Confidence 8999 9999999999 7799987553
No 10
>KOG0616|consensus
Probab=99.97 E-value=1.8e-32 Score=253.37 Aligned_cols=171 Identities=28% Similarity=0.513 Sum_probs=154.7
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|..||+|++++...- .++.+...+|..+|+.+.||+++++++.+.+.+.+||||||.+||.|..++++.+++++..+
T Consensus 67 ~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~a 146 (355)
T KOG0616|consen 67 HSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHA 146 (355)
T ss_pred cCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhH
Confidence 57899999999887653 35567788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+.++.||+.||+|||+++|++|||||+|||+|.+ -++++ |||.+....|..+ |-.||+-|.|||....+
T Consensus 147 rFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKit--DFGFAK~v~~rT~-----TlCGTPeYLAPEii~sk~yn 219 (355)
T KOG0616|consen 147 RFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKIT--DFGFAKRVSGRTW-----TLCGTPEYLAPEIIQSKGYN 219 (355)
T ss_pred HHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEE--eccceEEecCcEE-----EecCCccccChHHhhcCCCC
Confidence 9999999999999999999999999999999875 55555 9999998887643 67788999999999877
Q ss_pred CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.++|+ |++|+++||| |++||...
T Consensus 220 kavDW-WalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 220 KAVDW-WALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred cchhH-HHHHHHHHHHHcCCCCCcCC
Confidence 78999 9999999999 89999853
No 11
>KOG0592|consensus
Probab=99.97 E-value=2.2e-32 Score=270.89 Aligned_cols=178 Identities=25% Similarity=0.363 Sum_probs=155.2
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
++++.||||++.++.+.. ...+-+.+|-.+|.+| .||.|+++|..|+++..+|+|+||+++|+|.++|++.+.+++..
T Consensus 96 ~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~c 175 (604)
T KOG0592|consen 96 ATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETC 175 (604)
T ss_pred CCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHH
Confidence 589999999998886643 3345678999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc---------ccC--CeEEEecccc
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI---------EQG--NTKVICSVFE 148 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~---------~~g--~t~v~~~~y~ 148 (477)
.+.++.||+.||+|||++|||||||||+|||++.|. ++.+.|||.+....++... ... .+.|||..|.
T Consensus 176 aR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm-hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYV 254 (604)
T KOG0592|consen 176 ARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG-HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYV 254 (604)
T ss_pred HHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC-cEEEeeccccccCChhhccccCccCcccccCcccceeeeeccc
Confidence 999999999999999999999999999999998764 5666799988755443221 112 4689999999
Q ss_pred ccccCCCC---CcccccCcceEEEEEE--eeecccccc
Q psy6508 149 PREIPSSK---TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 149 ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
+||++... ..+|+ |++||++|+| |.+||.+..
T Consensus 255 SPElL~~~~~~~~sDi-WAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 255 SPELLNDSPAGPSSDL-WALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred CHHHhcCCCCCcccch-HHHHHHHHHHhcCCCCCcccc
Confidence 99999887 78899 9999999999 889998654
No 12
>KOG0600|consensus
Probab=99.97 E-value=3.3e-31 Score=260.58 Aligned_cols=193 Identities=26% Similarity=0.348 Sum_probs=161.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCC-CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHE-KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~-~l~~~ 78 (477)
++|+.||+|++......+....-..+|+.||++|+||||+++.++..+. ..+|||+|||+ .+|.-++...+ .|++.
T Consensus 140 ~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd-hDL~GLl~~p~vkft~~ 218 (560)
T KOG0600|consen 140 ETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD-HDLSGLLSSPGVKFTEP 218 (560)
T ss_pred ccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc-chhhhhhcCCCcccChH
Confidence 5899999999998876665556678999999999999999999988766 68999999998 79999988754 79999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
+++.+++||+.||.|+|++||+|||||.+|||||++ .+++ .|||+++..+++.... -+..|.|.||.|||.+.|.
T Consensus 219 qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKi--aDFGLAr~y~~~~~~~-~T~rVvTLWYRpPELLLG~t 295 (560)
T KOG0600|consen 219 QIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKI--ADFGLARFYTPSGSAP-YTSRVVTLWYRPPELLLGAT 295 (560)
T ss_pred HHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEe--ccccceeeccCCCCcc-cccceEEeeccChHHhcCCc
Confidence 999999999999999999999999999999999875 4554 5999998655554322 3568999999999999987
Q ss_pred ---CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHHHHhhhh
Q psy6508 157 ---TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPA 205 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~~~l~~~ 205 (477)
.++|+ ||.|||+.||. .+++-+++..+..++..+.+-+-.|.
T Consensus 296 ~Yg~aVDl-WS~GCIl~El~------~gkPI~~G~tEveQl~kIfklcGSP~ 340 (560)
T KOG0600|consen 296 SYGTAVDL-WSVGCILAELF------LGKPILQGRTEVEQLHKIFKLCGSPT 340 (560)
T ss_pred ccccceee-hhhhHHHHHHH------cCCCCcCCccHHHHHHHHHHHhCCCC
Confidence 78999 99999999993 22333356778888888888655444
No 13
>KOG1069|consensus
Probab=99.97 E-value=4.8e-30 Score=223.12 Aligned_cols=207 Identities=25% Similarity=0.378 Sum_probs=181.4
Q ss_pred cceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccccccCCCCCcchHHH
Q psy6508 115 TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKEL 194 (477)
Q Consensus 115 ~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l 194 (477)
.+|.+-+..|+..+.+||+.+.+|+|++.|.+|||-++..++ -..-...+|+.+.|-.+ .+...++.+
T Consensus 4 ~lr~~~cei~iLsr~dGSs~fsqgdT~V~c~V~GP~dvk~r~------E~~~katleVi~rp~~G------~~~~~eK~~ 71 (217)
T KOG1069|consen 4 RLRGIACEISILSRPDGSSEFSQGDTKVICSVYGPIDVKARQ------EDPEKATLEVIWRPKSG------VNGTVEKVL 71 (217)
T ss_pred hhhhhhhhhceecCCCCccceecCCcEEEEEeeCCcchhhcc------cCchhceEEEEEecccC------cchHHHHHH
Confidence 345556788999999999999999999999999999998877 33445667888888776 456677999
Q ss_pred HHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEEEEEEEee-CCeEEeCCChHHH
Q psy6508 195 GNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALR-GGLTFIDPVEEEV 273 (477)
Q Consensus 195 ~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~a~s~~~~-~~~~~~Dp~~~E~ 273 (477)
+++|+.++++.+.++.|||..|.|.+|++++||+.+++||||||+||+||||||+.+++|+.+++. ++.+++||+..++
T Consensus 72 e~iI~~tl~~~I~l~l~Prt~iqVsiqvv~ddgs~LacaINaAclALvDaGIpl~~mfcai~~~~~~d~~lv~Dpt~~qe 151 (217)
T KOG1069|consen 72 ERIIRKTLSKAIILELYPRTTIQVSIQVVEDDGSTLACAINAACLALVDAGIPLRSMFCAISCALHEDGVLVLDPTAKQE 151 (217)
T ss_pred HHHHHHHHHHhheeeecCCceEEEEEEEEecCCcchHHHHHHHHHHHHhcCCchHHhhhhceEEEecCccEEECCcHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999998 5689999999999
Q ss_pred hhhccCCCCCCCCCceEEEEE---ccCCCcEEEEEEEeeecHHHHHHHHHHHHhcccchhhHHHHhHhhhcccc
Q psy6508 274 AYCQSLSSSEDDDSGVITLSY---MSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHVTL 344 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~a~---~~~~~~i~~~~~~g~~~~~~~~~~l~~~~~~~~~i~~~~i~~~l~~~~~l 344 (477)
... .+..++++ .....+|..+.+.|.++.++|+.+++.+..++..+++. +++.++++++.
T Consensus 152 k~~----------~~~~~lsf~~~~~~~~~vi~s~t~G~~~~d~lf~~le~a~~~~~~~f~f-~r~~~q~~~s~ 214 (217)
T KOG1069|consen 152 KIS----------TARATLSFEGGSLGEPKVIISETNGEKSEDQLFYVLELAQAAAQSLFPF-YREVLQRKYSK 214 (217)
T ss_pred hhh----------hceEEEEEecCCCCCcceEEEeccCCCCHHHHHHHHHhhHHHHHHHHHH-HHHHHHhhcCc
Confidence 853 44455544 22355799999999999999999999999999999999 99999887764
No 14
>KOG0591|consensus
Probab=99.97 E-value=3.7e-32 Score=249.48 Aligned_cols=174 Identities=26% Similarity=0.318 Sum_probs=150.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEE-EEEeCCe-EEEEEecCCCCCHHHHHHh----CCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERY-VYIILEYCDGGDLCSFIRS----HEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~-~~~~~~~-~~lv~e~~~g~sL~~~l~~----~~~l 75 (477)
.+|+.||.|.++-..++...++...+|+.+|++|+|||||++|+ .|.+++. ++||||+|.+|+|.++++. ++.+
T Consensus 42 ~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~i 121 (375)
T KOG0591|consen 42 LDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLI 121 (375)
T ss_pred cCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccC
Confidence 47899999999988888888899999999999999999999999 5655555 8999999999999999964 3469
Q ss_pred CHHHHHHHHHHHHHHHHHHHh--CC--cEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEecccccc
Q psy6508 76 SEFQCQQFVRQLVLALKFLRE--NN--VCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~--~g--ivHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~pp 150 (477)
++..+++++.|++.||..+|+ .. |.||||||.||+++.+ .+++ .|||+.+....+.. ...+.||||.||+|
T Consensus 122 pE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL--GDfGL~r~l~s~~t--fA~S~VGTPyYMSP 197 (375)
T KOG0591|consen 122 PEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL--GDFGLGRFLSSKTT--FAHSLVGTPYYMSP 197 (375)
T ss_pred chHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee--ccchhHhHhcchhH--HHHhhcCCCcccCH
Confidence 999999999999999999999 44 9999999999999875 4444 59999876554332 33578999999999
Q ss_pred ccCCCC---CcccccCcceEEEEEE--eeeccccc
Q psy6508 151 EIPSSK---TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 151 E~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
|.+.++ +++|+ ||+||++||| ..+||.+.
T Consensus 198 E~i~~~~Y~~kSDi-WslGCllyEMcaL~~PF~g~ 231 (375)
T KOG0591|consen 198 ERIHESGYNFKSDI-WSLGCLLYEMCALQSPFYGD 231 (375)
T ss_pred HHHhcCCCCcchhH-HHHHHHHHHHHhcCCCcccc
Confidence 999877 88999 9999999999 67999864
No 15
>KOG0583|consensus
Probab=99.97 E-value=5.4e-31 Score=264.33 Aligned_cols=176 Identities=31% Similarity=0.458 Sum_probs=151.7
Q ss_pred CCCcEEEEEEcccCCCC---hhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVS---ENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~ 77 (477)
.+|..||+|+++++... ....+.+.+|+.++++++ ||||+++++++.....+|+|||||.||+|.+++.+.+++.+
T Consensus 40 ~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E 119 (370)
T KOG0583|consen 40 LTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKE 119 (370)
T ss_pred cCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCCh
Confidence 36789999988776332 123456778999999998 99999999999999999999999999999999999889999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+++.+++|++.|++|+|++||+||||||+|||++.++..+.++|||++...++ ....-.|..|++.|+|||++.+.
T Consensus 120 ~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~--~~~~l~t~cGsp~Y~aPEvl~~~~ 197 (370)
T KOG0583|consen 120 DEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG--EDGLLKTFCGSPAYAAPEVLSGKG 197 (370)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC--CCCcccCCCCCcccCCHHHhCCCC
Confidence 999999999999999999999999999999999988644555569999876631 12344688999999999999875
Q ss_pred ----CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.++|+ ||+|+++|.| |+.||...
T Consensus 198 ~Y~g~~aDv-WS~GViLy~ml~G~~PF~d~ 226 (370)
T KOG0583|consen 198 TYSGKAADV-WSLGVILYVLLCGRLPFDDS 226 (370)
T ss_pred CcCCchhhh-hhhHHHHHHHHhCCCCCCCc
Confidence 67899 9999999999 88999864
No 16
>KOG0198|consensus
Probab=99.97 E-value=1e-29 Score=245.96 Aligned_cols=174 Identities=22% Similarity=0.328 Sum_probs=144.2
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC--eEEEEEecCCCCCHHHHHHhCC-CCCHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER--YVYIILEYCDGGDLCSFIRSHE-KLSEFQ 79 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~lv~e~~~g~sL~~~l~~~~-~l~~~~ 79 (477)
+|...|||.+....... .+.+.+|+.+|++++|||||++++...... .+++.|||++||+|.+++.+.+ .+++..
T Consensus 41 ~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~ 118 (313)
T KOG0198|consen 41 TGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPL 118 (313)
T ss_pred CCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHH
Confidence 47899999987763222 567899999999999999999999744333 6999999999999999999877 799999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCc-ccccCCeEEEeccccccccCC-CC-
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSA-YIEQGNTKVICSVFEPREIPS-SK- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~-~~~~g~t~v~~~~y~ppE~~~-~~- 156 (477)
++.+.+||++||.|||++||+||||||+|||++..+..+.+.|||.+....+.. .........+|+.||+||+.. +.
T Consensus 119 v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~ 198 (313)
T KOG0198|consen 119 VRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEV 198 (313)
T ss_pred HHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCc
Confidence 999999999999999999999999999999998832233445999988766521 222334678999999999998 43
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+||+++|| +..||..
T Consensus 199 ~~~~sDi-WSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 199 ARRESDI-WSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred CCccchh-hhcCCEEEeccCCCCcchh
Confidence 48999 9999999999 5577775
No 17
>KOG0659|consensus
Probab=99.97 E-value=1.4e-30 Score=237.43 Aligned_cols=191 Identities=24% Similarity=0.359 Sum_probs=161.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~ 80 (477)
++|+.||||+++..+..+.......+|++.|+.++||||+.++++|...+.+-||+||++ .+|...++... .++...+
T Consensus 25 ~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~pa~i 103 (318)
T KOG0659|consen 25 ETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSPADI 103 (318)
T ss_pred CCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCHHHH
Confidence 689999999999887666555678899999999999999999999999999999999998 89999998754 6899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+.|+.++++||+|||++.|+||||||.|+|++++ .+|+ .|||+++. .|+.. +.....|.|.||.|||.+.|.
T Consensus 104 K~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKi--ADFGLAr~-f~~p~-~~~~~~V~TRWYRAPELLfGsr~Y 179 (318)
T KOG0659|consen 104 KSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKI--ADFGLARF-FGSPN-RIQTHQVVTRWYRAPELLFGSRQY 179 (318)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEe--ecccchhc-cCCCC-cccccceeeeeccChHHhccchhc
Confidence 9999999999999999999999999999999865 4455 59999853 33332 222335999999999999887
Q ss_pred -CcccccCcceEEEEEE-eeeccccccccCCCCCcchHHHHHHHHHHhhhh
Q psy6508 157 -TSLEYQRSKGELYVEF-KFAPFASQIRTGWLRDSEEKELGNHLKRALEPA 205 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~-~~~Pf~~~~r~~~~~~~~~~~l~~~i~~~l~~~ 205 (477)
..+|+ ||.||++.|+ ...||- +++.+.+++..+++-.-.|.
T Consensus 180 g~~VDm-WavGCI~AELllr~P~f-------pG~sDidQL~~If~~LGTP~ 222 (318)
T KOG0659|consen 180 GTGVDM-WAVGCIFAELLLRVPFF-------PGDSDIDQLSKIFRALGTPT 222 (318)
T ss_pred CCcchh-hhHHHHHHHHHccCCCC-------CCCchHHHHHHHHHHcCCCC
Confidence 77899 9999999999 545555 67888889988887554443
No 18
>KOG0611|consensus
Probab=99.96 E-value=6.3e-31 Score=251.61 Aligned_cols=175 Identities=30% Similarity=0.468 Sum_probs=154.1
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
..|+.||||.+++..+. +...-.+++|++||..|+||||+.+|.+|+..+.+.|||||..+|.|.+|+...+.+++.++
T Consensus 76 ~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEa 155 (668)
T KOG0611|consen 76 KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREA 155 (668)
T ss_pred cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHH
Confidence 47899999999998774 34566789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+.+++||++|+.|+|.++++|||||.+|||+|.| ++++. |||++....... .-.|..|.+.|.+||+..+.
T Consensus 156 RhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIA--DFGLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~ 230 (668)
T KOG0611|consen 156 RHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIA--DFGLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYK 230 (668)
T ss_pred HHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeee--ccchhhhhcccc---HHHHhcCCcccCCccccCCCCCC
Confidence 9999999999999999999999999999999875 56655 999875322211 23578889999999999988
Q ss_pred -CcccccCcceEEEEEE--eeeccccccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFASQIR 182 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~~~r 182 (477)
+.+|- |++|+++|.+ |..||.+.+.
T Consensus 231 GPEVDs-WsLGvLLYtLVyGtMPFDG~Dh 258 (668)
T KOG0611|consen 231 GPEVDS-WSLGVLLYTLVYGTMPFDGRDH 258 (668)
T ss_pred CCccch-hhHHHHHHHHhhcccccCCchH
Confidence 77898 9999999998 7899987543
No 19
>KOG0661|consensus
Probab=99.96 E-value=4.1e-31 Score=258.15 Aligned_cols=184 Identities=22% Similarity=0.354 Sum_probs=150.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCC-eEEEEEecCCCCCHHHHHHhCC-CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDER-YVYIILEYCDGGDLCSFIRSHE-KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~-~~~lv~e~~~g~sL~~~l~~~~-~l~~~ 78 (477)
++|+.||||.++++..+-+..- =.||++.|++|+ ||||+++.+++.+.. .+|+|||||+ .+|.++++.++ .+++.
T Consensus 33 ~~~~~VAIK~MK~Kf~s~ee~~-nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~ 110 (538)
T KOG0661|consen 33 ETGELVAIKKMKKKFYSWEECM-NLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSES 110 (538)
T ss_pred CCCceeeHHHHHhhhccHHHHH-HHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHH
Confidence 5788999999998876643322 357999999998 999999999998877 9999999998 89999998754 69999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.++.|++||++||+|+|.+|+.|||+||+|||+.. +-+|+ .|||+++.......+ +..|-|.||+|||++.+.
T Consensus 111 ~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKi--aDFGLARev~SkpPY---TeYVSTRWYRAPEvLLrs~ 185 (538)
T KOG0661|consen 111 DIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKI--ADFGLAREVRSKPPY---TEYVSTRWYRAPEVLLRSG 185 (538)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEe--cccccccccccCCCc---chhhhcccccchHHhhhcc
Confidence 99999999999999999999999999999999984 45555 599999877655421 346888999999998876
Q ss_pred ---CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHH
Q psy6508 157 ---TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLK 199 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~ 199 (477)
.++|+ |++||+++|+. .-|+.|++..+.+++.++..
T Consensus 186 ~Ys~pvD~-wA~GcI~aEl~------sLrPLFPG~sE~Dqi~KIc~ 224 (538)
T KOG0661|consen 186 YYSSPVDM-WAVGCIMAELY------SLRPLFPGASEIDQIYKICE 224 (538)
T ss_pred ccCCchHH-HHHHHHHHHHH------HhcccCCCCcHHHHHHHHHH
Confidence 77999 99999999992 12223345555555555544
No 20
>KOG0597|consensus
Probab=99.96 E-value=1.4e-30 Score=258.48 Aligned_cols=196 Identities=26% Similarity=0.346 Sum_probs=162.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+.+.||||.+.+...+++..+.+.+|+++++.++||||+.++++|+...++|+|+|||. |+|..++...+.++++.++
T Consensus 25 ~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~-g~L~~il~~d~~lpEe~v~ 103 (808)
T KOG0597|consen 25 YTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAV-GDLFTILEQDGKLPEEQVR 103 (808)
T ss_pred cceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhh-hhHHHHHHhccCCCHHHHH
Confidence 467899999999998888888999999999999999999999999999999999999998 5999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||+++|+|||+||+|||++.+. .+..+|||+++...-.. ..-....||+.||+||...+. ..
T Consensus 104 ~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~-~~KlcdFg~Ar~m~~~t--~vltsikGtPlYmAPElv~e~pyd~~ 180 (808)
T KOG0597|consen 104 AIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG-TLKLCDFGLARAMSTNT--SVLTSIKGTPLYMAPELVEEQPYDHT 180 (808)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCcceeeecCCC-ceeechhhhhhhcccCc--eeeeeccCcccccCHHHHcCCCccch
Confidence 9999999999999999999999999999998753 33446999986433211 111234678899999999887 77
Q ss_pred ccccCcceEEEEEE--eeeccccccc----------cCCCCCcchHHHHHHHHHHh
Q psy6508 159 LEYQRSKGELYVEF--KFAPFASQIR----------TGWLRDSEEKELGNHLKRAL 202 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~~~r----------~~~~~~~~~~~l~~~i~~~l 202 (477)
+|. ||+||++||+ |.+||....- +..++..-...+..+++..+
T Consensus 181 sDl-WslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL 235 (808)
T KOG0597|consen 181 SDL-WSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLL 235 (808)
T ss_pred hhH-HHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHh
Confidence 899 9999999999 8899975431 11133444555666666544
No 21
>KOG0192|consensus
Probab=99.96 E-value=2e-30 Score=258.03 Aligned_cols=174 Identities=21% Similarity=0.248 Sum_probs=149.6
Q ss_pred CcE-EEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC-eEEEEEecCCCCCHHHHHHh--CCCCCHHH
Q psy6508 4 HTE-VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-YVYIILEYCDGGDLCSFIRS--HEKLSEFQ 79 (477)
Q Consensus 4 g~~-vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-~~~lv~e~~~g~sL~~~l~~--~~~l~~~~ 79 (477)
|.. ||+|++.....+....+.|.+|+.+|++++|||||+++|++.+.. ..+|||||+++|+|.+++.+ +..++...
T Consensus 64 g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~ 143 (362)
T KOG0192|consen 64 GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKV 143 (362)
T ss_pred CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHH
Confidence 556 999999887766655789999999999999999999999999887 79999999999999999988 56899999
Q ss_pred HHHHHHHHHHHHHHHHhCC-cEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC--C
Q psy6508 80 CQQFVRQLVLALKFLRENN-VCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS--K 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~--~ 156 (477)
+..|+.||+.|+.|||+++ ||||||||+|||++.+...+.++|||+++....+. .......||..|||||++.+ .
T Consensus 144 ~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~ 221 (362)
T KOG0192|consen 144 RLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKS 221 (362)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCC
Confidence 9999999999999999999 99999999999999875566667999997554332 12223578899999999993 3
Q ss_pred ---CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.++|+ ||+|+++||+ +-.||.+.
T Consensus 222 ~~~~K~Dv-ySFgIvlWEl~t~~~Pf~~~ 249 (362)
T KOG0192|consen 222 PYTEKSDV-YSFGIVLWELLTGEIPFEDL 249 (362)
T ss_pred cCCccchh-hhHHHHHHHHHHCCCCCCCC
Confidence 88999 9999999999 45688753
No 22
>KOG0593|consensus
Probab=99.96 E-value=1.7e-30 Score=240.75 Aligned_cols=187 Identities=21% Similarity=0.319 Sum_probs=154.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~ 80 (477)
++|+.||||++.-+..++...+-.++|+++|++|+|||+|.++.+|.....+++|+|||+ .++.+-|+... .++...+
T Consensus 25 ~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~d-hTvL~eLe~~p~G~~~~~v 103 (396)
T KOG0593|consen 25 DTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCD-HTVLHELERYPNGVPSELV 103 (396)
T ss_pred CcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecc-hHHHHHHHhccCCCCHHHH
Confidence 689999999987666555555668899999999999999999999999999999999998 56666676654 6999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+++++|++.|+.|+|+++++||||||+|||++.+++ +.+||||.++...+.. +..+..|.|.||.+||.+.+.
T Consensus 104 k~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gv-vKLCDFGFAR~L~~pg--d~YTDYVATRWYRaPELLvGDtqYG 180 (396)
T KOG0593|consen 104 KKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGV-VKLCDFGFARTLSAPG--DNYTDYVATRWYRAPELLVGDTQYG 180 (396)
T ss_pred HHHHHHHHHHhhhhhhcCeecccCChhheEEecCCc-EEeccchhhHhhcCCc--chhhhhhhhhhccChhhhcccCcCC
Confidence 999999999999999999999999999999987542 3346999987654311 223457889999999999885
Q ss_pred CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHH
Q psy6508 157 TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLK 199 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~ 199 (477)
.++|+ |+.||++.||. .+.+.|++..+.+++-.+.+
T Consensus 181 ~pVDi-WAiGCv~aEl~------~G~pL~PG~SDiDQLy~I~k 216 (396)
T KOG0593|consen 181 KPVDI-WAIGCVFAELL------TGEPLWPGRSDIDQLYLIRK 216 (396)
T ss_pred Ccccc-hhhhHHHHHHh------cCCcCCCCcchHHHHHHHHH
Confidence 78999 99999999995 44556677777777766654
No 23
>KOG0588|consensus
Probab=99.96 E-value=5.3e-30 Score=258.92 Aligned_cols=175 Identities=25% Similarity=0.418 Sum_probs=155.5
Q ss_pred CCCcEEEEEEcccC-CCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKT-KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~-~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
+||+.+|||++.+. ..++.....+.+|+-+|+-+.|||++++|++|+...++|+|.||++||.|++++-+++++++.++
T Consensus 35 ~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~ea 114 (786)
T KOG0588|consen 35 ETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREA 114 (786)
T ss_pred cccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHH
Confidence 68999999999887 55566667889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
.++++||+.|+.|+|..+|+||||||+|+|++..+- +.+.|||.+....+.... .|..|.+.|.+||+..|.
T Consensus 115 a~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~n-IKIADFGMAsLe~~gklL---eTSCGSPHYA~PEIV~G~pYdG 190 (786)
T KOG0588|consen 115 AHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNN-IKIADFGMASLEVPGKLL---ETSCGSPHYAAPEIVSGRPYDG 190 (786)
T ss_pred HHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccC-EeeeccceeecccCCccc---cccCCCcccCCchhhcCCCCCC
Confidence 999999999999999999999999999999986432 445599998765444332 477899999999999988
Q ss_pred CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
.++|+ ||.|+|+|-+ |..||.+.+
T Consensus 191 ~~sDV-WSCGVILfALLtG~LPFdDdN 216 (786)
T KOG0588|consen 191 RPSDV-WSCGVILFALLTGKLPFDDDN 216 (786)
T ss_pred Ccccc-chhHHHHHHHHhCCCCCCCcc
Confidence 78999 9999999998 789998754
No 24
>KOG0578|consensus
Probab=99.96 E-value=6e-30 Score=255.53 Aligned_cols=208 Identities=25% Similarity=0.375 Sum_probs=170.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||||++....... .+-+.+|+.+|+..+|+|||++++.|...+.+|+||||++||+|.+.+... .+++.++.
T Consensus 296 ~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~-~~~E~qIA 372 (550)
T KOG0578|consen 296 STKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT-RMTEGQIA 372 (550)
T ss_pred cCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc-cccHHHHH
Confidence 367889999998886544 356899999999999999999999998889999999999999999988764 69999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.+++++++||+|||.+||+|||||.+|||++. +.+++. |||++....... ..-.|.+||+.|||||+..+. +
T Consensus 373 ~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKlt--DFGFcaqi~~~~--~KR~TmVGTPYWMAPEVvtrk~YG~ 448 (550)
T KOG0578|consen 373 AICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLT--DFGFCAQISEEQ--SKRSTMVGTPYWMAPEVVTRKPYGP 448 (550)
T ss_pred HHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEe--eeeeeecccccc--CccccccCCCCccchhhhhhcccCc
Confidence 99999999999999999999999999999975 455555 999987655432 244689999999999999885 8
Q ss_pred cccccCcceEEEEEE--eeecccccccc---------CCCCCcchHHHHHHHHHHhhhhhhcccCCCCccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFASQIRT---------GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVD 217 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~~~r~---------~~~~~~~~~~l~~~i~~~l~~~i~~~~~Pr~~i~ 217 (477)
++|| ||+|++.+|| |-+||.....- +.+.-.....++..++..|..+++.+...|....
T Consensus 449 KVDI-WSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~ 518 (550)
T KOG0578|consen 449 KVDI-WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAK 518 (550)
T ss_pred cccc-hhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHH
Confidence 9999 9999999999 88999853211 2233344556677777777777776666666543
No 25
>KOG0582|consensus
Probab=99.96 E-value=1.9e-29 Score=244.79 Aligned_cols=175 Identities=28% Similarity=0.399 Sum_probs=151.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
+.+..||||+++.+..+.+ .+.+++|++.|+.++||||++++..|..+..+|+||.||.+|++.++++.. ..+++..
T Consensus 49 p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~ 127 (516)
T KOG0582|consen 49 PTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEAS 127 (516)
T ss_pred ccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHH
Confidence 4678999999999887765 788999999999999999999999999999999999999999999999874 3599999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceeccc--CCc-ccccCCeEEEeccccccccCCC
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAK--GSA-YIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~--gs~-~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
+..|++++++||.|||.+|.+|||||+.||||+++ .+++. |||++.... |.. ..+. +|.++++.|++||++..
T Consensus 128 Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLa--dFgvsa~l~~~G~R~~~rf-~tfvgtp~wmAPEvl~q 204 (516)
T KOG0582|consen 128 IATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLA--DFGVSASLFDSGDRQVTRF-NTFVGTPCWMAPEVLMQ 204 (516)
T ss_pred HHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEc--CceeeeeecccCceeeEee-ccccCcccccChHHhhh
Confidence 99999999999999999999999999999999764 55555 888775432 221 1222 78899999999999654
Q ss_pred C-----CcccccCcceEEEEEE--eeecccccc
Q psy6508 156 K-----TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 156 ~-----~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
. .++|| ||+|++.+|+ |.+||....
T Consensus 205 ~~~GYdfKaDI-wSfGITA~ELA~G~aPf~k~p 236 (516)
T KOG0582|consen 205 QLHGYDFKADI-WSFGITACELAHGHAPFSKYP 236 (516)
T ss_pred cccCccchhhh-hhhhHHHHHHhcCCCCcccCC
Confidence 4 88999 9999999999 889998644
No 26
>KOG0605|consensus
Probab=99.96 E-value=1.4e-29 Score=251.11 Aligned_cols=176 Identities=23% Similarity=0.403 Sum_probs=152.1
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.||+.+|+|++++..+- ..+.+.++.|-.+|....+|+||++|-.|++..++||||||++||++..+|.+.+.+++..+
T Consensus 164 ~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~a 243 (550)
T KOG0605|consen 164 DTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWA 243 (550)
T ss_pred cCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHH
Confidence 68999999999988763 35567789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCc---------------------ccc--
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSA---------------------YIE-- 136 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~---------------------~~~-- 136 (477)
+.++.+++.|+..||+.|++||||||+|+|||. +.+|+. |||++.....+. ...
T Consensus 244 rfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLS--DFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (550)
T KOG0605|consen 244 RFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLS--DFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKF 321 (550)
T ss_pred HHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeec--cccccchhhhhhhhhhhcchhhhhhhhccCCCcccccc
Confidence 999999999999999999999999999999986 566666 999874321100 000
Q ss_pred -----c-----------------CCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeeccccc
Q psy6508 137 -----Q-----------------GNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 137 -----~-----------------g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
. -...+|||-|+|||++.+. ...|+ ||+|||+||| ||+||.+.
T Consensus 322 ~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw-WSLG~ImyEmLvGyPPF~s~ 391 (550)
T KOG0605|consen 322 NTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW-WSLGCIMYEMLVGYPPFCSE 391 (550)
T ss_pred ccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH-HHHHHHHHHHHhCCCCCCCC
Confidence 0 0146899999999999887 77899 9999999999 99999963
No 27
>KOG0610|consensus
Probab=99.96 E-value=2.7e-29 Score=241.88 Aligned_cols=179 Identities=23% Similarity=0.427 Sum_probs=147.6
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~ 78 (477)
.++..+|+|++.+.... .+...+...|..||+.++||+++.+|..|+.+...|++||||+||+|..+++++ +.+++.
T Consensus 100 ~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~ 179 (459)
T KOG0610|consen 100 GTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSES 179 (459)
T ss_pred CCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchh
Confidence 45689999999988764 455678899999999999999999999999999999999999999999999875 379999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCC------------------------c
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGS------------------------A 133 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs------------------------~ 133 (477)
.++.++.+++.||+|||..|||+|||||+||||.++ .+-+. ||.++.++..+ +
T Consensus 180 ~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLs--DFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~ 257 (459)
T KOG0610|consen 180 AARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLS--DFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSC 257 (459)
T ss_pred hHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEee--eccccccCCCCCeeeccCCCCCCCCCcccccccccc
Confidence 999999999999999999999999999999999764 44444 44443222110 0
Q ss_pred c------------------------------cccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeeccc
Q psy6508 134 Y------------------------------IEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 134 ~------------------------------~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
. -...+..|||-.|.|||++.|. .++|+ |.+|+++||| |..||.
T Consensus 258 f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDW-WtfGIflYEmLyG~TPFK 336 (459)
T KOG0610|consen 258 FSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDW-WTFGIFLYEMLYGTTPFK 336 (459)
T ss_pred cccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhH-HHHHHHHHHHHhCCCCcC
Confidence 0 0112356888889999999987 88999 9999999999 668998
Q ss_pred ccccc
Q psy6508 179 SQIRT 183 (477)
Q Consensus 179 ~~~r~ 183 (477)
+.++.
T Consensus 337 G~~~~ 341 (459)
T KOG0610|consen 337 GSNNK 341 (459)
T ss_pred CCCch
Confidence 75543
No 28
>KOG0594|consensus
Probab=99.96 E-value=5.2e-29 Score=237.48 Aligned_cols=191 Identities=28% Similarity=0.358 Sum_probs=157.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCC-ccceEEEEEeCC------eEEEEEecCCCCCHHHHHHhCC-
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQH-IVTMLDFLWDER------YVYIILEYCDGGDLCSFIRSHE- 73 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~~~~~~~~------~~~lv~e~~~g~sL~~~l~~~~- 73 (477)
.+|+.||+|++..+...+.......+|+.+|+.|+|+| |+++++++..++ .+++|+||++ .+|..++....
T Consensus 34 ~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~ 112 (323)
T KOG0594|consen 34 RTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPK 112 (323)
T ss_pred cCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccc
Confidence 47899999999887654444456789999999999999 999999998777 8999999998 89999998755
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccc
Q psy6508 74 ---KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEP 149 (477)
Q Consensus 74 ---~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~p 149 (477)
.++...++.+++||+.||.|||++||+||||||+|||+++. .++ ++|||+++... -. ...-.+.+.|.||.|
T Consensus 113 ~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lK--laDFGlAra~~-ip-~~~yt~evvTlWYRa 188 (323)
T KOG0594|consen 113 KPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLK--LADFGLARAFS-IP-MRTYTPEVVTLWYRA 188 (323)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEe--eeccchHHHhc-CC-cccccccEEEeeccC
Confidence 47888999999999999999999999999999999999874 454 45999986322 11 123457899999999
Q ss_pred cccCCCC----CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHHHHhhh
Q psy6508 150 REIPSSK----TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEP 204 (477)
Q Consensus 150 pE~~~~~----~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~~~l~~ 204 (477)
||++.+. ..+|+ ||+||++.||. .+++.++++.+..++.++.+-.-.|
T Consensus 189 PEvLlGs~~Ys~~vDi-Ws~GcIfaEm~------~~~~LFpG~se~~ql~~If~~lGtP 240 (323)
T KOG0594|consen 189 PEVLLGSTSYSTSVDI-WSLGCIFAEMF------TRRPLFPGDSEIDQLFRIFRLLGTP 240 (323)
T ss_pred HHHhcCCCcCCCCcch-HhHHHHHHHHH------hCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 9999887 77899 99999999995 2455667788888888887754433
No 29
>KOG0660|consensus
Probab=99.96 E-value=2.3e-29 Score=239.27 Aligned_cols=175 Identities=25% Similarity=0.332 Sum_probs=147.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe-----CCeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD-----ERYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-----~~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+|+.||||++.....+.-..++..+|+++|+.++|+||+.+++++.. -+.+|+|+|+|+ .+|.+.++.+..++
T Consensus 45 ~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~~~~L~ 123 (359)
T KOG0660|consen 45 RTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKSQQDLT 123 (359)
T ss_pred CCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh-hHHHHHHHcCcccc
Confidence 578999999998777677777889999999999999999999999865 246999999996 89999999987799
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
+..+..+++|++.||+|+|+.|++||||||.|++++.+. .+.++|||+++..+.......-+..+.|.||.+||.....
T Consensus 124 d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c-~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~ 202 (359)
T KOG0660|consen 124 DDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC-DLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNS 202 (359)
T ss_pred HHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC-CEEeccccceeeccccCcccchhcceeeeeecCHHHHhcc
Confidence 999999999999999999999999999999999998762 4466799999887643111111347889999999998655
Q ss_pred ----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||.|||+.|| +.+-|.|
T Consensus 203 ~~Yt~aiDi-WSvGCI~AEmL~gkplFpG 230 (359)
T KOG0660|consen 203 SEYTKAIDI-WSVGCILAEMLTGKPLFPG 230 (359)
T ss_pred ccccchhhh-hhhhHHHHHHHcCCCCCCC
Confidence 77899 9999999999 3344443
No 30
>PRK00173 rph ribonuclease PH; Reviewed
Probab=99.95 E-value=2.7e-27 Score=223.83 Aligned_cols=210 Identities=20% Similarity=0.265 Sum_probs=185.7
Q ss_pred CcceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeecccccccc-----CCCCC
Q psy6508 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT-----GWLRD 188 (477)
Q Consensus 114 ~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~-----~~~~~ 188 (477)
+++|.+.+.+|....++||++++.|+|++.+.++++.+..... +- -..|.+.+++.+.||++..+. ...++
T Consensus 9 ~e~R~i~~~~g~~~~a~GSa~v~~G~T~Vla~V~~~~~~p~~~---~~-~~~g~l~v~~~~~p~a~~~~~~~~~~~g~~~ 84 (238)
T PRK00173 9 DQLRPVTITRNFTKHAEGSVLVEFGDTKVLCTASVEEGVPRFL---KG-QGQGWVTAEYGMLPRATHTRNDREAAKGKQG 84 (238)
T ss_pred ccccCeEEEeCCCCCCCeeEEEEecCcEEEEEEEcCCCCCCcc---CC-CCcEEEEEEEecCCCCCcccccccccCCCCC
Confidence 5789999999999999999999999999999999876654322 11 346899999999999987663 22455
Q ss_pred cchHHHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhC-----------CCCCCceEEEEEE
Q psy6508 189 SEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDA-----------AIPMYDLVTSSTL 257 (477)
Q Consensus 189 ~~~~~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~da-----------gi~m~~~v~a~s~ 257 (477)
....++++.+++.+++.+.++.+|+..++|.+++|++||+.+.+++||+++||+|| |+||.++++++|+
T Consensus 85 ~~~~~~sr~i~r~lr~~i~l~~l~~~~i~v~v~VL~~DG~~~~aai~Aa~~AL~da~~~~~~~~~~~~ip~~~~~~~vt~ 164 (238)
T PRK00173 85 GRTQEIQRLIGRSLRAVVDLKALGERTITIDCDVIQADGGTRTASITGAYVALADALNKLVARGKLKKNPLKDQVAAVSV 164 (238)
T ss_pred ccHHHHHHHHHHHHHHhcCHHHcCCeEEEEEEEEEeCCCCHHHHHHHHHHHHHHHhhhhhhccCcccCCcccCceeEEEE
Confidence 67899999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EeeCCeEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEe---eecHHHHHHHHHHHHhcccchhhHHH
Q psy6508 258 ALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVG---TIQQERLADHIEQLIGCCESLCTDRV 334 (477)
Q Consensus 258 ~~~~~~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g---~~~~~~~~~~l~~~~~~~~~i~~~~i 334 (477)
++.++.+++|||.+||.. +.+.+++++ ++.++|+.+++.| .++.+++.++++.|.++|+++.+. +
T Consensus 165 ~~~~~~~lvDpt~~Ee~~----------~~~~l~v~~-~~~~~i~~v~~~g~g~~~~~e~l~~~i~~A~~~~~~l~~~-~ 232 (238)
T PRK00173 165 GIVDGEPVLDLDYEEDSA----------AETDMNVVM-TGSGGFVEVQGTAEGAPFSREELDALLDLAEKGIAELVAL-Q 232 (238)
T ss_pred EEECCEEEECCCHHHHhc----------CCceEEEEE-CCCCCEEEEEccCCCCCcCHHHHHHHHHHHHHHHHHHHHH-H
Confidence 999999999999999984 478899986 5577899999854 699999999999999999999999 8
Q ss_pred HhHhh
Q psy6508 335 QKLVS 339 (477)
Q Consensus 335 ~~~l~ 339 (477)
++.|.
T Consensus 233 ~~~l~ 237 (238)
T PRK00173 233 KAALA 237 (238)
T ss_pred HHHhc
Confidence 88775
No 31
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.95 E-value=5.4e-28 Score=240.62 Aligned_cols=174 Identities=17% Similarity=0.275 Sum_probs=145.5
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||||++++... .......+.+|+.++++++||||+++++++...+.+|+||||++|++|.+++..++.+++..+
T Consensus 18 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 97 (323)
T cd05571 18 ATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA 97 (323)
T ss_pred CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence 5789999999976543 233456788999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
+.++.||+.||+|||++||+||||||+||+++.+. .+.++|||++....... ....+..+++.|+|||...+. .
T Consensus 98 ~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~-~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ 174 (323)
T cd05571 98 RFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG-HIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGR 174 (323)
T ss_pred HHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC-CEEEeeCCCCcccccCC--CcccceecCccccChhhhcCCCCCc
Confidence 99999999999999999999999999999997653 34445999875422111 122346788999999998765 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|+++||| +..||.+
T Consensus 175 ~~Di-wSlG~il~elltg~~Pf~~ 197 (323)
T cd05571 175 AVDW-WGLGVVMYEMMCGRLPFYN 197 (323)
T ss_pred cccC-cccchhhhhhhcCCCCCCC
Confidence 7899 9999999999 6678764
No 32
>KOG0585|consensus
Probab=99.95 E-value=8.4e-29 Score=241.78 Aligned_cols=174 Identities=28% Similarity=0.425 Sum_probs=140.0
Q ss_pred CCCcEEEEEEcccCCCChh------------HHHHHHHHHHHHHhcCCCCccceEEEEEe--CCeEEEEEecCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSEN------------RFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDLCS 67 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~------------~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv~e~~~g~sL~~ 67 (477)
.+++.||||++.+...... ..++..+|+.+|++++|||||+++.+..+ .+.+|||+|||..|.+..
T Consensus 120 ~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w 199 (576)
T KOG0585|consen 120 VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKW 199 (576)
T ss_pred CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCcccc
Confidence 3689999999988654321 23578999999999999999999999864 457999999999888754
Q ss_pred HHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecc-----cCCcccccCCeE
Q psy6508 68 FIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA-----KGSAYIEQGNTK 141 (477)
Q Consensus 68 ~l~~~~~-l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~-----~gs~~~~~g~t~ 141 (477)
.=. .+. +++.++++++++++.||+|||.+||+||||||+|+|+++++ ++.+.|||++..+ .|+-. +-...
T Consensus 200 ~p~-d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g-~VKIsDFGVs~~~~~~~~~~~d~--~L~~t 275 (576)
T KOG0585|consen 200 CPP-DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG-TVKISDFGVSNEFPQGSDEGSDD--QLSRT 275 (576)
T ss_pred CCC-CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC-cEEeeccceeeecccCCccccHH--HHhhc
Confidence 322 234 89999999999999999999999999999999999997753 3344599998754 12211 11237
Q ss_pred EEeccccccccCCCC-------CcccccCcceEEEEEE--eeeccccc
Q psy6508 142 VICSVFEPREIPSSK-------TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 142 v~~~~y~ppE~~~~~-------~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
+||+.|+|||...+. .+.|+ |++|+++|-+ |..||.+.
T Consensus 276 vGTPAF~APE~c~~~~~~~~~g~a~Di-WalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 276 VGTPAFFAPELCSGGNSFSYSGFALDI-WALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred CCCccccchHhhcCCCCccccchhhhh-hhhhhhHHHhhhccCCcccc
Confidence 999999999998773 77899 9999999998 77899864
No 33
>KOG0658|consensus
Probab=99.95 E-value=1.7e-29 Score=240.58 Aligned_cols=228 Identities=25% Similarity=0.338 Sum_probs=169.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC-----eEEEEEecCCCCCHHHHHHh----C
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-----YVYIILEYCDGGDLCSFIRS----H 72 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-----~~~lv~e~~~g~sL~~~l~~----~ 72 (477)
++++.||||++-.+..-. .+|+++|+.+.|||||++.-+|.... ...+||||++ .+|.++++. +
T Consensus 47 e~~~~vAIKKv~~d~r~k------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP-~tL~~~~r~~~~~~ 119 (364)
T KOG0658|consen 47 ETEEEVAIKKVLQDKRYK------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP-ETLYRVIRHYTRAN 119 (364)
T ss_pred CCCceeEEEEecCCCCcC------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch-HHHHHHHHHHhhcC
Confidence 467899999876553211 27999999999999999988876432 4569999998 899999984 4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 73 EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 73 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
.+++...++-+.+||..||.|||+.||+||||||+|+|+|.+...+.++|||.++..... +...+.+.+..|.|||.
T Consensus 120 ~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~---epniSYicSRyYRaPEL 196 (364)
T KOG0658|consen 120 QRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG---EPNISYICSRYYRAPEL 196 (364)
T ss_pred CCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccC---CCceeEEEeccccCHHH
Confidence 679999999999999999999999999999999999999998888888999998764422 12346677778999999
Q ss_pred CCCC----CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHHHHhhh----------hhhcccC-------
Q psy6508 153 PSSK----TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEP----------AVCRHEF------- 211 (477)
Q Consensus 153 ~~~~----~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~~~l~~----------~i~~~~~------- 211 (477)
+.+. .++|+ ||.||++.||. .+++-++++....++..+++-.-.| .-...++
T Consensus 197 ifga~~Yt~~IDi-WSaGCV~aELl------~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~ 269 (364)
T KOG0658|consen 197 IFGATEYTTSIDI-WSAGCVMAELL------KGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHP 269 (364)
T ss_pred HcCccccCceeEE-hhhhHHHHHHh------cCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccccc
Confidence 9987 78999 99999999993 2223334555556666666522111 1111222
Q ss_pred ---------CCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCC
Q psy6508 212 ---------SNFQVDLFVLVLQNDGSALSAAINCANLALVDAAI 246 (477)
Q Consensus 212 ---------Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi 246 (477)
|...++....+|+-++..+.++..|.+..+.|.-.
T Consensus 270 ~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 270 WHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred ceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 22334445556667777888888888877776643
No 34
>KOG0663|consensus
Probab=99.95 E-value=1.8e-28 Score=230.17 Aligned_cols=188 Identities=24% Similarity=0.330 Sum_probs=155.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCC-CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHE-KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~-~l~~~ 78 (477)
.+++.||+|+++.+.-.....-.-.+|+.+|.+.+|||||.+-.+.... +.+|||||||+ .+|..++...+ ++...
T Consensus 99 ~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E-hDLksl~d~m~q~F~~~ 177 (419)
T KOG0663|consen 99 KTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE-HDLKSLMETMKQPFLPG 177 (419)
T ss_pred CcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH-hhHHHHHHhccCCCchH
Confidence 5788999999988764333233467999999999999999999987644 47999999998 89999998865 89999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
+++.++.|++.|++|||.+.|+||||||+|+|++. +.+|+. |||+++ ..|+.. ..-+..|.|.||.|||.+.+.
T Consensus 178 evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKia--DFGLAR-~ygsp~-k~~T~lVVTLWYRaPELLLG~~ 253 (419)
T KOG0663|consen 178 EVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIA--DFGLAR-EYGSPL-KPYTPLVVTLWYRAPELLLGAK 253 (419)
T ss_pred HHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEec--ccchhh-hhcCCc-ccCcceEEEeeecCHHHhcCCc
Confidence 99999999999999999999999999999999965 566665 999985 455552 223467999999999999887
Q ss_pred ---CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHHHH
Q psy6508 157 ---TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRA 201 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~~~ 201 (477)
.++|+ ||.|||+-|+. ..++.+++..+..++.++++-.
T Consensus 254 tyst~iDM-WSvGCI~aE~l------~~kPlf~G~sE~dQl~~If~ll 294 (419)
T KOG0663|consen 254 TYSTAVDM-WSVGCIFAELL------TQKPLFPGKSEIDQLDKIFKLL 294 (419)
T ss_pred ccCcchhh-hhHHHHHHHHH------hcCCCCCCCchHHHHHHHHHHh
Confidence 78999 99999999994 2334446778888888887743
No 35
>TIGR01966 RNasePH ribonuclease PH. This bacterial enzyme, ribonuclease PH, performs the final 3'-trimming and modification of tRNA precursors. This model is restricted absolutely to bacteria. Related families outside the model include proteins described as probable exosome complex exonucleases (rRNA processing) and polyribonucleotide nucleotidyltransferases (mRNA degradation). The most divergent member within the family is RNase PH from Deinococcus radiodurans.
Probab=99.95 E-value=9.3e-27 Score=220.05 Aligned_cols=209 Identities=22% Similarity=0.279 Sum_probs=180.8
Q ss_pred CcceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccccccC-----CCCC
Q psy6508 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTG-----WLRD 188 (477)
Q Consensus 114 ~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~-----~~~~ 188 (477)
+++|.+.+.+|++..++||++++.|+|++.+.++.+.+..... +- -.-|.+.+++.+.||++..+.. ....
T Consensus 8 ~e~R~i~i~~G~~~~A~GSa~v~~G~T~Vla~V~~~~~~p~~~---~~-~~~g~l~v~~~~~p~a~~~~~~r~~~~g~~~ 83 (236)
T TIGR01966 8 DQLRPVSITRDFLKHAEGSVLIEFGNTKVLCTASVEEKVPPFL---RG-SGEGWITAEYGMLPRATQTRNRRESAKGKQS 83 (236)
T ss_pred CCccCeEEEeCCcCCCCceEEEEecCCEEEEEEEccCccCCcc---cC-CCcEEEEEEEecCCCCCCCCccccccCCCCC
Confidence 5788999999999999999999999999999999544432211 11 2468999999999999865421 1233
Q ss_pred cchHHHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhC-----------CCCCCceEEEEEE
Q psy6508 189 SEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDA-----------AIPMYDLVTSSTL 257 (477)
Q Consensus 189 ~~~~~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~da-----------gi~m~~~v~a~s~ 257 (477)
....++++.+++.+++.+.++.||+..|+|.+++|++||+.+++|+||+++||+|| |+||+++++++|+
T Consensus 84 ~~~~e~~~~i~r~lr~~i~l~~l~~~~i~I~v~VL~~DG~~~~aai~Aa~aAL~da~~~~~~~~~~~~ip~~~~~~~vt~ 163 (236)
T TIGR01966 84 GRTQEIQRLIGRALRAVVDLEALGERTIWIDCDVIQADGGTRTASITGAFVALADAISKLHKRGILKESPIRDFVAAVSV 163 (236)
T ss_pred ccHHHHHHHHHHHHHHhcCHhhcCCeEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHhhhhcCcccCCCccCceeEEEE
Confidence 35778999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EeeCCeEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEE---eeecHHHHHHHHHHHHhcccchhhHHH
Q psy6508 258 ALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLV---GTIQQERLADHIEQLIGCCESLCTDRV 334 (477)
Q Consensus 258 ~~~~~~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~---g~~~~~~~~~~l~~~~~~~~~i~~~~i 334 (477)
++.++.+++|||..||.. ..+.+++++.+ .++|+.++.. +.++.+++.++++.|.++|+.+++. +
T Consensus 164 ~~~~~~~v~Dpt~~Ee~~----------~~~~l~l~~~~-~~~i~~i~~~g~~~~~~~~~l~~~i~~a~~~~~~l~~~-~ 231 (236)
T TIGR01966 164 GIVDGEPVLDLDYEEDSA----------ADVDMNVVMTG-SGGFVEVQGTAEEGPFSRDELNKLLDLAKKGIRELIEL-Q 231 (236)
T ss_pred EEECCEEEECCChhHHhc----------cCceEEEEEcC-CCCEEEEEecCCCCCcCHHHHHHHHHHHHHHHHHHHHH-H
Confidence 999999999999999984 46889998754 6899999985 4799999999999999999999999 8
Q ss_pred HhHh
Q psy6508 335 QKLV 338 (477)
Q Consensus 335 ~~~l 338 (477)
++.|
T Consensus 232 ~~~l 235 (236)
T TIGR01966 232 KQAL 235 (236)
T ss_pred HHHh
Confidence 8765
No 36
>KOG0589|consensus
Probab=99.95 E-value=2e-28 Score=243.10 Aligned_cols=175 Identities=27% Similarity=0.369 Sum_probs=152.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCe-EEEEEecCCCCCHHHHHHhCC--CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY-VYIILEYCDGGDLCSFIRSHE--KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~-~~lv~e~~~g~sL~~~l~~~~--~l~~~ 78 (477)
.+++.|++|.+.....++..++...+|+.++++++|||||.+++.|+.++. .+|+|+||+||+|.+.+.+.+ .++++
T Consensus 27 ~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~ 106 (426)
T KOG0589|consen 27 SDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEE 106 (426)
T ss_pred cCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHH
Confidence 356789999999999888777889999999999999999999999998887 999999999999999997754 59999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+..|+.|++.|+.|||+++|+|||||+.|||++.+ .+++ .|||+++...... ..-.|.+||+.|++||.+.+.
T Consensus 107 ~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkL--gDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~p 182 (426)
T KOG0589|consen 107 RILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKL--GDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIP 182 (426)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceee--cchhhhhhcCCch--hhhheecCCCcccCHHHhCCCC
Confidence 999999999999999999999999999999999765 4544 5999987544322 234588999999999999887
Q ss_pred --CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
.++|+ |++||++||| ..++|...+
T Consensus 183 Yn~KSDi-WsLGC~~yEm~~lk~aF~a~~ 210 (426)
T KOG0589|consen 183 YNEKSDI-WSLGCCLYEMCTLKPAFKASN 210 (426)
T ss_pred CCccCcc-hhhcchHHHHHhcccccCccc
Confidence 88999 9999999999 446666543
No 37
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.95 E-value=3.6e-27 Score=234.88 Aligned_cols=174 Identities=17% Similarity=0.279 Sum_probs=144.0
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||+|++++... .......+.+|+.+++.++||||+++++++...+..|+||||++|++|..++...+.+++..+
T Consensus 18 ~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~ 97 (325)
T cd05594 18 ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA 97 (325)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence 4789999999976543 233456778999999999999999999999999999999999999999999988788999999
Q ss_pred HHHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+.++.|++.||.|||+ +||+||||||+|||++.+. .+.++|||++....... ....+..++..|+|||...+.
T Consensus 98 ~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~-~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (325)
T cd05594 98 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYG 174 (325)
T ss_pred HHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC-CEEEecCCCCeecCCCC--cccccccCCcccCCHHHHccCCCC
Confidence 9999999999999997 7999999999999997653 34445999875432211 111244678899999998665
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 175 ~~~Di-wslG~il~el~tG~~Pf~~ 198 (325)
T cd05594 175 RAVDW-WGLGVVMYEMMCGRLPFYN 198 (325)
T ss_pred Ccccc-ccccceeeeeccCCCCCCC
Confidence 77899 9999999999 6678864
No 38
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.95 E-value=2.7e-27 Score=235.01 Aligned_cols=174 Identities=22% Similarity=0.310 Sum_probs=144.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+|+.||+|++++..........+.+|+.++++++||||+++++++..++.+|+||||++|++|.+++.+...+++..+.
T Consensus 22 ~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~ 101 (318)
T cd05582 22 DAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 101 (318)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHH
Confidence 46889999999865544444566789999999999999999999999999999999999999999999887789999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++||+||||||+||+++.+. .+.++|||++....... ....+..++..|+|||...+. .+
T Consensus 102 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~ 178 (318)
T cd05582 102 FYLAELALALDHLHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQS 178 (318)
T ss_pred HHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC-cEEEeeccCCcccCCCC--CceecccCChhhcCHHHHcCCCCCCc
Confidence 9999999999999999999999999999997643 34445999875433211 111234567889999988665 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|+++|++ +..||..
T Consensus 179 ~Di-wslG~il~el~tg~~p~~~ 200 (318)
T cd05582 179 ADW-WSFGVLMFEMLTGSLPFQG 200 (318)
T ss_pred cce-eccceEeeeeccCCCCCCC
Confidence 899 9999999999 5677764
No 39
>KOG0667|consensus
Probab=99.95 E-value=9.6e-28 Score=244.05 Aligned_cols=183 Identities=27% Similarity=0.388 Sum_probs=153.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-C-----CCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-H-----QHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-- 73 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-H-----pnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-- 73 (477)
++++.||||++++.. ....+...|+.+|..|+ | -|+|+++++|...+++|||+|.++ .+|.++++.++
T Consensus 209 ~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~ 284 (586)
T KOG0667|consen 209 KTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFR 284 (586)
T ss_pred CCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCC
Confidence 589999999997653 44566788999999996 4 389999999999999999999997 89999999864
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
.++...++.++.||+.||.+||+.||||+||||+||||.+ +..++..+|||.+.......+ |.+.+..|.|||+
T Consensus 285 Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEV 359 (586)
T KOG0667|consen 285 GLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEV 359 (586)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce-----eeeeccccccchh
Confidence 6899999999999999999999999999999999999953 444666669998865553332 7788889999999
Q ss_pred CCCC---CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHHH
Q psy6508 153 PSSK---TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKR 200 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~~ 200 (477)
+.|. .+.|+ ||+|||+.||- .+.+.++++.+-.++..+++-
T Consensus 360 ILGlpY~~~IDm-WSLGCIlAEL~------tG~PLfpG~ne~DQl~~I~e~ 403 (586)
T KOG0667|consen 360 ILGLPYDTAIDM-WSLGCILAELF------TGEPLFPGDNEYDQLARIIEV 403 (586)
T ss_pred hccCCCCCccce-eehhhhHHhHh------cCccccCCCCHHHHHHHHHHH
Confidence 9988 88999 99999999993 223344578888888888763
No 40
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.95 E-value=1.3e-27 Score=239.43 Aligned_cols=170 Identities=24% Similarity=0.418 Sum_probs=143.9
Q ss_pred CcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHH
Q psy6508 4 HTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82 (477)
Q Consensus 4 g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~ 82 (477)
+..||+|++.+... .....+.+.+|+.+++.++||||+++++++..++.+|+||||++||+|.+++...+.+++..+..
T Consensus 56 ~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~ 135 (340)
T PTZ00426 56 FPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCF 135 (340)
T ss_pred CeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHH
Confidence 46899999876533 23345678899999999999999999999999999999999999999999999888899999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Ccc
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSL 159 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~ 159 (477)
++.|++.||.|||++||+||||||+|||++.++ .+.++|||++...+.. ..+..+++.|+|||+..+. .++
T Consensus 136 ~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~-~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~ 209 (340)
T PTZ00426 136 YAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG-FIKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAA 209 (340)
T ss_pred HHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC-CEEEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccc
Confidence 999999999999999999999999999997643 3444599988654322 2355678899999998655 678
Q ss_pred cccCcceEEEEEE--eeeccccc
Q psy6508 160 EYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 160 Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
|+ ||+|+++||| |..||.+.
T Consensus 210 Di-wSlGvil~ell~G~~Pf~~~ 231 (340)
T PTZ00426 210 DW-WTLGIFIYEILVGCPPFYAN 231 (340)
T ss_pred cc-cchhhHHHHHhcCCCCCCCC
Confidence 99 9999999999 67888753
No 41
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.95 E-value=7.8e-28 Score=240.11 Aligned_cols=171 Identities=27% Similarity=0.448 Sum_probs=145.4
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||+|++++... .....+.+.+|+.++++++||||+++++.+..++..|++|||++|++|.+++.+.+.+++..+
T Consensus 41 ~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 120 (329)
T PTZ00263 41 GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVA 120 (329)
T ss_pred CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHH
Confidence 4688999999876533 223456789999999999999999999999999999999999999999999998888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++||+||||||+|||++.+. .+.++|||.+....... .+..+++.|+|||...+. .
T Consensus 121 ~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~ 194 (329)
T PTZ00263 121 KFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG-HVKVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGK 194 (329)
T ss_pred HHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC-CEEEeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCC
Confidence 99999999999999999999999999999997653 34445999886544322 245678889999998766 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|+++|++ +..||.+
T Consensus 195 ~~Di-wslG~il~elltg~~pf~~ 217 (329)
T PTZ00263 195 AVDW-WTMGVLLYEFIAGYPPFFD 217 (329)
T ss_pred ccee-echHHHHHHHHcCCCCCCC
Confidence 7899 9999999999 6788864
No 42
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.95 E-value=2.2e-27 Score=236.77 Aligned_cols=174 Identities=17% Similarity=0.284 Sum_probs=144.8
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||+|++.+... .......+.+|+.+++.++||||+++++.+...+.+|+||||+++++|..++...+.+++..+
T Consensus 18 ~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~ 97 (328)
T cd05593 18 ASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRT 97 (328)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHH
Confidence 4789999999976543 234456788999999999999999999999999999999999999999999988788999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
+.++.||+.||.|||++||+||||||+|||++.+. .+.++|||++....... ....+..+++.|+|||...+. .
T Consensus 98 ~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~-~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ 174 (328)
T cd05593 98 RFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG-HIKITDFGLCKEGITDA--ATMKTFCGTPEYLAPEVLEDNDYGR 174 (328)
T ss_pred HHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC-cEEEecCcCCccCCCcc--cccccccCCcCccChhhhcCCCCCc
Confidence 99999999999999999999999999999997642 34445999875432211 111234578899999998765 7
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|+++|++ +..||..
T Consensus 175 ~~Di-wslGvil~elltG~~Pf~~ 197 (328)
T cd05593 175 AVDW-WGLGVVMYEMMCGRLPFYN 197 (328)
T ss_pred cCCc-cccchHHHHHhhCCCCCCC
Confidence 7899 9999999999 6788864
No 43
>KOG0033|consensus
Probab=99.95 E-value=3.8e-29 Score=225.47 Aligned_cols=174 Identities=22% Similarity=0.354 Sum_probs=153.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++|+.+|+|+++....+....+++.+|+.|.+.|+||||+++.+...+....|||+|++.|++|..-+-....+++..+-
T Consensus 34 ~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aS 113 (355)
T KOG0033|consen 34 TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 113 (355)
T ss_pred cchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHH
Confidence 58899999999988888778899999999999999999999999999999999999999999999887666678999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeec--cCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIK--NNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~--~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
.+++||+++|.|+|.+||||||+||+|+++. ++...+.+++||++....+.. .-...+|+|.|++||+....
T Consensus 114 H~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~ 190 (355)
T KOG0033|consen 114 HCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE---AWHGFAGTPGYLSPEVLKKDPYS 190 (355)
T ss_pred HHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc---ccccccCCCcccCHHHhhcCCCC
Confidence 9999999999999999999999999999994 345566677999987654221 22457899999999998876
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |+.|+++|-+ |++||.+
T Consensus 191 kpvDi-W~cGViLfiLL~G~~PF~~ 214 (355)
T KOG0033|consen 191 KPVDI-WACGVILYILLVGYPPFWD 214 (355)
T ss_pred Ccchh-hhhhHHHHHHHhCCCCCCC
Confidence 67899 9999999877 9999997
No 44
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.95 E-value=1.1e-27 Score=243.52 Aligned_cols=176 Identities=22% Similarity=0.337 Sum_probs=143.6
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||||++.+... .....+.+.+|+.+++.++||||+++++++.+.+.+|+||||++||+|.+++...+.+++..+
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~ 103 (377)
T cd05629 24 DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVT 103 (377)
T ss_pred CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence 4788999999876533 233456788999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCC-------------ccc------------
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGS-------------AYI------------ 135 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs-------------~~~------------ 135 (477)
+.++.|++.||+|||++||+||||||+|||++.++ .+.++|||++...... ...
T Consensus 104 ~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~-~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (377)
T cd05629 104 RFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG-HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVD 182 (377)
T ss_pred HHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC-CEEEeecccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999997643 3444599987421100 000
Q ss_pred --------------------ccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 136 --------------------EQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 136 --------------------~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
....+.++++.|+|||+..+. .++|+ ||+|+++||+ |..||.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 183 SINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDW-WSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred cccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceee-EecchhhhhhhcCCCCCCC
Confidence 000124678899999998765 67899 9999999999 7788864
No 45
>KOG0586|consensus
Probab=99.95 E-value=1.3e-27 Score=240.83 Aligned_cols=174 Identities=29% Similarity=0.436 Sum_probs=157.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.++..||||.+.+...+....+.+.+|+++|+.|+||||++++.+.+.+..+|+||||+.+|.+++|+.+++++.+..++
T Consensus 79 ~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar 158 (596)
T KOG0586|consen 79 LTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEAR 158 (596)
T ss_pred CCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhh
Confidence 57899999999999888877778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCc-ceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~-~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
.++.|++.|++|+|+++|+|||||++||||+.+. +++. |||.+...+-. ..-.|..+++.|.|||++.+.
T Consensus 159 ~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIa--DfgfS~~~~~~---~~lqt~cgsppyAaPEl~~g~~y~g 233 (596)
T KOG0586|consen 159 AKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIA--DFGFSTFFDYG---LMLQTFCGSPPYAAPELFNGKKYDG 233 (596)
T ss_pred hhhHHHHHHHHHHhhcceeccccchhhcccccccceeee--ccccceeeccc---ccccccCCCCCccChHhhcCcccCC
Confidence 9999999999999999999999999999999874 5554 88887665532 234578899999999999987
Q ss_pred CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
+.+|+ |++|+++|.+ +..||.+..
T Consensus 234 pe~D~-Wslgvvly~LV~GsLPFDG~~ 259 (596)
T KOG0586|consen 234 PEVDI-WSLGVVLYALVEGSLPFDGQN 259 (596)
T ss_pred cceeh-hhhhhhheeeeecccccCCcc
Confidence 78999 9999999999 889999764
No 46
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.95 E-value=1.3e-27 Score=236.67 Aligned_cols=174 Identities=21% Similarity=0.327 Sum_probs=145.0
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|++++... .......+.+|+.++++++||||+++++++..++..|+||||++|++|.+++...+++++..+
T Consensus 16 ~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~ 95 (312)
T cd05585 16 DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRA 95 (312)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHH
Confidence 4688999999876432 234456788999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++||+||||||+||+++.+. .+.++|||++....... ....+..+++.|+|||...+. .
T Consensus 96 ~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~-~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ 172 (312)
T cd05585 96 RFYTAELLCALENLHKFNVIYRDLKPENILLDYQG-HIALCDFGLCKLNMKDD--DKTNTFCGTPEYLAPELLLGHGYTK 172 (312)
T ss_pred HHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC-cEEEEECcccccCccCC--CccccccCCcccCCHHHHcCCCCCC
Confidence 99999999999999999999999999999997643 34445999876422111 112345678899999998765 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|+++|++ +..||.+
T Consensus 173 ~~Dv-wslGvil~el~tg~~pf~~ 195 (312)
T cd05585 173 AVDW-WTLGVLLYEMLTGLPPFYD 195 (312)
T ss_pred ccce-echhHHHHHHHhCCCCcCC
Confidence 7899 9999999999 7788864
No 47
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.94 E-value=3e-27 Score=240.24 Aligned_cols=177 Identities=20% Similarity=0.304 Sum_probs=143.6
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|++.+... .....+.+.+|+.+|++++||||+++++.+.+++.+|+||||++||+|.+++.+.+.+++..+
T Consensus 24 ~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~ 103 (376)
T cd05598 24 DTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLA 103 (376)
T ss_pred CCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence 4689999999865432 223346688999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCC---ccc----------------------
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGS---AYI---------------------- 135 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs---~~~---------------------- 135 (477)
+.++.||+.||.|||++||+||||||+|||++.+. .+.++|||++...... .+.
T Consensus 104 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~-~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (376)
T cd05598 104 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG-HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDR 182 (376)
T ss_pred HHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC-CEEEEeCCCCcccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999997643 3444699986421100 000
Q ss_pred ----------------ccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeeccccc
Q psy6508 136 ----------------EQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 136 ----------------~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
....+.++++.|+|||+..+. .++|+ ||+|+++||| |..||.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 183 CRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW-WSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred ccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceee-eeccceeeehhhCCCCCCCC
Confidence 001124678899999998765 67899 9999999999 77888753
No 48
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.94 E-value=1.3e-27 Score=241.66 Aligned_cols=176 Identities=20% Similarity=0.351 Sum_probs=144.6
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||||++.+... .......+.+|+.+++.++||||+++++++..++.+|+||||++||+|.+++...+.+++..+
T Consensus 24 ~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~ 103 (364)
T cd05599 24 DTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEET 103 (364)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHH
Confidence 4688999999976533 233446688999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc----c---------------------
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY----I--------------------- 135 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~----~--------------------- 135 (477)
+.++.|++.||+|||++||+||||||+|||++.+. .+.++|||++........ .
T Consensus 104 ~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (364)
T cd05599 104 RFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG-HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSK 182 (364)
T ss_pred HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC-CEEEeecccceecccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999997653 334459998754221100 0
Q ss_pred -----------ccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 136 -----------EQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 136 -----------~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
....+.++|+.|+|||+..+. .++|+ ||+|+++||| |..||.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlG~il~el~~G~~Pf~~ 241 (364)
T cd05599 183 RKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDW-WSLGVIMYEMLVGYPPFCS 241 (364)
T ss_pred ccccchhhcccccccccccCccccCHHHHcCCCCCCeeee-ecchhHHHHhhcCCCCCCC
Confidence 011134688999999988665 67899 9999999999 7788865
No 49
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.94 E-value=2.2e-27 Score=236.22 Aligned_cols=174 Identities=16% Similarity=0.283 Sum_probs=144.1
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||+|+++.... .......+.+|+.+++.++||||+++++++...+.+|+||||++|++|..++...+.+++..+
T Consensus 18 ~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~ 97 (323)
T cd05595 18 ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA 97 (323)
T ss_pred CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence 4789999999876533 233456778999999999999999999999999999999999999999999988788999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
+.++.|++.||.|||++||+||||||+|||++.+. .+.++|||++....... ....+..++..|+|||...+. .
T Consensus 98 ~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ 174 (323)
T cd05595 98 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGR 174 (323)
T ss_pred HHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC-CEEecccHHhccccCCC--CccccccCCcCcCCcccccCCCCCc
Confidence 99999999999999999999999999999997643 34446999875422111 111234577889999998765 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|+++||+ +..||.+
T Consensus 175 ~~Di-wSlGvil~ell~g~~Pf~~ 197 (323)
T cd05595 175 AVDW-WGLGVVMYEMMCGRLPFYN 197 (323)
T ss_pred hhch-hhhHHHHHHHHhCCCCCCC
Confidence 7899 9999999999 6678864
No 50
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.94 E-value=3.1e-27 Score=235.13 Aligned_cols=174 Identities=21% Similarity=0.325 Sum_probs=143.9
Q ss_pred CCCcEEEEEEcccCCC--ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV--SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
++++.||+|++++... .......+.+|+.+|+.++||||+++++.+..++.+|+||||++|++|.+++.+.+.+++..
T Consensus 22 ~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 101 (323)
T cd05584 22 DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDT 101 (323)
T ss_pred CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHH
Confidence 4688999999876432 22334567899999999999999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++||+||||||+|||++.+. ++.++|||++........ ...+..+++.|+|||...+.
T Consensus 102 ~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 178 (323)
T cd05584 102 ACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG-HVKLTDFGLCKESIHEGT--VTHTFCGTIEYMAPEILMRSGHG 178 (323)
T ss_pred HHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-CEEEeeCcCCeecccCCC--cccccCCCccccChhhccCCCCC
Confidence 999999999999999999999999999999997643 344459998764322111 12234578899999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++||+ +..||..
T Consensus 179 ~~~Di-wslG~il~ell~G~~pf~~ 202 (323)
T cd05584 179 KAVDW-WSLGALMYDMLTGAPPFTA 202 (323)
T ss_pred Cccee-cccHHHHHHHhcCCCCCCC
Confidence 67899 9999999999 6788865
No 51
>TIGR02696 pppGpp_PNP guanosine pentaphosphate synthetase I/polynucleotide phosphorylase. Sohlberg, et al. present characterization of two proteins from Streptomyces coelicolor. The protein in this family was shown to have poly(A) polymerase activity and may be responsible for polyadenylating RNA in this species. Reference 2 showed that a nearly identical plasmid-encoded protein from Streptomyces antibioticus is a bifunctional enzyme that acts also as a guanosine pentaphosphate synthetase.
Probab=99.94 E-value=2.1e-26 Score=241.03 Aligned_cols=274 Identities=16% Similarity=0.195 Sum_probs=212.4
Q ss_pred CCCCceeec---cCcceeecccccceecccCCcccccCCeEEEeccc-cccccCCCCCcccccCcceEEEEEEeeecccc
Q psy6508 104 LKPQNILIK---NNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVF-EPREIPSSKTSLEYQRSKGELYVEFKFAPFAS 179 (477)
Q Consensus 104 lkp~NIll~---~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y-~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~ 179 (477)
+-.+++.+| .+++|.+.+.+|+...++||++++.|+|++.+++. +|++.........- -..+.+++++.++||+.
T Consensus 330 il~~g~R~DGR~~~eiR~i~~~~g~l~~a~GSa~~~~G~Tqvl~~~tlG~~~~~q~~~~l~~-~~~~~~~~~YnfpPFSt 408 (719)
T TIGR02696 330 VLTEGVRIDGRGVTDIRPLDAEVQVIPRVHGSALFERGETQILGVTTLNMLKMEQQIDSLSP-ETSKRYMHHYNFPPYST 408 (719)
T ss_pred HhcCCCCCCCCCccccccceeecCCCCCCCceEEEEecCcEEEEEEeCCCchhhhhcccccc-cccceEEEEEeCCCCcc
Confidence 334444454 36899999999999999999999999999999854 44332221100011 23578889999999998
Q ss_pred ccccCC-CCCcchHHHHHHHHHHhhhhhh-cccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEEEEEE
Q psy6508 180 QIRTGW-LRDSEEKELGNHLKRALEPAVC-RHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTL 257 (477)
Q Consensus 180 ~~r~~~-~~~~~~~~l~~~i~~~l~~~i~-~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~a~s~ 257 (477)
..++.. .+++++.+...++++++++.+. ++.||++ |.+..++|++|||..+|++||++|||+||||||+++|+|||+
T Consensus 409 ~er~~~~~~~RReighg~La~rALe~vI~~~e~fP~T-IrvvseVLeSdGSss~AsIcaasLALmDAGVPmkd~VAgis~ 487 (719)
T TIGR02696 409 GETGRVGSPKRREIGHGALAERALVPVLPSREEFPYA-IRQVSEALGSNGSTSMGSVCASTLSLLNAGVPLKAPVAGIAM 487 (719)
T ss_pred cCCCCCCCCCccHHHHHHHHHHHHHHhhCcHhhCCCE-EEEEEEeeccCCcHHHHHHHHHHHHHHHcCcchhheeeEEEE
Confidence 776654 4577899999999999999996 6999998 788889999999999999999999999999999999999999
Q ss_pred EeeC----Ce----EEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEeee---cHHHHHHHHHHHHhcc
Q psy6508 258 ALRG----GL----TFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTI---QQERLADHIEQLIGCC 326 (477)
Q Consensus 258 ~~~~----~~----~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~~---~~~~~~~~l~~~~~~~ 326 (477)
++.+ +. +++||+..|+.. +.+.+.+.+..++|+.++++|++ +.+.+.++|+.|++||
T Consensus 488 Gli~e~~~~~~~~~iL~Di~g~ED~~------------Gdmdfkvagt~~gIt~lQmd~ki~gi~~e~l~~aL~~A~~g~ 555 (719)
T TIGR02696 488 GLISDEVDGETRYVALTDILGAEDAF------------GDMDFKVAGTSEFVTALQLDTKLDGIPASVLASALKQARDAR 555 (719)
T ss_pred EEeccccCCCcceeEEeCCCchhhhc------------CCceEEEEecCCCEEEEEEEeeECCCCHHHHHHHHHHHHHHH
Confidence 9983 33 899999999883 56777777888999999999997 8899999999999999
Q ss_pred cchhhHHHHhHhhhccc-cch-------------hhHH--------hhhcCcceeEEEEecCccceeeEeeeehhhhccc
Q psy6508 327 ESLCTDRVQKLVSDHVT-LPE-------------RGRY--------VLNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSS 384 (477)
Q Consensus 327 ~~i~~~~i~~~l~~~~~-l~~-------------r~~~--------~~~~~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S 384 (477)
..+... |++++... . +.. +-.. .+.=-.-|.+.|-+++++.+..+-..+.-+...-
T Consensus 556 ~~Il~~-m~~al~~p-~~~s~~aP~~~~~~I~~~ki~~vIG~gGk~I~~i~~~tg~~Idi~d~G~V~I~a~d~~~~~~A~ 633 (719)
T TIGR02696 556 LAILDV-MAEAIDTP-DEMSPYAPRIITVKIPVDKIGEVIGPKGKMINQIQDETGAEISIEDDGTVYIGAADGPSAEAAR 633 (719)
T ss_pred HHHHHH-HHHHHhCc-cccccCCCeeEEEEeChHHhhheeCCCcHhHHHHHHHHCCEEEEecCcEEEEEeCCHHHHHHHH
Confidence 999999 99999887 4 111 1111 1111245577777776555544555555555555
Q ss_pred HHHHHhcCC
Q psy6508 385 PVFATMFHG 393 (477)
Q Consensus 385 ~~f~~~f~~ 393 (477)
.+-..+...
T Consensus 634 ~~I~~i~~~ 642 (719)
T TIGR02696 634 AMINAIANP 642 (719)
T ss_pred HHHHHhhCc
Confidence 666666553
No 52
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.94 E-value=4.2e-27 Score=237.80 Aligned_cols=176 Identities=22% Similarity=0.339 Sum_probs=144.5
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
++++.||+|+++.... .....+.+.+|+.++..++||||+++++.+...+.+|+||||++||+|.+++.+.+.+++..+
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~ 103 (360)
T cd05627 24 DTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEAT 103 (360)
T ss_pred CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHH
Confidence 4788999999975432 233456788999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc--------------------------
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY-------------------------- 134 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~-------------------------- 134 (477)
+.++.|++.||.|||++||+||||||+|||++.++ .+.++|||++........
T Consensus 104 ~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~-~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (360)
T cd05627 104 QFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG-HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKA 182 (360)
T ss_pred HHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC-CEEEeeccCCcccccccccccccccccCCccccccccccccccc
Confidence 99999999999999999999999999999997643 344569998754321100
Q ss_pred -------cccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 135 -------IEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 135 -------~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.....+.++++.|+|||+..+. .++|+ ||+|+++||| |..||.+
T Consensus 183 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~Di-wSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 183 ETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDW-WSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred ccccccccccccccCCCccccCHHHHcCCCCCCccee-ccccceeeecccCCCCCCC
Confidence 0001134688899999998765 67899 9999999999 6678864
No 53
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.94 E-value=9.4e-28 Score=242.81 Aligned_cols=176 Identities=21% Similarity=0.328 Sum_probs=145.2
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||||++++... .......+.+|+.++++++||||+++++.+.+...+|+||||++||+|.+++.+.+.+++..+
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~ 103 (363)
T cd05628 24 DTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEET 103 (363)
T ss_pred CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHH
Confidence 4688999999976533 233446788999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc--------------------------
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY-------------------------- 134 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~-------------------------- 134 (477)
+.++.|++.||+|||++||+||||||+|||++.+. .+.++|||++........
T Consensus 104 ~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~-~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (363)
T cd05628 104 QFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG-HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKA 182 (363)
T ss_pred HHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC-CEEEeeccCccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999997643 344569998754321100
Q ss_pred -------cccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 135 -------IEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 135 -------~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.....+.++++.|+|||++.+. .++|+ ||+|+++||| |..||.+
T Consensus 183 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~Dv-wSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 183 ETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDW-WSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred chhhhccccccccccCCccccCHHHHcCCCCCCchhh-hhhHHHHHHHHhCCCCCCC
Confidence 0001235788899999998665 67899 9999999999 7788864
No 54
>KOG0694|consensus
Probab=99.94 E-value=3.3e-28 Score=247.70 Aligned_cols=172 Identities=24% Similarity=0.438 Sum_probs=149.0
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||||++++..+ ..+..+..+.|.+|+... +||+++.++..|+.++++|+||||+.||++..+.+ .+.+++..
T Consensus 391 ~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~-~~~F~e~r 469 (694)
T KOG0694|consen 391 GTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIH-TDVFSEPR 469 (694)
T ss_pred CCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEe-cccccHHH
Confidence 5788999999999876 456678899999999888 59999999999999999999999999999655443 36899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
++.++..++.||+|||++||+|||||.+|||+|.+ .+|+ .|||+++..-+. -....|..||+-|++||++.+.
T Consensus 470 arfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~ki--ADFGlcKe~m~~--g~~TsTfCGTpey~aPEil~e~~Y 545 (694)
T KOG0694|consen 470 ARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKI--ADFGLCKEGMGQ--GDRTSTFCGTPEFLAPEVLTEQSY 545 (694)
T ss_pred HHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEe--cccccccccCCC--CCccccccCChhhcChhhhccCcc
Confidence 99999999999999999999999999999999875 4555 599999754322 2244688999999999999988
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++||| |..||.+
T Consensus 546 t~aVDW-W~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 546 TRAVDW-WGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred cchhhH-HHHHHHHHHHHcCCCCCCC
Confidence 88999 9999999999 7788884
No 55
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.94 E-value=7.5e-28 Score=235.99 Aligned_cols=171 Identities=25% Similarity=0.411 Sum_probs=144.4
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||+|++...... ....+.+.+|+.++++++||||+++++++.+++.+|+||||+++++|.+++...+.+++..+
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 103 (291)
T cd05612 24 ISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTG 103 (291)
T ss_pred CCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHH
Confidence 46899999998765332 23456788999999999999999999999999999999999999999999998888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||+|||++|++||||||+|||++.++ ++.++|||.+...... ..+..+++.|+|||...+. .
T Consensus 104 ~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~-~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~ 177 (291)
T cd05612 104 LFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG-HIKLTDFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNK 177 (291)
T ss_pred HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC-CEEEEecCcchhccCC-----cccccCChhhcCHHHHcCCCCCc
Confidence 99999999999999999999999999999997643 3445599987654332 1245678889999988765 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|+++|++ +..||.+
T Consensus 178 ~~Di-wSlG~il~~l~~g~~pf~~ 200 (291)
T cd05612 178 AVDW-WALGILIYEMLVGYPPFFD 200 (291)
T ss_pred hhhH-HHHHHHHHHHHhCCCCCCC
Confidence 7899 9999999999 6677764
No 56
>KOG0032|consensus
Probab=99.94 E-value=1.6e-27 Score=239.32 Aligned_cols=175 Identities=27% Similarity=0.420 Sum_probs=153.0
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+|+.||+|++++..... ...+.+.+|+.+|+++. ||||+.+++.|++...+++|||+|.||.|.+.+... .+++..
T Consensus 58 ~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~d 136 (382)
T KOG0032|consen 58 STGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERD 136 (382)
T ss_pred CCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHH
Confidence 469999999998887643 34578999999999997 999999999999999999999999999999999876 499999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC---cceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN---TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~---~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
+..++.|++.+++|||+.|++||||||+|+|+... ..++..+|||++....+. ....+.+|++.|.|||+....
T Consensus 137 a~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~---~~~~~~~Gtp~y~APEvl~~~ 213 (382)
T KOG0032|consen 137 AAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG---ERLHTIVGTPEYVAPEVLGGR 213 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC---ceEeeecCCccccCchhhcCC
Confidence 99999999999999999999999999999999542 346777799999876652 234578999999999999854
Q ss_pred ---CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
..+|+ ||+|+++|.| |++||.+..
T Consensus 214 ~y~~~~Di-WS~Gvi~yiLL~G~~PF~~~~ 242 (382)
T KOG0032|consen 214 PYGDEVDV-WSIGVILYILLSGVPPFWGET 242 (382)
T ss_pred CCCcccch-hHHHHHHHHHhhCCCCCcCCC
Confidence 78899 9999999999 888998643
No 57
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.94 E-value=3.1e-27 Score=236.16 Aligned_cols=171 Identities=26% Similarity=0.406 Sum_probs=145.3
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||||++++.... ....+.+.+|+.+++.++||||+++++++...+..|+||||++|++|.+++...+.+++..+
T Consensus 24 ~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~ 103 (333)
T cd05600 24 DTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHA 103 (333)
T ss_pred CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHH
Confidence 46889999999765432 23446788999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
+.++.|++.||.|||++||+||||||+||+++.+. .+.++|||.+..... ...+..+++.|+|||...+. .
T Consensus 104 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 177 (333)
T cd05600 104 RFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG-HIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDF 177 (333)
T ss_pred HHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC-CEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCC
Confidence 99999999999999999999999999999997643 344459998765433 22455678899999998765 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|+++||| +..||..
T Consensus 178 ~~Dv-wslG~il~ell~g~~pf~~ 200 (333)
T cd05600 178 TVDY-WSLGCMLYEFLCGFPPFSG 200 (333)
T ss_pred ccce-ecchHHHhhhhhCCCCCCC
Confidence 7899 9999999999 6678764
No 58
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.94 E-value=2.7e-27 Score=240.99 Aligned_cols=176 Identities=23% Similarity=0.354 Sum_probs=145.1
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
++++.||||++++... .....+.+.+|+.+++.++||||+++++++.+.+.+|+||||++||+|.+++.+.+.+++..+
T Consensus 24 ~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~ 103 (381)
T cd05626 24 DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLA 103 (381)
T ss_pred CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHH
Confidence 5788999999976543 334456789999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccC---Cccc----------------------
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKG---SAYI---------------------- 135 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~g---s~~~---------------------- 135 (477)
+.++.|++.||.|||++||+||||||+|||++.++ ++.+.|||++..... +.+.
T Consensus 104 ~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~-~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (381)
T cd05626 104 RFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG-HIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSN 182 (381)
T ss_pred HHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC-CEEEeeCcCCcccccccccccccccccccccccCcccccccccc
Confidence 99999999999999999999999999999997643 344569998642210 0000
Q ss_pred --------------------ccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 136 --------------------EQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 136 --------------------~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
....+.+++..|+|||.+.+. .++|+ ||+|+++||| +..||..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di-wSlG~il~elltG~~Pf~~ 250 (381)
T cd05626 183 CRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDW-WSVGVILFEMLVGQPPFLA 250 (381)
T ss_pred cccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccce-eehhhHHHHHHhCCCCCcC
Confidence 001234688899999998655 67899 9999999999 7788864
No 59
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.94 E-value=6e-27 Score=235.46 Aligned_cols=175 Identities=26% Similarity=0.399 Sum_probs=146.6
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||||++++..... .....+.+|+.+++.++||||+++++++.+++..|+||||++|++|.+++.+.+.+++..+
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~ 103 (350)
T cd05573 24 DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETA 103 (350)
T ss_pred CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHH
Confidence 468999999997654322 4456788999999999999999999999999999999999999999999988788999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCc--------------------------
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSA-------------------------- 133 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~-------------------------- 133 (477)
+.++.|++.||.|||++||+||||||+|||++.+ .+++ +|||.+.......
T Consensus 104 ~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL--~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (350)
T cd05573 104 RFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKL--ADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHK 181 (350)
T ss_pred HHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEe--ecCCCCccCcccCcccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999764 4444 5999876443221
Q ss_pred -ccccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 134 -YIEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 134 -~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
......+..+++.|+|||...+. .++|+ ||+|+++||+ +..||..
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 182 QRRVRANSTVGTPDYIAPEVLRGTPYGLECDW-WSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred cccccccccccCccccCHHHHcCCCCCCceee-EecchhhhhhccCCCCCCC
Confidence 01122346788899999998766 67899 9999999999 6678864
No 60
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.94 E-value=1.9e-26 Score=229.49 Aligned_cols=174 Identities=20% Similarity=0.342 Sum_probs=140.3
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHH-HHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIK-ALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+|+.||||++.+.... ......+.+|.. +++.++||||+++++.+...+..|+||||++|++|..++...+.+++..
T Consensus 18 ~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~ 97 (323)
T cd05575 18 ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPR 97 (323)
T ss_pred CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHH
Confidence 47899999998765332 222344555655 5678999999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
++.++.||+.||.|||++||+||||||+|||++.+. .+.++|||++....... .......++..|+|||...+.
T Consensus 98 ~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~-~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (323)
T cd05575 98 ARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG-HVVLTDFGLCKEGIEHS--KTTSTFCGTPEYLAPEVLRKQPYD 174 (323)
T ss_pred HHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC-cEEEeccCCCcccccCC--CccccccCChhhcChhhhcCCCCC
Confidence 999999999999999999999999999999997653 34445999875422111 112234678899999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 175 ~~~Dv-wslG~il~ell~g~~pf~~ 198 (323)
T cd05575 175 RTVDW-WCLGAVLYEMLYGLPPFYS 198 (323)
T ss_pred ccccc-cccchhhhhhhcCCCCCCC
Confidence 67899 9999999999 6688865
No 61
>KOG0607|consensus
Probab=99.94 E-value=3.5e-28 Score=226.70 Aligned_cols=176 Identities=25% Similarity=0.426 Sum_probs=146.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|.+||||++.+. ....+.++.+|++++.+. .|+||++++++|+++..+|||||-+.||+|.+.++++..+++.++
T Consensus 101 ~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EA 178 (463)
T KOG0607|consen 101 QTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREA 178 (463)
T ss_pred ccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHH
Confidence 47899999999876 344567899999999999 599999999999999999999999999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-C---cceeecccccceecccCCcc---cccCCeEEEeccccccccC
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-N---TLKLAGLKQGVSEKAKGSAY---IEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~---~~rl~~~dfG~~~~~~gs~~---~~~g~t~v~~~~y~ppE~~ 153 (477)
.++..+|+.||.|||.+||.||||||+|||-.+ | .+++.++|+|.-.+..+... ...-.|.+|...||+||+.
T Consensus 179 s~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVV 258 (463)
T KOG0607|consen 179 SRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVV 258 (463)
T ss_pred HHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHH
Confidence 999999999999999999999999999999954 3 45666666665433333221 1122366777789999975
Q ss_pred CC---C-----CcccccCcceEEEEEE--eeeccccc
Q psy6508 154 SS---K-----TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 154 ~~---~-----~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.- . ...|. ||+|+++|-| ||+||.+.
T Consensus 259 d~fv~qA~~YDKrCDl-wSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 259 DVFVDQATFYDKRCDL-WSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred hhhccccccccccccH-HHHHHHHHHHHhCCCCccCc
Confidence 42 2 56799 9999999998 99999874
No 62
>KOG0580|consensus
Probab=99.94 E-value=3.9e-28 Score=218.55 Aligned_cols=172 Identities=27% Similarity=0.435 Sum_probs=150.5
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHH--hCCCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIR--SHEKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~--~~~~l~~~ 78 (477)
+++..||+|++.++.+.. ...+++.+|++|-..|+||||+++|++|.++..+|+++||..+|+|...|+ ...++++.
T Consensus 45 ks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~ 124 (281)
T KOG0580|consen 45 KSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQ 124 (281)
T ss_pred cCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhccccccccc
Confidence 578889999998876543 334679999999999999999999999999999999999999999999999 55679999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
....+++|++.||.|+|.++++||||||+|+|++. +++++. |||.+.....+ .-.|-.+|.-|.|||+..+.
T Consensus 125 ~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiA--dfGwsV~~p~~----kR~tlcgt~dyl~pEmv~~~~ 198 (281)
T KOG0580|consen 125 RAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIA--DFGWSVHAPSN----KRKTLCGTLDYLPPEMVEGRG 198 (281)
T ss_pred chhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeecc--CCCceeecCCC----CceeeecccccCCHhhcCCCC
Confidence 99999999999999999999999999999999975 566655 99998776532 22567778889999999887
Q ss_pred --CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
..+|+ |++|++.||+ +.+||.+.
T Consensus 199 hd~~Vd~-w~lgvl~yeflvg~ppFes~ 225 (281)
T KOG0580|consen 199 HDKFVDL-WSLGVLCYEFLVGLPPFESQ 225 (281)
T ss_pred ccchhhH-HHHHHHHHHHHhcCCchhhh
Confidence 77999 9999999998 88999864
No 63
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.94 E-value=3.2e-26 Score=228.52 Aligned_cols=174 Identities=22% Similarity=0.359 Sum_probs=140.7
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhc---CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLL---HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l---~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~ 77 (477)
.+|+.||+|++.+.... ......+.+|..++... +||||+++++.+...+.+|+||||++|++|..++.+.+.+++
T Consensus 16 ~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~ 95 (330)
T cd05586 16 DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSE 95 (330)
T ss_pred CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCH
Confidence 46899999998754332 22334566677777765 699999999999999999999999999999999988888999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
..++.++.||+.||.|||++||+||||||+|||++.+. ++.++|||++....... ....+..++..|+|||.+.+.
T Consensus 96 ~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~-~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~ 172 (330)
T cd05586 96 DRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG-HIALCDFGLSKANLTDN--KTTNTFCGTTEYLAPEVLLDEK 172 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC-CEEEecCCcCcCCCCCC--CCccCccCCccccCHHHHcCCC
Confidence 99999999999999999999999999999999997653 34456999875422111 122345678899999987543
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|+| +..||.+
T Consensus 173 ~~~~~~Dv-wslGvil~elltG~~Pf~~ 199 (330)
T cd05586 173 GYTKHVDF-WSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred CCCCccce-eccccEEEEeccCCCCCCC
Confidence 67899 9999999999 6788865
No 64
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.94 E-value=4e-27 Score=239.90 Aligned_cols=176 Identities=20% Similarity=0.306 Sum_probs=143.8
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|++.+... .....+.+.+|+.++++++||||+++++.+.+++.+|+||||++||+|.+++.+.+.+++..+
T Consensus 24 ~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~ 103 (382)
T cd05625 24 DTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLA 103 (382)
T ss_pred CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence 4688999999876533 233456788999999999999999999999999999999999999999999988778999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccC---Cccc----------------------
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKG---SAYI---------------------- 135 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~g---s~~~---------------------- 135 (477)
+.++.|++.||+|||++||+||||||+|||++.++ .+.++|||++..... +.+.
T Consensus 104 ~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g-~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (382)
T cd05625 104 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG-HIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182 (382)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-CEEEeECCCCcccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999997643 344459998642110 0000
Q ss_pred --------------------ccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 136 --------------------EQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 136 --------------------~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
....+.++++.|+|||+..+. .++|+ ||+|+++||| +..||.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di-wSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW-WSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred ccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeE-EechHHHHHHHhCCCCCCC
Confidence 001234678899999998765 77899 9999999999 7788875
No 65
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94 E-value=2e-26 Score=229.10 Aligned_cols=174 Identities=21% Similarity=0.344 Sum_probs=140.1
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHH-HHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIK-ALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+|+.||+|++.+.... ......+.+|.. +++.++||||+++++.+...+..|+||||++|++|..++.....+++..
T Consensus 18 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 97 (321)
T cd05603 18 SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPR 97 (321)
T ss_pred CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHH
Confidence 46889999998765432 223345556654 5788999999999999999999999999999999999998877899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.||+.||.|||++||+||||||+||+++.++ ++.++|||++....... .......+++.|+|||...+.
T Consensus 98 ~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (321)
T cd05603 98 ARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG-HVVLTDFGLCKEGVEPE--ETTSTFCGTPEYLAPEVLRKEPYD 174 (321)
T ss_pred HHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC-CEEEccCCCCccCCCCC--CccccccCCcccCCHHHhcCCCCC
Confidence 999999999999999999999999999999997643 34456999875321111 112334678889999998665
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++||| +..||.+
T Consensus 175 ~~~Di-wslG~il~el~~g~~pf~~ 198 (321)
T cd05603 175 RTVDW-WCLGAVLYEMLYGLPPFYS 198 (321)
T ss_pred CcCcc-cccchhhhhhhcCCCCCCC
Confidence 67899 9999999999 6788865
No 66
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.94 E-value=2.6e-26 Score=228.67 Aligned_cols=174 Identities=20% Similarity=0.340 Sum_probs=141.2
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHH-HHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIK-ALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+|+.||+|++.+... .......+.+|.. +++.++||||+++++.+..++..|+||||++|++|..++.+.+.+++..
T Consensus 18 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 97 (325)
T cd05604 18 LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPR 97 (325)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHH
Confidence 4688999999876533 2233345666665 4677899999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.||+.||.|||++||+||||||+|||++.+. .+.++|||++....... ....+..++..|+|||...+.
T Consensus 98 ~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~-~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (325)
T cd05604 98 ARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG-HVVLTDFGLCKEGIAQS--DTTTTFCGTPEYLAPEVIRKQPYD 174 (325)
T ss_pred HHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC-CEEEeecCCcccCCCCC--CCcccccCChhhCCHHHHcCCCCC
Confidence 999999999999999999999999999999997653 34456999875432111 122345678899999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|+| +..||.+
T Consensus 175 ~~~Dv-wslG~il~el~~G~~pf~~ 198 (325)
T cd05604 175 NTVDW-WCLGAVLYEMLYGLPPFYC 198 (325)
T ss_pred CcCcc-ccccceehhhhcCCCCCCC
Confidence 67899 9999999999 6788864
No 67
>KOG4717|consensus
Probab=99.94 E-value=5.1e-27 Score=230.69 Aligned_cols=173 Identities=29% Similarity=0.453 Sum_probs=151.1
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~ 81 (477)
+|..||||++.+.+...-....+..|++.|+-++|||||++|.+......+|||+|+-+||+|++|+-++. .+.+..++
T Consensus 42 TGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~ 121 (864)
T KOG4717|consen 42 TGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAK 121 (864)
T ss_pred ccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHH
Confidence 68999999999998877666778999999999999999999999999999999999999999999997764 69999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeecc--CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKN--NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~--~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+++.||+.|+.|+|+..+|||||||+|+.+-. +-+++. |||++...... +.-+|..|...|.+||++.+.
T Consensus 122 kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLT--DFGFSNkf~PG---~kL~TsCGSLAYSAPEILLGDsYD 196 (864)
T KOG4717|consen 122 KYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLT--DFGFSNKFQPG---KKLTTSCGSLAYSAPEILLGDSYD 196 (864)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEee--eccccccCCCc---chhhcccchhhccCchhhhcCccC
Confidence 99999999999999999999999999998854 455555 99987544322 223577888899999999987
Q ss_pred -CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
+++|| ||+|+|+|-+ |.+||...+
T Consensus 197 APAVDi-WSLGVILyMLVCGq~PFqeAN 223 (864)
T KOG4717|consen 197 APAVDI-WSLGVILYMLVCGQPPFQEAN 223 (864)
T ss_pred Ccchhh-hHHHHHHHHHHhCCCcccccc
Confidence 88999 9999999887 889997643
No 68
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.94 E-value=9e-27 Score=231.15 Aligned_cols=174 Identities=21% Similarity=0.362 Sum_probs=141.8
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||+|++++.... ....+.+..|..++..+ +||||+++++++..++.+|+||||++|++|.+++...+.+++..
T Consensus 18 ~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~ 97 (316)
T cd05592 18 GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEAR 97 (316)
T ss_pred CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHH
Confidence 46889999999765432 23345566777777755 89999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++||+||||||+||+++.+. ++.++|||.+....... ....+..++..|+|||...+.
T Consensus 98 ~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~-~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (316)
T cd05592 98 ARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG-HIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYN 174 (316)
T ss_pred HHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC-CEEEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCC
Confidence 999999999999999999999999999999997643 34455999876432211 122345678899999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 175 ~~~Dv-wslG~il~ell~G~~Pf~~ 198 (316)
T cd05592 175 ESVDW-WSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred Ccccc-hhHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6778864
No 69
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.94 E-value=1e-26 Score=232.15 Aligned_cols=174 Identities=22% Similarity=0.359 Sum_probs=144.5
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||+|++++..... ...+.+.+|..+++.+ +||||+++++++...+.+|+||||++|++|.+++.+.+++++..
T Consensus 18 ~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~ 97 (329)
T cd05588 18 KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEH 97 (329)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHH
Confidence 468899999998764432 3446688999999999 79999999999999999999999999999999998878899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
++.++.|++.||.|||++|++||||||+||+++.+. .+.++|||++....... ....+..++..|+|||...+.
T Consensus 98 ~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~-~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (329)
T cd05588 98 ARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG-HIKLTDYGMCKEGIRPG--DTTSTFCGTPNYIAPEILRGEDYG 174 (329)
T ss_pred HHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC-CEEECcCccccccccCC--CccccccCCccccCHHHHcCCCCC
Confidence 999999999999999999999999999999997643 33445999875322111 112245678889999998766
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 175 ~~~Di-wslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 175 FSVDW-WALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred Cccce-echHHHHHHHHHCCCCccc
Confidence 67899 9999999999 7788864
No 70
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.94 E-value=3.7e-26 Score=228.00 Aligned_cols=175 Identities=21% Similarity=0.333 Sum_probs=143.3
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~ 79 (477)
.+|+.||+|++++... .....+.+.+|+.+++.++||||+++++++...+..|+||||++|++|.+++.+. +.+++..
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~ 103 (330)
T cd05601 24 ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDM 103 (330)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHH
Confidence 4788999999986543 2334567889999999999999999999999999999999999999999999876 5799999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC----
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS---- 155 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~---- 155 (477)
+..++.|++.||.|||++||+||||||+||+++.++ .+.++|||.+......... ......++..|+|||....
T Consensus 104 ~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~-~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~ 181 (330)
T cd05601 104 AQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG-HIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGD 181 (330)
T ss_pred HHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC-CEEeccCCCCeECCCCCce-eeecccCCccccCHHHhcccccc
Confidence 999999999999999999999999999999997643 3444599988654322111 1123457788999998752
Q ss_pred --C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 --K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 --~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|+++|++ +..||..
T Consensus 182 ~~~~~~~~~Di-wslG~il~el~~g~~Pf~~ 211 (330)
T cd05601 182 GKGTYGVECDW-WSLGVIAYEMIYGRSPFHE 211 (330)
T ss_pred ccCCCCCccee-ecccceeeeeccCCCCCCC
Confidence 1 67899 9999999999 6678764
No 71
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.94 E-value=3.1e-26 Score=228.77 Aligned_cols=175 Identities=21% Similarity=0.312 Sum_probs=143.0
Q ss_pred CCCcEEEEEEcccCCCC--hhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVS--ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
++++.||+|++.+.... ....+.+.+|+.+++.+ +||||+++++++..++.+|+||||++||+|.+++..++.+++.
T Consensus 26 ~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~ 105 (332)
T cd05614 26 DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSED 105 (332)
T ss_pred CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHH
Confidence 46889999998764322 23345688999999999 5999999999999999999999999999999999887889999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.++.++.|++.||.|||++||+||||||+|||++.++ ++.++|||++....... .....+..++..|+|||...+.
T Consensus 106 ~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~-~~kl~DfG~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~ 183 (332)
T cd05614 106 EVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG-HVVLTDFGLSKEFLSEE-KERTYSFCGTIEYMAPEIIRGKGG 183 (332)
T ss_pred HHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC-CEEEeeCcCCccccccC-CCccccccCCccccCHHHhcCCCC
Confidence 9999999999999999999999999999999997653 34456999875432111 1112235678899999987653
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++||+ +..||..
T Consensus 184 ~~~~~Di-wslG~il~elltg~~pf~~ 209 (332)
T cd05614 184 HGKAVDW-WSLGILIFELLTGASPFTL 209 (332)
T ss_pred CCCcccc-ccchhhhhhhhcCCCCCCC
Confidence 57899 9999999999 6788864
No 72
>KOG4236|consensus
Probab=99.94 E-value=2.2e-26 Score=226.77 Aligned_cols=174 Identities=26% Similarity=0.371 Sum_probs=149.6
Q ss_pred CCCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHH-Hh-CCCCCHH
Q psy6508 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFI-RS-HEKLSEF 78 (477)
Q Consensus 1 ~~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l-~~-~~~l~~~ 78 (477)
+++|+.||||++.+.....+....+++|+.||++++||.||.+-..|+..+.+++|||-+. |+..+++ .. .+++++.
T Consensus 586 RktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GDMLEMILSsEkgRL~er 664 (888)
T KOG4236|consen 586 RKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GDMLEMILSSEKGRLPER 664 (888)
T ss_pred cccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-chHHHHHHHhhcccchHH
Confidence 4689999999999988877777889999999999999999999999999999999999998 4555554 33 4689999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc--CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN--NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~--~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
..+.++.||+.||.|||.+||+|+||||+|||+.+ +.....+||||.++.....+ ...+.+||+.|.|||++..+
T Consensus 665 ~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks---FRrsVVGTPAYLaPEVLrnk 741 (888)
T KOG4236|consen 665 ITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS---FRRSVVGTPAYLAPEVLRNK 741 (888)
T ss_pred HHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh---hhhhhcCCccccCHHHHhhc
Confidence 99999999999999999999999999999999964 45566677999997655443 23578999999999999877
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.+.|+ ||.|+++|-- |..||..
T Consensus 742 GyNrSLDM-WSVGVIiYVsLSGTFPFNE 768 (888)
T KOG4236|consen 742 GYNRSLDM-WSVGVIIYVSLSGTFPFNE 768 (888)
T ss_pred cccccccc-eeeeEEEEEEecccccCCC
Confidence 77899 9999999876 7777763
No 73
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.94 E-value=2e-26 Score=229.14 Aligned_cols=174 Identities=23% Similarity=0.331 Sum_probs=142.9
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||+|++++... .....+.+..|..+++.+ +||||+++++++..++.+|+||||++|++|..++...+.+++..
T Consensus 18 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~ 97 (321)
T cd05591 18 GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPR 97 (321)
T ss_pred CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHH
Confidence 4678999999876533 233445678899999876 79999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++||+||||||+||+++.++ .+.++|||.+....... ....+..++..|+|||...+.
T Consensus 98 ~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~-~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (321)
T cd05591 98 SRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG-HCKLADFGMCKEGILNG--VTTTTFCGTPDYIAPEILQELEYG 174 (321)
T ss_pred HHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC-CEEEeecccceecccCC--ccccccccCccccCHHHHcCCCCC
Confidence 999999999999999999999999999999997643 33445999876432211 112345678899999988765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 175 ~~~Dv-wslG~il~el~tg~~Pf~~ 198 (321)
T cd05591 175 PSVDW-WALGVLMYEMMAGQPPFEA 198 (321)
T ss_pred Cccce-echhHHHHHHhcCCCCCCC
Confidence 67899 9999999999 6678764
No 74
>KOG0197|consensus
Probab=99.94 E-value=1.7e-26 Score=230.26 Aligned_cols=169 Identities=23% Similarity=0.345 Sum_probs=139.2
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh--CCCCCHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS--HEKLSEFQCQQ 82 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~--~~~l~~~~~~~ 82 (477)
..||+|.++....+. +.|.+|+++|++|+|+|||++++++..+..+||||||++.|+|.++|+. ...+.......
T Consensus 231 ~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~ 307 (468)
T KOG0197|consen 231 TKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLD 307 (468)
T ss_pred CcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHH
Confidence 479999987765443 4678999999999999999999999998899999999999999999987 34799999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Ccc
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSL 159 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~ 159 (477)
++.||++|++||.++++|||||...|||++++. ...+.|||+++......|......+ .--.|.|||.+... .++
T Consensus 308 ~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~-~vKIsDFGLAr~~~d~~Y~~~~~~k-fPIkWtAPEa~~~~~FS~kS 385 (468)
T KOG0197|consen 308 FAAQIAEGMAYLESKNYIHRDLAARNILVDEDL-VVKISDFGLARLIGDDEYTASEGGK-FPIKWTAPEALNYGKFSSKS 385 (468)
T ss_pred HHHHHHHHHHHHHhCCccchhhhhhheeeccCc-eEEEcccccccccCCCceeecCCCC-CCceecCHHHHhhCCccccc
Confidence 999999999999999999999999999998764 3444699999854444443222222 22238889988765 789
Q ss_pred cccCcceEEEEEE---eeecccc
Q psy6508 160 EYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 160 Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|+ ||+|++++|+ |..||.+
T Consensus 386 DV-WSFGVlL~E~fT~G~~py~~ 407 (468)
T KOG0197|consen 386 DV-WSFGVLLWELFTYGRVPYPG 407 (468)
T ss_pred ce-eehhhhHHHHhccCCCCCCC
Confidence 99 9999999999 4566554
No 75
>KOG0599|consensus
Probab=99.94 E-value=1.3e-27 Score=218.59 Aligned_cols=171 Identities=24% Similarity=0.382 Sum_probs=144.3
Q ss_pred CCCcEEEEEEcccCCC---Ch---hHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCC
Q psy6508 2 EQHTEVAIKCIDKTKV---SE---NRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEK 74 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~---~~---~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~ 74 (477)
++|+.+|+|++....- ++ ...+.-.+|+.||+++ .||||+++.+.++++..+++|+|.|+.|.|.++|...-.
T Consensus 40 ~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~Vt 119 (411)
T KOG0599|consen 40 ETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVT 119 (411)
T ss_pred ccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhhee
Confidence 6889999999865422 11 2345677899999999 799999999999999999999999999999999998778
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccC
Q psy6508 75 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 75 l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~ 153 (477)
++++..++|++|+..|+.|||.++||||||||+|||+++| ++++ .|||.+.+...... -..-.||+.|.+||.+
T Consensus 120 lSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~i--sDFGFa~~l~~Gek---LrelCGTPgYLAPEti 194 (411)
T KOG0599|consen 120 LSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKI--SDFGFACQLEPGEK---LRELCGTPGYLAPETI 194 (411)
T ss_pred ecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEE--eccceeeccCCchh---HHHhcCCCcccChhhe
Confidence 9999999999999999999999999999999999999876 4444 59999876543221 1235788999999988
Q ss_pred CCC---------CcccccCcceEEEEEE--eeeccc
Q psy6508 154 SSK---------TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 154 ~~~---------~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
..+ ..+|. |+.|+++|.+ |.+||.
T Consensus 195 kC~m~e~~pGYs~EVD~-Wa~GVImyTLLaGcpPFw 229 (411)
T KOG0599|consen 195 KCSMYENHPGYSKEVDE-WACGVIMYTLLAGCPPFW 229 (411)
T ss_pred eeecccCCCCccchhhH-HHHHHHHHHHHcCCCchh
Confidence 655 56899 9999999998 788886
No 76
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.94 E-value=1.3e-26 Score=230.38 Aligned_cols=174 Identities=20% Similarity=0.345 Sum_probs=143.2
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||+|++++... .....+.+.+|..+++.+ +||||+++++++...+.+|+||||++|++|.+++.+.+.+++..
T Consensus 18 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~ 97 (320)
T cd05590 18 ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEAR 97 (320)
T ss_pred CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHH
Confidence 4688999999876532 233456678899999877 79999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++||||||+|||++.+. .+.++|||++....... ....+..+++.|+|||...+.
T Consensus 98 ~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~-~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (320)
T cd05590 98 ARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG-HCKLADFGMCKEGIFNG--KTTSTFCGTPDYIAPEILQEMLYG 174 (320)
T ss_pred HHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC-cEEEeeCCCCeecCcCC--CcccccccCccccCHHHHcCCCCC
Confidence 999999999999999999999999999999997653 34445999875432111 112235678899999988765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 175 ~~~Di-wslG~il~el~~g~~Pf~~ 198 (320)
T cd05590 175 PSVDW-WAMGVLLYEMLCGHAPFEA 198 (320)
T ss_pred Cccch-hhhHHHHHHHhhCCCCCCC
Confidence 67899 9999999999 6788864
No 77
>KOG0194|consensus
Probab=99.94 E-value=7e-26 Score=229.00 Aligned_cols=169 Identities=20% Similarity=0.363 Sum_probs=143.1
Q ss_pred EEEEEcccC-CCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHH
Q psy6508 7 VAIKCIDKT-KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFV 84 (477)
Q Consensus 7 vAiK~i~~~-~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~~i~ 84 (477)
||+|..+.+ ........+|.+|.++|++++||||+++||+...+.++++|||+|+||+|.++|++++ .++..+...++
T Consensus 189 VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~ 268 (474)
T KOG0194|consen 189 VAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFC 268 (474)
T ss_pred eEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 899998763 3567788899999999999999999999999999999999999999999999999977 49999999999
Q ss_pred HHHHHHHHHHHhCCcEEccCCCCceeeccCcc-eeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cccc
Q psy6508 85 RQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLE 160 (477)
Q Consensus 85 ~qi~~aL~~LH~~givHrDlkp~NIll~~~~~-rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~D 160 (477)
.+.+.||+|||+++++||||-.+|+|+..+++ ++ .|||++.... .+.......-....|.|||.+... .++|
T Consensus 269 ~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKI--SDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTD 344 (474)
T KOG0194|consen 269 YDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKI--SDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTD 344 (474)
T ss_pred HHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEe--CccccccCCc--ceeeccccccCcceecChhhhccCccccccc
Confidence 99999999999999999999999999988665 55 4999975433 333222233233459999998876 7899
Q ss_pred ccCcceEEEEEE---eeeccccc
Q psy6508 161 YQRSKGELYVEF---KFAPFASQ 180 (477)
Q Consensus 161 i~~s~G~il~e~---~~~Pf~~~ 180 (477)
+ |++|+++||+ +..||.+.
T Consensus 345 V-~sfGV~~~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 345 V-WSFGVLLWEIFENGAEPYPGM 366 (474)
T ss_pred h-hheeeeEEeeeccCCCCCCCC
Confidence 9 9999999999 45677653
No 78
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.94 E-value=4e-26 Score=227.34 Aligned_cols=174 Identities=20% Similarity=0.329 Sum_probs=139.4
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHH-HHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIK-ALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||+|++.+.... ......+.+|.. +++.++||||+++++++...+..|+||||++|++|.+++...+.+++..
T Consensus 18 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 97 (325)
T cd05602 18 AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR 97 (325)
T ss_pred CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHH
Confidence 46788999998764322 122234455544 5678899999999999999999999999999999999998878899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
++.++.|++.||.|||++||+||||||+|||++.+. .+.++|||++....... ....+..+++.|+|||+..+.
T Consensus 98 ~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~-~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (325)
T cd05602 98 ARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG-HIVLTDFGLCKENIEHN--GTTSTFCGTPEYLAPEVLHKQPYD 174 (325)
T ss_pred HHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC-CEEEccCCCCcccccCC--CCcccccCCccccCHHHHcCCCCC
Confidence 999999999999999999999999999999997643 34456999875432111 112345678899999988765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|+| +..||.+
T Consensus 175 ~~~Di-wslG~il~el~~g~~pf~~ 198 (325)
T cd05602 175 RTVDW-WCLGAVLYEMLYGLPPFYS 198 (325)
T ss_pred Ccccc-ccccHHHHHHhcCCCCCCC
Confidence 67899 9999999999 6678864
No 79
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.94 E-value=2.8e-26 Score=228.87 Aligned_cols=174 Identities=22% Similarity=0.364 Sum_probs=144.1
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||+|++++.... ......+.+|..++.++ +||||+++++++..++..|+||||+++++|..++...+.+++..
T Consensus 18 ~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~ 97 (329)
T cd05618 18 KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH 97 (329)
T ss_pred CCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHH
Confidence 46889999999876433 33445688899998887 89999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
++.++.|++.||.|||++||+||||||+||+++.+. .+.++|||++....... ....+..++..|+|||...+.
T Consensus 98 ~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~-~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (329)
T cd05618 98 ARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYG 174 (329)
T ss_pred HHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC-CEEEeeCCccccccCCC--CccccccCCccccCHHHHcCCCCC
Confidence 999999999999999999999999999999997653 34445999875432211 112245678899999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 175 ~~~Di-wslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 175 FSVDW-WALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred Cccce-ecccHHHHHHhhCCCCCcc
Confidence 67899 9999999999 7788853
No 80
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.93 E-value=1.6e-26 Score=234.29 Aligned_cols=174 Identities=21% Similarity=0.352 Sum_probs=142.8
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|++.+... .....+.+.+|+.+++.++||||+++++.+..++.+|+||||++||+|.+++... .+++..+
T Consensus 66 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~ 144 (370)
T cd05621 66 SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWA 144 (370)
T ss_pred CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHH
Confidence 4688999999875432 2233456889999999999999999999999999999999999999999999764 6899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.||+.||.|||++||+||||||+|||++.+. .+.++|||.+........ ....+..+++.|+|||++.+.
T Consensus 145 ~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~-~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~ 222 (370)
T cd05621 145 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG-HLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDG 222 (370)
T ss_pred HHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC-CEEEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCC
Confidence 99999999999999999999999999999997642 334459998865432221 122356788999999987542
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|+| +..||.+
T Consensus 223 ~~~~~~Di-wSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 223 YYGRECDW-WSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred CCCcccCE-EeehHHHHHHHhCCCCCCC
Confidence 57899 9999999999 7788864
No 81
>KOG4250|consensus
Probab=99.93 E-value=3.2e-27 Score=241.14 Aligned_cols=173 Identities=28% Similarity=0.364 Sum_probs=146.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC------eEEEEEecCCCCCHHHHHHhCC--
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER------YVYIILEYCDGGDLCSFIRSHE-- 73 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~------~~~lv~e~~~g~sL~~~l~~~~-- 73 (477)
++|+.||||.+++.. +....+.+.+|+++|++|+|||||+++++-++.. ...++||||.||+|+..+.+..
T Consensus 36 etG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~ 114 (732)
T KOG4250|consen 36 ETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENA 114 (732)
T ss_pred ccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccc
Confidence 689999999998764 4455678999999999999999999999855433 5789999999999999998743
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc---CcceeecccccceecccCCcccccCCeEEEeccccc
Q psy6508 74 -KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEP 149 (477)
Q Consensus 74 -~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~---~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~p 149 (477)
.+++.+++.++.++..||.|||++||+||||||+||++-. +..-..++|||.++..+... .-.+.+||..|.+
T Consensus 115 ~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLh 191 (732)
T KOG4250|consen 115 YGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLH 191 (732)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---eeeeecCchhhcC
Confidence 5999999999999999999999999999999999999943 44455567999998765443 2357899999999
Q ss_pred cccCCC-C---CcccccCcceEEEEEE--eeecccc
Q psy6508 150 REIPSS-K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 150 pE~~~~-~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
||...+ + ..+|. ||+|+++|+. |..||-.
T Consensus 192 Pel~E~q~~y~~tVDL-WS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 192 PELYERQKKYTATVDL-WSFGVTLYECATGELPFIP 226 (732)
T ss_pred hHHHhhccCcCceeeh-hhhhhHHHHHhccCCCCCc
Confidence 999885 3 66899 9999999999 7777763
No 82
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.93 E-value=1.1e-26 Score=232.40 Aligned_cols=174 Identities=21% Similarity=0.305 Sum_probs=135.9
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeC-CeEEEEEecCCCCCHHHHHHhC--------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDE-RYVYIILEYCDGGDLCSFIRSH-------- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~-~~~~lv~e~~~g~sL~~~l~~~-------- 72 (477)
+++.||+|+++... .....+.+.+|+.+++.+ +||||+++++++... +.++++|||++||+|.+++...
T Consensus 36 ~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~ 114 (338)
T cd05102 36 SCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYR 114 (338)
T ss_pred cchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhccccc
Confidence 45689999987543 334456789999999999 899999999988754 4689999999999999999752
Q ss_pred ------------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy6508 73 ------------------------------------------------------EKLSEFQCQQFVRQLVLALKFLRENN 98 (477)
Q Consensus 73 ------------------------------------------------------~~l~~~~~~~i~~qi~~aL~~LH~~g 98 (477)
..+++..+..++.|++.||.|||++|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 194 (338)
T cd05102 115 EKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRK 194 (338)
T ss_pred ccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23677888999999999999999999
Q ss_pred cEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE---
Q psy6508 99 VCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--- 172 (477)
Q Consensus 99 ivHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--- 172 (477)
|+||||||+|||++.+. ++.++|||++.............+..++..|+|||...+. .++|+ ||+|+++||+
T Consensus 195 ivHrDiKp~Nil~~~~~-~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi-wslG~il~el~~~ 272 (338)
T cd05102 195 CIHRDLAARNILLSENN-VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDV-WSFGVLLWEIFSL 272 (338)
T ss_pred EECCCCccceEEEcCCC-cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCH-HHHHHHHHHHHhC
Confidence 99999999999997643 3445699988653322111111233345679999987655 67899 9999999997
Q ss_pred eeecccc
Q psy6508 173 KFAPFAS 179 (477)
Q Consensus 173 ~~~Pf~~ 179 (477)
+..||.+
T Consensus 273 g~~pf~~ 279 (338)
T cd05102 273 GASPYPG 279 (338)
T ss_pred CCCCCCC
Confidence 5677764
No 83
>PHA02988 hypothetical protein; Provisional
Probab=99.93 E-value=3.3e-27 Score=230.54 Aligned_cols=170 Identities=22% Similarity=0.253 Sum_probs=140.9
Q ss_pred CCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEe----CCeEEEEEecCCCCCHHHHHHhCCCCCH
Q psy6508 3 QHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWD----ERYVYIILEYCDGGDLCSFIRSHEKLSE 77 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~~l~~ 77 (477)
+|+.||||.++...... ...+.+.+|+.+|++++||||+++++++.+ ...++++|||++||+|.+++.+.+.+++
T Consensus 42 ~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~ 121 (283)
T PHA02988 42 NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSF 121 (283)
T ss_pred CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCCh
Confidence 57899999997765433 234678899999999999999999999876 3578999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS- 155 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~- 155 (477)
.....++.|++.||.|||+. +++||||||+||+++.+. .+.++|||++....... .+.+++..|+|||...+
T Consensus 122 ~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~-~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~ 195 (283)
T PHA02988 122 KTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY-KLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDI 195 (283)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC-cEEEcccchHhhhcccc-----ccccCcccccCHHHhhhc
Confidence 99999999999999999984 999999999999998653 33445999876443322 23456778999999865
Q ss_pred -C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 -K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 -~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|+++||+ +..||.+
T Consensus 196 ~~~~~~k~Di-~SlGvil~el~~g~~Pf~~ 224 (283)
T PHA02988 196 FSEYTIKDDI-YSLGVVLWEIFTGKIPFEN 224 (283)
T ss_pred cccccchhhh-hHHHHHHHHHHHCCCCCCC
Confidence 2 68899 9999999999 7788874
No 84
>KOG0201|consensus
Probab=99.93 E-value=1.1e-27 Score=232.54 Aligned_cols=175 Identities=26% Similarity=0.391 Sum_probs=154.8
Q ss_pred CCCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 1 ~~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
|++++.||||+++.+... ...++++.|+.+|.++++|||.++|+.+..+..+|++||||.||++.+.++..+.+++..+
T Consensus 35 ~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i 113 (467)
T KOG0201|consen 35 NKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEI 113 (467)
T ss_pred ccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCcccee
Confidence 468999999999887643 4567889999999999999999999999999999999999999999999998777799999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
..++++++.||.|||.++.+|||||+.|||+..+ .+++. |||++.......... +|.+||+.|||||+..+.
T Consensus 114 ~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~--DfgVa~ql~~~~~rr--~tfvGTPfwMAPEVI~~~~Y~ 189 (467)
T KOG0201|consen 114 AVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLA--DFGVAGQLTNTVKRR--KTFVGTPFWMAPEVIKQSGYD 189 (467)
T ss_pred eeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEE--ecceeeeeechhhcc--ccccccccccchhhhcccccc
Confidence 9999999999999999999999999999999764 55555 999987766544333 799999999999999875
Q ss_pred CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
.++|| ||+|++.+|| |.+|++...
T Consensus 190 ~KADI-WSLGITaiEla~GePP~s~~h 215 (467)
T KOG0201|consen 190 TKADI-WSLGITAIELAKGEPPHSKLH 215 (467)
T ss_pred chhhh-hhhhHHHHHHhcCCCCCcccC
Confidence 88999 9999999999 789998643
No 85
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.93 E-value=3.6e-26 Score=239.34 Aligned_cols=172 Identities=23% Similarity=0.301 Sum_probs=142.0
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh----CCCCCHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS----HEKLSEFQ 79 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~l~~~~ 79 (477)
++.||+|.+... .......+.+|+.+|+.++||||+++++.+..++..|+||||++||+|.+++.. ...+++..
T Consensus 93 ~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~ 170 (478)
T PTZ00267 93 KEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYE 170 (478)
T ss_pred CeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHH
Confidence 677899976543 234445688999999999999999999999999999999999999999988754 34689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++||+||||||+|||++.+. .+.++|||++.............+..+++.|+|||...+.
T Consensus 171 ~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~-~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 249 (478)
T PTZ00267 171 VGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG-IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYS 249 (478)
T ss_pred HHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC-cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCC
Confidence 999999999999999999999999999999998643 3444599998765544332334456688899999988765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 250 ~~~Dv-~slG~~l~el~tg~~Pf~~ 273 (478)
T PTZ00267 250 KKADM-WSLGVILYELLTLHRPFKG 273 (478)
T ss_pred cHHhH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6688864
No 86
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.93 E-value=4.6e-26 Score=227.56 Aligned_cols=175 Identities=21% Similarity=0.307 Sum_probs=141.9
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.+++.||+|++.+... .....+.+.+|..+++.++||||+++++++..++.+|+||||++|++|.+++.+ ...+++..
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~ 103 (331)
T cd05597 24 NTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDM 103 (331)
T ss_pred CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHH
Confidence 4688999999875332 223445688999999999999999999999999999999999999999999976 45799999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC----
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS---- 155 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~---- 155 (477)
++.++.|++.||+|||++||+||||||+|||++.+. .+.++|||.+........ .......+++.|+|||++.+
T Consensus 104 ~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 181 (331)
T cd05597 104 ARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG-HIRLADFGSCLRLLADGT-VQSNVAVGTPDYISPEILQAMEDG 181 (331)
T ss_pred HHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC-CEEEEECCceeecCCCCC-ccccceeccccccCHHHHhhcccc
Confidence 999999999999999999999999999999997543 334459998754332211 11123467889999998752
Q ss_pred ----CCcccccCcceEEEEEE--eeecccc
Q psy6508 156 ----KTSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ----~~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
..++|+ ||+|+++|++ +..||.+
T Consensus 182 ~~~~~~~~Di-wslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 182 KGRYGPECDW-WSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ccCCCCccee-ehhhhHHHHHhhCCCCCCC
Confidence 157899 9999999999 7788865
No 87
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.93 E-value=3.5e-26 Score=223.44 Aligned_cols=173 Identities=19% Similarity=0.256 Sum_probs=141.8
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~ 78 (477)
.+|+.||+|.+.+..... .....+.+|+.+++.++||||+++++.+...+..+++|||+++|+|.+++... ..+++.
T Consensus 23 ~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~ 102 (285)
T cd05631 23 ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQ 102 (285)
T ss_pred cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHH
Confidence 478999999987654332 23356789999999999999999999999999999999999999999888643 368999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++||+||||||+|||++.+. .+.++|||++....... ......++..|+|||...+.
T Consensus 103 ~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~ 178 (285)
T cd05631 103 RAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG-HIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKY 178 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC-CEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCC
Confidence 9999999999999999999999999999999997643 34445999886543221 11234678899999998765
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 179 ~~~~Dv-wslGvil~el~~g~~pf~~ 203 (285)
T cd05631 179 TFSPDW-WGLGCLIYEMIQGQSPFRK 203 (285)
T ss_pred CcccCc-hhHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6788874
No 88
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.93 E-value=3.9e-26 Score=227.65 Aligned_cols=174 Identities=21% Similarity=0.368 Sum_probs=144.5
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
++++.||+|++++.... ....+.+.+|..++.++ +||||+++++++...+.+|+||||++|++|..++...+.+++..
T Consensus 18 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~ 97 (327)
T cd05617 18 KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEH 97 (327)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHH
Confidence 46889999999876433 33456788999999998 69999999999999999999999999999999998878899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
++.++.|++.||.|||++||+||||||+|||++.+. .+.++|||++....... ....+..+++.|+|||...+.
T Consensus 98 ~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~-~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (327)
T cd05617 98 ARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG-HIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYG 174 (327)
T ss_pred HHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC-CEEEeccccceeccCCC--CceecccCCcccCCHHHHCCCCCC
Confidence 999999999999999999999999999999997643 24445999876432211 112345678899999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 175 ~~~Di-wslGvil~ell~g~~pf~~ 198 (327)
T cd05617 175 FSVDW-WALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred chhee-ehhHHHHHHHHhCCCCCCc
Confidence 67899 9999999999 7788863
No 89
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.93 E-value=2.7e-26 Score=232.71 Aligned_cols=174 Identities=22% Similarity=0.347 Sum_probs=143.0
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|++.+... .....+.+.+|..+++.++||||+++++.+..++..|+||||++||+|.+++... .+++..+
T Consensus 66 ~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~ 144 (371)
T cd05622 66 STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWA 144 (371)
T ss_pred CCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHH
Confidence 4788999999875432 2233456889999999999999999999999999999999999999999998764 6899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.++.|++.||.|||++||+||||||+|||++.+. .+.++|||.+........ ....+..+++.|+|||.+.+.
T Consensus 145 ~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~-~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~ 222 (371)
T cd05622 145 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-HLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDG 222 (371)
T ss_pred HHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC-CEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCc
Confidence 99999999999999999999999999999997643 344459999865433221 122356788999999987542
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++||| +..||.+
T Consensus 223 ~~~~~~Di-wSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 223 YYGRECDW-WSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred cCCCccce-eehhHHHHHHHhCCCCCCC
Confidence 57899 9999999999 7788874
No 90
>KOG0604|consensus
Probab=99.93 E-value=7.7e-27 Score=216.20 Aligned_cols=205 Identities=20% Similarity=0.323 Sum_probs=161.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEe----CCeEEEEEecCCCCCHHHHHHhCCC--
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWD----ERYVYIILEYCDGGDLCSFIRSHEK-- 74 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~~-- 74 (477)
.+|+.+|+|++.-. .+.++|+++.-.. .|||||.++++++. ...+.+|||.++||.|.+.++.++.
T Consensus 85 ~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~a 157 (400)
T KOG0604|consen 85 RTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQA 157 (400)
T ss_pred cchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccccc
Confidence 35666677765322 3467899886655 69999999998764 3578999999999999999998764
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc--CcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 75 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN--NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 75 l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~--~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
+++.++..|++||..|+.|||+.+|.||||||+|+|... .+..+.+.|||.++...... .-.|...|+.|.|||+
T Consensus 158 fTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~---~L~TPc~TPyYvaPev 234 (400)
T KOG0604|consen 158 FTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG---DLMTPCFTPYYVAPEV 234 (400)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCc---cccCCcccccccCHHH
Confidence 999999999999999999999999999999999999954 35566677999997665322 1246778899999999
Q ss_pred CCCC---CcccccCcceEEEEEE--eeeccccccccC--------------CCCCcchHHHHHHHHHHhhhhhhcccCCC
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF--KFAPFASQIRTG--------------WLRDSEEKELGNHLKRALEPAVCRHEFSN 213 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~--~~~Pf~~~~r~~--------------~~~~~~~~~l~~~i~~~l~~~i~~~~~Pr 213 (477)
+... .+.|+ ||+|+++|-+ ||+||.+..... .++..+-..++...+..++..+..++-.|
T Consensus 235 lg~eKydkscdm-wSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteR 313 (400)
T KOG0604|consen 235 LGPEKYDKSCDM-WSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTER 313 (400)
T ss_pred hCchhcCCCCCc-cchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhh
Confidence 8766 66799 9999999988 999998753221 14556667777777777777776666666
Q ss_pred Cccc
Q psy6508 214 FQVD 217 (477)
Q Consensus 214 ~~i~ 217 (477)
.+|.
T Consensus 314 lTI~ 317 (400)
T KOG0604|consen 314 LTIE 317 (400)
T ss_pred eeHH
Confidence 6654
No 91
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.93 E-value=3.7e-26 Score=226.74 Aligned_cols=174 Identities=18% Similarity=0.317 Sum_probs=141.8
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+|+.||+|++++.... ....+.+..|..++... +||||+++++++...+.+|+||||++|++|..++...+.+++..
T Consensus 18 ~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~ 97 (316)
T cd05620 18 GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYR 97 (316)
T ss_pred CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHH
Confidence 46889999999765321 23345567788888765 89999999999999999999999999999999998878899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||+|||++||+||||||+||+++.++ .+.++|||.+....... ....+..++..|+|||...+.
T Consensus 98 ~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (316)
T cd05620 98 ATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG-HIKIADFGMCKENVFGD--NRASTFCGTPDYIAPEILQGLKYT 174 (316)
T ss_pred HHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC-CEEeCccCCCeecccCC--CceeccCCCcCccCHHHHcCCCCC
Confidence 999999999999999999999999999999997653 34456999875322111 112345678899999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++||+ +..||.+
T Consensus 175 ~~~Di-wslGvil~el~~g~~Pf~~ 198 (316)
T cd05620 175 FSVDW-WSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred cccch-hhhHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6678764
No 92
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.93 E-value=3.8e-26 Score=227.38 Aligned_cols=173 Identities=23% Similarity=0.374 Sum_probs=139.4
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHH---HhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKAL---KLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il---~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~ 77 (477)
.+|+.||||++++... .....+.+.+|..++ +.++||||+++++++...+..|+||||++|++|..++.. +.+++
T Consensus 22 ~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~ 100 (324)
T cd05589 22 KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSE 100 (324)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCH
Confidence 4789999999976532 223345677777665 456799999999999999999999999999999998865 47999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
..+..++.|++.||.|||++|++||||||+||+++.++ .+.++|||++....+.. ....+..+++.|+|||...+.
T Consensus 101 ~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~-~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~ 177 (324)
T cd05589 101 PRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG-FVKIADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETS 177 (324)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC-cEEeCcccCCccCCCCC--CcccccccCccccCHhHhcCCC
Confidence 99999999999999999999999999999999997653 34445999875433221 122345678899999998765
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 178 ~~~~~Di-wslG~il~el~~G~~pf~~ 203 (324)
T cd05589 178 YTRAVDW-WGLGVLIYEMLVGESPFPG 203 (324)
T ss_pred CCcccch-hhHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6677764
No 93
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.93 E-value=2.5e-26 Score=233.02 Aligned_cols=174 Identities=22% Similarity=0.335 Sum_probs=142.1
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|++++.... ....+.+.+|+.+++.++||||+++++++.+++.+|+||||++||+|.+++.. ..+++..+
T Consensus 66 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~ 144 (370)
T cd05596 66 SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWA 144 (370)
T ss_pred CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHH
Confidence 46889999999764332 23345678999999999999999999999999999999999999999999876 46899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.|++.||.|||++||+||||||+|||++.+. .+.++|||.+........ ....+..+++.|+|||.+.+.
T Consensus 145 ~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~-~~kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ 222 (370)
T cd05596 145 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-HLKLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDG 222 (370)
T ss_pred HHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC-CEEEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCC
Confidence 99999999999999999999999999999997643 344459998865433221 112345688899999987532
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++||+ +..||.+
T Consensus 223 ~~~~~~Di-wSlGvilyelltG~~Pf~~ 249 (370)
T cd05596 223 YYGRECDW-WSVGVFLYEMLVGDTPFYA 249 (370)
T ss_pred CCCCceee-eehhHHHHHHHhCCCCcCC
Confidence 57899 9999999999 7788875
No 94
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.93 E-value=8.8e-27 Score=227.08 Aligned_cols=174 Identities=20% Similarity=0.305 Sum_probs=141.5
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh----CCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS----HEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~l~ 76 (477)
.+|+.||+|.+.+..... ...+.+..|+.+++.++||||+++++++..++..|+||||++|++|..++.. +..++
T Consensus 16 ~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~ 95 (280)
T cd05608 16 ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFP 95 (280)
T ss_pred cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCC
Confidence 468899999987654332 3346778999999999999999999999999999999999999999988743 34689
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
+..++.++.|++.||.|||++||+||||||+||+++.+. .+.++|||.+....... ....+..++..|+|||...+.
T Consensus 96 ~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~ 172 (280)
T cd05608 96 EPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG-NVRISDLGLAVELKDGQ--SKTKGYAGTPGFMAPELLQGE 172 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-CEEEeeCccceecCCCC--ccccccCCCcCccCHHHhcCC
Confidence 999999999999999999999999999999999997643 34445999875433211 112234577889999998765
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 173 ~~~~~~Dv-wslG~il~el~~g~~pf~~ 199 (280)
T cd05608 173 EYDFSVDY-FALGVTLYEMIAARGPFRA 199 (280)
T ss_pred CCCccccH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6778864
No 95
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.93 E-value=7.9e-26 Score=225.15 Aligned_cols=174 Identities=20% Similarity=0.301 Sum_probs=141.6
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCC-CCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHH-QHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||+|++.+... .....+.+..|..+++.++| ++|+++++++...+.+|+||||++|++|.+++...+.+++..
T Consensus 23 ~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~ 102 (324)
T cd05587 23 GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPH 102 (324)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHH
Confidence 4678999999976533 23345678899999999965 568899999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++||+||||||+|||++.+. .+.++|||++....... ....+..++..|+|||...+.
T Consensus 103 ~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~-~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 179 (324)
T cd05587 103 AVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG-HIKIADFGMCKENIFGG--KTTRTFCGTPDYIAPEIIAYQPYG 179 (324)
T ss_pred HHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC-CEEEeecCcceecCCCC--CceeeecCCccccChhhhcCCCCC
Confidence 999999999999999999999999999999997643 33445999875322111 111234578899999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 180 ~~~Di-wslGvil~elltG~~pf~~ 203 (324)
T cd05587 180 KSVDW-WAFGVLLYEMLAGQPPFDG 203 (324)
T ss_pred cccch-hhhHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6788864
No 96
>KOG4645|consensus
Probab=99.93 E-value=9.9e-27 Score=249.96 Aligned_cols=177 Identities=26% Similarity=0.402 Sum_probs=152.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++|...|+|-++...........+.+|..+|..++|||+|++||+-...+..+|.||||+||+|.+.++..+..++...+
T Consensus 1258 ~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~ 1337 (1509)
T KOG4645|consen 1258 DTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTR 1337 (1509)
T ss_pred CccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHH
Confidence 68889999988766555555677889999999999999999999999999999999999999999999987778888889
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccC--CeEEEeccccccccCCCC---
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQG--NTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g--~t~v~~~~y~ppE~~~~~--- 156 (477)
.+..|++.|+.|||++|||||||||.||+++.++ -+...|||.+....+......| +..+||+.|||||++.+.
T Consensus 1338 vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g-~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~k 1416 (1509)
T KOG4645|consen 1338 VYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG-LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGK 1416 (1509)
T ss_pred HHHHHHHHHHHHHHhcCceecCCCccceeeecCC-cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccC
Confidence 9999999999999999999999999999998876 4555699999877766421111 357899999999999876
Q ss_pred ---CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.+.|| ||+||+.+|| |..||+.-
T Consensus 1417 G~~~A~Di-WslGCVVlEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1417 GHGGAADI-WSLGCVVLEMATGKRPWAEL 1444 (1509)
T ss_pred CCCcchhh-hcccceEEEeecCCCchhhc
Confidence 67899 9999999999 77888753
No 97
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.93 E-value=5.6e-26 Score=225.64 Aligned_cols=174 Identities=21% Similarity=0.361 Sum_probs=143.2
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||||++++... .......+.+|..+++.+ +||||+++++++...+.+|+||||++|++|..++.+.+.+++..
T Consensus 18 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~ 97 (318)
T cd05570 18 GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPR 97 (318)
T ss_pred CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHH
Confidence 4688999999986543 233456678899999888 79999999999999999999999999999999998887899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+....... ....+..++..|+|||...+.
T Consensus 98 ~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~ 174 (318)
T cd05570 98 ARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG-HIKIADFGMCKEGILGG--VTTSTFCGTPDYIAPEILSYQPYG 174 (318)
T ss_pred HHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC-cEEecccCCCeecCcCC--CcccceecCccccCHHHhcCCCCC
Confidence 999999999999999999999999999999997653 34445999875422111 111234678889999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 175 ~~~Di-wslGvil~~l~~G~~pf~~ 198 (318)
T cd05570 175 PAVDW-WALGVLLYEMLAGQSPFEG 198 (318)
T ss_pred cchhh-hhHHHHHHHHhhCCCCCCC
Confidence 67899 9999999999 6678864
No 98
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.93 E-value=3.4e-26 Score=225.50 Aligned_cols=166 Identities=24% Similarity=0.297 Sum_probs=134.0
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC----------
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE---------- 73 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------- 73 (477)
+..||+|++.... .......+.+|+.++++++||||+++++++...+..+++|||+++++|.+++....
T Consensus 46 ~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 124 (304)
T cd05096 46 PLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGND 124 (304)
T ss_pred ceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcccccccccccc
Confidence 4579999987543 34456779999999999999999999999999999999999999999999986531
Q ss_pred ---------CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEe
Q psy6508 74 ---------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVIC 144 (477)
Q Consensus 74 ---------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~ 144 (477)
.+++..+..++.|++.||.|||++||+||||||+|||++.+. .+.++|||.+.............+..++
T Consensus 125 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~-~~kl~DfG~~~~~~~~~~~~~~~~~~~~ 203 (304)
T cd05096 125 AVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENL-TIKIADFGMSRNLYAGDYYRIQGRAVLP 203 (304)
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCc-cEEECCCccceecccCceeEecCcCCCC
Confidence 357788899999999999999999999999999999998653 3445699988654332222222333445
Q ss_pred ccccccccCCCC---CcccccCcceEEEEEE
Q psy6508 145 SVFEPREIPSSK---TSLEYQRSKGELYVEF 172 (477)
Q Consensus 145 ~~y~ppE~~~~~---~~~Di~~s~G~il~e~ 172 (477)
..|+|||...+. .++|+ ||+|+++||+
T Consensus 204 ~~y~aPE~~~~~~~~~~~Dv-~slG~~l~el 233 (304)
T cd05096 204 IRWMAWECILMGKFTTASDV-WAFGVTLWEI 233 (304)
T ss_pred ccccCHHHHhcCCCCchhhh-HHHHHHHHHH
Confidence 679999987654 67899 9999999997
No 99
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.93 E-value=8.7e-26 Score=224.73 Aligned_cols=174 Identities=20% Similarity=0.298 Sum_probs=142.3
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||+|++++.... ....+.+..|..++..+ +||+|+++++++...+.+|+||||++||+|.+++...+.+++..
T Consensus 23 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~ 102 (323)
T cd05616 23 GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPH 102 (323)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHH
Confidence 46789999999765432 23345677888888887 68999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++||+||||||+|||++.+. .+.++|||++....... ....+..+++.|+|||...+.
T Consensus 103 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~-~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 179 (323)
T cd05616 103 AVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG-HIKIADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYG 179 (323)
T ss_pred HHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC-cEEEccCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCC
Confidence 999999999999999999999999999999997653 34446999876432111 111234577889999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++||+ +..||.+
T Consensus 180 ~~~Di-wSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 180 KSVDW-WAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred Cccch-hchhHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6788864
No 100
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.93 E-value=1.7e-26 Score=227.58 Aligned_cols=172 Identities=25% Similarity=0.403 Sum_probs=138.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
.+++.||+|+++..... .....+.+|+.+++.++||||+++++++..+...|+||||++ ++|.+++..+ +.+++..+
T Consensus 28 ~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~ 105 (303)
T cd07869 28 VNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPENV 105 (303)
T ss_pred CCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHHH
Confidence 36889999998765422 223457789999999999999999999999999999999997 7888888664 46899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.++.|++.||+|||++||+||||||+|||++.++ ++.++|||.+....... ....+..++..|+|||+..+.
T Consensus 106 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ 182 (303)
T cd07869 106 KLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG-ELKLADFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYS 182 (303)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-CEEECCCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCCC
Confidence 99999999999999999999999999999997643 34456999875432211 122345678899999987543
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ |..||.+
T Consensus 183 ~~~Di-wslG~il~~l~~g~~pf~~ 206 (303)
T cd07869 183 TCLDM-WGVGCIFVEMIQGVAAFPG 206 (303)
T ss_pred cHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 7788874
No 101
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.93 E-value=1.6e-26 Score=234.63 Aligned_cols=174 Identities=22% Similarity=0.286 Sum_probs=138.1
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--------- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--------- 72 (477)
+++.||+|+++.... ....+.+.+|+.+++.+ +||||+++++++...+..|+||||+++|+|.+++...
T Consensus 67 ~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~ 145 (374)
T cd05106 67 NVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVM 145 (374)
T ss_pred ccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccc
Confidence 446899999976543 33456789999999999 8999999999999999999999999999999998542
Q ss_pred -------------------------------------------------------------CCCCHHHHHHHHHHHHHHH
Q psy6508 73 -------------------------------------------------------------EKLSEFQCQQFVRQLVLAL 91 (477)
Q Consensus 73 -------------------------------------------------------------~~l~~~~~~~i~~qi~~aL 91 (477)
.++++..+++++.|++.||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL 225 (374)
T cd05106 146 ALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGM 225 (374)
T ss_pred cccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHH
Confidence 1367888999999999999
Q ss_pred HHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---CcccccCcceEE
Q psy6508 92 KFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGEL 168 (477)
Q Consensus 92 ~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~i 168 (477)
.|||++||+||||||+|||++++. .+.+.|||++.............+..++..|+|||...+. .++|+ ||+|++
T Consensus 226 ~yLH~~giiHrDLkp~Nil~~~~~-~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-wSlGvi 303 (374)
T cd05106 226 DFLASKNCIHRDVAARNVLLTDGR-VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDV-WSYGIL 303 (374)
T ss_pred HHHHHCCEEeccCchheEEEeCCC-eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccH-HHHHHH
Confidence 999999999999999999998653 3445699988654322211122222334569999987654 78899 999999
Q ss_pred EEEE---eeecccc
Q psy6508 169 YVEF---KFAPFAS 179 (477)
Q Consensus 169 l~e~---~~~Pf~~ 179 (477)
+|++ +..||..
T Consensus 304 l~ellt~G~~Pf~~ 317 (374)
T cd05106 304 LWEIFSLGKSPYPG 317 (374)
T ss_pred HHHHHhCCCCCCcc
Confidence 9997 5577764
No 102
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.93 E-value=1.2e-25 Score=224.61 Aligned_cols=175 Identities=23% Similarity=0.336 Sum_probs=141.8
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.+++.||+|++.+... .....+.+.+|..++..++||||+++++++..++..|+||||++||+|.+++.+ ...+++..
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~ 103 (331)
T cd05624 24 HTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDM 103 (331)
T ss_pred CCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHH
Confidence 4678999999876432 223345688999999999999999999999999999999999999999999987 45799999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC----
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS---- 155 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~---- 155 (477)
++.++.|++.||+|||++||+||||||+|||++.+. .+.++|||++........ .......++..|+|||...+
T Consensus 104 ~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 181 (331)
T cd05624 104 ARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG-HIRLADFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDG 181 (331)
T ss_pred HHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC-CEEEEeccceeeccCCCc-eeeccccCCcccCCHHHHhccccC
Confidence 999999999999999999999999999999997643 334459998765432211 11123457889999998753
Q ss_pred --C--CcccccCcceEEEEEE--eeecccc
Q psy6508 156 --K--TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 --~--~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|+++|+| +..||..
T Consensus 182 ~~~~~~~~Di-wSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 182 MGKYGPECDW-WSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred CCCCCCcccE-EeeehhhhhhhhCCCCccC
Confidence 1 57899 9999999999 6788864
No 103
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.93 E-value=8.1e-26 Score=224.32 Aligned_cols=174 Identities=22% Similarity=0.332 Sum_probs=141.3
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
++++.||||+++.... .....+.+..|..+++.+ +||||+++++++...+.+|+||||++||+|.+++.....+++..
T Consensus 18 ~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~ 97 (316)
T cd05619 18 GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPR 97 (316)
T ss_pred CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHH
Confidence 4688999999876532 123345567788888765 89999999999999999999999999999999998877899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++||+||||||+||+++.+. .+.++|||.+....... ....+..++..|+|||...+.
T Consensus 98 ~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~-~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~ 174 (316)
T cd05619 98 ATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG-HIKIADFGMCKENMLGD--AKTCTFCGTPDYIAPEILLGQKYN 174 (316)
T ss_pred HHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC-CEEEccCCcceECCCCC--CceeeecCCccccCHHHHcCCCCC
Confidence 999999999999999999999999999999997653 34446999875422111 111345678899999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 175 ~~~Dv-wslG~il~el~~G~~pf~~ 198 (316)
T cd05619 175 TSVDW-WSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred chhhh-hhHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6678764
No 104
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.93 E-value=3e-26 Score=223.73 Aligned_cols=175 Identities=21% Similarity=0.319 Sum_probs=142.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|++..........+.+.+|+.+++.++||||+++++++..++..|+||||++++.+..+......+++..++
T Consensus 24 ~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~ 103 (287)
T cd07848 24 ETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVR 103 (287)
T ss_pred CCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHH
Confidence 46889999999876555555667889999999999999999999999999999999999987776655555579999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+........ .......++..|+|||...+. .+
T Consensus 104 ~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~ 181 (287)
T cd07848 104 SYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND-VLKLCDFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYGKA 181 (287)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-cEEEeeccCccccccccc-ccccccccccccCCcHHHcCCCCCCc
Confidence 9999999999999999999999999999997643 344459998865432111 112234678889999988665 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ ||+|+++||+ +..||.+
T Consensus 182 ~Di-wslGvil~el~~g~~pf~~ 203 (287)
T cd07848 182 VDM-WSVGCILGELSDGQPLFPG 203 (287)
T ss_pred hhH-HhHHHHHHHHHhCCCCCCC
Confidence 899 9999999999 6677764
No 105
>KOG4721|consensus
Probab=99.93 E-value=1.2e-26 Score=230.43 Aligned_cols=186 Identities=19% Similarity=0.279 Sum_probs=151.4
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~ 82 (477)
.++.||||+++.-+ ..+++-|++|+||||+.+.|+|.....+|||||||..|-|...|+..+.++......
T Consensus 146 ~netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~ 216 (904)
T KOG4721|consen 146 HNETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVD 216 (904)
T ss_pred cCceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHH
Confidence 36789999875321 246888999999999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccCc-ceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~-~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
|..+|+.|+.|||.+.|||||||..||||..++ +|+ .|||.++....- ...-...||..||+||++... .+
T Consensus 217 Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKI--sDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEK 291 (904)
T KOG4721|consen 217 WSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKI--SDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEK 291 (904)
T ss_pred HHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEe--ccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccc
Confidence 999999999999999999999999999997654 444 599988644322 122346778889999999887 88
Q ss_pred ccccCcceEEEEEE--eeecccccccc------------CCCCCcchHHHHHHHHHHhh
Q psy6508 159 LEYQRSKGELYVEF--KFAPFASQIRT------------GWLRDSEEKELGNHLKRALE 203 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~~~r~------------~~~~~~~~~~l~~~i~~~l~ 203 (477)
+|| ||+|+++||| +-.||...... ...+..-++.+..++++++.
T Consensus 292 VDI-wSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~ 349 (904)
T KOG4721|consen 292 VDI-WSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWN 349 (904)
T ss_pred cce-ehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHh
Confidence 999 9999999999 55777654322 22344556777777777654
No 106
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.93 E-value=3.2e-26 Score=228.86 Aligned_cols=175 Identities=28% Similarity=0.381 Sum_probs=139.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC-----CeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+|+.||||+++..........++.+|+.+++.++||||+++++++... ..+|+||||+. ++|.+++.....++
T Consensus 23 ~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~ 101 (338)
T cd07859 23 HTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDDLT 101 (338)
T ss_pred CCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcccCC
Confidence 4789999999875543344456788999999999999999999987643 35899999996 79999998878899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc-cccCCeEEEeccccccccCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY-IEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~-~~~g~t~v~~~~y~ppE~~~~ 155 (477)
+..+..++.|++.||.|||++||+||||||+|||++.+. ++.++|||.+........ .......++++.|+|||+..+
T Consensus 102 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 180 (338)
T cd07859 102 PEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 180 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhc
Confidence 999999999999999999999999999999999997653 344459998864322111 111233567889999998754
Q ss_pred --C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 --K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 --~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|+++|++ +..||.+
T Consensus 181 ~~~~~~~~~Dv-wSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 181 FFSKYTPAIDI-WSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred cccccCchhHH-HHHHHHHHHHHcCCCCCCC
Confidence 1 67899 9999999999 6677764
No 107
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.93 E-value=3.4e-26 Score=228.45 Aligned_cols=171 Identities=22% Similarity=0.266 Sum_probs=143.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+|..||+|.+.... .....+.+.+|+.++++++||||+++++++..++..++||||++|++|.+++.....+++..+.
T Consensus 28 ~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 106 (331)
T cd06649 28 PSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG 106 (331)
T ss_pred CCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHH
Confidence 468889999987643 3445577999999999999999999999999999999999999999999999887789999999
Q ss_pred HHHHHHHHHHHHHHhC-CcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLREN-NVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||.|||++ +|+||||||+||+++.+. .+.++|||++...... ......++..|+|||...+. .
T Consensus 107 ~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~ 181 (331)
T cd06649 107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSV 181 (331)
T ss_pred HHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC-cEEEccCccccccccc----ccccCCCCcCcCCHhHhcCCCCCc
Confidence 9999999999999986 699999999999997653 3444599987544322 12334677899999998765 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|+++||+ +..||..
T Consensus 182 ~~Di-wslG~il~el~tg~~p~~~ 204 (331)
T cd06649 182 QSDI-WSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred hHhH-HHHHHHHHHHHhCCCCCCC
Confidence 7899 9999999999 6788853
No 108
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.93 E-value=8.7e-26 Score=224.78 Aligned_cols=174 Identities=21% Similarity=0.306 Sum_probs=142.2
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+|+.||+|++++... .....+.+..|..+++.+. ||+|+++++++...+.+|+||||++|++|.+++...+.+++..
T Consensus 23 ~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~ 102 (323)
T cd05615 23 GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQ 102 (323)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHH
Confidence 4788999999876533 2334456788999998885 6788899999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++||+||||||+|||++.+. .+.++|||++........ ...+..++..|+|||...+.
T Consensus 103 ~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~-~ikL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 179 (323)
T cd05615 103 AVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG-HIKIADFGMCKEHMVDGV--TTRTFCGTPDYIAPEIIAYQPYG 179 (323)
T ss_pred HHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC-CEEEeccccccccCCCCc--cccCccCCccccCHHHHcCCCCC
Confidence 999999999999999999999999999999998653 344569998754322111 11234577899999988765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 180 ~~~Di-wslGvil~elltG~~pf~~ 203 (323)
T cd05615 180 KSVDW-WAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred Cccch-hhhHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6788864
No 109
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.93 E-value=8.9e-26 Score=220.88 Aligned_cols=172 Identities=25% Similarity=0.371 Sum_probs=139.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~ 80 (477)
.+++.||+|+++.... ......+.+|+.++++++||||+++++++..++..++||||++ ++|.+++...+ .+++..+
T Consensus 28 ~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~ 105 (288)
T cd07871 28 LTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQYLDNCGNLMSMHNV 105 (288)
T ss_pred CCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cCHHHHHHhcCCCCCHHHH
Confidence 4688999999875532 2233567899999999999999999999999999999999998 59999987654 5789999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.|++.||+|||++||+||||||+|||++.+. .+.++|||.+....... .......++..|+|||...+.
T Consensus 106 ~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~-~~kl~DfG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ 182 (288)
T cd07871 106 KIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG-ELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYS 182 (288)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-CEEECcCcceeeccCCC--ccccCceecccccChHHhcCCcccC
Confidence 99999999999999999999999999999997643 34445999876433211 122345678899999987653
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 183 ~~~Di-wslG~~l~~l~~g~~pf~~ 206 (288)
T cd07871 183 TPIDM-WGVGCILYEMATGRPMFPG 206 (288)
T ss_pred cHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6677763
No 110
>KOG1187|consensus
Probab=99.93 E-value=7.8e-26 Score=226.50 Aligned_cols=164 Identities=20% Similarity=0.248 Sum_probs=135.3
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC-eEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-YVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
+|+.||||++....... ..+|.+|+.++.+++|||+++++|+|.+.+ ..+||+||+++|+|.++|.... .++|..
T Consensus 98 ~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~ 175 (361)
T KOG1187|consen 98 DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWET 175 (361)
T ss_pred CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHH
Confidence 46899999887654332 455999999999999999999999999888 5999999999999999998765 789999
Q ss_pred HHHHHHHHHHHHHHHHhC---CcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeE-EEeccccccccCCC
Q psy6508 80 CQQFVRQLVLALKFLREN---NVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTK-VICSVFEPREIPSS 155 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~-v~~~~y~ppE~~~~ 155 (477)
+.+|+.+++.||+|||+. .|+||||||+|||+|.+ ......|||++...... .....+. .+|..|.+||....
T Consensus 176 R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~-~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~ 252 (361)
T KOG1187|consen 176 RLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED-FNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYAST 252 (361)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC-CCEEccCccCcccCCcc--ccceeeecCCCCccCChhhhcc
Confidence 999999999999999985 39999999999999965 23344699998443320 1111222 68889999999865
Q ss_pred C---CcccccCcceEEEEEE
Q psy6508 156 K---TSLEYQRSKGELYVEF 172 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~ 172 (477)
. .++|+ ||+|+++.|+
T Consensus 253 g~lt~KsDV-ySFGVvllEl 271 (361)
T KOG1187|consen 253 GKLTEKSDV-YSFGVVLLEL 271 (361)
T ss_pred CCcCccccc-ccchHHHHHH
Confidence 4 78999 9999999998
No 111
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.93 E-value=4.6e-26 Score=227.75 Aligned_cols=171 Identities=22% Similarity=0.267 Sum_probs=142.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.+.... .....+.+.+|++++++++||||+++++++...+..|+||||++|++|.+++...+.+++..+.
T Consensus 28 ~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 106 (333)
T cd06650 28 PSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 106 (333)
T ss_pred CCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHH
Confidence 467889999887653 3445567999999999999999999999999999999999999999999999887889999999
Q ss_pred HHHHHHHHHHHHHHhC-CcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLREN-NVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||.|||++ +++||||||+|||++.+. .+.++|||++...... ......++..|+|||...+. .
T Consensus 107 ~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~-~~kL~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~ 181 (333)
T cd06650 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSV 181 (333)
T ss_pred HHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC-CEEEeeCCcchhhhhh----ccccCCCCccccCHHHhcCCCCCc
Confidence 9999999999999985 799999999999997643 2444599987543322 11234567789999998765 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|+++|++ +..||..
T Consensus 182 ~~Dv-wslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 182 QSDI-WSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred HHHH-HHHHHHHHHHHHCCCCCCC
Confidence 7899 9999999999 6677763
No 112
>KOG4279|consensus
Probab=99.93 E-value=1.5e-25 Score=226.88 Aligned_cols=200 Identities=26% Similarity=0.367 Sum_probs=162.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCC--CHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKL--SEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l--~~~ 78 (477)
.+....|||-++.+. .+..+.+..|+.+.++|+|.|||+++|.+..++++-|.||-++||+|.++|+.. +++ ++.
T Consensus 598 ~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEs 675 (1226)
T KOG4279|consen 598 DTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNES 675 (1226)
T ss_pred cceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchh
Confidence 356678999886553 334467889999999999999999999999999999999999999999999763 566 788
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc--CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN--NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~--~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
.+..+.+||++||+|||++.|||||||-+|+|++- +-+|+ .|||.+++.-|-.. ...|..||.-||+||++..+
T Consensus 676 tm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKI--SDFGTsKRLAginP--~TETFTGTLQYMAPEvIDqG 751 (1226)
T KOG4279|consen 676 TMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKI--SDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDQG 751 (1226)
T ss_pred HHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEe--cccccchhhccCCc--cccccccchhhhChHhhccC
Confidence 99999999999999999999999999999999974 55555 49999988777543 34578899999999998765
Q ss_pred -----CcccccCcceEEEEEE--eeecccccccc-------------CCCCCcchHHHHHHHHHHhhhhhhc
Q psy6508 157 -----TSLEYQRSKGELYVEF--KFAPFASQIRT-------------GWLRDSEEKELGNHLKRALEPAVCR 208 (477)
Q Consensus 157 -----~~~Di~~s~G~il~e~--~~~Pf~~~~r~-------------~~~~~~~~~~l~~~i~~~l~~~i~~ 208 (477)
.++|| ||+||+++|| |.+||..-+.+ +..+..-..+-..+|.++++|..+.
T Consensus 752 ~RGYG~aADI-WS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~ 822 (1226)
T KOG4279|consen 752 PRGYGKAADI-WSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCD 822 (1226)
T ss_pred CcCCCchhhh-hhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCccc
Confidence 77999 9999999999 78999754432 1233344556677788888777653
No 113
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.93 E-value=3e-26 Score=232.82 Aligned_cols=174 Identities=22% Similarity=0.280 Sum_probs=137.4
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-------- 73 (477)
++..||+|+++.... ....+.+.+|+.+++.+ +||||+++++++...+..++||||++||+|.+++....
T Consensus 64 ~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~ 142 (375)
T cd05104 64 AAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKH 142 (375)
T ss_pred cceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccc
Confidence 466899999875432 33456789999999999 89999999999999999999999999999999986421
Q ss_pred -------------------------------------------------------------------CCCHHHHHHHHHH
Q psy6508 74 -------------------------------------------------------------------KLSEFQCQQFVRQ 86 (477)
Q Consensus 74 -------------------------------------------------------------------~l~~~~~~~i~~q 86 (477)
.+++..+..++.|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 222 (375)
T cd05104 143 EDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQ 222 (375)
T ss_pred cchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHH
Confidence 3678889999999
Q ss_pred HHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---CcccccC
Q psy6508 87 LVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEYQR 163 (477)
Q Consensus 87 i~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~ 163 (477)
++.||.|||++||+||||||+|||++.+. .+.++|||++.............+..++..|+|||...+. .++|+ |
T Consensus 223 i~~~l~~lH~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi-~ 300 (375)
T cd05104 223 VAKGMSFLASKNCIHRDLAARNILLTHGR-ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV-W 300 (375)
T ss_pred HHHHHHHHHHCCeeccCCchhhEEEECCC-cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCH-H
Confidence 99999999999999999999999998653 3334599988654332211111222334569999998765 77899 9
Q ss_pred cceEEEEEE---eeecccc
Q psy6508 164 SKGELYVEF---KFAPFAS 179 (477)
Q Consensus 164 s~G~il~e~---~~~Pf~~ 179 (477)
|+|++++|+ +..||..
T Consensus 301 slG~~l~ellt~g~~p~~~ 319 (375)
T cd05104 301 SYGILLWEIFSLGSSPYPG 319 (375)
T ss_pred HHHHHHHHHHhcCCCCCCC
Confidence 999999997 4566653
No 114
>KOG0596|consensus
Probab=99.92 E-value=4.7e-26 Score=226.16 Aligned_cols=173 Identities=22% Similarity=0.356 Sum_probs=147.6
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCC-CCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEK-LSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~-l~~~~~ 80 (477)
+.+.||+|++...........-|.+|+..|.+| .|.+|+++|++-..++.+|||||+-+ .+|..+|++... ++...+
T Consensus 384 ~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~l 462 (677)
T KOG0596|consen 384 DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSIDPDWFL 462 (677)
T ss_pred CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCCchHHH
Confidence 456688888776666777778899999999999 59999999999999999999999876 899999988654 444689
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.++.|++.+++++|.+||||.||||.|+|+-.+.++++ |||++........-....+.+||..||+||.+...
T Consensus 463 k~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLI--DFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~ 540 (677)
T KOG0596|consen 463 KFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLI--DFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSR 540 (677)
T ss_pred HHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEee--eechhcccCccccceeeccccCcccccCHHHHhhccccc
Confidence 999999999999999999999999999999999877777 99999765544444455689999999999987533
Q ss_pred ----------CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----------TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----------~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+++|+ ||+|||+|+| +..||..
T Consensus 541 ~~~~~k~Ki~r~SDv-WSLGCILYqMvYgktPf~~ 574 (677)
T KOG0596|consen 541 ENGKSKIKISRKSDV-WSLGCILYQMVYGKTPFGQ 574 (677)
T ss_pred cCCCcceeecCccch-hhhhhHHHHHHhcCCchHH
Confidence 67899 9999999999 6688875
No 115
>TIGR03591 polynuc_phos polyribonucleotide nucleotidyltransferase. Members of this protein family are polyribonucleotide nucleotidyltransferase, also called polynucleotide phosphorylase. Some members have been shown also to have additional functions as guanosine pentaphosphate synthetase and as poly(A) polymerase (see model TIGR02696 for an exception clade, within this family).
Probab=99.92 E-value=2.5e-24 Score=230.47 Aligned_cols=274 Identities=17% Similarity=0.200 Sum_probs=215.3
Q ss_pred CCCCceeec---cCcceeecccccceecccCCcccccCCeEEEecc-ccccccCCCCCcccccCcceEEEEEEeeecccc
Q psy6508 104 LKPQNILIK---NNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV-FEPREIPSSKTSLEYQRSKGELYVEFKFAPFAS 179 (477)
Q Consensus 104 lkp~NIll~---~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~-y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~ 179 (477)
+-.+++-+| .+++|.+.+.+|+...++||++++.|+|++.|.+ ++||+.......... -..|.+++++.++||++
T Consensus 305 il~~g~R~DGR~~~e~Rpi~~~~g~l~~a~GSa~~~~G~Tqvl~~vt~g~~~~~~~~~~~~~-~~~~~~~~~y~~~pfs~ 383 (684)
T TIGR03591 305 ILKEGKRIDGRDLDTIRPISIEVGVLPRTHGSALFTRGETQALVVTTLGTERDEQIIDDLEG-EYRKRFMLHYNFPPYSV 383 (684)
T ss_pred HhcCCCCCCCCCCCCcCceEEEeCCCCCCCceEEEEeCCeEEEEEEecCCcccccCCcccCC-CccEEEEEEEEcCCCCC
Confidence 334555554 3689999999999999999999999999999999 799875322211111 23589999999999998
Q ss_pred ccccC-CCCCcchHHHHHHHHHHhhhhhhc-ccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEEEEEE
Q psy6508 180 QIRTG-WLRDSEEKELGNHLKRALEPAVCR-HEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTL 257 (477)
Q Consensus 180 ~~r~~-~~~~~~~~~l~~~i~~~l~~~i~~-~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~a~s~ 257 (477)
..++. ..+++++.+..+++++++++.+.. +.||++ |++.++||++||+...|+++|+++||+||||||+++|+|+|+
T Consensus 384 ~e~~~~g~~~rrei~~~~l~~ral~~~i~~~~~~p~t-I~v~~~VLesdGs~~~Aai~aaslAL~dAgvP~~~~Vagvs~ 462 (684)
T TIGR03591 384 GEVGRVGGPGRREIGHGALAERALKAVLPSEEEFPYT-IRVVSEILESNGSSSMASVCGGSLALMDAGVPIKAPVAGIAM 462 (684)
T ss_pred CCcCCCCCCChHHHHHHHHHHHHHHHhcCccccCCeE-EEEEEEEEeCCCChHHHHHHHHHHHHHhcCCCCcCCEEEEEE
Confidence 76653 356778888999999999998874 889964 999999999999999999999999999999999999999999
Q ss_pred EeeC-C----eEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEee---ecHHHHHHHHHHHHhcccch
Q psy6508 258 ALRG-G----LTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGT---IQQERLADHIEQLIGCCESL 329 (477)
Q Consensus 258 ~~~~-~----~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~---~~~~~~~~~l~~~~~~~~~i 329 (477)
++.+ + .+++||+..|+.. ++..++++ +..+.|+.++++++ ++.+.+.++++.|+++|..+
T Consensus 463 gli~~~~~~~~il~D~~~~Ed~~----------~d~d~~va--~t~~gI~~lq~d~k~~~i~~~~l~~al~~a~~~~~~I 530 (684)
T TIGR03591 463 GLIKEGDERFAVLSDILGDEDHL----------GDMDFKVA--GTRDGITALQMDIKIDGITREIMEQALEQAKEGRLHI 530 (684)
T ss_pred EEEcCCCcceEEEeCCChHHHhc----------CCceEEEE--EcCCceEEEEEEcCcCCcCHHHHHHHHHHHHHHHHHH
Confidence 9984 2 5999999999884 24555554 45566999999876 59999999999999999999
Q ss_pred hhHHHHhHhhhccccch--------------hhHHh--------hhcCcceeEEEEecCccceeeEeeeehhhhcccHHH
Q psy6508 330 CTDRVQKLVSDHVTLPE--------------RGRYV--------LNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVF 387 (477)
Q Consensus 330 ~~~~i~~~l~~~~~l~~--------------r~~~~--------~~~~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S~~f 387 (477)
.+. |++++.++..-+. +-..+ +.=-.-|.++|.+++++....+...+..+-..-..+
T Consensus 531 ~~~-m~~~l~~~~~~~~~~~p~~~~~~I~~~kI~~vIG~gGk~Ik~I~~~tg~~I~i~ddG~V~i~~~~~~~~~~a~~~I 609 (684)
T TIGR03591 531 LGE-MNKVISEPRAELSPYAPRIETIKINPDKIRDVIGPGGKVIREITEETGAKIDIEDDGTVKIAASDGEAAEAAIKMI 609 (684)
T ss_pred HHH-HHHHHhhhhccccccCCeEEEEecCHHHHHhhcCCCcHHHHHHHHHHCCEEEEecCeEEEEEECcHHHHHHHHHHH
Confidence 999 9999987754211 11111 221245677787877666666766777777777777
Q ss_pred HHhcC
Q psy6508 388 ATMFH 392 (477)
Q Consensus 388 ~~~f~ 392 (477)
..+..
T Consensus 610 ~~~~~ 614 (684)
T TIGR03591 610 EGITA 614 (684)
T ss_pred Hhhhc
Confidence 77654
No 116
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.92 E-value=3e-25 Score=216.06 Aligned_cols=174 Identities=21% Similarity=0.288 Sum_probs=140.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---------- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------- 72 (477)
+.+.||+|.++... .....+.+.+|+.++++++||||+++++++......|++|||+++++|.+++...
T Consensus 34 ~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~ 112 (283)
T cd05048 34 SATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAES 112 (283)
T ss_pred ceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCccccccc
Confidence 34679999986543 3445567999999999999999999999999989999999999999999999764
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecc
Q psy6508 73 ------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV 146 (477)
Q Consensus 73 ------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~ 146 (477)
..+++..+..++.|++.||.|||++|++||||||+||+++++. .+.+.|||.+................++..
T Consensus 113 ~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~-~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~ 191 (283)
T cd05048 113 GDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL-TVKISDFGLSRDIYSADYYRVQSKSLLPVR 191 (283)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCC-cEEECCCcceeeccccccccccCCCccccc
Confidence 3478889999999999999999999999999999999997653 344459998865433322233344556778
Q ss_pred ccccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 147 FEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 147 y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|+|||...+. .++|+ ||+|+++||+ +..||.+
T Consensus 192 y~aPE~~~~~~~~~~sDv-~slG~il~el~~~g~~p~~~ 229 (283)
T cd05048 192 WMPPEAILYGKFTTESDI-WSFGVVLWEIFSYGLQPYYG 229 (283)
T ss_pred ccCHHHhccCcCchhhhH-HHHHHHHHHHHcCCCCCCCC
Confidence 9999987654 67899 9999999998 4567654
No 117
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.92 E-value=5.3e-26 Score=217.72 Aligned_cols=174 Identities=22% Similarity=0.328 Sum_probs=145.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
.+++.|++|.+..........+.+.+|+.+++.++||||+++++.+...+..|++|||++|++|.+++... ..+++..
T Consensus 23 ~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 102 (256)
T cd08529 23 ADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQ 102 (256)
T ss_pred CCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHH
Confidence 46889999999877666666778999999999999999999999999999999999999999999999774 4689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++|+||||+||+++.+. .+.+.|||.......... ...+..++..|.|||...+.
T Consensus 103 ~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~-~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~ 179 (256)
T cd08529 103 VWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD-NVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYN 179 (256)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC-CEEEcccccceeccCccc--hhhccccCccccCHHHhcCCCCC
Confidence 999999999999999999999999999999998642 334458887764432211 12334567789999988766
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 180 ~~~Di-~slG~il~~l~~g~~p~~~ 203 (256)
T cd08529 180 EKSDV-WALGVVLYECCTGKHPFDA 203 (256)
T ss_pred Cccch-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6677764
No 118
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.92 E-value=5.9e-26 Score=220.86 Aligned_cols=173 Identities=17% Similarity=0.220 Sum_probs=138.8
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~ 78 (477)
.+|+.||+|.+....... .....+..|+.++++++||||+++++.+..+...|+||||++|++|.+++...+ .+++.
T Consensus 16 ~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~ 95 (277)
T cd05607 16 NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEME 95 (277)
T ss_pred cCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHH
Confidence 468999999987644322 223445679999999999999999999999999999999999999998886543 58899
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||+|||++|++||||||+||+++.+. .+.++|||.+....... ......++..|+|||...+.
T Consensus 96 ~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~-~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~ 171 (277)
T cd05607 96 RVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG-NCRLSDLGLAVELKDGK---TITQRAGTNGYMAPEILKEEPY 171 (277)
T ss_pred HHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC-CEEEeeceeeeecCCCc---eeeccCCCCCccCHHHHccCCC
Confidence 9999999999999999999999999999999997643 23345999876543211 11223466789999988665
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 172 ~~~~Dv-wslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 172 SYPVDW-FAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred CCchhH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6678764
No 119
>KOG0662|consensus
Probab=99.92 E-value=1.3e-25 Score=193.94 Aligned_cols=190 Identities=29% Similarity=0.419 Sum_probs=159.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~~ 80 (477)
++++.||+|.++.....+.......+|+-+|+.++|.||++++++.-.++.+-+|+|||. .+|..+... ++.++...+
T Consensus 25 ~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd-qdlkkyfdslng~~d~~~~ 103 (292)
T KOG0662|consen 25 ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSLNGDLDPEIV 103 (292)
T ss_pred CccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-HHHHHHHHhcCCcCCHHHH
Confidence 578899999998877666666678899999999999999999999999999999999997 799988876 567999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+.++.|++.||.|+|++++.|||+||+|++|+. +++++. |||+++ +.|-.. .--...+.|.||.||.++.+.
T Consensus 104 rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkla--dfglar-afgipv-rcysaevvtlwyrppdvlfgakly 179 (292)
T KOG0662|consen 104 RSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLA--DFGLAR-AFGIPV-RCYSAEVVTLWYRPPDVLFGAKLY 179 (292)
T ss_pred HHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEec--ccchhh-hcCCce-EeeeceeeeeeccCcceeeeeehh
Confidence 999999999999999999999999999999976 466665 999884 444332 223467899999999999887
Q ss_pred -CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHHHHh
Q psy6508 157 -TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRAL 202 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~~~l 202 (477)
.+.|+ ||.||++.|+. ..+|+.+++..-..++.++.+..-
T Consensus 180 ~tsidm-wsagcifaela-----nagrplfpg~dvddqlkrif~~lg 220 (292)
T KOG0662|consen 180 STSIDM-WSAGCIFAELA-----NAGRPLFPGNDVDDQLKRIFRLLG 220 (292)
T ss_pred ccchHh-hhcchHHHHHh-----hcCCCCCCCCcHHHHHHHHHHHhC
Confidence 77899 99999999883 245566667777788888877543
No 120
>KOG1026|consensus
Probab=99.92 E-value=3.1e-25 Score=231.53 Aligned_cols=174 Identities=24% Similarity=0.329 Sum_probs=150.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
+...||||.++... +.+.+++|++|+.++..|+|||||+++|+|..++++|+|+|||..|+|.++|..+.
T Consensus 515 ~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g 593 (774)
T KOG1026|consen 515 DEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASG 593 (774)
T ss_pred cceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCC
Confidence 45679999986553 45577899999999999999999999999999999999999999999999996532
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccc
Q psy6508 74 -----KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFE 148 (477)
Q Consensus 74 -----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ 148 (477)
+++..+...|+.||+.|+.||-++.+|||||-.+|+||.++ +.+++.|||+++...++-|+..+......-.||
T Consensus 594 ~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~-l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWM 672 (774)
T KOG1026|consen 594 QDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN-LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWM 672 (774)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc-eEEEecccccchhhhhhhhhcccCCceeeeecC
Confidence 27889999999999999999999999999999999999876 334446999999999999988775555666799
Q ss_pred ccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 149 PREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 149 ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|||.+.-+ ..+|+ ||+|+++||+ |.-|+.+
T Consensus 673 ppEsIly~kFTteSDV-Ws~GVvLWEIFsyG~QPy~g 708 (774)
T KOG1026|consen 673 PPESILYGKFTTESDV-WSFGVVLWEIFSYGKQPYYG 708 (774)
T ss_pred CHHHhhcCcccchhhh-hhhhhhhhhhhccccCcccc
Confidence 99988755 78999 9999999999 5567665
No 121
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=4.1e-26 Score=239.44 Aligned_cols=176 Identities=23% Similarity=0.260 Sum_probs=144.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC--------eEEEEEecCCCCCHHHHHHhC-
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER--------YVYIILEYCDGGDLCSFIRSH- 72 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--------~~~lv~e~~~g~sL~~~l~~~- 72 (477)
.+|+.||||++.....+......+.+|+.++..++|+||++++..+.... .+++||||+++|+|.+++...
T Consensus 55 ~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~ 134 (496)
T PTZ00283 55 SDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRA 134 (496)
T ss_pred CCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhh
Confidence 47899999999887766666778999999999999999999988765332 378999999999999998653
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccc
Q psy6508 73 ---EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEP 149 (477)
Q Consensus 73 ---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~p 149 (477)
..+++..+..++.|++.||.|||++||+||||||+|||++.+. .+.++|||++...........+.+..+++.|+|
T Consensus 135 ~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~-~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~a 213 (496)
T PTZ00283 135 KTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG-LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVA 213 (496)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC-CEEEEecccCeeccccccccccccccCCcceeC
Confidence 3689999999999999999999999999999999999997643 344459999865443222233445678889999
Q ss_pred cccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 150 REIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 150 pE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
||...+. .++|+ ||+|+++||+ +..||.+
T Consensus 214 PE~~~~~~~s~k~DV-wSlGvilyeLltG~~Pf~~ 247 (496)
T PTZ00283 214 PEIWRRKPYSKKADM-FSLGVLLYELLTLKRPFDG 247 (496)
T ss_pred HHHhCCCCCCcHHHH-HHHHHHHHHHHHCCCCCCC
Confidence 9998765 67899 9999999999 6678764
No 122
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.92 E-value=3.6e-25 Score=216.30 Aligned_cols=173 Identities=18% Similarity=0.242 Sum_probs=140.6
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~ 78 (477)
.+++.||+|++....... .....+.+|+.+++.++||||+++++.+..++..|++|||++|++|.+++... ..+++.
T Consensus 23 ~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 102 (285)
T cd05605 23 ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEE 102 (285)
T ss_pred CCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHH
Confidence 468899999987654332 23355788999999999999999999999999999999999999999888653 368999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++|++||||||+||+++++. .+.++|||.+....... ......++..|+|||...+.
T Consensus 103 ~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~ 178 (285)
T cd05605 103 RAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG-HIRISDLGLAVEIPEGE---TIRGRVGTVGYMAPEVVKNERY 178 (285)
T ss_pred HHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC-CEEEeeCCCceecCCCC---ccccccCCCCccCcHHhcCCCC
Confidence 9999999999999999999999999999999997643 33445999875432111 11234677889999998655
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 179 ~~~~Di-ws~G~~l~el~~g~~pf~~ 203 (285)
T cd05605 179 TFSPDW-WGLGCLIYEMIEGKSPFRQ 203 (285)
T ss_pred Cccccc-hhHHHHHHHHHHCCCCCCC
Confidence 66899 9999999999 6788864
No 123
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.92 E-value=4.5e-25 Score=211.16 Aligned_cols=174 Identities=24% Similarity=0.361 Sum_probs=138.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~ 80 (477)
.+++.||+|.+.... ..+....+.+|+.++++++||||+++++++..+...|+||||+++++|.+++...+ .+++..+
T Consensus 18 ~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 96 (252)
T cd05084 18 ADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKEL 96 (252)
T ss_pred cCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHH
Confidence 468899999876443 34455679999999999999999999999999999999999999999999997643 6899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+...........+........|+|||...+. .
T Consensus 97 ~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 175 (252)
T cd05084 97 IQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN-VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSS 175 (252)
T ss_pred HHHHHHHHHHHHHHHhCCccccccchheEEEcCCC-cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCCh
Confidence 99999999999999999999999999999997653 3445699987654332221112222223469999987655 6
Q ss_pred cccccCcceEEEEEE---eeeccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
++|+ |++|+++|++ +..||.
T Consensus 176 ~~Dv-~slG~il~e~~~~~~~p~~ 198 (252)
T cd05084 176 ESDV-WSFGILLWEAFSLGAVPYA 198 (252)
T ss_pred HHHH-HHHHHHHHHHHhCCCCCcc
Confidence 7899 9999999997 445564
No 124
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.92 E-value=3.5e-25 Score=215.14 Aligned_cols=174 Identities=23% Similarity=0.303 Sum_probs=141.1
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
+++.||+|.++... ..+..+.+.+|+.+++.++||||+++++++......|++|||++|++|.+++...+
T Consensus 34 ~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 112 (280)
T cd05049 34 DKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSP 112 (280)
T ss_pred CcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhccc
Confidence 46789999986543 23345789999999999999999999999999999999999999999999997642
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccc
Q psy6508 74 -----KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFE 148 (477)
Q Consensus 74 -----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ 148 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+.......+........++..|+
T Consensus 113 ~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~-~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~ 191 (280)
T cd05049 113 DSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL-VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWM 191 (280)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC-eEEECCcccceecccCcceecCCCCcccceec
Confidence 378889999999999999999999999999999999997652 34445999876543333323333445567899
Q ss_pred ccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 149 PREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 149 ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|||...+. .++|+ ||+|+++||+ +..||.+
T Consensus 192 aPE~~~~~~~~~~~Di-~slG~il~e~~~~g~~p~~~ 227 (280)
T cd05049 192 PPESIMYRKFTTESDV-WSFGVVLWEIFTYGKQPWYG 227 (280)
T ss_pred ChhhhccCCcchhhhH-HHHHHHHHHHHhcCCCCCCC
Confidence 99988765 67899 9999999998 4567653
No 125
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.92 E-value=6.2e-25 Score=211.28 Aligned_cols=176 Identities=24% Similarity=0.335 Sum_probs=143.5
Q ss_pred CCCcEEEEEEcccCCCCh---hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE---NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
++++.||+|.+....... ...+.+.+|+.++++++||||+++++++..+...++++||++|++|.+++...+.+++.
T Consensus 25 ~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~ 104 (263)
T cd06625 25 DTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTET 104 (263)
T ss_pred CCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHH
Confidence 468899999987654322 23457889999999999999999999999999999999999999999999887789999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccC-CeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQG-NTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g-~t~v~~~~y~ppE~~~~~- 156 (477)
.+..++.|++.||.|||+.|++||||+|+||+++.+. ++.++|||.+...........+ ....++..|.|||...+.
T Consensus 105 ~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 183 (263)
T cd06625 105 VTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG-NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEG 183 (263)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEEEeecccceeccccccccccccCCCcCccccCcceeccCC
Confidence 9999999999999999999999999999999998642 3445599987644322111111 223456789999998766
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 184 ~~~~~Di-~slG~il~el~~g~~p~~~ 209 (263)
T cd06625 184 YGRKADV-WSVGCTVVEMLTEKPPWAE 209 (263)
T ss_pred CCchhhh-HHHHHHHHHHHhCCCCccc
Confidence 67899 9999999999 6677754
No 126
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.92 E-value=4.6e-25 Score=219.85 Aligned_cols=176 Identities=16% Similarity=0.222 Sum_probs=139.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
++|+.||+|.++.........+.+.+|+.+++.++||||+++++++..++..|+||||+++++|.+++..+ +.+++..
T Consensus 23 ~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~ 102 (327)
T cd08227 23 PTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELA 102 (327)
T ss_pred ccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHH
Confidence 57899999999876655555567889999999999999999999999999999999999999999999753 3589999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceeccc--CCccc---ccCCeEEEeccccccccCC
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAK--GSAYI---EQGNTKVICSVFEPREIPS 154 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~--gs~~~---~~g~t~v~~~~y~ppE~~~ 154 (477)
++.++.|++.||.|||++||+||||||+||+++.+. ++...||+...... +.... .......++..|+|||...
T Consensus 103 ~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 181 (327)
T cd08227 103 IAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG-KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQ 181 (327)
T ss_pred HHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC-cEEEcccchhhccccccccccccccccccccceecccChHHhh
Confidence 999999999999999999999999999999997643 23334666433211 11100 0112234556799999876
Q ss_pred CC-----CcccccCcceEEEEEE--eeecccc
Q psy6508 155 SK-----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 155 ~~-----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+. .++|+ ||+|++++|+ +..||..
T Consensus 182 ~~~~~~~~~~Di-wslG~il~el~~g~~pf~~ 212 (327)
T cd08227 182 QNLQGYDAKSDI-YSVGITACELANGHVPFKD 212 (327)
T ss_pred cccCCCCchhhH-HHHHHHHHHHHHCCCCCCC
Confidence 42 67899 9999999999 7788863
No 127
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.92 E-value=3.3e-25 Score=214.22 Aligned_cols=173 Identities=20% Similarity=0.211 Sum_probs=138.0
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~ 81 (477)
.+..||+|.++... +....+.+.+|+.++++++||||+++++++..++..++||||+++++|.+++... ..+++..++
T Consensus 32 ~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~ 110 (266)
T cd05064 32 RELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLM 110 (266)
T ss_pred ceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHH
Confidence 46689999987653 3344567899999999999999999999999999999999999999999999774 478999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.+. .....|||.......... ........+..|+|||...+. .+
T Consensus 111 ~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~-~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~ 188 (266)
T cd05064 111 GMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL-VCKISGFRRLQEDKSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSA 188 (266)
T ss_pred HHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC-cEEECCCcccccccccch-hcccCCCCceeecCHHHHhhCCccch
Confidence 9999999999999999999999999999997653 344468987654322211 111122234579999987654 67
Q ss_pred ccccCcceEEEEEE---eeecccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
+|+ ||+|+++||+ +..||..
T Consensus 189 ~Di-~slG~~l~ell~~g~~p~~~ 211 (266)
T cd05064 189 SDV-WSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred hHH-HHHHHHHHHHhcCCCCCcCc
Confidence 899 9999999994 5677753
No 128
>PRK11824 polynucleotide phosphorylase/polyadenylase; Provisional
Probab=99.92 E-value=6.1e-24 Score=228.13 Aligned_cols=230 Identities=20% Similarity=0.277 Sum_probs=188.0
Q ss_pred cEEccCCCCceeecc---CcceeecccccceecccCCcccccCCeEEEecc-ccccccCCCCCcccccCcceEEEEEEee
Q psy6508 99 VCHFDLKPQNILIKN---NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV-FEPREIPSSKTSLEYQRSKGELYVEFKF 174 (477)
Q Consensus 99 ivHrDlkp~NIll~~---~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~-y~ppE~~~~~~~~Di~~s~G~il~e~~~ 174 (477)
++-.-|-.+++-+|. +++|.+.+.+|+...++||++++.|+|++.|.+ ++||........... -..|.+++++.+
T Consensus 304 ~~r~~il~~g~R~DGR~~~e~Rpi~~~~g~l~~a~GSal~~~G~T~Vl~~vt~g~~~~~~~~~~~~~-~~~~~~~~~y~~ 382 (693)
T PRK11824 304 IVRRRILEEGIRIDGRKLDEIRPISIEVGVLPRTHGSALFTRGETQALVVATLGTLRDEQIIDGLEG-EYKKRFMLHYNF 382 (693)
T ss_pred HHHHHHhcCCCCCCCCCcCcccceEEEeCCCCCCCceEEEEECCeEEEEEEecCCCcccccccccCC-CCcEEEEEEEEc
Confidence 333344455666653 689999999999999999999999999999999 788653222100011 246899999999
Q ss_pred ecccccccc-CCCCCcchHHHHHHHHHHhhhhhhc-ccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceE
Q psy6508 175 APFASQIRT-GWLRDSEEKELGNHLKRALEPAVCR-HEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLV 252 (477)
Q Consensus 175 ~Pf~~~~r~-~~~~~~~~~~l~~~i~~~l~~~i~~-~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v 252 (477)
+||++..+. ...+++++.+..+.+++++++.+.. +.||. .|++.++||++||+...|+++|+++||+||||||+++|
T Consensus 383 ~pfs~~e~~~~~~~~rre~~~~~li~ral~~vi~~~~~~p~-~I~v~~~VLe~dGs~~~Aai~aaslAL~dAgvP~~~~V 461 (693)
T PRK11824 383 PPYSVGETGRVGSPGRREIGHGALAERALEPVLPSEEEFPY-TIRVVSEILESNGSSSMASVCGSSLALMDAGVPIKAPV 461 (693)
T ss_pred CCCCCCCcCCCCCCChhHHHHHHHHHHHHHHhcCcccCCCE-EEEEEEEEEecCCCHHHHHHHHHHHHHHhcCCCccCce
Confidence 999976653 3346777888999999999999986 78996 79999999999999999999999999999999999999
Q ss_pred EEEEEEeeC-C---eEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEee---ecHHHHHHHHHHHHhc
Q psy6508 253 TSSTLALRG-G---LTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGT---IQQERLADHIEQLIGC 325 (477)
Q Consensus 253 ~a~s~~~~~-~---~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~---~~~~~~~~~l~~~~~~ 325 (477)
+|+|+++.+ + .+++||+..|+.. ++..++++ ...+.|+.++++|+ ++.+.+.++++.|.++
T Consensus 462 a~vs~gli~~~~~~~il~D~~~~Ed~~----------~d~d~~va--~t~~gi~~lq~d~k~~~i~~~~l~~al~~a~~g 529 (693)
T PRK11824 462 AGIAMGLIKEGDKYAVLTDILGDEDHL----------GDMDFKVA--GTRDGITALQMDIKIDGITREILEEALEQAKEG 529 (693)
T ss_pred eEEEEEEEcCCCceEEEcCCChhhHhh----------CCceEEEE--ecCCceEEEEEecccCCcCHHHHHHHHHHHHHH
Confidence 999999984 3 3899999999884 35556665 44556999998876 5999999999999999
Q ss_pred ccchhhHHHHhHhhhccc
Q psy6508 326 CESLCTDRVQKLVSDHVT 343 (477)
Q Consensus 326 ~~~i~~~~i~~~l~~~~~ 343 (477)
|..+.+. |.+.+.....
T Consensus 530 ~~~I~~~-M~~aI~~~r~ 546 (693)
T PRK11824 530 RLHILGK-MNEAISEPRA 546 (693)
T ss_pred HHHHHHH-HHHHhcCChh
Confidence 9999999 9998865543
No 129
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.92 E-value=8.8e-25 Score=209.93 Aligned_cols=175 Identities=19% Similarity=0.253 Sum_probs=139.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++++.||+|+++.........+.+.+|+.+++.++||||+++++++. ....+++|||+++++|.+++...+.+++..+.
T Consensus 20 ~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 98 (257)
T cd05116 20 KSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNIT 98 (257)
T ss_pred CCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHH
Confidence 46788999998766555556678999999999999999999999875 45679999999999999999887789999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc-ccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI-EQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~-~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||+|||++|++||||||.||+++.+. .+.+.|||.+......... .......++..|+|||..... .
T Consensus 99 ~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 177 (257)
T cd05116 99 ELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH-YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSS 177 (257)
T ss_pred HHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC-eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCc
Confidence 9999999999999999999999999999998753 3445699987643322111 111112224579999987654 5
Q ss_pred cccccCcceEEEEEE---eeecccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
++|+ ||+|+++||+ +..||..
T Consensus 178 ~~Di-~slG~~l~el~t~g~~p~~~ 201 (257)
T cd05116 178 KSDV-WSFGVLMWEAFSYGQKPYKG 201 (257)
T ss_pred hhHH-HHHHHHHHHHHhCCCCCCCC
Confidence 7899 9999999997 4567764
No 130
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.92 E-value=8.2e-25 Score=213.94 Aligned_cols=173 Identities=24% Similarity=0.348 Sum_probs=139.5
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
++..||+|.+... .....+.+.+|+.++++++||||+++++++...+.+|++|||+++++|.+++...+
T Consensus 34 ~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 111 (288)
T cd05093 34 DKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 111 (288)
T ss_pred cceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCcccccccc
Confidence 4566899988644 34455679999999999999999999999999999999999999999999997543
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccc
Q psy6508 74 ----KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEP 149 (477)
Q Consensus 74 ----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~p 149 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++++. .+...|||.+...........+....++..|+|
T Consensus 112 ~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a 190 (288)
T cd05093 112 NRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL-LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP 190 (288)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC-cEEeccCCccccccCCceeecCCCCCccccccC
Confidence 389999999999999999999999999999999999997653 344459998765443332223333344567999
Q ss_pred cccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 150 REIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 150 pE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
||...+. .++|+ ||+|+++++| +..||.+
T Consensus 191 PE~~~~~~~~~~sDi-wslG~il~~l~t~g~~p~~~ 225 (288)
T cd05093 191 PESIMYRKFTTESDV-WSLGVVLWEIFTYGKQPWYQ 225 (288)
T ss_pred HHHhccCCCCchhhH-HHHHHHHHHHHhCCCCCCCC
Confidence 9988755 67999 9999999998 3466653
No 131
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.92 E-value=3.5e-25 Score=221.28 Aligned_cols=175 Identities=22% Similarity=0.309 Sum_probs=140.5
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.+++.||+|++.+... .....+.+.+|+.++..++||||+++++.+.+.+.+|+||||++||+|.+++.+ ...+++..
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~ 103 (332)
T cd05623 24 NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDM 103 (332)
T ss_pred CCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHH
Confidence 4678899999865432 222344588999999999999999999999999999999999999999999977 35789999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC----
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS---- 155 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~---- 155 (477)
++.++.|++.||.|||++||+||||||+|||++.+. ++.++|||.+........ .......+++.|+|||+..+
T Consensus 104 ~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~-~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~ 181 (332)
T cd05623 104 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG-HIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDG 181 (332)
T ss_pred HHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC-CEEEeecchheecccCCc-ceecccccCccccCHHHHhccccC
Confidence 999999999999999999999999999999997542 344459998754321111 11123467889999998752
Q ss_pred ----CCcccccCcceEEEEEE--eeecccc
Q psy6508 156 ----KTSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ----~~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
..++|+ ||+|+++||+ +..||..
T Consensus 182 ~~~~~~~~Dv-wSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 182 KGKYGPECDW-WSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred CCCCCCcCCE-EeeHHHHHHHhcCCCCCCC
Confidence 167899 9999999999 6688864
No 132
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.92 E-value=1.8e-25 Score=242.46 Aligned_cols=175 Identities=22% Similarity=0.209 Sum_probs=140.9
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--------
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-------- 72 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-------- 72 (477)
.+|+.||+|+++..... +...+++.+|+.++++++||||+++++++.+++..|++|||++|++|.+++...
T Consensus 25 ~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e 104 (932)
T PRK13184 25 VCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSK 104 (932)
T ss_pred CCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccch
Confidence 46889999999765432 334567999999999999999999999999999999999999999999998642
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCc--------------c
Q psy6508 73 ---EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSA--------------Y 134 (477)
Q Consensus 73 ---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~--------------~ 134 (477)
..++...+..++.|++.||+|||++||+||||||+||+++.+ .++ .+|||.+....... .
T Consensus 105 ~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vK--LiDFGLAk~i~~~~~~~~~l~~~~~~s~~ 182 (932)
T PRK13184 105 ELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVV--ILDWGAAIFKKLEEEDLLDIDVDERNICY 182 (932)
T ss_pred hhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEE--EEecCcceecccccccccccccccccccc
Confidence 135567788999999999999999999999999999999764 444 45999886541110 0
Q ss_pred --cccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 135 --IEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 135 --~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.......++++.|+|||...+. .++|+ ||+|++++|| +..||..
T Consensus 183 s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDI-WSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 183 SSMTIPGKIVGTPDYMAPERLLGVPASESTDI-YALGVILYQMLTLSFPYRR 233 (932)
T ss_pred cccccCCCCCCCCCCCCHHHhcCCCCCcHhHH-HHHHHHHHHHHHCCCCCCC
Confidence 0111234688899999988765 67899 9999999999 6788864
No 133
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.92 E-value=2.3e-25 Score=213.55 Aligned_cols=174 Identities=22% Similarity=0.302 Sum_probs=145.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
++++.|++|.+.....+.....++.+|+.++++++||||+++++++.+++..+++|||+++++|.+++.+. ..+++..
T Consensus 23 ~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~ 102 (256)
T cd08221 23 EDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEM 102 (256)
T ss_pred CCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHH
Confidence 46889999998877666666778999999999999999999999999999999999999999999999775 3689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||+.|++||||+|+||+++.+. .+...|||.+....... ....+..++..|.|||...+.
T Consensus 103 ~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~-~~kl~d~~~~~~~~~~~--~~~~~~~~~~~y~ape~~~~~~~~ 179 (256)
T cd08221 103 VLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG-LIKLGDFGISKILGSEY--SMAETVVGTPYYMSPELCQGVKYN 179 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC-CEEECcCcceEEccccc--ccccccCCCccccCHhhcCCCCCC
Confidence 999999999999999999999999999999997643 34445999876543322 123455678889999987655
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 180 ~~~Dv-~slG~i~~~l~~g~~~~~~ 203 (256)
T cd08221 180 FKSDI-WALGCVLYELLTLKRTFDA 203 (256)
T ss_pred Ccchh-HHHHHHHHHHHHCCCCCCC
Confidence 56899 9999999999 5566653
No 134
>KOG0193|consensus
Probab=99.92 E-value=1.4e-25 Score=225.29 Aligned_cols=172 Identities=20% Similarity=0.331 Sum_probs=146.4
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQF 83 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i 83 (477)
..||||+++....+++..+.|++|+.++++-+|.||+-+.|++...+. .||+.||+|.+|+.+++-. .+|.....+.|
T Consensus 415 GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idI 493 (678)
T KOG0193|consen 415 GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDI 493 (678)
T ss_pred cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHH
Confidence 479999999999999999999999999999999999999999988776 9999999999999999764 36999999999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecc---cCCcccccCCeEEEeccccccccCCCC----
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA---KGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~---~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.|+++|+.|||.++|+|||||..|||+.++ .++++.|||++... .|..- -.+..+...|+|||+.+..
T Consensus 494 AqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~-~kVkIgDFGLatvk~~w~g~~q---~~qp~gsilwmAPEvIRmqd~nP 569 (678)
T KOG0193|consen 494 AQQIAQGMDYLHAKNIIHRDLKSNNIFLHED-LKVKIGDFGLATVKTRWSGEQQ---LEQPHGSLLWMAPEVIRMQDDNP 569 (678)
T ss_pred HHHHHHhhhhhhhhhhhhhhccccceEEccC-CcEEEecccceeeeeeeccccc---cCCCccchhhhcHHHHhhcccCC
Confidence 9999999999999999999999999999875 46666799998532 22211 1223344569999998765
Q ss_pred --CcccccCcceEEEEEE--eeeccccccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFASQIR 182 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~~~r 182 (477)
+.+|+ |++|+++||+ +-.||+...+
T Consensus 570 fS~qSDV-YaFGiV~YELltg~lPysi~~~ 598 (678)
T KOG0193|consen 570 FSFQSDV-YAFGIVWYELLTGELPYSIQNR 598 (678)
T ss_pred CCcccch-hhhhHHHHHHHhCcCCcCCCCh
Confidence 77999 9999999999 7789985544
No 135
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.92 E-value=6.5e-25 Score=221.22 Aligned_cols=168 Identities=23% Similarity=0.311 Sum_probs=136.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+|+.||||++.... .....+.+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+. ...++..+.
T Consensus 97 ~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~ 171 (353)
T PLN00034 97 PTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLA 171 (353)
T ss_pred CCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHH
Confidence 468999999986543 334456789999999999999999999999999999999999999998653 346778889
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-----
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK----- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~----- 156 (477)
.++.||+.||.|||++||+||||||+|||++.+. ++.++|||++....... ....+.+++..|+|||.+...
T Consensus 172 ~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~ 248 (353)
T PLN00034 172 DVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK-NVKIADFGVSRILAQTM--DPCNSSVGTIAYMSPERINTDLNHGA 248 (353)
T ss_pred HHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-CEEEcccccceeccccc--ccccccccCccccCccccccccccCc
Confidence 9999999999999999999999999999997653 34445999876543221 112345788899999987432
Q ss_pred ---CcccccCcceEEEEEE--eeeccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|+++||+ +..||.
T Consensus 249 ~~~~~~Dv-wslGvil~el~~g~~pf~ 274 (353)
T PLN00034 249 YDGYAGDI-WSLGVSILEFYLGRFPFG 274 (353)
T ss_pred CCCcchhH-HHHHHHHHHHHhCCCCCC
Confidence 46899 9999999998 667776
No 136
>KOG0577|consensus
Probab=99.92 E-value=2.2e-25 Score=222.32 Aligned_cols=168 Identities=22% Similarity=0.363 Sum_probs=144.5
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~ 79 (477)
.+...||||++..... +.+.++++.+|+..|++++|||++.+-++|..+...|||||||- |+-.+++.-+ +++.+.+
T Consensus 49 ~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleVhkKplqEvE 127 (948)
T KOG0577|consen 49 RNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVE 127 (948)
T ss_pred CccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHHHhccchHHH
Confidence 5778999999987754 45778999999999999999999999999999999999999997 7888888654 4799999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
+..|..+.+.||.|||+.+.+|||||..|||+++. -+++ .|||.++... ..++.+|||.||+||++...
T Consensus 128 IAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKL--aDFGSAsi~~------PAnsFvGTPywMAPEVILAMDE 199 (948)
T KOG0577|consen 128 IAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKL--ADFGSASIMA------PANSFVGTPYWMAPEVILAMDE 199 (948)
T ss_pred HHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeee--ccccchhhcC------chhcccCCccccchhHheeccc
Confidence 99999999999999999999999999999999764 4444 5999875443 34689999999999998643
Q ss_pred ----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
-++|+ ||+|++.+|+ ..+|+..
T Consensus 200 GqYdgkvDv-WSLGITCIELAERkPPlFn 227 (948)
T KOG0577|consen 200 GQYDGKVDV-WSLGITCIELAERKPPLFN 227 (948)
T ss_pred cccCCccce-eeccchhhhhhhcCCCccC
Confidence 67999 9999999999 4455543
No 137
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.92 E-value=6e-25 Score=224.22 Aligned_cols=164 Identities=16% Similarity=0.230 Sum_probs=135.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.... ..+.+|+.++++++||||+++++++..+...++++|++. ++|..++.....+++..++
T Consensus 115 ~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~ 185 (391)
T PHA03212 115 KTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKRNIAICDIL 185 (391)
T ss_pred CCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcCCCCHHHHH
Confidence 4788999997432 346789999999999999999999999999999999996 7999999887789999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||.|||++||+||||||+|||++.+ .++ ++|||++....... .....+..+++.|+|||+..+. .
T Consensus 186 ~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vk--L~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ 262 (391)
T PHA03212 186 AIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVC--LGDFGAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYGP 262 (391)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEE--EEeCCccccccccc-ccccccccCccCCCChhhhcCCCCCc
Confidence 999999999999999999999999999999764 444 45999875322111 0112245688999999998765 6
Q ss_pred cccccCcceEEEEEE--eeeccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
++|+ ||+|+++||+ +..||.
T Consensus 263 ~~Di-wSlGvil~elltg~~p~~ 284 (391)
T PHA03212 263 AVDI-WSAGIVLFEMATCHDSLF 284 (391)
T ss_pred HHHH-HHHHHHHHHHHHCCCCcC
Confidence 7899 9999999999 555655
No 138
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.92 E-value=7.7e-25 Score=212.75 Aligned_cols=174 Identities=21% Similarity=0.288 Sum_probs=138.0
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
+++.||+|++.... ......++.+|+.+++.++||||+++++++..++..++||||+++++|.+++.+..
T Consensus 35 ~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 113 (277)
T cd05062 35 PETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQ 113 (277)
T ss_pred ceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccc
Confidence 45679999986443 23345678999999999999999999999999999999999999999999997532
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 74 -KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 74 -~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++++. ++..+|||.+...........+....++..|+|||.
T Consensus 114 ~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 192 (277)
T cd05062 114 APPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 192 (277)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCC-CEEECCCCCccccCCcceeecCCCCccCHhhcChhH
Confidence 256778899999999999999999999999999999998643 445569998765433333223333344567999998
Q ss_pred CCCC---CcccccCcceEEEEEEe---eecccc
Q psy6508 153 PSSK---TSLEYQRSKGELYVEFK---FAPFAS 179 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~~---~~Pf~~ 179 (477)
..+. .++|+ ||+|+++||+. ..||.+
T Consensus 193 ~~~~~~~~~~Di-~slG~~l~el~~~~~~p~~~ 224 (277)
T cd05062 193 LKDGVFTTYSDV-WSFGVVLWEIATLAEQPYQG 224 (277)
T ss_pred hhcCCcCchhHH-HHHHHHHHHHHcCCCCCCCC
Confidence 7655 67899 99999999983 456653
No 139
>KOG0574|consensus
Probab=99.92 E-value=1.9e-25 Score=206.85 Aligned_cols=171 Identities=22% Similarity=0.376 Sum_probs=148.7
Q ss_pred CCCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 1 ~~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
+++|..||||.++.+ ...+++.+|+.+++++..|++|++|+.+.....+|||||||..|+..+.++- ++++++.+
T Consensus 55 ~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~E 130 (502)
T KOG0574|consen 55 RESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQE 130 (502)
T ss_pred hccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHH
Confidence 368999999998765 3567899999999999999999999999888899999999999999999875 45799999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
+..+++..+.||+|||...-+|||||..|||++.+ -.++ .|||++......- ...+|.++|+.||+||++..-
T Consensus 131 Is~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKL--ADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVI~EIGY 206 (502)
T KOG0574|consen 131 ISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKL--ADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIEEIGY 206 (502)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhh--hhccccchhhhhH--HhhCccccCcccccHHHHHHhcc
Confidence 99999999999999999999999999999999764 4444 5999987655432 345789999999999998654
Q ss_pred -CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
..+|| ||+|++..|| |.+||+.-
T Consensus 207 ~~~ADI-WSLGITaIEMAEG~PPYsDI 232 (502)
T KOG0574|consen 207 DTKADI-WSLGITAIEMAEGRPPYSDI 232 (502)
T ss_pred chhhhH-hhhcchhhhhhcCCCCcccc
Confidence 77899 9999999999 88888864
No 140
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.92 E-value=9.5e-25 Score=213.69 Aligned_cols=171 Identities=26% Similarity=0.451 Sum_probs=143.2
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
++++.||+|+++..... ....+.+.+|+.++++++||||+++++.+..++..|++|||+++++|.+++...+.+++..+
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~ 103 (290)
T cd05580 24 GSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVA 103 (290)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHH
Confidence 46889999998765432 34456789999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++|++||||+|.||+++.+. ++.+.|||.+...... .....++..|+|||...+. .
T Consensus 104 ~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~-~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~ 177 (290)
T cd05580 104 RFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG-YIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGK 177 (290)
T ss_pred HHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC-CEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCc
Confidence 99999999999999999999999999999997653 2344599987654433 1233456789999987655 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ |++|++++++ +..||..
T Consensus 178 ~~Di-~slG~il~~l~~g~~p~~~ 200 (290)
T cd05580 178 AVDW-WALGILIYEMLAGYPPFFD 200 (290)
T ss_pred cccH-HHHHHHHHHHHhCCCCCCC
Confidence 7899 9999999999 6677764
No 141
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.91 E-value=1.5e-25 Score=216.11 Aligned_cols=177 Identities=21% Similarity=0.330 Sum_probs=144.6
Q ss_pred CCCcEEEEEEcccCCCC----hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVS----ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~----~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~ 77 (477)
.+++.||+|+++..... ....+.+.+|+.++++++||||+++++++...+..++++||++|++|.+++.+.+.+++
T Consensus 23 ~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~ 102 (268)
T cd06630 23 KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKE 102 (268)
T ss_pred CCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCH
Confidence 57889999998755422 12356789999999999999999999999999999999999999999999988788999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc--ccCCeEEEeccccccccCCC
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI--EQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~--~~g~t~v~~~~y~ppE~~~~ 155 (477)
..+..++.|++.||.|||++|++|+||+|+||+++.++..+.++|||.+......... .......++..|.|||...+
T Consensus 103 ~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~ 182 (268)
T cd06630 103 AVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG 182 (268)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhcc
Confidence 9999999999999999999999999999999999876545556699987544322110 01123456678999998765
Q ss_pred C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ |++|++++++ +..||..
T Consensus 183 ~~~~~~~Dv-~slG~~l~~l~~g~~p~~~ 210 (268)
T cd06630 183 EQYGRSCDV-WSVGCVIIEMATAKPPWNA 210 (268)
T ss_pred CCCCcccch-HHHHHHHHHHHhCCCCCCC
Confidence 5 67899 9999999999 6677753
No 142
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.91 E-value=1.9e-25 Score=231.35 Aligned_cols=167 Identities=23% Similarity=0.401 Sum_probs=132.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--------CeEEEEEecCCCCCHHHHHHh--
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--------RYVYIILEYCDGGDLCSFIRS-- 71 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--------~~~~lv~e~~~g~sL~~~l~~-- 71 (477)
.+++.||||++.... ....+|+.+|+.++||||+++++++... ..+++||||++ ++|.+++..
T Consensus 89 ~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~ 161 (440)
T PTZ00036 89 DTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYA 161 (440)
T ss_pred CCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHh
Confidence 468899999885432 1234799999999999999999876432 25789999998 688777653
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccc
Q psy6508 72 --HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEP 149 (477)
Q Consensus 72 --~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~p 149 (477)
...+++..++.++.|++.||.|||++||+||||||+|||++.+...+.++|||++....... ...+.++++.|+|
T Consensus 162 ~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~---~~~~~~~t~~y~a 238 (440)
T PTZ00036 162 RNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ---RSVSYICSRFYRA 238 (440)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC---CcccCCCCcCccC
Confidence 35799999999999999999999999999999999999998655445556999986543221 1123466788999
Q ss_pred cccCCCC----CcccccCcceEEEEEE--eeecccc
Q psy6508 150 REIPSSK----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 150 pE~~~~~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
||...+. .++|+ ||+|+++||| |.+||.+
T Consensus 239 PE~~~~~~~~~~~~Di-wSlGvil~elltG~~pf~~ 273 (440)
T PTZ00036 239 PELMLGATNYTTHIDL-WSLGCIIAEMILGYPIFSG 273 (440)
T ss_pred HHHhcCCCCCCcHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 9987553 67899 9999999999 7788874
No 143
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.91 E-value=1.6e-25 Score=228.81 Aligned_cols=173 Identities=23% Similarity=0.331 Sum_probs=136.6
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----------
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---------- 72 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------- 72 (477)
+..||||+++... .....+.+.+|+.+|+++. ||||+++++++...+..|+|||||++|+|.+++...
T Consensus 67 ~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~ 145 (400)
T cd05105 67 VMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPE 145 (400)
T ss_pred ceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccc
Confidence 4579999986543 3344567999999999995 999999999999999999999999999999998642
Q ss_pred --------------------------------------------------------------------------------
Q psy6508 73 -------------------------------------------------------------------------------- 72 (477)
Q Consensus 73 -------------------------------------------------------------------------------- 72 (477)
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 225 (400)
T cd05105 146 KPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNL 225 (400)
T ss_pred cccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHH
Confidence
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecc
Q psy6508 73 ------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV 146 (477)
Q Consensus 73 ------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~ 146 (477)
..+++..+..++.|++.||.|||++|++||||||+||+++.+. .+.++|||++.............+..++..
T Consensus 226 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~-~~kL~DfGla~~~~~~~~~~~~~~~~~~~~ 304 (400)
T cd05105 226 LSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK-IVKICDFGLARDIMHDSNYVSKGSTFLPVK 304 (400)
T ss_pred HHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC-EEEEEeCCcceeccccccccccCCcCCCcc
Confidence 1367788899999999999999999999999999999998753 344569998765432211111223345567
Q ss_pred ccccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 147 FEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 147 y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|+|||...+. .++|+ ||+|+++||+ +..||..
T Consensus 305 y~aPE~~~~~~~~~~~Di-wSlGvil~ellt~g~~P~~~ 342 (400)
T cd05105 305 WMAPESIFDNLYTTLSDV-WSYGILLWEIFSLGGTPYPG 342 (400)
T ss_pred eEChhhhcCCCCCchhhH-HHHHHHHHHHHHCCCCCCcc
Confidence 9999987655 67899 9999999997 4566653
No 144
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.91 E-value=1.3e-24 Score=209.15 Aligned_cols=173 Identities=27% Similarity=0.494 Sum_probs=143.9
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|++.+.... ....+.+.+|+.++++++||||+++++.+.+++..|+++||+++++|.+++.+...+++..+
T Consensus 16 ~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~ 95 (262)
T cd05572 16 SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTA 95 (262)
T ss_pred CCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHH
Confidence 46889999999765543 34456799999999999999999999999999999999999999999999988778999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++|++|+||+|+||+++.+. .+.++|||.+....... ......++..|+|||...+. .
T Consensus 96 ~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~-~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~ 171 (262)
T cd05572 96 RFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG-YVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDF 171 (262)
T ss_pred HHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC-CEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCC
Confidence 99999999999999999999999999999997643 34445999876543321 11234566789999987654 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ |++|+++|++ +..||..
T Consensus 172 ~~Di-~slG~il~~l~~g~~p~~~ 194 (262)
T cd05572 172 SVDY-WSLGILLYELLTGRPPFGE 194 (262)
T ss_pred hhhh-hhhHHHHHHHHhCCCCcCC
Confidence 6899 9999999999 6677764
No 145
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.91 E-value=6.6e-25 Score=213.31 Aligned_cols=175 Identities=23% Similarity=0.335 Sum_probs=140.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-------CC
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-------KL 75 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-------~l 75 (477)
++..||+|.++... .......+.+|+.+++.++||||+++++++.+....+++|||++|++|.+++...+ .+
T Consensus 35 ~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~ 113 (277)
T cd05036 35 VELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSL 113 (277)
T ss_pred CceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCC
Confidence 56789999886443 23344678999999999999999999999998889999999999999999997653 48
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC--cceeecccccceecccCCcccccCCeEEEeccccccccC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN--TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~--~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~ 153 (477)
++..++.++.||+.||.|||++|++||||||+||+++.+ ...+.+.|||.+....+..+...+........|+|||..
T Consensus 114 ~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 193 (277)
T cd05036 114 TMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAF 193 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHH
Confidence 899999999999999999999999999999999999754 234455699988765544433222233334579999987
Q ss_pred CCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 154 SSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 154 ~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.+. .++|+ ||+|+++||+ +..||.+
T Consensus 194 ~~~~~~~~~Di-wslG~il~el~~~g~~pf~~ 224 (277)
T cd05036 194 LDGIFTSKTDV-WSFGVLLWEIFSLGYMPYPG 224 (277)
T ss_pred hcCCcCchhHH-HHHHHHHHHHHcCCCCCCCC
Confidence 654 77899 9999999996 5677764
No 146
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.91 E-value=3.1e-25 Score=214.13 Aligned_cols=171 Identities=22% Similarity=0.301 Sum_probs=140.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++++.||+|.++... ......+.+|+.+++.++||||+++++.+...+..|++|||+++++|.+++...+.+++..+.
T Consensus 32 ~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 109 (267)
T cd06645 32 NTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIA 109 (267)
T ss_pred CCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHH
Confidence 468899999987553 233456889999999999999999999999999999999999999999999888889999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCC---CC--
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPS---SK-- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~---~~-- 156 (477)
.++.|++.||.|||++|++|+||||+||+++.+. ++.+.|||.+....... .......++..|+|||... ..
T Consensus 110 ~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (267)
T cd06645 110 YVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG-HVKLADFGVSAQITATI--AKRKSFIGTPYWMAPEVAAVERKGGY 186 (267)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-CEEECcceeeeEccCcc--cccccccCcccccChhhhccccCCCC
Confidence 9999999999999999999999999999997643 34445999875443211 1123346778899999863 11
Q ss_pred -CcccccCcceEEEEEE--eeeccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ ||+|+++|++ +..||.
T Consensus 187 ~~~~Dv-wSlG~il~~l~~~~~p~~ 210 (267)
T cd06645 187 NQLCDI-WAVGITAIELAELQPPMF 210 (267)
T ss_pred Cchhhh-HHHHHHHHHHhcCCCCcc
Confidence 67899 9999999999 556765
No 147
>KOG0584|consensus
Probab=99.91 E-value=7.7e-26 Score=228.40 Aligned_cols=197 Identities=20% Similarity=0.294 Sum_probs=156.6
Q ss_pred CCcEEEEEEcccCCC--ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC--eEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 3 QHTEVAIKCIDKTKV--SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER--YVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
+|..||.-.++.... +++..++|..|+.+|+.|+||||+++|++|.+.. .+-+|+|.+..|+|+.|+++.++++.+
T Consensus 64 ~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~k 143 (632)
T KOG0584|consen 64 EGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIK 143 (632)
T ss_pred cchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHH
Confidence 344555333333322 3455689999999999999999999999998765 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC--CcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 79 QCQQFVRQLVLALKFLREN--NVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~--givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
.++.|++||+.||.|||++ .|+|||||-+||||+.+.-.+.+.|+|++.....+.. ...+|||-|||||++...
T Consensus 144 aik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a----ksvIGTPEFMAPEmYEE~ 219 (632)
T KOG0584|consen 144 AIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA----KSVIGTPEFMAPEMYEEN 219 (632)
T ss_pred HHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc----ceeccCccccChHHHhhh
Confidence 9999999999999999998 6999999999999988655555569999876554432 347999999999999876
Q ss_pred --CcccccCcceEEEEEE--eeecccccccc-------------CCCCCcchHHHHHHHHHHhhh
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFASQIRT-------------GWLRDSEEKELGNHLKRALEP 204 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~~~r~-------------~~~~~~~~~~l~~~i~~~l~~ 204 (477)
..+|+ |+||+.++|| +-.||+.-..+ .........++..+|.++|.+
T Consensus 220 YnE~VDV-YaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~ 283 (632)
T KOG0584|consen 220 YNELVDV-YAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT 283 (632)
T ss_pred cchhhhh-hhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC
Confidence 88999 9999999999 44677543221 113344567777777777765
No 148
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.91 E-value=9.7e-24 Score=202.26 Aligned_cols=173 Identities=26% Similarity=0.351 Sum_probs=141.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
.+++.||+|.++... .....+.+.+|+.+++.++||||+++++.+..++.+|++|||+++++|.+++... ..+++..
T Consensus 23 ~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~ 101 (255)
T cd08219 23 NSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDT 101 (255)
T ss_pred CCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHH
Confidence 368899999986543 2344567889999999999999999999999999999999999999999998653 3589999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++|+||||+||+++++. ++...|||.+........ ......++..|+|||...+.
T Consensus 102 ~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~-~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~ 178 (255)
T cd08219 102 ILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG-KVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYN 178 (255)
T ss_pred HHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC-cEEEcccCcceeeccccc--ccccccCCccccCHHHHccCCcC
Confidence 999999999999999999999999999999997643 344459998754432211 12234567789999988665
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||..
T Consensus 179 ~~~Dv-~slG~i~~~l~~g~~p~~~ 202 (255)
T cd08219 179 NKSDI-WSLGCILYELCTLKHPFQA 202 (255)
T ss_pred chhhh-hhhchhheehhhccCCCCC
Confidence 67899 9999999999 6778864
No 149
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.91 E-value=6.8e-25 Score=222.68 Aligned_cols=174 Identities=22% Similarity=0.365 Sum_probs=142.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC-----eEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-----YVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-----~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+|+.||||++..........+++.+|+.+++.++||||+++++++...+ ..|+||||+. ++|.+++...+.++
T Consensus 23 ~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~l~ 101 (372)
T cd07853 23 RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQPLS 101 (372)
T ss_pred CCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCCCCC
Confidence 47899999998765444445567899999999999999999999998776 7899999997 78999988777899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
+..++.++.|++.||.|||++|++||||||+|||++.+. .+.++|||.+........ ......+++..|+|||...+.
T Consensus 102 ~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~-~~kL~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~ 179 (372)
T cd07853 102 SDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC-VLKICDFGLARVEEPDES-KHMTQEVVTQYYRAPEILMGS 179 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC-CEEeccccceeecccCcc-ccCCCCCcCCCcCCHHHHcCC
Confidence 999999999999999999999999999999999998653 444569998865332211 112234567889999987653
Q ss_pred ----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++|+ +..||.+
T Consensus 180 ~~~~~~~Di-wslG~il~el~~g~~pf~~ 207 (372)
T cd07853 180 RHYTSAVDI-WSVGCIFAELLGRRILFQA 207 (372)
T ss_pred CCCCcHHHH-HhHHHHHHHHHcCCCCCCC
Confidence 56899 9999999999 6677764
No 150
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.91 E-value=2e-24 Score=211.46 Aligned_cols=172 Identities=23% Similarity=0.311 Sum_probs=137.9
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
++..+++|.+.... ....+.+.+|+.++++++||||+++++++......++||||+++++|.+++..++
T Consensus 34 ~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 111 (291)
T cd05094 34 DKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 111 (291)
T ss_pred cceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCccccccccc
Confidence 45568889875442 3444678999999999999999999999999999999999999999999997542
Q ss_pred -------CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecc
Q psy6508 74 -------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV 146 (477)
Q Consensus 74 -------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~ 146 (477)
.+++..++.++.|++.||.|||++|++||||||+||+++.+. .+...|||.+...........+....++..
T Consensus 112 ~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~-~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~ 190 (291)
T cd05094 112 QPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL-LVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 190 (291)
T ss_pred ccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC-cEEECCCCcccccCCCceeecCCCCCccee
Confidence 378899999999999999999999999999999999998653 344459998764433222223334455677
Q ss_pred ccccccCCCC---CcccccCcceEEEEEE---eeeccc
Q psy6508 147 FEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 147 y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
|+|||...+. .++|+ ||+|+++||+ +..||.
T Consensus 191 y~aPE~~~~~~~~~~~Di-~slG~il~el~t~g~~p~~ 227 (291)
T cd05094 191 WMPPESIMYRKFTTESDV-WSFGVILWEIFTYGKQPWF 227 (291)
T ss_pred ecChHHhccCCCCchhhH-HHHHHHHHHHHhCCCCCCC
Confidence 9999987665 56899 9999999997 456664
No 151
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.91 E-value=1.3e-24 Score=210.18 Aligned_cols=175 Identities=19% Similarity=0.336 Sum_probs=139.8
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCe------EEEEEecCCCCCHHHHHHhC----
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYCDGGDLCSFIRSH---- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~------~~lv~e~~~g~sL~~~l~~~---- 72 (477)
++..||+|.++.........+.+.+|+..++.++||||+++++++..... .++++||+++++|..++...
T Consensus 26 ~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~ 105 (273)
T cd05035 26 SQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGG 105 (273)
T ss_pred CcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccC
Confidence 35789999998766556666789999999999999999999998765443 89999999999999998542
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccc
Q psy6508 73 --EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150 (477)
Q Consensus 73 --~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~pp 150 (477)
..+++..+..++.|++.||.|||++|++||||||+||+++++. ++.++|||.+...........+.....+..|+||
T Consensus 106 ~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~p 184 (273)
T cd05035 106 LPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDM-TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 184 (273)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCC-eEEECCccceeeccccccccccccccCCccccCH
Confidence 2589999999999999999999999999999999999997652 3445699988755433332222223344579999
Q ss_pred ccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 151 EIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 151 E~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|...+. .++|+ ||+|+++||+ +..||.+
T Consensus 185 e~~~~~~~~~~~Dv-~SlG~il~el~~~g~~p~~~ 218 (273)
T cd05035 185 ESLADRVYTSKSDV-WAFGVTMWEIATRGQTPYPG 218 (273)
T ss_pred hhcccCCCCcccch-HHHHHHHHHHHhCCCCCCCC
Confidence 987655 77999 9999999998 5566653
No 152
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.91 E-value=7.6e-25 Score=210.29 Aligned_cols=174 Identities=23% Similarity=0.376 Sum_probs=144.8
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|.+.+..... ...+.+.+|+.++++++||||+++++.+..+...|+++||++|++|.+++.....+++..+
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~ 102 (258)
T cd05578 23 DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQV 102 (258)
T ss_pred cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHH
Confidence 468999999997664433 4567899999999999999999999999999999999999999999999988778999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|+++||.|||++|++|+||+|+||+++++. .+..+|||......... ......++..|.|||...+. .
T Consensus 103 ~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~-~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~ 178 (258)
T cd05578 103 KFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG-HVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSV 178 (258)
T ss_pred HHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC-CEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCC
Confidence 99999999999999999999999999999997642 34455999875433221 11234566789999987665 6
Q ss_pred cccccCcceEEEEEE--eeeccccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
++|+ |++|+++|++ +..||...
T Consensus 179 ~~Di-~slG~~l~~l~~g~~p~~~~ 202 (258)
T cd05578 179 AVDW-WSLGVTAYECLRGKRPYRGH 202 (258)
T ss_pred cccc-hhhHHHHHHHHhCCCCCCCC
Confidence 7899 9999999999 67787743
No 153
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.91 E-value=4.6e-25 Score=211.22 Aligned_cols=174 Identities=25% Similarity=0.357 Sum_probs=144.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
.+++.||+|.+.....+....+.+.+|+.++++++|||++++++.+..++..++||||++|++|.+++... ..+++..
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 102 (256)
T cd08220 23 ADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDT 102 (256)
T ss_pred CCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHH
Confidence 46889999999877666666778999999999999999999999999999999999999999999999764 3589999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++|+||+|+||++++++..+...|||.+....... ......++..|+|||...+.
T Consensus 103 ~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~ 179 (256)
T cd08220 103 ILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS---KAYTVVGTPCYISPELCEGKPYN 179 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc---cccccccCCcccCchhccCCCCC
Confidence 999999999999999999999999999999998654444456999876443211 11234566789999998765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||..
T Consensus 180 ~~~Dv-~slG~~l~~l~~~~~~~~~ 203 (256)
T cd08220 180 QKSDI-WALGCVLYELASLKRAFEA 203 (256)
T ss_pred cccch-HHHHHHHHHHHhCCCCccc
Confidence 67899 9999999999 5566653
No 154
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.91 E-value=1.4e-24 Score=212.23 Aligned_cols=171 Identities=23% Similarity=0.307 Sum_probs=134.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc---CCCCccceEEEEE-----eCCeEEEEEecCCCCCHHHHHHhC--
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL---HHQHIVTMLDFLW-----DERYVYIILEYCDGGDLCSFIRSH-- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~~~~~~~-----~~~~~~lv~e~~~g~sL~~~l~~~-- 72 (477)
+|+.||+|.++...........+.+|+.+++.+ +||||+++++++. ....++++|||++ ++|.+++...
T Consensus 26 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~ 104 (290)
T cd07862 26 GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE 104 (290)
T ss_pred CCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCC
Confidence 467899999876654443445567788887766 6999999999875 2456899999997 7999999763
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 73 EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 73 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
..+++..+..++.|++.||.|||++||+||||||+|||++.+. .+.++|||.+...... ....+..++..|+|||.
T Consensus 105 ~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~ 180 (290)
T cd07862 105 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEV 180 (290)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC-CEEEccccceEeccCC---cccccccccccccChHH
Confidence 3589999999999999999999999999999999999997643 3444599988654322 22334567889999998
Q ss_pred CCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
..+. .++|+ ||+|+++||+ +..||.+
T Consensus 181 ~~~~~~~~~~Di-wslG~il~el~~g~~~f~~ 211 (290)
T cd07862 181 LLQSSYATPVDL-WSVGCIFAEMFRRKPLFRG 211 (290)
T ss_pred HhCCCCCCccch-HHHHHHHHHHHcCCCCcCC
Confidence 7654 67899 9999999998 5566653
No 155
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.91 E-value=1.5e-24 Score=211.21 Aligned_cols=173 Identities=25% Similarity=0.331 Sum_probs=139.5
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
++..+|+|.++.. .....+.+.+|+.+++.++||||+++++++......+++|||+++++|.+++...+
T Consensus 34 ~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 111 (280)
T cd05092 34 DKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGG 111 (280)
T ss_pred CceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhccc
Confidence 4668899987644 34456789999999999999999999999999999999999999999999997643
Q ss_pred ------CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccc
Q psy6508 74 ------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVF 147 (477)
Q Consensus 74 ------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y 147 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++++. .+.+.|||.+................++..|
T Consensus 112 ~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~-~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y 190 (280)
T cd05092 112 EDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 190 (280)
T ss_pred ccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC-CEEECCCCceeEcCCCceeecCCCccccccc
Confidence 478899999999999999999999999999999999997642 3445599987644332222223334455679
Q ss_pred cccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 148 EPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 148 ~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
+|||...+. .++|+ ||+|+++||+ +..||..
T Consensus 191 ~aPE~~~~~~~~~~~Di-~slG~il~el~~~g~~p~~~ 227 (280)
T cd05092 191 MPPESILYRKFTTESDI-WSFGVVLWEIFTYGKQPWYQ 227 (280)
T ss_pred cCHHHhccCCcCchhhH-HHHHHHHHHHHcCCCCCCcc
Confidence 999987665 67899 9999999998 4577743
No 156
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.91 E-value=3.7e-25 Score=241.12 Aligned_cols=174 Identities=25% Similarity=0.356 Sum_probs=141.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe--CCeEEEEEecCCCCCHHHHHHhC----CCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSH----EKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv~e~~~g~sL~~~l~~~----~~l 75 (477)
.+++.||+|.+............+..|+.++++|+||||++++++|.. ...+||||||+++++|.++|... +.+
T Consensus 36 ~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L 115 (1021)
T PTZ00266 36 RTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKI 115 (1021)
T ss_pred CCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCC
Confidence 357789999998776666667789999999999999999999998864 35799999999999999999752 469
Q ss_pred CHHHHHHHHHHHHHHHHHHHhC-------CcEEccCCCCceeeccC----------------cceeecccccceecccCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLREN-------NVCHFDLKPQNILIKNN----------------TLKLAGLKQGVSEKAKGS 132 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~-------givHrDlkp~NIll~~~----------------~~rl~~~dfG~~~~~~gs 132 (477)
++..++.|+.||+.||.|||+. +|+||||||+||||+.+ ...+.++|||++......
T Consensus 116 ~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~ 195 (1021)
T PTZ00266 116 EEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE 195 (1021)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccc
Confidence 9999999999999999999984 49999999999999642 122455699988654322
Q ss_pred cccccCCeEEEeccccccccCCCC-----CcccccCcceEEEEEE--eeecccc
Q psy6508 133 AYIEQGNTKVICSVFEPREIPSSK-----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 133 ~~~~~g~t~v~~~~y~ppE~~~~~-----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. ...+.++++.|+|||++.+. .++|+ ||+|+++|+| +..||..
T Consensus 196 s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDV-WSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 196 S---MAHSCVGTPYYWSPELLLHETKSYDDKSDM-WALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred c---cccccCCCccccCHHHHhccCCCCCchhHH-HHHHHHHHHHHHCCCCCCc
Confidence 1 12345678899999987532 57899 9999999999 6688864
No 157
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.91 E-value=1.2e-24 Score=208.52 Aligned_cols=174 Identities=24% Similarity=0.366 Sum_probs=144.2
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC---------C
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---------E 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------~ 73 (477)
++..|++|.++...... ..+.+.+|+..++.++||||+++++++.....++++|||+++++|.+++... .
T Consensus 22 ~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 100 (262)
T cd00192 22 KTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKS 100 (262)
T ss_pred CCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccc
Confidence 37889999987665433 4678999999999999999999999999999999999999999999999875 6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccC
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~ 153 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+................++..|+|||..
T Consensus 101 ~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 179 (262)
T cd00192 101 TLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL-VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESL 179 (262)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC-cEEEcccccccccccccccccccCCCcCccccCHHHh
Confidence 799999999999999999999999999999999999998752 3444599988655433222223344556789999987
Q ss_pred CCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 154 SSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 154 ~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
... .++|+ |++|+++|++ +..||..
T Consensus 180 ~~~~~~~~~Di-~slG~il~~l~~~g~~p~~~ 210 (262)
T cd00192 180 KDGIFTSKSDV-WSFGVLLWEIFTLGATPYPG 210 (262)
T ss_pred ccCCcchhhcc-HHHHHHHHHHHhcCCCCCCC
Confidence 654 67899 9999999998 4677764
No 158
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.91 E-value=3.9e-25 Score=218.10 Aligned_cols=176 Identities=22% Similarity=0.350 Sum_probs=140.9
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.|++|.++..... ....+.+.+|+.+++.++||||+++++.+..++.++++|||++|++|.+++...+.+++..+
T Consensus 24 ~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~ 103 (305)
T cd05609 24 ETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMA 103 (305)
T ss_pred CCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHH
Confidence 46789999998765432 23456788999999999999999999999999999999999999999999988788999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc-------------ccCCeEEEeccc
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI-------------EQGNTKVICSVF 147 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~-------------~~g~t~v~~~~y 147 (477)
..++.|++.||.|||++|++||||||+||+++.+. .+...|||.+.....+... ....+..++..|
T Consensus 104 ~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 182 (305)
T cd05609 104 RMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG-HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEY 182 (305)
T ss_pred HHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC-CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccc
Confidence 99999999999999999999999999999997642 3344599976532111000 001123456679
Q ss_pred cccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 148 EPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 148 ~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|||..... .++|+ |++|+++||+ +..||.+
T Consensus 183 ~aPE~~~~~~~~~~~Di-~slG~vl~el~~g~~pf~~ 218 (305)
T cd05609 183 IAPEVILRQGYGKPVDW-WAMGIILYEFLVGCVPFFG 218 (305)
T ss_pred cCchhccCCCCCchhhH-HHHHHHHHHHHhCCCCCCC
Confidence 999987654 67899 9999999999 6677763
No 159
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.91 E-value=4.5e-25 Score=212.87 Aligned_cols=174 Identities=23% Similarity=0.310 Sum_probs=139.4
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh----CCCCC
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS----HEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~l~ 76 (477)
.+++.||||.++.... .......+.+|+.+++.++||||+++++++...+..++++||+++++|.+++.. ...++
T Consensus 25 ~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~ 104 (267)
T cd08228 25 LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIP 104 (267)
T ss_pred CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCC
Confidence 3688999998865433 344456789999999999999999999999999999999999999999998853 23589
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
+..+..++.|++.||.|||++|++|+||||+||+++.+. .+.+.|||.+....... ....+..++..|+|||...+.
T Consensus 105 ~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~-~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~ 181 (267)
T cd08228 105 ERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG-VVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHEN 181 (267)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC-CEEECccccceeccchh--HHHhcCCCCccccChhhhccC
Confidence 999999999999999999999999999999999997643 23445898765433211 111233466789999987655
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 182 ~~~~~~Di-~slG~~l~el~~g~~p~~~ 208 (267)
T cd08228 182 GYNFKSDI-WSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred CCCchhhH-HHHHHHHHHHhcCCCCCcc
Confidence 67899 9999999999 6677753
No 160
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.91 E-value=6.8e-25 Score=224.20 Aligned_cols=168 Identities=20% Similarity=0.221 Sum_probs=138.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.+.... ...+|+.+|++++||||+++++.+...+..|++||++. ++|.+++...+.+++..++
T Consensus 117 ~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~ 188 (392)
T PHA03207 117 EQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAI 188 (392)
T ss_pred ccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHH
Confidence 356789999876432 24589999999999999999999999999999999996 7999999777789999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++||+||||||+|||++.+. ++.++|||++................++..|+|||.+.+. .+
T Consensus 189 ~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~-~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 267 (392)
T PHA03207 189 TIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE-NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAK 267 (392)
T ss_pred HHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC-CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCch
Confidence 9999999999999999999999999999997643 3445699988654433222222245678899999998765 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|+++||+ +..||.+
T Consensus 268 ~Dv-wslGvil~el~~g~~pf~~ 289 (392)
T PHA03207 268 TDI-WSAGLVLFEMSVKNVTLFG 289 (392)
T ss_pred hhH-HHHHHHHHHHHHCCCCCCC
Confidence 899 9999999999 6677764
No 161
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.91 E-value=1.8e-24 Score=210.76 Aligned_cols=174 Identities=22% Similarity=0.325 Sum_probs=138.5
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---------- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------- 72 (477)
+++.||+|.+.... .......+.+|+.++++++||||+++++++......|++|||+++++|.+++...
T Consensus 33 ~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 111 (283)
T cd05090 33 HAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSS 111 (283)
T ss_pred CcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCcccccc
Confidence 56789999987543 3445567899999999999999999999999999999999999999999998532
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEec
Q psy6508 73 -------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICS 145 (477)
Q Consensus 73 -------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~ 145 (477)
..+++..+..++.|++.||.|||++|++||||||+||+++++. .+.+.|||.+.............+..++.
T Consensus 112 ~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 190 (283)
T cd05090 112 DEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL-HVKISDLGLSREIYSADYYRVQPKSLLPI 190 (283)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC-cEEeccccccccccCCcceecccCCCccc
Confidence 2378888999999999999999999999999999999998653 23445999886543322222223334456
Q ss_pred cccccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 146 VFEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 146 ~y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.|+|||...+. .++|+ ||+|++++|+ +..||.+
T Consensus 191 ~y~aPE~~~~~~~~~~~Dv-~slG~il~el~~~g~~p~~~ 229 (283)
T cd05090 191 RWMPPEAIMYGKFSSDSDI-WSFGVVLWEIFSFGLQPYYG 229 (283)
T ss_pred eecChHHhccCCCCchhhh-HHHHHHHHHHHcCCCCCCCC
Confidence 79999987654 67899 9999999997 4467653
No 162
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.91 E-value=1.3e-24 Score=219.49 Aligned_cols=170 Identities=22% Similarity=0.358 Sum_probs=138.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC------eEEEEEecCCCCCHHHHHHhCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER------YVYIILEYCDGGDLCSFIRSHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~------~~~lv~e~~~g~sL~~~l~~~~~l 75 (477)
.+|+.||+|++............+.+|+.+++.++||||+++++++...+ .+|+||||++ ++|.+.+.. .+
T Consensus 44 ~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~ 120 (359)
T cd07876 44 VLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIHM--EL 120 (359)
T ss_pred CCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCC-cCHHHHHhc--cC
Confidence 46889999999776555555677889999999999999999999986443 5799999997 677777653 58
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
++..+..++.|++.||.|||++||+||||||+||+++.+. .+.++|||.+....... ......++..|+|||...+
T Consensus 121 ~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~-~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~ 196 (359)
T cd07876 121 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILG 196 (359)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-CEEEecCCCccccccCc---cCCCCcccCCCCCchhccC
Confidence 8999999999999999999999999999999999997643 34445999876433221 1234567888999999876
Q ss_pred C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|+++|+| +..||.+
T Consensus 197 ~~~~~~~Di-wSlG~il~el~tg~~pf~~ 224 (359)
T cd07876 197 MGYKENVDI-WSVGCIMGELVKGSVIFQG 224 (359)
T ss_pred CCCCcchhh-HHHHHHHHHHHhCCCCCCC
Confidence 5 67899 9999999999 6788874
No 163
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.91 E-value=8e-25 Score=214.51 Aligned_cols=167 Identities=23% Similarity=0.277 Sum_probs=137.5
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
.+..||+|.+.... .....+.+.+|+.++++++||||+++++++..+...+++||++++++|.+++.+..
T Consensus 45 ~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (296)
T cd05051 45 APVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACN 123 (296)
T ss_pred CceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccc
Confidence 34679999987553 33456789999999999999999999999999999999999999999999998765
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccc
Q psy6508 74 --KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151 (477)
Q Consensus 74 --~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE 151 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++.+ .++.++|||.+.............+..++..|+|||
T Consensus 124 ~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 202 (296)
T cd05051 124 SKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN-YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWE 202 (296)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC-CceEEccccceeecccCcceeecCcCCCCceecCHH
Confidence 68999999999999999999999999999999999999775 244456999886544332222223344556799999
Q ss_pred cCCCC---CcccccCcceEEEEEE
Q psy6508 152 IPSSK---TSLEYQRSKGELYVEF 172 (477)
Q Consensus 152 ~~~~~---~~~Di~~s~G~il~e~ 172 (477)
...+. .++|+ ||+|+++||+
T Consensus 203 ~~~~~~~~~~~Dv-~slG~~l~el 225 (296)
T cd05051 203 SVLLGKFTTKSDV-WAFGVTLWEI 225 (296)
T ss_pred HhhcCCCCccchh-hhhHHHHHHH
Confidence 87654 77899 9999999987
No 164
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.91 E-value=3e-24 Score=207.14 Aligned_cols=176 Identities=26% Similarity=0.379 Sum_probs=142.3
Q ss_pred CCCcEEEEEEcccCCCCh-------hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSE-------NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEK 74 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-------~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~ 74 (477)
.+++.||+|.+....... ...+.+.+|+.++++++||||+++++++..++..+++|||+++++|.+++...+.
T Consensus 23 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~ 102 (267)
T cd06628 23 SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGA 102 (267)
T ss_pred CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccC
Confidence 367899999887654321 1235688999999999999999999999999999999999999999999988888
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc----ccCCeEEEecccccc
Q psy6508 75 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI----EQGNTKVICSVFEPR 150 (477)
Q Consensus 75 l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~----~~g~t~v~~~~y~pp 150 (477)
+++..+..++.|++.||.|||++|++||||+|+||+++++. .+.+.|||.+......... .......++..|.||
T Consensus 103 l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p 181 (267)
T cd06628 103 FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG-GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP 181 (267)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC-CEEecccCCCcccccccccCCccccccccCCCcCccCh
Confidence 99999999999999999999999999999999999997653 3444599987655421110 011123456789999
Q ss_pred ccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 151 EIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 151 E~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
|...+. .++|+ |++|++++++ +..||..
T Consensus 182 e~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~ 214 (267)
T cd06628 182 EVVKQTSYTRKADI-WSLGCLVVEMLTGKHPFPD 214 (267)
T ss_pred hHhccCCCCchhhh-HHHHHHHHHHhhCCCCCCC
Confidence 987665 56899 9999999999 6678864
No 165
>KOG0690|consensus
Probab=99.91 E-value=2.5e-25 Score=208.07 Aligned_cols=174 Identities=19% Similarity=0.316 Sum_probs=150.3
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||||+++++-+- .+....-..|-++|+..+||++..+--.|+...++|+||||+.||.|.-.|.+.+.+++...
T Consensus 191 at~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~Rt 270 (516)
T KOG0690|consen 191 ATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRT 270 (516)
T ss_pred ccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhh
Confidence 47899999999988653 33445567899999999999999998889999999999999999999999998888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+.+...|+.||.|||+++||+||||.+|+|++.+ .+++ .|||+++. +-.+-....|..||+.|.+||++...
T Consensus 271 RFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKi--tDFGLCKE--~I~~g~t~kTFCGTPEYLAPEVleDnDYg 346 (516)
T KOG0690|consen 271 RFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKI--TDFGLCKE--EIKYGDTTKTFCGTPEYLAPEVLEDNDYG 346 (516)
T ss_pred hhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEe--eecccchh--cccccceeccccCChhhcCchhhcccccc
Confidence 9999999999999999999999999999999875 4555 49999853 32333344678899999999999877
Q ss_pred CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.++|+ |.+|+++||| |..||...
T Consensus 347 raVDW-WG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 347 RAVDW-WGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred ceeeh-hhhhHHHHHHHhccCccccc
Confidence 88999 9999999999 88898853
No 166
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.91 E-value=3.1e-25 Score=216.13 Aligned_cols=172 Identities=22% Similarity=0.313 Sum_probs=136.5
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---------- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------- 72 (477)
+++.||+|+++... .....+.+.+|+.+++.++||||+++++++......++++||+++++|.+++...
T Consensus 34 ~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~ 112 (283)
T cd05091 34 QTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTD 112 (283)
T ss_pred ceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccc
Confidence 46789999987553 2334567889999999999999999999999999999999999999999998532
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEec
Q psy6508 73 ------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICS 145 (477)
Q Consensus 73 ------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~ 145 (477)
..+++..+..++.|++.||.|||++|++||||||+||+++++ .++ ..|||++.............+...+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~k--l~Dfg~~~~~~~~~~~~~~~~~~~~~ 190 (283)
T cd05091 113 DDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVK--ISDLGLFREVYAADYYKLMGNSLLPI 190 (283)
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceE--ecccccccccccchheeeccCccCCc
Confidence 247888899999999999999999999999999999999764 444 45999876543322211122334456
Q ss_pred cccccccCCCC---CcccccCcceEEEEEE---eeeccc
Q psy6508 146 VFEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 146 ~y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
.|+|||...+. .++|+ ||+|+++||+ +..||.
T Consensus 191 ~y~aPE~~~~~~~~~~~Dv-~slG~~l~el~~~g~~p~~ 228 (283)
T cd05091 191 RWMSPEAIMYGKFSIDSDI-WSYGVVLWEVFSYGLQPYC 228 (283)
T ss_pred cccCHHHHhcCCCCcchhH-HHHHHHHHHHHcCCCCCCC
Confidence 79999987644 67899 9999999997 335554
No 167
>KOG1989|consensus
Probab=99.91 E-value=5e-25 Score=230.90 Aligned_cols=196 Identities=20% Similarity=0.331 Sum_probs=151.4
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEE-E---eC---CeEEEEEecCCCCCHHHHHHhC--
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFL-W---DE---RYVYIILEYCDGGDLCSFIRSH-- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~-~---~~---~~~~lv~e~~~g~sL~~~l~~~-- 72 (477)
.|+.||+|++-.. ++...+...+|+.+|++|. |||||.+++.. . .. -.++|.||||+||.|-+++..+
T Consensus 61 ~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq 138 (738)
T KOG1989|consen 61 GGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQ 138 (738)
T ss_pred CCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHh
Confidence 3489999997554 5666788999999999995 99999999942 2 11 2578999999999999999753
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC--cEEccCCCCceeeccCcceeecccccceeccc-------CCcccccCCeEEE
Q psy6508 73 EKLSEFQCQQFVRQLVLALKFLRENN--VCHFDLKPQNILIKNNTLKLAGLKQGVSEKAK-------GSAYIEQGNTKVI 143 (477)
Q Consensus 73 ~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~rl~~~dfG~~~~~~-------gs~~~~~g~t~v~ 143 (477)
.+|++.++++|++|+++|+.+||..+ |+|||||-+||||..++ ..++||||-+...- +-.+++..-.+.-
T Consensus 139 ~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g-~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~T 217 (738)
T KOG1989|consen 139 TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG-NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYT 217 (738)
T ss_pred ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC-CEEeCcccccccccCCCccHHHHHHHHHHHHhhC
Confidence 46999999999999999999999987 99999999999997754 44456999875432 2234444446777
Q ss_pred eccccccccCC---CC---CcccccCcceEEEEEEe--eecccccccc-------CCCC-CcchHHHHHHHHHHh
Q psy6508 144 CSVFEPREIPS---SK---TSLEYQRSKGELYVEFK--FAPFASQIRT-------GWLR-DSEEKELGNHLKRAL 202 (477)
Q Consensus 144 ~~~y~ppE~~~---~~---~~~Di~~s~G~il~e~~--~~Pf~~~~r~-------~~~~-~~~~~~l~~~i~~~l 202 (477)
|+-|++||++. +. +++|| |++||++|-+. ..||...+.- .+++ ......+..+|+.+|
T Consensus 218 Tp~YRsPEMIDlysg~pI~eKsDI-WALGclLYkLCy~t~PFe~sg~laIlng~Y~~P~~p~ys~~l~~LI~~mL 291 (738)
T KOG1989|consen 218 TPQYRSPEMIDLYSGLPIGEKSDI-WALGCLLYKLCYFTTPFEESGKLAILNGNYSFPPFPNYSDRLKDLIRTML 291 (738)
T ss_pred CccccChHHHhhhcCCCCcchhHH-HHHHHHHHHHHHhCCCcCcCcceeEEeccccCCCCccHHHHHHHHHHHHh
Confidence 88999999864 22 88999 99999999994 4999876432 2222 355566666666544
No 168
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.91 E-value=6.7e-25 Score=214.37 Aligned_cols=173 Identities=21% Similarity=0.263 Sum_probs=141.2
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~ 78 (477)
.+++.||+|.+....... .....+.+|+.+++.++|+||+++++.+..++..|++|||+++++|.+++... ..+++.
T Consensus 23 ~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 102 (285)
T cd05632 23 ATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEE 102 (285)
T ss_pred CCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHH
Confidence 468899999987654432 23456788999999999999999999999999999999999999999888653 369999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++||+||||||+||+++++. .+.++|||.+....... ...+..++..|+|||...+.
T Consensus 103 ~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~-~~kl~Dfg~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~ 178 (285)
T cd05632 103 RALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG-HIRISDLGLAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRY 178 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC-CEEEecCCcceecCCCC---cccCCCCCcCccChHHhcCCCC
Confidence 9999999999999999999999999999999997653 34456999875432211 11234577889999998655
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 179 ~~~~Di-~slG~~l~~l~~g~~P~~~ 203 (285)
T cd05632 179 TLSPDY-WGLGCLIYEMIEGQSPFRG 203 (285)
T ss_pred Ccccch-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6778764
No 169
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.91 E-value=1.3e-24 Score=210.79 Aligned_cols=173 Identities=20% Similarity=0.289 Sum_probs=137.8
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
+++.||+|.+.... .......+.+|+.+++.++||||+++++++......|++|||+++++|.+++....
T Consensus 35 ~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~ 113 (277)
T cd05032 35 PETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGL 113 (277)
T ss_pred cceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCC
Confidence 45789999986543 33345678899999999999999999999999999999999999999999996532
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 74 -KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 74 -~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+.....+.......+..++..|.|||.
T Consensus 114 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 192 (277)
T cd05032 114 GPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDL-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 192 (277)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCC-CEEECCcccchhhccCcccccCCCCCccccccCHHH
Confidence 367888999999999999999999999999999999998653 344569998765433322222233445567999998
Q ss_pred CCCC---CcccccCcceEEEEEE---eeeccc
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
..+. .++|+ |++|+++||+ +..||.
T Consensus 193 ~~~~~~~~~~Di-~slG~il~el~t~g~~p~~ 223 (277)
T cd05032 193 LKDGVFTTKSDV-WSFGVVLWEMATLAEQPYQ 223 (277)
T ss_pred HhcCCCCcccch-HHHHHHHHHhhccCCCCCc
Confidence 7654 67899 9999999998 346664
No 170
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.91 E-value=1.1e-24 Score=210.10 Aligned_cols=171 Identities=20% Similarity=0.318 Sum_probs=136.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
++++.||+|.+.... ...+.+.+|+.++++++||||+++++++..++.++++|||+++++|.+++.... .+++..
T Consensus 29 ~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~ 105 (263)
T cd05052 29 KYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 105 (263)
T ss_pred cCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHH
Confidence 457889999986542 234678899999999999999999999999999999999999999999997643 589999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
++.++.|++.||.|||++|++||||||+||+++++. .+.+.|||.+.......... ......+..|++||...+.
T Consensus 106 ~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~-~~kl~df~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~ 183 (263)
T cd05052 106 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTA-HAGAKFPIKWTAPESLAYNKFS 183 (263)
T ss_pred HHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC-cEEeCCCccccccccceeec-cCCCCCccccCCHHHhccCCCC
Confidence 999999999999999999999999999999997643 34456999876544322211 1112234569999987655
Q ss_pred CcccccCcceEEEEEEe---eeccc
Q psy6508 157 TSLEYQRSKGELYVEFK---FAPFA 178 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~~---~~Pf~ 178 (477)
.++|+ |++|+++||+. ..||.
T Consensus 184 ~~~Dv-~slG~il~el~t~g~~p~~ 207 (263)
T cd05052 184 IKSDV-WAFGVLLWEIATYGMSPYP 207 (263)
T ss_pred chhHH-HHHHHHHHHHHcCCCCCCC
Confidence 56899 99999999993 35654
No 171
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.91 E-value=7.5e-24 Score=207.39 Aligned_cols=174 Identities=21% Similarity=0.393 Sum_probs=137.3
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--------- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--------- 72 (477)
....||+|.+.... ......++.+|+.+++++ +||||+++++++..++.+|++|||+++++|.+++...
T Consensus 41 ~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~ 119 (293)
T cd05053 41 ETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASP 119 (293)
T ss_pred CceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCcccccc
Confidence 34679999987543 334456789999999999 7999999999999999999999999999999999642
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEec
Q psy6508 73 -------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICS 145 (477)
Q Consensus 73 -------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~ 145 (477)
+.+++..++.++.|++.||.|||++||+||||||+||+++++. .+.+.|||.+.................+.
T Consensus 120 ~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~ 198 (293)
T cd05053 120 DDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDH-VMKIADFGLARDIHHIDYYRKTTNGRLPV 198 (293)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCC-eEEeCccccccccccccceeccCCCCCCc
Confidence 3588999999999999999999999999999999999997643 34456999886544332211111222345
Q ss_pred cccccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 146 VFEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 146 ~y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.|+|||...+. .++|+ ||+|+++||+ +..||.+
T Consensus 199 ~y~aPE~~~~~~~~~~~Di-~slG~il~el~~~g~~p~~~ 237 (293)
T cd05053 199 KWMAPEALFDRVYTHQSDV-WSFGVLLWEIFTLGGSPYPG 237 (293)
T ss_pred cccCHHHhccCCcCcccce-eehhhHHHHHhcCCCCCCCC
Confidence 69999987654 67899 9999999996 4566653
No 172
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.91 E-value=3.3e-24 Score=206.93 Aligned_cols=171 Identities=23% Similarity=0.314 Sum_probs=140.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|++..... .....+.+|+.++++++||||+++++.+..++..|+||||+++++|.+++...+.+++..+.
T Consensus 32 ~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~ 109 (267)
T cd06646 32 HTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIA 109 (267)
T ss_pred CCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHH
Confidence 4678999999865432 23456789999999999999999999999999999999999999999999877789999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-----
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK----- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~----- 156 (477)
.++.|++.||.|||++||+||||||+||+++.+. .+...|||.+....... .......++..|+|||.....
T Consensus 110 ~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~ 186 (267)
T cd06646 110 YVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG-DVKLADFGVAAKITATI--AKRKSFIGTPYWMAPEVAAVEKNGGY 186 (267)
T ss_pred HHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC-CEEECcCccceeecccc--cccCccccCccccCHhHcccccCCCC
Confidence 9999999999999999999999999999997643 34456999886543211 112334566789999987421
Q ss_pred -CcccccCcceEEEEEE--eeeccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ ||+|++++|+ +..||.
T Consensus 187 ~~~~Dv-ws~G~il~el~~g~~p~~ 210 (267)
T cd06646 187 NQLCDI-WAVGITAIELAELQPPMF 210 (267)
T ss_pred cchhhH-HHHHHHHHHHHhCCCCcc
Confidence 56899 9999999999 667775
No 173
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.91 E-value=1.2e-24 Score=209.33 Aligned_cols=172 Identities=20% Similarity=0.263 Sum_probs=137.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
++++.||+|.++.... ..+.+.+|+.++++++||||+++++++...+..|++|||+++++|.+++.... .+++..
T Consensus 28 ~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 104 (261)
T cd05068 28 NNTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQ 104 (261)
T ss_pred cCCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHH
Confidence 3567899999876543 24568899999999999999999999999999999999999999999997644 689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+........... ........|+|||...+.
T Consensus 105 ~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~ 182 (261)
T cd05068 105 LIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN-ICKVADFGLARVIKEDIYEAR-EGAKFPIKWTAPEAALYNRFS 182 (261)
T ss_pred HHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC-CEEECCcceEEEccCCccccc-CCCcCceeccCccccccCCCC
Confidence 999999999999999999999999999999997653 344459998865442211111 111123469999987665
Q ss_pred CcccccCcceEEEEEE---eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||.+
T Consensus 183 ~~~Di-~slG~~l~el~t~g~~p~~~ 207 (261)
T cd05068 183 IKSDV-WSFGILLTEIVTYGRMPYPG 207 (261)
T ss_pred chhhH-HHHHHHHHHHHhcCCCCCCC
Confidence 67899 9999999997 5566654
No 174
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.91 E-value=6.9e-25 Score=213.32 Aligned_cols=172 Identities=28% Similarity=0.384 Sum_probs=139.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
.+++.||+|.+... .....+.+.+|+.++++++||||+++++.+..+...|+||||+++++|.+++.+. ..+++..+
T Consensus 28 ~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~ 105 (280)
T cd06611 28 ETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQI 105 (280)
T ss_pred CCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHH
Confidence 46889999998654 3445567899999999999999999999999999999999999999999998764 46999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.++.|++.||.|||++|++|+||||+||+++.+. ++.+.|||.+....... .......++..|+|||.....
T Consensus 106 ~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~-~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~ 182 (280)
T cd06611 106 RYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG-DVKLADFGVSAKNKSTL--QKRDTFIGTPYWMAPEVVACETFKD 182 (280)
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC-CEEEccCccchhhcccc--cccceeecchhhcCHHHHhhcccCC
Confidence 99999999999999999999999999999997642 33445998765432211 122345677889999986421
Q ss_pred ----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||..
T Consensus 183 ~~~~~~sDi-~slG~il~~l~~g~~p~~~ 210 (280)
T cd06611 183 NPYDYKADI-WSLGITLIELAQMEPPHHE 210 (280)
T ss_pred CCCCccccH-HHHHHHHHHHHhCCCCccc
Confidence 46899 9999999998 6677764
No 175
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.91 E-value=8.9e-25 Score=209.81 Aligned_cols=173 Identities=16% Similarity=0.240 Sum_probs=136.8
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQ 82 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~ 82 (477)
++..||+|.+...... ...+.+.+|+.+++.+.||||+++++++. .+..+++|||+++++|.+++.+...+++..+..
T Consensus 22 ~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~ 99 (257)
T cd05060 22 KEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKE 99 (257)
T ss_pred CcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHH
Confidence 3478999998766543 44567899999999999999999999876 456899999999999999998877899999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc-cccCCeEEEeccccccccCCCC---Cc
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY-IEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~-~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+........ ........++..|.|||...+. .+
T Consensus 100 ~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~-~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 178 (257)
T cd05060 100 LAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH-QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSK 178 (257)
T ss_pred HHHHHHHHHHHHhhcCeeccCcccceEEEcCCC-cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCcc
Confidence 999999999999999999999999999997653 344459998764422211 1111111223469999987655 67
Q ss_pred ccccCcceEEEEEE---eeecccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
+|+ ||+|+++|++ +..||..
T Consensus 179 ~Di-~slG~~l~~~~~~g~~p~~~ 201 (257)
T cd05060 179 SDV-WSYGVTLWEAFSYGAKPYGE 201 (257)
T ss_pred chH-HHHHHHHHHHHcCCCCCccc
Confidence 899 9999999998 4577753
No 176
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.91 E-value=7.8e-25 Score=211.20 Aligned_cols=174 Identities=22% Similarity=0.291 Sum_probs=140.9
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh----CCCCC
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS----HEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~l~ 76 (477)
.+++.||||.+..... .....+++.+|+.+++.++||||+++++.+..++..+++|||++|++|.+++.. ...++
T Consensus 25 ~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~ 104 (267)
T cd08229 25 LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP 104 (267)
T ss_pred CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCC
Confidence 4788999998876443 334456889999999999999999999999999999999999999999999864 34689
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
+..++.++.|++.||.|||++|++|+||||+||+++.++ .+...|||......... .......++..|+|||...+.
T Consensus 105 ~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~ 181 (267)
T cd08229 105 EKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG-VVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHEN 181 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-CEEECcchhhhccccCC--cccccccCCcCccCHHHhcCC
Confidence 999999999999999999999999999999999997643 34456998765432111 111234566789999988655
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||.+
T Consensus 182 ~~~~~~Dv-~slG~il~~l~~g~~p~~~ 208 (267)
T cd08229 182 GYNFKSDI-WSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred CccchhhH-HHHHHHHHHHHhCCCCccc
Confidence 56899 9999999999 6678764
No 177
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.91 E-value=3.6e-24 Score=212.24 Aligned_cols=173 Identities=21% Similarity=0.363 Sum_probs=135.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe--CCeEEEEEecCCCCCHHHHHHhC-------
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSH------- 72 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv~e~~~g~sL~~~l~~~------- 72 (477)
++++.||+|.+...... ..+.+|+.++++++||||+++++++.. +..+|++|||+. ++|.+++...
T Consensus 26 ~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~ 100 (317)
T cd07868 26 KDDRDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANK 100 (317)
T ss_pred CCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccC
Confidence 35788999998755432 346789999999999999999998864 457899999996 7998887532
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc---CcceeecccccceecccCCcc-cccCCeEEEecc
Q psy6508 73 --EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLAGLKQGVSEKAKGSAY-IEQGNTKVICSV 146 (477)
Q Consensus 73 --~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~---~~~rl~~~dfG~~~~~~gs~~-~~~g~t~v~~~~ 146 (477)
..+++..++.++.|++.||.|||++||+||||||+|||+.. ....+.++|||.+........ .....+..+++.
T Consensus 101 ~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~ 180 (317)
T cd07868 101 KPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 180 (317)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCcccccc
Confidence 24899999999999999999999999999999999999942 233455569999865432211 111234567889
Q ss_pred ccccccCCCC----CcccccCcceEEEEEE--eeeccccc
Q psy6508 147 FEPREIPSSK----TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 147 y~ppE~~~~~----~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
|+|||...+. .++|+ ||+|++++++ +..||.+.
T Consensus 181 y~aPE~~~~~~~~~~~~Di-wslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 181 YRAPELLLGARHYTKAIDI-WAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCHHHcCCCCcCchhhH-HHHHHHHHHHHhCCCCccCC
Confidence 9999987653 57899 9999999999 67888643
No 178
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.91 E-value=3.9e-24 Score=208.98 Aligned_cols=173 Identities=18% Similarity=0.247 Sum_probs=141.0
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~ 78 (477)
.+++.||+|.+....... .....+.+|+.++++++||||+++++.+..++..|++|||++|++|.+++...+ .+++.
T Consensus 23 ~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~ 102 (285)
T cd05630 23 ATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEG 102 (285)
T ss_pred CCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHH
Confidence 468899999987654332 233557789999999999999999999999999999999999999999986533 58999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++||+||||||+||+++.+. ++.+.|||.+........ -....++..|+|||...+.
T Consensus 103 ~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~-~~~l~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~ 178 (285)
T cd05630 103 RAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG-HIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERY 178 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC-CEEEeeccceeecCCCcc---ccCCCCCccccChHHHcCCCC
Confidence 9999999999999999999999999999999998643 344569998754322111 1224577889999998765
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 179 ~~~~Di-wslG~~l~~l~~g~~Pf~~ 203 (285)
T cd05630 179 TFSPDW-WALGCLLYEMIAGQSPFQQ 203 (285)
T ss_pred CCcccc-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 7788874
No 179
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.91 E-value=2.9e-24 Score=208.74 Aligned_cols=173 Identities=20% Similarity=0.285 Sum_probs=140.8
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~ 78 (477)
.+|+.||+|.+....... ...+.+.+|+.++++++||||+++++.+...+..|+||||++|++|.+++.+.+ .+++.
T Consensus 16 ~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 95 (277)
T cd05577 16 ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEA 95 (277)
T ss_pred CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHH
Confidence 468899999987654322 234567889999999999999999999999999999999999999999997755 69999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++|++||||+|+||+++++. .+.+.|||.+....... ......+...|.|||...+.
T Consensus 96 ~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~-~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~ 171 (277)
T cd05577 96 RAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG-NVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQGEVY 171 (277)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-CEEEccCcchhhhccCC---ccccccCCCCcCCHHHhcCCCC
Confidence 9999999999999999999999999999999997653 33445999775433211 11233456689999987655
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 172 ~~~~Di-~slG~il~~l~~g~~p~~~ 196 (277)
T cd05577 172 DFSVDW-FALGCTLYEMIAGRSPFRQ 196 (277)
T ss_pred Cchhhh-HHHHHHHHHHhhCCCCCCC
Confidence 57899 9999999999 6788864
No 180
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.91 E-value=9.1e-25 Score=210.48 Aligned_cols=174 Identities=22% Similarity=0.285 Sum_probs=141.2
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----CCCC
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH----EKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----~~l~ 76 (477)
.+|+.||+|.++..... ....+.+.+|+.++++++|||++++++.+...+..+++|||+++++|.+++... ..++
T Consensus 25 ~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 104 (267)
T cd08224 25 LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIP 104 (267)
T ss_pred CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcC
Confidence 37899999998754433 344678999999999999999999999999999999999999999999998642 3589
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
+..+..++.|++.||.|||+.|++||||+|+||+++.+. ++...|||.+....... .......++..|.|||...+.
T Consensus 105 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~-~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~ 181 (267)
T cd08224 105 ERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG-VVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHEN 181 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC-cEEEeccceeeeccCCC--cccceecCCccccCHHHhccC
Confidence 999999999999999999999999999999999997643 34455998875432211 112234567789999987655
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 182 ~~~~~~Di-~slG~il~~l~~g~~p~~~ 208 (267)
T cd08224 182 GYNFKSDI-WSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred CCCchhcH-HHHHHHHHHHHHCCCCccc
Confidence 57899 9999999999 6677754
No 181
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.91 E-value=1.5e-24 Score=211.43 Aligned_cols=174 Identities=20% Similarity=0.228 Sum_probs=136.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+++.||+|.++... .....+.+.+|+.+++.++||||+++++++... ...+++|||+++++|.+++... .+++..
T Consensus 31 ~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~ 108 (283)
T cd05080 31 GTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQ 108 (283)
T ss_pred CCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc-CCCHHH
Confidence 367889999987553 233456788999999999999999999987653 4689999999999999999774 699999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc-cccCCeEEEeccccccccCCCC--
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY-IEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~-~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
++.++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+........ .........+..|+|||...+.
T Consensus 109 ~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~ 187 (283)
T cd05080 109 LLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR-LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKF 187 (283)
T ss_pred HHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC-cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCC
Confidence 999999999999999999999999999999997653 344459998764432111 1111112234458999987654
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||..
T Consensus 188 ~~~~Di-~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 188 SYASDV-WSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred Cccccc-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 5566653
No 182
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.91 E-value=1.2e-24 Score=218.17 Aligned_cols=168 Identities=24% Similarity=0.394 Sum_probs=137.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC------CeEEEEEecCCCCCHHHHHHhCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE------RYVYIILEYCDGGDLCSFIRSHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------~~~~lv~e~~~g~sL~~~l~~~~~l 75 (477)
.+++.||||++..........+.+.+|+.++++++||||+++++++... ...|++++++ +++|.++++. ..+
T Consensus 38 ~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-~~l 115 (343)
T cd07878 38 RLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-QKL 115 (343)
T ss_pred CCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc-CCC
Confidence 4688999999876544444456788999999999999999999987543 3579999998 6899988764 579
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPS 154 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~ 154 (477)
++..+..++.|++.||.|||++||+||||||+||+++.+ .+++ +|||++...... ..+.+++..|+|||...
T Consensus 116 ~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl--~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~ 188 (343)
T cd07878 116 SDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI--LDFGLARQADDE-----MTGYVATRWYRAPEIML 188 (343)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEE--cCCccceecCCC-----cCCccccccccCchHhc
Confidence 999999999999999999999999999999999999764 4444 599998765432 23456788999999876
Q ss_pred CC----CcccccCcceEEEEEE--eeecccc
Q psy6508 155 SK----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 155 ~~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+. .++|+ ||+|+++|+| +..||.+
T Consensus 189 ~~~~~~~~~Di-wslG~il~el~~g~~pf~~ 218 (343)
T cd07878 189 NWMHYNQTVDI-WSVGCIMAELLKGKALFPG 218 (343)
T ss_pred CCccCCchhhh-HhHHHHHHHHHHCCCCCCC
Confidence 53 67899 9999999999 6677764
No 183
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.91 E-value=2.1e-24 Score=210.21 Aligned_cols=172 Identities=27% Similarity=0.384 Sum_probs=139.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~~ 80 (477)
.++..+++|.+... .....+.+.+|+.+++.++||||+++++.+...+..|+++||+++++|..++.+ ...+++..+
T Consensus 28 ~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~ 105 (282)
T cd06643 28 ETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQI 105 (282)
T ss_pred CCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHH
Confidence 46788999988644 344567789999999999999999999999999999999999999999998765 457899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.|++.||.|||+.|++||||||+||+++.++ ++..+|||.+....... .......++..|+|||.....
T Consensus 106 ~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~-~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ 182 (282)
T cd06643 106 RVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKD 182 (282)
T ss_pred HHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC-CEEEccccccccccccc--cccccccccccccCHhhccccCCCC
Confidence 99999999999999999999999999999997643 34456999875432211 112334567789999987421
Q ss_pred ----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||..
T Consensus 183 ~~~~~~~Dv-~slGvil~el~~g~~p~~~ 210 (282)
T cd06643 183 RPYDYKADV-WSLGITLIEMAQIEPPHHE 210 (282)
T ss_pred CCCCccchh-hhHHHHHHHHccCCCCccc
Confidence 46899 9999999999 5577754
No 184
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.91 E-value=1.9e-25 Score=215.26 Aligned_cols=175 Identities=27% Similarity=0.446 Sum_probs=139.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
..+..|+||.++.. ...+..+.+.+|++.+++++||||+++++++...+..++||||+++|+|.+++... ..+++..
T Consensus 26 ~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~ 104 (259)
T PF07714_consen 26 DKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQ 104 (259)
T ss_dssp SSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHH
T ss_pred CCCEEEEEEEeccc-cccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45788999999543 34455788999999999999999999999999888899999999999999999986 5799999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..|+.|++.||.|||+++++|++|+|+||+++.+. .+.+.|||......................|.|||.....
T Consensus 105 ~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~-~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 183 (259)
T PF07714_consen 105 RLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG-QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYT 183 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT-EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEES
T ss_pred cccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999998653 4444699988766333333334445566789999987655
Q ss_pred CcccccCcceEEEEEE---eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ ||+|++++|+ +..||..
T Consensus 184 ~ksDV-ysfG~~l~ei~~~~~~p~~~ 208 (259)
T PF07714_consen 184 KKSDV-YSFGMLLYEILTLGKFPFSD 208 (259)
T ss_dssp HHHHH-HHHHHHHHHHHTTSSGTTTT
T ss_pred ccccc-cccccccccccccccccccc
Confidence 67899 9999999999 3456553
No 185
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.90 E-value=2.4e-24 Score=208.31 Aligned_cols=174 Identities=18% Similarity=0.242 Sum_probs=135.6
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-----CCCH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-----KLSE 77 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-----~l~~ 77 (477)
++..+|+|.++.... ......+.+|+.++++++||||+++++.+.+....++||||+++++|.+++.... ..++
T Consensus 21 ~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 99 (269)
T cd05087 21 TPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDP 99 (269)
T ss_pred CceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccH
Confidence 456799998866542 2334578899999999999999999999998889999999999999999997532 3567
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC--
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS-- 155 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~-- 155 (477)
..+..++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+................++..|+|||...+
T Consensus 100 ~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~-~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 178 (269)
T cd05087 100 TTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL-TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVH 178 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC-cEEECCccccccccCcceeecCCCcCCcccccCHhHhcccc
Confidence 78889999999999999999999999999999997642 344569998754332222122223345567999998753
Q ss_pred --------CCcccccCcceEEEEEE---eeecccc
Q psy6508 156 --------KTSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 156 --------~~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
..++|+ ||+|++++|+ +..||..
T Consensus 179 ~~~~~~~~~~~~Di-wslG~~l~el~~~g~~p~~~ 212 (269)
T cd05087 179 GNLLVVDQTKESNV-WSLGVTIWELFELGSQPYRH 212 (269)
T ss_pred ccccccCCCccchh-HHHHHHHHHHHhCCCCCCCC
Confidence 257899 9999999986 5667753
No 186
>KOG2345|consensus
Probab=99.90 E-value=3.6e-25 Score=200.40 Aligned_cols=211 Identities=18% Similarity=0.213 Sum_probs=156.1
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe-----CCeEEEEEecCCCCCHHHHHHhC----C
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD-----ERYVYIILEYCDGGDLCSFIRSH----E 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-----~~~~~lv~e~~~g~sL~~~l~~~----~ 73 (477)
+++.||+|++.... .+..+..++|+...++++|||+++++++... ....||+++|+..|+|.+.++.. .
T Consensus 45 ~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~ 122 (302)
T KOG2345|consen 45 TGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGN 122 (302)
T ss_pred cccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCC
Confidence 67889999987654 5667889999999999999999999887543 34599999999999999998753 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC--cEEccCCCCceeeccCcceeecccccceeccc----CCcccc--c-CCeEEEe
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENN--VCHFDLKPQNILIKNNTLKLAGLKQGVSEKAK----GSAYIE--Q-GNTKVIC 144 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~rl~~~dfG~~~~~~----gs~~~~--~-g~t~v~~ 144 (477)
.+++.++..|+.++++||++||+.. +.||||||.||++.+.. .++.+|||.+..+. |+.... + ......+
T Consensus 123 ~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~-~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct 201 (302)
T KOG2345|consen 123 FVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSG-LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCT 201 (302)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCC-ceEEEeccCccccceEeechHHHHHHHHHHHHhCC
Confidence 6999999999999999999999998 99999999999997732 33446999876543 221110 0 1124556
Q ss_pred ccccccccCCCC------CcccccCcceEEEEEE--eeeccccccccC----------CCCCcchHHHHHHHHHHhhhhh
Q psy6508 145 SVFEPREIPSSK------TSLEYQRSKGELYVEF--KFAPFASQIRTG----------WLRDSEEKELGNHLKRALEPAV 206 (477)
Q Consensus 145 ~~y~ppE~~~~~------~~~Di~~s~G~il~e~--~~~Pf~~~~r~~----------~~~~~~~~~l~~~i~~~l~~~i 206 (477)
..|.|||.+.-+ .++|| ||+||++|+| +..||.-...++ ..........+..+.+.+..++
T Consensus 202 ~pyRAPELf~vk~~~ti~ertDI-WSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~ml 280 (302)
T KOG2345|consen 202 IPYRAPELFNVKSHCTITERTDI-WSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSML 280 (302)
T ss_pred CcccCchheecccCcccccccch-hhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHh
Confidence 689999998765 78999 9999999999 668886422110 0111111225556666666666
Q ss_pred hcccCCCCccc
Q psy6508 207 CRHEFSNFQVD 217 (477)
Q Consensus 207 ~~~~~Pr~~i~ 217 (477)
..++..|+.+.
T Consensus 281 qvdP~qRP~i~ 291 (302)
T KOG2345|consen 281 QVDPNQRPTIP 291 (302)
T ss_pred cCCcccCCCHH
Confidence 66666666653
No 187
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.90 E-value=4.5e-24 Score=207.38 Aligned_cols=166 Identities=18% Similarity=0.190 Sum_probs=133.4
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQCQQF 83 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~~~~i 83 (477)
..|++|++.... ......+.+|+.+++.++||||+++++++..+...|+||||+++++|..++.+ .+.+++..+..+
T Consensus 45 ~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i 122 (274)
T cd05076 45 LRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITV 122 (274)
T ss_pred eeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHH
Confidence 468999886542 23345788999999999999999999999999999999999999999999875 457899999999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeeccCc------ceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKNNT------LKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~------~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
+.|++.||+|||++||+||||||+||+++..+ ..+...|||....... .....++..|+|||...+.
T Consensus 123 ~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~------~~~~~~~~~~~aPe~~~~~~ 196 (274)
T cd05076 123 AQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS------REERVERIPWIAPECVPGGN 196 (274)
T ss_pred HHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc------ccccccCCcccCchhhcCCC
Confidence 99999999999999999999999999996432 2345568887643221 1123455679999977542
Q ss_pred ---CcccccCcceEEEEEE---eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ |++|+++||+ +..||..
T Consensus 197 ~~~~~~Dv-~slG~~l~el~~~g~~p~~~ 224 (274)
T cd05076 197 SLSTAADK-WSFGTTLLEICFDGEVPLKE 224 (274)
T ss_pred CCCcHHHH-HHHHHHHHHHHhCCCCCccc
Confidence 67899 9999999997 5567653
No 188
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.90 E-value=5.4e-24 Score=210.62 Aligned_cols=175 Identities=18% Similarity=0.247 Sum_probs=143.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
.+++.||+|+++.........+.+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++... ..+++..
T Consensus 23 ~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~ 102 (314)
T cd08216 23 PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELA 102 (314)
T ss_pred CCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHH
Confidence 36899999999876555666778999999999999999999999999999999999999999999999763 3589999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcc-----cccCCeEEEeccccccccC
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAY-----IEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~-----~~~g~t~v~~~~y~ppE~~ 153 (477)
+..++.|++.||+|||++||+||||||+||+++. +.+++ .|||.+........ .....+..++..|+|||..
T Consensus 103 ~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 180 (314)
T cd08216 103 IAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVL--SGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVL 180 (314)
T ss_pred HHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEE--ecCccceeeccccccccccccccccccccccccCHHHh
Confidence 9999999999999999999999999999999976 44454 48887653322111 1122334556679999987
Q ss_pred CCC-----CcccccCcceEEEEEE--eeecccc
Q psy6508 154 SSK-----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 154 ~~~-----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.+. .++|+ ||+|++++|+ +..||..
T Consensus 181 ~~~~~~~~~~~Di-ws~G~il~el~~g~~pf~~ 212 (314)
T cd08216 181 QQNLQGYNEKSDI-YSVGITACELANGHVPFKD 212 (314)
T ss_pred cCCCCCCCcchhH-HHHHHHHHHHHhCCCCCCC
Confidence 542 67899 9999999999 6778864
No 189
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.90 E-value=3.5e-24 Score=207.22 Aligned_cols=172 Identities=19% Similarity=0.319 Sum_probs=136.1
Q ss_pred EEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC------CeEEEEEecCCCCCHHHHHHhC------C
Q psy6508 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE------RYVYIILEYCDGGDLCSFIRSH------E 73 (477)
Q Consensus 6 ~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------~~~~lv~e~~~g~sL~~~l~~~------~ 73 (477)
.||+|.++.........+.+.+|+.+++.++||||+++++.+... ...+++|||+++++|.+++... .
T Consensus 28 ~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~ 107 (272)
T cd05075 28 KVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQ 107 (272)
T ss_pred eEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcc
Confidence 699999887665666678899999999999999999999976432 2578999999999999987421 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccC
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~ 153 (477)
.+++..+..++.|++.||.|||++||+||||||+||+++.+. .+.++|||.+...........+.....+..|++||..
T Consensus 108 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 186 (272)
T cd05075 108 YLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM-NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESL 186 (272)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC-CEEECCCCcccccCcccceecCCcccCCcccCCHHHc
Confidence 488999999999999999999999999999999999997643 3445699988654332222233334455679999988
Q ss_pred CCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 154 SSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 154 ~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.+. .++|+ ||+|+++||+ +..||.+
T Consensus 187 ~~~~~~~~~Di-~slG~il~el~~~g~~p~~~ 217 (272)
T cd05075 187 ADRVYTTKSDV-WSFGVTMWEIATRGQTPYPG 217 (272)
T ss_pred cCCCcChHHHH-HHHHHHHHHHHcCCCCCCCC
Confidence 765 67899 9999999998 4567653
No 190
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.90 E-value=1.3e-24 Score=217.65 Aligned_cols=174 Identities=22% Similarity=0.330 Sum_probs=136.5
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEe-CCeEEEEEecCCCCCHHHHHHhC--------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWD-ERYVYIILEYCDGGDLCSFIRSH-------- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~-~~~~~lv~e~~~g~sL~~~l~~~-------- 72 (477)
+++.||+|+++... .....+.+.+|+.+++++ +||||+++++++.. +..++++|||+++++|.+++...
T Consensus 36 ~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~ 114 (337)
T cd05054 36 SCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYR 114 (337)
T ss_pred ccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccc
Confidence 46789999987543 334456788999999999 89999999998764 45789999999999999998642
Q ss_pred -----------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy6508 73 -----------------------------------------------------EKLSEFQCQQFVRQLVLALKFLRENNV 99 (477)
Q Consensus 73 -----------------------------------------------------~~l~~~~~~~i~~qi~~aL~~LH~~gi 99 (477)
..+++..+..++.|++.||.|||++||
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i 194 (337)
T cd05054 115 NKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKC 194 (337)
T ss_pred cccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 257889999999999999999999999
Q ss_pred EEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE---e
Q psy6508 100 CHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF---K 173 (477)
Q Consensus 100 vHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~---~ 173 (477)
+||||||+||+++.+. .+.++|||.+...........+.+..++..|+|||...+. .++|+ ||+|++++|+ +
T Consensus 195 vHrDikp~Nill~~~~-~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~SlGv~l~el~t~g 272 (337)
T cd05054 195 IHRDLAARNILLSENN-VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDV-WSFGVLLWEIFSLG 272 (337)
T ss_pred ecCCCCcceEEEeCCC-cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccH-HHHHHHHHHHHHcC
Confidence 9999999999998643 3444699988654322111122233445679999987665 67899 9999999997 5
Q ss_pred eecccc
Q psy6508 174 FAPFAS 179 (477)
Q Consensus 174 ~~Pf~~ 179 (477)
..||.+
T Consensus 273 ~~p~~~ 278 (337)
T cd05054 273 ASPYPG 278 (337)
T ss_pred CCCCCC
Confidence 577764
No 191
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.90 E-value=1.5e-24 Score=208.04 Aligned_cols=170 Identities=17% Similarity=0.253 Sum_probs=137.4
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQCQQ 82 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~~~~ 82 (477)
..||||.+...... ...+.+.+|+.++++++||||+++++.+.. ...+++|||+++++|.+++.+.. .+++..+..
T Consensus 24 ~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 101 (257)
T cd05040 24 IPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCD 101 (257)
T ss_pred eEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHH
Confidence 36999999876544 556789999999999999999999999888 89999999999999999998754 689999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCC-cccccCCeEEEeccccccccCCCC---Cc
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGS-AYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs-~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+...... ..........++..|.|||...+. .+
T Consensus 102 ~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~ 180 (257)
T cd05040 102 YAVQIANGMRYLESKRFIHRDLAARNILLASDD-KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHA 180 (257)
T ss_pred HHHHHHHHHHHHHhCCccccccCcccEEEecCC-EEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCch
Confidence 999999999999999999999999999998653 3444599987654321 111112223445679999987654 66
Q ss_pred ccccCcceEEEEEE---eeeccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~ 178 (477)
+|+ ||+|+++++| +..||.
T Consensus 181 ~Di-~slG~~l~el~t~g~~p~~ 202 (257)
T cd05040 181 SDV-WMFGVTLWEMFTYGEEPWA 202 (257)
T ss_pred hhh-HHHHHHHHHHHhCCCCCCC
Confidence 899 9999999998 556664
No 192
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.90 E-value=9.3e-25 Score=210.53 Aligned_cols=176 Identities=21% Similarity=0.309 Sum_probs=142.6
Q ss_pred CCCcEEEEEEcccCCCC----hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVS----ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~----~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~ 77 (477)
.+|+.+|+|.++..... ....+.+.+|+.++++++||||+++++++.+.+..++++||++|++|.+++.+.+.+++
T Consensus 22 ~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 101 (265)
T cd06631 22 NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPE 101 (265)
T ss_pred cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCH
Confidence 46788999998765322 23346789999999999999999999999999999999999999999999988778999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCc----ccccCCeEEEeccccccccC
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSA----YIEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~----~~~~g~t~v~~~~y~ppE~~ 153 (477)
..+..++.|++.||.|||+.|++|+||+|+||+++++. .+.+.|||.+....... .........++..|.|||..
T Consensus 102 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 180 (265)
T cd06631 102 PVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG-IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVI 180 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC-eEEeccchhhHhhhhccccccccccccccCCCccccChhhh
Confidence 99999999999999999999999999999999997542 34445998875432111 11111234567789999998
Q ss_pred CCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 154 SSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 154 ~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.+. .++|+ |++|++++++ +..||..
T Consensus 181 ~~~~~~~~~Dv-~slG~~~~~l~~g~~p~~~ 210 (265)
T cd06631 181 NESGYGRKSDI-WSIGCTVFEMATGKPPLAS 210 (265)
T ss_pred cCCCCcchhhH-HHHHHHHHHHHhCCCcccc
Confidence 765 67899 9999999999 6678764
No 193
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.90 E-value=1.5e-24 Score=213.69 Aligned_cols=174 Identities=22% Similarity=0.280 Sum_probs=138.1
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
++..||+|.++... .....+.+.+|+.+++++ +||||+++++.+...+..|++|||+++++|.+++.... .+++..
T Consensus 64 ~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~ 142 (302)
T cd05055 64 AVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLED 142 (302)
T ss_pred ceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHH
Confidence 45579999987553 234456789999999999 79999999999999999999999999999999997643 389999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++|+||||+||+++.+. .+..+|||.+.............+..++..|+|||...+.
T Consensus 143 ~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 221 (302)
T cd05055 143 LLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK-IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYT 221 (302)
T ss_pred HHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC-eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCC
Confidence 999999999999999999999999999999997653 4445699987543221111111122345679999987655
Q ss_pred CcccccCcceEEEEEE---eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||.+
T Consensus 222 ~~~Di-wslGvil~el~t~g~~p~~~ 246 (302)
T cd05055 222 FESDV-WSYGILLWEIFSLGSNPYPG 246 (302)
T ss_pred cHhHH-HHHHHHHHHHHhCCCCCcCC
Confidence 67899 9999999997 5677754
No 194
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.90 E-value=7.3e-24 Score=202.52 Aligned_cols=173 Identities=25% Similarity=0.345 Sum_probs=139.4
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQ 82 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~ 82 (477)
++.||+|.+...... ...+.+.+|+.++++++||||+++++++...+..|++|||++|++|.+++.+. ..+++..+..
T Consensus 19 ~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~ 97 (251)
T cd05041 19 NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQ 97 (251)
T ss_pred CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHH
Confidence 789999998765433 45568999999999999999999999999999999999999999999999663 4688999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Ccc
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSL 159 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~ 159 (477)
++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+.......+...+.....+..|.|||...+. .++
T Consensus 98 ~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~-~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~ 176 (251)
T cd05041 98 MSLDAAAGMEYLESKNCIHRDLAARNCLVGENN-VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSES 176 (251)
T ss_pred HHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC-cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcch
Confidence 999999999999999999999999999997643 3344599987654422222222233345569999987655 678
Q ss_pred cccCcceEEEEEE---eeecccc
Q psy6508 160 EYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 160 Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|+ |++|+++|++ +..||.+
T Consensus 177 Di-~slG~i~~~l~t~~~~p~~~ 198 (251)
T cd05041 177 DV-WSYGILLWETFSLGDTPYPG 198 (251)
T ss_pred hH-HHHHHHHHHHHhccCCCCcc
Confidence 99 9999999997 4566654
No 195
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=5.5e-24 Score=209.75 Aligned_cols=172 Identities=20% Similarity=0.364 Sum_probs=136.3
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----------
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---------- 72 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------- 72 (477)
+..||+|.+.... .....+++.+|+.+++.+ +||||+++++.+......|++|||+++++|.+++.+.
T Consensus 47 ~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 125 (304)
T cd05101 47 AVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 125 (304)
T ss_pred ceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccc
Confidence 4579999986542 344557789999999999 8999999999999999999999999999999999763
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecc
Q psy6508 73 ------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV 146 (477)
Q Consensus 73 ------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~ 146 (477)
..++...+..++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+................++..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~-~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~ 204 (304)
T cd05101 126 IARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENN-VMKIADFGLARDVNNIDYYKKTTNGRLPVK 204 (304)
T ss_pred cccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCC-cEEECCCccceecccccccccccCCCCCce
Confidence 2467888999999999999999999999999999999997643 344469998865433222122222334567
Q ss_pred ccccccCCCC---CcccccCcceEEEEEE---eeeccc
Q psy6508 147 FEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 147 y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
|+|||...+. .++|+ ||+|+++|++ +..||.
T Consensus 205 y~aPE~~~~~~~~~~~Di-~slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 205 WMAPEALFDRVYTHQSDV-WSFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred eeCchhhccCCCCchhhH-HHHHHHHHHHHcCCCCCcc
Confidence 9999987655 67899 9999999998 345554
No 196
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.90 E-value=6.4e-25 Score=212.02 Aligned_cols=174 Identities=21% Similarity=0.273 Sum_probs=139.4
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-------CCCC
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-------EKLS 76 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-------~~l~ 76 (477)
++.||||.+.... .......+.+|+.+++.++||||+++++++......+++|||+++++|.+++... ..++
T Consensus 26 ~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~ 104 (269)
T cd05044 26 PIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLT 104 (269)
T ss_pred ceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCcccc
Confidence 3678999886542 2344567899999999999999999999999999999999999999999999752 2378
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCc----ceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT----LKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~----~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
+..+..++.|++.||.|||++|++|+||||+||+++.+. ..+...|||.+.............+...+..|+|||.
T Consensus 105 ~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 184 (269)
T cd05044 105 LKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPES 184 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHH
Confidence 899999999999999999999999999999999997643 3455669998865443332222223445567999998
Q ss_pred CCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
..+. .++|+ |++|+++|++ +..||..
T Consensus 185 ~~~~~~~~~~Dv-~slG~il~ellt~g~~p~~~ 216 (269)
T cd05044 185 LLDGKFTTQSDV-WSFGVLMWEILTLGQQPYPA 216 (269)
T ss_pred HccCCcccchhH-HHHHHHHHHHHHcCCCCCcc
Confidence 7655 77899 9999999997 5567753
No 197
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.90 E-value=4.9e-24 Score=207.66 Aligned_cols=173 Identities=25% Similarity=0.348 Sum_probs=139.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC---CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---~~l~~~ 78 (477)
.+++.||+|.++.........+.+.+|+.++++++||||+++++++..++..|+||||++ ++|.+++... ..+++.
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~ 101 (285)
T cd07861 23 KTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAE 101 (285)
T ss_pred CCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHH
Confidence 468899999987654444445678899999999999999999999999999999999998 6899888653 468999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.++.++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+....... .......++..|+|||...+.
T Consensus 102 ~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~ 178 (285)
T cd07861 102 LVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG-VIKLADFGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPR 178 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC-cEEECcccceeecCCCc--ccccCCcccccccChHHhcCCCC
Confidence 9999999999999999999999999999999997643 23445999875432211 112234567789999987543
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||.+
T Consensus 179 ~~~~~Dv-~slG~il~~l~tg~~~~~~ 204 (285)
T cd07861 179 YSTPVDI-WSIGTIFAEMATKKPLFHG 204 (285)
T ss_pred cCcHHHH-HHHHHHHHHHHHCCCCCCC
Confidence 56899 9999999999 6677763
No 198
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.90 E-value=1.6e-23 Score=203.67 Aligned_cols=175 Identities=19% Similarity=0.258 Sum_probs=139.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe--CCeEEEEEecCCCCCHHHHHHhCC-CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSHE-KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~ 78 (477)
++++.||+|+++..... ...+.+.+|+.+++.++||||+++++++.. ....+++|||+++++|.+++.... .+++.
T Consensus 31 ~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~ 109 (284)
T cd05038 31 NTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK 109 (284)
T ss_pred CCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHH
Confidence 35789999998766443 356789999999999999999999999877 567999999999999999997754 58999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCC-cccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGS-AYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs-~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+..++.|++.||+|||++|++||||||+||+++.+. .+.+.|||.+...... ..............|.|||...+.
T Consensus 110 ~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~ 188 (284)
T cd05038 110 RLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED-LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSK 188 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC-CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCC
Confidence 9999999999999999999999999999999997652 4455699988655422 111111122333458999987654
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++|+ +..||..
T Consensus 189 ~~~~~Di-~slG~~l~el~tg~~p~~~ 214 (284)
T cd05038 189 FSSASDV-WSFGVTLYELFTYGDPSQS 214 (284)
T ss_pred CCcccch-HHHhhhhheeeccCCCccc
Confidence 67899 9999999999 4566543
No 199
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.90 E-value=5.7e-24 Score=212.10 Aligned_cols=175 Identities=18% Similarity=0.240 Sum_probs=139.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
.+|+.||+|++..........+.+.+|+.+++.++||||+++++++..++..|+++||+.+++|.+++... ..+++..
T Consensus 23 ~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~ 102 (328)
T cd08226 23 PTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEAL 102 (328)
T ss_pred CCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHH
Confidence 47899999999876656666678999999999999999999999999999999999999999999999864 3589999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceeccc--CCc---ccccCCeEEEeccccccccC
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAK--GSA---YIEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~--gs~---~~~~g~t~v~~~~y~ppE~~ 153 (477)
+..++.|++.||.|||++|++||||||+||+++.+ .+++ .+||...... +.. .........++..|+|||..
T Consensus 103 ~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 180 (328)
T cd08226 103 IGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSL--SGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELL 180 (328)
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEE--echHHHhhhhccCccccccccccccccCccCccChhhh
Confidence 99999999999999999999999999999999764 3444 4666432211 111 00111112234569999998
Q ss_pred CCC-----CcccccCcceEEEEEE--eeecccc
Q psy6508 154 SSK-----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 154 ~~~-----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.+. .++|+ |++|++++++ +..||..
T Consensus 181 ~~~~~~~~~~~Di-wslG~~l~el~~g~~p~~~ 212 (328)
T cd08226 181 RQDLYGYNVKSDI-YSVGITACELATGRVPFQD 212 (328)
T ss_pred cCCCCCCCchhhH-HHHHHHHHHHHhCCCCCCC
Confidence 653 56899 9999999999 6788864
No 200
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.90 E-value=1.3e-24 Score=211.64 Aligned_cols=167 Identities=22% Similarity=0.284 Sum_probs=138.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.+.... .....+.+.+|+.++++++||||+++++.+...+..+++|||+++++|..+ ..+++..+.
T Consensus 24 ~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~ 98 (279)
T cd06619 24 LTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLG 98 (279)
T ss_pred CCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHH
Confidence 468899999986553 344456799999999999999999999999999999999999999999754 357899999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++|+||||+||+++.+. .+.+.|||.+....... ..+..++..|+|||...+. .+
T Consensus 99 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~-~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ 173 (279)
T cd06619 99 RIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG-QVKLCDFGVSTQLVNSI----AKTYVGTNAYMAPERISGEQYGIH 173 (279)
T ss_pred HHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC-CEEEeeCCcceeccccc----ccCCCCChhhcCceeecCCCCCCc
Confidence 9999999999999999999999999999997653 34445999876543221 1234677889999988765 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|+++|++ +..||..
T Consensus 174 ~Dv-wslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 174 SDV-WSLGISFMELALGRFPYPQ 195 (279)
T ss_pred chH-HHHHHHHHHHHhCCCCchh
Confidence 899 9999999999 6788864
No 201
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.90 E-value=1.5e-24 Score=207.95 Aligned_cols=173 Identities=22% Similarity=0.345 Sum_probs=139.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe-CCeEEEEEecCCCCCHHHHHHhC--CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD-ERYVYIILEYCDGGDLCSFIRSH--EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~ 78 (477)
.+++.||+|.+..........+.+.+|+.++++++|||++++++.+.. +..+|++|||+++++|.+++... ..+++.
T Consensus 23 ~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~ 102 (257)
T cd08223 23 TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPEN 102 (257)
T ss_pred CCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHH
Confidence 357889999997766555566778999999999999999999998764 45689999999999999999763 358999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
++..++.|++.|+.+||++|++||||||+||+++.+. .+.+.|||.+....... ....+..+++.|+|||...+.
T Consensus 103 ~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~-~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~ 179 (257)
T cd08223 103 QVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN-IIKVGDLGIARVLENQC--DMASTLIGTPYYMSPELFSNKPY 179 (257)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC-cEEEecccceEEecccC--CccccccCCcCccChhHhcCCCC
Confidence 9999999999999999999999999999999997643 34445999875442211 112234567789999998766
Q ss_pred -CcccccCcceEEEEEE--eeeccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|++++++ +..||.
T Consensus 180 ~~~~Dv-~slG~il~~l~~g~~~~~ 203 (257)
T cd08223 180 NYKSDV-WALGCCVYEMATLKHAFN 203 (257)
T ss_pred Cchhhh-HHHHHHHHHHHcCCCCCC
Confidence 67899 9999999999 556665
No 202
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.90 E-value=2.8e-24 Score=210.89 Aligned_cols=165 Identities=22% Similarity=0.274 Sum_probs=132.7
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-----------
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE----------- 73 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----------- 73 (477)
..||+|.++... .....+.+.+|++++++++|||++++++++...+..++||||+++++|.+++....
T Consensus 45 ~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 123 (295)
T cd05097 45 VLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNI 123 (295)
T ss_pred eEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccC
Confidence 358999987543 34455679999999999999999999999999999999999999999999986532
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 74 -KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 74 -~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++++. .+.++|||.+................++..|+|||.
T Consensus 124 ~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 202 (295)
T cd05097 124 PSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHY-TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWES 202 (295)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCC-cEEecccccccccccCcceeccCcCcCceeecChhh
Confidence 367888999999999999999999999999999999997653 344559998764332222222222334567999998
Q ss_pred CCCC---CcccccCcceEEEEEE
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF 172 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~ 172 (477)
..+. .++|+ ||+|++++++
T Consensus 203 ~~~~~~~~~~Dv-wSlG~~l~el 224 (295)
T cd05097 203 ILLGKFTTASDV-WAFGVTLWEM 224 (295)
T ss_pred hccCCcCchhhH-HHHHHHHHHH
Confidence 7654 77899 9999999998
No 203
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.90 E-value=4.6e-24 Score=210.89 Aligned_cols=170 Identities=23% Similarity=0.269 Sum_probs=141.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.++... .....+++.+|+.++++++||||+++++++..++.+|++|||++|++|.+++++.+.+++..+.
T Consensus 24 ~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~ 102 (308)
T cd06615 24 PSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILG 102 (308)
T ss_pred CCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHH
Confidence 467889999986543 3444567889999999999999999999999999999999999999999999888889999999
Q ss_pred HHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||.|||+ .|++||||||+||+++++. .+.+.|||.+...... ...+..++..|.|||...+. .
T Consensus 103 ~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~ 177 (308)
T cd06615 103 KISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYTV 177 (308)
T ss_pred HHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC-cEEEccCCCccccccc----ccccCCCCcCccChhHhcCCCCCc
Confidence 999999999999998 5999999999999997653 2444599987543221 12344567789999987655 6
Q ss_pred cccccCcceEEEEEE--eeeccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
++|+ |++|++++++ +..||.
T Consensus 178 ~~Di-wslG~~l~~l~~g~~p~~ 199 (308)
T cd06615 178 QSDI-WSLGLSLVEMAIGRYPIP 199 (308)
T ss_pred cchH-HHHHHHHHHHHhCCCCCC
Confidence 7899 9999999999 556765
No 204
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.90 E-value=8.2e-24 Score=204.04 Aligned_cols=176 Identities=24% Similarity=0.299 Sum_probs=140.6
Q ss_pred CCCcEEEEEEcccCCCC---hhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVS---ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
++|+.||||.+...... ....+.+.+|+.++++++||||+++++++.+. ..++++|||++|++|.+++.+.+.++
T Consensus 25 ~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~ 104 (265)
T cd06652 25 DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALT 104 (265)
T ss_pred CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCC
Confidence 46889999988654322 23456788999999999999999999988763 57899999999999999998877889
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc-ccCCeEEEeccccccccCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI-EQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~-~~g~t~v~~~~y~ppE~~~~ 155 (477)
+..+..++.|++.||.|||++|++|+||||+||+++++. .+.+.|||.+......... .......++..|+|||...+
T Consensus 105 ~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~-~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 183 (265)
T cd06652 105 ENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG-NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISG 183 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC-CEEECcCccccccccccccccccccCCCCccccChhhhcC
Confidence 999999999999999999999999999999999998643 3445699987654322111 11123446678999998765
Q ss_pred C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ |++|+++|++ +..||..
T Consensus 184 ~~~~~~~Dv-~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 184 EGYGRKADI-WSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred CCCCcchhH-HHHHHHHHHHhhCCCCCCc
Confidence 5 67899 9999999999 6677753
No 205
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.90 E-value=9.4e-25 Score=214.55 Aligned_cols=171 Identities=24% Similarity=0.348 Sum_probs=140.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.+...... ..+.+.+|+.+++.++||||+++++.+..+...|+||||++|++|.+++.+ ..+++..+.
T Consensus 43 ~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~ 119 (296)
T cd06654 43 ATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIA 119 (296)
T ss_pred CCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh-cCCCHHHHH
Confidence 46889999998765433 346688999999999999999999999999999999999999999999875 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+....... .......++..|+|||...+. .+
T Consensus 120 ~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~-~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~ 196 (296)
T cd06654 120 AVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPK 196 (296)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC-CEEECccccchhccccc--cccCcccCCccccCHHHHcCCCCCcc
Confidence 9999999999999999999999999999997653 34445999875432211 111234567789999987665 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|+++|++ +..||..
T Consensus 197 ~Dv-~s~Gvil~~l~~g~~pf~~ 218 (296)
T cd06654 197 VDI-WSLGIMAIEMIEGEPPYLN 218 (296)
T ss_pred chH-HHHHHHHHHHHhCCCCCCC
Confidence 899 9999999999 7788864
No 206
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.90 E-value=1.7e-24 Score=208.23 Aligned_cols=172 Identities=21% Similarity=0.319 Sum_probs=137.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
++++.||+|.+..... ..+.+.+|+.+++.++||||+++++.+...+..+++|||+++++|.+++.+. ..+++..
T Consensus 28 ~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 104 (261)
T cd05072 28 NNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPK 104 (261)
T ss_pred cCCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHH
Confidence 3567799998765432 3467899999999999999999999999999999999999999999999753 4688899
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++||||||+||+++++. .+.+.|||.+......... ......++..|+|||...+.
T Consensus 105 ~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~-~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~ 182 (261)
T cd05072 105 LIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFT 182 (261)
T ss_pred HHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC-cEEECCCccceecCCCcee-ccCCCccceecCCHHHhccCCCC
Confidence 999999999999999999999999999999998753 3445699988654432211 11122344569999987655
Q ss_pred CcccccCcceEEEEEE---eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 183 ~~~Di-~slG~~l~~l~t~g~~p~~~ 207 (261)
T cd05072 183 IKSDV-WSFGILLYEIVTYGKIPYPG 207 (261)
T ss_pred hhhhh-hhhHHHHHHHHccCCCCCCC
Confidence 57899 9999999998 4467653
No 207
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.90 E-value=3.1e-24 Score=216.40 Aligned_cols=170 Identities=23% Similarity=0.369 Sum_probs=138.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC------CeEEEEEecCCCCCHHHHHHhCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE------RYVYIILEYCDGGDLCSFIRSHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------~~~~lv~e~~~g~sL~~~l~~~~~l 75 (477)
.+++.||||++..........+.+.+|+.+++.++||||+++++++... ...|++|||++ ++|.+.+.. .+
T Consensus 40 ~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~l 116 (355)
T cd07874 40 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM--EL 116 (355)
T ss_pred CCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc-ccHHHHHhh--cC
Confidence 3688999999977655555567788999999999999999999988643 35799999997 678887764 58
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
++..+..++.|++.||.|||++||+||||||+||+++.+. .+.++|||++.....+. ...+..++..|+|||...+
T Consensus 117 ~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~-~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~ 192 (355)
T cd07874 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILG 192 (355)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC-CEEEeeCcccccCCCcc---ccCCccccCCccCHHHHcC
Confidence 8999999999999999999999999999999999997643 34445999986543322 1234567889999999876
Q ss_pred C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|+++|+| +..||.+
T Consensus 193 ~~~~~~~Di-wslG~il~el~~g~~pf~~ 220 (355)
T cd07874 193 MGYKENVDI-WSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred CCCCchhhH-HHHHHHHHHHHhCCCCCCC
Confidence 5 67899 9999999999 6677764
No 208
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.90 E-value=6.1e-24 Score=205.04 Aligned_cols=173 Identities=24% Similarity=0.296 Sum_probs=137.0
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~ 81 (477)
+...||+|.++... .......+.+|+.++++++||||+++++.+...+..+++|||+++++|.+++... +.+++..+.
T Consensus 31 ~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~ 109 (266)
T cd05033 31 KEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLV 109 (266)
T ss_pred CcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHH
Confidence 34679999986543 3444567899999999999999999999999999999999999999999999764 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++||+||||||+||+++++. .+.+.|||.+....+............+..|+|||...+. .+
T Consensus 110 ~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~ 188 (266)
T cd05033 110 GMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL-VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSA 188 (266)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC-CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccc
Confidence 9999999999999999999999999999998653 2344599988765421110001111223569999988765 67
Q ss_pred ccccCcceEEEEEE---eeeccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~ 178 (477)
+|+ |++|+++|++ +..||.
T Consensus 189 ~Dv-~slG~~l~~l~~~g~~p~~ 210 (266)
T cd05033 189 SDV-WSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred cch-HHHHHHHHHHHccCCCCCC
Confidence 899 9999999996 556664
No 209
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.90 E-value=1.5e-24 Score=210.18 Aligned_cols=171 Identities=28% Similarity=0.365 Sum_probs=137.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
+.+.|++|.+.... .....+.+.+|+.++++++||||+++++++......|++|||+++++|.+++....
T Consensus 34 ~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 112 (275)
T cd05046 34 GETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPP 112 (275)
T ss_pred CcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhccccccccccc
Confidence 45679999876543 23345779999999999999999999999999899999999999999999998755
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
.+++..+..++.|++.||+|||++|++||||||+||+++.+ .+++ .+||.+.......+. ......++..|+|||.
T Consensus 113 ~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l--~~~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~ 189 (275)
T cd05046 113 PLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKV--SLLSLSKDVYNSEYY-KLRNALIPLRWLAPEA 189 (275)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEE--cccccccccCccccc-ccCCceeEEeecChhh
Confidence 68999999999999999999999999999999999999764 4444 477776543332221 2233456667999998
Q ss_pred CCCC---CcccccCcceEEEEEE---eeeccc
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
..+. .++|+ ||+|+++|++ +..||.
T Consensus 190 ~~~~~~~~~~Di-~slG~~l~~l~~~~~~p~~ 220 (275)
T cd05046 190 VQEDDFSTKSDV-WSFGVLMWEVFTQGELPFY 220 (275)
T ss_pred hccCCCCchhhH-HHHHHHHHHHHhCCCCCcc
Confidence 7654 67899 9999999987 345664
No 210
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.90 E-value=4.6e-24 Score=210.83 Aligned_cols=172 Identities=23% Similarity=0.358 Sum_probs=137.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~ 80 (477)
.+++.||+|.++..... .....+.+|+.++++++||||+++++++..++..|+||||++ ++|.+++...+ .+++..+
T Consensus 29 ~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~ 106 (309)
T cd07872 29 LTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-KDLKQYMDDCGNIMSMHNV 106 (309)
T ss_pred CCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC-CCHHHHHHhcCCCCCHHHH
Confidence 36788999998765422 223457789999999999999999999999999999999998 68988887643 5889999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.++.|++.||.|||++||+||||||+||+++.+. .+.++|||.+....... .......++..|+|||...+.
T Consensus 107 ~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ 183 (309)
T cd07872 107 KIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG-ELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSSEYS 183 (309)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-CEEECccccceecCCCc--cccccccccccccCCHHHhCCCCCC
Confidence 99999999999999999999999999999997642 33445999875432211 112234667889999987543
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||.+
T Consensus 184 ~~~Di-wslG~il~el~tg~~pf~~ 207 (309)
T cd07872 184 TQIDM-WGVGCIFFEMASGRPLFPG 207 (309)
T ss_pred cHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6677764
No 211
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=9.6e-24 Score=209.11 Aligned_cols=173 Identities=21% Similarity=0.367 Sum_probs=136.8
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----------
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---------- 72 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------- 72 (477)
+..||+|.++... .......+.+|+.+++++ +||||+++++++..++..|++|||+++++|.+++...
T Consensus 44 ~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~ 122 (314)
T cd05099 44 TVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFD 122 (314)
T ss_pred ceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCccccccc
Confidence 4579999987543 344456789999999999 6999999999999999999999999999999999753
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecc
Q psy6508 73 ------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV 146 (477)
Q Consensus 73 ------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~ 146 (477)
..+++..+..++.|++.||.|||++|++||||||+||+++.+. ++.+.|||.+................++..
T Consensus 123 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~ 201 (314)
T cd05099 123 ITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDN-VMKIADFGLARGVHDIDYYKKTSNGRLPVK 201 (314)
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCC-cEEEccccccccccccccccccccCCCCcc
Confidence 2478899999999999999999999999999999999997643 344459998875543322221112223356
Q ss_pred ccccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 147 FEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 147 y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|+|||...+. .++|+ |++|+++|++ +..||..
T Consensus 202 y~aPE~~~~~~~~~~~Di-wslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 202 WMAPEALFDRVYTHQSDV-WSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred ccCHHHHccCCcCccchh-hHHHHHHHHHHhCCCCCCCC
Confidence 9999987655 67899 9999999997 4566653
No 212
>KOG0984|consensus
Probab=99.90 E-value=4.2e-24 Score=188.53 Aligned_cols=170 Identities=24% Similarity=0.290 Sum_probs=140.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHH----hCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIR----SHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~----~~~~l~ 76 (477)
.+|...|+|.+...- +.+..++..+|+.+..+- .+|++|.+||....+..+||.||.+. .||..+.+ +.+.+|
T Consensus 69 ~sg~imAvKri~~tv-n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ip 146 (282)
T KOG0984|consen 69 QSGTIMAVKRIRATV-NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIP 146 (282)
T ss_pred cCCeEEEEeeehhhc-ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCc
Confidence 478899999997664 445567788899886655 79999999999999999999999997 88887654 456899
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CcEEccCCCCceeeccCcceeecccccceecccCCcccccCCe-EEEeccccccccCC
Q psy6508 77 EFQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNT-KVICSVFEPREIPS 154 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t-~v~~~~y~ppE~~~ 154 (477)
+..+-+|+..++.||.|||++ .++|||+||+|||++.++ ++..||||++.....|-- .| ..||..|+|||...
T Consensus 147 E~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G-qVKiCDFGIsG~L~dSiA----kt~daGCkpYmaPEri~ 221 (282)
T KOG0984|consen 147 EDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG-QVKICDFGISGYLVDSIA----KTMDAGCKPYMAPERIN 221 (282)
T ss_pred hHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC-cEEEcccccceeehhhhH----HHHhcCCCccCChhhcC
Confidence 999999999999999999987 899999999999998754 444569999876555432 23 57899999999887
Q ss_pred CC-------CcccccCcceEEEEEE--eeecccc
Q psy6508 155 SK-------TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 155 ~~-------~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.. .++|+ ||+|+.++|+ +..||..
T Consensus 222 ~e~n~~gY~vksDv-WSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 222 PELNQKGYSVKSDV-WSLGITMIEMAILRFPYES 254 (282)
T ss_pred cccCcccceeehhh-hhhhhhhhhhhhccccccc
Confidence 65 57899 9999999999 5677764
No 213
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.90 E-value=9.3e-24 Score=203.06 Aligned_cols=173 Identities=19% Similarity=0.298 Sum_probs=133.6
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~~~ 81 (477)
.+..||+|++.... .....+.+.+|+.++++++||||+++++++. ....++||||+++++|.+++.. ...+++..+.
T Consensus 21 ~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 98 (257)
T cd05115 21 KQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVV 98 (257)
T ss_pred CceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHH
Confidence 35579999986553 3444567999999999999999999999875 4578999999999999999975 3468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCC-cccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGS-AYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs-~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+...... ...........+..|+|||..... .
T Consensus 99 ~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 177 (257)
T cd05115 99 ELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH-YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSS 177 (257)
T ss_pred HHHHHHHHHHHHHHhcCeeecccchheEEEcCCC-cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCc
Confidence 9999999999999999999999999999997653 3334599987533211 111111111223579999987654 5
Q ss_pred cccccCcceEEEEEE---eeecccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
++|+ ||+|+++|++ +..||..
T Consensus 178 ~~Di-~slG~~l~el~~~g~~p~~~ 201 (257)
T cd05115 178 RSDV-WSYGITMWEAFSYGQKPYKK 201 (257)
T ss_pred hhhH-HHHHHHHHHHhcCCCCCcCc
Confidence 7899 9999999996 4567753
No 214
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.90 E-value=4.7e-24 Score=211.35 Aligned_cols=176 Identities=23% Similarity=0.399 Sum_probs=142.8
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~ 78 (477)
.+++.||+|.+....... ...+.+.+|+.+++.++||||+++++.+......|++|||+.|++|.+++... ..+++.
T Consensus 24 ~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~ 103 (316)
T cd05574 24 GTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEE 103 (316)
T ss_pred CCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHH
Confidence 368899999998765443 35567899999999999999999999999999999999999999999999764 468999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc-----------------------
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI----------------------- 135 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~----------------------- 135 (477)
.++.++.|++.||.|||+.|++||||||+||+++.++ ++.+.|||.+.........
T Consensus 104 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (316)
T cd05574 104 VARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG-HIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFS 182 (316)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC-CEEEeecchhhcccccccccccccccccccccccccchhhhc
Confidence 9999999999999999999999999999999998653 3444588876543211100
Q ss_pred ----ccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 136 ----EQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 136 ----~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
...+..+++..|+|||...+. .++|+ ||+|+++|++ +..||.+
T Consensus 183 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di-~slG~ll~~l~~g~~pf~~ 234 (316)
T cd05574 183 EEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDW-WTLGILLYEMLYGTTPFKG 234 (316)
T ss_pred ccccCCCCCCcCccCCcCHHHHcCCCCCchHHH-HHHHHHHHHHhhCCCCCCC
Confidence 011234567789999988765 67899 9999999999 6778764
No 215
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.90 E-value=1.9e-24 Score=211.07 Aligned_cols=171 Identities=25% Similarity=0.335 Sum_probs=132.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc---CCCCccceEEEEEe-----CCeEEEEEecCCCCCHHHHHHhCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL---HHQHIVTMLDFLWD-----ERYVYIILEYCDGGDLCSFIRSHE 73 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~~~~~~~~-----~~~~~lv~e~~~g~sL~~~l~~~~ 73 (477)
++|+.||+|.++...........+.+|+.+++.+ +||||+++++++.. ...++++|||++ ++|.+++....
T Consensus 23 ~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~ 101 (288)
T cd07863 23 HSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVP 101 (288)
T ss_pred CCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcC
Confidence 4788999999876543333334466788777766 69999999998764 346899999998 69999987643
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccc
Q psy6508 74 --KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151 (477)
Q Consensus 74 --~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE 151 (477)
.+++..++.++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+....... ......++..|+|||
T Consensus 102 ~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~-~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE 177 (288)
T cd07863 102 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG-QVKLADFGLARIYSCQM---ALTPVVVTLWYRAPE 177 (288)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-CEEECccCccccccCcc---cCCCccccccccCch
Confidence 489999999999999999999999999999999999997643 23445999875433211 112345678899999
Q ss_pred cCCCC---CcccccCcceEEEEEE--eeeccc
Q psy6508 152 IPSSK---TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 152 ~~~~~---~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
...+. .++|+ ||+|+++|++ +.+||.
T Consensus 178 ~~~~~~~~~~~Di-wslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 178 VLLQSTYATPVDM-WSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred HhhCCCCCCcchh-hhHHHHHHHHHhCCcCcC
Confidence 88655 77899 9999999998 556664
No 216
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.90 E-value=3.7e-24 Score=216.64 Aligned_cols=170 Identities=24% Similarity=0.359 Sum_probs=138.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC------CeEEEEEecCCCCCHHHHHHhCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE------RYVYIILEYCDGGDLCSFIRSHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------~~~~lv~e~~~g~sL~~~l~~~~~l 75 (477)
.+++.||||++............+.+|+.+++.++||||+++++++... ..+|+||||++ ++|.+++.. .+
T Consensus 47 ~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~ 123 (364)
T cd07875 47 ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM--EL 123 (364)
T ss_pred CCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHHh--cC
Confidence 4678899999987655555567788999999999999999999987543 35799999997 688888764 58
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
++..+..++.|++.||.|||++||+||||||+||+++.+. .+.++|||.+.....+. ...+..++..|+|||...+
T Consensus 124 ~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~ 199 (364)
T cd07875 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILG 199 (364)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC-cEEEEeCCCccccCCCC---cccCCcccCCcCCHHHHhC
Confidence 8999999999999999999999999999999999997653 34445999986543322 1234567889999999876
Q ss_pred C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|+++|+| +..||.+
T Consensus 200 ~~~~~~~Di-wSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 200 MGYKENVDI-WSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred CCCCchhhH-HhHHHHHHHHHhCCCCCCC
Confidence 5 67899 9999999999 6677764
No 217
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.90 E-value=1.3e-23 Score=202.72 Aligned_cols=176 Identities=23% Similarity=0.321 Sum_probs=141.1
Q ss_pred CCCcEEEEEEcccCCC---ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKV---SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+++.||+|.+..... .......+.+|+.++++++||||+++++++.+. +.+++++||+++++|.+++...+.++
T Consensus 25 ~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~ 104 (264)
T cd06653 25 DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALT 104 (264)
T ss_pred CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCC
Confidence 4688999998764321 234456789999999999999999999998754 56899999999999999998877899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccC-CeEEEeccccccccCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQG-NTKVICSVFEPREIPSS 155 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g-~t~v~~~~y~ppE~~~~ 155 (477)
+..+..++.|++.||.|||++|++|+||||+||+++.+. .+...|||.+...........+ ....++..|.|||...+
T Consensus 105 ~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 183 (264)
T cd06653 105 ENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG-NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISG 183 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-CEEECccccccccccccccCccccccCCcccccCHhhhcC
Confidence 999999999999999999999999999999999997653 3445699988754432111111 12346678999998876
Q ss_pred C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ |++|++++++ +..||..
T Consensus 184 ~~~~~~~Di-~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 184 EGYGRKADV-WSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred CCCCccccH-HHHHHHHHHHHhCCCCCCc
Confidence 5 67899 9999999999 6688864
No 218
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.90 E-value=3.3e-23 Score=202.05 Aligned_cols=169 Identities=18% Similarity=0.264 Sum_probs=134.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCC-CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHE-KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~-~l~~~ 78 (477)
.+++.||+|.++... .....+.+.+|+.+++.++||||+++++++... ...+++|||++|++|.+++.+.. .+++.
T Consensus 31 ~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~ 109 (284)
T cd05079 31 NTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLK 109 (284)
T ss_pred CccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHH
Confidence 367889999986543 344456799999999999999999999998765 57899999999999999997643 58999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCc-ccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSA-YIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~-~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+..++.|++.||+|||++|++||||||+||+++.+. .+.+.|||.+....... ......+..++..|+|||...+.
T Consensus 110 ~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~ 188 (284)
T cd05079 110 QQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH-QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSK 188 (284)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC-CEEECCCccccccccCccceeecCCCCCCccccCHHHhccCC
Confidence 9999999999999999999999999999999997653 34556999876443211 11111223344569999987654
Q ss_pred --CcccccCcceEEEEEEe
Q psy6508 157 --TSLEYQRSKGELYVEFK 173 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~~ 173 (477)
.++|+ ||+|+++|++.
T Consensus 189 ~~~~~Di-~slG~il~ell 206 (284)
T cd05079 189 FYIASDV-WSFGVTLYELL 206 (284)
T ss_pred CCccccc-hhhhhhhhhhh
Confidence 67899 99999999994
No 219
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.90 E-value=2.4e-24 Score=207.01 Aligned_cols=169 Identities=22% Similarity=0.349 Sum_probs=135.3
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQ 82 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~ 82 (477)
+..||+|.+...... .+.+.+|+.++++++||||+++++++......|++|||+++++|.+++... ..+++..+..
T Consensus 28 ~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~ 104 (256)
T cd05113 28 QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLE 104 (256)
T ss_pred CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHH
Confidence 456999998755432 356889999999999999999999999888999999999999999999764 3689999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Ccc
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSL 159 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~ 159 (477)
++.|++.||.|||++|++|+||||+||+++.+. ++.++|||............ .....++..|+|||...+. .++
T Consensus 105 ~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~-~~kl~d~g~~~~~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~ 182 (256)
T cd05113 105 MCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG-CVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLLYSKFSSKS 182 (256)
T ss_pred HHHHHHHHHHHHHhCCeeccccCcceEEEcCCC-CEEECCCccceecCCCceee-cCCCccChhhCCHHHHhcCcccchh
Confidence 999999999999999999999999999997643 44556999876443222211 1112234569999988654 678
Q ss_pred cccCcceEEEEEE---eeeccc
Q psy6508 160 EYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 160 Di~~s~G~il~e~---~~~Pf~ 178 (477)
|+ ||+|+++|++ +..||.
T Consensus 183 Di-~slG~~l~~l~~~g~~p~~ 203 (256)
T cd05113 183 DV-WAFGVLMWEVYSLGKMPYE 203 (256)
T ss_pred HH-HHHHHHHHHHhcCCCCCcC
Confidence 99 9999999998 446665
No 220
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.90 E-value=2.9e-24 Score=206.46 Aligned_cols=173 Identities=24% Similarity=0.329 Sum_probs=145.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.|++|++...... ...+.+.+|+..+++++||||+++++++...+..+++|||+++++|.+++.....+++..+.
T Consensus 24 ~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~ 102 (264)
T cd06623 24 PTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLA 102 (264)
T ss_pred CCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHH
Confidence 36899999998766432 45678999999999999999999999999999999999999999999999887889999999
Q ss_pred HHHHHHHHHHHHHHh-CCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 82 QFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
.++.|++.|+.|||+ +|++||||+|+||+++.+ .+++ .|||.+........ ...+..++..|.|||.....
T Consensus 103 ~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l--~df~~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~ 178 (264)
T cd06623 103 YIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKI--ADFGISKVLENTLD--QCNTFVGTVTYMSPERIQGESYS 178 (264)
T ss_pred HHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEE--ccCccceecccCCC--cccceeecccccCHhhhCCCCCC
Confidence 999999999999999 999999999999999764 4444 58988765432211 11345677889999987766
Q ss_pred CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.++|+ |++|+++|++ +..||...
T Consensus 179 ~~~Dv-~slG~il~~l~tg~~p~~~~ 203 (264)
T cd06623 179 YAADI-WSLGLTLLECALGKFPFLPP 203 (264)
T ss_pred chhhH-HHHHHHHHHHHhCCCCCccc
Confidence 57899 9999999999 66787654
No 221
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.90 E-value=2.9e-24 Score=206.11 Aligned_cols=171 Identities=22% Similarity=0.336 Sum_probs=136.0
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~ 81 (477)
++..+|+|.+...... .+.+.+|+.++++++||||+++++++...+..+++|||++|++|.+++... +.+++..+.
T Consensus 27 ~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~ 103 (256)
T cd05114 27 AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLL 103 (256)
T ss_pred cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHH
Confidence 4567999988654333 356889999999999999999999999999999999999999999999753 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.+. .+...|||.+.......... .....++..|+|||...+. .+
T Consensus 104 ~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~-~~kl~d~g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~ 181 (256)
T cd05114 104 SMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG-VVKVSDFGMTRYVLDDEYTS-SSGAKFPVKWSPPEVFNFSKYSSK 181 (256)
T ss_pred HHHHHHHHHHHHHHHCCccccccCcceEEEcCCC-eEEECCCCCccccCCCceec-cCCCCCchhhCChhhcccCccchh
Confidence 9999999999999999999999999999997653 34556999876433221111 1111233469999988654 67
Q ss_pred ccccCcceEEEEEE---eeecccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
+|+ ||+|+++|++ +..||..
T Consensus 182 ~Di-~s~G~~l~el~~~g~~p~~~ 204 (256)
T cd05114 182 SDV-WSFGVLMWEVFTEGKMPFEK 204 (256)
T ss_pred hhh-HHHHHHHHHHHcCCCCCCCC
Confidence 899 9999999998 4467653
No 222
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.90 E-value=4e-24 Score=208.25 Aligned_cols=174 Identities=21% Similarity=0.326 Sum_probs=141.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+|+.||+|++..........+.+.+|+.++++++|||++++++++......+++|||+++++|..++.....+++..+.
T Consensus 24 ~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~ 103 (286)
T cd07847 24 ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIK 103 (286)
T ss_pred CCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHH
Confidence 36889999998765433334456889999999999999999999999999999999999998888887776679999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK----T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~----~ 157 (477)
.++.|++.||.|||++|++||||||+||+++.++ .+.+.|||.+....+... ......++..|+|||...+. .
T Consensus 104 ~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~ 180 (286)
T cd07847 104 KIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG-QIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGP 180 (286)
T ss_pred HHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC-cEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCc
Confidence 9999999999999999999999999999998653 344569998865443221 11233456789999987543 5
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|++++++ +..||.+
T Consensus 181 ~~Di-~slG~i~~~l~~g~~p~~~ 203 (286)
T cd07847 181 PVDV-WAIGCVFAELLTGQPLWPG 203 (286)
T ss_pred hhhh-HHHHHHHHHHHhCCCCCCC
Confidence 7899 9999999999 6677763
No 223
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.90 E-value=8.9e-24 Score=206.61 Aligned_cols=174 Identities=20% Similarity=0.282 Sum_probs=137.2
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
.+..||+|.++... .......+.+|+.+++.++||||+++++++...+..|++|||+++|+|.+++.+.+
T Consensus 35 ~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 113 (288)
T cd05061 35 AETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 113 (288)
T ss_pred cceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCC
Confidence 35589999986543 23334568899999999999999999999998899999999999999999997532
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 74 -KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 74 -~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
..+...+..++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+...........+....++..|+|||.
T Consensus 114 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~-~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~ 192 (288)
T cd05061 114 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 192 (288)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCC-cEEECcCCccccccccccccccCCCcccccccCHHH
Confidence 345678899999999999999999999999999999998643 445569998765433332233333444567999998
Q ss_pred CCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
..+. .++|+ ||+|+++||+ +..||.+
T Consensus 193 ~~~~~~~~~~Dv-wslG~~l~el~~~~~~p~~~ 224 (288)
T cd05061 193 LKDGVFTTSSDM-WSFGVVLWEITSLAEQPYQG 224 (288)
T ss_pred hccCCCChHhHH-HHHHHHHHHHHhCCCCCCCC
Confidence 7654 67899 9999999998 3456653
No 224
>KOG0986|consensus
Probab=99.90 E-value=4.2e-25 Score=214.70 Aligned_cols=172 Identities=22% Similarity=0.328 Sum_probs=148.6
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~ 78 (477)
.||+.||+|.+.++.+.. .......+|..+|++++.|+||.+--+|++.+.+|+|+..|+||+|.-.|.+.+ .+++.
T Consensus 208 aTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ 287 (591)
T KOG0986|consen 208 ATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQ 287 (591)
T ss_pred cchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchH
Confidence 578999999988776532 234457899999999999999999889999999999999999999999887765 79999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.++.++.+|+.||++||+.+||+||+||+|||+|+ +.+|+. |+|++....+.... ...+||..|||||++...
T Consensus 288 ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRIS--DLGLAvei~~g~~~---~~rvGT~GYMAPEvl~ne~ 362 (591)
T KOG0986|consen 288 RARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRIS--DLGLAVEIPEGKPI---RGRVGTVGYMAPEVLQNEV 362 (591)
T ss_pred HHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEee--ccceEEecCCCCcc---ccccCcccccCHHHHcCCc
Confidence 99999999999999999999999999999999986 677877 99998754432221 234899999999999877
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.+.|+ |++||++||| |..||..
T Consensus 363 Y~~s~Dw-f~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 363 YDFSPDW-FSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred ccCCccH-HHHHhHHHHHHcccCchhh
Confidence 78899 9999999999 8899975
No 225
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.90 E-value=6.9e-24 Score=219.74 Aligned_cols=160 Identities=21% Similarity=0.239 Sum_probs=131.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
++++.||||.... ..+.+|+.+|++++||||+++++++..++..+++||++. ++|.+++... ..+++..+
T Consensus 192 ~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~ 262 (461)
T PHA03211 192 DYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQV 262 (461)
T ss_pred CCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHH
Confidence 3577899996321 235689999999999999999999999999999999996 7999988764 46999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
+.|+.|++.||.|||++||+||||||+|||++.+. .+.++|||++....+...........++..|++||+..+. .
T Consensus 263 ~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~-~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~ 341 (461)
T PHA03211 263 TAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE-DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTP 341 (461)
T ss_pred HHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC-CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCc
Confidence 99999999999999999999999999999997642 3344599998765443222222234578899999998766 6
Q ss_pred cccccCcceEEEEEE
Q psy6508 158 SLEYQRSKGELYVEF 172 (477)
Q Consensus 158 ~~Di~~s~G~il~e~ 172 (477)
++|+ ||+|+++||+
T Consensus 342 ~sDv-wSlGviL~El 355 (461)
T PHA03211 342 SVDI-WSAGLVIFEA 355 (461)
T ss_pred hHHH-HHHHHHHHHH
Confidence 7899 9999999998
No 226
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.90 E-value=2.7e-24 Score=211.17 Aligned_cols=173 Identities=24% Similarity=0.303 Sum_probs=135.8
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
++..||+|++.... .....+.+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++....
T Consensus 45 ~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (296)
T cd05095 45 QPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKAD 123 (296)
T ss_pred ceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCccccccccc
Confidence 34579999986543 34445679999999999999999999999999999999999999999999997642
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccc
Q psy6508 74 --KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151 (477)
Q Consensus 74 --~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE 151 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++.+. ++.+.|||.+.............+...+..|++||
T Consensus 124 ~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe 202 (296)
T cd05095 124 VVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNY-TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWE 202 (296)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCC-CEEeccCcccccccCCcceeccCcCcCccccCCHH
Confidence 366778999999999999999999999999999999997643 44556999876543322222222233345689999
Q ss_pred cCCCC---CcccccCcceEEEEEE----eeeccc
Q psy6508 152 IPSSK---TSLEYQRSKGELYVEF----KFAPFA 178 (477)
Q Consensus 152 ~~~~~---~~~Di~~s~G~il~e~----~~~Pf~ 178 (477)
...+. .++|+ ||+|+++||+ +..||.
T Consensus 203 ~~~~~~~~~~~Di-wSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 203 SILLGKFTTASDV-WAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred HHhcCCccchhhh-hHHHHHHHHHHHhCCCCCcc
Confidence 75544 67899 9999999998 335664
No 227
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.90 E-value=9.2e-25 Score=214.22 Aligned_cols=171 Identities=21% Similarity=0.371 Sum_probs=141.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||||.+.... ....+.+.+|+.+++.++||||+++++.+...+..|++|||+++++|.+++.. +.+++..+.
T Consensus 45 ~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~ 121 (292)
T cd06658 45 HTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIA 121 (292)
T ss_pred CCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHH
Confidence 468899999986542 33456789999999999999999999999999999999999999999998865 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.+. ++.+.|||.+...... .....+..++..|+|||...+. .+
T Consensus 122 ~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~-~~kL~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~ 198 (292)
T cd06658 122 TVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG-RIKLSDFGFCAQVSKE--VPKRKSLVGTPYWMAPEVISRLPYGTE 198 (292)
T ss_pred HHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-CEEEccCcchhhcccc--cccCceeecCccccCHHHHccCCCCch
Confidence 9999999999999999999999999999997642 3445599987543321 1223456678889999987654 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ ||+|+++||+ +..||..
T Consensus 199 ~Dv-~slGvil~el~~g~~p~~~ 220 (292)
T cd06658 199 VDI-WSLGIMVIEMIDGEPPYFN 220 (292)
T ss_pred hhH-HHHHHHHHHHHhCCCCCCC
Confidence 899 9999999999 6677764
No 228
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.90 E-value=1.9e-24 Score=211.45 Aligned_cols=173 Identities=23% Similarity=0.307 Sum_probs=135.5
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-----------
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH----------- 72 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----------- 72 (477)
.+.+++|.+.... .....+++.+|+.+++.++||||+++++.+..++..++++||+.+++|.+++...
T Consensus 30 ~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 108 (290)
T cd05045 30 YTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSD 108 (290)
T ss_pred ceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccc
Confidence 3568899886543 3344567999999999999999999999999999999999999999999998642
Q ss_pred -------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCC
Q psy6508 73 -------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGN 139 (477)
Q Consensus 73 -------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~ 139 (477)
..+++..+..++.|++.||.|||++|++||||||+||+++++. .+.++|||.+.............
T Consensus 109 ~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~ 187 (290)
T cd05045 109 GNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGR-KMKISDFGLSRDVYEEDSYVKRS 187 (290)
T ss_pred cccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCC-cEEeccccccccccCccchhccc
Confidence 2477889999999999999999999999999999999997653 34446999876433222111122
Q ss_pred eEEEeccccccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 140 TKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 140 t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
...++..|+|||...+. .++|+ ||+|++++++ +..||.+
T Consensus 188 ~~~~~~~y~apE~~~~~~~~~~~Di-~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 188 KGRIPVKWMAIESLFDHIYTTQSDV-WSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred CCCCCccccCHHHHccCCcchHhHH-HHHHHHHHHHHhcCCCCCCC
Confidence 22334579999986554 67899 9999999997 4456653
No 229
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.90 E-value=1.8e-24 Score=212.60 Aligned_cols=171 Identities=26% Similarity=0.376 Sum_probs=140.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+|+.|++|.+..... ...+.+.+|+.+++.++||||+++++.+...+.+|+|+||+++++|..++.. ..+++..+.
T Consensus 42 ~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~ 118 (296)
T cd06655 42 ATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIA 118 (296)
T ss_pred CCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh-cCCCHHHHH
Confidence 4688999999875532 2346788999999999999999999999999999999999999999999876 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.+. ++.+.|||.+........ ......++..|+|||...+. .+
T Consensus 119 ~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~-~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~ 195 (296)
T cd06655 119 AVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG-SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPK 195 (296)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-CEEEccCccchhcccccc--cCCCcCCCccccCcchhcCCCCCch
Confidence 9999999999999999999999999999997643 344459998754332111 11234566789999987665 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|+++|++ +..||..
T Consensus 196 ~Dv-~slGvil~~lltg~~pf~~ 217 (296)
T cd06655 196 VDI-WSLGIMAIEMVEGEPPYLN 217 (296)
T ss_pred hhH-HHHHHHHHHHHhCCCCCCC
Confidence 899 9999999999 6677764
No 230
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.90 E-value=2e-24 Score=209.31 Aligned_cols=171 Identities=27% Similarity=0.406 Sum_probs=142.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.+.... .......+.+|+.+++.++||||+++++.+..+...|+++||+++++|.+++... ++++..+.
T Consensus 24 ~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~ 101 (274)
T cd06609 24 RTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIA 101 (274)
T ss_pred CCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHH
Confidence 468899999987654 2344567889999999999999999999999999999999999999999999875 79999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||.|||++|++||||+|+||+++++ .+++ .|||.+....... .......++..|+|||...+. .
T Consensus 102 ~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l--~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~ 177 (274)
T cd06609 102 FILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKL--ADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDE 177 (274)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEE--cccccceeecccc--cccccccCCccccChhhhccCCCCc
Confidence 999999999999999999999999999999864 4444 5999876544321 112234566789999988765 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ |++|+++|++ +..||..
T Consensus 178 ~sDv-~slG~il~~l~tg~~p~~~ 200 (274)
T cd06609 178 KADI-WSLGITAIELAKGEPPLSD 200 (274)
T ss_pred hhhH-HHHHHHHHHHHhCCCCccc
Confidence 7899 9999999999 6677764
No 231
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.90 E-value=1.8e-23 Score=200.83 Aligned_cols=172 Identities=24% Similarity=0.348 Sum_probs=141.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
.+++.+++|.+..... ...+.+.+|+.++++++||||+++++.+..++.+|++|||+++++|.+++... ..+++..+
T Consensus 26 ~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~ 103 (262)
T cd06613 26 ATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQI 103 (262)
T ss_pred CCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHH
Confidence 3578899999876542 24578899999999999999999999999999999999999999999999876 68999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.|++.||.|||++|++|+||+|+||+++.+. .+.++|||.+....... .......++..|+|||...+.
T Consensus 104 ~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~-~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~ 180 (262)
T cd06613 104 AYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG-DVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGG 180 (262)
T ss_pred HHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC-CEEECccccchhhhhhh--hccccccCCccccCchhhcccccCC
Confidence 99999999999999999999999999999998643 34456999876433211 111234566789999987532
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++++| +..||..
T Consensus 181 ~~~~~Di-~slG~~l~~~~tg~~p~~~ 206 (262)
T cd06613 181 YDGKCDI-WALGITAIELAELQPPMFD 206 (262)
T ss_pred cCchhhh-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 7778764
No 232
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.90 E-value=3.1e-24 Score=207.46 Aligned_cols=171 Identities=17% Similarity=0.262 Sum_probs=132.5
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-----CCCHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-----KLSEF 78 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-----~l~~~ 78 (477)
...+++|.+.... .......+.+|+.+++.++||||+++++.+......|+||||+++|+|.+++.... ..++.
T Consensus 22 ~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~ 100 (269)
T cd05042 22 KARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKD 100 (269)
T ss_pred CeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHH
Confidence 4568888875432 33445678899999999999999999999999999999999999999999997643 24677
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS-- 155 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~-- 155 (477)
.+..++.|++.||+|||++||+||||||+||+++.+ .+++ .|||.+.......+........++..|+|||....
T Consensus 101 ~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl--~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 178 (269)
T cd05042 101 VLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKI--GDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRG 178 (269)
T ss_pred HHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEE--eccccccccccchheeccCCCCCcccccCHHHHhhcc
Confidence 889999999999999999999999999999999764 4444 59998754322222111222334556999997532
Q ss_pred --------CCcccccCcceEEEEEE---eeeccc
Q psy6508 156 --------KTSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 156 --------~~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
..++|+ ||+|+++||+ +..||.
T Consensus 179 ~~~~~~~~~~~~Di-wslG~~l~el~~~~~~p~~ 211 (269)
T cd05042 179 QDLLPKDQTKKSNI-WSLGVTMWELFTAADQPYP 211 (269)
T ss_pred ccccccccchhhHH-HHHHHHHHHHHhCCCCCCC
Confidence 157899 9999999998 345554
No 233
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.90 E-value=3.4e-24 Score=209.87 Aligned_cols=172 Identities=24% Similarity=0.357 Sum_probs=139.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~~ 80 (477)
.+++.|++|.+... .....+.+.+|+.+++.++||||+++++.+..++.+|+||||++|++|..++.+ ...+++..+
T Consensus 35 ~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~ 112 (292)
T cd06644 35 ETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI 112 (292)
T ss_pred CCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHH
Confidence 46889999998654 345567789999999999999999999999999999999999999999988765 346899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.|++.||.|||++|++||||||+||+++.++ .+.++|||.+....... .......++..|+|||...+.
T Consensus 113 ~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~-~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ 189 (292)
T cd06644 113 QVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG-DIKLADFGVSAKNVKTL--QRRDSFIGTPYWMAPEVVMCETMKD 189 (292)
T ss_pred HHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC-CEEEccCccceeccccc--cccceecCCccccCceeeccccccC
Confidence 99999999999999999999999999999997542 34445999875432221 112344566789999987421
Q ss_pred ----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||..
T Consensus 190 ~~~~~~~Dv-~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 190 TPYDYKADI-WSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred CCCCchhhh-HhHHHHHHHHhcCCCCCcc
Confidence 46899 9999999998 6677754
No 234
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.90 E-value=4e-24 Score=209.50 Aligned_cols=174 Identities=24% Similarity=0.342 Sum_probs=139.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
.+|+.||+|.+..........+.+.+|+.++++++||||+++++++...+..|+||||++ ++|.+++.... .+++..
T Consensus 25 ~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~ 103 (294)
T PLN00009 25 VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRL 103 (294)
T ss_pred CCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHH
Confidence 468899999987665444445678899999999999999999999999999999999997 68888886543 357888
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.||+.||+|||++|++||||+|+||+++.++.++..+|||.+...... ........++..|+|||...+.
T Consensus 104 ~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~ 181 (294)
T PLN00009 104 IKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP--VRTFTHEVVTLWYRAPEILLGSRHY 181 (294)
T ss_pred HHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC--ccccccCceeecccCHHHHhCCCCC
Confidence 99999999999999999999999999999999865445556699987543221 1112334567889999987543
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||..
T Consensus 182 ~~~~Dv-~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 182 STPVDI-WSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred CcHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 57899 9999999999 6677753
No 235
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.90 E-value=1e-23 Score=201.42 Aligned_cols=174 Identities=24% Similarity=0.352 Sum_probs=139.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
++++.||+|.++... .......+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++... ..+++..+
T Consensus 17 ~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 95 (250)
T cd05085 17 KDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQL 95 (250)
T ss_pred cCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHH
Confidence 357789999986553 3344457889999999999999999999999999999999999999999998754 36889999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|+|++|++||||||+||+++.+. .+...|||.+........ .......++..|+|||...+. .
T Consensus 96 ~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~-~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~ 173 (250)
T cd05085 96 VKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN-VLKISDFGMSRQEDDGIY-SSSGLKQIPIKWTAPEALNYGRYSS 173 (250)
T ss_pred HHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC-eEEECCCccceecccccc-ccCCCCCCcccccCHHHhccCCCCc
Confidence 99999999999999999999999999999997653 344569998765433222 111122334569999987655 5
Q ss_pred cccccCcceEEEEEE---eeecccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
++|+ ||+|+++|++ +..||.+
T Consensus 174 ~~Di-~slG~ll~~~~~~g~~p~~~ 197 (250)
T cd05085 174 ESDV-WSYGILLWETFSLGVCPYPG 197 (250)
T ss_pred hhHH-HHHHHHHHHHhcCCCCCCCC
Confidence 7899 9999999987 5567754
No 236
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=5.5e-24 Score=210.09 Aligned_cols=173 Identities=20% Similarity=0.356 Sum_probs=136.6
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
+..||+|.++... ......++.+|+.+++.+ +||||+++++++...+..|++|||+++++|.+++...+
T Consensus 50 ~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 128 (307)
T cd05098 50 VTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYN 128 (307)
T ss_pred cceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccc
Confidence 3579999987543 334456788999999999 79999999999999999999999999999999997642
Q ss_pred -------CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecc
Q psy6508 74 -------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV 146 (477)
Q Consensus 74 -------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~ 146 (477)
.+++..++.++.|++.||+|||++|++||||||+||+++.+. .+.++|||.+................++..
T Consensus 129 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~-~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~ 207 (307)
T cd05098 129 PTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVK 207 (307)
T ss_pred cccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCC-cEEECCCcccccccccchhhccccCCCccc
Confidence 478899999999999999999999999999999999997653 344569998764432221111112223457
Q ss_pred ccccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 147 FEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 147 y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|+|||...+. .++|+ ||+|+++|++ +..||.+
T Consensus 208 y~aPE~~~~~~~~~~~Dv-wslG~~l~el~~~g~~p~~~ 245 (307)
T cd05098 208 WMAPEALFDRIYTHQSDV-WSFGVLLWEIFTLGGSPYPG 245 (307)
T ss_pred eeChHHhccCCCCcHHHH-HHHHHHHHHHHcCCCCCCCc
Confidence 9999987655 67899 9999999998 4466653
No 237
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.90 E-value=1.1e-23 Score=203.16 Aligned_cols=166 Identities=17% Similarity=0.211 Sum_probs=132.6
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQF 83 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i 83 (477)
..|++|.+.... ......+.+|+.+++.++||||+++++++..+...+++|||+++++|..++... ..+++..+..+
T Consensus 33 ~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i 110 (262)
T cd05077 33 IKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKV 110 (262)
T ss_pred eeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHH
Confidence 468899876542 334457889999999999999999999999988999999999999999998753 46899999999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeeccCcc------eeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKNNTL------KLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~------rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
+.|++.||.|||++||+||||||+|||++.+.. .+...|||...... ......++..|+|||.....
T Consensus 111 ~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~------~~~~~~~~~~y~aPE~~~~~~ 184 (262)
T cd05077 111 AKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVL------SRQECVERIPWIAPECVEDSK 184 (262)
T ss_pred HHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCcccc------CcccccccccccChhhhcCCC
Confidence 999999999999999999999999999965331 24456888764321 11234456679999987532
Q ss_pred ---CcccccCcceEEEEEE---eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ ||+|+++||+ +..||..
T Consensus 185 ~~~~~~Di-wslG~~l~el~~~~~~p~~~ 212 (262)
T cd05077 185 NLSIAADK-WSFGTTLWEICYNGEIPLKD 212 (262)
T ss_pred CCCchhHH-HHHHHHHHHHHhCCCCCCCC
Confidence 57899 9999999997 4456653
No 238
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.90 E-value=8.5e-24 Score=207.86 Aligned_cols=172 Identities=24% Similarity=0.345 Sum_probs=141.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++++.||+|.+...... ..+.+.+|+.+++.++||||+++++.+..++..|+||||++|++|.+++.+ ..+++..+.
T Consensus 42 ~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~ 118 (297)
T cd06656 42 ATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIA 118 (297)
T ss_pred CCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh-CCCCHHHHH
Confidence 47899999998755432 345688999999999999999999999999999999999999999999876 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||+.|++||||||+||+++.+. .+...|||.+........ ......+++.|.|||...+. .+
T Consensus 119 ~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~-~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~ 195 (297)
T cd06656 119 AVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPK 195 (297)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-CEEECcCccceEccCCcc--CcCcccCCccccCHHHHcCCCCCcH
Confidence 9999999999999999999999999999997643 344459998764332211 11234567789999988665 67
Q ss_pred ccccCcceEEEEEE--eeeccccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
+|+ |++|+++|++ +..||.+.
T Consensus 196 ~Di-~slGvil~~l~tg~~pf~~~ 218 (297)
T cd06656 196 VDI-WSLGIMAIEMVEGEPPYLNE 218 (297)
T ss_pred HHH-HHHHHHHHHHHhCCCCCCCC
Confidence 899 9999999999 77888653
No 239
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.90 E-value=1.3e-24 Score=208.30 Aligned_cols=174 Identities=32% Similarity=0.505 Sum_probs=143.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|++..............+|+.++++++||||+++++++......+++||++++++|.+++...+.+++..+.
T Consensus 22 ~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~ 101 (260)
T PF00069_consen 22 KNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEIL 101 (260)
T ss_dssp TTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHH
T ss_pred CCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46778999999887655444445567999999999999999999999999999999999988999999976789999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCC-CC---C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPS-SK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~-~~---~ 157 (477)
.++.|++.||.+||++|++|+||||+||+++.+ ..+.++|||.+...... ........++..|.|||... +. .
T Consensus 102 ~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~-~~~~l~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~ 178 (260)
T PF00069_consen 102 KIAYQILEALAYLHSKGIVHRDIKPENILLDEN-GEVKLIDFGSSVKLSEN--NENFNPFVGTPEYMAPEVLQQGKKYTR 178 (260)
T ss_dssp HHHHHHHHHHHHHHHTTEEESSBSGGGEEESTT-SEEEESSGTTTEESTST--TSEBSSSSSSGGGSCHHHHTTTSSBST
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999843 23345599987642111 11223445677899999987 33 7
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ |++|+++++| +..||..
T Consensus 179 ~~Di-~slG~il~~l~~~~~p~~~ 201 (260)
T PF00069_consen 179 KSDI-WSLGIILYELLTGKLPFEE 201 (260)
T ss_dssp HHHH-HHHHHHHHHHHHSSSSSTT
T ss_pred cccc-ccccccccccccccccccc
Confidence 8999 9999999999 5567764
No 240
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.90 E-value=1.6e-23 Score=200.07 Aligned_cols=177 Identities=24% Similarity=0.350 Sum_probs=147.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
++++.|++|++..........+.+.+|+.++++++||||+++++.+... ...++++||+++++|.+++.....+++..
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 102 (260)
T cd06606 23 DTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPV 102 (260)
T ss_pred CCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHH
Confidence 4688999999987765555677899999999999999999999999988 89999999999999999998877899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++|+||+|+||+++.+. ++.++|||.+................++..|.|||...+.
T Consensus 103 ~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~ 181 (260)
T cd06606 103 IRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG-VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYG 181 (260)
T ss_pred HHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC-CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCC
Confidence 999999999999999999999999999999998742 4445699987665543321112234566789999987655
Q ss_pred CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.++|+ |++|++++++ +..||...
T Consensus 182 ~~~Dv-~slG~il~~l~~g~~p~~~~ 206 (260)
T cd06606 182 RAADI-WSLGCTVIEMATGKPPWSEL 206 (260)
T ss_pred chhhH-HHHHHHHHHHHhCCCCCCCC
Confidence 67899 9999999998 67787653
No 241
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.90 E-value=1.4e-23 Score=202.97 Aligned_cols=172 Identities=23% Similarity=0.282 Sum_probs=135.5
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQF 83 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i 83 (477)
..||||.+.... .....+.|.+|+.+++.++||||+++++++..+...+++|||+++++|.+++... +.+++..++.+
T Consensus 33 ~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i 111 (269)
T cd05065 33 IFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGM 111 (269)
T ss_pred eeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHH
Confidence 469999986543 4455678999999999999999999999999999999999999999999999764 46899999999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc-ccCCeE--EEeccccccccCCCC---C
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI-EQGNTK--VICSVFEPREIPSSK---T 157 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~-~~g~t~--v~~~~y~ppE~~~~~---~ 157 (477)
+.|++.||.|||++|++||||||+||+++.+. ++...|||........... ...... .....|+|||...+. .
T Consensus 112 ~~~l~~al~~lH~~g~~H~dl~p~nili~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~ 190 (269)
T cd05065 112 LRGIAAGMKYLSEMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTS 190 (269)
T ss_pred HHHHHHHHHHHHHCCEeecccChheEEEcCCC-cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccc
Confidence 99999999999999999999999999997653 4445599987543322110 000000 112369999988655 6
Q ss_pred cccccCcceEEEEEE---eeecccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
++|+ |++|+++||+ +..||..
T Consensus 191 ~~Dv-wslG~~l~e~l~~g~~p~~~ 214 (269)
T cd05065 191 ASDV-WSYGIVMWEVMSYGERPYWD 214 (269)
T ss_pred hhhh-hhhHHHHHHHhcCCCCCCCC
Confidence 7899 9999999995 5566653
No 242
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.90 E-value=1.7e-23 Score=202.14 Aligned_cols=173 Identities=24% Similarity=0.316 Sum_probs=139.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCC--CHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKL--SEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l--~~~ 78 (477)
+++..||+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++++||+++++|.+++... ..+ ++.
T Consensus 31 ~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 108 (268)
T cd06624 31 STQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQ 108 (268)
T ss_pred CCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHH
Confidence 467789999886543 334567899999999999999999999999999999999999999999999764 345 888
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++||+||||||+||+++.+.-++.++|||.+....+... ......++..|.|||...+.
T Consensus 109 ~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~ 186 (268)
T cd06624 109 TIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPR 186 (268)
T ss_pred HHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC--ccccCCCCccccChhhhccccc
Confidence 89999999999999999999999999999999976433455569998754432211 11123456789999987542
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||..
T Consensus 187 ~~~~~~Dv-~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 187 GYGAPADI-WSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred cCCchhhh-HHHHHHHHHHHhCCCCCcc
Confidence 57899 9999999999 6778764
No 243
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.90 E-value=9.8e-24 Score=205.17 Aligned_cols=170 Identities=16% Similarity=0.208 Sum_probs=133.7
Q ss_pred EEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHH
Q psy6508 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFV 84 (477)
Q Consensus 6 ~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i~ 84 (477)
.||+|+++... .....+.+.+|+.+++.++||||+++++++.. ...++++||+++|+|.+++..+ +.+++..+..++
T Consensus 38 ~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~ 115 (279)
T cd05109 38 PVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWC 115 (279)
T ss_pred EEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHH
Confidence 58999986543 34455678999999999999999999999875 4578999999999999999764 468999999999
Q ss_pred HHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Ccccc
Q psy6508 85 RQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEY 161 (477)
Q Consensus 85 ~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di 161 (477)
.|++.||.|||++|++||||||+||+++++. ++.++|||.+.................+..|+|||...+. .++|+
T Consensus 116 ~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~-~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di 194 (279)
T cd05109 116 VQIAKGMSYLEEVRLVHRDLAARNVLVKSPN-HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDV 194 (279)
T ss_pred HHHHHHHHHHHHCCeeccccccceEEEcCCC-cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHH
Confidence 9999999999999999999999999997643 3455699988654422211111122334569999988655 67899
Q ss_pred cCcceEEEEEE---eeecccc
Q psy6508 162 QRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 162 ~~s~G~il~e~---~~~Pf~~ 179 (477)
||+|+++||+ +..||..
T Consensus 195 -~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 195 -WSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred -HHHHHHHHHHHcCCCCCCCC
Confidence 9999999996 4566653
No 244
>KOG1152|consensus
Probab=99.90 E-value=9.4e-24 Score=210.54 Aligned_cols=170 Identities=26% Similarity=0.455 Sum_probs=143.8
Q ss_pred CCCcEEEEEEcccCCCChhHH------HHHHHHHHHHHhcC---CCCccceEEEEEeCCeEEEEEec-CCCCCHHHHHHh
Q psy6508 2 EQHTEVAIKCIDKTKVSENRF------DSIVNEIKALKLLH---HQHIVTMLDFLWDERYVYIILEY-CDGGDLCSFIRS 71 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~------~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~lv~e~-~~g~sL~~~l~~ 71 (477)
++...|+||.+.++.+-.+.+ -.+-.|++||..|+ |+||+|++++|++++++||+||. -+|-+|.+++..
T Consensus 584 ~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~ 663 (772)
T KOG1152|consen 584 ENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEF 663 (772)
T ss_pred ccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhc
Confidence 567889999998876533222 23668999999997 99999999999999999999995 467899999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEecccccc
Q psy6508 72 HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150 (477)
Q Consensus 72 ~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~pp 150 (477)
++++++.++..|++|++.|+++||++||+|||||-+|+.++.+ ..|++ |||.+...+...+ .+.+||-.|.||
T Consensus 664 kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~kli--dfgsaa~~ksgpf----d~f~gtv~~aap 737 (772)
T KOG1152|consen 664 KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLI--DFGSAAYTKSGPF----DVFVGTVDYAAP 737 (772)
T ss_pred cCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEe--eccchhhhcCCCc----ceeeeeccccch
Confidence 9999999999999999999999999999999999999999875 45555 9997754443222 478999999999
Q ss_pred ccCCCC----CcccccCcceEEEEEEee--eccc
Q psy6508 151 EIPSSK----TSLEYQRSKGELYVEFKF--APFA 178 (477)
Q Consensus 151 E~~~~~----~~~Di~~s~G~il~e~~~--~Pf~ 178 (477)
|++.|. ...|| |++|+++|.+.| .||.
T Consensus 738 evl~g~~y~gk~qdi-walgillytivykenpyy 770 (772)
T KOG1152|consen 738 EVLGGEKYLGKPQDI-WALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhCCCccCCCcchh-hhhhheeeEEEeccCCCc
Confidence 999887 56799 999999999954 5554
No 245
>KOG0666|consensus
Probab=99.90 E-value=8.7e-25 Score=203.51 Aligned_cols=166 Identities=21% Similarity=0.355 Sum_probs=139.0
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe-CCeEEEEEecCCCCCHHHHHHhC-----CCCCHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD-ERYVYIILEYCDGGDLCSFIRSH-----EKLSEF 78 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~lv~e~~~g~sL~~~l~~~-----~~l~~~ 78 (477)
+.+|||.++.+...........+|+.+++.++|||++.+..+|.. +..+|+++||.+ .+|.+.++-+ +.+|..
T Consensus 54 k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~ 132 (438)
T KOG0666|consen 54 KEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRS 132 (438)
T ss_pred hhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhh-hhHHHHHHHhccchhccCCHH
Confidence 479999998774433334556799999999999999999998876 789999999998 8999999643 359999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC---cceeecccccceecccCCc-ccccCCeEEEeccccccccCC
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN---TLKLAGLKQGVSEKAKGSA-YIEQGNTKVICSVFEPREIPS 154 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~---~~rl~~~dfG~~~~~~gs~-~~~~g~t~v~~~~y~ppE~~~ 154 (477)
.++.|+.||+.|+.|||++-|+||||||.|||+..+ .-++.+.|+|+++.....- .+-.++..|.|.||.+||.+.
T Consensus 133 mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLL 212 (438)
T KOG0666|consen 133 MVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLL 212 (438)
T ss_pred HHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhc
Confidence 999999999999999999999999999999999543 3466667999987544332 223456789999999999998
Q ss_pred CC----CcccccCcceEEEEEE
Q psy6508 155 SK----TSLEYQRSKGELYVEF 172 (477)
Q Consensus 155 ~~----~~~Di~~s~G~il~e~ 172 (477)
|. .++|+ |+.|||+.|+
T Consensus 213 Ga~hYT~AiDv-WAiGCIfaEl 233 (438)
T KOG0666|consen 213 GARHYTKAIDV-WAIGCIFAEL 233 (438)
T ss_pred ccccccchhhh-HHHHHHHHHH
Confidence 87 78899 9999999999
No 246
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.90 E-value=1.1e-23 Score=208.98 Aligned_cols=171 Identities=18% Similarity=0.233 Sum_probs=133.2
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQF 83 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~~i 83 (477)
..||+|.++... .....+++.+|+.+++.++||||+++++++... ..++++||+++|+|.+++..+. .+++..+..+
T Consensus 37 ~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~ 114 (316)
T cd05108 37 IPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 114 (316)
T ss_pred eeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHH
Confidence 348999986442 344556799999999999999999999998764 5789999999999999998743 6889999999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cccc
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLE 160 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~D 160 (477)
+.|++.||+|||++||+||||||+||+++.+. .+.++|||.+.................+..|++||...+. .++|
T Consensus 115 ~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D 193 (316)
T cd05108 115 CVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSD 193 (316)
T ss_pred HHHHHHHHHHHHhcCeeccccchhheEecCCC-cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhh
Confidence 99999999999999999999999999997643 3444599988654321111111112234569999987665 6789
Q ss_pred ccCcceEEEEEE---eeecccc
Q psy6508 161 YQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 161 i~~s~G~il~e~---~~~Pf~~ 179 (477)
+ ||+|+++||+ +..||.+
T Consensus 194 i-~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 194 V-WSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred h-HHHHHHHHHHHcCCCCCCCC
Confidence 9 9999999996 4566653
No 247
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.90 E-value=1e-23 Score=205.68 Aligned_cols=171 Identities=27% Similarity=0.368 Sum_probs=140.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC---CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---~~l~~~ 78 (477)
.+|+.||+|.++... .......+.+|+.++++++||||+++++.+...+..|+||||++|++|.+++... ..+++.
T Consensus 24 ~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~ 102 (286)
T cd06622 24 PTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPED 102 (286)
T ss_pred CCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHH
Confidence 478999999986543 3445578999999999999999999999999999999999999999999998763 368999
Q ss_pred HHHHHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+..++.|++.||.|||+ .|++||||||+||+++.+. ++.++|||.+...... ...+..++..|.|||...+.
T Consensus 103 ~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~ 177 (286)
T cd06622 103 VLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG-QVKLCDFGVSGNLVAS----LAKTNIGCQSYMAPERIKSGG 177 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC-CEEEeecCCcccccCC----ccccCCCccCccCcchhcCCC
Confidence 999999999999999997 5999999999999998742 4455699987543221 12334566789999987542
Q ss_pred --------CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --------TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --------~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 178 ~~~~~~~~~~~Di-wslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 178 PNQNPTYTVQSDV-WSLGLSILEMALGRYPYPP 209 (286)
T ss_pred CCccCCCCcccch-HhHHHHHHHHHhCCCCCCC
Confidence 46899 9999999999 6677753
No 248
>KOG1095|consensus
Probab=99.90 E-value=1.6e-24 Score=233.90 Aligned_cols=172 Identities=23% Similarity=0.368 Sum_probs=145.6
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-------CCCH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-------KLSE 77 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-------~l~~ 77 (477)
..||||.+++.. +.....+|.+|..+|+.++||||++++|++.+....+|++|||+||+|..+|++.+ .+..
T Consensus 723 ~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~ 801 (1025)
T KOG1095|consen 723 IQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSM 801 (1025)
T ss_pred eEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCH
Confidence 359999986543 45667889999999999999999999999999999999999999999999998752 4889
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+...++.||++|++||+++++|||||..+|+|++.. ..+++.|||+++......|+..+.....-..|||||.+...
T Consensus 802 ~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~-r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~i 880 (1025)
T KOG1095|consen 802 RDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER-RVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGI 880 (1025)
T ss_pred HHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc-CcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcc
Confidence 9999999999999999999999999999999999876 34445699999865555555544432333459999999865
Q ss_pred --CcccccCcceEEEEEE---eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ ||+|+++||+ |..||.+
T Consensus 881 FtskSDv-WsFGVllWEifslG~~PY~~ 907 (1025)
T KOG1095|consen 881 FTSKSDV-WSFGVLLWEIFSLGATPYPS 907 (1025)
T ss_pred cccccch-hhhHHHHHHHHhCCCCCCCC
Confidence 78999 9999999998 7788874
No 249
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=2.3e-23 Score=208.31 Aligned_cols=172 Identities=18% Similarity=0.356 Sum_probs=135.8
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC----------
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE---------- 73 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------- 73 (477)
..||+|.++... .....+.+.+|+.+++++ +||||+++++++..++..++++||+++++|.+++.+..
T Consensus 45 ~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~ 123 (334)
T cd05100 45 VTVAVKMLKDDA-TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDT 123 (334)
T ss_pred eeEEEEEccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCccccccccc
Confidence 468999886442 344567899999999999 89999999999999999999999999999999997532
Q ss_pred ------CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccc
Q psy6508 74 ------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVF 147 (477)
Q Consensus 74 ------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y 147 (477)
.++...+..++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+................++..|
T Consensus 124 ~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y 202 (334)
T cd05100 124 CKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN-VMKIADFGLARDVHNIDYYKKTTNGRLPVKW 202 (334)
T ss_pred ccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC-cEEECCcccceecccccccccccCCCcCceE
Confidence 377888999999999999999999999999999999997643 3444599987654432221112222334569
Q ss_pred cccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 148 EPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 148 ~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
+|||...+. .++|+ |++|+++||+ +..||.+
T Consensus 203 ~aPE~~~~~~~~~~~Di-~slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 203 MAPEALFDRVYTHQSDV-WSFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred cCHHHhccCCcCchhhh-HHHHHHHHHHHhcCCCCCCC
Confidence 999988665 67899 9999999997 4466653
No 250
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.90 E-value=1.1e-23 Score=203.85 Aligned_cols=176 Identities=24% Similarity=0.343 Sum_probs=139.7
Q ss_pred CCCcEEEEEEcccCCCC--------hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC
Q psy6508 2 EQHTEVAIKCIDKTKVS--------ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE 73 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~--------~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~ 73 (477)
.+|+.||+|.++..... ....+.+.+|+.+++.++|||++++++++...+..++||||++|++|.+++.+.+
T Consensus 24 ~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 103 (272)
T cd06629 24 TTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYG 103 (272)
T ss_pred CCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhcc
Confidence 46889999988643211 1123568899999999999999999999999999999999999999999998878
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccC
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~ 153 (477)
.+++..+..++.|++.||.|||++|++||||+|+||+++.+. .+...|||.+.............+..++..|.|||..
T Consensus 104 ~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~ 182 (272)
T cd06629 104 RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG-ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVI 182 (272)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC-eEEEeeccccccccccccccccccccCCccccCHHHh
Confidence 899999999999999999999999999999999999997643 3444599987643321111112234456789999976
Q ss_pred CCC-----CcccccCcceEEEEEE--eeecccc
Q psy6508 154 SSK-----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 154 ~~~-----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
... .++|+ |++|++++++ +..||..
T Consensus 183 ~~~~~~~~~~~Dv-~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 183 HSYSQGYSAKVDI-WSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred ccccCCCCccchh-HHHHHHHHHHHhCCCCCcC
Confidence 543 56899 9999999999 6677753
No 251
>KOG0579|consensus
Probab=99.90 E-value=4e-25 Score=221.79 Aligned_cols=195 Identities=26% Similarity=0.330 Sum_probs=154.3
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQCQQ 82 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~~~~ 82 (477)
+-.-|-|++... +.+..+++.-|+.||..+.||+|+++++.|..++.+||..|||.||-....+-. ...+.+.++..
T Consensus 57 ~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqv 134 (1187)
T KOG0579|consen 57 KLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQV 134 (1187)
T ss_pred hhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHH
Confidence 334456766443 456778999999999999999999999999999999999999999999988754 44799999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-----
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK----- 156 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~----- 156 (477)
+++|++.||.|||+++|+|||||..|||++- +.+|+. |||++.... .......+.+||+.||+||+....
T Consensus 135 vc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLA--DFGVSAKn~--~t~qkRDsFIGTPYWMAPEVvmCET~KD~ 210 (1187)
T KOG0579|consen 135 VCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLA--DFGVSAKNK--STRQKRDSFIGTPYWMAPEVVMCETFKDQ 210 (1187)
T ss_pred HHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeee--cccccccch--hHHhhhccccCCcccccchheeeccccCC
Confidence 9999999999999999999999999999974 677777 999975433 333455789999999999987655
Q ss_pred ---CcccccCcceEEEEEE--eeecccccccc-------------CCCCCcchHHHHHHHHHHhhhh
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFASQIRT-------------GWLRDSEEKELGNHLKRALEPA 205 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~~~r~-------------~~~~~~~~~~l~~~i~~~l~~~ 205 (477)
.++|| ||+|++++|| +-+|...-... ...+..-...++.++++++...
T Consensus 211 PYDykaDi-WSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Kn 276 (1187)
T KOG0579|consen 211 PYDYKADI-WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKN 276 (1187)
T ss_pred CchhhhhH-HhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcC
Confidence 56899 9999999999 44555432211 1133444566677777665443
No 252
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.90 E-value=1.1e-23 Score=202.32 Aligned_cols=170 Identities=22% Similarity=0.329 Sum_probs=134.3
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~ 81 (477)
+++.+|+|.+...... ..++.+|+.+++.++||||+++++++...+..|++|||++|++|.+++..+ ..+++..+.
T Consensus 27 ~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 103 (256)
T cd05059 27 GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLL 103 (256)
T ss_pred CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHH
Confidence 4567999998654433 245788999999999999999999999999999999999999999999764 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.++ .+.+.|||.+.......... .........|+|||...+. .+
T Consensus 104 ~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~-~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~ 181 (256)
T cd05059 104 DMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN-VVKVSDFGLARYVLDDQYTS-SQGTKFPVKWAPPEVFDYSRFSSK 181 (256)
T ss_pred HHHHHHHHHHHHHHHCCcccccccHhhEEECCCC-cEEECCcccceecccccccc-cCCCCCCccccCHHHhccCCCCch
Confidence 9999999999999999999999999999997653 34445999875432211111 1111223469999987655 67
Q ss_pred ccccCcceEEEEEE---eeeccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~ 178 (477)
+|+ |++|+++|++ +..||.
T Consensus 182 ~Di-~slG~il~~l~~~g~~p~~ 203 (256)
T cd05059 182 SDV-WSFGVLMWEVFSEGKMPYE 203 (256)
T ss_pred hhH-HHHHHHHHHHhccCCCCCC
Confidence 899 9999999997 456665
No 253
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.90 E-value=1.4e-24 Score=207.90 Aligned_cols=175 Identities=27% Similarity=0.384 Sum_probs=143.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
.+|+.||+|.+.....+....+.+.+|+.+++.++||||+++++.+...+..|+++||+++++|.+++.... .+++..
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 102 (257)
T cd08225 23 SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQ 102 (257)
T ss_pred CCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHH
Confidence 467889999987765444455678899999999999999999999999999999999999999999997643 478999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++|+||||+||++++++..+...|||.+....... .......++..|+|||...+.
T Consensus 103 ~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~ 180 (257)
T cd08225 103 ILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--ELAYTCVGTPYYLSPEICQNRPYN 180 (257)
T ss_pred HHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc--ccccccCCCccccCHHHHcCCCCC
Confidence 999999999999999999999999999999998765444556999775443221 111233466789999987654
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 181 ~~~Dv-~slG~il~~l~~g~~p~~~ 204 (257)
T cd08225 181 NKTDI-WSLGCVLYELCTLKHPFEG 204 (257)
T ss_pred chhhH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 5667653
No 254
>KOG0614|consensus
Probab=99.90 E-value=1.2e-25 Score=220.78 Aligned_cols=170 Identities=24% Similarity=0.431 Sum_probs=149.2
Q ss_pred EEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHH
Q psy6508 6 EVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV 84 (477)
Q Consensus 6 ~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~i~ 84 (477)
.+|+|++++..+- .++.+.+..|-.+|...+.|+||++|..|.++.++|+.||.|-||.|...+.+.+.+++...+.++
T Consensus 447 ~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~ 526 (732)
T KOG0614|consen 447 TFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYV 526 (732)
T ss_pred HHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhH
Confidence 4889999887764 355667899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cccc
Q psy6508 85 RQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLE 160 (477)
Q Consensus 85 ~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~D 160 (477)
.-+++|++|||++||++|||||+|++++.+ -++++ |||.++..... ....|..||+.|.+||+...+ .++|
T Consensus 527 acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLV--DFGFAKki~~g---~KTwTFcGTpEYVAPEIILnKGHD~avD 601 (732)
T KOG0614|consen 527 ACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLV--DFGFAKKIGSG---RKTWTFCGTPEYVAPEIILNKGHDRAVD 601 (732)
T ss_pred HHHHHHHHHHHhcCceeccCChhheeeccCCceEEe--ehhhHHHhccC---CceeeecCCcccccchhhhccCcchhhH
Confidence 999999999999999999999999999864 55665 99998764432 223578889999999998766 8899
Q ss_pred ccCcceEEEEEE--eeecccccc
Q psy6508 161 YQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 161 i~~s~G~il~e~--~~~Pf~~~~ 181 (477)
+ |++|+++||+ |.+||++.+
T Consensus 602 y-WaLGIli~ELL~G~pPFs~~d 623 (732)
T KOG0614|consen 602 Y-WALGILIYELLTGSPPFSGVD 623 (732)
T ss_pred H-HHHHHHHHHHHcCCCCCCCCc
Confidence 9 9999999999 789998643
No 255
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.90 E-value=2.1e-23 Score=201.74 Aligned_cols=171 Identities=17% Similarity=0.293 Sum_probs=132.8
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----CCCCHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH----EKLSEFQC 80 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----~~l~~~~~ 80 (477)
..+++|.++... .....+.+.+|+.+++.++||||+++++.+......|++|||+++++|.+++.+. ...+...+
T Consensus 23 ~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 101 (268)
T cd05086 23 ARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLL 101 (268)
T ss_pred ceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHH
Confidence 346677765443 2344568999999999999999999999999999999999999999999999764 24667788
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC-----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS----- 155 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~----- 155 (477)
..++.|++.||+|||++|++||||||+|||++.+. .+...|||.+.......+........++..|+|||....
T Consensus 102 ~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~-~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 180 (268)
T cd05086 102 QRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL-TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGL 180 (268)
T ss_pred HHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc-cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCcc
Confidence 89999999999999999999999999999997643 344459998654332222222334456678999998642
Q ss_pred -----CCcccccCcceEEEEEE---eeeccc
Q psy6508 156 -----KTSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 156 -----~~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
..++|+ ||+|+++||+ +..||.
T Consensus 181 ~~~~~~~~~Di-wslG~~l~el~~~~~~p~~ 210 (268)
T cd05086 181 ITAEQTKPSNV-WALGVTLWELFENAAQPYS 210 (268)
T ss_pred ccCCCCCcchh-HHHHHHHHHHHhCCCCCCC
Confidence 156899 9999999998 344654
No 256
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.90 E-value=1.7e-23 Score=203.87 Aligned_cols=173 Identities=23% Similarity=0.345 Sum_probs=141.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
.+|+.||+|++......+...+.+.+|+.++++++||||+++++++..+...|+|+||+ +++|.+++... ..+++..+
T Consensus 23 ~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~ 101 (286)
T cd07832 23 ETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQV 101 (286)
T ss_pred CCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHH
Confidence 46889999999877655555678999999999999999999999999999999999999 89999998653 46899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.++.|++.||.|||++|++|+||||+||+++++. .+.+.|||.+........ .......++..|+|||...+.
T Consensus 102 ~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~-~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~ 179 (286)
T cd07832 102 KSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG-VLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYD 179 (286)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC-cEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCC
Confidence 99999999999999999999999999999998643 234459998765432211 112235677889999987543
Q ss_pred CcccccCcceEEEEEE--eeeccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|++++++ +.+||.
T Consensus 180 ~~~Di-~slG~~l~~l~tg~~~~~ 202 (286)
T cd07832 180 PGVDL-WAVGCIFAELLNGSPLFP 202 (286)
T ss_pred chhHH-HHHHHHHHHHHcCCcCcC
Confidence 67899 9999999999 444444
No 257
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.89 E-value=1.6e-23 Score=204.71 Aligned_cols=173 Identities=22% Similarity=0.294 Sum_probs=136.6
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
+++.||+|.+.... .......+.+|+.++++++||||+++++++......|++|||+++++|.+++....
T Consensus 34 ~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 112 (288)
T cd05050 34 PFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSH 112 (288)
T ss_pred cceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccc
Confidence 56789999987543 33445678999999999999999999999999899999999999999999997431
Q ss_pred -------------CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCe
Q psy6508 74 -------------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNT 140 (477)
Q Consensus 74 -------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t 140 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++.+. .+...|||.+.............+
T Consensus 113 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~ 191 (288)
T cd05050 113 STSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENM-VVKIADFGLSRNIYSADYYKASEN 191 (288)
T ss_pred cccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCC-ceEECccccceecccCccccccCC
Confidence 367888999999999999999999999999999999997643 344469998765433222222222
Q ss_pred EEEeccccccccCCCC---CcccccCcceEEEEEE---eeeccc
Q psy6508 141 KVICSVFEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 141 ~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
......|+|||...+. .++|+ ||+|+++|++ +..||.
T Consensus 192 ~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 192 DAIPIRWMPPESIFYNRYTTESDV-WAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred CccChhhcCHHHHhcCCCCchhHH-HHHHHHHHHHHhCCCCCCC
Confidence 2334569999987654 67899 9999999998 335664
No 258
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.89 E-value=1.6e-23 Score=206.59 Aligned_cols=168 Identities=24% Similarity=0.337 Sum_probs=132.1
Q ss_pred EEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-----------
Q psy6508 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE----------- 73 (477)
Q Consensus 6 ~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----------- 73 (477)
.+|+|.++.. ......+.+.+|+.++.++ +||||+++++++..++.+|++|||+++++|.+++...+
T Consensus 36 ~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 114 (303)
T cd05088 36 DAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 114 (303)
T ss_pred eEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhccccccccccccc
Confidence 4577776532 2344456788999999999 89999999999999999999999999999999997542
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccc
Q psy6508 74 -----KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFE 148 (477)
Q Consensus 74 -----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ 148 (477)
.+++..++.++.|++.||+|||++|++||||||+||+++.+. ++.++|||.+...... ........+..|+
T Consensus 115 ~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~-~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~ 190 (303)
T cd05088 115 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY-VAKIADFGLSRGQEVY---VKKTMGRLPVRWM 190 (303)
T ss_pred ccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC-cEEeCccccCcccchh---hhcccCCCccccc
Confidence 478999999999999999999999999999999999997643 3445699987532211 1111122345699
Q ss_pred ccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 149 PREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 149 ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|||...+. .++|+ ||+|++++|+ +..||..
T Consensus 191 aPE~~~~~~~~~~~Di-~slG~il~ellt~g~~p~~~ 226 (303)
T cd05088 191 AIESLNYSVYTTNSDV-WSYGVLLWEIVSLGGTPYCG 226 (303)
T ss_pred CHHHHhccCCcccccc-hhhhhHHHHHHhcCCCCccc
Confidence 99987654 67899 9999999998 5577753
No 259
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.89 E-value=1.8e-24 Score=207.98 Aligned_cols=159 Identities=20% Similarity=0.235 Sum_probs=129.7
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQF 83 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~~i 83 (477)
..||+|.+.... ....+.+.+|..+++.++||||+++++++..+...++||||+++|+|.+++..++ .+++..++.+
T Consensus 28 ~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 105 (258)
T cd05078 28 TEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEV 105 (258)
T ss_pred chhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHH
Confidence 458888875432 3344678899999999999999999999999899999999999999999997654 5899999999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeeccCcc-------eeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-------KLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~-------rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
+.|++.||.|||++||+||||||+||+++.++. .+...|||....... ..+..++..|+|||...+.
T Consensus 106 ~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~ 179 (258)
T cd05078 106 AKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP------KEILLERIPWVPPECIENP 179 (258)
T ss_pred HHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC------chhccccCCccCchhccCC
Confidence 999999999999999999999999999976432 144568887643221 1234456679999988653
Q ss_pred ----CcccccCcceEEEEEE
Q psy6508 157 ----TSLEYQRSKGELYVEF 172 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~ 172 (477)
.++|+ ||+|+++|++
T Consensus 180 ~~~~~~~Di-wslG~~l~~l 198 (258)
T cd05078 180 QNLSLAADK-WSFGTTLWEI 198 (258)
T ss_pred CCCCchhhH-HHHHHHHHHH
Confidence 56899 9999999998
No 260
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.89 E-value=2.6e-23 Score=202.34 Aligned_cols=172 Identities=22% Similarity=0.305 Sum_probs=136.2
Q ss_pred CCCcEEEEEEcccCCCChh-HHHHHHHHHH---HHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVSEN-RFDSIVNEIK---ALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~-~~~~~~~E~~---il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~ 77 (477)
.+++.||+|.+.+...... ....+..|.. .++...||||+++++.+...+..|+||||++|++|.+++...+.+++
T Consensus 17 ~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~ 96 (278)
T cd05606 17 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 96 (278)
T ss_pred cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCH
Confidence 4688999999877644321 1222344443 34445799999999999999999999999999999999988778999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
..++.++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+...... ...+..++..|+|||...+.
T Consensus 97 ~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~-~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~ 171 (278)
T cd05606 97 AEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGV 171 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC-CEEEccCcCccccCcc----CCcCcCCCcCCcCcHHhcCCC
Confidence 99999999999999999999999999999999997653 3445699987543321 12344677889999997633
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 172 ~~~~~~Di-~s~G~~l~~l~~g~~p~~~ 198 (278)
T cd05606 172 AYDSSADW-FSLGCMLFKLLRGHSPFRQ 198 (278)
T ss_pred CCCcccch-HhHHHHHHHHHhCCCCCCC
Confidence 66899 9999999999 6778864
No 261
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.89 E-value=3.8e-24 Score=205.66 Aligned_cols=170 Identities=23% Similarity=0.365 Sum_probs=136.5
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHH-hcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~-~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+|+.||+|.+++.... ......+..|..++. ..+|||++++++.+..++.+|+++||++|++|.+++...+.+++..
T Consensus 19 ~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 98 (260)
T cd05611 19 STGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDW 98 (260)
T ss_pred CCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHH
Confidence 46889999998765432 222334556655544 4589999999999999999999999999999999998877899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||+.|++||||+|+||+++.+. .+.+.|||.+..... .....++..|++||...+.
T Consensus 99 ~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~ 171 (260)
T cd05611 99 AKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG-HLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDD 171 (260)
T ss_pred HHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-cEEEeecccceeccc------cccCCCCcCccChhhhcCCCCc
Confidence 999999999999999999999999999999997642 344459997754322 2234466789999988765
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||..
T Consensus 172 ~~~Dv-~slG~il~~l~~g~~p~~~ 195 (260)
T cd05611 172 KMSDW-WSLGCVIFEFLFGYPPFHA 195 (260)
T ss_pred chhhh-HHHHHHHHHHHHCCCCCCC
Confidence 57899 9999999999 6778763
No 262
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.89 E-value=2.9e-23 Score=200.86 Aligned_cols=175 Identities=20% Similarity=0.318 Sum_probs=137.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC------eEEEEEecCCCCCHHHHHHhC----
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER------YVYIILEYCDGGDLCSFIRSH---- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~------~~~lv~e~~~g~sL~~~l~~~---- 72 (477)
+++.||||++..........+++.+|+.++++++||||+++++++.... ..+++++|+++++|.+++...
T Consensus 26 ~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 105 (273)
T cd05074 26 SFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGE 105 (273)
T ss_pred CceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccC
Confidence 5789999999776656666778999999999999999999999876432 357899999999999887532
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccc
Q psy6508 73 --EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150 (477)
Q Consensus 73 --~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~pp 150 (477)
..++...+..++.|++.||+|||++||+||||||+||+++++. .+...|||.+...........+.....+..|++|
T Consensus 106 ~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~p 184 (273)
T cd05074 106 EPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENM-TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLAL 184 (273)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCC-CEEECcccccccccCCcceecCCCccCchhhcCH
Confidence 1478899999999999999999999999999999999997542 3345699987654333222233334455679999
Q ss_pred ccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 151 EIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 151 E~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|..... .++|+ ||+|+++|++ +..||.+
T Consensus 185 e~~~~~~~~~~sDi-~slG~il~el~~~g~~p~~~ 218 (273)
T cd05074 185 ESLADNVYTTHSDV-WAFGVTMWEIMTRGQTPYAG 218 (273)
T ss_pred hHHhcCccchhhhh-HHHHHHHHHHhhCCCCCCCC
Confidence 987655 67899 9999999998 4566653
No 263
>PLN00207 polyribonucleotide nucleotidyltransferase; Provisional
Probab=99.89 E-value=3e-22 Score=214.30 Aligned_cols=225 Identities=16% Similarity=0.205 Sum_probs=183.7
Q ss_pred CCCCceeec---cCcceeecccccceecccCCcccccCCeEEEeccc-cccccCCCC-CcccccCcceEEEEEEeeeccc
Q psy6508 104 LKPQNILIK---NNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVF-EPREIPSSK-TSLEYQRSKGELYVEFKFAPFA 178 (477)
Q Consensus 104 lkp~NIll~---~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y-~ppE~~~~~-~~~Di~~s~G~il~e~~~~Pf~ 178 (477)
|-.+++-+| .+++|.+.+..|....++||++++.|+|++.+.++ +|.+..... ...+. -..+.+++++.++||+
T Consensus 433 i~~~g~R~DGR~~~eiRpI~~e~G~Lp~A~GSAlf~~G~TqVLatVtlGp~~~~q~~d~l~~~-~~~~~f~~~y~fPPfs 511 (891)
T PLN00207 433 IVEGGKRSDGRTPDEIRPINSSCGLLPRAHGSALFTRGETQALAVVTLGDKQMAQRIDNLVDA-DEVKRFYLQYSFPPSC 511 (891)
T ss_pred HhcCCCCCCCCCcCccceEEEEeCCcCCCCceEEEEECCeEEEEEEEecCccccccccccccc-cceeeEEEEEEcCCCC
Confidence 444555554 36899999999999999999999999999999984 776543222 11122 2357788899999999
Q ss_pred cccc-cCCCCCcchHHHHHHHHHHhhhhhhcc-cCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEEEEE
Q psy6508 179 SQIR-TGWLRDSEEKELGNHLKRALEPAVCRH-EFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSST 256 (477)
Q Consensus 179 ~~~r-~~~~~~~~~~~l~~~i~~~l~~~i~~~-~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~a~s 256 (477)
...+ +...+.+++....++++++++|.+..+ .||. .|+|.++||++||+...+++||+++||+||||||+++|+|++
T Consensus 512 ~ge~~r~g~psrREi~hg~L~eRALrpvip~~~~fP~-tIrV~~~VLesDGSssmAaV~aaSLALmDAGIPmk~~VAGvs 590 (891)
T PLN00207 512 VGEVGRIGAPSRREIGHGMLAERALEPILPSEDDFPY-TIRVESTITESNGSSSMASVCGGCLALQDAGVPVKCPIAGIA 590 (891)
T ss_pred CccccCCCCCCHHHHHHHHHHHHHHHHhCCcccCCCE-EEEEEEEEEeCCCChHHHHHHHHHHHHHhcCCCccCceeEEE
Confidence 6444 333456677888999999999999875 8995 899999999999999999999999999999999999999999
Q ss_pred EEee-C-------Ce--EEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEeee---cHHHHHHHHHHHH
Q psy6508 257 LALR-G-------GL--TFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTI---QQERLADHIEQLI 323 (477)
Q Consensus 257 ~~~~-~-------~~--~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~~---~~~~~~~~l~~~~ 323 (477)
+++. + +. +++||+..|+. .+.+.+.+.+..+.|+.+++++++ +.+.+.++|+.|.
T Consensus 591 vGli~d~~~~~~~g~~~IL~Dp~g~Ed~------------~gdmDfkVAgT~~gIt~iqmd~k~~gis~e~l~eAL~~A~ 658 (891)
T PLN00207 591 MGMVLDTEEFGGDGSPLILSDITGSEDA------------SGDMDFKVAGNEDGITAFQMDIKVGGITLPIMERALLQAK 658 (891)
T ss_pred EEEEecccccCCCCcEEEEeCCCHHHHh------------cCCceEEEEecccceEEEEEecccCCCCHHHHHHHHHHHH
Confidence 9998 3 23 56799999988 345555555777899999998765 8999999999999
Q ss_pred hcccchhhHHHHhHhhhccc
Q psy6508 324 GCCESLCTDRVQKLVSDHVT 343 (477)
Q Consensus 324 ~~~~~i~~~~i~~~l~~~~~ 343 (477)
++|..+... |++++...-.
T Consensus 659 ~g~~~Il~~-M~~~i~~pr~ 677 (891)
T PLN00207 659 DGRKHILAE-MSKCSPPPSK 677 (891)
T ss_pred HHHHHHHHH-HHHHHhhhhh
Confidence 999999999 9999866543
No 264
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.89 E-value=1.9e-23 Score=203.47 Aligned_cols=172 Identities=23% Similarity=0.327 Sum_probs=135.7
Q ss_pred CCCcEEEEEEcccCCCChhH-HHHHHHHHHHHHh---cCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVSENR-FDSIVNEIKALKL---LHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~-~~~~~~E~~il~~---l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~ 77 (477)
.+++.||+|.+.+....... ...+.+|..+++. .+||||+++++.+..++..++||||++|++|.+++..++.+++
T Consensus 17 ~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~ 96 (279)
T cd05633 17 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSE 96 (279)
T ss_pred CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCH
Confidence 46889999998766543222 2234455544443 4799999999999999999999999999999999988888999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC-C
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS-K 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~-~ 156 (477)
..+..++.|++.||.|||++|++||||||+||+++.++ .+...|||.+....... .....++..|+|||.... .
T Consensus 97 ~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~-~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 171 (279)
T cd05633 97 KEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGT 171 (279)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC-CEEEccCCcceeccccC----ccCcCCCcCccCHHHhcCCC
Confidence 99999999999999999999999999999999997653 34456999875433211 123457788999998753 2
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 172 ~~~~~~Di-~slG~~l~~l~~g~~pf~~ 198 (279)
T cd05633 172 AYDSSADW-FSLGCMLFKLLRGHSPFRQ 198 (279)
T ss_pred CCCchhhh-HHHHHHHHHHHhCCCCcCC
Confidence 67899 9999999999 6778864
No 265
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.89 E-value=2.2e-23 Score=201.34 Aligned_cols=173 Identities=21% Similarity=0.285 Sum_probs=136.8
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQ 82 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~ 82 (477)
+..||+|.++... .....+.+.+|+.++++++||||+++++++..++..|++|||+++++|.+++... +.+++..+..
T Consensus 32 ~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 110 (267)
T cd05066 32 EIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVG 110 (267)
T ss_pred ceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHH
Confidence 3479999986543 3445578999999999999999999999999999999999999999999999765 4689999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc-cccCCeEEEeccccccccCCCC---Cc
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY-IEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~-~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
++.|++.||.|||++|++||||||+||+++.+. .+...|||.+........ .........+..|+|||...+. .+
T Consensus 111 i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~ 189 (267)
T cd05066 111 MLRGIASGMKYLSDMGYVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 189 (267)
T ss_pred HHHHHHHHHHHHHHCCEeehhhchhcEEECCCC-eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCch
Confidence 999999999999999999999999999997653 455569998765432111 0001111223469999988754 67
Q ss_pred ccccCcceEEEEEE---eeecccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
+|+ |++|+++|++ +..||..
T Consensus 190 ~Dv-~slG~~l~ell~~g~~p~~~ 212 (267)
T cd05066 190 SDV-WSYGIVMWEVMSYGERPYWE 212 (267)
T ss_pred hhh-HHHHHHHHHHhcCCCCCccc
Confidence 899 9999999985 5567653
No 266
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.89 E-value=3e-23 Score=201.62 Aligned_cols=172 Identities=22% Similarity=0.340 Sum_probs=141.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.++... .....+.+.+|+.++++++||||+++++.+.+++..|+||||++|++|.+++.. +++++..+.
T Consensus 27 ~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~ 104 (277)
T cd06640 27 RTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQIA 104 (277)
T ss_pred cCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CCCCHHHHH
Confidence 367899999987553 234457899999999999999999999999999999999999999999999875 578999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++|+||+|+||+++.+. ++...|||.+....... .......++..|.|||...+. .+
T Consensus 105 ~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~ 181 (277)
T cd06640 105 TMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIQQSAYDSK 181 (277)
T ss_pred HHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC-CEEEcccccceeccCCc--cccccccCcccccCHhHhccCCCccH
Confidence 9999999999999999999999999999997643 34456999876543221 112234566789999987665 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|+++|++ +..||..
T Consensus 182 ~Dv-~slG~il~el~tg~~p~~~ 203 (277)
T cd06640 182 ADI-WSLGITAIELAKGEPPNSD 203 (277)
T ss_pred HHH-HHHHHHHHHHHHCCCCCCC
Confidence 899 9999999999 6677764
No 267
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.89 E-value=1.5e-23 Score=200.97 Aligned_cols=173 Identities=23% Similarity=0.357 Sum_probs=141.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
.+|+.||+|.+..........+.+.+|+.++++++||||+++++.+...+..|+|+||+++++|.+++.... .+++..
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~ 102 (256)
T cd08218 23 EDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQ 102 (256)
T ss_pred CCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHH
Confidence 468899999987665555556788999999999999999999999999999999999999999999987643 588999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++|+||+|+||+++.+. .+...|||.......... ......++..|.|||...+.
T Consensus 103 ~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~-~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~ 179 (256)
T cd08218 103 ILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG-TIKLGDFGIARVLNSTVE--LARTCIGTPYYLSPEICENRPYN 179 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-CEEEeeccceeecCcchh--hhhhccCCccccCHHHhCCCCCC
Confidence 999999999999999999999999999999997643 234459998765432211 11233466789999997665
Q ss_pred CcccccCcceEEEEEE--eeeccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|++++++ +..||.
T Consensus 180 ~~~Dv-~slG~i~~~l~~g~~~~~ 202 (256)
T cd08218 180 NKSDI-WALGCVLYEMCTLKHAFE 202 (256)
T ss_pred Cccch-hHHHHHHHHHHcCCCCcc
Confidence 67899 9999999999 556665
No 268
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.89 E-value=5e-24 Score=206.25 Aligned_cols=164 Identities=21% Similarity=0.262 Sum_probs=132.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.+|+|.+....... .|......+ +||||+++++.+...+..|+||||++|++|.+++.....+++..+
T Consensus 39 ~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~ 111 (267)
T PHA03390 39 PTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEV 111 (267)
T ss_pred CCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHH
Confidence 467889999987653322 122222223 799999999999999999999999999999999988778999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|+++||.|||+.|++||||||+||+++.+.-++...|||.+...... .+..++..|+|||...+. .
T Consensus 112 ~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~ 185 (267)
T PHA03390 112 KKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDV 185 (267)
T ss_pred HHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC------ccCCCCCcccChhhhcCCCCCc
Confidence 9999999999999999999999999999999876534455699987654332 123456789999998665 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ ||+|++++++ +..||..
T Consensus 186 ~~Dv-wslG~il~~l~~g~~p~~~ 208 (267)
T PHA03390 186 SFDW-WAVGVLTYELLTGKHPFKE 208 (267)
T ss_pred hhhH-HHHHHHHHHHHHCCCCCCC
Confidence 6899 9999999999 6788864
No 269
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.89 E-value=1e-23 Score=207.47 Aligned_cols=172 Identities=24% Similarity=0.366 Sum_probs=137.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
.+++.||+|.++..... .....+.+|+.++++++||||+++++++..++..++||||++ ++|.+++... ..+++..+
T Consensus 29 ~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~ 106 (301)
T cd07873 29 LTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINMHNV 106 (301)
T ss_pred CCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCCCCCHHHH
Confidence 46789999998755422 223457789999999999999999999999999999999997 6999988764 46899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+....... .......++..|+|||...+.
T Consensus 107 ~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~-~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~ 183 (301)
T cd07873 107 KLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG-ELKLADFGLARAKSIPT--KTYSNEVVTLWYRPPDILLGSTDYS 183 (301)
T ss_pred HHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC-cEEECcCcchhccCCCC--CcccccceeecccCcHHHhCCCCCc
Confidence 99999999999999999999999999999997653 33445999875432111 111234567889999987553
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|+| +..||..
T Consensus 184 ~~~Dv-~slG~~l~el~tg~~~f~~ 207 (301)
T cd07873 184 TQIDM-WGVGCIFYEMSTGRPLFPG 207 (301)
T ss_pred cHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 6677763
No 270
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.89 E-value=2.9e-23 Score=200.42 Aligned_cols=176 Identities=24% Similarity=0.316 Sum_probs=140.0
Q ss_pred CCCcEEEEEEcccCCCC---hhHHHHHHHHHHHHHhcCCCCccceEEEEEe--CCeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVS---ENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+++.||+|.+...... .+..+.+.+|+.++++++||||+++++++.. ...+++++||+++++|.+++...+.++
T Consensus 25 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~ 104 (266)
T cd06651 25 DTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALT 104 (266)
T ss_pred CCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCC
Confidence 46889999998765432 2344678899999999999999999998875 367899999999999999998877899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccccc-CCeEEEeccccccccCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQ-GNTKVICSVFEPREIPSS 155 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~-g~t~v~~~~y~ppE~~~~ 155 (477)
+.....++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+........... .....++..|.|||...+
T Consensus 105 ~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 183 (266)
T cd06651 105 ESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG-NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG 183 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC-CEEEccCCCccccccccccCCccccCCccccccCHHHhCC
Confidence 999999999999999999999999999999999997653 344559998754332111111 112335667999998876
Q ss_pred C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ |++|++++++ +..||..
T Consensus 184 ~~~~~~~Dv-~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 184 EGYGRKADV-WSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred CCCCchhhh-HHHHHHHHHHHHCCCCccc
Confidence 5 57899 9999999999 6678764
No 271
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.89 E-value=2.1e-23 Score=203.50 Aligned_cols=171 Identities=21% Similarity=0.244 Sum_probs=142.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++|+.||+|++.... .....+.+.+|+.+++.++||||+++++.+...+..|+||||+++++|.+++.+.+.+++..+.
T Consensus 28 ~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 106 (284)
T cd06620 28 PTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILG 106 (284)
T ss_pred CCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHH
Confidence 368899999886543 2344567899999999999999999999999999999999999999999999887789999999
Q ss_pred HHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||.|||+ .|++||||||+||+++++. ++.+.|||++.....+ ......++..|+|||...+. .
T Consensus 107 ~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-~~~l~d~gl~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~ 181 (284)
T cd06620 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG-QIKLCDFGVSGELINS----IADTFVGTSTYMSPERIQGGKYTV 181 (284)
T ss_pred HHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC-cEEEccCCcccchhhh----ccCccccCcccCCHHHHccCCCCc
Confidence 999999999999997 6999999999999997643 3445699986533221 11234677889999987654 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ |++|++++++ +..||..
T Consensus 182 ~~Di-~slG~~l~~l~tg~~p~~~ 204 (284)
T cd06620 182 KSDV-WSLGISIIELALGKFPFAF 204 (284)
T ss_pred cchH-HHHHHHHHHHHhCCCCCcc
Confidence 7899 9999999999 6788874
No 272
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.89 E-value=4e-23 Score=198.69 Aligned_cols=176 Identities=23% Similarity=0.361 Sum_probs=145.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.|++|.++.........+.+.+|+.+++.++||||+++++.+...+..++++||+++++|.+++.....+++..+.
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 102 (264)
T cd06626 23 DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIR 102 (264)
T ss_pred CCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHH
Confidence 46889999999877655556788999999999999999999999999999999999999999999999887778999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccccc--CCeEEEeccccccccCCCC---
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQ--GNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~--g~t~v~~~~y~ppE~~~~~--- 156 (477)
.++.|++.||.|||++|++|+||+|+||+++++. .+.+.|||.+........... .....++..|.|||...+.
T Consensus 103 ~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~-~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~ 181 (264)
T cd06626 103 VYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG-VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGK 181 (264)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCC
Confidence 9999999999999999999999999999998743 344459998765443222111 1123456689999987643
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 182 ~~~~~~Dv-~s~G~il~~l~~g~~pf~~ 208 (264)
T cd06626 182 GHGRAADI-WSLGCVVLEMATGKRPWSE 208 (264)
T ss_pred CCCcccch-HHHHHHHHHHHhCCCCccC
Confidence 56899 9999999999 7788864
No 273
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.89 E-value=1.6e-23 Score=205.57 Aligned_cols=172 Identities=22% Similarity=0.329 Sum_probs=139.2
Q ss_pred CCCcEEEEEEcccCCCC---hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCH
Q psy6508 2 EQHTEVAIKCIDKTKVS---ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~ 77 (477)
.+|+.||||.++..... ......+.+|+.++++++||||+++++++..++..++||||+ +++|.+++.... .+++
T Consensus 23 ~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~ 101 (298)
T cd07841 23 ETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTP 101 (298)
T ss_pred CCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCH
Confidence 46889999999776543 233456788999999999999999999999999999999999 799999998765 7999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
..+..++.|+++||.|||++|++|+||||+||+++.++ .+.+.|||.+....... ........+..|.|||...+.
T Consensus 102 ~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~ 178 (298)
T cd07841 102 ADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG-VLKLADFGLARSFGSPN--RKMTHQVVTRWYRAPELLFGAR 178 (298)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC-CEEEccceeeeeccCCC--ccccccccceeeeCHHHHhCCC
Confidence 99999999999999999999999999999999998653 34445999886543221 111233456789999987542
Q ss_pred ---CcccccCcceEEEEEE--eeeccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|++++++ +.+||.
T Consensus 179 ~~~~~~Dv-~slG~il~e~~~g~~~~~ 204 (298)
T cd07841 179 HYGVGVDM-WSVGCIFAELLLRVPFLP 204 (298)
T ss_pred CCCcHHHH-HHHHHHHHHHHcCCcccc
Confidence 66899 9999999998 544554
No 274
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.89 E-value=1.1e-23 Score=202.38 Aligned_cols=171 Identities=26% Similarity=0.354 Sum_probs=137.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~~ 80 (477)
+++.+|+|.+.... ......+.+|+.+++.++||||+++++++......+++|||+++++|.+++.+. ..+++..+
T Consensus 29 ~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 106 (261)
T cd05148 29 NRVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASL 106 (261)
T ss_pred CCCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHH
Confidence 47889999987653 223456889999999999999999999999999999999999999999999763 36899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++|++||||||+||+++++. .+.+.|||.+.......... .+..++..|+|||...+. .
T Consensus 107 ~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~-~~kl~d~g~~~~~~~~~~~~--~~~~~~~~~~~PE~~~~~~~~~ 183 (261)
T cd05148 107 IDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL-VCKVADFGLARLIKEDVYLS--SDKKIPYKWTAPEAASHGTFST 183 (261)
T ss_pred HHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc-eEEEccccchhhcCCccccc--cCCCCceEecCHHHHccCCCCc
Confidence 99999999999999999999999999999997653 34446999876543322211 122344569999987654 6
Q ss_pred cccccCcceEEEEEE---eeecccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
++|+ |++|+++|++ +..||..
T Consensus 184 ~~Di-wslG~~l~~l~~~g~~p~~~ 207 (261)
T cd05148 184 KSDV-WSFGILLYEMFTYGQVPYPG 207 (261)
T ss_pred hhhH-HHHHHHHHHHHcCCCCCCCc
Confidence 7899 9999999998 3566653
No 275
>KOG0612|consensus
Probab=99.89 E-value=5.4e-25 Score=233.94 Aligned_cols=173 Identities=25% Similarity=0.404 Sum_probs=149.6
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|++++..+- .....-|+.|-.+|..-+.+-|+.++-+|+++.++|+||||++||+|-.++.+.+++|+..+
T Consensus 98 ~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~A 177 (1317)
T KOG0612|consen 98 STEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWA 177 (1317)
T ss_pred ccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHH
Confidence 47889999999886543 22335588999999999999999999999999999999999999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-Ccceeecccccceecc--cCCcccccCCeEEEeccccccccCCCC-
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKA--KGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~--~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
+.++..|+.||.-||+.|+|||||||+||||+. |.+|+. |||.+... +|.. ...+.||||-|.+||++...
T Consensus 178 rFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLA--DFGsClkm~~dG~V---~s~~aVGTPDYISPEvLqs~~ 252 (1317)
T KOG0612|consen 178 RFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLA--DFGSCLKMDADGTV---RSSVAVGTPDYISPEVLQSQG 252 (1317)
T ss_pred HHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeec--cchhHHhcCCCCcE---EeccccCCCCccCHHHHHhhc
Confidence 999999999999999999999999999999986 566665 99988654 4543 34578999999999987532
Q ss_pred -------CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 -------TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 -------~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
+..|+ ||+|+++||| |..||...
T Consensus 253 ~~~g~yG~ecDw-WSlGV~~YEMlyG~TPFYad 284 (1317)
T KOG0612|consen 253 DGKGEYGRECDW-WSLGVFMYEMLYGETPFYAD 284 (1317)
T ss_pred CCccccCCccch-hhhHHHHHHHHcCCCcchHH
Confidence 67899 9999999999 77999754
No 276
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.89 E-value=5.6e-24 Score=207.66 Aligned_cols=169 Identities=27% Similarity=0.404 Sum_probs=140.2
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~ 81 (477)
+++.|++|++..... ..+.+.+|+.+++.++|||++++++.+..++..|+++||++|++|.+++.... .+++..+.
T Consensus 43 ~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~ 119 (286)
T cd06614 43 TGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIA 119 (286)
T ss_pred CCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHH
Confidence 578899999876543 45678899999999999999999999999999999999999999999998876 89999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||.|||+.|++|+||+|+||+++.+ .+++ +|||......... ....+..++..|.|||...+. .
T Consensus 120 ~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l--~d~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~ 195 (286)
T cd06614 120 YVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKL--ADFGFAAQLTKEK--SKRNSVVGTPYWMAPEVIKRKDYGP 195 (286)
T ss_pred HHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEE--Cccchhhhhccch--hhhccccCCcccCCHhHhcCCCCCC
Confidence 999999999999999999999999999999864 4444 5888765433221 111233456789999987655 6
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ |++|+++|++ +..||..
T Consensus 196 ~~Dv-~slGvil~~l~~g~~p~~~ 218 (286)
T cd06614 196 KVDI-WSLGIMCIEMAEGEPPYLR 218 (286)
T ss_pred cccc-HHHHHHHHHHHhCCCCCCC
Confidence 7899 9999999999 6677763
No 277
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.89 E-value=2.5e-23 Score=212.65 Aligned_cols=174 Identities=24% Similarity=0.316 Sum_probs=135.9
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-------- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-------- 73 (477)
+++.||+|+++.... ....+.+.+|+.+|.++. ||||+++++++..++..++||||+++|+|.+++.+.+
T Consensus 66 ~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~ 144 (401)
T cd05107 66 STMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYL 144 (401)
T ss_pred CceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhc
Confidence 456899999976532 333457889999999997 9999999999999999999999999999999996531
Q ss_pred --------------------------------------------------------------------------------
Q psy6508 74 -------------------------------------------------------------------------------- 73 (477)
Q Consensus 74 -------------------------------------------------------------------------------- 73 (477)
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (401)
T cd05107 145 DKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERT 224 (401)
T ss_pred ccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCc
Confidence
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEE
Q psy6508 74 ----------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVI 143 (477)
Q Consensus 74 ----------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~ 143 (477)
.+++..+..++.|++.||.|||++|++||||||+|||++.+. .+.+.|||++.............+..+
T Consensus 225 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~-~~kL~DfGla~~~~~~~~~~~~~~~~~ 303 (401)
T cd05107 225 RRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGK-LVKICDFGLARDIMRDSNYISKGSTFL 303 (401)
T ss_pred chhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCC-EEEEEecCcceecccccccccCCCcCC
Confidence 256677889999999999999999999999999999997643 344569998764321111111223345
Q ss_pred eccccccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 144 CSVFEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 144 ~~~y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
+..|+|||...+. .++|+ |++|++++|+ +..||..
T Consensus 304 ~~~y~aPE~~~~~~~~~~~Dv-wslGvil~e~l~~g~~P~~~ 344 (401)
T cd05107 304 PLKWMAPESIFNNLYTTLSDV-WSFGILLWEIFTLGGTPYPE 344 (401)
T ss_pred CCceeChHHhcCCCCCcHhHH-HHHHHHHHHHHHcCCCCCCC
Confidence 6679999988655 67899 9999999997 3466653
No 278
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.89 E-value=4.7e-24 Score=207.02 Aligned_cols=172 Identities=22% Similarity=0.343 Sum_probs=140.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC---CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH---HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
.+++.||+|.++... .....+++.+|+.++++++ |||++++++++..+...|++|||++|++|.+++.. +.+++.
T Consensus 24 ~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~ 101 (277)
T cd06917 24 PTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA-GPIAEK 101 (277)
T ss_pred CCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc-cCCCHH
Confidence 478899999987543 2334567889999999996 99999999999999999999999999999999876 479999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||+.|++|+||+|+||++++++ ++.+.|||.+....... .......++..|+|||...+.
T Consensus 102 ~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~ 178 (277)
T cd06917 102 YISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG-NVKLCDFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKY 178 (277)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC-CEEEccCCceeecCCCc--cccccccCCcceeCHHHhccCCc
Confidence 9999999999999999999999999999999998642 34456999876543221 112334567789999987543
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||..
T Consensus 179 ~~~~~Dv-~slG~~l~~ll~g~~p~~~ 204 (277)
T cd06917 179 YDTKADI-WSLGITIYEMATGNPPYSD 204 (277)
T ss_pred cccchhH-HHHHHHHHHHHhCCCCCCC
Confidence 57899 9999999999 6788864
No 279
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.89 E-value=2.1e-24 Score=207.80 Aligned_cols=171 Identities=23% Similarity=0.298 Sum_probs=141.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
.+++.||+|.+..... ....+++.+|+.++++++||||+++++.+..++..++++||+++++|.+++... ..+++..+
T Consensus 24 ~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 102 (265)
T cd06605 24 PTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERIL 102 (265)
T ss_pred CCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHH
Confidence 4688999999876543 345577899999999999999999999999999999999999999999999876 67999999
Q ss_pred HHHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
..++.|++.||.|||+ .|++|+||||+||+++++. .+.+.|||.+...... ......++..|+|||...+.
T Consensus 103 ~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~-~~~l~d~g~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~ 177 (265)
T cd06605 103 GKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG-QIKLCDFGVSGQLVNS----LAKTFVGTSSYMAPERIQGNDYS 177 (265)
T ss_pred HHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC-CEEEeecccchhhHHH----HhhcccCChhccCHHHHcCCCCC
Confidence 9999999999999999 9999999999999998743 3444599987543221 11124566789999987665
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 178 ~~~Dv-~slG~~l~~l~~g~~p~~~ 201 (265)
T cd06605 178 VKSDI-WSLGLSLIELATGRFPYPP 201 (265)
T ss_pred chhhH-HHHHHHHHHHHhCCCCCCc
Confidence 67899 9999999999 5677764
No 280
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.89 E-value=3.2e-23 Score=199.52 Aligned_cols=175 Identities=22% Similarity=0.314 Sum_probs=142.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC---CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH---EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---~~l~~~ 78 (477)
.++..||+|++....... ..+.+.+|+.+++.++||||+++++.+...+..|++||+++|++|.+++... ..+++.
T Consensus 24 ~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~ 102 (267)
T cd06610 24 PNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEA 102 (267)
T ss_pred CCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHH
Confidence 367889999987665444 5677999999999999999999999999999999999999999999999764 358999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc--ccCCeEEEeccccccccCCCC
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI--EQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~--~~g~t~v~~~~y~ppE~~~~~ 156 (477)
.+..++.|++.||.|||++|++||||+|+||+++++. .+.++|||.+......... .......++..|+|||.....
T Consensus 103 ~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~ 181 (267)
T cd06610 103 IIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG-SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQV 181 (267)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC-CEEEcccchHHHhccCccccccccccccCChhhcChHHHccc
Confidence 9999999999999999999999999999999998653 3445599987543322111 122344667789999986543
Q ss_pred ----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 182 ~~~~~~~Dv-~slG~i~~~l~~g~~p~~~ 209 (267)
T cd06610 182 HGYDFKADI-WSFGITAIELATGAAPYSK 209 (267)
T ss_pred cCcCcccch-HhHhHHHHHHHhCCCCccc
Confidence 66899 9999999999 6677754
No 281
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.89 E-value=1.3e-23 Score=199.62 Aligned_cols=162 Identities=18% Similarity=0.307 Sum_probs=131.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.++... .+.+|...+....||||+++++.+...+..|++|||++|++|.+++.+...+++..+.
T Consensus 16 ~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~ 88 (237)
T cd05576 16 RTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVK 88 (237)
T ss_pred cCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHH
Confidence 578999999987643 1234555556667999999999999999999999999999999999887789999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
.++.|++.||.|||++|++||||||+||+++.+ .+++ .|||.+....... .+...+..|+|||...+. .
T Consensus 89 ~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l--~df~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~ 161 (237)
T cd05576 89 RWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQL--TYFSRWSEVEDSC-----DGEAVENMYCAPEVGGISEETE 161 (237)
T ss_pred HHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEE--ecccchhcccccc-----ccCCcCccccCCcccCCCCCCc
Confidence 999999999999999999999999999999764 4444 5888764433221 223345679999987654 6
Q ss_pred cccccCcceEEEEEE--eeeccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
++|+ |++|+++|++ +..||.
T Consensus 162 ~~Dv-wslG~il~el~~g~~~~~ 183 (237)
T cd05576 162 ACDW-WSLGAILFELLTGKTLVE 183 (237)
T ss_pred hhhH-HHHHHHHHHHHHCcchhh
Confidence 7899 9999999998 656554
No 282
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.89 E-value=3.3e-23 Score=198.28 Aligned_cols=171 Identities=24% Similarity=0.371 Sum_probs=138.7
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCC--CCHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEK--LSEFQCQ 81 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~--l~~~~~~ 81 (477)
+..||+|.++.... ....+.+.+|+.+++.++||||+++++.+...+..|++|||+++++|.+++..... +++..+.
T Consensus 28 ~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~ 106 (258)
T smart00219 28 EVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLL 106 (258)
T ss_pred CceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHH
Confidence 58899999865532 23567899999999999999999999999999999999999999999999987544 9999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++++. .+.++|||.+............ ...++..|+|||...+. .+
T Consensus 107 ~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~ 184 (258)
T smart00219 107 SFALQIARGMEYLESKNFIHRDLAARNCLVGENL-VVKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSK 184 (258)
T ss_pred HHHHHHHHHHHHHhcCCeeecccccceEEEccCC-eEEEcccCCceecccccccccc-cCCCcccccChHHhccCCCCcc
Confidence 9999999999999999999999999999998764 4444599987654432221111 11245679999987544 77
Q ss_pred ccccCcceEEEEEE---eeeccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~ 178 (477)
+|+ |++|++++++ +..||.
T Consensus 185 ~Di-~slG~i~~~l~~~g~~p~~ 206 (258)
T smart00219 185 SDV-WSFGVLLWEIFTLGESPYP 206 (258)
T ss_pred hhH-HHHHHHHHHHHhCCCCCCC
Confidence 899 9999999988 456665
No 283
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.89 E-value=7.1e-24 Score=202.56 Aligned_cols=174 Identities=29% Similarity=0.408 Sum_probs=145.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----CCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH----EKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----~~l~~ 77 (477)
++++.|++|++..........+.+.+|+++++.++|||++++++.+..+...++++||+++++|.+++... ..+++
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 102 (258)
T cd08215 23 SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPE 102 (258)
T ss_pred CCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCH
Confidence 46889999999877665566778999999999999999999999999999999999999999999999764 57999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
..+..++.|++.||.|||++|++|+||+|+||+++++. .+.+.|||.+....... ....+..+++.|+|||...+.
T Consensus 103 ~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~-~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~ 179 (258)
T cd08215 103 EQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG-LVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKP 179 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC-cEEECCccceeecccCc--ceecceeeeecccChhHhccCC
Confidence 99999999999999999999999999999999998642 33445888876543322 223445677889999987655
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 180 ~~~~~Dv-~slG~~~~~l~~g~~p~~~ 205 (258)
T cd08215 180 YNYKSDI-WSLGCVLYELCTLKHPFEG 205 (258)
T ss_pred CCccccH-HHHHHHHHHHHcCCCCCCC
Confidence 67899 9999999998 5566653
No 284
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.89 E-value=6.1e-24 Score=206.97 Aligned_cols=171 Identities=30% Similarity=0.435 Sum_probs=136.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~~ 80 (477)
.+|+.||+|.++...........+.+|+.++++++||||+++++++.+.+..|+++||++ ++|.+++.. .+.+++..+
T Consensus 23 ~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~ 101 (284)
T cd07839 23 ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIV 101 (284)
T ss_pred CCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCCCCCHHHH
Confidence 478899999997654444344567889999999999999999999999999999999997 688888765 457999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.++.||++||.|||++|++||||||+||+++.++ ++.+.|||.+....... .......++..|+|||...+.
T Consensus 102 ~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ 178 (284)
T cd07839 102 KSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG-ELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYS 178 (284)
T ss_pred HHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC-cEEECccchhhccCCCC--CCcCCCccccCCcChHHHhCCcccC
Confidence 99999999999999999999999999999997642 33445999875432111 111234567789999987553
Q ss_pred CcccccCcceEEEEEE--eeecc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPF 177 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf 177 (477)
.++|+ ||+|+++|+| +..||
T Consensus 179 ~~~Di-wslG~il~~l~tg~~p~ 200 (284)
T cd07839 179 TSIDM-WSAGCIFAELANAGRPL 200 (284)
T ss_pred cHHHH-HHHHHHHHHHHhcCCCC
Confidence 56899 9999999999 44444
No 285
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.89 E-value=2.9e-23 Score=203.93 Aligned_cols=168 Identities=26% Similarity=0.348 Sum_probs=131.8
Q ss_pred EEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-----------
Q psy6508 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE----------- 73 (477)
Q Consensus 6 ~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----------- 73 (477)
.+++|.++.. ......+.+.+|+.+++++ +||||+++++++...+.+|++|||+++++|.+++.+..
T Consensus 31 ~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 109 (297)
T cd05089 31 NAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKE 109 (297)
T ss_pred eeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccc
Confidence 4788887632 2334456789999999999 79999999999999999999999999999999997532
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccc
Q psy6508 74 -----KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFE 148 (477)
Q Consensus 74 -----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ 148 (477)
.+++..++.++.|++.||+|||++|++||||||+||+++.+. ...+.|||++........ ......+..|+
T Consensus 110 ~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~-~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~ 185 (297)
T cd05089 110 HGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENL-ASKIADFGLSRGEEVYVK---KTMGRLPVRWM 185 (297)
T ss_pred cCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCC-eEEECCcCCCccccceec---cCCCCcCcccc
Confidence 478899999999999999999999999999999999997653 334459998753321110 01111234699
Q ss_pred ccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 149 PREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 149 ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|||...+. .++|+ ||+|+++||| +..||..
T Consensus 186 aPE~~~~~~~~~~~Dv-wSlG~il~el~t~g~~pf~~ 221 (297)
T cd05089 186 AIESLNYSVYTTKSDV-WSFGVLLWEIVSLGGTPYCG 221 (297)
T ss_pred CchhhccCCCCchhhH-HHHHHHHHHHHcCCCCCCCC
Confidence 99987655 67899 9999999998 4467753
No 286
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.89 E-value=6.8e-24 Score=206.74 Aligned_cols=173 Identities=20% Similarity=0.311 Sum_probs=141.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++++.||+|.+..........+.+.+|+.+++.++||||+++++++..++..|+++||+++++|..+......+++..+.
T Consensus 24 ~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~ 103 (286)
T cd07846 24 ETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVR 103 (286)
T ss_pred CCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHH
Confidence 46889999998765544444567889999999999999999999999999999999999999998887766679999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK----T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~----~ 157 (477)
.++.|++.||.|||++|++||||+|+||+++++. .+.+.|||.+........ ......++..|+|||...+. .
T Consensus 104 ~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~-~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~ 180 (286)
T cd07846 104 KYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG-VVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGR 180 (286)
T ss_pred HHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC-cEEEEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCc
Confidence 9999999999999999999999999999997653 344459998765433221 11234567789999987643 5
Q ss_pred cccccCcceEEEEEE--eeeccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
++|+ ||+|++++++ +..||.
T Consensus 181 ~~Dv-~slG~~l~el~~g~~~~~ 202 (286)
T cd07846 181 AVDI-WAVGCLVTEMLTGEPLFP 202 (286)
T ss_pred hHhH-HHHHHHHHHHHcCCCCCC
Confidence 6899 9999999999 545554
No 287
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.89 E-value=4.6e-24 Score=205.09 Aligned_cols=172 Identities=24% Similarity=0.335 Sum_probs=137.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
++++.||||.+...... .+++.+|+.++++++||||+++++++..+...+++|||+++++|.+++.... .+++..
T Consensus 28 ~~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~ 104 (261)
T cd05034 28 NGTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQ 104 (261)
T ss_pred cCCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHH
Confidence 34577999998765433 3568899999999999999999999998899999999999999999997643 689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.|+.|||++|++|+||||+||+++++. .+...|||.+........ ........+..|.|||...+.
T Consensus 105 ~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~-~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~ 182 (261)
T cd05034 105 LVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL-VCKIADFGLARLIEDDEY-TAREGAKFPIKWTAPEAANYGRFT 182 (261)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC-CEEECccccceeccchhh-hhhhccCCCccccCHHHhccCCcC
Confidence 999999999999999999999999999999997652 334459998754332111 111122234579999988765
Q ss_pred CcccccCcceEEEEEE---eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||.+
T Consensus 183 ~~~Di-~slG~il~~l~t~g~~p~~~ 207 (261)
T cd05034 183 IKSDV-WSFGILLTEIVTYGRVPYPG 207 (261)
T ss_pred chhHH-HHHHHHHHHHHhCCCCCCCC
Confidence 67899 9999999987 5677754
No 288
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.89 E-value=4.3e-24 Score=205.07 Aligned_cols=175 Identities=29% Similarity=0.454 Sum_probs=142.1
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.|++|.+...... ....+.+.+|+.++++++||||+++++.+..+...|+++||++|++|.+++.+.+.+++..+
T Consensus 16 ~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 95 (265)
T cd05579 16 STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVA 95 (265)
T ss_pred CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHH
Confidence 46899999998765432 34557799999999999999999999999999999999999999999999988778999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCccc------ccCCeEEEeccccccccC
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYI------EQGNTKVICSVFEPREIP 153 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~------~~g~t~v~~~~y~ppE~~ 153 (477)
..++.|++.||.|||++|++||||+|+||+++++ .+++ .|||.+......... .......+...|.|||..
T Consensus 96 ~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l--~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~ 173 (265)
T cd05579 96 RIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKL--TDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVI 173 (265)
T ss_pred HHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEE--EecccchhcccCcccccccccccccCcccCccccCHHHh
Confidence 9999999999999999999999999999999764 4444 589887543221110 011223455679999987
Q ss_pred CCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 154 SSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 154 ~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.+. .++|+ |++|++++++ +..||..
T Consensus 174 ~~~~~~~~~Dv-~slG~~~~~l~~g~~p~~~ 203 (265)
T cd05579 174 LGQGHSKTVDW-WSLGCILYEFLVGIPPFHG 203 (265)
T ss_pred cCCCCCcchhh-HHHHHHHHHHHhCCCCCCC
Confidence 655 57899 9999999999 6677753
No 289
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.89 E-value=2.5e-23 Score=201.37 Aligned_cols=168 Identities=24% Similarity=0.336 Sum_probs=132.5
Q ss_pred EEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-----------
Q psy6508 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE----------- 73 (477)
Q Consensus 6 ~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----------- 73 (477)
.+++|.++... .....+.+.+|+.+++++ +||||+++++++...+.+|++|||+++++|.+++....
T Consensus 24 ~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 102 (270)
T cd05047 24 DAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 102 (270)
T ss_pred EEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccc
Confidence 46888876432 334456789999999999 89999999999999999999999999999999997542
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccc
Q psy6508 74 -----KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFE 148 (477)
Q Consensus 74 -----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ 148 (477)
.+++..++.++.|++.||+|||++|++||||||+||+++.+. ++...|||++...... ........+..|+
T Consensus 103 ~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~-~~kl~dfgl~~~~~~~---~~~~~~~~~~~y~ 178 (270)
T cd05047 103 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY-VAKIADFGLSRGQEVY---VKKTMGRLPVRWM 178 (270)
T ss_pred cCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCC-eEEECCCCCccccchh---hhccCCCCccccC
Confidence 378899999999999999999999999999999999997643 3445699987532211 1111122244699
Q ss_pred ccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 149 PREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 149 ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
|||..... .++|+ ||+|++++|+ +..||.+
T Consensus 179 apE~~~~~~~~~~~Di-~slG~il~el~~~g~~pf~~ 214 (270)
T cd05047 179 AIESLNYSVYTTNSDV-WSYGVLLWEIVSLGGTPYCG 214 (270)
T ss_pred ChHHHccCCCCchhhH-HHHHHHHHHHHcCCCCCccc
Confidence 99987655 67899 9999999998 4567753
No 290
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.89 E-value=3.8e-23 Score=198.00 Aligned_cols=173 Identities=22% Similarity=0.328 Sum_probs=142.1
Q ss_pred CCCcEEEEEEcccCCC---ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKV---SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
++++.|++|.+..... .++..+.+.+|+.+++.++||||+++++++.....+|+++||++|++|.+++.+.+.+++.
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 102 (258)
T cd06632 23 DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEP 102 (258)
T ss_pred CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHH
Confidence 3788999999866542 2345578999999999999999999999999999999999999999999999887779999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||+.|++|+||+|+||+++.+. .+.+.|||.+....... ...+..++..|+|||.....
T Consensus 103 ~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~-~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~ 178 (258)
T cd06632 103 VIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG-VVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGG 178 (258)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-CEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCC
Confidence 9999999999999999999999999999999997643 34445998876543221 12334566779999976543
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 179 ~~~~~D~-~slG~~l~~l~~g~~pf~~ 204 (258)
T cd06632 179 YGLAADI-WSLGCTVLEMATGKPPWSQ 204 (258)
T ss_pred CCchhhh-HHHHHHHHHHHhCCCCccc
Confidence 56899 9999999999 6677754
No 291
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.89 E-value=3.2e-23 Score=198.74 Aligned_cols=167 Identities=22% Similarity=0.371 Sum_probs=136.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~~ 80 (477)
.|+.||+|.++.... ..+++.+|+.+++.++||||+++++++...+..+++|||+++++|.+++.... .+++..+
T Consensus 28 ~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~ 104 (256)
T cd05039 28 RGQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQ 104 (256)
T ss_pred cCcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHH
Confidence 478899999875532 45678999999999999999999999998999999999999999999998765 6899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++|++||||||+||+++.+. ++.+.|||.+....... ........|.|||..... .
T Consensus 105 ~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~-~~~l~d~g~~~~~~~~~-----~~~~~~~~~~ape~~~~~~~~~ 178 (256)
T cd05039 105 LGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL-VAKVSDFGLAKEASQGQ-----DSGKLPVKWTAPEALREKKFST 178 (256)
T ss_pred HHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC-CEEEccccccccccccc-----ccCCCcccccCchhhcCCcCCc
Confidence 99999999999999999999999999999997653 33445999876542211 112223469999987654 5
Q ss_pred cccccCcceEEEEEE---eeecccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
++|+ ||+|++++++ +..||..
T Consensus 179 ~~Di-~slG~il~~l~~~g~~p~~~ 202 (256)
T cd05039 179 KSDV-WSFGILLWEIYSFGRVPYPR 202 (256)
T ss_pred HHHH-HHHHHHHHHHHhcCCCCCCC
Confidence 6899 9999999987 5567653
No 292
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.89 E-value=3.2e-24 Score=210.88 Aligned_cols=170 Identities=22% Similarity=0.345 Sum_probs=139.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.+..++..|+++||+++++|.+++.. ..+++..+.
T Consensus 44 ~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~ 120 (297)
T cd06659 44 HSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIA 120 (297)
T ss_pred CCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHH
Confidence 3688999999865432 2345688999999999999999999999999999999999999999998765 568999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+....... .......++..|.|||...+. .+
T Consensus 121 ~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~-~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~ 197 (297)
T cd06659 121 TVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG-RVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRTPYGTE 197 (297)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC-cEEEeechhHhhccccc--ccccceecCccccCHHHHccCCCCch
Confidence 9999999999999999999999999999997643 34456999875332111 112345677789999988664 67
Q ss_pred ccccCcceEEEEEE--eeeccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~ 178 (477)
+|+ |++|++++|+ +..||.
T Consensus 198 ~Dv-~slG~il~el~~g~~p~~ 218 (297)
T cd06659 198 VDI-WSLGIMVIEMVDGEPPYF 218 (297)
T ss_pred hhH-HHHHHHHHHHHhCCCCCC
Confidence 899 9999999999 667775
No 293
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.89 E-value=6e-24 Score=205.39 Aligned_cols=171 Identities=24% Similarity=0.370 Sum_probs=136.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCC------eEEEEEecCCCCCHHHHHHh---
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDER------YVYIILEYCDGGDLCSFIRS--- 71 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~------~~~lv~e~~~g~sL~~~l~~--- 71 (477)
.+++.|++|++..... ..+.+.+|+.+++++ +||||+++++++.... .+|++|||+++++|.+++..
T Consensus 29 ~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~ 105 (275)
T cd06608 29 KTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRK 105 (275)
T ss_pred CCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhh
Confidence 4678899999875532 345788999999999 7999999999987644 48999999999999999865
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccc
Q psy6508 72 -HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150 (477)
Q Consensus 72 -~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~pp 150 (477)
...+++..+..++.|++.||.|||++|++|+||+|+||+++.+. ++.++|||.+....... .......++..|+||
T Consensus 106 ~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~-~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aP 182 (275)
T cd06608 106 KGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA-EVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAP 182 (275)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCC-eEEECCCccceecccch--hhhcCccccccccCH
Confidence 34789999999999999999999999999999999999997642 34445999875443221 122345577789999
Q ss_pred ccCCCC--------CcccccCcceEEEEEE--eeecccc
Q psy6508 151 EIPSSK--------TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 151 E~~~~~--------~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
|..... .++|+ |++|++++++ +..||..
T Consensus 183 E~~~~~~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~ 220 (275)
T cd06608 183 EVIACDEQPDASYDARSDV-WSLGITAIELADGKPPLCD 220 (275)
T ss_pred hHhcccccccCCccccccH-HHhHHHHHHHHhCCCCccc
Confidence 986432 46899 9999999999 6778764
No 294
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.89 E-value=4e-23 Score=202.02 Aligned_cols=174 Identities=21% Similarity=0.339 Sum_probs=141.0
Q ss_pred CCCcEEEEEEcccCCCC--hhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVS--ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
++|+.||+|+++..... ....+.+.+|+.+++++ +||||+++++.++.+...|+||||+++++|.+++...+.+++.
T Consensus 26 ~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~ 105 (290)
T cd05613 26 DSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQ 105 (290)
T ss_pred CCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHH
Confidence 36889999998764322 22346688999999999 6999999999999999999999999999999999887789999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++|++||||+|+||+++.+. ++.+.|||++........ .......++..|+|||...+.
T Consensus 106 ~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~ 183 (290)
T cd05613 106 EVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG-HVVLTDFGLSKEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDG 183 (290)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC-CEEEeeCccceecccccc-cccccccCCcccCChhhccCCCC
Confidence 9999999999999999999999999999999997643 455569998765432211 111234566789999987642
Q ss_pred ---CcccccCcceEEEEEE--eeeccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|+++|++ +..||.
T Consensus 184 ~~~~~~Dv-~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 184 GHDKAVDW-WSMGVLMYELLTGASPFT 209 (290)
T ss_pred CCCccccH-HHHHHHHHHHhcCCCCCC
Confidence 56899 9999999999 556765
No 295
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.89 E-value=3.3e-23 Score=198.63 Aligned_cols=163 Identities=17% Similarity=0.206 Sum_probs=131.8
Q ss_pred EEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHH
Q psy6508 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFV 84 (477)
Q Consensus 6 ~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~~i~ 84 (477)
.|++|.+..... ....+.+|+.+++.++||||+++++++.. ...++||||+++++|.+++...+ .++...+..++
T Consensus 32 ~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 107 (259)
T cd05037 32 SVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVA 107 (259)
T ss_pred eeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHH
Confidence 577887654431 15678899999999999999999999887 77899999999999999998765 68999999999
Q ss_pred HHHHHHHHHHHhCCcEEccCCCCceeeccCc------ceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 85 RQLVLALKFLRENNVCHFDLKPQNILIKNNT------LKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 85 ~qi~~aL~~LH~~givHrDlkp~NIll~~~~------~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.|++.||.|||++||+||||||+||+++.+. ..+..+|||.+..... .....+...|.|||...+.
T Consensus 108 ~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~ 181 (259)
T cd05037 108 KQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQA 181 (259)
T ss_pred HHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCC
Confidence 9999999999999999999999999997644 2355569998754332 2234455679999987543
Q ss_pred ---CcccccCcceEEEEEE---eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||..
T Consensus 182 ~~~~~~Di-~slG~~~~~l~~~~~~p~~~ 209 (259)
T cd05037 182 SLTIAADK-WSFGTTLLEICSNGEEPLST 209 (259)
T ss_pred CcchhhHH-HHHHHHHHHHHhCCCCCccc
Confidence 56899 9999999998 3466654
No 296
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.89 E-value=8.6e-23 Score=194.92 Aligned_cols=174 Identities=29% Similarity=0.375 Sum_probs=145.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.|++|.+......+...+.+.+|+.++++++|||++++++++..++..+++|||+++++|.+++.....+++..+.
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~ 102 (254)
T cd06627 23 ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVA 102 (254)
T ss_pred CCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHH
Confidence 46789999999887665566778999999999999999999999999999999999999999999999887889999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||+|+||+++.+. .+.+.|||.+........ ......++..|.|||...+. .+
T Consensus 103 ~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~-~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~ 179 (254)
T cd06627 103 VYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG-VVKLADFGVATKLNDVSK--DDASVVGTPYWMAPEVIEMSGASTA 179 (254)
T ss_pred HHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC-CEEEeccccceecCCCcc--cccccccchhhcCHhhhcCCCCCcc
Confidence 9999999999999999999999999999998642 344459998765443221 12234567789999987655 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|++++++ +..||..
T Consensus 180 ~Dv-~~lG~~l~~l~~g~~p~~~ 201 (254)
T cd06627 180 SDI-WSLGCTVIELLTGNPPYYD 201 (254)
T ss_pred hhH-HHHHHHHHHHHhCCCCCCC
Confidence 899 9999999999 5667753
No 297
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.89 E-value=2.1e-23 Score=206.65 Aligned_cols=171 Identities=22% Similarity=0.367 Sum_probs=134.2
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe--CCeEEEEEecCCCCCHHHHHHhC--------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSH-------- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv~e~~~g~sL~~~l~~~-------- 72 (477)
+++.||+|.+...... ..+.+|+.++++++||||+++++++.. +...|++|||++ ++|.+++...
T Consensus 27 ~~~~~a~k~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~ 101 (317)
T cd07867 27 DEKEYALKQIEGTGIS----MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKK 101 (317)
T ss_pred ccceEEEEEecCCCCc----HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCC
Confidence 5678999998655322 346789999999999999999998853 567899999997 6888887532
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc---CcceeecccccceecccCCcc-cccCCeEEEeccc
Q psy6508 73 -EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLAGLKQGVSEKAKGSAY-IEQGNTKVICSVF 147 (477)
Q Consensus 73 -~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~---~~~rl~~~dfG~~~~~~gs~~-~~~g~t~v~~~~y 147 (477)
..+++..+..++.|++.||.|||++||+||||||+||++.. ...++.++|||.+........ .....+..++..|
T Consensus 102 ~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y 181 (317)
T cd07867 102 PMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 181 (317)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccc
Confidence 24889999999999999999999999999999999999942 233455669999865432211 1122345778899
Q ss_pred cccccCCCC----CcccccCcceEEEEEE--eeecccc
Q psy6508 148 EPREIPSSK----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 148 ~ppE~~~~~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|||...+. .++|+ ||+|+++||+ +..||..
T Consensus 182 ~aPE~~~~~~~~~~~~Di-wSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 182 RAPELLLGARHYTKAIDI-WAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCcHHhcCCCccCcHHHH-HhHHHHHHHHHhCCCCccc
Confidence 999987653 56899 9999999999 6678864
No 298
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.89 E-value=4.8e-23 Score=197.77 Aligned_cols=174 Identities=28% Similarity=0.386 Sum_probs=143.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe--CCeEEEEEecCCCCCHHHHHHh----CCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRS----HEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv~e~~~g~sL~~~l~~----~~~l 75 (477)
.+|+.||+|.++.........+++.+|+.+++.++||||+++++.+.. ....|++|||+++++|.+++.. ..++
T Consensus 23 ~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l 102 (265)
T cd08217 23 SDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYI 102 (265)
T ss_pred CCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCC
Confidence 467899999998776666667789999999999999999999998753 4578999999999999999976 3578
Q ss_pred CHHHHHHHHHHHHHHHHHHH-----hCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccc
Q psy6508 76 SEFQCQQFVRQLVLALKFLR-----ENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH-----~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~pp 150 (477)
++..++.++.|++.||.||| +.+++|+||||+||+++++. ++.+.|||.+........ ...+..++..|+||
T Consensus 103 ~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~-~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~p 179 (265)
T cd08217 103 EEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN-NVKLGDFGLAKILGHDSS--FAKTYVGTPYYMSP 179 (265)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCC-CEEEecccccccccCCcc--cccccccCCCccCh
Confidence 99999999999999999999 89999999999999998642 344459998765443221 12345678889999
Q ss_pred ccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 151 EIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 151 E~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
|...+. .++|+ |++|++++++ +..||..
T Consensus 180 E~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 180 EQLNHMSYDEKSDI-WSLGCLIYELCALSPPFTA 212 (265)
T ss_pred hhhcCCCCCchhHH-HHHHHHHHHHHHCCCcccC
Confidence 998765 56899 9999999999 6677764
No 299
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.89 E-value=1.1e-23 Score=206.43 Aligned_cols=174 Identities=25% Similarity=0.332 Sum_probs=136.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCe-----EEEEEecCCCCCHHHHHHhC---
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERY-----VYIILEYCDGGDLCSFIRSH--- 72 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~-----~~lv~e~~~g~sL~~~l~~~--- 72 (477)
.+|+.||+|.++...........+.+|+.+++.+ +||||+++++++...+. .|++|||++ ++|.+++...
T Consensus 24 ~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~ 102 (295)
T cd07837 24 NTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLD-SDLKKFMDSNGRG 102 (295)
T ss_pred CCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccC-cCHHHHHHHhccc
Confidence 4788999999876544333446788999999999 56999999999876655 899999998 5899988653
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccc
Q psy6508 73 --EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150 (477)
Q Consensus 73 --~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~pp 150 (477)
..+++..++.++.|++.||.|||++|++||||||+||+++.+...+.+.|||.+...... .........++.|.||
T Consensus 103 ~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~~~aP 180 (295)
T cd07837 103 PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIP--VKSYTHEIVTLWYRAP 180 (295)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCC--ccccCCcccccCCCCh
Confidence 357999999999999999999999999999999999999874345555699987543211 1111234567789999
Q ss_pred ccCCCC----CcccccCcceEEEEEE--eeecccc
Q psy6508 151 EIPSSK----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 151 E~~~~~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
|...+. .++|+ |++|+++|++ +..||.+
T Consensus 181 E~~~~~~~~~~~~Di-~slG~~l~~l~~g~~~~~~ 214 (295)
T cd07837 181 EVLLGSTHYSTPVDI-WSVGCIFAEMSRKQPLFPG 214 (295)
T ss_pred HHhhCCCCCCchHHH-HHHHHHHHHHHcCCCCCCC
Confidence 977543 67899 9999999998 6667753
No 300
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.89 E-value=6.3e-24 Score=206.75 Aligned_cols=173 Identities=26% Similarity=0.357 Sum_probs=140.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
.+|+.||+|++..........+.+.+|+.+++.++|||++++++++..++..|++|||++ ++|.+++.... .+++..
T Consensus 22 ~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~ 100 (283)
T cd07835 22 LTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPL 100 (283)
T ss_pred CCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHH
Confidence 478999999987665444444678899999999999999999999999999999999996 79999998765 689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++||||+|+||+++.+. .+.+.|||.+....... .......++..|+|||...+.
T Consensus 101 ~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~-~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~ 177 (283)
T cd07835 101 IKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG-ALKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGSRQY 177 (283)
T ss_pred HHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC-cEEEeecccccccCCCc--cccCccccccCCCCCceeecCccc
Confidence 999999999999999999999999999999997642 44556999875432111 111233557789999987543
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||..
T Consensus 178 ~~~~Di-~slG~~l~~l~~g~~pf~~ 202 (283)
T cd07835 178 STPVDI-WSIGCIFAEMVNRRPLFPG 202 (283)
T ss_pred CcHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 6677753
No 301
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.89 E-value=1.1e-23 Score=205.89 Aligned_cols=171 Identities=22% Similarity=0.349 Sum_probs=139.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.|++|+++... ....+.+.+|+.+++.++||||+++++++...+..++++||++|++|.+++.. +++++..+.
T Consensus 42 ~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~ 118 (285)
T cd06648 42 STGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIA 118 (285)
T ss_pred CCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHH
Confidence 467889999886442 33345688999999999999999999999999999999999999999999987 579999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||+|+||+++.+. .+.++|||......... .......++..|+|||...+. .+
T Consensus 119 ~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~ 195 (285)
T cd06648 119 TVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG-RVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPEVISRLPYGTE 195 (285)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC-cEEEcccccchhhccCC--cccccccCCccccCHHHhcCCCCCCc
Confidence 9999999999999999999999999999997643 34445888764332211 111234567789999998665 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|++++++ +..||..
T Consensus 196 ~Dv-~slGv~l~ell~g~~p~~~ 217 (285)
T cd06648 196 VDI-WSLGIMVIEMVDGEPPYFN 217 (285)
T ss_pred ccH-HHHHHHHHHHHhCCCCCcC
Confidence 899 9999999999 6677753
No 302
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.89 E-value=1.1e-23 Score=203.42 Aligned_cols=171 Identities=22% Similarity=0.294 Sum_probs=135.5
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQF 83 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i 83 (477)
..||+|.++... .....+.+.+|+.++++++||||+++++++...+..|++|||+++++|.+++... +.+++..+..+
T Consensus 34 ~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 112 (268)
T cd05063 34 VAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGM 112 (268)
T ss_pred eEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHH
Confidence 379999986543 3444567899999999999999999999999999999999999999999999764 47899999999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCC-eEEEeccccccccCCCC---Ccc
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGN-TKVICSVFEPREIPSSK---TSL 159 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~-t~v~~~~y~ppE~~~~~---~~~ 159 (477)
+.|++.||.|||++|++||||||+||+++.+. .+...|||.+............. .......|+|||..... .++
T Consensus 113 ~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~ 191 (268)
T cd05063 113 LRGIAAGMKYLSDMNYVHRDLAARNILVNSNL-ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSAS 191 (268)
T ss_pred HHHHHHHHHHHHHCCeeccccchhhEEEcCCC-cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHh
Confidence 99999999999999999999999999997643 34455999876543221111110 11122469999987654 678
Q ss_pred cccCcceEEEEEE---eeeccc
Q psy6508 160 EYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 160 Di~~s~G~il~e~---~~~Pf~ 178 (477)
|+ ||+|+++||+ +..||.
T Consensus 192 Dv-~slG~il~ell~~g~~p~~ 212 (268)
T cd05063 192 DV-WSFGIVMWEVMSFGERPYW 212 (268)
T ss_pred HH-HHHHHHHHHHHhCCCCCCC
Confidence 99 9999999995 566765
No 303
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.89 E-value=7.8e-24 Score=212.52 Aligned_cols=174 Identities=20% Similarity=0.298 Sum_probs=133.3
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEe-CCeEEEEEecCCCCCHHHHHHhC--------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWD-ERYVYIILEYCDGGDLCSFIRSH-------- 72 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~-~~~~~lv~e~~~g~sL~~~l~~~-------- 72 (477)
+++.||||+++... .......+.+|+.++.++ +||||+++++++.. +..++++|||+++|+|.+++...
T Consensus 36 ~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~ 114 (343)
T cd05103 36 TCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYK 114 (343)
T ss_pred cceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCcccccc
Confidence 57889999987543 233456788999999999 78999999998764 45789999999999999998642
Q ss_pred -----------------------------------------------------------CCCCHHHHHHHHHHHHHHHHH
Q psy6508 73 -----------------------------------------------------------EKLSEFQCQQFVRQLVLALKF 93 (477)
Q Consensus 73 -----------------------------------------------------------~~l~~~~~~~i~~qi~~aL~~ 93 (477)
..+++..+..++.|++.||.|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 194 (343)
T cd05103 115 TKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEF 194 (343)
T ss_pred ccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHH
Confidence 136777888999999999999
Q ss_pred HHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---CcccccCcceEEEE
Q psy6508 94 LRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYV 170 (477)
Q Consensus 94 LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~ 170 (477)
||++||+||||||+||+++.+. .+.++|||.+.............+..++..|+|||...+. .++|+ |++|++++
T Consensus 195 lH~~~i~H~dikp~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~ 272 (343)
T cd05103 195 LASRKCIHRDLAARNILLSENN-VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV-WSFGVLLW 272 (343)
T ss_pred HHhCCeecCCCccCeEEEcCCC-cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhH-HHHHHHHH
Confidence 9999999999999999997542 3444599987653222111111122334569999987655 67899 99999999
Q ss_pred EE---eeecccc
Q psy6508 171 EF---KFAPFAS 179 (477)
Q Consensus 171 e~---~~~Pf~~ 179 (477)
++ +..||..
T Consensus 273 el~~~g~~p~~~ 284 (343)
T cd05103 273 EIFSLGASPYPG 284 (343)
T ss_pred HHHHCCCCCCCC
Confidence 97 5567653
No 304
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.89 E-value=1.1e-23 Score=202.48 Aligned_cols=171 Identities=21% Similarity=0.312 Sum_probs=134.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
+++..||+|.+...... .+.+.+|+.++++++|||++++++++. ....|++|||+++++|.+++... ..+++..
T Consensus 28 ~~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 103 (260)
T cd05070 28 NGNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPN 103 (260)
T ss_pred cCCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHH
Confidence 35677999998765433 356889999999999999999999875 45689999999999999999763 3589999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||++|++||||||+||+++++. ++.+.|||.+......... ......+...|+|||...+.
T Consensus 104 ~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~-~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~ 181 (260)
T cd05070 104 LVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL-VCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFT 181 (260)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc-eEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCc
Confidence 999999999999999999999999999999998753 4555699988654322211 11112234469999987654
Q ss_pred CcccccCcceEEEEEE---eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||.+
T Consensus 182 ~~~Di-~slG~~l~~l~~~g~~p~~~ 206 (260)
T cd05070 182 IKSDV-WSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred chhhh-HHHHHHHHHHHhcCCCCCCC
Confidence 67899 9999999998 4567754
No 305
>KOG0983|consensus
Probab=99.89 E-value=5e-24 Score=195.30 Aligned_cols=211 Identities=18% Similarity=0.256 Sum_probs=158.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.+|...|||.+.+.. +.+..+++.+.+.++..- .+|+||+.+|+|..+..+++.||.+. ..+..++++ .+++|+..
T Consensus 115 s~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik~piPE~i 192 (391)
T KOG0983|consen 115 STGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TCAEKLLKRIKGPIPERI 192 (391)
T ss_pred ccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhcCCchHHh
Confidence 468899999997764 455567788888887766 49999999999999999999999985 666666655 35799999
Q ss_pred HHHHHHHHHHHHHHHHh-CCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 80 CQQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
+-++...+++||.||-+ +||+|||+||+|||+|+ +++++ ||||++.+...|. ......||+.||+||.+...
T Consensus 193 lGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKl--CDFGIsGrlvdSk---AhtrsAGC~~YMaPERidp~~ 267 (391)
T KOG0983|consen 193 LGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKL--CDFGISGRLVDSK---AHTRSAGCAAYMAPERIDPPD 267 (391)
T ss_pred hhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEe--ecccccceeeccc---ccccccCCccccCccccCCCC
Confidence 99999999999999976 59999999999999986 56665 5999997765543 22346799999999988655
Q ss_pred -----CcccccCcceEEEEEE--eeeccccccc------------cCC-C-CCcchHHHHHHHHHHhhhhh-hcccCCCC
Q psy6508 157 -----TSLEYQRSKGELYVEF--KFAPFASQIR------------TGW-L-RDSEEKELGNHLKRALEPAV-CRHEFSNF 214 (477)
Q Consensus 157 -----~~~Di~~s~G~il~e~--~~~Pf~~~~r------------~~~-~-~~~~~~~l~~~i~~~l~~~i-~~~~~Pr~ 214 (477)
..+|+ ||+|+.++|+ +..||.+... ++. + .......+..+++.++.... .+.+|+..
T Consensus 268 ~~kYDiRaDV-WSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~L 346 (391)
T KOG0983|consen 268 KPKYDIRADV-WSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKL 346 (391)
T ss_pred CCccchhhhh-hhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHH
Confidence 56899 9999999999 6788876321 111 1 11245566666666665554 24555554
Q ss_pred cccEEE
Q psy6508 215 QVDLFV 220 (477)
Q Consensus 215 ~i~i~v 220 (477)
.-.-++
T Consensus 347 l~h~Fi 352 (391)
T KOG0983|consen 347 LEHPFI 352 (391)
T ss_pred hcCcce
Confidence 444333
No 306
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.89 E-value=7.7e-23 Score=197.82 Aligned_cols=170 Identities=21% Similarity=0.316 Sum_probs=135.1
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQ 82 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~~ 82 (477)
...||||...... .....+.+.+|+.++++++||||+++++++.. +..|++|||+++++|.+++.+.. .+++..+..
T Consensus 34 ~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 111 (270)
T cd05056 34 KIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLIL 111 (270)
T ss_pred CcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHH
Confidence 3568999876543 24455789999999999999999999998875 45789999999999999998744 589999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
++.|++.||.|||++|++||||||+||+++.+ .+++ .|||.+....+...... ........|+|||..... .+
T Consensus 112 ~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l--~d~g~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~ 188 (270)
T cd05056 112 YSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKL--GDFGLSRYLEDESYYKA-SKGKLPIKWMAPESINFRRFTSA 188 (270)
T ss_pred HHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEE--ccCceeeecccccceec-CCCCccccccChhhhccCCCCch
Confidence 99999999999999999999999999999764 4444 49998765544322111 112233469999987654 67
Q ss_pred ccccCcceEEEEEE---eeecccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
+|+ ||+|++++++ +..||..
T Consensus 189 ~Di-~slG~il~el~~~g~~pf~~ 211 (270)
T cd05056 189 SDV-WMFGVCMWEILMLGVKPFQG 211 (270)
T ss_pred hhh-HHHHHHHHHHHHcCCCCCCC
Confidence 899 9999999995 6678864
No 307
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.89 E-value=1.3e-23 Score=203.23 Aligned_cols=170 Identities=24% Similarity=0.374 Sum_probs=136.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeC------CeEEEEEecCCCCCHHHHHHhC--
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDE------RYVYIILEYCDGGDLCSFIRSH-- 72 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~------~~~~lv~e~~~g~sL~~~l~~~-- 72 (477)
++++.||+|.+..... ....+.+|+.+++++ +||||+++++++... ...|++|||+++++|.+++...
T Consensus 29 ~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~ 105 (272)
T cd06637 29 KTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG 105 (272)
T ss_pred CCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccC
Confidence 4678999999875532 235678999999999 799999999998753 4689999999999999999864
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 73 EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 73 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
..+++..+..++.|++.||.|||++||+||||||+||+++.+. .+.++|||++...... .....+..++..|.|||.
T Consensus 106 ~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~-~~~l~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~ 182 (272)
T cd06637 106 NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA-EVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEV 182 (272)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCC-CEEEccCCCceecccc--cccCCcccccccccCHhH
Confidence 3689999999999999999999999999999999999998653 3445699987644321 122345567788999998
Q ss_pred CCCC--------CcccccCcceEEEEEE--eeeccc
Q psy6508 153 PSSK--------TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 153 ~~~~--------~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
..+. .++|+ ||+|++++|+ +..||.
T Consensus 183 ~~~~~~~~~~~~~~~Dv-~slGv~l~el~~g~~p~~ 217 (272)
T cd06637 183 IACDENPDATYDFKSDL-WSLGITAIEMAEGAPPLC 217 (272)
T ss_pred hccccCcCCCCCchhhH-HHHHHHHHHHHhCCCCcc
Confidence 7521 46899 9999999999 666765
No 308
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.89 E-value=6.3e-23 Score=197.30 Aligned_cols=173 Identities=19% Similarity=0.291 Sum_probs=132.8
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEE-eCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW-DERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
++..||||.+.... .....+.+.+|+.+++.++||||+++++++. .++..+++|||+.+++|.+++.+. ...++..+
T Consensus 22 ~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 100 (262)
T cd05058 22 QKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDL 100 (262)
T ss_pred ceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHH
Confidence 34679999875432 3344567889999999999999999999765 455689999999999999999764 34677888
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccc--cCCeEEEeccccccccCCCC--
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIE--QGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~--~g~t~v~~~~y~ppE~~~~~-- 156 (477)
..++.|++.||.|||+.|++||||||+||+++++. .+.+.|||.+.......... ......++..|+|||...+.
T Consensus 101 ~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 179 (262)
T cd05058 101 IGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF-TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKF 179 (262)
T ss_pred HHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC-cEEECCccccccccCCcceeecccccCcCCccccChhHhccCcc
Confidence 99999999999999999999999999999997653 34556999876443221111 11122334579999987654
Q ss_pred -CcccccCcceEEEEEE---eeeccc
Q psy6508 157 -TSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
.++|+ ||+|+++||+ +.+||.
T Consensus 180 ~~~~Di-~slG~~l~el~~~~~~~~~ 204 (262)
T cd05058 180 TTKSDV-WSFGVLLWELMTRGAPPYP 204 (262)
T ss_pred chHHHH-HHHHHHHHHHHcCCCCCCC
Confidence 67899 9999999998 345554
No 309
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.89 E-value=2.5e-23 Score=202.08 Aligned_cols=172 Identities=22% Similarity=0.308 Sum_probs=139.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.++.... ....+.+.+|+.++++++||||+++++.+..++..|+||||+++++|.+++.. +.+++..+.
T Consensus 27 ~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~ 104 (277)
T cd06642 27 RTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP-GPLEETYIA 104 (277)
T ss_pred CCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc-CCCCHHHHH
Confidence 4678899999875542 33456789999999999999999999999999999999999999999998865 478999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.|+.|||++|++|+||+|+||+++.+. .+...|||.+........ ......++..|.|||...+. .+
T Consensus 105 ~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~-~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~ 181 (277)
T cd06642 105 TILREILKGLDYLHSERKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDFK 181 (277)
T ss_pred HHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC-CEEEccccccccccCcch--hhhcccCcccccCHHHhCcCCCchh
Confidence 9999999999999999999999999999997643 234459998754332211 11223466789999998765 57
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|++++|+ +..||..
T Consensus 182 ~Dv-~slG~il~el~tg~~p~~~ 203 (277)
T cd06642 182 ADI-WSLGITAIELAKGEPPNSD 203 (277)
T ss_pred hhH-HHHHHHHHHHHhCCCCCcc
Confidence 899 9999999999 6677653
No 310
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.89 E-value=1.2e-23 Score=206.35 Aligned_cols=171 Identities=19% Similarity=0.328 Sum_probs=139.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+|+.||||++... .......+.+|+.+++.++||||+++++.+...+..|++|||+++++|.+++.. +.+++..++
T Consensus 43 ~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~ 119 (292)
T cd06657 43 SSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIA 119 (292)
T ss_pred CCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc-CCCCHHHHH
Confidence 47889999987543 233456789999999999999999999999999999999999999999998755 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||+|||++|++||||+|+||+++.+. .+...|||........ ........++..|+|||...+. .+
T Consensus 120 ~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~-~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~ 196 (292)
T cd06657 120 AVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKE--VPRRKSLVGTPYWMAPELISRLPYGPE 196 (292)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-CEEEcccccceecccc--cccccccccCccccCHHHhcCCCCCch
Confidence 9999999999999999999999999999998653 3445599876533211 1122334567789999987654 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|+++|++ +..||.+
T Consensus 197 ~Dv-~slGvil~el~tg~~p~~~ 218 (292)
T cd06657 197 VDI-WSLGIMVIEMVDGEPPYFN 218 (292)
T ss_pred hhH-HHHHHHHHHHHhCCCCCCC
Confidence 899 9999999999 5577764
No 311
>KOG0608|consensus
Probab=99.89 E-value=9.5e-24 Score=212.12 Aligned_cols=176 Identities=22% Similarity=0.373 Sum_probs=146.6
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
++...||+|.+.+... ..........|..||..-.++-||++|-.|++.+.+|+||+|++||++-.+|.+.+-|++..+
T Consensus 652 DT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LA 731 (1034)
T KOG0608|consen 652 DTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLA 731 (1034)
T ss_pred chhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHH
Confidence 4566788888876543 233445678899999999999999999999999999999999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-Ccceeecccccceecc---cCCcccccCC-----------------
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKA---KGSAYIEQGN----------------- 139 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~---~gs~~~~~g~----------------- 139 (477)
+.++.++..|+++.|.-|+|||||||+|||||. +.+++. |||++... ..+.|+..|+
T Consensus 732 RFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLT--DFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~ 809 (1034)
T KOG0608|consen 732 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLT--DFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADIS 809 (1034)
T ss_pred HHHHHHHHHHHHHHHhccceecccCccceEEccCCceeee--eccccccceeccccccccCCCccccccCCCchhhcccc
Confidence 999999999999999999999999999999986 456666 99988532 1222222111
Q ss_pred --------------------eEEEeccccccccCCCC---CcccccCcceEEEEEE--eeeccccc
Q psy6508 140 --------------------TKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 140 --------------------t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.-+||+.|.+||++... ...|+ |+.|+|+||| |..||...
T Consensus 810 ~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw-ws~gvil~em~~g~~pf~~~ 874 (1034)
T KOG0608|consen 810 KCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW-WSVGVILYEMLVGQPPFLAD 874 (1034)
T ss_pred ccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh-hHhhHHHHHHhhCCCCccCC
Confidence 45889999999998776 67899 9999999999 77888753
No 312
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.89 E-value=5.4e-23 Score=201.44 Aligned_cols=172 Identities=23% Similarity=0.319 Sum_probs=138.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCC-CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHE-KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~-~l~~~ 78 (477)
.+++.||+|.++...........+.+|+.++++++||||+++++++... +..|++|||++ ++|.+++.... .+++.
T Consensus 28 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~ 106 (293)
T cd07843 28 KTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFLQS 106 (293)
T ss_pred CCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccCCCCHH
Confidence 4688999999976654444445677899999999999999999998877 89999999998 69999987644 58999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.++.++.|++.||+|||++|++||||||+||+++.+. .+.++|||.+....... .......++..|+|||...+.
T Consensus 107 ~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~-~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~ 183 (293)
T cd07843 107 EVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG-ILKICDFGLAREYGSPL--KPYTQLVVTLWYRAPELLLGAKE 183 (293)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC-cEEEeecCceeeccCCc--cccccccccccccCchhhcCCcc
Confidence 9999999999999999999999999999999998653 33445999876543321 111234566789999987653
Q ss_pred --CcccccCcceEEEEEE--eeeccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ ||+|++++++ +..||.
T Consensus 184 ~~~~~Di-~slG~~l~~l~~g~~~f~ 208 (293)
T cd07843 184 YSTAIDM-WSVGCIFAELLTKKPLFP 208 (293)
T ss_pred ccchhhH-HHHHHHHHHHHhCCCCCC
Confidence 56899 9999999998 556665
No 313
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.89 E-value=2e-23 Score=203.31 Aligned_cols=170 Identities=21% Similarity=0.234 Sum_probs=131.3
Q ss_pred EEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHH
Q psy6508 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFV 84 (477)
Q Consensus 6 ~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i~ 84 (477)
.|++|.+.... ......++..|+..+++++||||+++++++. ....++++||+++|+|.+++... +.+++..+..|+
T Consensus 38 ~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~ 115 (279)
T cd05111 38 PVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWC 115 (279)
T ss_pred EEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHH
Confidence 57888875332 2344567888999999999999999999875 45678999999999999999764 468999999999
Q ss_pred HHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Ccccc
Q psy6508 85 RQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEY 161 (477)
Q Consensus 85 ~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di 161 (477)
.|++.||.|||++|++||||||+||+++.+. .+..+|||.+................++..|+|||...+. .++|+
T Consensus 116 ~qi~~~l~~lH~~~iiH~dlkp~nili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv 194 (279)
T cd05111 116 VQIAKGMYYLEEHRMVHRNLAARNILLKSDS-IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDV 194 (279)
T ss_pred HHHHHHHHHHHHCCEeccccCcceEEEcCCC-cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhH
Confidence 9999999999999999999999999997653 3445699988654322111111222344579999988654 67899
Q ss_pred cCcceEEEEEE---eeecccc
Q psy6508 162 QRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 162 ~~s~G~il~e~---~~~Pf~~ 179 (477)
||+|+++||+ +..||.+
T Consensus 195 -~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 195 -WSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred -HHHHHHHHHHHcCCCCCCCC
Confidence 9999999998 4556653
No 314
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.89 E-value=3e-23 Score=202.92 Aligned_cols=172 Identities=26% Similarity=0.352 Sum_probs=137.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
.+++.||||.+...... .....+.+|+.++++++||||+++++++..++..|+||||++ ++|.+++... ..+++..+
T Consensus 28 ~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~ 105 (291)
T cd07844 28 LTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDLKQYMDDCGGGLSMHNV 105 (291)
T ss_pred CCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CCHHHHHHhCCCCCCHHHH
Confidence 36789999998765322 222346789999999999999999999999999999999998 5999998764 36899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.++.|++.||.|||++|++||||||+||+++.+. ++.+.|||.+....-.. ..+....++..|.|||...+.
T Consensus 106 ~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~ 182 (291)
T cd07844 106 RLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG-ELKLADFGLARAKSVPS--KTYSNEVVTLWYRPPDVLLGSTEYS 182 (291)
T ss_pred HHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC-CEEECccccccccCCCC--ccccccccccccCCcHHhhcCcccC
Confidence 99999999999999999999999999999997653 34456999875432111 112233456789999987543
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||.+
T Consensus 183 ~~~Dv-~slG~il~~l~~g~~~~~~ 206 (291)
T cd07844 183 TSLDM-WGVGCIFYEMATGRPLFPG 206 (291)
T ss_pred cHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 6677753
No 315
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.89 E-value=1.3e-23 Score=212.03 Aligned_cols=158 Identities=18% Similarity=0.205 Sum_probs=129.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~~ 80 (477)
.+++.||+|+..... ...|+.++++++||||+++++++...+..++|||++. ++|.+++.. ...+++..+
T Consensus 89 ~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~ 159 (357)
T PHA03209 89 GQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSRPLPIDQA 159 (357)
T ss_pred CCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccCCCCHHHH
Confidence 457789999754331 3469999999999999999999999999999999996 789888865 357999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..|+.|++.||.|||++||+||||||+|||++.+. .+.++|||.+....... ...+..++..|+|||...+. .
T Consensus 160 ~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~-~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~ 235 (357)
T PHA03209 160 LIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD-QVCIGDLGAAQFPVVAP---AFLGLAGTVETNAPEVLARDKYNS 235 (357)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-CEEEecCccccccccCc---ccccccccccccCCeecCCCCCCc
Confidence 99999999999999999999999999999997643 23456999875432211 11234577889999998765 7
Q ss_pred cccccCcceEEEEEEe
Q psy6508 158 SLEYQRSKGELYVEFK 173 (477)
Q Consensus 158 ~~Di~~s~G~il~e~~ 173 (477)
++|+ ||+|+++||+.
T Consensus 236 ~~Di-wSlGvvl~ell 250 (357)
T PHA03209 236 KADI-WSAGIVLFEML 250 (357)
T ss_pred hhhH-HHHHHHHHHHH
Confidence 7899 99999999983
No 316
>KOG1035|consensus
Probab=99.89 E-value=2.9e-24 Score=230.06 Aligned_cols=172 Identities=24% Similarity=0.405 Sum_probs=139.4
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--------------------------------
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-------------------------------- 50 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-------------------------------- 50 (477)
+|+.||||+++... +.....++.+|+.+|.+|+|||||++|..|.+.
T Consensus 503 DGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q 581 (1351)
T KOG1035|consen 503 DGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQ 581 (1351)
T ss_pred cchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhhcccCCCcccceeeec
Confidence 79999999998887 667778899999999999999999999876421
Q ss_pred --------------------------------------------------------------------------------
Q psy6508 51 -------------------------------------------------------------------------------- 50 (477)
Q Consensus 51 -------------------------------------------------------------------------------- 50 (477)
T Consensus 582 ~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~ 661 (1351)
T KOG1035|consen 582 PTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEP 661 (1351)
T ss_pred cCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhhhhhccccCCcccc
Confidence
Q ss_pred -------CeEEEEEecCCCCCHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-Ccceeecc
Q psy6508 51 -------RYVYIILEYCDGGDLCSFIRSHEKL-SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGL 121 (477)
Q Consensus 51 -------~~~~lv~e~~~g~sL~~~l~~~~~l-~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~ 121 (477)
..+||-||||+..+|++++..+... .....+++++||++||.|+|++||+||||||.|||+++ +.+++.
T Consensus 662 ~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIG-- 739 (1351)
T KOG1035|consen 662 MVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIG-- 739 (1351)
T ss_pred ccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeec--
Confidence 1369999999977777776665333 47888999999999999999999999999999999986 456655
Q ss_pred cccceeccc---------CC-------cccccCCeEEEeccccccccCCCC------CcccccCcceEEEEEEeeecccc
Q psy6508 122 KQGVSEKAK---------GS-------AYIEQGNTKVICSVFEPREIPSSK------TSLEYQRSKGELYVEFKFAPFAS 179 (477)
Q Consensus 122 dfG~~~~~~---------gs-------~~~~~g~t~v~~~~y~ppE~~~~~------~~~Di~~s~G~il~e~~~~Pf~~ 179 (477)
|||++.... ++ +.....++.+||..|.|||++.+. .++|+ ||+|++++||.++ |.+
T Consensus 740 DFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDm-YSLGIVlFEM~yP-F~T 817 (1351)
T KOG1035|consen 740 DFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDM-YSLGIVLFEMLYP-FGT 817 (1351)
T ss_pred ccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhh-HHHHHHHHHHhcc-CCc
Confidence 999886511 11 111233468999999999998765 67999 9999999999876 875
No 317
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.88 E-value=7.9e-23 Score=197.10 Aligned_cols=169 Identities=22% Similarity=0.323 Sum_probs=132.4
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~~ 80 (477)
++..||+|.++..... .+.+.+|+.+++.++||||+++++.+. +...|++|||+++++|.+++.+. ..+++..+
T Consensus 29 ~~~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 104 (262)
T cd05071 29 GTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 104 (262)
T ss_pred CCceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHH
Confidence 3456999998765433 356889999999999999999999874 45689999999999999999763 35889999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++|++||||||+||+++++. ++.++|||.+......... ......++..|+|||...+. .
T Consensus 105 ~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~-~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~ 182 (262)
T cd05071 105 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTI 182 (262)
T ss_pred HHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC-cEEeccCCceeeccccccc-cccCCcccceecCHhHhccCCCCc
Confidence 99999999999999999999999999999997653 3445699988644322211 11122344579999987654 6
Q ss_pred cccccCcceEEEEEE---eeeccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
++|+ |++|+++|++ +..||.
T Consensus 183 ~~Dv-wslG~~l~ellt~g~~p~~ 205 (262)
T cd05071 183 KSDV-WSFGILLTELTTKGRVPYP 205 (262)
T ss_pred hhhH-HHHHHHHHHHHcCCCCCCC
Confidence 7899 9999999998 345665
No 318
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.88 E-value=5e-23 Score=197.05 Aligned_cols=169 Identities=22% Similarity=0.349 Sum_probs=139.1
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~ 81 (477)
+++.|++|.++... ..+.+.+|+.++++++||||+++++.+..+...|+++||+++++|.+++... ..+++..+.
T Consensus 27 ~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~ 102 (256)
T cd06612 27 TGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIA 102 (256)
T ss_pred CCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHH
Confidence 57899999986542 2578999999999999999999999999999999999999999999999763 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||+.|++||||+|+||+++++. .+.+.|||.+....... .......++..|.|||...+. .+
T Consensus 103 ~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~ 179 (256)
T cd06612 103 AILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG-QAKLADFGVSGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNNK 179 (256)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC-cEEEcccccchhcccCc--cccccccCCccccCHHHHhcCCCCch
Confidence 9999999999999999999999999999997653 24445999876543221 011234456789999987665 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|++++++ +..||..
T Consensus 180 ~Di-~s~G~il~~l~~g~~p~~~ 201 (256)
T cd06612 180 ADI-WSLGITAIEMAEGKPPYSD 201 (256)
T ss_pred hhH-HHHHHHHHHHHhCCCCCCC
Confidence 899 9999999999 6677764
No 319
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.88 E-value=2.1e-23 Score=198.28 Aligned_cols=170 Identities=28% Similarity=0.453 Sum_probs=141.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
++++.|++|+++.... .....+.+|+..+++++|||++++++.+...+..++++||++|++|.+++... ..+++..+
T Consensus 23 ~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~ 100 (253)
T cd05122 23 RTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQI 100 (253)
T ss_pred CCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHH
Confidence 3688999999876543 34567899999999999999999999999999999999999999999999875 57999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
..++.|++.||.+||++|++||||+|+||+++++ .+++ .|||.+........ .....++..|.|||...+.
T Consensus 101 ~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l--~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~ 175 (253)
T cd05122 101 AYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKL--IDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYD 175 (253)
T ss_pred HHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEE--eecccccccccccc---ccceecCCcccCHHHHcCCCCC
Confidence 9999999999999999999999999999999864 4444 58887755433211 2345667789999987655
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 176 ~~~Dv-~slG~il~~l~~g~~p~~~ 199 (253)
T cd05122 176 YKADI-WSLGITAIELAEGKPPYSE 199 (253)
T ss_pred ccccH-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 5566653
No 320
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.88 E-value=1.9e-23 Score=200.51 Aligned_cols=165 Identities=24% Similarity=0.390 Sum_probs=131.5
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEE-eCCeEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW-DERYVYIILEYCDGGDLCSFIRSHE--KLSEFQ 79 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~ 79 (477)
.|+.||+|.++... ..+.+.+|+.++++++|||++++++++. .++..+++|||+++++|.+++...+ .+++..
T Consensus 28 ~~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 103 (256)
T cd05082 28 RGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103 (256)
T ss_pred cCCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHH
Confidence 46789999875432 2456889999999999999999999754 5567999999999999999997644 488999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||+|||++|++||||||+||+++++. ++.++|||.+....... .+...+..|+|||...+.
T Consensus 104 ~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~-~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~ 177 (256)
T cd05082 104 LLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFS 177 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC-cEEecCCccceeccccC-----CCCccceeecCHHHHccCCCC
Confidence 999999999999999999999999999999997653 34456999876433211 122233469999987665
Q ss_pred CcccccCcceEEEEEE---eeeccc
Q psy6508 157 TSLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
.++|+ |++|+++|++ +..||.
T Consensus 178 ~~~Dv-~slG~i~~~l~~~g~~p~~ 201 (256)
T cd05082 178 TKSDV-WSFGILLWEIYSFGRVPYP 201 (256)
T ss_pred chhhh-HHHHHHHHHHHhCCCCCCC
Confidence 57899 9999999998 445554
No 321
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.88 E-value=1.5e-23 Score=205.26 Aligned_cols=171 Identities=22% Similarity=0.370 Sum_probs=134.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeC-----CeEEEEEecCCCCCHHHHHHh----
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRS---- 71 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~-----~~~~lv~e~~~g~sL~~~l~~---- 71 (477)
++++.||+|++.... .....+.+|+.+++++ +|||++++++++... +..|+||||++|++|.++++.
T Consensus 45 ~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~ 121 (291)
T cd06639 45 KDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLIC 121 (291)
T ss_pred CCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhc
Confidence 468899999986542 2235677899999999 899999999998753 368999999999999998863
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccc
Q psy6508 72 HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151 (477)
Q Consensus 72 ~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE 151 (477)
...+++..++.++.|++.||.|||++|++||||||+||+++.+. ++.+.|||.+........ ......++..|+|||
T Consensus 122 ~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~-~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE 198 (291)
T cd06639 122 GQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEG-GVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPE 198 (291)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC-CEEEeecccchhcccccc--cccCccCCccccChh
Confidence 34689999999999999999999999999999999999997643 334459998764332111 112345677899999
Q ss_pred cCCC--------CCcccccCcceEEEEEE--eeecccc
Q psy6508 152 IPSS--------KTSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 152 ~~~~--------~~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.... ..++|+ ||+|+++|++ +..||..
T Consensus 199 ~~~~~~~~~~~~~~~~Di-~slGvi~~el~~g~~p~~~ 235 (291)
T cd06639 199 VIACEQQYDYSYDARCDV-WSLGITAIELGDGDPPLFD 235 (291)
T ss_pred hhcCCCCcccccCCccch-HHHHHHHHHHhhCCCCCCC
Confidence 8643 157899 9999999999 6677764
No 322
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.88 E-value=2.7e-23 Score=202.57 Aligned_cols=174 Identities=21% Similarity=0.303 Sum_probs=141.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++++.||+|.++.........+.+.+|+.++++++||||+++++++..++..+++|||++++.+..+..+...+++..+.
T Consensus 24 ~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~ 103 (288)
T cd07833 24 ATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVR 103 (288)
T ss_pred CCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHH
Confidence 46889999998776555555678999999999999999999999999999999999999987777666665679999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK----T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~----~ 157 (477)
.++.|++.||.|||++|++||||+|+||+++++. .+.+.|||.+........ .......++..|+|||...+. .
T Consensus 104 ~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~-~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~ 181 (288)
T cd07833 104 SYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG-VLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGK 181 (288)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-CEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCc
Confidence 9999999999999999999999999999997642 344459998765443321 011234567789999987655 6
Q ss_pred cccccCcceEEEEEE--eeeccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
++|+ |++|++++++ +..||.
T Consensus 182 ~~Dv-~slG~~l~~l~~g~~~~~ 203 (288)
T cd07833 182 PVDV-WAIGCIMAELLDGEPLFP 203 (288)
T ss_pred hhhH-HHHHHHHHHHHhCCCCCC
Confidence 7899 9999999999 556665
No 323
>PRK04282 exosome complex RNA-binding protein Rrp42; Provisional
Probab=99.88 E-value=1.4e-21 Score=188.82 Aligned_cols=208 Identities=24% Similarity=0.311 Sum_probs=175.3
Q ss_pred CcceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccccccCCCCCcchHH
Q psy6508 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKE 193 (477)
Q Consensus 114 ~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~ 193 (477)
++.|.+.+.+|....++||++++.|+|++.|.++..+..... +- -.-|.+.+++.+.||+...+....++..+.+
T Consensus 32 ~e~R~i~i~~g~l~~a~GSa~v~~G~T~vl~~V~~~~~~p~~----~~-~~~g~i~~~v~~~~~a~~~~~~~~~~~~~~~ 106 (271)
T PRK04282 32 DEYRPIEIETGVIKKAEGSALVKLGNTQVLAGVKLEIGEPFP----DT-PNEGVLIVNAELLPLASPTFEPGPPDENAIE 106 (271)
T ss_pred ccccCeEEEeCCccCCCcEEEEEECCCEEEEEEEEEEecCCC----CC-CCCCEEEEEEEECCCcCccccCCCCCHHHHH
Confidence 578999999999999999999999999999999854422111 11 3458888999999998765544455667788
Q ss_pred HHHHHHHHhhhhhhccc--C---C---CCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCC------------------
Q psy6508 194 LGNHLKRALEPAVCRHE--F---S---NFQVDLFVLVLQNDGSALSAAINCANLALVDAAIP------------------ 247 (477)
Q Consensus 194 l~~~i~~~l~~~i~~~~--~---P---r~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~------------------ 247 (477)
+++++++.+++....+. + | .|.+.+.+.||++||+.+.++++|+++||.|+|+|
T Consensus 107 l~~~l~r~l~~~~~~dl~~L~I~~g~~~w~i~Vdv~VL~~dG~~~daa~~Aa~aAL~~~~iP~~~~~~~~~~~~~~~~~~ 186 (271)
T PRK04282 107 LARVVDRGIRESKAIDLEKLVIEPGKKVWVVFIDVYVLDHDGNLLDASMLAAVAALLNTKVPAVEEGEDGVVDKLGEDFP 186 (271)
T ss_pred HHHHHHHHHhccCCccHHHcEEecCcEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEcCCceeccCCCccc
Confidence 99999999887633222 2 4 45899999999999999999999999999999995
Q ss_pred --CCceEEEEEEEeeCCeEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEE--eeecHHHHHHHHHHHH
Q psy6508 248 --MYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLV--GTIQQERLADHIEQLI 323 (477)
Q Consensus 248 --m~~~v~a~s~~~~~~~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~--g~~~~~~~~~~l~~~~ 323 (477)
|++++.++|++..++.+++||+..|+.. ..+.+++++.++ ++|+.++.. |.++.+++.++++.|.
T Consensus 187 l~~~~~p~~vt~~~~~~~~v~Dpt~~Ee~~----------~~~~l~va~~~~-g~i~~l~~~g~~~~~~~~l~~~i~~A~ 255 (271)
T PRK04282 187 LPVNDKPVTVTFAKIGNYLIVDPTLEEESV----------MDARITITTDED-GNIVAIQKSGIGSFTEEEVDKAIDIAL 255 (271)
T ss_pred CCCCCeeEEEEEEEECCEEEECCCHHHHhh----------cCceEEEEECCC-CcEEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999995 478999998664 589999987 5599999999999999
Q ss_pred hcccchhhHHHHhHh
Q psy6508 324 GCCESLCTDRVQKLV 338 (477)
Q Consensus 324 ~~~~~i~~~~i~~~l 338 (477)
+.|+.+.+. +++.+
T Consensus 256 ~~~~~l~~~-~~~~l 269 (271)
T PRK04282 256 EKAKELREK-LKEAL 269 (271)
T ss_pred HHHHHHHHH-HHHHh
Confidence 999999999 88776
No 324
>KOG1151|consensus
Probab=99.88 E-value=1.6e-22 Score=196.05 Aligned_cols=175 Identities=28% Similarity=0.439 Sum_probs=142.8
Q ss_pred CCcEEEEEEcccCCCC-h----hHHHHHHHHHHHHHhcCCCCccceEEEEE-eCCeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 3 QHTEVAIKCIDKTKVS-E----NRFDSIVNEIKALKLLHHQHIVTMLDFLW-DERYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~-~----~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
..+.||+|+-...+.- + ...+...+|..|.+.|.||.||++|++|. +...+|-|+|||+|.+|.-||+.++-++
T Consensus 487 EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmS 566 (775)
T KOG1151|consen 487 EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMS 566 (775)
T ss_pred hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhh
Confidence 4678999985443321 1 12245779999999999999999999986 5568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CcEEccCCCCceeecc----CcceeecccccceecccCCcccc-----cCCeEEEec
Q psy6508 77 EFQCQQFVRQLVLALKFLREN--NVCHFDLKPQNILIKN----NTLKLAGLKQGVSEKAKGSAYIE-----QGNTKVICS 145 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~--givHrDlkp~NIll~~----~~~rl~~~dfG~~~~~~gs~~~~-----~g~t~v~~~ 145 (477)
+++++.|+.||+.||.||.+. .|+|-||||.|||+-+ +++++. |||++...++.+|-. ......||.
T Consensus 567 EKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKIT--DFGLSKIMdddSy~~vdGmeLTSQgAGTY 644 (775)
T KOG1151|consen 567 EKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKIT--DFGLSKIMDDDSYNSVDGMELTSQGAGTY 644 (775)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEee--ecchhhhccCCccCcccceeeecccCcee
Confidence 999999999999999999875 6999999999999954 466666 999999888777642 222356788
Q ss_pred cccccccCCCC-------CcccccCcceEEEEEE--eeeccccc
Q psy6508 146 VFEPREIPSSK-------TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 146 ~y~ppE~~~~~-------~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
||.|||.+.-. .++|+ ||.|+++|.. |..||...
T Consensus 645 WYLPPEcFvVgkePPKIsnKVDV-WSvGVIFyQClYGrKPFGhn 687 (775)
T KOG1151|consen 645 WYLPPECFVVGKEPPKISNKVDV-WSVGVIFYQCLYGRKPFGHN 687 (775)
T ss_pred eecCcceeecCCCCCccccceee-EeeehhhhhhhccCCCCCCc
Confidence 99999976422 67899 9999999998 66888643
No 325
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.88 E-value=1e-22 Score=201.05 Aligned_cols=169 Identities=20% Similarity=0.321 Sum_probs=137.0
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.+|+.||+|.+..... ..+..+++.+|+.+++.++||||+++++++..++..|+||||++ |+|.+++.. ...+++..
T Consensus 38 ~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~ 116 (307)
T cd06607 38 RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVE 116 (307)
T ss_pred CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcccCCCHHH
Confidence 3688999999865433 34455678999999999999999999999999999999999997 688777754 34689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC---C
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS---K 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~---~ 156 (477)
+..++.|++.||.|||++|++||||+|+||+++++. .+.+.|||.+..... ..+..++..|+|||...+ .
T Consensus 117 ~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~-~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~ 189 (307)
T cd06607 117 IAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG-TVKLADFGSASLVSP------ANSFVGTPYWMAPEVILAMDEG 189 (307)
T ss_pred HHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC-CEEEeecCcceecCC------CCCccCCccccCceeeeccCCC
Confidence 999999999999999999999999999999997653 334459997754322 123456678999998632 1
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||.+
T Consensus 190 ~~~~~sDv-~s~G~il~el~tg~~p~~~ 216 (307)
T cd06607 190 QYDGKVDV-WSLGITCIELAERKPPLFN 216 (307)
T ss_pred CCCcccch-HHHHHHHHHHHcCCCCCCC
Confidence 67899 9999999999 6677764
No 326
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.88 E-value=3.8e-23 Score=197.78 Aligned_cols=172 Identities=26% Similarity=0.331 Sum_probs=143.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh----CCCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS----HEKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~l~~ 77 (477)
.+++.|++|.+......+....++.+|+.++++++||||+++++++......|+++||+++++|.+++.+ ...+++
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~ 102 (256)
T cd08530 23 SDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPE 102 (256)
T ss_pred CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCH
Confidence 4688999999987665566667888999999999999999999999999999999999999999999876 346899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
..+..++.|++.||.|||+.|++|+||+|.||+++++. ++...|||.+...... ...+..++..|.|||...+.
T Consensus 103 ~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~-~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~ 177 (256)
T cd08530 103 QEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND-LVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRP 177 (256)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC-cEEEeeccchhhhccC----CcccccCCccccCHHHHCCCC
Confidence 99999999999999999999999999999999997642 3444599987554332 22334567789999998666
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 178 ~~~~~D~-~slG~~~~~l~~g~~p~~~ 203 (256)
T cd08530 178 YSYKSDI-WSLGCLLYEMATFAPPFEA 203 (256)
T ss_pred CCchhhH-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 6678764
No 327
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.88 E-value=1.1e-22 Score=197.66 Aligned_cols=171 Identities=19% Similarity=0.257 Sum_probs=133.2
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQF 83 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i 83 (477)
..||+|.++... .......+.+|+.++++++||||+++++++.. ...+++|||+++++|.+++... ..+++..+..+
T Consensus 37 ~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 114 (279)
T cd05057 37 IPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNW 114 (279)
T ss_pred eEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHH
Confidence 368999886554 34455678999999999999999999999887 7899999999999999999874 36899999999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cccc
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLE 160 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~D 160 (477)
+.|++.||.|||++|++||||||+||+++++. .+.+.|||.+.................+..|+|||..... .++|
T Consensus 115 ~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~-~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D 193 (279)
T cd05057 115 CVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSD 193 (279)
T ss_pred HHHHHHHHHHHHhCCEEecccCcceEEEcCCC-eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhh
Confidence 99999999999999999999999999997643 3344599987654322110011111123469999987544 6789
Q ss_pred ccCcceEEEEEE---eeecccc
Q psy6508 161 YQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 161 i~~s~G~il~e~---~~~Pf~~ 179 (477)
+ |++|++++|+ +..||.+
T Consensus 194 i-~slG~~l~el~~~g~~p~~~ 214 (279)
T cd05057 194 V-WSYGVTVWELMTFGAKPYEG 214 (279)
T ss_pred H-HHHHHHHHHHhcCCCCCCCC
Confidence 9 9999999986 4566653
No 328
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.88 E-value=2.4e-23 Score=200.27 Aligned_cols=171 Identities=23% Similarity=0.346 Sum_probs=135.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
++++.||+|.+...... .+.+.+|+.++++++||||+++++.+. .+..|++|||+++++|.+++... ..+++..
T Consensus 28 ~~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~ 103 (260)
T cd05067 28 NGHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINK 103 (260)
T ss_pred CCCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHH
Confidence 46788999998765433 356889999999999999999999864 45789999999999999998753 3689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||.|||+.|++||||||+||+++++. .+.+.|||.+........... ....++..|.|||.....
T Consensus 104 ~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~pe~~~~~~~~ 181 (260)
T cd05067 104 LIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL-CCKIADFGLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFT 181 (260)
T ss_pred HHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC-CEEEccCcceeecCCCCcccc-cCCcccccccCHHHhccCCcC
Confidence 999999999999999999999999999999998653 234459998865542221111 112234579999987655
Q ss_pred CcccccCcceEEEEEE---eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ |++|++++|+ +..||.+
T Consensus 182 ~~~Di-~slG~~l~el~~~g~~p~~~ 206 (260)
T cd05067 182 IKSDV-WSFGILLTEIVTYGRIPYPG 206 (260)
T ss_pred cccch-HHHHHHHHHHHhCCCCCCCC
Confidence 67899 9999999987 5577764
No 329
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.88 E-value=2.7e-23 Score=202.09 Aligned_cols=174 Identities=21% Similarity=0.273 Sum_probs=136.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe-CCeEEEEEecCCCCCHHHHHHhC--------C
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD-ERYVYIILEYCDGGDLCSFIRSH--------E 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~lv~e~~~g~sL~~~l~~~--------~ 73 (477)
++..|++|.+... ......+.+.+|+.++++++||||+++++++.. ....++++||+++++|.+++... .
T Consensus 34 ~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~ 112 (280)
T cd05043 34 KEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQ 112 (280)
T ss_pred ceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhcccccccccc
Confidence 3678999988643 344556778999999999999999999998765 56789999999999999999763 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccC
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~ 153 (477)
.+++..+..++.|++.||.|||++|++||||||+||+++++. .+...|||++...........+....++..|+|||..
T Consensus 113 ~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~-~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~ 191 (280)
T cd05043 113 ALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEEL-QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESL 191 (280)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCC-cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHH
Confidence 588999999999999999999999999999999999997642 3444599998654332221122223344569999987
Q ss_pred CCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 154 SSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 154 ~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.+. .++|+ ||+|+++||+ +..||..
T Consensus 192 ~~~~~~~~~Di-~slG~~l~el~~~g~~p~~~ 222 (280)
T cd05043 192 VNKEYSSASDV-WSFGVLLWELMTLGQTPYVE 222 (280)
T ss_pred hcCCCCchhhH-HHhHHHHHHHhcCCCCCcCc
Confidence 655 67899 9999999997 4566653
No 330
>PTZ00284 protein kinase; Provisional
Probab=99.88 E-value=3.2e-23 Score=216.73 Aligned_cols=168 Identities=18% Similarity=0.233 Sum_probs=132.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCC------CCccceEEEEEeC-CeEEEEEecCCCCCHHHHHHhCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH------QHIVTMLDFLWDE-RYVYIILEYCDGGDLCSFIRSHEK 74 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~~~~~~~~~-~~~~lv~e~~~g~sL~~~l~~~~~ 74 (477)
.+++.||||+++... .....+..|+.+++.++| ++++++++++..+ .++|+|||++ |++|.+++.+.+.
T Consensus 152 ~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~ 227 (467)
T PTZ00284 152 KRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGP 227 (467)
T ss_pred CCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCC
Confidence 367889999986432 223445678888877754 4588888888754 5789999998 6899999988888
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCc---------------ceeecccccceecccCCcccccC
Q psy6508 75 LSEFQCQQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNT---------------LKLAGLKQGVSEKAKGSAYIEQG 138 (477)
Q Consensus 75 l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~---------------~rl~~~dfG~~~~~~gs~~~~~g 138 (477)
+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .++.++|||.+..... ..
T Consensus 228 l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~ 302 (467)
T PTZ00284 228 FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----SR 302 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc-----cc
Confidence 9999999999999999999998 5999999999999997542 2456679997643221 12
Q ss_pred CeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 139 NTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 139 ~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.+.+++..|+|||++.+. .++|+ ||+|+++||| +..||.+
T Consensus 303 ~~~~gt~~Y~APE~~~~~~~~~~~Di-wSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 303 TAIVSTRHYRSPEVVLGLGWMYSTDM-WSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred ccccCCccccCcHHhhcCCCCcHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 345778899999998766 67899 9999999999 6677764
No 331
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.88 E-value=5e-23 Score=207.44 Aligned_cols=170 Identities=24% Similarity=0.366 Sum_probs=138.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC------CeEEEEEecCCCCCHHHHHHhCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE------RYVYIILEYCDGGDLCSFIRSHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------~~~~lv~e~~~g~sL~~~l~~~~~l 75 (477)
.+|+.||||.+.+..........+.+|+.++++++||||+++++++... ...|+||||+. ++|.+++... +
T Consensus 39 ~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--l 115 (353)
T cd07850 39 VTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD--L 115 (353)
T ss_pred CCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc--C
Confidence 4788999999876554555556788999999999999999999988643 35799999997 6999988753 8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
+...+..++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+....... ...+..++..|+|||...+
T Consensus 116 ~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~-~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~ 191 (353)
T cd07850 116 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILG 191 (353)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC-CEEEccCccceeCCCCC---CCCCCcccccccCHHHHhC
Confidence 9999999999999999999999999999999999998653 34445999886544321 1233456778999998866
Q ss_pred C---CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|++++++ +..||..
T Consensus 192 ~~~~~~~Dv-wslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 192 MGYKENVDI-WSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred CCCCCchhh-HhHHHHHHHHHHCCCCCCC
Confidence 5 67899 9999999999 6677764
No 332
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.88 E-value=2.7e-23 Score=199.98 Aligned_cols=170 Identities=21% Similarity=0.303 Sum_probs=132.4
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~~ 80 (477)
.+..||+|.+..... ..+.+.+|+.++++++|||++++++++. .+..+++|||+++++|.+++.... .+++..+
T Consensus 29 ~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~ 104 (260)
T cd05069 29 GTTKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQL 104 (260)
T ss_pred CCceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHH
Confidence 345799998765432 2356889999999999999999999875 456899999999999999997643 4789999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||+.|++||||||+||+++++. ++.+.|||.+........ .......++..|+|||...+. .
T Consensus 105 ~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~-~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~ 182 (260)
T cd05069 105 VDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL-VCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTI 182 (260)
T ss_pred HHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC-eEEECCCccceEccCCcc-cccCCCccchhhCCHHHhccCCcCh
Confidence 99999999999999999999999999999997653 344559998764332211 111122345579999987654 6
Q ss_pred cccccCcceEEEEEE---eeecccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
++|+ |++|+++|++ +..||.+
T Consensus 183 ~~Di-~slG~~l~el~t~g~~p~~~ 206 (260)
T cd05069 183 KSDV-WSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred HHHH-HHHHHHHHHHHhCCCCCCCC
Confidence 7899 9999999999 4567754
No 333
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.88 E-value=2.5e-23 Score=202.39 Aligned_cols=170 Identities=23% Similarity=0.287 Sum_probs=132.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHH-HHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC----CCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKA-LKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH----EKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~i-l~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----~~l~ 76 (477)
.+|+.||||.++....... ..++..|..+ ++.++||||+++++++..++..|++|||++ ++|.+++... ..++
T Consensus 24 ~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~ 101 (283)
T cd06617 24 PTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIP 101 (283)
T ss_pred CCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCC
Confidence 4789999999876644333 3445566665 566799999999999999999999999997 7898887642 3689
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
+..+..++.|++.||.|||++ +++||||||+||+++.+. .+.+.|||.+....... ......++..|+|||...+
T Consensus 102 ~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~-~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~ 177 (283)
T cd06617 102 EDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG-QVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINP 177 (283)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-CEEEeeccccccccccc---ccccccCCccccChhhcCC
Confidence 999999999999999999997 999999999999997643 33445999876443211 1123456778999998754
Q ss_pred C-------CcccccCcceEEEEEE--eeeccc
Q psy6508 156 K-------TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 156 ~-------~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
. .++|+ |++|+++|++ +..||.
T Consensus 178 ~~~~~~~~~~~Di-~slG~~l~~l~~g~~p~~ 208 (283)
T cd06617 178 ELNQKGYDVKSDV-WSLGITMIELATGRFPYD 208 (283)
T ss_pred cccccccCccccc-hhhHHHHHHHHhCCCCCC
Confidence 1 56899 9999999999 666775
No 334
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.88 E-value=1.5e-23 Score=199.99 Aligned_cols=174 Identities=25% Similarity=0.402 Sum_probs=143.9
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||+|.+++.... ......+.+|+.++++++||||+++++.+..++..|++|||+++++|.+++.....+++..+
T Consensus 16 ~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~ 95 (250)
T cd05123 16 DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERA 95 (250)
T ss_pred CCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHH
Confidence 35889999998776443 23456789999999999999999999999999999999999999999999988778999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|+++||.|||++|++|+||+|+||+++.+. ++.+.|||......... .......++..|.|||...+. .
T Consensus 96 ~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~-~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~ 172 (250)
T cd05123 96 RFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG-HIKLTDFGLAKELSSEG--SRTNTFCGTPEYLAPEVLLGKGYGK 172 (250)
T ss_pred HHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC-cEEEeecCcceecccCC--CcccCCcCCccccChHHhCCCCCCc
Confidence 99999999999999999999999999999997653 34446999876544321 112234556679999987665 5
Q ss_pred cccccCcceEEEEEE--eeecccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
++|+ |++|++++++ +..||..
T Consensus 173 ~~D~-~slG~~~~~l~~g~~p~~~ 195 (250)
T cd05123 173 AVDW-WSLGVLLYEMLTGKPPFYA 195 (250)
T ss_pred hhhH-HHHHHHHHHHHHCCCCCCC
Confidence 6899 9999999999 6677754
No 335
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.88 E-value=8.7e-23 Score=200.27 Aligned_cols=172 Identities=25% Similarity=0.359 Sum_probs=139.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.+.... ....+.+.+|+.+++.++||||+++++.+...+..|+|+||+++++|.+++.+. .+++..+.
T Consensus 42 ~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~ 118 (293)
T cd06647 42 ATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIA 118 (293)
T ss_pred CCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc-CCCHHHHH
Confidence 367889999986443 233467889999999999999999999999999999999999999999998763 68899999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+........ ......++..|+|||...+. .+
T Consensus 119 ~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~-~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~ 195 (293)
T cd06647 119 AVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPK 195 (293)
T ss_pred HHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC-CEEEccCcceeccccccc--ccccccCChhhcCchhhccCCCCch
Confidence 9999999999999999999999999999997643 334459997754332221 11234566789999987655 67
Q ss_pred ccccCcceEEEEEE--eeeccccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
+|+ |++|++++++ +..||...
T Consensus 196 ~Dv-~slG~ll~~ll~g~~pf~~~ 218 (293)
T cd06647 196 VDI-WSLGIMAIEMVEGEPPYLNE 218 (293)
T ss_pred hhH-HHHHHHHHHHHhCCCCCCCC
Confidence 899 9999999999 77888653
No 336
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.88 E-value=7.2e-23 Score=199.54 Aligned_cols=168 Identities=20% Similarity=0.311 Sum_probs=132.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe--CCeEEEEEecCCCCCHHHHHHhC-CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSH-EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~ 78 (477)
.+++.||+|.+... .....+.+.+|+.++++++||||+++++++.. ...+++||||+++++|.+++.+. ..+++.
T Consensus 31 ~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~ 108 (284)
T cd05081 31 NTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHR 108 (284)
T ss_pred CCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHH
Confidence 46789999998654 34456788999999999999999999998653 34689999999999999999764 368999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCc-ccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSA-YIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~-~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+..++.|++.||.|||++|++||||||+||+++.+. ++.+.|||.+....... .............|.|||...+.
T Consensus 109 ~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 187 (284)
T cd05081 109 KLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN-RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESK 187 (284)
T ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC-eEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCC
Confidence 9999999999999999999999999999999997653 34456999876543221 11111111122358999987655
Q ss_pred --CcccccCcceEEEEEEe
Q psy6508 157 --TSLEYQRSKGELYVEFK 173 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~~ 173 (477)
.++|+ |++|++++|+.
T Consensus 188 ~~~~~Di-~slG~~l~el~ 205 (284)
T cd05081 188 FSVASDV-WSFGVVLYELF 205 (284)
T ss_pred cChHHHH-HHHHHHHHHHh
Confidence 67899 99999999993
No 337
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.88 E-value=2.8e-23 Score=202.49 Aligned_cols=171 Identities=22% Similarity=0.379 Sum_probs=133.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEE-----eCCeEEEEEecCCCCCHHHHHHh----
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLW-----DERYVYIILEYCDGGDLCSFIRS---- 71 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~-----~~~~~~lv~e~~~g~sL~~~l~~---- 71 (477)
.+++.||+|++.... ...+.+.+|+.+++.+ +||||+++++++. .++.++++|||++|++|.+++..
T Consensus 41 ~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 117 (286)
T cd06638 41 KNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKR 117 (286)
T ss_pred CCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhcc
Confidence 467899999875432 2235678899999999 7999999999874 34579999999999999998753
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccc
Q psy6508 72 HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPRE 151 (477)
Q Consensus 72 ~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE 151 (477)
...+++..+..++.|++.||.|||+++++||||||+||+++.+. .+.++|||.+....... ....+..++..|+|||
T Consensus 118 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~-~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE 194 (286)
T cd06638 118 GERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEG-GVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPE 194 (286)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCC-CEEEccCCceeecccCC--CccccccCCCcccChh
Confidence 24688999999999999999999999999999999999997653 23345999875443221 1223456778899999
Q ss_pred cCCCC--------CcccccCcceEEEEEE--eeecccc
Q psy6508 152 IPSSK--------TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 152 ~~~~~--------~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.+... .++|+ ||+|++++++ +..||..
T Consensus 195 ~~~~~~~~~~~~~~~~Dv-~slGvi~~el~~g~~p~~~ 231 (286)
T cd06638 195 VIACEQQLDSTYDARCDV-WSLGITAIELGDGDPPLAD 231 (286)
T ss_pred hhchhhhccccccchhhh-hhHHHHHHHHhcCCCCCCC
Confidence 86421 57899 9999999999 5566653
No 338
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.88 E-value=1.8e-22 Score=193.38 Aligned_cols=171 Identities=20% Similarity=0.304 Sum_probs=136.3
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~ 81 (477)
+++.+|+|.+...... ...+.+|+.++++++|||++++++++......+++|||+++++|.+++... +.+++..+.
T Consensus 27 ~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~ 103 (256)
T cd05112 27 EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLL 103 (256)
T ss_pred CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHH
Confidence 4678999998755433 246889999999999999999999999999999999999999999999764 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+........ .......++..|+|||...+. .+
T Consensus 104 ~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~-~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~ 181 (256)
T cd05112 104 GMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ-VVKVSDFGMTRFVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSK 181 (256)
T ss_pred HHHHHHHHHHHHHHHCCccccccccceEEEcCCC-eEEECCCcceeecccCcc-cccCCCccchhhcCHhHhccCCcChH
Confidence 9999999999999999999999999999997643 344569998754322211 111122234579999987655 67
Q ss_pred ccccCcceEEEEEE---eeecccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
+|+ |++|+++||+ +..||..
T Consensus 182 ~Dv-~slG~~l~el~~~g~~p~~~ 204 (256)
T cd05112 182 SDV-WSFGVLMWEVFSEGKTPYEN 204 (256)
T ss_pred HHH-HHHHHHHHHHHcCCCCCCCc
Confidence 899 9999999997 4567753
No 339
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.88 E-value=4e-23 Score=197.99 Aligned_cols=165 Identities=22% Similarity=0.352 Sum_probs=132.3
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~~ 80 (477)
+++.||+|.++... ..+.+.+|+.+++.++|||++++++++..+ ..+++|||+++++|.+++.... .+++..+
T Consensus 28 ~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~ 102 (254)
T cd05083 28 TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQL 102 (254)
T ss_pred CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHH
Confidence 57889999986432 235688999999999999999999998654 4799999999999999997643 5889999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+....... ........|.|||...+. .
T Consensus 103 ~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~-~~kl~Dfg~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~ 176 (254)
T cd05083 103 LQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG-VAKVSDFGLARVGSMGV-----DNSKLPVKWTAPEALKHKKFSS 176 (254)
T ss_pred HHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC-cEEECCCccceeccccC-----CCCCCCceecCHHHhccCCcCc
Confidence 99999999999999999999999999999997643 34445999876433211 122234579999987654 5
Q ss_pred cccccCcceEEEEEE---eeecccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
++|+ |++|++++++ +..||..
T Consensus 177 ~~Dv-~slG~~l~el~~~g~~p~~~ 200 (254)
T cd05083 177 KSDV-WSYGVLLWEVFSYGRAPYPK 200 (254)
T ss_pred hhhH-HHHHHHHHHHHhCCCCCCcc
Confidence 6899 9999999997 5677754
No 340
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.88 E-value=6.1e-23 Score=199.95 Aligned_cols=172 Identities=26% Similarity=0.360 Sum_probs=138.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~ 79 (477)
.+|+.||||.++...........+.+|+.++++++||||+++++++.+.+..+++|||+. ++|..++... ..+++..
T Consensus 23 ~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~ 101 (284)
T cd07860 23 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPL 101 (284)
T ss_pred CCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHH
Confidence 468899999987665444445678899999999999999999999999999999999996 6899988653 4689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|++.||+|||++|++||||+|+||+++.+. .+...|||.+....... .......++..|+|||...+.
T Consensus 102 ~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~ 178 (284)
T cd07860 102 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYY 178 (284)
T ss_pred HHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-CEEEeeccchhhcccCc--cccccccccccccCCeEEecCCCC
Confidence 999999999999999999999999999999997653 34445999875432111 111233456789999987553
Q ss_pred -CcccccCcceEEEEEE--eeeccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|+++|++ +..||.
T Consensus 179 ~~~~Dv-~slG~il~~l~tg~~p~~ 202 (284)
T cd07860 179 STAVDI-WSLGCIFAEMVTRRALFP 202 (284)
T ss_pred CcHHHH-HHHHHHHHHHHHCCCCCC
Confidence 56899 9999999999 556665
No 341
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.88 E-value=1.1e-22 Score=198.07 Aligned_cols=172 Identities=27% Similarity=0.374 Sum_probs=137.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE---KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---~l~~~ 78 (477)
.+|+.||||+++.... ....+.+.+|+.++++++||||+++++++...+..++||||++ ++|.+++...+ .+++.
T Consensus 23 ~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~ 100 (284)
T cd07836 23 TTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KDLKKYMDTHGVRGALDPN 100 (284)
T ss_pred CCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC-ccHHHHHHhcCCCCCcCHH
Confidence 4688999999876543 2234567789999999999999999999999999999999998 58999887543 58999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++|++||||||+||+++++. .+.++|||.+....... ....+..++..|+|||...+.
T Consensus 101 ~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~-~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~ 177 (284)
T cd07836 101 TVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG-ELKLADFGLARAFGIPV--NTFSNEVVTLWYRAPDVLLGSRT 177 (284)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC-cEEEeecchhhhhcCCc--cccccccccccccChHHhcCCCC
Confidence 9999999999999999999999999999999997642 34445998875432211 122345567789999987543
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||.+
T Consensus 178 ~~~~~Dv-~slG~~l~~l~~g~~~~~~ 203 (284)
T cd07836 178 YSTSIDI-WSVGCIMAEMITGRPLFPG 203 (284)
T ss_pred CCcHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 6677763
No 342
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.88 E-value=1.2e-22 Score=200.66 Aligned_cols=172 Identities=24% Similarity=0.330 Sum_probs=135.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhC-CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSH-EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~-~~l~~~ 78 (477)
.+|+.||+|.++...........+.+|+.++++++||||+++++++... +..++||||++ ++|.+++... ..+++.
T Consensus 30 ~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~ 108 (309)
T cd07845 30 TSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMPTPFSES 108 (309)
T ss_pred CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHhcccCCCHH
Confidence 4689999999876543333334567899999999999999999998755 56899999997 6899988763 568999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++|++||||||+||+++.+. ++.++|||.+....... ........+..|+|||...+.
T Consensus 109 ~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~ 185 (309)
T cd07845 109 QVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG-CLKIADFGLARTYGLPA--KPMTPKVVTLWYRAPELLLGCTT 185 (309)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-CEEECccceeeecCCcc--CCCCcccccccccChhhhcCCCC
Confidence 9999999999999999999999999999999997643 34445999876543211 111233456789999987643
Q ss_pred --CcccccCcceEEEEEE--eeeccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|+++|++ +..||.
T Consensus 186 ~~~~~Dv-wslG~il~el~~g~~~f~ 210 (309)
T cd07845 186 YTTAIDM-WAVGCILAELLAHKPLLP 210 (309)
T ss_pred cCchHHH-HHHHHHHHHHHhCCCCCC
Confidence 67899 9999999999 556665
No 343
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.88 E-value=7e-23 Score=198.58 Aligned_cols=176 Identities=26% Similarity=0.398 Sum_probs=144.7
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+|+.||+|++.+... .....+.+.+|..++++++ ||||+++++.+...+..+++||++++++|.+++.+.+.+++..
T Consensus 24 ~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~ 103 (280)
T cd05581 24 ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKC 103 (280)
T ss_pred CCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHH
Confidence 4788999999877543 2344567889999999998 9999999999999999999999999999999999887899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc------------------ccCCeE
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI------------------EQGNTK 141 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~------------------~~g~t~ 141 (477)
+..++.|++.||.|||++|++|+||+|+||+++.++ ++..+|||......+.... ......
T Consensus 104 ~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (280)
T cd05581 104 TRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM-HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASF 182 (280)
T ss_pred HHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC-CEEecCCccccccCCccccccCCCCCccccccccccccccccc
Confidence 999999999999999999999999999999997643 3455699987654433221 112234
Q ss_pred EEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 142 VICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 142 v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++..|.|||...+. .++|+ |++|++++++ +..||..
T Consensus 183 ~~~~~~~~Pe~~~~~~~~~~~Di-~slG~~l~~l~~g~~p~~~ 224 (280)
T cd05581 183 VGTAEYVSPELLNEKPAGKSSDL-WALGCIIYQMLTGKPPFRG 224 (280)
T ss_pred cCCccccCHHHhCCCCCChhhhH-HHHHHHHHHHHhCCCCCCC
Confidence 556789999987655 56899 9999999998 6677764
No 344
>KOG1094|consensus
Probab=99.88 E-value=1.8e-23 Score=208.69 Aligned_cols=173 Identities=23% Similarity=0.298 Sum_probs=145.1
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQCQ 81 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~~~ 81 (477)
+..||+|.++... ....+.+|.+|+++|.+|+||||++++++|..++.+++||||+++|+|.+++..+. .+......
T Consensus 562 ~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~v 640 (807)
T KOG1094|consen 562 PLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGV 640 (807)
T ss_pred ceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhH
Confidence 5789999987553 44556889999999999999999999999999999999999999999999998873 34566677
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
+++.||+.|++||.+.++||||+.+.|+|++.+. .+.++|||.++......|.......+....||++|.+.-. .+
T Consensus 641 si~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~-~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFtta 719 (807)
T KOG1094|consen 641 SICTQIASGMAYLESLNFVHRDLATRNCLVDGEF-TIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTA 719 (807)
T ss_pred HHHHHHHHHHHHHHhhchhhccccccceeecCcc-cEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccch
Confidence 8999999999999999999999999999998763 3444699999876655555554556677789999976544 78
Q ss_pred ccccCcceEEEEEEe----eecccc
Q psy6508 159 LEYQRSKGELYVEFK----FAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~~----~~Pf~~ 179 (477)
+|+ |++|+++||+. -.||+.
T Consensus 720 SDv-WafgvTlwE~~~~C~e~Py~~ 743 (807)
T KOG1094|consen 720 SDV-WAFGVTLWEVFMLCREQPYSQ 743 (807)
T ss_pred hhh-hhhHHHHHHHHHHHhhCchhh
Confidence 999 99999999993 367764
No 345
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.88 E-value=8.1e-23 Score=199.98 Aligned_cols=172 Identities=23% Similarity=0.366 Sum_probs=135.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
.+|+.||+|.+..... ......+.+|+.+++.++||||+++++++..+...|+||||+. ++|.+++... ..+++..+
T Consensus 28 ~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~ 105 (291)
T cd07870 28 INGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNV 105 (291)
T ss_pred CCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHH
Confidence 3688999999876542 2223456789999999999999999999999999999999996 7887777543 46788999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+...... ........++..|+|||...+.
T Consensus 106 ~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~-~~~l~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~ 182 (291)
T cd07870 106 RLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG-ELKLADFGLARAKSIP--SQTYSSEVVTLWYRPPDVLLGATDYS 182 (291)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC-cEEEeccccccccCCC--CCCCCCccccccccCCceeecCCCCC
Confidence 99999999999999999999999999999997643 3444599987542211 1122344567889999987543
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||..
T Consensus 183 ~~~Dv-~slG~~l~~l~~g~~~f~~ 206 (291)
T cd07870 183 SALDI-WGAGCIFIEMLQGQPAFPG 206 (291)
T ss_pred cHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 6677763
No 346
>KOG0695|consensus
Probab=99.88 E-value=1.4e-23 Score=197.00 Aligned_cols=175 Identities=23% Similarity=0.385 Sum_probs=152.7
Q ss_pred CCCcEEEEEEcccCCCCh-hHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSE-NRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
++.+.||+|+++++..++ +...-.+.|-.+..+- +||++|.++.+|+.+..+++|.||++||+|--.+++++++|++.
T Consensus 273 ~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeh 352 (593)
T KOG0695|consen 273 KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH 352 (593)
T ss_pred ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHH
Confidence 577899999999987754 4556678899998887 79999999999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
++.+..+|+.||.|||++||++||||.+|+|++. +.+++. |+|.++..-+.. ....|..+|+.|.+||.+.+.
T Consensus 353 arfys~ei~lal~flh~rgiiyrdlkldnvlldaeghiklt--dygmcke~l~~g--d~tstfcgtpnyiapeilrgeey 428 (593)
T KOG0695|consen 353 ARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLT--DYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEY 428 (593)
T ss_pred hhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeec--ccchhhcCCCCC--cccccccCCCcccchhhhccccc
Confidence 9999999999999999999999999999999986 456665 999886433322 234578899999999999988
Q ss_pred -CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
.++|+ |++|++++|| +..||.-.+
T Consensus 429 gfsvdw-walgvlmfemmagrspfdivg 455 (593)
T KOG0695|consen 429 GFSVDW-WALGVLMFEMMAGRSPFDIVG 455 (593)
T ss_pred CceehH-HHHHHHHHHHHcCCCCcceec
Confidence 88999 9999999999 889997544
No 347
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.88 E-value=7.7e-23 Score=202.26 Aligned_cols=176 Identities=21% Similarity=0.334 Sum_probs=138.5
Q ss_pred CCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhC-----CC
Q psy6508 3 QHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSH-----EK 74 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~-----~~ 74 (477)
+++.||+|.+..... .....+.+.+|+.++++++||||+++++++... ..+|+||||++ ++|.+++... ..
T Consensus 26 ~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~ 104 (316)
T cd07842 26 DGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVS 104 (316)
T ss_pred CCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCC-cCHHHHHHhhccCCCcC
Confidence 688999999887432 122345678899999999999999999999988 78999999997 5787777532 26
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc---CcceeecccccceecccCCcc-cccCCeEEEecccccc
Q psy6508 75 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLAGLKQGVSEKAKGSAY-IEQGNTKVICSVFEPR 150 (477)
Q Consensus 75 l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~---~~~rl~~~dfG~~~~~~gs~~-~~~g~t~v~~~~y~pp 150 (477)
+++..+..++.|++.||.|||++|++||||||+||+++. ....+.++|||.+........ ...++...++..|+||
T Consensus 105 ~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 184 (316)
T cd07842 105 IPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAP 184 (316)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCH
Confidence 889999999999999999999999999999999999976 123455569998765432221 1223445677889999
Q ss_pred ccCCCC----CcccccCcceEEEEEE--eeeccccc
Q psy6508 151 EIPSSK----TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 151 E~~~~~----~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
|...+. .++|+ ||+|++++++ +..||.+.
T Consensus 185 E~~~~~~~~~~~~Dv-~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 185 ELLLGARHYTKAIDI-WAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred HHHhCCCCCCcHHHH-HHHHHHHHHHHhcCCCCcCC
Confidence 976543 56899 9999999998 67788754
No 348
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.88 E-value=1.7e-22 Score=196.41 Aligned_cols=172 Identities=22% Similarity=0.331 Sum_probs=139.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++.||+|.+..... ....+.+.+|+.++++++||||+++++.+..++..|+||||+++++|.+++.. ..+++..+.
T Consensus 27 ~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~ 104 (277)
T cd06641 27 RTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIA 104 (277)
T ss_pred CCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHH
Confidence 4678999999865432 33456789999999999999999999999999999999999999999999875 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.|++.|+.|||++|++|+||+|+||+++.+. .+..+|||.+....... ....+..++..|+|||...+. .+
T Consensus 105 ~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~ 181 (277)
T cd06641 105 TILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSK 181 (277)
T ss_pred HHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC-CEEEeecccceecccch--hhhccccCCccccChhhhccCCCCch
Confidence 9999999999999999999999999999997653 34445999775433211 111234566789999987654 56
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|++++++ +..||..
T Consensus 182 ~Dv-~slG~~l~~l~~g~~p~~~ 203 (277)
T cd06641 182 ADI-WSLGITAIELAKGEPPHSE 203 (277)
T ss_pred hhH-HHHHHHHHHHHcCCCCCCc
Confidence 899 9999999999 6667753
No 349
>KOG1006|consensus
Probab=99.88 E-value=2.6e-23 Score=189.96 Aligned_cols=170 Identities=21% Similarity=0.272 Sum_probs=139.2
Q ss_pred CCCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-----CCC
Q psy6508 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-----HEK 74 (477)
Q Consensus 1 ~~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-----~~~ 74 (477)
+++|+..|||+++.... +...+++..|.....+- +.||||++||+...++.-||.||+|+ .||..+.+. +..
T Consensus 86 k~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ 163 (361)
T KOG1006|consen 86 KPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-ISLDKLYKRVYSVQKSR 163 (361)
T ss_pred CccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhcc
Confidence 47899999999987764 45567888898876555 79999999999999999999999997 888876642 347
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 75 LSEFQCQQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 75 l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
+++..+-.|..-.+.||.||-. ..|+|||+||+|||++. +.+++ ||||++....+|-- ..-..||..|+|||.
T Consensus 164 ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKL--CDFGIcGqLv~SiA---kT~daGCrpYmAPER 238 (361)
T KOG1006|consen 164 IPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKL--CDFGICGQLVDSIA---KTVDAGCRPYMAPER 238 (361)
T ss_pred CcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEee--ecccchHhHHHHHH---hhhccCCccccChhc
Confidence 9999999999999999999975 58999999999999976 56665 59999977666532 234689999999998
Q ss_pred CCCC-----CcccccCcceEEEEEEee--eccc
Q psy6508 153 PSSK-----TSLEYQRSKGELYVEFKF--APFA 178 (477)
Q Consensus 153 ~~~~-----~~~Di~~s~G~il~e~~~--~Pf~ 178 (477)
+... ..+|+ ||+|+++||+.. .|+.
T Consensus 239 i~p~~~gyDiRSDv-WSLGITL~EvAtG~fPyr 270 (361)
T KOG1006|consen 239 IDPSDKGYDIRSDV-WSLGITLYEVATGNFPYR 270 (361)
T ss_pred cCCccCCcchhhhh-hhhcceEeeeecCCCCcc
Confidence 8765 56899 999999999954 4444
No 350
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.87 E-value=4e-23 Score=201.08 Aligned_cols=171 Identities=23% Similarity=0.368 Sum_probs=135.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEe------CCeEEEEEecCCCCCHHHHHHhC--
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWD------ERYVYIILEYCDGGDLCSFIRSH-- 72 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~------~~~~~lv~e~~~g~sL~~~l~~~-- 72 (477)
++++.||+|++.... .....+..|+.+++++ +||||+++++++.. ....|++|||+++++|.+++...
T Consensus 39 ~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~ 115 (282)
T cd06636 39 KTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG 115 (282)
T ss_pred CCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC
Confidence 467899999986542 3345688999999999 79999999998853 45789999999999999999763
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 73 EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 73 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
..+++..+..++.|++.||.|||++|++||||||+||+++++. .+.+.|||.+....... ....+..++..|+|||.
T Consensus 116 ~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~-~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~ 192 (282)
T cd06636 116 NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENA-EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEV 192 (282)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-CEEEeeCcchhhhhccc--cCCCcccccccccCHhh
Confidence 3588889999999999999999999999999999999997653 34456999875433211 12234567788999998
Q ss_pred CCCC--------CcccccCcceEEEEEE--eeecccc
Q psy6508 153 PSSK--------TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 153 ~~~~--------~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+... .++|+ |++|+++|++ +..||..
T Consensus 193 l~~~~~~~~~~~~~~Dv-wslG~~l~el~~g~~p~~~ 228 (282)
T cd06636 193 IACDENPDATYDYRSDI-WSLGITAIEMAEGAPPLCD 228 (282)
T ss_pred cCcccCcCcCCCcccch-hHHHHHHHHHHhCCCCccc
Confidence 6521 46899 9999999999 6677754
No 351
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.87 E-value=4e-23 Score=203.05 Aligned_cols=173 Identities=26% Similarity=0.374 Sum_probs=135.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC----------eEEEEEecCCCCCHHHHHHh
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER----------YVYIILEYCDGGDLCSFIRS 71 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----------~~~lv~e~~~g~sL~~~l~~ 71 (477)
.+|+.||+|.++...........+.+|+.++++++||||+++++++.+.. .+|+++||++ ++|..++..
T Consensus 30 ~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~ 108 (302)
T cd07864 30 DTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD-HDLMGLLES 108 (302)
T ss_pred CCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccC-ccHHHHHhc
Confidence 46889999998765433334456788999999999999999999887654 7999999998 578887765
Q ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccc
Q psy6508 72 H-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR 150 (477)
Q Consensus 72 ~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~pp 150 (477)
. ..+++..++.++.|++.||.|||+.||+||||||+||+++++. .+.+.|||.+........ ........+..|+||
T Consensus 109 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~-~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~P 186 (302)
T cd07864 109 GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKG-QIKLADFGLARLYNSEES-RPYTNKVITLWYRPP 186 (302)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-cEEeCcccccccccCCcc-cccccceeccCccCh
Confidence 4 3689999999999999999999999999999999999998653 334459998764432211 111223456789999
Q ss_pred ccCCCC----CcccccCcceEEEEEE--eeeccc
Q psy6508 151 EIPSSK----TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 151 E~~~~~----~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
|...+. .++|+ |++|++++++ +..||.
T Consensus 187 E~~~~~~~~~~~~Di-~slG~~~~el~~g~~~~~ 219 (302)
T cd07864 187 ELLLGEERYGPAIDV-WSCGCILGELFTKKPIFQ 219 (302)
T ss_pred HHhcCCCCCCchhHH-HHHHHHHHHHHhCCCCCC
Confidence 977543 67899 9999999999 666665
No 352
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.87 E-value=3.1e-22 Score=198.58 Aligned_cols=169 Identities=21% Similarity=0.341 Sum_probs=137.0
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.++..||+|.+..... ..+....+.+|+.++++++|||++++++++..++..|+||||+. |+|.+.+.. ..++++..
T Consensus 48 ~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~ 126 (317)
T cd06635 48 RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVE 126 (317)
T ss_pred CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHHhcCCCCHHH
Confidence 4678999999876533 33455678999999999999999999999999999999999997 588887754 45689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC---C
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS---K 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~---~ 156 (477)
+..++.|++.||.|||++|++||||+|+||+++.+. .+.+.|||.+.... ...+..++..|.|||.... .
T Consensus 127 ~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~-~~kl~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~ 199 (317)
T cd06635 127 IAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG-QVKLADFGSASIAS------PANSFVGTPYWMAPEVILAMDEG 199 (317)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC-CEEEecCCCccccC------CcccccCCccccChhhhhcCCCC
Confidence 999999999999999999999999999999997643 34445999764322 2234456778999998631 1
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 200 ~~~~~~Dv-~slGvil~el~~g~~p~~~ 226 (317)
T cd06635 200 QYDGKVDV-WSLGITCIELAERKPPLFN 226 (317)
T ss_pred CCCccccH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6677764
No 353
>KOG4257|consensus
Probab=99.87 E-value=9.5e-23 Score=204.77 Aligned_cols=172 Identities=19% Similarity=0.296 Sum_probs=145.2
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQF 83 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~~i 83 (477)
--||||..+.+. ..+..+.|..|..+|+.++||||++++|++.+ .+.|||||.++.|.|+.||+.++ .++......+
T Consensus 419 iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly 496 (974)
T KOG4257|consen 419 IAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLY 496 (974)
T ss_pred eeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecccchhHHHHHHhccccchHHHHHHH
Confidence 358999886644 45557899999999999999999999999865 57899999999999999998865 6999999999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cccc
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLE 160 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~D 160 (477)
++||+.||.|||++.+|||||...|||+.+.++ +.+.|||+++..+.++|+....++ ..--||+||...-+ .++|
T Consensus 497 ~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~C-VKLaDFGLSR~~ed~~yYkaS~~k-LPIKWmaPESINfRrFTtASD 574 (974)
T KOG4257|consen 497 CYQICTALAYLESKRFVHRDIAARNILVSSPQC-VKLADFGLSRYLEDDAYYKASRGK-LPIKWMAPESINFRRFTTASD 574 (974)
T ss_pred HHHHHHHHHHHHhhchhhhhhhhhheeecCcce-eeecccchhhhccccchhhccccc-cceeecCccccchhcccchhh
Confidence 999999999999999999999999999987642 334699999998888887655322 22349999987644 7889
Q ss_pred ccCcceEEEEEE---eeecccccc
Q psy6508 161 YQRSKGELYVEF---KFAPFASQI 181 (477)
Q Consensus 161 i~~s~G~il~e~---~~~Pf~~~~ 181 (477)
+ |.||+.+||+ |..||.+..
T Consensus 575 V-WMFgVCmWEIl~lGvkPfqgvk 597 (974)
T KOG4257|consen 575 V-WMFGVCMWEILSLGVKPFQGVK 597 (974)
T ss_pred H-HHHHHHHHHHHHhcCCcccccc
Confidence 9 9999999998 889998743
No 354
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.87 E-value=3.9e-23 Score=201.90 Aligned_cols=174 Identities=20% Similarity=0.304 Sum_probs=139.4
Q ss_pred CCcEEEEEEcccCCCC--hhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 3 QHTEVAIKCIDKTKVS--ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
+++.||||.+++.... ....+.+.+|+.+++++ +||||+++++.+......|+||||+++++|.+++.....+++..
T Consensus 27 ~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 106 (288)
T cd05583 27 AGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESE 106 (288)
T ss_pred CCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHH
Confidence 5788999998754332 23345788999999999 69999999999999999999999999999999998777899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
+..++.|+++||.|||+.|++||||||.||+++.+. ++.++|||++......... ......+...|++||...+.
T Consensus 107 ~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~ 184 (288)
T cd05583 107 VRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG-HVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGG 184 (288)
T ss_pred HHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC-CEEEEECcccccccccccc-ccccccCCccccCHHHhcCCCCC
Confidence 999999999999999999999999999999997653 3445699987543322110 11123456679999987543
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 185 ~~~~~Dv-~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 185 HDKAVDW-WSLGVLTFELLTGASPFTV 210 (288)
T ss_pred Ccchhhh-HHHHHHHHHHHhCCCCccc
Confidence 57899 9999999999 5677753
No 355
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.87 E-value=4.3e-22 Score=191.56 Aligned_cols=170 Identities=22% Similarity=0.325 Sum_probs=133.2
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC--CCCCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~~~~ 80 (477)
.+..||+|.+.... ...+.+.+|+.++++++||||+++++.+.. ...+++|||+++++|.+++.+. ..+++..+
T Consensus 29 ~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~ 104 (260)
T cd05073 29 KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 104 (260)
T ss_pred CCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHH
Confidence 45679999876542 234678899999999999999999999877 7789999999999999999763 35788899
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---C
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
..++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+......... ......++..|+|||..... .
T Consensus 105 ~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~-~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~ 182 (260)
T cd05073 105 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTI 182 (260)
T ss_pred HHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC-cEEECCCcceeeccCCCcc-cccCCcccccccCHhHhccCCcCc
Confidence 99999999999999999999999999999997653 4445699987543322111 11112334569999988655 6
Q ss_pred cccccCcceEEEEEE---eeecccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
++|+ |++|++++++ +..||.+
T Consensus 183 ~~Di-~slG~~l~~l~t~g~~p~~~ 206 (260)
T cd05073 183 KSDV-WSFGILLMEIVTYGRIPYPG 206 (260)
T ss_pred cccc-hHHHHHHHHHHhcCCCCCCC
Confidence 7899 9999999987 4567753
No 356
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.87 E-value=1.3e-22 Score=199.97 Aligned_cols=174 Identities=21% Similarity=0.361 Sum_probs=134.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC--------eEEEEEecCCCCCHHHHHHhCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER--------YVYIILEYCDGGDLCSFIRSHE 73 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--------~~~lv~e~~~g~sL~~~l~~~~ 73 (477)
.+++.||||.+............+.+|+.++++++||||+++++++.... ..++||||+. ++|.+++....
T Consensus 35 ~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~ 113 (310)
T cd07865 35 KTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKN 113 (310)
T ss_pred CCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhcc
Confidence 47899999998765433333445678999999999999999999876543 4699999997 68988887643
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc--cccCCeEEEecccccc
Q psy6508 74 -KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY--IEQGNTKVICSVFEPR 150 (477)
Q Consensus 74 -~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~--~~~g~t~v~~~~y~pp 150 (477)
.+++..++.++.|++.||.|||++|++|+||||+||+++.+. .+.+.|||.+........ ........++..|+||
T Consensus 114 ~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aP 192 (310)
T cd07865 114 VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDG-ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPP 192 (310)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCC-cEEECcCCCcccccCCcccCCCCccCcccCccccCc
Confidence 689999999999999999999999999999999999997653 344459998764332111 0111234566789999
Q ss_pred ccCCCC----CcccccCcceEEEEEE--eeeccc
Q psy6508 151 EIPSSK----TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 151 E~~~~~----~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
|...+. .++|+ ||+|+++|++ +..||.
T Consensus 193 E~~~~~~~~~~~~Di-~slG~~l~el~t~~~~~~ 225 (310)
T cd07865 193 ELLLGERDYGPPIDM-WGAGCIMAEMWTRSPIMQ 225 (310)
T ss_pred HHhcCCcccCchhhh-HHHHHHHHHHHhCCCCCC
Confidence 987553 57899 9999999999 556665
No 357
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.87 E-value=1.3e-22 Score=199.90 Aligned_cols=170 Identities=17% Similarity=0.253 Sum_probs=132.4
Q ss_pred EEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHH
Q psy6508 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFV 84 (477)
Q Consensus 6 ~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~~i~ 84 (477)
.||+|.+.... .......+.+|+.+++.++||||+++++++... ..++++||+++|+|.+++..+. .+++..+..++
T Consensus 38 ~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~ 115 (303)
T cd05110 38 PVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWC 115 (303)
T ss_pred eEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHH
Confidence 57999886543 233345688999999999999999999988654 4679999999999999997754 58999999999
Q ss_pred HHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Ccccc
Q psy6508 85 RQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEY 161 (477)
Q Consensus 85 ~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di 161 (477)
.|++.||.|||++|++||||||+||+++.+. .+.++|||.+....+............+..|+|||...+. .++|+
T Consensus 116 ~qi~~~L~~LH~~~ivH~dikp~Nill~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di 194 (303)
T cd05110 116 VQIAKGMMYLEERRLVHRDLAARNVLVKSPN-HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDV 194 (303)
T ss_pred HHHHHHHHHHhhcCeeccccccceeeecCCC-ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHH
Confidence 9999999999999999999999999997542 3444599988755432211111223344579999987655 67899
Q ss_pred cCcceEEEEEE---eeecccc
Q psy6508 162 QRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 162 ~~s~G~il~e~---~~~Pf~~ 179 (477)
||+|+++||+ +..||.+
T Consensus 195 -wslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 195 -WSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred -HHHHHHHHHHHhCCCCCCCC
Confidence 9999999997 3466653
No 358
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.87 E-value=3.1e-22 Score=195.64 Aligned_cols=172 Identities=24% Similarity=0.311 Sum_probs=137.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHh----CCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRS----HEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~----~~~l 75 (477)
.+++.||+|.+..... .....++.+|++++++++||||+++++++... +.+|+||||++|++|.+++.. ...+
T Consensus 24 ~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l 102 (287)
T cd06621 24 NTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRI 102 (287)
T ss_pred CCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 4688999999875532 34456789999999999999999999988643 478999999999999998753 2458
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
++..+..++.|++.||.|||+.|++|+||+|+||+++.+. .+.++|||.+....... .....++..|+|||...+
T Consensus 103 ~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~~ 177 (287)
T cd06621 103 GEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG-QVKLCDFGVSGELVNSL----AGTFTGTSFYMAPERIQG 177 (287)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC-eEEEeeccccccccccc----cccccCCccccCHHHhcC
Confidence 8999999999999999999999999999999999997643 35556999865432111 112335667999998765
Q ss_pred C---CcccccCcceEEEEEE--eeeccccc
Q psy6508 156 K---TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 156 ~---~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
. .++|+ |++|+++|++ +..||...
T Consensus 178 ~~~~~~~Dv-~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 178 KPYSITSDV-WSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred CCCCchhhH-HHHHHHHHHHHhCCCCCCcc
Confidence 5 57899 9999999999 66777643
No 359
>KOG0665|consensus
Probab=99.87 E-value=3.1e-23 Score=194.21 Aligned_cols=171 Identities=22% Similarity=0.348 Sum_probs=142.5
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC------eEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER------YVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~------~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+++||+|++.....+....++..+|..++..++|+||++++.+|.... .+|+|||++. .+|.+.+.. .++
T Consensus 40 ~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~--elD 116 (369)
T KOG0665|consen 40 LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILM--ELD 116 (369)
T ss_pred ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHH--hcc
Confidence 4788999998887766666778899999999999999999999987443 5899999997 899999884 588
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
...+..+++|++.|++|||+.||+||||||+||+++.+. .+...|||.+...+.. -.-...+.+..|.+||+..+.
T Consensus 117 H~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~-~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~ 192 (369)
T KOG0665|consen 117 HETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC-TLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGM 192 (369)
T ss_pred hHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh-heeeccchhhcccCcc---cccCchhheeeccCchheecc
Confidence 999999999999999999999999999999999998753 3334599999776654 122456788899999999876
Q ss_pred ---CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
..+|+ ||.||++-|| +.--|.+..
T Consensus 193 ~~ke~vdi-wSvGci~gEli~~~Vlf~g~d 221 (369)
T KOG0665|consen 193 GYKENVDI-WSVGCIMGELILGTVLFPGKD 221 (369)
T ss_pred CCcccchh-hhhhhHHHHHhhceEEecCch
Confidence 78999 9999999999 444454443
No 360
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.87 E-value=8.4e-23 Score=204.50 Aligned_cols=173 Identities=29% Similarity=0.434 Sum_probs=139.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC-----CeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+|+.||||.+............+.+|+.+++.++||||+++++++... ...|+++||+. ++|.+++...++++
T Consensus 28 ~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~ 106 (337)
T cd07858 28 ETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQTLS 106 (337)
T ss_pred CCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCCCC
Confidence 4789999999876543344455678999999999999999999987643 35899999996 79999998878899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
+..+..++.|++.||.|||++|++||||||+||+++.+. .+.+.|||.+....... ....+..++..|+|||...+.
T Consensus 107 ~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~-~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~ 183 (337)
T cd07858 107 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC-DLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNC 183 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-CEEECcCccccccCCCc--ccccccccccCccChHHHhcC
Confidence 999999999999999999999999999999999997643 34445999876543321 122345667889999976532
Q ss_pred ----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||.+
T Consensus 184 ~~~~~~~Di-wslG~il~~l~~g~~pf~~ 211 (337)
T cd07858 184 SEYTTAIDV-WSVGCIFAELLGRKPLFPG 211 (337)
T ss_pred CCCCCcccH-HHHHHHHHHHHcCCCCCCC
Confidence 67899 9999999998 6677764
No 361
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.87 E-value=7.8e-23 Score=204.41 Aligned_cols=175 Identities=20% Similarity=0.306 Sum_probs=138.9
Q ss_pred CCCcEEEEEEcccCCCChh------------HHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSEN------------RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFI 69 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~------------~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l 69 (477)
.+++.||||++........ ....+.+|+.++++++||||+++++++..++..|++|||++ ++|.+++
T Consensus 32 ~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l 110 (335)
T PTZ00024 32 LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVV 110 (335)
T ss_pred CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHH
Confidence 4688999999876543221 01247799999999999999999999999999999999997 7999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc------------cc
Q psy6508 70 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI------------EQ 137 (477)
Q Consensus 70 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~------------~~ 137 (477)
.....+++..+..++.|++.||.|||++|++||||+|+||+++.+. .+.+.|||.+.....+.+. ..
T Consensus 111 ~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (335)
T PTZ00024 111 DRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG-ICKIADFGLARRYGYPPYSDTLSKDETMQRREE 189 (335)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC-CEEECCccceeeccccccccccccccccccccc
Confidence 8877899999999999999999999999999999999999997653 3344599987654311110 11
Q ss_pred CCeEEEeccccccccCCCC----CcccccCcceEEEEEE--eeecccc
Q psy6508 138 GNTKVICSVFEPREIPSSK----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 138 g~t~v~~~~y~ppE~~~~~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.....++..|.|||...+. .++|+ |++|++++++ +..||.+
T Consensus 190 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~~l~el~tg~~p~~~ 236 (335)
T PTZ00024 190 MTSKVVTLWYRAPELLMGAEKYHFAVDM-WSVGCIFAELLTGKPLFPG 236 (335)
T ss_pred ccccccccCCCCChhcccCCCCCcHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 1223456789999987653 57899 9999999999 6677764
No 362
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.87 E-value=3.8e-23 Score=217.54 Aligned_cols=148 Identities=22% Similarity=0.264 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHH
Q psy6508 21 RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-----KLSEFQCQQFVRQLVLALKFLR 95 (477)
Q Consensus 21 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH 95 (477)
....+.+|+.+|++++||||+++++++...+..|++++++. ++|..++.... ......++.++.|++.||.|||
T Consensus 206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH 284 (501)
T PHA03210 206 AAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH 284 (501)
T ss_pred HHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999996 78888775431 2346678899999999999999
Q ss_pred hCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE
Q psy6508 96 ENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF 172 (477)
Q Consensus 96 ~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~ 172 (477)
++||+||||||+|||++.+. ++.++|||++........ ....+.+++..|+|||.+.+. .++|+ ||+|+++|||
T Consensus 285 ~~gIiHrDLKP~NILl~~~~-~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvil~el 361 (501)
T PHA03210 285 DKKLIHRDIKLENIFLNCDG-KIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDI-WSCGLILLDM 361 (501)
T ss_pred hCCeecCCCCHHHEEECCCC-CEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHH-HHHHHHHHHH
Confidence 99999999999999997643 344569999865432211 112235688899999998766 67899 9999999999
No 363
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.87 E-value=1.1e-22 Score=196.43 Aligned_cols=172 Identities=22% Similarity=0.380 Sum_probs=136.4
Q ss_pred CCcEEEEEEcccCCC--------ChhHHHHHHHHHHHHHh-cCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh--
Q psy6508 3 QHTEVAIKCIDKTKV--------SENRFDSIVNEIKALKL-LHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-- 71 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~--------~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-- 71 (477)
+++.+|+|.+..... ......++.+|+.++.+ ++||||+++++.+...+..+++|||++|++|.+++..
T Consensus 25 ~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~ 104 (269)
T cd08528 25 GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLK 104 (269)
T ss_pred CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHH
Confidence 468899998864421 22344567889998875 6999999999999999999999999999999998743
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccc
Q psy6508 72 --HEKLSEFQCQQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFE 148 (477)
Q Consensus 72 --~~~l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ 148 (477)
...+++..++.++.|++.||.|||+ .|++|+||+|+||+++.+. .+.+.|||.+....... ......++..|.
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~ 180 (269)
T cd08528 105 EKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD-KVTITDFGLAKQKQPES---KLTSVVGTILYS 180 (269)
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC-cEEEecccceeeccccc---ccccccCcccCc
Confidence 3468999999999999999999996 7899999999999997643 33445999886543221 112345667899
Q ss_pred ccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 149 PREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 149 ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
|||...+. .++|+ ||+|+++|++ +..||..
T Consensus 181 ~Pe~~~~~~~~~~~Dv-~slG~ll~~l~~g~~p~~~ 215 (269)
T cd08528 181 CPEIVKNEPYGEKADV-WAFGCILYQMCTLQPPFYS 215 (269)
T ss_pred ChhhhcCCCCchHHHH-HHHHHHHHHHHhCCCcccc
Confidence 99998765 67899 9999999999 5677753
No 364
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.87 E-value=2.1e-22 Score=195.76 Aligned_cols=170 Identities=24% Similarity=0.387 Sum_probs=134.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhC-CCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSH-EKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~-~~l~~ 77 (477)
.+++.||+|+++....+... ....+|+.+++++. |||++++++++.++ +.+++||||++ ++|.+++... ..+++
T Consensus 22 ~~~~~~aik~~~~~~~~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~ 99 (282)
T cd07831 22 KTGKYYAIKCMKKHFKSLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPE 99 (282)
T ss_pred CCCcEEEEEEehhccCCchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCH
Confidence 46889999998765433322 33457999999995 99999999999887 88999999997 6888888763 46899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
..+..++.|++.||.|||++|++||||||+||+++.+.+ .+.|||.+........ .....++..|+|||.....
T Consensus 100 ~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~--kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~ 174 (282)
T cd07831 100 KRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDIL--KLADFGSCRGIYSKPP---YTEYISTRWYRAPECLLTDG 174 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCe--EEEecccccccccCCC---cCCCCCCcccCChhHhhcCC
Confidence 999999999999999999999999999999999988444 4459998865433221 1223456789999975432
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++||+ +..||.+
T Consensus 175 ~~~~~~Di-~slGv~l~el~~~~~p~~~ 201 (282)
T cd07831 175 YYGPKMDI-WAVGCVFFEILSLFPLFPG 201 (282)
T ss_pred CCCcchhH-HHHHHHHHHHHcCCcCCCC
Confidence 67899 9999999999 5677764
No 365
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.87 E-value=9.2e-23 Score=203.92 Aligned_cols=175 Identities=26% Similarity=0.359 Sum_probs=139.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe----CCeEEEEEecCCCCCHHHHHHhCCCCCH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD----ERYVYIILEYCDGGDLCSFIRSHEKLSE 77 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~~l~~ 77 (477)
++|+.||+|++............+.+|+.+|++++||||+++++++.. ....|+||||+. ++|.+++...+.+++
T Consensus 28 ~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~ 106 (334)
T cd07855 28 RSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLTE 106 (334)
T ss_pred CCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCCCCH
Confidence 468999999987654444455678899999999999999999998763 357899999996 799999987778999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc--cccCCeEEEeccccccccCCC
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY--IEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~--~~~g~t~v~~~~y~ppE~~~~ 155 (477)
..+..++.|++.||.|||++|++||||||+||+++.+. ++.++|||.+........ .....+..++..|.|||...+
T Consensus 107 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 185 (334)
T cd07855 107 EHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC-ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLS 185 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-cEEecccccceeecccCcCCCcccccccccccccChHHhcC
Confidence 99999999999999999999999999999999997643 344459998754322111 111123467778999998654
Q ss_pred C----CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ |++|+++|++ +..||.+
T Consensus 186 ~~~~~~~~Di-~slG~~l~el~~g~~pf~~ 214 (334)
T cd07855 186 LPEYTTAIDM-WSVGCIFAEMLGRRQLFPG 214 (334)
T ss_pred Ccccccccch-HHHHHHHHHHHcCCCccCC
Confidence 2 67899 9999999998 6677764
No 366
>KOG0196|consensus
Probab=99.87 E-value=5.3e-22 Score=204.18 Aligned_cols=171 Identities=24% Similarity=0.317 Sum_probs=140.2
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQ 82 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~ 82 (477)
-..||||.++.. .+++.+.+|+.|..||-+++||||+++-|+......+.||+|||++|+|..+|+.+ +.++.-++..
T Consensus 657 e~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVg 735 (996)
T KOG0196|consen 657 EITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVG 735 (996)
T ss_pred ceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHH
Confidence 357999998654 46778889999999999999999999999999999999999999999999999876 4799999999
Q ss_pred HHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecc-cCC-cccccCCeEEEeccccccccCCCC---C
Q psy6508 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA-KGS-AYIEQGNTKVICSVFEPREIPSSK---T 157 (477)
Q Consensus 83 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~-~gs-~~~~~g~t~v~~~~y~ppE~~~~~---~ 157 (477)
+++.|+.|++||-+.|+|||||...|||++.| +..+..|||+++.. +++ ++......+ +.-.|.|||.+.-+ .
T Consensus 736 MLrGIAsGMkYLsdm~YVHRDLAARNILVNsn-LvCKVsDFGLSRvledd~~~~ytt~GGK-IPiRWTAPEAIa~RKFTs 813 (996)
T KOG0196|consen 736 MLRGIASGMKYLSDMNYVHRDLAARNILVNSN-LVCKVSDFGLSRVLEDDPEAAYTTLGGK-IPIRWTAPEAIAYRKFTS 813 (996)
T ss_pred HHHHHHHHhHHHhhcCchhhhhhhhheeeccc-eEEEeccccceeecccCCCccccccCCc-cceeecChhHhhhcccCc
Confidence 99999999999999999999999999999987 34444599999754 222 111111112 12348999987655 7
Q ss_pred cccccCcceEEEEEE---eeeccc
Q psy6508 158 SLEYQRSKGELYVEF---KFAPFA 178 (477)
Q Consensus 158 ~~Di~~s~G~il~e~---~~~Pf~ 178 (477)
++|+ ||+|+++||+ |-.||-
T Consensus 814 ASDV-WSyGIVmWEVmSyGERPYW 836 (996)
T KOG0196|consen 814 ASDV-WSYGIVMWEVMSYGERPYW 836 (996)
T ss_pred hhhc-cccceEEEEecccCCCccc
Confidence 7899 9999999999 445654
No 367
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.87 E-value=1.1e-22 Score=197.84 Aligned_cols=174 Identities=26% Similarity=0.369 Sum_probs=139.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhC-CCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSH-EKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~-~~l~~~ 78 (477)
.+|+.||+|.+..........+.+.+|+.+++.++|||++++++++... +..++|+||++ ++|.+++... ..+++.
T Consensus 22 ~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~ 100 (287)
T cd07840 22 KTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPEVKFTES 100 (287)
T ss_pred CCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc-ccHHHHHhccCCCCCHH
Confidence 3578999999987653344456788999999999999999999999887 89999999998 5999988765 479999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.+..++.|++.||.|||++|++|+||+|+||+++++. .+.+.|||.+........ .......++..|+|||...+.
T Consensus 101 ~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~-~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~ 178 (287)
T cd07840 101 QIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG-VLKLADFGLARPYTKRNS-ADYTNRVITLWYRPPELLLGATR 178 (287)
T ss_pred HHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC-CEEEccccceeeccCCCc-ccccccccccccCCceeeEcccc
Confidence 9999999999999999999999999999999998643 334459998865543321 111224556789999976543
Q ss_pred --CcccccCcceEEEEEE--eeecccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 179 ~~~~~Dv-~slG~~l~el~t~~~p~~~ 204 (287)
T cd07840 179 YGPEVDM-WSVGCILAELFLGKPIFQG 204 (287)
T ss_pred CChHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6667653
No 368
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.87 E-value=2.5e-22 Score=201.00 Aligned_cols=172 Identities=27% Similarity=0.360 Sum_probs=136.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
.+|+.||+|++............+.+|+.+++++ +||||+++++++... ...|+||||++ ++|.+++... .+++.
T Consensus 30 ~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~ 107 (337)
T cd07852 30 RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN-ILEDV 107 (337)
T ss_pred CCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC-CCCHH
Confidence 3688999999866544444456788999999999 999999999988643 46899999997 6999998775 78899
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCccc---ccCCeEEEeccccccccCC
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYI---EQGNTKVICSVFEPREIPS 154 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~---~~g~t~v~~~~y~ppE~~~ 154 (477)
.+..++.|++.||.|||++||+||||||+||+++.+ .+++ .|||.+......... ......+++..|+|||...
T Consensus 108 ~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl--~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 185 (337)
T cd07852 108 HKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKL--ADFGLARSLSELEENPENPVLTDYVATRWYRAPEILL 185 (337)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEE--eeccchhccccccccccCcchhcccccccccCceeee
Confidence 999999999999999999999999999999999765 4555 489987643322111 1112345677899999765
Q ss_pred CC----CcccccCcceEEEEEE--eeeccc
Q psy6508 155 SK----TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 155 ~~----~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
+. .++|+ ||+|+++|++ +..||.
T Consensus 186 ~~~~~~~~sDi-~slG~~l~el~tg~~pf~ 214 (337)
T cd07852 186 GSTRYTKGVDM-WSVGCILGEMLLGKPLFP 214 (337)
T ss_pred ccccccccchH-HHHHHHHHHHHhCCCCCC
Confidence 43 67899 9999999999 666665
No 369
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.87 E-value=2.1e-22 Score=199.48 Aligned_cols=169 Identities=20% Similarity=0.353 Sum_probs=136.6
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.+|+.|++|.+..... .....+.+.+|+.+++.++|||++++++++.+....|++|||+. ++|.+++.. ..++++..
T Consensus 44 ~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~ 122 (313)
T cd06633 44 HTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVE 122 (313)
T ss_pred CCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCCCCCHHH
Confidence 4688999999876543 33445678899999999999999999999999999999999997 688887765 34689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC---C
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS---K 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~---~ 156 (477)
+..++.|++.||.|||++|++||||+|+||+++.+. .+.++|||.+.... ..++..++..|+|||.... .
T Consensus 123 ~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~-~~kL~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~ 195 (313)
T cd06633 123 IAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG-QVKLADFGSASKSS------PANSFVGTPYWMAPEVILAMDEG 195 (313)
T ss_pred HHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC-CEEEeecCCCcccC------CCCCccccccccChhhccccCCC
Confidence 999999999999999999999999999999997643 23445888764321 1234566778999998732 1
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||..
T Consensus 196 ~~~~~sDv-~slGvil~el~~g~~p~~~ 222 (313)
T cd06633 196 QYDGKVDV-WSLGITCIELAERKPPLFN 222 (313)
T ss_pred CCCchhhH-HHHHHHHHHHHhCCCCCCC
Confidence 56899 9999999999 6677754
No 370
>KOG1027|consensus
Probab=99.87 E-value=2.3e-22 Score=208.61 Aligned_cols=171 Identities=26% Similarity=0.326 Sum_probs=141.1
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-C---CCH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-K---LSE 77 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~---l~~ 77 (477)
.|+.||||.+-.+ ...-..+|+..|+.- +||||+++|+.-.++...||..|.|. .+|.++++... . ...
T Consensus 532 e~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~ 605 (903)
T KOG1027|consen 532 EGREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSD 605 (903)
T ss_pred CCceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhccc
Confidence 4789999987543 334567999999988 69999999999889999999999998 89999998741 1 112
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc----CcceeecccccceecccCC-cccccCCeEEEecccccccc
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN----NTLKLAGLKQGVSEKAKGS-AYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~----~~~rl~~~dfG~~~~~~gs-~~~~~g~t~v~~~~y~ppE~ 152 (477)
...+..+.|+++||++||+.+||||||||+||||.. +.+|..+.|||++++..+. .-+..-.+..|+..|.|||+
T Consensus 606 i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~ 685 (903)
T KOG1027|consen 606 IDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQ 685 (903)
T ss_pred ccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHH
Confidence 445788999999999999999999999999999964 5688899999999875543 22333456778889999999
Q ss_pred CCCC---CcccccCcceEEEEEE---eeeccccc
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF---KFAPFASQ 180 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~---~~~Pf~~~ 180 (477)
+... .++|+ +++||++|.+ |..||.+.
T Consensus 686 L~~~~~~~avDi-FslGCvfyYvltgG~HpFGd~ 718 (903)
T KOG1027|consen 686 LREDRKTQAVDI-FSLGCVFYYVLTGGSHPFGDS 718 (903)
T ss_pred HhccccCcccch-hhcCceEEEEecCCccCCCch
Confidence 9876 77899 9999999998 67899753
No 371
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.87 E-value=2.2e-22 Score=195.53 Aligned_cols=173 Identities=27% Similarity=0.382 Sum_probs=140.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
.+|+.+++|.++.....+.....+.+|+.++++++||||+++++++..++..++++||++ ++|.+++... ..+++..+
T Consensus 22 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~l~~~~~~~~~~~~ 100 (283)
T cd05118 22 LTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-TDLYKLIKDRQRGLPESLI 100 (283)
T ss_pred CCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC-CCHHHHHHhhcccCCHHHH
Confidence 478899999987766554556788899999999999999999999999999999999998 5888888763 57899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.|++.||.|||++|++|+||||+||+++.+. .+.+.|||.+....... .......++..|.|||...+.
T Consensus 101 ~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~-~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~ 177 (283)
T cd05118 101 KSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG-VLKLADFGLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYS 177 (283)
T ss_pred HHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC-cEEEeeeeeeEecCCCc--ccccCccCcccccCcHHHhcCCCCC
Confidence 99999999999999999999999999999998642 33445999876543322 111224566789999987544
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|++++++ +..||..
T Consensus 178 ~~~Di-~slG~~l~~l~tg~~~~~~ 201 (283)
T cd05118 178 TPVDI-WSVGCIFAELLSRRPLFPG 201 (283)
T ss_pred chhHH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6666653
No 372
>KOG0587|consensus
Probab=99.87 E-value=2.6e-21 Score=201.73 Aligned_cols=171 Identities=25% Similarity=0.391 Sum_probs=142.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEe-----CCeEEEEEecCCCCCHHHHHHhC--C
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWD-----ERYVYIILEYCDGGDLCSFIRSH--E 73 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~-----~~~~~lv~e~~~g~sL~~~l~~~--~ 73 (477)
++|+.+|+|++....- ..+++.-|..+|+.+ .|||++.+|++|.. .+.+|||||||.|||..+++++. .
T Consensus 42 ~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~ 118 (953)
T KOG0587|consen 42 KTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGN 118 (953)
T ss_pred ecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhccc
Confidence 4678889998765542 335677899999998 79999999999863 45899999999999999999764 4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
++.|..+..|++.++.||.+||.+.++|||+|-.|||++.+ ++++ +|||++...+... ..-+|.+||+.||+||+
T Consensus 119 rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKL--vDFGvSaQldsT~--grRnT~iGtP~WMAPEV 194 (953)
T KOG0587|consen 119 RLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKL--VDFGVSAQLDSTV--GRRNTFIGTPYWMAPEV 194 (953)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEE--eeeeeeeeeeccc--ccccCcCCCccccccee
Confidence 78999999999999999999999999999999999999764 5555 5999997766443 34578999999999999
Q ss_pred CCCC--------CcccccCcceEEEEEE--eeeccccc
Q psy6508 153 PSSK--------TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 153 ~~~~--------~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.... ..+|+ ||+|++..|| +-+|+...
T Consensus 195 iac~e~~d~tyd~R~D~-WsLGITaIEladG~PPl~Dm 231 (953)
T KOG0587|consen 195 IACDESPDATYDYRSDL-WSLGITAIEMAEGAPPLCDM 231 (953)
T ss_pred eecccCCCCCcccccch-hhccceeehhcCCCCCccCc
Confidence 8765 45789 9999999999 55777653
No 373
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.86 E-value=1.6e-22 Score=201.63 Aligned_cols=175 Identities=29% Similarity=0.385 Sum_probs=142.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC-----eEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-----YVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-----~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+++.||||++..........+.+.+|+.+++.++||||+++++++.... .+|++|||++ ++|.+++.+...++
T Consensus 23 ~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~ 101 (330)
T cd07834 23 RTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQPLT 101 (330)
T ss_pred CCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCCCCC
Confidence 35889999998765443445577999999999999999999999987765 7899999998 68999998877899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc-cccCCeEEEeccccccccCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY-IEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~-~~~g~t~v~~~~y~ppE~~~~ 155 (477)
+..+..++.|++.||.|||++|++||||||+||+++.+ .++.++|||.+........ ........++..|.|||...+
T Consensus 102 ~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~-~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 180 (330)
T cd07834 102 DDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN-CDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLS 180 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC-CCEEEcccCceEeecccccccccccccccccCcCCceeeec
Confidence 99999999999999999999999999999999999876 3455569998875443221 011223456778999998765
Q ss_pred C----CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ |++|++++++ +..||.+
T Consensus 181 ~~~~~~~sDi-~slG~il~~l~~g~~pf~~ 209 (330)
T cd07834 181 SSRYTKAIDI-WSVGCIFAELLTRKPLFPG 209 (330)
T ss_pred ccCCCcchhH-HHHHHHHHHHHcCCCCcCC
Confidence 4 57899 9999999999 6677764
No 374
>KOG0603|consensus
Probab=99.86 E-value=8.7e-23 Score=207.16 Aligned_cols=165 Identities=30% Similarity=0.417 Sum_probs=136.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.+++|++.+... +..+|+.++... +||||+++.+.+.+..+.|+|||.+.|+-|.+.+...+.+. .++
T Consensus 345 ~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~ 417 (612)
T KOG0603|consen 345 PTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEA 417 (612)
T ss_pred ccccchhheecccccc------ccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHH
Confidence 4677888999876632 134678776666 79999999999999999999999999998888887754444 788
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeec-c-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIK-N-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~-~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
..|+.+|+.|+.|||++|++||||||+|||++ + +.+|++ |||..+....+ -.+...|..|.|||+....
T Consensus 418 ~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrlt--yFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~y 490 (612)
T KOG0603|consen 418 SQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLT--YFGFWSELERS-----CDTPALTLQYVAPEVLAIQEY 490 (612)
T ss_pred HHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEE--EechhhhCchh-----hcccchhhcccChhhhccCCC
Confidence 88999999999999999999999999999994 3 457776 89987665544 2456778889999998866
Q ss_pred -CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
+++|+ ||+|+++|+| |+.||....
T Consensus 491 t~acD~-WSLGvlLy~ML~G~tp~~~~P 517 (612)
T KOG0603|consen 491 TEACDW-WSLGVLLYEMLTGRTLFAAHP 517 (612)
T ss_pred Ccchhh-HHHHHHHHHHHhCCCccccCC
Confidence 88999 9999999999 889998644
No 375
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.86 E-value=1.1e-21 Score=193.79 Aligned_cols=169 Identities=20% Similarity=0.310 Sum_probs=136.3
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.+++.||+|.+..... .....+++.+|+.+++.++|||++++++++..+...|+||||+. ++|.+++.. ...+++..
T Consensus 38 ~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~ 116 (308)
T cd06634 38 RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVE 116 (308)
T ss_pred CCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHH
Confidence 3678899999875432 33445678899999999999999999999999999999999997 688887754 34689999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC----
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS---- 155 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~---- 155 (477)
+..++.|++.||.|||++|++||||+|+||+++.+. ++...|||.+..... .....++..|+|||...+
T Consensus 117 ~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~ 189 (308)
T cd06634 117 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG-LVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEG 189 (308)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC-cEEECCcccceeecC------cccccCCccccCHHHHhhcccC
Confidence 999999999999999999999999999999997643 344569998754321 223456678999998631
Q ss_pred --CCcccccCcceEEEEEE--eeecccc
Q psy6508 156 --KTSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 --~~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
..++|+ ||+|++++++ +..||..
T Consensus 190 ~~~~~~Di-~slG~il~el~~g~~p~~~ 216 (308)
T cd06634 190 QYDGKVDV-WSLGITCIELAERKPPLFN 216 (308)
T ss_pred CCCcccch-HHHHHHHHHHHcCCCCCcc
Confidence 167899 9999999999 6677753
No 376
>KOG2052|consensus
Probab=99.86 E-value=2.4e-22 Score=195.44 Aligned_cols=162 Identities=17% Similarity=0.260 Sum_probs=134.3
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc--CCCCccceEEEEEeC----CeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDE----RYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l--~HpnIv~~~~~~~~~----~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
-|+.||||++... ..+.+.+|.+|.+.+ +|+||+.+++.-..+ .++|||++|.+.|||.+||.+ ..++
T Consensus 233 rGe~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~ 306 (513)
T KOG2052|consen 233 RGEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVT 306 (513)
T ss_pred cCCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCC
Confidence 3789999998644 235688999999875 999999999875433 268999999999999999998 5799
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--------CcEEccCCCCceeeccCcceeecccccceecccCC-ccc-ccCCeEEEecc
Q psy6508 77 EFQCQQFVRQLVLALKFLREN--------NVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGS-AYI-EQGNTKVICSV 146 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~--------givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs-~~~-~~g~t~v~~~~ 146 (477)
.....+++..++.||.+||.. .|.|||||..|||+..|..-. +.|+|++...+.. ... ...+.++||..
T Consensus 307 ~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~-IADLGLAv~h~~~t~~idi~~N~rVGTKR 385 (513)
T KOG2052|consen 307 TEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC-IADLGLAVRHDSDTDTIDIPPNPRVGTKR 385 (513)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE-EeeceeeEEecccCCcccCCCCCccceee
Confidence 999999999999999999962 599999999999998875433 3799998754433 222 34567999999
Q ss_pred ccccccCCCC---------CcccccCcceEEEEEE
Q psy6508 147 FEPREIPSSK---------TSLEYQRSKGELYVEF 172 (477)
Q Consensus 147 y~ppE~~~~~---------~~~Di~~s~G~il~e~ 172 (477)
|||||++... ..+|| |++|.++||+
T Consensus 386 YMAPEvLdetin~~~Fesyk~ADI-YafgLVlWEi 419 (513)
T KOG2052|consen 386 YMAPEVLDETINMKHFESYKRADI-YAFGLVLWEI 419 (513)
T ss_pred ccChHHhhhhcChhhhhhhhHHHH-HHHHHHHHHH
Confidence 9999998776 45899 9999999998
No 377
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.86 E-value=2e-22 Score=202.24 Aligned_cols=173 Identities=26% Similarity=0.372 Sum_probs=136.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--------------CeEEEEEecCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--------------RYVYIILEYCDGGDLCS 67 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--------------~~~~lv~e~~~g~sL~~ 67 (477)
++|+.||+|.+..... ...+.+.+|+.++++++||||+++++.+... ...|++|||++ ++|.+
T Consensus 28 ~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~ 104 (342)
T cd07854 28 DCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLAN 104 (342)
T ss_pred CCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHH
Confidence 4788999999866543 3456788999999999999999999876543 35899999997 69998
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccc-cCCeEEEecc
Q psy6508 68 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIE-QGNTKVICSV 146 (477)
Q Consensus 68 ~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~-~g~t~v~~~~ 146 (477)
++.. +.+++..++.++.|++.||.|||++|++||||||+||+++.++..+...|||.+.......... ......++..
T Consensus 105 ~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 183 (342)
T cd07854 105 VLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKW 183 (342)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccccccccccccccc
Confidence 8865 4799999999999999999999999999999999999998655455566999876543221100 1122356778
Q ss_pred ccccccCCCC----CcccccCcceEEEEEE--eeecccc
Q psy6508 147 FEPREIPSSK----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 147 y~ppE~~~~~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
|.|||...+. .++|+ ||+|+++|++ +..||.+
T Consensus 184 y~aPE~~~~~~~~~~~~Di-wSlGvil~el~~g~~pf~~ 221 (342)
T cd07854 184 YRSPRLLLSPNNYTKAIDM-WAAGCIFAEMLTGKPLFAG 221 (342)
T ss_pred ccCHHHHhCccccCchhhH-HHHHHHHHHHHhCCCCCCC
Confidence 9999976442 57899 9999999999 6678864
No 378
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.86 E-value=7.4e-22 Score=198.36 Aligned_cols=169 Identities=22% Similarity=0.359 Sum_probs=135.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC------CeEEEEEecCCCCCHHHHHHhCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE------RYVYIILEYCDGGDLCSFIRSHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------~~~~lv~e~~~g~sL~~~l~~~~~l 75 (477)
.+|+.||+|++..........+.+.+|+.++++++||||+++++++... +..|++++++ |++|.+++.. ..+
T Consensus 40 ~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-~~l 117 (345)
T cd07877 40 KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-QKL 117 (345)
T ss_pred CCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc-CCC
Confidence 4788999999876544444456788999999999999999999987643 3478999987 6899988865 469
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
++..+..++.|++.||+|||++|++||||||+||+++.+. .+.+.|||.+...... .....++..|+|||...+
T Consensus 118 ~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~-~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~ 191 (345)
T cd07877 118 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLN 191 (345)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCC-CEEEeccccccccccc-----ccccccCCCccCHHHHhC
Confidence 9999999999999999999999999999999999997653 3444599987654321 123456778999998654
Q ss_pred C----CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ |++|++++++ +..||..
T Consensus 192 ~~~~~~~~Dv-wslG~il~el~~g~~pf~~ 220 (345)
T cd07877 192 WMHYNQTVDI-WSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred ccCCCchhhH-HHHHHHHHHHHhCCCCCCC
Confidence 2 67899 9999999999 6667753
No 379
>KOG0664|consensus
Probab=99.86 E-value=2.9e-24 Score=196.70 Aligned_cols=188 Identities=22% Similarity=0.319 Sum_probs=148.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC-----eEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-----YVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-----~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+|+.||+|++..-..+-...+++.+|.++|..++|.|++..+++.+..+ .+|+++|.+. .+|...+-....++
T Consensus 76 RdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVSPQ~Ls 154 (449)
T KOG0664|consen 76 RSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVSPQALT 154 (449)
T ss_pred CCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheeccCCCCC
Confidence 47999999998766555555678999999999999999999999876543 4689999997 89999888878899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~ 156 (477)
...++-+++||+.||+|||+.||.||||||.|+|+++|- .+.++|||+++.-+.... ..-...+.|..|.+||.+.|.
T Consensus 155 ~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC-vLKICDFGLARvee~d~~-~hMTqEVVTQYYRAPEiLMGa 232 (449)
T KOG0664|consen 155 PDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC-ILKICDFGLARTWDQRDR-LNMTHEVVTQYYRAPELLMGA 232 (449)
T ss_pred cchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc-eEEecccccccccchhhh-hhhHHHHHHHHhccHHHhhcc
Confidence 999999999999999999999999999999999999874 566689999875432211 111235777889999999887
Q ss_pred ----CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHH
Q psy6508 157 ----TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLK 199 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~ 199 (477)
.++|+ ||.||++-|+. .+|-.+....+..++..++.
T Consensus 233 RhYs~AvDi-WSVGCIFaELL------gRrILFQAq~PiqQL~lItd 272 (449)
T KOG0664|consen 233 RRYTGAVDI-WSVGCIFAELL------QRKILFQAAGPIEQLQMIID 272 (449)
T ss_pred hhhcCccce-ehhhHHHHHHH------hhhhhhhccChHHHHHHHHH
Confidence 67899 99999999983 22223334444455544443
No 380
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.86 E-value=4.1e-22 Score=200.02 Aligned_cols=169 Identities=24% Similarity=0.378 Sum_probs=136.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCC------eEEEEEecCCCCCHHHHHHhCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER------YVYIILEYCDGGDLCSFIRSHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~------~~~lv~e~~~g~sL~~~l~~~~~l 75 (477)
.+|+.||+|++..........+.+.+|+.++++++||||+++++++.... .+++||||+ |++|.+++.. ..+
T Consensus 38 ~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l 115 (343)
T cd07880 38 RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-EKL 115 (343)
T ss_pred CCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-CCC
Confidence 46889999998765444445567889999999999999999999987543 469999998 6899988865 579
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
++..++.++.|++.||.|||+.||+||||||+||+++.+. ++.+.|||.+....... ....++..|+|||...+
T Consensus 116 ~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~-~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~ 189 (343)
T cd07880 116 SEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC-ELKILDFGLARQTDSEM-----TGYVVTRWYRAPEVILN 189 (343)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEEEeecccccccccCc-----cccccCCcccCHHHHhC
Confidence 9999999999999999999999999999999999997643 34445999876543221 22345678999998754
Q ss_pred C----CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ |++|++++++ +..||.+
T Consensus 190 ~~~~~~~~Di-~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 190 WMHYTQTVDI-WSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred CCCCCcHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 2 67899 9999999998 6677764
No 381
>KOG3653|consensus
Probab=99.86 E-value=2.1e-22 Score=197.17 Aligned_cols=160 Identities=20% Similarity=0.313 Sum_probs=133.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc--CCCCccceEEEEEeCC----eEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDER----YVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l--~HpnIv~~~~~~~~~~----~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
+++.||||+++. ...+.|.+|..|.+.. +|+||++++++-.... .+|||++|.+.|+|.+||+.+ .++
T Consensus 232 ~~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n-tis 305 (534)
T KOG3653|consen 232 DNRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN-TIS 305 (534)
T ss_pred cCceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc-ccc
Confidence 468999999864 3456788898888754 8999999999866544 799999999999999999985 799
Q ss_pred HHHHHHHHHHHHHHHHHHHh---------CCcEEccCCCCceeeccCcceeecccccceecccCCcccccCC--eEEEec
Q psy6508 77 EFQCQQFVRQLVLALKFLRE---------NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGN--TKVICS 145 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~---------~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~--t~v~~~ 145 (477)
+....+++..++.||+|||+ ..|+|||||.+|||+.+|- ...+.|||++......- ..|. ..+||.
T Consensus 306 w~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl-TccIaDFGLAl~~~p~~--~~~d~~~qVGT~ 382 (534)
T KOG3653|consen 306 WNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL-TCCIADFGLALRLEPGK--PQGDTHGQVGTR 382 (534)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC-cEEeeccceeEEecCCC--CCcchhhhhhhh
Confidence 99999999999999999996 3699999999999998764 33447999998765322 2333 389999
Q ss_pred cccccccCCCC---------CcccccCcceEEEEEE
Q psy6508 146 VFEPREIPSSK---------TSLEYQRSKGELYVEF 172 (477)
Q Consensus 146 ~y~ppE~~~~~---------~~~Di~~s~G~il~e~ 172 (477)
.|||||++.+. ...|+ |++|.+++|+
T Consensus 383 RYMAPEvLEgainl~d~~Afkr~Dv-YamgLVLWEi 417 (534)
T KOG3653|consen 383 RYMAPEVLEGAINLQDRDAFKRIDV-YAMGLVLWEI 417 (534)
T ss_pred hhcCHHHHhhhcccccHHHHHHHHH-HHHHHHHHHH
Confidence 99999998876 45799 9999999999
No 382
>KOG0696|consensus
Probab=99.86 E-value=2.5e-23 Score=200.07 Aligned_cols=173 Identities=21% Similarity=0.310 Sum_probs=144.4
Q ss_pred CCCcEEEEEEcccCCCC-hhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVS-ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+.+.||||+++++-+- ++..+--+.|-++|... +-|++++++.+|+.-+.+|+||||+.||+|--.++.-+++.+..
T Consensus 372 gtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~ 451 (683)
T KOG0696|consen 372 GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPV 451 (683)
T ss_pred CcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCch
Confidence 35678999999987653 33444456788888876 67899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
+..++.+|+.||-|||++||++||||.+|||++.+ .+++ .|||.+...--. -....|..+|+-|++||+..-+
T Consensus 452 AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi--~DFGmcKEni~~--~~TTkTFCGTPdYiAPEIi~YqPY 527 (683)
T KOG0696|consen 452 AVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKI--ADFGMCKENIFD--GVTTKTFCGTPDYIAPEIIAYQPY 527 (683)
T ss_pred hhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEe--eecccccccccC--CcceeeecCCCcccccceEEeccc
Confidence 99999999999999999999999999999999875 4555 599998632111 1223467888899999998765
Q ss_pred -CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++||| +.+||.+
T Consensus 528 gksvDW-Wa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 528 GKSVDW-WAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred ccchhH-HHHHHHHHHHHcCCCCCCC
Confidence 77899 9999999999 7788874
No 383
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.86 E-value=1.9e-21 Score=189.27 Aligned_cols=170 Identities=25% Similarity=0.335 Sum_probs=135.3
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc---CCCCccceEEEEEeCCe-----EEEEEecCCCCCHHHHHHhCC-
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL---HHQHIVTMLDFLWDERY-----VYIILEYCDGGDLCSFIRSHE- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~~~~~~~~~~~-----~~lv~e~~~g~sL~~~l~~~~- 73 (477)
+++.||+|.++...........+.+|+.+++++ +|||++++++++..... .+++|||+. ++|.+++....
T Consensus 23 ~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~ 101 (287)
T cd07838 23 TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPK 101 (287)
T ss_pred CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccC
Confidence 588999999976654444445677888887766 59999999999987776 999999997 68999887643
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEecccccccc
Q psy6508 74 -KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREI 152 (477)
Q Consensus 74 -~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~ 152 (477)
.+++..++.++.|++.||.|||+.|++|+||+|+||+++.+ .++.+.|||.+....... ......++..|.|||.
T Consensus 102 ~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~-~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~PE~ 177 (287)
T cd07838 102 PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSD-GQVKIADFGLARIYSFEM---ALTSVVVTLWYRAPEV 177 (287)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccC-CCEEEeccCcceeccCCc---ccccccccccccChHH
Confidence 58999999999999999999999999999999999999876 345556999875543211 1122345678999998
Q ss_pred CCCC---CcccccCcceEEEEEE--eeeccc
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
..+. .++|+ |++|++++++ +..||.
T Consensus 178 ~~~~~~~~~~Di-~s~G~~l~~l~~~~~~~~ 207 (287)
T cd07838 178 LLQSSYATPVDM-WSVGCIFAELFRRRPLFR 207 (287)
T ss_pred hccCCCCCcchh-hhHHHHHHHHHhCCCccc
Confidence 8665 67899 9999999998 556665
No 384
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.86 E-value=6e-22 Score=197.59 Aligned_cols=169 Identities=27% Similarity=0.328 Sum_probs=136.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe-CCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD-ERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+|+.||+|.+.+........+.+.+|+.++++++||||+++++++.. .+..|+++||+. ++|.+++.. .++++..+
T Consensus 33 ~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~ 110 (328)
T cd07856 33 LTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTS-RPLEKQFI 110 (328)
T ss_pred CCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhc-CCCCHHHH
Confidence 478899999987654444455678899999999999999999998875 567899999985 799988875 46889999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
..++.|+++||.|||++|++||||+|+||+++.+. .+.++|||.+...... ..+..++..|+|||...+.
T Consensus 111 ~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~-~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~ 184 (328)
T cd07856 111 QYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC-DLKICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYD 184 (328)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC-CEEeCccccccccCCC-----cCCCcccccccCceeeeccCCcC
Confidence 99999999999999999999999999999997642 3444599987543321 1234556789999986542
Q ss_pred CcccccCcceEEEEEE--eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ |++|+++|++ +..||.+
T Consensus 185 ~~~Dv-~slG~il~el~tg~~~f~~ 208 (328)
T cd07856 185 VEVDI-WSAGCIFAEMLEGKPLFPG 208 (328)
T ss_pred cHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 67899 9999999999 6677764
No 385
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.86 E-value=4.8e-22 Score=198.86 Aligned_cols=173 Identities=27% Similarity=0.375 Sum_probs=134.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC-----CeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
.+|+.||+|+++... .......+.+|+.++++++||||+++++++... ...|+++||++ ++|.+++.. ..++
T Consensus 28 ~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~l~ 104 (336)
T cd07849 28 PTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT-QHLS 104 (336)
T ss_pred CCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc-CCCC
Confidence 478999999986432 223446688999999999999999999986543 35899999997 689888865 5799
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc-cccCCeEEEeccccccccCCC
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY-IEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~-~~~g~t~v~~~~y~ppE~~~~ 155 (477)
+..+..++.|++.||.|||++||+||||||+||+++.+. .+.++|||++........ ........++..|+|||...+
T Consensus 105 ~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 183 (336)
T cd07849 105 NDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC-DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLN 183 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC-CEEECcccceeeccccccccCCcCCcCcCCCccChHHhhC
Confidence 999999999999999999999999999999999997642 334459998764332111 111123456778999997643
Q ss_pred C----CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|+++|++ +..||.+
T Consensus 184 ~~~~~~~~Dv-wslGvil~el~~G~~~f~~ 212 (336)
T cd07849 184 SKGYTKAIDI-WSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred CCCCCcHHHH-HHHHHHHHHHHhCCCCCCC
Confidence 2 67899 9999999999 7777764
No 386
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.85 E-value=7.3e-22 Score=197.26 Aligned_cols=173 Identities=25% Similarity=0.308 Sum_probs=135.4
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEe----CCeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWD----ERYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
++.||+|.+..........+.+.+|+.+++++ +||||+++++.+.. ....|++++++. ++|.+++.....+++.
T Consensus 27 ~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~ 105 (332)
T cd07857 27 EETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQPLTDA 105 (332)
T ss_pred CceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCCCCHH
Confidence 78899999875443333456788999999999 59999999987542 246899999986 7999999887789999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccc--ccCCeEEEeccccccccCCCC
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI--EQGNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~--~~g~t~v~~~~y~ppE~~~~~ 156 (477)
.++.++.|++.||.|||++|++||||||+||+++.+. .+.++|||.+......... .......++..|+|||...+.
T Consensus 106 ~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~ 184 (332)
T cd07857 106 HFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC-ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSF 184 (332)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC-CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCC
Confidence 9999999999999999999999999999999997653 3445699988654322111 111234677889999976542
Q ss_pred ----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||.+
T Consensus 185 ~~~~~~~Di-~slGv~l~~l~~g~~pf~~ 212 (332)
T cd07857 185 QSYTKAIDV-WSVGCILAELLGRKPVFKG 212 (332)
T ss_pred CCCCcHHHH-HHHHHHHHHHHhCCcCCCC
Confidence 67899 9999999998 5666653
No 387
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.85 E-value=4.4e-22 Score=196.25 Aligned_cols=175 Identities=26% Similarity=0.369 Sum_probs=134.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC--------CeEEEEEecCCCCCHHHHHHhC-
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--------RYVYIILEYCDGGDLCSFIRSH- 72 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--------~~~~lv~e~~~g~sL~~~l~~~- 72 (477)
.+++.||+|.+............+.+|+.++++++||||+++++.+... ..+|+++||+. ++|...+...
T Consensus 31 ~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~~ 109 (311)
T cd07866 31 KTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLENPS 109 (311)
T ss_pred CCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHHhccc
Confidence 4688999999876544333334677899999999999999999987543 35799999997 6788777653
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccc---------cCCeEEE
Q psy6508 73 EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIE---------QGNTKVI 143 (477)
Q Consensus 73 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~---------~g~t~v~ 143 (477)
..+++..+..++.|+++||.|||++|++||||||+||+++++. .+.+.|||.+.......... ...+.++
T Consensus 110 ~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (311)
T cd07866 110 VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQG-ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVV 188 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-CEEECcCccchhccCCCcccccCCccccccccccee
Confidence 4799999999999999999999999999999999999997653 33445999886443221110 0123456
Q ss_pred eccccccccCCCC----CcccccCcceEEEEEE--eeecccc
Q psy6508 144 CSVFEPREIPSSK----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 144 ~~~y~ppE~~~~~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+..|+|||...+. .++|+ |++|+++|++ +..||.+
T Consensus 189 ~~~y~aPE~~~~~~~~~~~~Dv-~slG~il~el~~g~~~~~~ 229 (311)
T cd07866 189 TRWYRPPELLLGERRYTTAVDI-WGIGCVFAEMFTRRPILQG 229 (311)
T ss_pred ccCcCChHHhhCCCccCchhHh-HHHHHHHHHHHhCCCCCCC
Confidence 7789999986543 66899 9999999999 6666653
No 388
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.85 E-value=1.5e-21 Score=190.64 Aligned_cols=171 Identities=22% Similarity=0.251 Sum_probs=134.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHH-----hCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIR-----SHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~-----~~~~l 75 (477)
.+++.||+|.+...... .....+.+|+.++.++. ||||+++++++..++..+++|||+. ++|.++.. ....+
T Consensus 27 ~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l 104 (288)
T cd06616 27 PSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVI 104 (288)
T ss_pred CCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCC
Confidence 46889999998765433 44567889999999996 9999999999999999999999986 57665432 23579
Q ss_pred CHHHHHHHHHHHHHHHHHHHhC-CcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPS 154 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~ 154 (477)
++..+..++.|++.||+|||+. |++||||||+||+++.++ .+.++|||++.....+. ......++..|.|||.+.
T Consensus 105 ~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~-~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~ 180 (288)
T cd06616 105 PEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG-NIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERID 180 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC-cEEEeecchhHHhccCC---ccccccCccCccCHHHhc
Confidence 9999999999999999999975 999999999999997643 24445999875433221 112334667899999875
Q ss_pred CC------CcccccCcceEEEEEE--eeecccc
Q psy6508 155 SK------TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 155 ~~------~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+. .++|+ |++|++++++ +..||..
T Consensus 181 ~~~~~~~~~~~Di-~slG~il~el~~g~~p~~~ 212 (288)
T cd06616 181 PSARDGYDVRSDV-WSLGITLYEVATGKFPYPK 212 (288)
T ss_pred cccccCCcchhhh-hHHHHHHHHHHhCCCCchh
Confidence 32 56899 9999999999 7778764
No 389
>KOG0669|consensus
Probab=99.85 E-value=5.7e-23 Score=186.34 Aligned_cols=168 Identities=20% Similarity=0.381 Sum_probs=134.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEe--------CCeEEEEEecCCCCCHHHHHHhC-
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--------ERYVYIILEYCDGGDLCSFIRSH- 72 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--------~~~~~lv~e~~~g~sL~~~l~~~- 72 (477)
++|+.||+|++-.++..........+|+++|+.|.|+|++.++.+|.. ...+|+|+.+|+ .+|.-+|...
T Consensus 40 n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~~ 118 (376)
T KOG0669|consen 40 NTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE-HDLAGLLSNRK 118 (376)
T ss_pred CccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh-hhHHHHhcCcc
Confidence 567889998766544333334557899999999999999999887642 245999999998 8999999775
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcc-c-ccCCeEEEecccccc
Q psy6508 73 EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAY-I-EQGNTKVICSVFEPR 150 (477)
Q Consensus 73 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~-~-~~g~t~v~~~~y~pp 150 (477)
-+++..++.+++.+++.||.|+|+..|+|||+||+|+||+.++ .+.+.|||+++...-+.. . ......+.|.||.||
T Consensus 119 vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dg-ilklADFGlar~fs~~~n~~kprytnrvvTLwYrpp 197 (376)
T KOG0669|consen 119 VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDG-ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPP 197 (376)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCc-eEEeeccccccceecccccCCCCcccceeeeecCCH
Confidence 4799999999999999999999999999999999999998754 233459999853221111 0 112457899999999
Q ss_pred ccCCCC----CcccccCcceEEEEEE
Q psy6508 151 EIPSSK----TSLEYQRSKGELYVEF 172 (477)
Q Consensus 151 E~~~~~----~~~Di~~s~G~il~e~ 172 (477)
|.+.+. ++.|+ |..||++.||
T Consensus 198 EllLG~r~yg~~iDi-WgAgCimaeM 222 (376)
T KOG0669|consen 198 ELLLGDREYGPPIDI-WGAGCIMAEM 222 (376)
T ss_pred HHhhcccccCCcchh-HhHHHHHHHH
Confidence 998876 78999 9999999999
No 390
>KOG0671|consensus
Probab=99.85 E-value=4.7e-21 Score=183.50 Aligned_cols=168 Identities=22% Similarity=0.304 Sum_probs=134.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-C-C----CccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-H-Q----HIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-- 73 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-H-p----nIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-- 73 (477)
+++..||||+++.- ...++..+-|+.+|+++. + | -++++.++|.-.++.|||+|.+ |.|+.++++.++
T Consensus 112 ~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~ 187 (415)
T KOG0671|consen 112 ETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYI 187 (415)
T ss_pred CCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCcc
Confidence 45788999998643 344566778999999994 2 3 3788888899999999999998 589999998865
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-------------------cceeecccccceecccCCcc
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-------------------TLKLAGLKQGVSEKAKGSAY 134 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-------------------~~rl~~~dfG~~~~~~gs~~ 134 (477)
++|...++.+++|++++++|||+.+++|-||||+|||+-+. ..-+..+|||.+...+
T Consensus 188 ~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~---- 263 (415)
T KOG0671|consen 188 PFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH---- 263 (415)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceec----
Confidence 69999999999999999999999999999999999999321 1112345777654322
Q ss_pred cccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 135 IEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 135 ~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+.-.+.|.|..|.|||++.+- ...|+ ||+|||++|+ |..-|.+
T Consensus 264 -e~hs~iVsTRHYRAPEViLgLGwS~pCDv-WSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 264 -EHHSTIVSTRHYRAPEVILGLGWSQPCDV-WSIGCILVELYTGETLFQT 311 (415)
T ss_pred -cCcceeeeccccCCchheeccCcCCccCc-eeeeeEEEEeeccceeccc
Confidence 223567889999999998875 77899 9999999999 6666664
No 391
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.85 E-value=9.5e-22 Score=190.97 Aligned_cols=171 Identities=30% Similarity=0.424 Sum_probs=139.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
++++.||+|.+......+...+.+.+|+.++++++|||++++++++......++++||++ ++|.+++.+. ..+++..+
T Consensus 22 ~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~ 100 (282)
T cd07829 22 KTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLI 100 (282)
T ss_pred CCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhccCCCHHHH
Confidence 468999999998765344445678899999999999999999999999999999999998 6999999876 57999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
..++.|++.||.|||++|++||||+|+||+++++ .+++ .|||.+....... ........+..|.|||...+.
T Consensus 101 ~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l--~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~ 176 (282)
T cd07829 101 KSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKL--ADFGLARAFGIPL--RTYTHEVVTLWYRAPEILLGSKHY 176 (282)
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEE--ecCCcccccCCCc--cccCccccCcCcCChHHhcCCcCC
Confidence 9999999999999999999999999999999774 4554 4899875443221 112233455679999987543
Q ss_pred -CcccccCcceEEEEEE--eeeccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|++++|+ +..||.
T Consensus 177 ~~~~Dv-~slG~~l~~l~~~~~~~~ 200 (282)
T cd07829 177 STAVDI-WSVGCIFAEMITGKPLFP 200 (282)
T ss_pred CccccH-HHHHHHHHHHHhCCCCCC
Confidence 67899 9999999999 555554
No 392
>TIGR03591 polynuc_phos polyribonucleotide nucleotidyltransferase. Members of this protein family are polyribonucleotide nucleotidyltransferase, also called polynucleotide phosphorylase. Some members have been shown also to have additional functions as guanosine pentaphosphate synthetase and as poly(A) polymerase (see model TIGR02696 for an exception clade, within this family).
Probab=99.85 E-value=2.5e-20 Score=199.76 Aligned_cols=202 Identities=18% Similarity=0.225 Sum_probs=164.9
Q ss_pred eeecccccce-ecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeecccc-----cc-ccCCCCCc
Q psy6508 117 KLAGLKQGVS-EKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFAS-----QI-RTGWLRDS 189 (477)
Q Consensus 117 rl~~~dfG~~-~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~-----~~-r~~~~~~~ 189 (477)
|.+.+.+|.. +.++||++++.|+|++.+.+++|.|...+. | +.-+.+++...+|+. .. ++...++.
T Consensus 5 R~i~ie~G~la~~AdGSa~v~~G~T~VlatV~~~~~~~~~~---d----f~pL~vey~e~~~A~gkipg~f~kReg~p~~ 77 (684)
T TIGR03591 5 RTLTLETGKIARQADGAVVVRYGDTVVLVTVVAAKEAKEGQ---D----FFPLTVNYQEKFYAAGKIPGGFFKREGRPSE 77 (684)
T ss_pred ccEEEEECCcCCCCCeEEEEEECCeEEEEEEEcCCCCCCCC---c----eEeEEEEEEehhhhccCCCCCcccCCCCCCH
Confidence 4566789976 679999999999999999999998854433 3 345666665544432 22 23345667
Q ss_pred chHHHHHHHHHHhhhhhhcccCCC---CcccEEEEEEeCCCchH--HHHHHHHHHHHhhCCCCCCceEEEEEEEeeCCeE
Q psy6508 190 EEKELGNHLKRALEPAVCRHEFSN---FQVDLFVLVLQNDGSAL--SAAINCANLALVDAAIPMYDLVTSSTLALRGGLT 264 (477)
Q Consensus 190 ~~~~l~~~i~~~l~~~i~~~~~Pr---~~i~i~v~vL~~dg~~~--~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~~~ 264 (477)
.+.++++++.+.++|. ||+ +.+++.+++|+.||+.. .+|+|||++||.|+||||+++|+|++++..+|.+
T Consensus 78 ~eil~srlIdR~lrpl-----fp~~~~~~i~V~~~VLs~Dg~~~~d~aai~aAsaAL~~s~IP~~~~v~av~vg~idg~~ 152 (684)
T TIGR03591 78 KETLTSRLIDRPIRPL-----FPKGFRNEVQVVATVLSYDPENDPDILAIIGASAALAISGIPFNGPIAAVRVGYIDGQY 152 (684)
T ss_pred HHHHHHHHHhhHHHHh-----cCCCCCceEEEEEEEEecCcCCchHHHHHHHHHHHHHhcCCCcCCCeEEEEEEEECCEE
Confidence 7888999999998774 777 88999999999999975 4999999999999999999999999999999999
Q ss_pred EeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEee-ecHHHHHHHHHHHHhcccchhhHHHHhHhhhccc
Q psy6508 265 FIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGT-IQQERLADHIEQLIGCCESLCTDRVQKLVSDHVT 343 (477)
Q Consensus 265 ~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~-~~~~~~~~~l~~~~~~~~~i~~~~i~~~l~~~~~ 343 (477)
++|||..|++. +...++++ ...+.++.++..|+ ++.+++.++++.|.++|+.+... +++.+.....
T Consensus 153 ildPt~~E~~~----------s~~~l~va--~t~~~i~mie~~~~~i~e~~l~~al~~a~~~~~~i~~~-~~~~~~~~~~ 219 (684)
T TIGR03591 153 VLNPTVDELEK----------SDLDLVVA--GTKDAVLMVESEAKELSEEVMLGAIEFGHEEIQPVIEA-IEELAEEAGK 219 (684)
T ss_pred EEcCCHHHHhh----------CCceEEEE--ccCCcEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCC
Confidence 99999999983 35666665 55677888888765 99999999999999999999999 8887765543
No 393
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.85 E-value=1.4e-21 Score=196.14 Aligned_cols=168 Identities=24% Similarity=0.359 Sum_probs=134.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeC------CeEEEEEecCCCCCHHHHHHhCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE------RYVYIILEYCDGGDLCSFIRSHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------~~~~lv~e~~~g~sL~~~l~~~~~l 75 (477)
.+|+.||+|++.+....+.....+.+|+.+++.++||||+++++++... ..+|+++||+. .+|.++.. ..+
T Consensus 38 ~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~ 114 (342)
T cd07879 38 RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG--HPL 114 (342)
T ss_pred CCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHc--CCC
Confidence 4688999999876544444446688999999999999999999998754 34699999997 68877653 368
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
++..+..++.|++.||.|||++|++||||||+||+++.+. ++.+.|||++...... .....++..|+|||...+
T Consensus 115 ~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~-~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~ 188 (342)
T cd07879 115 SEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC-ELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILN 188 (342)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-CEEEeeCCCCcCCCCC-----CCCceeeecccChhhhcC
Confidence 9999999999999999999999999999999999997642 3445599987644321 123466788999998755
Q ss_pred C----CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|++++|+ +..||.+
T Consensus 189 ~~~~~~~~Dv-~slGvil~el~~g~~pf~~ 217 (342)
T cd07879 189 WMHYNQTVDI-WSVGCIMAEMLTGKTLFKG 217 (342)
T ss_pred ccccCchHHH-HHHHHHHHHHHhCCCCCCC
Confidence 3 57899 9999999999 6677764
No 394
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.84 E-value=1.9e-21 Score=186.94 Aligned_cols=169 Identities=27% Similarity=0.366 Sum_probs=132.7
Q ss_pred cEEEEEEcccC---CCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh----CCCCCH
Q psy6508 5 TEVAIKCIDKT---KVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS----HEKLSE 77 (477)
Q Consensus 5 ~~vAiK~i~~~---~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~l~~ 77 (477)
..+++|+++.. .........+.+|+.+++.++||||+++++.+......++++||+++++|.+++.. ...+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~ 105 (260)
T cd08222 26 AEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSE 105 (260)
T ss_pred CcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCH
Confidence 34555555432 22233344677899999999999999999999988899999999999999998864 346899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
..++.++.|++.||.|||++|++|+||+|+||+++++.+++. |||.+....+... ...+..++..|.|||...+.
T Consensus 106 ~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~--d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~ 181 (260)
T cd08222 106 NQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIG--DFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQG 181 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeec--ccCceeecCCCcc--cccCCCCCcCccCHHHHccCC
Confidence 999999999999999999999999999999999988765555 9988765433221 12233456789999987654
Q ss_pred --CcccccCcceEEEEEE--eeeccc
Q psy6508 157 --TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ |++|++++++ +..||.
T Consensus 182 ~~~~~Dv-~slG~~~~~l~~~~~~~~ 206 (260)
T cd08222 182 YDSKSDI-WSLGCILYEMCCLAHAFE 206 (260)
T ss_pred CCchhhH-HHHHHHHHHHHhCCCCCC
Confidence 56899 9999999998 556665
No 395
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.84 E-value=1.4e-21 Score=196.16 Aligned_cols=169 Identities=24% Similarity=0.369 Sum_probs=136.9
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCe------EEEEEecCCCCCHHHHHHhCCCC
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY------VYIILEYCDGGDLCSFIRSHEKL 75 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~------~~lv~e~~~g~sL~~~l~~~~~l 75 (477)
.+++.||+|++..........+.+.+|+.++++++||||+++++++...+. .|+|+||+ +++|.+++.. .++
T Consensus 38 ~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l 115 (343)
T cd07851 38 KTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-QKL 115 (343)
T ss_pred CCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc-CCC
Confidence 367899999987654444455678899999999999999999998765554 89999999 5899999876 479
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCC
Q psy6508 76 SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 76 ~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~ 155 (477)
++..+..++.|++.||.|||+.|++||||||+||+++++. ++.++|||.+...... .....++..|.|||...+
T Consensus 116 ~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~-~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~ 189 (343)
T cd07851 116 SDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLN 189 (343)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-CEEEcccccccccccc-----ccCCcccccccCHHHHhC
Confidence 9999999999999999999999999999999999997643 3455699988654322 123456678999998644
Q ss_pred C----CcccccCcceEEEEEE--eeecccc
Q psy6508 156 K----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 156 ~----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
. .++|+ ||+|+++|++ +..||.+
T Consensus 190 ~~~~~~~~Dv-wslGv~l~elltg~~pf~~ 218 (343)
T cd07851 190 WMHYNQTVDI-WSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred CCCCCchHhH-HHHHHHHHHHHhCCCCCCC
Confidence 2 67899 9999999999 6677753
No 396
>KOG4278|consensus
Probab=99.84 E-value=4.6e-22 Score=199.60 Aligned_cols=173 Identities=21% Similarity=0.321 Sum_probs=143.4
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQCQ 81 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~~~ 81 (477)
.-.||||.++.+.+ ..++|.+|..+|+.++|||+|+++++|..+..+|||+|||.+|+|.+||++.. .++.-...
T Consensus 292 slTvAVKtLKEDtM---eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLl 368 (1157)
T KOG4278|consen 292 SLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLL 368 (1157)
T ss_pred ceeeehhhhhhcch---hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHH
Confidence 34689998865533 35789999999999999999999999999999999999999999999998754 47777888
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.||..|+.||..++++||||...|+|+..+.+.. ..|||+++...|..|...-..+ ..--|.+||.+.-. .+
T Consensus 369 yMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVK-vADFGLsRlMtgDTYTAHAGAK-FPIKWTAPEsLAyNtFSiK 446 (1157)
T KOG4278|consen 369 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVK-VADFGLSRLMTGDTYTAHAGAK-FPIKWTAPESLAYNTFSIK 446 (1157)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEE-eeccchhhhhcCCceecccCcc-CcccccCcccccccccccc
Confidence 9999999999999999999999999999998775433 3699999988877664322221 11238899987654 77
Q ss_pred ccccCcceEEEEEE---eeeccccccc
Q psy6508 159 LEYQRSKGELYVEF---KFAPFASQIR 182 (477)
Q Consensus 159 ~Di~~s~G~il~e~---~~~Pf~~~~r 182 (477)
+|+ |+||+++||+ ++.||.+.++
T Consensus 447 SDV-WAFGVLLWEIATYGMsPYPGidl 472 (1157)
T KOG4278|consen 447 SDV-WAFGVLLWEIATYGMSPYPGIDL 472 (1157)
T ss_pred hhh-HHHHHHHHHHHhcCCCCCCCccH
Confidence 899 9999999998 7899987654
No 397
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.84 E-value=2.9e-21 Score=187.87 Aligned_cols=170 Identities=22% Similarity=0.348 Sum_probs=136.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~ 78 (477)
.+++.|+||.+....... ......+|+..+++++ |||++++++++..++..|+||||+ +++|.+++.... .+++.
T Consensus 22 ~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~ 99 (283)
T cd07830 22 ETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSES 99 (283)
T ss_pred CCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHH
Confidence 357889999987654322 2234567999999998 999999999999999999999999 689999987754 78999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+..++.|++.+|.|||++|++|+||+|+||+++++ .+++ .|||.......... .....++..|+|||...+.
T Consensus 100 ~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l--~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~ 174 (283)
T cd07830 100 VIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKI--ADFGLAREIRSRPP---YTDYVSTRWYRAPEILLRST 174 (283)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEE--eecccceeccCCCC---cCCCCCcccccCceeeecCc
Confidence 999999999999999999999999999999999864 4444 49998765443211 1234566789999987433
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|++++++ +..||..
T Consensus 175 ~~~~~~Di-~s~G~~l~el~~g~~~~~~ 201 (283)
T cd07830 175 SYSSPVDI-WALGCIMAELYTLRPLFPG 201 (283)
T ss_pred CcCCccch-hhHHHHHHHHHhCCCccCC
Confidence 67899 9999999999 5566653
No 398
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.84 E-value=1.2e-21 Score=192.24 Aligned_cols=171 Identities=20% Similarity=0.268 Sum_probs=132.6
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.+++.||||.++..... .....+.+|+.++.+. .||||+++++++......|++|||+. ++|.+++.. ...+++..
T Consensus 38 ~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~ 115 (296)
T cd06618 38 KTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQGPIPEDI 115 (296)
T ss_pred CCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcCCCCHHH
Confidence 35889999998765432 2345667788777777 49999999999999999999999986 688887765 34789999
Q ss_pred HHHHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 80 CQQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
+..++.|++.||.|||+ .||+||||+|+||+++.+. .+.+.|||.+........ .....++..|+|||...+.
T Consensus 116 ~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~-~~kL~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~ 191 (296)
T cd06618 116 LGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG-NVKLCDFGISGRLVDSKA---KTRSAGCAAYMAPERIDPPDP 191 (296)
T ss_pred HHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC-CEEECccccchhccCCCc---ccCCCCCccccCHhhcCCCCC
Confidence 99999999999999997 5999999999999997643 445569998754332111 1122355679999987543
Q ss_pred -----CcccccCcceEEEEEE--eeecccc
Q psy6508 157 -----TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 -----~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.++|+ ||+|+++|++ +..||..
T Consensus 192 ~~~~~~~~Di-~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 192 NPKYDIRADV-WSLGISLVELATGQFPYKN 220 (296)
T ss_pred ccccccchhH-HHHHHHHHHHHhCCCCCCc
Confidence 46899 9999999999 6677753
No 399
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.83 E-value=1.7e-21 Score=183.73 Aligned_cols=172 Identities=32% Similarity=0.518 Sum_probs=141.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++|+.||+|++........ .+.+.+|+..+++++|+|++++++.+......++++|++++++|.+++.....++...+.
T Consensus 12 ~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~ 90 (244)
T smart00220 12 KTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEAR 90 (244)
T ss_pred CCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHH
Confidence 3688999999876643322 578999999999999999999999999989999999999988999999876668999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---Cc
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~ 158 (477)
.++.+++.++.+||+.|++|+||+|.||+++++. .+..+|||.+....... ......+...|.|||...+. .+
T Consensus 91 ~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~-~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~ 166 (244)
T smart00220 91 FYARQILSALEYLHSNGIIHRDLKPENILLDEDG-HVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKA 166 (244)
T ss_pred HHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCC-cEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCch
Confidence 9999999999999999999999999999998752 44455998876544321 11234456679999987643 67
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|++++++ +..||..
T Consensus 167 ~Di-~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 167 VDV-WSLGVILYELLTGKPPFPG 188 (244)
T ss_pred hhH-HHHHHHHHHHHhCCCCCCC
Confidence 899 9999999998 5566653
No 400
>PRK11824 polynucleotide phosphorylase/polyadenylase; Provisional
Probab=99.83 E-value=1.1e-19 Score=195.49 Aligned_cols=204 Identities=18% Similarity=0.205 Sum_probs=165.1
Q ss_pred eeecccccce-ecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccc------cccCCCCCc
Q psy6508 117 KLAGLKQGVS-EKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQ------IRTGWLRDS 189 (477)
Q Consensus 117 rl~~~dfG~~-~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~------~r~~~~~~~ 189 (477)
|.+.+.+|.. +.++||++++.|+|.+.+.+++|.|...+. | +.-+.+++...+|+.. .++...++.
T Consensus 14 r~i~~e~G~ia~qAdGSa~v~~G~T~VlatV~~~~~~~~~~---d----f~pL~v~y~e~~~A~gkiP~~f~kreg~pse 86 (693)
T PRK11824 14 RTLTLETGKLARQANGAVLVRYGDTVVLVTVVASKEPKEGQ---D----FFPLTVDYEEKTYAAGKIPGGFFKREGRPSE 86 (693)
T ss_pred ccEEEEECCcCCCCCeEEEEEECCeEEEEEEEcCCCCCCCC---C----eeeeEEEEEehhhhccCCCcccccCCCCCCh
Confidence 4566789977 569999999999999999999999853332 3 3456667655555422 223345677
Q ss_pred chHHHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchH--HHHHHHHHHHHhhCCCCCCceEEEEEEEeeCCeEEeC
Q psy6508 190 EEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSAL--SAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFID 267 (477)
Q Consensus 190 ~~~~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~--~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~~~~~D 267 (477)
.+..+++++.+.++|.. +..+++.++|.+++|+.||+.. ++|+|||++||.++||||.++|+|+++++.+|.+++|
T Consensus 87 ~eil~srlIdR~lrplf--p~~~~~~i~I~~~VL~~Dg~~~~d~aai~aAsaAL~~s~IP~~~~v~av~vg~i~g~~ivd 164 (693)
T PRK11824 87 KETLTSRLIDRPIRPLF--PKGFRNEVQVVATVLSVDPENDPDILAMIGASAALSISGIPFNGPIAAVRVGYIDGEFVLN 164 (693)
T ss_pred HHHHHHHHHhhhHHHhC--CCCCCeEEEEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCcCCCeEEEEEEEECCEEEEc
Confidence 78889999999999853 3445899999999999999874 4899999999999999999999999999999999999
Q ss_pred CChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEe-eecHHHHHHHHHHHHhcccchhhHHHHhHhhhcc
Q psy6508 268 PVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVG-TIQQERLADHIEQLIGCCESLCTDRVQKLVSDHV 342 (477)
Q Consensus 268 p~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g-~~~~~~~~~~l~~~~~~~~~i~~~~i~~~l~~~~ 342 (477)
||.+|++. +...++++ .+.+.++.++..| .++.+++.++++.|.++|+.+... +++.+...-
T Consensus 165 Pt~~E~~~----------s~~~l~va--~t~~~i~mie~~~~~l~e~~l~~al~~a~~~~~~i~~~-~~~~~~~~~ 227 (693)
T PRK11824 165 PTVEELEE----------SDLDLVVA--GTKDAVLMVESEAKELSEEVMLEAIEFGHEAIQELIDA-QEELAAEAG 227 (693)
T ss_pred CCHHHHhh----------CcceEEEE--EccCceEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcC
Confidence 99999983 35556665 4446788888876 499999999999999999999999 888776444
No 401
>KOG0670|consensus
Probab=99.83 E-value=1.1e-20 Score=186.51 Aligned_cols=161 Identities=24% Similarity=0.309 Sum_probs=135.6
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCC------CCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH------QHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--- 73 (477)
-|..||||++...... .+.=++|+.+|++|+. -|+++++..|...+++|||+|.+. .+|.+.|++.+
T Consensus 456 r~~~vAiKIIRnNE~M---~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nv 531 (752)
T KOG0670|consen 456 RGQEVAIKIIRNNEVM---HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNV 531 (752)
T ss_pred CCCeeEEEEeecchHH---hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCccc
Confidence 3668999999876432 2345689999999952 489999999999999999999997 89999999876
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccC
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIP 153 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~ 153 (477)
.+....++.++.|+..||..|-..||+|.||||+|||++.+..-+.+||||.+..+..... ........|.+||++
T Consensus 532 GL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei----tPYLVSRFYRaPEIi 607 (752)
T KOG0670|consen 532 GLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI----TPYLVSRFYRAPEII 607 (752)
T ss_pred ceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccc----cHHHHHHhccCccee
Confidence 4889999999999999999999999999999999999999888888899998865543211 123344579999999
Q ss_pred CCC---CcccccCcceEEEEEE
Q psy6508 154 SSK---TSLEYQRSKGELYVEF 172 (477)
Q Consensus 154 ~~~---~~~Di~~s~G~il~e~ 172 (477)
.|. ...|+ ||.||.+||+
T Consensus 608 LG~~yd~~iD~-WSvgctLYEl 628 (752)
T KOG0670|consen 608 LGLPYDYPIDT-WSVGCTLYEL 628 (752)
T ss_pred ecCcccCCccc-eeeceeeEEe
Confidence 887 67899 9999999999
No 402
>KOG0199|consensus
Probab=99.82 E-value=1.7e-20 Score=190.96 Aligned_cols=171 Identities=18% Similarity=0.294 Sum_probs=139.4
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh--CCCCCHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS--HEKLSEFQCQ 81 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~--~~~l~~~~~~ 81 (477)
.-.||||.++....+. ...+|.+|+.+|.+|+|||++++||+..+ ....||||+++.|+|.+.|.+ ...|.-....
T Consensus 138 ~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lc 215 (1039)
T KOG0199|consen 138 HVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLC 215 (1039)
T ss_pred EEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHH
Confidence 3469999998776554 56789999999999999999999999877 678999999999999999987 2358888999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCC-cccccCCeEEEeccccccccCCCC---
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGS-AYIEQGNTKVICSVFEPREIPSSK--- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs-~~~~~g~t~v~~~~y~ppE~~~~~--- 156 (477)
.++.||+.|+.||.++++|||||...|+++.. ..+| ++|||+.+...+. .++.++...-.-..|+|||.+...
T Consensus 216 dya~QiA~aM~YLeskrlvHRDLAARNlllasprtVK--I~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFS 293 (1039)
T KOG0199|consen 216 DYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVK--ICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFS 293 (1039)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceee--eecccceeccCCCCcceEecCCCcCcccccCHhHhcccccc
Confidence 99999999999999999999999999999965 3444 4699998754432 233333333344469999998766
Q ss_pred CcccccCcceEEEEEE---eeecccc
Q psy6508 157 TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
.++|+ |++|+++||| |--||.+
T Consensus 294 haSDv-WmyGVTiWEMFtyGEePW~G 318 (1039)
T KOG0199|consen 294 HASDV-WMYGVTIWEMFTYGEEPWVG 318 (1039)
T ss_pred ccchh-hhhhhhHHhhhccCCCCCCC
Confidence 67899 9999999999 4466654
No 403
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.82 E-value=1.1e-20 Score=214.68 Aligned_cols=159 Identities=21% Similarity=0.310 Sum_probs=127.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+|+.||+|.++..... ..+|+..+++++||||+++++++...+..|+||||+++|+|.++++. +++..+.
T Consensus 713 ~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~ 783 (968)
T PLN00113 713 KNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERRR 783 (968)
T ss_pred CCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CCHHHHH
Confidence 46889999998644321 13568899999999999999999999999999999999999999963 8899999
Q ss_pred HHHHHHHHHHHHHH---hCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 82 QFVRQLVLALKFLR---ENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
+++.|++.||+||| +.+|+||||||+||+++.+....+ .+|...... ...+..++..|+|||...+.
T Consensus 784 ~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~--~~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~ 855 (968)
T PLN00113 784 KIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL--RLSLPGLLC------TDTKCFISSAYVAPETRETKDI 855 (968)
T ss_pred HHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE--Eeccccccc------cCCCccccccccCcccccCCCC
Confidence 99999999999999 679999999999999986533222 234322111 11234667889999998765
Q ss_pred -CcccccCcceEEEEEE--eeeccc
Q psy6508 157 -TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
.++|+ ||+|+++||+ +..||.
T Consensus 856 ~~~sDv-~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 856 TEKSDI-YGFGLILIELLTGKSPAD 879 (968)
T ss_pred Ccccch-hhHHHHHHHHHhCCCCCC
Confidence 77999 9999999999 667774
No 404
>KOG0668|consensus
Probab=99.82 E-value=8.5e-21 Score=170.09 Aligned_cols=165 Identities=24% Similarity=0.386 Sum_probs=131.4
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeC--CeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDE--RYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~--~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
.+++.++||+++.- ..+.+.+|+++|+.|. ||||++++++..+. ..+.+|+||+++.+...+. +.++..
T Consensus 61 ~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~ 132 (338)
T KOG0668|consen 61 TNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY---PTLTDY 132 (338)
T ss_pred CCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHh---hhhchh
Confidence 35778999998643 3356889999999995 99999999998754 4688999999988877765 358899
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.++.++.+++.||.|+|+.||.|||+||.|++|+...-++-++|+|++....... .-+-.+.+..|--||.+..-
T Consensus 133 dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~---eYnVRVASRyfKGPELLVdy~~ 209 (338)
T KOG0668|consen 133 DIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELLVDYQM 209 (338)
T ss_pred hHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCc---eeeeeeehhhcCCchheeechh
Confidence 9999999999999999999999999999999999765555556999985433211 11345666678889987654
Q ss_pred --CcccccCcceEEEEEEe--eeccc
Q psy6508 157 --TSLEYQRSKGELYVEFK--FAPFA 178 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~~--~~Pf~ 178 (477)
-+.|+ ||+||++..|. .-||.
T Consensus 210 YDYSLD~-WS~GcmlA~miFrkepFF 234 (338)
T KOG0668|consen 210 YDYSLDM-WSLGCMLASMIFRKEPFF 234 (338)
T ss_pred ccccHHH-HHHHHHHHHHHhccCccc
Confidence 56799 99999999984 35665
No 405
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.82 E-value=7.8e-21 Score=186.55 Aligned_cols=150 Identities=15% Similarity=0.201 Sum_probs=115.4
Q ss_pred HHHHHHHhcCCCCccceEEEEEeCC----eEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEc
Q psy6508 27 NEIKALKLLHHQHIVTMLDFLWDER----YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHF 102 (477)
Q Consensus 27 ~E~~il~~l~HpnIv~~~~~~~~~~----~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHr 102 (477)
.+...+..++|+|++++++++.... ..+++++++. .++.+.+......++..+..++.|++.||.|||++||+||
T Consensus 72 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHr 150 (294)
T PHA02882 72 ALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHG 150 (294)
T ss_pred HHHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 3344556678999999999765443 4578899875 6888887765567889999999999999999999999999
Q ss_pred cCCCCceeeccCcceeecccccceecccCCc--c---cccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--
Q psy6508 103 DLKPQNILIKNNTLKLAGLKQGVSEKAKGSA--Y---IEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF-- 172 (477)
Q Consensus 103 Dlkp~NIll~~~~~rl~~~dfG~~~~~~gs~--~---~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~-- 172 (477)
||||+|||++.+. .+.++|||++....... . ........+++.|+|||...+. .++|+ ||+|++++|+
T Consensus 151 DiKp~Nill~~~~-~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~Di-wSlG~~l~el~~ 228 (294)
T PHA02882 151 DIKPENIMVDGNN-RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDL-ESLGYCMLKWAG 228 (294)
T ss_pred CCCHHHEEEcCCC-cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHH-HHHHHHHHHHHh
Confidence 9999999997642 34456999986532111 0 0112234678899999988766 67899 9999999999
Q ss_pred eeecccc
Q psy6508 173 KFAPFAS 179 (477)
Q Consensus 173 ~~~Pf~~ 179 (477)
+..||.+
T Consensus 229 g~~P~~~ 235 (294)
T PHA02882 229 IKLPWKG 235 (294)
T ss_pred CCCCCCc
Confidence 6688875
No 406
>KOG1345|consensus
Probab=99.81 E-value=1.9e-20 Score=171.71 Aligned_cols=167 Identities=20% Similarity=0.315 Sum_probs=133.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEE-EEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLD-FLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~-~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.++..+++|.+++.. ...++|.+|..---.| .|.||+.-|+ .|+..+.+.+++||++.|+|..-+... .+-+..
T Consensus 47 ~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~-GigE~~ 122 (378)
T KOG1345|consen 47 QSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAA-GIGEAN 122 (378)
T ss_pred CCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCcc-cccHHH
Confidence 577889999987764 3456799999876667 5899999888 478888999999999999999887663 588999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceee-ccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC--
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll-~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.++++.|+++|+.|||++++||||||.+|||| +.+..|+.++|||...... +... ..--+-.|.|||.....
T Consensus 123 ~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g-~tV~----~~~~~~~y~~pe~~~~~~n 197 (378)
T KOG1345|consen 123 TKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG-TTVK----YLEYVNNYHAPELCDTVVN 197 (378)
T ss_pred HHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccC-ceeh----hhhhhcccCCcHHHhhccc
Confidence 99999999999999999999999999999999 5677799999999874322 2110 01122348888865322
Q ss_pred ------CcccccCcceEEEEEE--eeeccc
Q psy6508 157 ------TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 157 ------~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
+..|+ |.+|++++.+ |-.||.
T Consensus 198 e~~~~~ps~D~-WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 198 EKLVVNPSTDI-WQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred cceEecccccc-hheeeeeeeeecCCCcch
Confidence 77899 9999999988 556765
No 407
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.81 E-value=2.4e-19 Score=194.72 Aligned_cols=161 Identities=24% Similarity=0.324 Sum_probs=129.5
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.+++.||||+++.... .....+.+.+|+.+++.++||||+++++.+.....+|+||||+.|++|.+++...+.+++..+
T Consensus 27 ~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~ 106 (669)
T cd05610 27 NNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMA 106 (669)
T ss_pred CCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHH
Confidence 3688999999976543 334456789999999999999999999999999999999999999999999988778999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---- 156 (477)
+.++.||+.||.|||++||+||||||+|||++.+. ++.++|||++........ .....++++.|.+||.....
T Consensus 107 ~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-~vkL~DFGls~~~~~~~~--~~~~~~~t~~~~~pe~~~~~~~~~ 183 (669)
T cd05610 107 VKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG-HIKLTDFGLSKVTLNREL--NMMDILTTPSMAKPKNDYSRTPGQ 183 (669)
T ss_pred HHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC-CEEEEeCCCCccccCCcc--cccccccCccccCccccccCCCCc
Confidence 99999999999999999999999999999997643 344569999875443321 11234667789999865544
Q ss_pred CcccccCcce
Q psy6508 157 TSLEYQRSKG 166 (477)
Q Consensus 157 ~~~Di~~s~G 166 (477)
...++ |++|
T Consensus 184 ~~s~~-~s~g 192 (669)
T cd05610 184 VLSLI-SSLG 192 (669)
T ss_pred eeeee-eecC
Confidence 22344 5555
No 408
>KOG0200|consensus
Probab=99.81 E-value=1.4e-19 Score=193.97 Aligned_cols=172 Identities=24% Similarity=0.384 Sum_probs=143.5
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---------
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--------- 73 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------- 73 (477)
...||||.++..... ...+.+..|+.+|+.+ +||||+.+++++..++.+++|+||++.|+|..+++..+
T Consensus 328 ~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~ 406 (609)
T KOG0200|consen 328 YVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSG 406 (609)
T ss_pred eEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccC
Confidence 567999998766544 6678899999999999 69999999999999999999999999999999998765
Q ss_pred -------CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceeecccccceecccCCcccc-cCCeEEEe
Q psy6508 74 -------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIE-QGNTKVIC 144 (477)
Q Consensus 74 -------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~-~g~t~v~~ 144 (477)
.++......++.||+.|++||++.+++||||-.+|||+..+ .+|+ +|||+++......+.. .+.....-
T Consensus 407 ~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kI--aDFGlar~~~~~~~y~~~~~~~~LP 484 (609)
T KOG0200|consen 407 VFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKI--ADFGLARDHYNKDYYRTKSSAGTLP 484 (609)
T ss_pred CCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEE--ccccceeccCCCCceEecCCCCccc
Confidence 38889999999999999999999999999999999999887 3444 5999998655544443 32221133
Q ss_pred ccccccccCCCC---CcccccCcceEEEEEE---eeecccc
Q psy6508 145 SVFEPREIPSSK---TSLEYQRSKGELYVEF---KFAPFAS 179 (477)
Q Consensus 145 ~~y~ppE~~~~~---~~~Di~~s~G~il~e~---~~~Pf~~ 179 (477)
..|+|||.+... .++|+ ||+|+++||+ |-.||.+
T Consensus 485 ~kWmApEsl~~~~ft~kSDV-WSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 485 VKWMAPESLFDRVFTSKSDV-WSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred eeecCHHHhccCcccccchh-hHHHHHHHHHhhCCCCCCCC
Confidence 349999998876 77899 9999999998 5577775
No 409
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.80 E-value=1.3e-19 Score=169.26 Aligned_cols=172 Identities=28% Similarity=0.443 Sum_probs=140.9
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCC-CCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEK-LSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~-l~~~~~~ 81 (477)
+++.+++|.+...... ...+.+.+|+..+++++|+|++++++.+......++++|++++++|.+++..... +++..+.
T Consensus 23 ~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~ 101 (225)
T smart00221 23 TGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEAR 101 (225)
T ss_pred CCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHH
Confidence 5789999998766433 2457889999999999999999999999988999999999998899999988666 8999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCC-CC---C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPS-SK---T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~-~~---~ 157 (477)
.++.+++.++.+||++|++|+|++|.||+++.+ .++.++|||......... ........+...|++||... .. .
T Consensus 102 ~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~-~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~ 179 (225)
T smart00221 102 FYLRQILEALEYLHSLGIVHRDLKPENILLGMD-GLVKLADFGLARFIHRDL-AALLKTVKGTPFYLAPEVLLGGKGYGE 179 (225)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC-CCEEEeeCceeeEecCcc-cccccceeccCCcCCHhHhcCCCCCCc
Confidence 999999999999999999999999999999875 355556999876543321 00223455667799999872 22 6
Q ss_pred cccccCcceEEEEEE--eeeccc
Q psy6508 158 SLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 158 ~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
++|+ |++|++++++ +..||.
T Consensus 180 ~~Dv-~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 180 AVDI-WSLGVILYELLWGPEPFS 201 (225)
T ss_pred hhhH-HHHHHHHHHHHHCCCCcc
Confidence 7899 9999999998 666665
No 410
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.80 E-value=4.5e-19 Score=162.90 Aligned_cols=166 Identities=30% Similarity=0.458 Sum_probs=135.9
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~ 81 (477)
+++.+++|++....... ..+.+.+|+..++.++|++++++++++......++++|+++|++|.+++... ..++...+.
T Consensus 17 ~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~ 95 (215)
T cd00180 17 TGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEIL 95 (215)
T ss_pred CCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHH
Confidence 48899999987664322 3467899999999999999999999999989999999999999999999875 468999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK----T 157 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~----~ 157 (477)
.++.+++.++++||++|++|+||+|.||+++...-++.++|||.......... ..........|.|||..... .
T Consensus 96 ~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~ 173 (215)
T cd00180 96 RILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSE 173 (215)
T ss_pred HHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCc
Confidence 99999999999999999999999999999987222444558888764443221 11234456679999987653 6
Q ss_pred cccccCcceEEEEEE
Q psy6508 158 SLEYQRSKGELYVEF 172 (477)
Q Consensus 158 ~~Di~~s~G~il~e~ 172 (477)
..|+ |++|++++++
T Consensus 174 ~~D~-~~lg~~~~~l 187 (215)
T cd00180 174 KSDI-WSLGVILYEL 187 (215)
T ss_pred hhhh-HHHHHHHHHH
Confidence 7899 9999999988
No 411
>KOG1025|consensus
Probab=99.78 E-value=5.5e-20 Score=190.12 Aligned_cols=197 Identities=18% Similarity=0.275 Sum_probs=145.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC-CCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~l~~~~~~ 81 (477)
-+-+||||++.... +.+...++..|+.+|.+|+|||++++++++..+. +-||++|+++|+|.+|++.++ ++-.....
T Consensus 724 vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lL 801 (1177)
T KOG1025|consen 724 VKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLL 801 (1177)
T ss_pred ecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHH
Confidence 35689999986544 4455678999999999999999999999998765 889999999999999998764 78999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCc--ccccCCeEEEeccccccccCCCC--
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSA--YIEQGNTKVICSVFEPREIPSSK-- 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~--~~~~g~t~v~~~~y~ppE~~~~~-- 156 (477)
.|..||++|++|||.++++||||-.+|+|+.. +.+++. |||++....... |...+ .-....|++-|.....
T Consensus 802 nw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkit--dfgla~ll~~d~~ey~~~~--gK~pikwmale~i~~~~~ 877 (1177)
T KOG1025|consen 802 NWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKIT--DFGLAKLLAPDEKEYSAPG--GKVPIKWMALESIRIRKY 877 (1177)
T ss_pred HHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEE--ecchhhccCcccccccccc--cccCcHHHHHHHhhccCC
Confidence 99999999999999999999999999999975 555555 999886543322 21111 1112236777766544
Q ss_pred -CcccccCcceEEEEEE---eeeccccccccCCCCCcchHHHHHHHHHHhhhhhhcccCCCCcccEE
Q psy6508 157 -TSLEYQRSKGELYVEF---KFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLF 219 (477)
Q Consensus 157 -~~~Di~~s~G~il~e~---~~~Pf~~~~r~~~~~~~~~~~l~~~i~~~l~~~i~~~~~Pr~~i~i~ 219 (477)
..+|+ |++|+++||+ |-.|+.+ ...+++..+++. --.+.+=|-..+||+
T Consensus 878 thqSDV-WsfGVtiWElmTFGa~Py~g---------i~~~eI~dlle~----geRLsqPpiCtiDVy 930 (1177)
T KOG1025|consen 878 THQSDV-WSFGVTIWELMTFGAKPYDG---------IPAEEIPDLLEK----GERLSQPPICTIDVY 930 (1177)
T ss_pred Cchhhh-hhhhhhHHHHHhcCCCccCC---------CCHHHhhHHHhc----cccCCCCCCccHHHH
Confidence 67899 9999999998 4455553 233444444443 222444455555553
No 412
>KOG1167|consensus
Probab=99.76 E-value=1.6e-18 Score=168.23 Aligned_cols=168 Identities=25% Similarity=0.371 Sum_probs=137.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.++.||+|.+..... ..++.+|++.|..+ .+.||+++.+++..++...+|+||++.....+++.. ++-.+++
T Consensus 63 ~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~ 135 (418)
T KOG1167|consen 63 KRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS---LSLAEIR 135 (418)
T ss_pred ccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc---CCHHHHH
Confidence 578899999876542 24578999999999 699999999999999999999999998888888754 7789999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCc----------------------------
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSA---------------------------- 133 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~---------------------------- 133 (477)
.+++.++.||.++|.+||+||||||+|++.+...-|-.++|||++...++..
T Consensus 136 ~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~ 215 (418)
T KOG1167|consen 136 WYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVAT 215 (418)
T ss_pred HHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccccccc
Confidence 9999999999999999999999999999998876677778999886211100
Q ss_pred ------ccc--------cCCeEEEeccccccccCCCC----CcccccCcceEEEEEE--eeeccc
Q psy6508 134 ------YIE--------QGNTKVICSVFEPREIPSSK----TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 134 ------~~~--------~g~t~v~~~~y~ppE~~~~~----~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
+.. ..-...||+.|.|||++.+- .++|+ ||.|++++.+ ...||.
T Consensus 216 ~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi-ws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 216 ASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI-WSAGVILLSLLSRRYPFF 279 (418)
T ss_pred ccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce-eeccceeehhhccccccc
Confidence 000 00135688899999998754 77999 9999999998 556776
No 413
>PLN00207 polyribonucleotide nucleotidyltransferase; Provisional
Probab=99.76 E-value=1.5e-17 Score=178.55 Aligned_cols=204 Identities=18% Similarity=0.232 Sum_probs=161.0
Q ss_pred eccccc-ceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEE----eeeccccccccCCCCCcchHH
Q psy6508 119 AGLKQG-VSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEF----KFAPFASQIRTGWLRDSEEKE 193 (477)
Q Consensus 119 ~~~dfG-~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~----~~~Pf~~~~r~~~~~~~~~~~ 193 (477)
+.+..| ++++++|+.....|.|.+.+.+-...+...+. |+ +-+-+=+-|- |.-|=. ..++...+...+..
T Consensus 91 ~~~etG~~a~qA~gav~v~~g~t~vl~t~~~~~~~~~~~---dF-~PLtV~y~Ek~~AaGkipgg-f~kREgrp~d~eiL 165 (891)
T PLN00207 91 ILVETGHIGRQASGSVTVTDGETIVYTSVCLADVPSEPS---DF-FPLSVHYQERFSAAGRTSGG-FFKREGRTKDHEVL 165 (891)
T ss_pred EEEEhhHHHHhCCCcEEEEECCeEEEEEEEeccCCCCCC---Cc-cceeEeeeeehhhcCccCCc-eeccCCCCChHHHH
Confidence 345555 45679999999999999998877665554444 54 4333333333 222222 12334456667788
Q ss_pred HHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCc--hHHHHHHHHHHHHhhCCCCCCceEEEEEEEeeCCeEEeCCChH
Q psy6508 194 LGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGS--ALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEE 271 (477)
Q Consensus 194 l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~--~~~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~~~~~Dp~~~ 271 (477)
.++++.+.++|.+..+.||+.+|.+ ++|+.||+ ..++|+|||++||+++||||+++|+||+|+..+|.+++||+..
T Consensus 166 ~sRlIdR~lRPlfp~~~~~etQI~i--~VLsaDg~~~pd~~AInAASaAL~~SgIP~~gpVaAVrVG~idg~~VlnPt~~ 243 (891)
T PLN00207 166 ICRLIDRPLRPTMPKGFYHETQILS--WVLSYDGLHSPDSLAVTAAGIAVALSEVPNLKAIAGVRVGLIGGKFIVNPTTK 243 (891)
T ss_pred HHHHHCccchhhccccCCCCcEEEE--EEEeeCCCCChhhHHHHHHHHHHHhhCCCccCceEEEEEEEECCEEEECCCHH
Confidence 8999999999999999999999965 99999998 6699999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEeee-cHHHHHHHHHHHHhcccchhhHHHHhHhhhcc
Q psy6508 272 EVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTI-QQERLADHIEQLIGCCESLCTDRVQKLVSDHV 342 (477)
Q Consensus 272 E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~~-~~~~~~~~l~~~~~~~~~i~~~~i~~~l~~~~ 342 (477)
|.+. +...+.++ ...+.|+.++..|+. +.+++.++|+.|.++|+.+... +++.+....
T Consensus 244 E~~~----------s~ldLvva--gt~~~IvMIE~~a~e~see~l~~Al~~a~~aik~i~~~-~~el~~~~g 302 (891)
T PLN00207 244 EMEE----------SELDLIMA--GTDSAILMIEGYCNFLPEEKLLEAVEVGQDAVRAICKE-IEVLVKKCG 302 (891)
T ss_pred HHhc----------CCeeEEEE--EcCCeEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhC
Confidence 9883 34555554 445779999998865 9999999999999999999999 887665444
No 414
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.76 E-value=2.6e-19 Score=190.13 Aligned_cols=167 Identities=16% Similarity=0.203 Sum_probs=111.8
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEE------EEeCCeEEEEEecCCCCCHHHHHHhCCC---
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDF------LWDERYVYIILEYCDGGDLCSFIRSHEK--- 74 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~------~~~~~~~~lv~e~~~g~sL~~~l~~~~~--- 74 (477)
+..||+|++...... +.+.+| .++...+.++..+... ...+...++|+||+++++|.+++.....
T Consensus 161 ~~~vAvK~~~~~~~~----e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~ 234 (566)
T PLN03225 161 EGKYVLKKATEYGAV----EIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYN 234 (566)
T ss_pred CcEEEEEEecccchh----HHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchh
Confidence 789999987643211 111111 1122222333332222 2345679999999999999999875421
Q ss_pred -----------------CCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCccccc
Q psy6508 75 -----------------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQ 137 (477)
Q Consensus 75 -----------------l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~ 137 (477)
.....+..++.|++.||.|||++||+||||||+|||++.+...+.++|||++........ ..
T Consensus 235 v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~ 313 (566)
T PLN03225 235 VEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGIN-YI 313 (566)
T ss_pred HHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccc-cC
Confidence 123346689999999999999999999999999999986444455569999864432211 12
Q ss_pred CCeEEEeccccccccCCCC-------------------------CcccccCcceEEEEEEeeeccc
Q psy6508 138 GNTKVICSVFEPREIPSSK-------------------------TSLEYQRSKGELYVEFKFAPFA 178 (477)
Q Consensus 138 g~t~v~~~~y~ppE~~~~~-------------------------~~~Di~~s~G~il~e~~~~Pf~ 178 (477)
..+..+++.|+|||.+... .++|+ ||+|+++|||.+++|.
T Consensus 314 ~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV-wSlGviL~el~~~~~~ 378 (566)
T PLN03225 314 PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI-YSAGLIFLQMAFPNLR 378 (566)
T ss_pred CcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc-HHHHHHHHHHHhCcCC
Confidence 2345678899999965322 23499 9999999999766554
No 415
>PHA02713 hypothetical protein; Provisional
Probab=99.75 E-value=4.1e-19 Score=188.22 Aligned_cols=97 Identities=21% Similarity=0.201 Sum_probs=88.4
Q ss_pred cccchhhHHhhhcCcceeEEEEec-CccceeeEeeeehhhhcccHHHHHhcCCCccc---cCCcccCCCCHHHHHHHhhh
Q psy6508 342 VTLPERGRYVLNSGLWSDCKFYVG-NDVHCKEFKAHKLILSMSSPVFATMFHGELCE---KGDTKILDITPEAFSTMLDS 417 (477)
Q Consensus 342 ~~l~~r~~~~~~~~~~~D~~~~v~-~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~---~~~~~~~~~~~~~~~~~l~~ 417 (477)
.++++.++.|++++.+|||+|.|+ + ++|+|||+||||+|+||++||++++.| ..+|.|.++++++|+.+|+|
T Consensus 10 ~~~l~~l~~lr~~~~l~DV~L~v~~~----~~f~~Hr~vLaa~S~YF~amF~~~~~e~~~~~~v~l~~v~~~~~~~ll~y 85 (557)
T PHA02713 10 RRVVSNISNLLDDDILCDVIITIGDG----EEIKAHKTILAAGSKYFRTLFTTPMIIRDLVTRVNLQMFDKDAVKNIVQY 85 (557)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCC----CEEeehHHHHhhcCHHHHHHhcCCchhhccCceEEeccCCHHHHHHHHHH
Confidence 346688999999999999999998 7 899999999999999999999999986 34589999999999999999
Q ss_pred hhcCceeeCccchhhhhhccccceeec
Q psy6508 418 DHHARVNISSDHHARVSISSDHHTRVS 444 (477)
Q Consensus 418 ~Ytg~~~~~~~~~~~~~~~a~~~~~~~ 444 (477)
+|||+ ++.+++.+|+.|||+++|.+
T Consensus 86 ~Yt~~--i~~~nv~~ll~aA~~lqi~~ 110 (557)
T PHA02713 86 LYNRH--ISSMNVIDVLKCADYLLIDD 110 (557)
T ss_pred hcCCC--CCHHHHHHHHHHHHHHCHHH
Confidence 99997 68999999999999877754
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.74 E-value=6.4e-18 Score=154.82 Aligned_cols=123 Identities=19% Similarity=0.212 Sum_probs=93.2
Q ss_pred CCCcEEEEEEcccCCCChhH------------------------HHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEE
Q psy6508 2 EQHTEVAIKCIDKTKVSENR------------------------FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIIL 57 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~------------------------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 57 (477)
++|++||||+++....+... .....+|+.+++++.++++......... ..+|||
T Consensus 19 ~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~~~~~--~~~iVm 96 (190)
T cd05147 19 ANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPILLK--SHVLVM 96 (190)
T ss_pred CCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcEEEec--CCEEEE
Confidence 47899999999765322111 1123459999999988877544333222 238999
Q ss_pred ecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCcEEccCCCCceeeccCcceeecccccceec
Q psy6508 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL-RENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEK 128 (477)
Q Consensus 58 e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~L-H~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~ 128 (477)
||++|+++.........++...+..++.|++.+|.++ |+.||+||||||+||+++++.+++ +|||++..
T Consensus 97 E~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~~~v~L--iDFG~a~~ 166 (190)
T cd05147 97 EFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHDGKLYI--IDVSQSVE 166 (190)
T ss_pred EEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEECCcEEE--EEcccccc
Confidence 9999887766544446799999999999999999999 799999999999999998765554 59998864
No 417
>KOG4441|consensus
Probab=99.74 E-value=9.4e-19 Score=184.97 Aligned_cols=97 Identities=26% Similarity=0.427 Sum_probs=92.0
Q ss_pred cchhhHHhhhcCcceeEEEEecCccceeeEeeeehhhhcccHHHHHhcCCCccc--cCCcccCCCCHHHHHHHhhhhhcC
Q psy6508 344 LPERGRYVLNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCE--KGDTKILDITPEAFSTMLDSDHHA 421 (477)
Q Consensus 344 l~~r~~~~~~~~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~--~~~~~~~~~~~~~~~~~l~~~Ytg 421 (477)
+++.++.++++++||||++.+++ ++|+|||+||||+|+||++||+++++| +.+|.|.++++++++.+++|+|||
T Consensus 23 ~l~~l~~lr~~~~lcDv~L~v~~----~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~~v~~~~l~~ll~y~Yt~ 98 (571)
T KOG4441|consen 23 LLQGLNELREEGLLCDVTLLVGD----REFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLEGVDPETLELLLDYAYTG 98 (571)
T ss_pred HHHHHHHHHHhCCCceEEEEECC----eeechHHHHHHhccHHHHHHhcCCcccccceEEEEecCCHHHHHHHHHHhhcc
Confidence 67888999999999999999999 999999999999999999999999999 566799999999999999999999
Q ss_pred ceeeCccchhhhhhccccceeec
Q psy6508 422 RVNISSDHHARVSISSDHHTRVS 444 (477)
Q Consensus 422 ~~~~~~~~~~~~~~~a~~~~~~~ 444 (477)
++.++.+++++++.||+.++|.+
T Consensus 99 ~i~i~~~nVq~ll~aA~~lQi~~ 121 (571)
T KOG4441|consen 99 KLEISEDNVQELLEAASLLQIPE 121 (571)
T ss_pred eEEechHhHHHHHHHHHHhhhHH
Confidence 99999999999999999888765
No 418
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.73 E-value=4.4e-18 Score=176.82 Aligned_cols=169 Identities=13% Similarity=0.179 Sum_probs=118.5
Q ss_pred CCcEEEEEEcccCCCChh------------HHHHHHHHHHHHHhcCCCCc-----cceEEEEEe--------CCeEEEEE
Q psy6508 3 QHTEVAIKCIDKTKVSEN------------RFDSIVNEIKALKLLHHQHI-----VTMLDFLWD--------ERYVYIIL 57 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~------------~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~--------~~~~~lv~ 57 (477)
.++.||||.++....... ..+....|+..+.+++|.++ ++++++|.. ++..|+|+
T Consensus 185 ~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~ 264 (507)
T PLN03224 185 KKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVW 264 (507)
T ss_pred cCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEE
Confidence 467899999865432110 11223457777778866544 667776643 35689999
Q ss_pred ecCCCCCHHHHHHhCC------------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc
Q psy6508 58 EYCDGGDLCSFIRSHE------------------------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113 (477)
Q Consensus 58 e~~~g~sL~~~l~~~~------------------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~ 113 (477)
||+++++|.+++.... .+++..++.++.|++.||.|||++||+||||||+||+++.
T Consensus 265 Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~ 344 (507)
T PLN03224 265 KFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV 344 (507)
T ss_pred EcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC
Confidence 9999999999986421 2356778899999999999999999999999999999976
Q ss_pred CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-------------------------CcccccCcceEE
Q psy6508 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-------------------------TSLEYQRSKGEL 168 (477)
Q Consensus 114 ~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-------------------------~~~Di~~s~G~i 168 (477)
+. ++.++|||.+........ .......+++.|+|||..... ...|+ ||+|++
T Consensus 345 ~~-~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~Dv-wSlGvi 421 (507)
T PLN03224 345 DG-QVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDS-YTAGVL 421 (507)
T ss_pred CC-cEEEEeCcCccccccCCc-cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccch-hhHHHH
Confidence 43 344459998754322111 111123346789999986432 23699 999999
Q ss_pred EEEEee
Q psy6508 169 YVEFKF 174 (477)
Q Consensus 169 l~e~~~ 174 (477)
+++|..
T Consensus 422 l~em~~ 427 (507)
T PLN03224 422 LMQMCV 427 (507)
T ss_pred HHHHHh
Confidence 999944
No 419
>PHA02790 Kelch-like protein; Provisional
Probab=99.73 E-value=1.6e-18 Score=180.97 Aligned_cols=99 Identities=13% Similarity=0.114 Sum_probs=86.2
Q ss_pred HhhhcCcceeEEEEecCccceeeEeeeehhhhcccHHHHHhcCCCcccc-CCccc--CCCCHHHHHHHhhhhhcCceeeC
Q psy6508 350 YVLNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEK-GDTKI--LDITPEAFSTMLDSDHHARVNIS 426 (477)
Q Consensus 350 ~~~~~~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~~-~~~~~--~~~~~~~~~~~l~~~Ytg~~~~~ 426 (477)
.++.+|.||||++.+|+ +|+|||+|||++|+|||+||++++.|+ .++.+ .++++++|+.+|+|+|||++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~-----~~~~HR~VLAa~S~YFraMF~~~~~Es~~~v~~~~~~v~~~~l~~lldy~YTg~l~it 89 (480)
T PHA02790 15 ALSMTKKFKTIIEAIGG-----NIIVNSTILKKLSPYFRTHLRQKYTKNKDPVTRVCLDLDIHSLTSIVIYSYTGKVYID 89 (480)
T ss_pred HHHhhhhhceEEEEcCc-----EEeeehhhhhhcCHHHHHHhcCCccccccceEEEecCcCHHHHHHHHHhheeeeEEEe
Confidence 45778999999987765 699999999999999999999999984 34554 39999999999999999999999
Q ss_pred ccchhhhhhccccceeec------------ccccceeeE
Q psy6508 427 SDHHARVSISSDHHTRVS------------ISSDHRARV 453 (477)
Q Consensus 427 ~~~~~~~~~~a~~~~~~~------------~~~~~~~~~ 453 (477)
.+|+++++.||++++|.+ |+.+|-+.+
T Consensus 90 ~~nV~~ll~aA~~Lqi~~v~~~C~~fL~~~l~~~NCl~i 128 (480)
T PHA02790 90 SHNVVNLLRASILTSVEFIIYTCINFILRDFRKEYCVEC 128 (480)
T ss_pred cccHHHHHHHHHHhChHHHHHHHHHHHHhhCCcchHHHH
Confidence 999999999999877654 677777666
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.72 E-value=6.7e-19 Score=195.43 Aligned_cols=144 Identities=16% Similarity=0.222 Sum_probs=107.0
Q ss_pred HhcCC-CCccceEEEE-------EeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEEcc
Q psy6508 33 KLLHH-QHIVTMLDFL-------WDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFD 103 (477)
Q Consensus 33 ~~l~H-pnIv~~~~~~-------~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrD 103 (477)
+.++| +||.+++++| .....++.++|++. ++|.+++... ..+++..++.+++||+.||.|||++||+|||
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD 105 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN 105 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 45566 6888888887 23346888899885 7999999753 4699999999999999999999999999999
Q ss_pred CCCCceeecc-C-----------------cceeecccccceecccCCc--------------ccccCCeEEEeccccccc
Q psy6508 104 LKPQNILIKN-N-----------------TLKLAGLKQGVSEKAKGSA--------------YIEQGNTKVICSVFEPRE 151 (477)
Q Consensus 104 lkp~NIll~~-~-----------------~~rl~~~dfG~~~~~~gs~--------------~~~~g~t~v~~~~y~ppE 151 (477)
|||+||||+. + ...+...|||.++...... ....+.+.++|++|+|||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 9999999953 1 2234445777765322110 000112245788899999
Q ss_pred cCCCC---CcccccCcceEEEEEEe--eeccc
Q psy6508 152 IPSSK---TSLEYQRSKGELYVEFK--FAPFA 178 (477)
Q Consensus 152 ~~~~~---~~~Di~~s~G~il~e~~--~~Pf~ 178 (477)
.+.+. .++|+ ||+||++|||. +.|+.
T Consensus 186 ~~~~~~~~~~sDV-wSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 186 EDNGSSSNCASDV-YRLGVLLFELFCPVSSRE 216 (793)
T ss_pred hhccCCCCchhhh-hhHHHHHHHHhhCCCchh
Confidence 98765 78899 99999999993 44443
No 421
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=5.7e-17 Score=161.78 Aligned_cols=156 Identities=17% Similarity=0.121 Sum_probs=109.0
Q ss_pred CCcEEEEEEcccCCC---ChhHHHHHHHHHHHHHhcCCCCccc-eEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 3 QHTEVAIKCIDKTKV---SENRFDSIVNEIKALKLLHHQHIVT-MLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~-~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
+++.||||++..... .+...+.+.+|+.+|++++|+|+++ +++. +..|+||||++|++|.. +.. ..
T Consensus 43 ~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~G~~L~~-~~~---~~-- 112 (365)
T PRK09188 43 PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTEGVPLHL-ARP---HG-- 112 (365)
T ss_pred CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccCCCCHHH-hCc---cc--
Confidence 567789998753321 2334567999999999999999985 4432 45799999999999973 211 11
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEccC-CCCceeeccCcceeecccccceecccCCccc-cc---C--CeEEEeccccccc
Q psy6508 79 QCQQFVRQLVLALKFLRENNVCHFDL-KPQNILIKNNTLKLAGLKQGVSEKAKGSAYI-EQ---G--NTKVICSVFEPRE 151 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~~givHrDl-kp~NIll~~~~~rl~~~dfG~~~~~~gs~~~-~~---g--~t~v~~~~y~ppE 151 (477)
...++.|+++||.|||++||+|||| ||+|||++.+. ++.++|||+++........ .. + .+..++.-|++||
T Consensus 113 -~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~-~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe 190 (365)
T PRK09188 113 -DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDG-EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPD 190 (365)
T ss_pred -hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCC-CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcc
Confidence 1568899999999999999999999 99999996542 3445699998754332210 00 0 2445666789999
Q ss_pred cCCCC---------CcccccC-cceEEEEE
Q psy6508 152 IPSSK---------TSLEYQR-SKGELYVE 171 (477)
Q Consensus 152 ~~~~~---------~~~Di~~-s~G~il~e 171 (477)
.+... ...|- | ..|-+.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~dg-W~~TGDlg~~ 219 (365)
T PRK09188 191 ALTPRERKILARKSLPSRI-WLATGKKVYN 219 (365)
T ss_pred cCChhhhccccccccccCc-EEeCCCEEEE
Confidence 87654 22454 5 56776664
No 422
>KOG0576|consensus
Probab=99.71 E-value=6e-19 Score=179.15 Aligned_cols=164 Identities=26% Similarity=0.373 Sum_probs=141.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.+++..|+|+++... ...+.-++.|+-+++..+||||+.+++.+......|++||||.||+|++..+-.+++++.++.
T Consensus 38 ~s~elaavkvVkLep--~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tgplselqia 115 (829)
T KOG0576|consen 38 RSGELAAVKVVKLEP--GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIA 115 (829)
T ss_pred ccCchhhheeeeccC--CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHH
Confidence 368889999998764 334566778999999999999999999999999999999999999999999888899999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCC----C
Q psy6508 82 QFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSS----K 156 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~----~ 156 (477)
..++..++||+|||+.|-+|||||-.||++++ +.+++. |||++.... +.+.....++||+.||+||+..- .
T Consensus 116 yvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvkla--Dfgvsaqit--ati~KrksfiGtpywmapEvaaverkgg 191 (829)
T KOG0576|consen 116 YVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLA--DFGVSAQIT--ATIAKRKSFIGTPYWMAPEVAAVERKGG 191 (829)
T ss_pred HHHhhhhccchhhhcCCcccccccccceeecccCceeec--ccCchhhhh--hhhhhhhcccCCccccchhHHHHHhccc
Confidence 99999999999999999999999999999965 566766 999874432 33444567899999999998532 2
Q ss_pred --CcccccCcceEEEEEE
Q psy6508 157 --TSLEYQRSKGELYVEF 172 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~ 172 (477)
...|+ |+.|+.-.|+
T Consensus 192 ynqlcdi-wa~gitAiel 208 (829)
T KOG0576|consen 192 YNQLCDI-WALGITAIEL 208 (829)
T ss_pred ccccccc-cccccchhhh
Confidence 67899 9999999988
No 423
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.68 E-value=2.4e-16 Score=144.60 Aligned_cols=125 Identities=18% Similarity=0.171 Sum_probs=94.3
Q ss_pred CCCcEEEEEEcccCCCChh------------------------HHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEE
Q psy6508 2 EQHTEVAIKCIDKTKVSEN------------------------RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIIL 57 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~------------------------~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 57 (477)
.+|+.||||+++....... ....+.+|...+.++.|+++.....+.... .|+||
T Consensus 19 ~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~lVm 96 (190)
T cd05145 19 GDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPILLKK--NVLVM 96 (190)
T ss_pred CCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEecC--CEEEE
Confidence 3789999999887532110 012346899999999999885554443332 48999
Q ss_pred ecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceeccc
Q psy6508 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAK 130 (477)
Q Consensus 58 e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~ 130 (477)
||++|+++.........++......++.|++.++.++|+ +||+||||||+||+++++.++ ++|||++...+
T Consensus 97 E~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~~~~~~--liDFG~a~~~~ 168 (190)
T cd05145 97 EFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYHDGKPY--IIDVSQAVELD 168 (190)
T ss_pred EEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEECCCEE--EEEcccceecC
Confidence 999987654443333568889999999999999999999 999999999999999855544 45999886544
No 424
>KOG1290|consensus
Probab=99.67 E-value=1.2e-16 Score=157.37 Aligned_cols=107 Identities=25% Similarity=0.460 Sum_probs=90.8
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-----C---CCccceEEEEEe----CCeEEEEEecCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-----H---QHIVTMLDFLWD----ERYVYIILEYCDGGDLCSFI 69 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-----H---pnIv~~~~~~~~----~~~~~lv~e~~~g~sL~~~l 69 (477)
.+++.||+|+++.. +...+....|+++|++++ | ..||++++.|.. +.++|||+|++ |.+|..+|
T Consensus 101 q~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI 176 (590)
T KOG1290|consen 101 QNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLI 176 (590)
T ss_pred cCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHH
Confidence 35788999998644 334566889999999983 3 379999999874 45899999998 69999999
Q ss_pred HhC--CCCCHHHHHHHHHHHHHHHHHHHhC-CcEEccCCCCceeec
Q psy6508 70 RSH--EKLSEFQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILIK 112 (477)
Q Consensus 70 ~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~ 112 (477)
+.. +.+|...++.|++|++.||.|||.. ||+|-||||+|||+.
T Consensus 177 ~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 177 KYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred HHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 874 4699999999999999999999975 999999999999993
No 425
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.65 E-value=4.6e-16 Score=144.82 Aligned_cols=148 Identities=13% Similarity=0.155 Sum_probs=107.0
Q ss_pred CCcEEEEEEcccCCCChh-HHHH------HHHHHHHHHhcCCCCccceEEEEEeC--------CeEEEEEecCCCCCHHH
Q psy6508 3 QHTEVAIKCIDKTKVSEN-RFDS------IVNEIKALKLLHHQHIVTMLDFLWDE--------RYVYIILEYCDGGDLCS 67 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~-~~~~------~~~E~~il~~l~HpnIv~~~~~~~~~--------~~~~lv~e~~~g~sL~~ 67 (477)
+++.+|||++........ ..+. +.+|+..+.+++||+|+.+.+++... +..+|+|||++|.+|.+
T Consensus 53 ~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~ 132 (232)
T PRK10359 53 DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELND 132 (232)
T ss_pred CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHH
Confidence 466899999976654332 2233 57999999999999999999886633 35899999999999988
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccc
Q psy6508 68 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVF 147 (477)
Q Consensus 68 ~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y 147 (477)
+. .+++ ....+++.++..+|+.|++|||+||+||++++++ +..+|||.........-. ...+....|
T Consensus 133 ~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g--i~liDfg~~~~~~e~~a~---d~~vler~y 199 (232)
T PRK10359 133 MP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG--LRIIDLSGKRCTAQRKAK---DRIDLERHY 199 (232)
T ss_pred hh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC--EEEEECCCcccccchhhH---HHHHHHhHh
Confidence 73 2333 2456999999999999999999999999998877 555699977543211110 111111112
Q ss_pred cccccCCCCCcccccCcceEEEEEE
Q psy6508 148 EPREIPSSKTSLEYQRSKGELYVEF 172 (477)
Q Consensus 148 ~ppE~~~~~~~~Di~~s~G~il~e~ 172 (477)
. .++|+ |++|+.+.-+
T Consensus 200 ~--------~~~di-~~lg~~~~~~ 215 (232)
T PRK10359 200 G--------IKNEI-KDLGYYLLIY 215 (232)
T ss_pred c--------ccccc-cceeEeehHH
Confidence 1 35699 9999998765
No 426
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=99.64 E-value=1.6e-16 Score=132.44 Aligned_cols=94 Identities=28% Similarity=0.436 Sum_probs=82.4
Q ss_pred hHHhhhcCcceeEEEEec-CccceeeEeeeehhhhcccHHHHHhcCCC-ccccC--CcccCCCCHHHHHHHhhhhhcCce
Q psy6508 348 GRYVLNSGLWSDCKFYVG-NDVHCKEFKAHKLILSMSSPVFATMFHGE-LCEKG--DTKILDITPEAFSTMLDSDHHARV 423 (477)
Q Consensus 348 ~~~~~~~~~~~D~~~~v~-~~~~~~~~~~hk~vLa~~S~~f~~~f~~~-~~~~~--~~~~~~~~~~~~~~~l~~~Ytg~~ 423 (477)
++.+++++.+||++|.++ + +.|+|||.||+++|+||++||.+. +.+.. ++.++++++++|+.+++|+|+|++
T Consensus 1 ~~~~~~~~~~~D~~i~v~d~----~~~~vhk~iL~~~S~~F~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~Y~~~~ 76 (111)
T PF00651_consen 1 LNDLFNSNEFSDVTIRVGDG----KTFYVHKNILAARSPYFRNLFEGSKFKESTVPEISLPDVSPEAFEAFLEYMYTGEI 76 (111)
T ss_dssp HHHHHHHTTS--EEEEETTT----EEEEE-HHHHHHHBHHHHHHHTTTTSTTSSEEEEEETTSCHHHHHHHHHHHHHSEE
T ss_pred ChHHHcCCCCCCEEEEECCC----EEEeechhhhhccchhhhhcccccccccccccccccccccccccccccccccCCcc
Confidence 356889999999999999 7 999999999999999999999998 45533 568899999999999999999999
Q ss_pred eeC-ccchhhhhhccccceeecc
Q psy6508 424 NIS-SDHHARVSISSDHHTRVSI 445 (477)
Q Consensus 424 ~~~-~~~~~~~~~~a~~~~~~~~ 445 (477)
.++ .+++.+++.+|+++.+..+
T Consensus 77 ~~~~~~~~~~ll~lA~~~~~~~L 99 (111)
T PF00651_consen 77 EINSDENVEELLELADKLQIPEL 99 (111)
T ss_dssp EEE-TTTHHHHHHHHHHTTBHHH
T ss_pred cCCHHHHHHHHHHHHHHhCcHHH
Confidence 998 9999999999999888764
No 427
>PRK10345 hypothetical protein; Provisional
Probab=99.64 E-value=1.8e-15 Score=140.21 Aligned_cols=112 Identities=22% Similarity=0.250 Sum_probs=88.9
Q ss_pred EEEEcccCCCChhHHHHHHHHHHHHHhc-----CCCCccceEEEEEeCC---e-EEEEEec--CCCCCHHHHHHhCCCCC
Q psy6508 8 AIKCIDKTKVSENRFDSIVNEIKALKLL-----HHQHIVTMLDFLWDER---Y-VYIILEY--CDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 8 AiK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~---~-~~lv~e~--~~g~sL~~~l~~~~~l~ 76 (477)
+||++..... ...+.+.+|+.+++.+ .||||++++++++++. . +.+|+|| +.+++|.+++++. .++
T Consensus 28 ~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~ 104 (210)
T PRK10345 28 CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-RYE 104 (210)
T ss_pred EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-ccc
Confidence 6898866432 2346789999999999 5799999999998763 4 4489999 5579999999764 566
Q ss_pred HHHHHHHHHHHHHHH-HHHHhCCcEEccCCCCceeecc---Ccceeeccccc
Q psy6508 77 EFQCQQFVRQLVLAL-KFLRENNVCHFDLKPQNILIKN---NTLKLAGLKQG 124 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL-~~LH~~givHrDlkp~NIll~~---~~~rl~~~dfG 124 (477)
+. ..++.|++.++ +|||+++|+||||||+|||++. ++.+++++|++
T Consensus 105 e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 105 ED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred Hh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 65 35678888888 8999999999999999999963 34467777854
No 428
>PHA03098 kelch-like protein; Provisional
Probab=99.64 E-value=8.7e-17 Score=171.00 Aligned_cols=87 Identities=20% Similarity=0.266 Sum_probs=81.2
Q ss_pred hhcCcceeEEEEe--cCccceeeEeeeehhhhcccHHHHHhcCCCccccCCcccCCCCHHHHHHHhhhhhcCceeeCccc
Q psy6508 352 LNSGLWSDCKFYV--GNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKILDITPEAFSTMLDSDHHARVNISSDH 429 (477)
Q Consensus 352 ~~~~~~~D~~~~v--~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~Ytg~~~~~~~~ 429 (477)
|.+|.||||+|.| +| ++|+|||+|||++|+||++||.+++. +.+|.|++ ++++|+.+|+|+|||++.++.++
T Consensus 4 ~~~~~~~Dv~l~~~~~~----~~~~~Hk~vLaa~S~yF~~mf~~~~~-~~~i~l~~-~~~~~~~~l~y~Ytg~~~i~~~~ 77 (534)
T PHA03098 4 FELQKFCDESIIIVNGG----GIIKVHKIILSSSSEYFKKMFKNNFK-ENEINLNI-DYDSFNEVIKYIYTGKINITSNN 77 (534)
T ss_pred cccCCCCCEEEEEEcCC----EEEEeHHHHHHhhhHHHHHHHhCCCC-CceEEecC-CHHHHHHHHHHhcCCceEEcHHH
Confidence 3389999999999 88 99999999999999999999999998 67788999 99999999999999999999999
Q ss_pred hhhhhhccccceeec
Q psy6508 430 HARVSISSDHHTRVS 444 (477)
Q Consensus 430 ~~~~~~~a~~~~~~~ 444 (477)
+.+++.+||++++..
T Consensus 78 ~~~ll~~A~~l~~~~ 92 (534)
T PHA03098 78 VKDILSIANYLIIDF 92 (534)
T ss_pred HHHHHHHHHHhCcHH
Confidence 999999999877655
No 429
>COG2123 RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=3.1e-14 Score=131.64 Aligned_cols=208 Identities=25% Similarity=0.326 Sum_probs=171.7
Q ss_pred CcceeecccccceecccCCcccccCCeEEEecccccc-ccCCCCCcccccCcceEEEEEEeeeccccccccCCCCCcchH
Q psy6508 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPR-EIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEK 192 (477)
Q Consensus 114 ~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~pp-E~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~ 192 (477)
++.|.+.+.+|++..++||+.+..|+|++.+.+-.-. |.+. |- -.-|++....-..|.++....+.+++....
T Consensus 31 ~efR~ieI~~~vi~ka~GSa~VklG~Tqvv~gvK~eig~Pf~-----Dt-P~eG~~~~n~El~Plas~~fE~Gppde~ai 104 (272)
T COG2123 31 DEFRPLEIETGVIPKANGSALVKLGNTQVVVGVKAEIGEPFP-----DT-PNEGVLVVNVELSPLASPSFEPGPPDELAI 104 (272)
T ss_pred ccccceEEEeCceecCCCcEEEEecCeEEEEEEEcccCCCCC-----CC-CCCceEEeeeeeeccccccccCCCCchhHH
Confidence 4788999999999999999999999999999874322 2222 33 556888877777788877777667777778
Q ss_pred HHHHHHHHHhhhhh-------hc-ccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCC-----------------
Q psy6508 193 ELGNHLKRALEPAV-------CR-HEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIP----------------- 247 (477)
Q Consensus 193 ~l~~~i~~~l~~~i-------~~-~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~----------------- 247 (477)
++.+.+.+.++..- |. +.-.-|.+.+.+.+|..||+.+.++.-|+..||.++.+|
T Consensus 105 elsrvvdr~lr~s~aiDlekL~I~~g~kvwvv~vDv~vld~DGnl~Da~~lA~~aAL~~t~vP~~~~~~~~~~v~~~~~~ 184 (272)
T COG2123 105 ELSRVVDRGLRESKAIDLEKLCIEEGKKVWVVFVDVHVLDYDGNLIDAASLAAVAALLNTRVPKAVEVGDGEIVIEVEEE 184 (272)
T ss_pred HHHHHHHHHHHhccCcchhheeEecCCEEEEEEEEEEEEcCCCCHHHHHHHHHHHHHHhcCCCceeecCCcceeecccCC
Confidence 89999999887653 22 233457788999999999999999999999999999987
Q ss_pred -----CCceEEEEEEEeeCCeEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEe--eecHHHHHHHHH
Q psy6508 248 -----MYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVG--TIQQERLADHIE 320 (477)
Q Consensus 248 -----m~~~v~a~s~~~~~~~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g--~~~~~~~~~~l~ 320 (477)
+...+.++|.++.++.+++||+.+||..+ .+.+|+.+ ++.++|+.++..| .++.+.+.++++
T Consensus 185 ~~pl~~~~~pi~vt~a~ig~~lvvDPsleEe~v~----------d~~ltit~-~~~~~Iv~iqK~g~~~~~~~~~~~~~~ 253 (272)
T COG2123 185 PVPLPVSNPPISVTFAKIGNVLVVDPSLEEELVA----------DGRLTITV-NEDGEIVAIQKVGGGSITESDLEKALK 253 (272)
T ss_pred CcccccCCCceEEEEEEECCEEEeCCCcchhhhc----------CceEEEEE-CCCCcEEEEEEcCCCcCCHHHHHHHHH
Confidence 66778899999999999999999999954 78899985 6678899999884 588999999999
Q ss_pred HHHhcccchhhHHHHhHhh
Q psy6508 321 QLIGCCESLCTDRVQKLVS 339 (477)
Q Consensus 321 ~~~~~~~~i~~~~i~~~l~ 339 (477)
.|.+.+.++++. +.+.|.
T Consensus 254 ~A~~~~~kl~~~-~~~~L~ 271 (272)
T COG2123 254 TALSKAEKLREA-LKEALK 271 (272)
T ss_pred HHHHHHHHHHHH-HHHhhc
Confidence 999999999998 777654
No 430
>PF01138 RNase_PH: 3' exoribonuclease family, domain 1 This Prosite family only includes Ribonuclease PH; InterPro: IPR001247 The PH (phosphorolytic) domain is responsible for 3'-5' exoribonuclease activity, although in some proteins this domain has lost its catalytic function. An active PH domain uses inorganic phosphate as a nucleophile, adding it across the phosphodiester bond between the end two nucleotides in order to release ribonucleoside 5'-diphosphate (rNDP) from the 3' end of the RNA substrate. PH domains can be found in bacterial/organelle RNases and PNPases (polynucleotide phosphorylases) [], as well as in archaeal and eukaryotic RNA exosomes [, ], the later acting as nano-compartments for the degradation or processing of RNA (including mRNA, rRNA, snRNA and snoRNA). Bacterial/organelle PNPases share a common barrel structure with RNA exosomes, consisting of a hexameric ring of PH domains that act as a degradation chamber, and an S1-domain/KH-domain containing cap that binds the RNA substrate (and sometimes accessory proteins) in order to regulate and restrict entry into the degradation chamber []. Unstructured RNA substrates feed in through the pore made by the S1 domains, are degraded by the PH domain ring, and exit as nucleotides via the PH pore at the opposite end of the barrel [, ]. This entry represents the phosphorolytic (PH) domain 1, which has a core 2-layer alpha/beta structure with a left-handed crossover, similar to that found in ribosomal protein S5. This domain is found in bacterial/organelle PNPases and in archaeal/eukaryotic exosomes []. More information about these proteins can be found at Protein of the Month: RNA Exosomes [].; PDB: 2C38_G 2BR2_O 2C37_M 3L7Z_A 2JEB_A 2C39_A 2JEA_A 2JE6_A 3U1K_A 4AM3_B ....
Probab=99.63 E-value=1.6e-15 Score=130.66 Aligned_cols=130 Identities=44% Similarity=0.630 Sum_probs=113.0
Q ss_pred cceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccccccC-CCCCcchHH
Q psy6508 115 TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTG-WLRDSEEKE 193 (477)
Q Consensus 115 ~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~-~~~~~~~~~ 193 (477)
++|.+.+.+|....++||++++.|+|.+.+.+++|.+....... | ..-|.+.+++.+.|+.....+. ..++..+.+
T Consensus 1 e~R~i~i~~~~~~~a~GSa~v~~G~T~V~~~V~~~~~~~~~~~~-~--~~~g~~~v~v~~~~~~~~~~~~~~~~~~~~~~ 77 (132)
T PF01138_consen 1 ELRPISIETGVLPRADGSARVSLGNTKVICSVKGPIEPPPSNER-D--DAEGRLTVEVEFSPFASPSFRRGGRPDEEERE 77 (132)
T ss_dssp CBEEEEEEESSSSSSSEEEEEEETTEEEEEEEEEEEEGCSCSTT-S--SSSEEEEEEEEECCCGSTSSSSSSSTHHHHHH
T ss_pred CCccEEEEeCCCCCCCeEEEEEECCeEEEEEEEecccccchhcc-c--CCCceEEEEEEeccccccccccccccchhHHH
Confidence 46788889999999999999999999999999999998332211 1 2238999999999998655432 456778889
Q ss_pred HHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCC-chHHHHHHHHHHHHhhCCCC
Q psy6508 194 LGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDG-SALSAAINCANLALVDAAIP 247 (477)
Q Consensus 194 l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg-~~~~a~inaa~lAL~dagi~ 247 (477)
++..+++.+++.+..+.+|+|.|++.+++|++|| +.+++++||+++||.|+|||
T Consensus 78 l~~~l~~~l~~~~~~~~~~~~~i~v~v~vl~~dG~~~~~a~~~A~~~AL~~~~iP 132 (132)
T PF01138_consen 78 LSSLLERALRSSILLEGYPRWQIHVDVQVLSDDGGNLLDAAINAACLALLDAGIP 132 (132)
T ss_dssp HHHHHHHHHHHTBSTTTTSSEEEEEEEEEEECSSSSHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHhhhccccccccccCceEEEEEEEEEecCCCCHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999 99999999999999999998
No 431
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.62 E-value=1.1e-15 Score=149.34 Aligned_cols=173 Identities=27% Similarity=0.427 Sum_probs=139.6
Q ss_pred cEEEEEEcccCCCChh-HHHHHHHHHHHHHhcCCC-CccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC---CCCHHH
Q psy6508 5 TEVAIKCIDKTKVSEN-RFDSIVNEIKALKLLHHQ-HIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE---KLSEFQ 79 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~Hp-nIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---~l~~~~ 79 (477)
+.+++|.+........ ....+.+|..+++.+.|+ +++++++.+......+++++++.++++.+++.... .++...
T Consensus 23 ~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 102 (384)
T COG0515 23 KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESE 102 (384)
T ss_pred cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHH
Confidence 4688999877765443 567899999999999888 79999999988888999999999999998887764 799999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccc----cCCeEEEeccccccccCCC
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIE----QGNTKVICSVFEPREIPSS 155 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~----~g~t~v~~~~y~ppE~~~~ 155 (477)
...++.|++.++.|+|+.|++|||+||+||+++.........|||.+.......... ...+..++..|.+||...+
T Consensus 103 ~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~ 182 (384)
T COG0515 103 ALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLG 182 (384)
T ss_pred HHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcC
Confidence 999999999999999999999999999999998765344456999886443332111 2356788899999998865
Q ss_pred ---C---CcccccCcceEEEEEE--eeeccc
Q psy6508 156 ---K---TSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 156 ---~---~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
. ...|+ |++|++++++ +..||.
T Consensus 183 ~~~~~~~~~~D~-~s~g~~~~~~~~~~~p~~ 212 (384)
T COG0515 183 LSLAYASSSSDI-WSLGITLYELLTGLPPFE 212 (384)
T ss_pred CCCCCCCchHhH-HHHHHHHHHHHhCCCCCC
Confidence 2 67899 9999777765 445543
No 432
>KOG1163|consensus
Probab=99.59 E-value=1.5e-14 Score=131.19 Aligned_cols=172 Identities=16% Similarity=0.220 Sum_probs=134.3
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~l~~~~ 79 (477)
.+|..||||+=...... ..+.-|.++.+.|+ .+.|+.+..++.+..+-.+||+.. |.+|.++..- .+.++.++
T Consensus 38 ~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkT 112 (341)
T KOG1163|consen 38 TSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKT 112 (341)
T ss_pred cCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHh
Confidence 37899999985443322 34678999999996 478999998988999999999998 6999998864 24799999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC--cceeecccccceecccCCcc-----cccCCeEEEecccccccc
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN--TLKLAGLKQGVSEKAKGSAY-----IEQGNTKVICSVFEPREI 152 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~--~~rl~~~dfG~~~~~~gs~~-----~~~g~t~v~~~~y~ppE~ 152 (477)
+..++-|++.-++|+|.++++||||||+|+|..-+ .-++..+|||+++....... ...+..-.+|..|.+...
T Consensus 113 vLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinA 192 (341)
T KOG1163|consen 113 VLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINA 192 (341)
T ss_pred HHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhh
Confidence 99999999999999999999999999999999543 44666779999976543321 123345678888888766
Q ss_pred CCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 153 PSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 153 ~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
..+. ...|. -|+|-++..+ +..||.+
T Consensus 193 h~g~eqSRRDDm-eSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 193 HLGIEQSRRDDM-ESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred hhhhhhhhhhhh-hhhcceeeeeecCCCcccc
Confidence 5443 44588 9999988877 6677764
No 433
>KOG4158|consensus
Probab=99.59 E-value=1.7e-15 Score=146.10 Aligned_cols=143 Identities=20% Similarity=0.270 Sum_probs=111.2
Q ss_pred CCCCccceEEEEEeC---------------------------CeEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHH
Q psy6508 36 HHQHIVTMLDFLWDE---------------------------RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLV 88 (477)
Q Consensus 36 ~HpnIv~~~~~~~~~---------------------------~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~ 88 (477)
+||||+++.++|.++ ..+|+||..++ .+|++|+..+ ..+....+-++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~-~~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR-HRSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC-CCchHHHHHHHHHHH
Confidence 599999999988643 36899999997 8999999874 567788888999999
Q ss_pred HHHHHHHhCCcEEccCCCCceee--cc-CcceeecccccceecccCC----cccccCCeEEEeccccccccCCCC-----
Q psy6508 89 LALKFLRENNVCHFDLKPQNILI--KN-NTLKLAGLKQGVSEKAKGS----AYIEQGNTKVICSVFEPREIPSSK----- 156 (477)
Q Consensus 89 ~aL~~LH~~givHrDlkp~NIll--~~-~~~rl~~~dfG~~~~~~gs----~~~~~g~t~v~~~~y~ppE~~~~~----- 156 (477)
+|+.|||.+||.|||+|.+|||+ ++ +-..++..|||++...+.- .|....-..-+...-++||+....
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 99999999999999999999999 33 4556777899998644431 111111223344557888876543
Q ss_pred ----CcccccCcceEEEEEE--eeecccccc
Q psy6508 157 ----TSLEYQRSKGELYVEF--KFAPFASQI 181 (477)
Q Consensus 157 ----~~~Di~~s~G~il~e~--~~~Pf~~~~ 181 (477)
.++|. |+.|.+-||+ ...||.+.+
T Consensus 432 vvny~kAD~-WA~GalaYEIfg~~NPFY~rG 461 (598)
T KOG4158|consen 432 VVNYEKADT-WAAGALAYEIFGRSNPFYKRG 461 (598)
T ss_pred eeccchhhh-hhhhhhHHHHhccCCcccccc
Confidence 67899 9999999999 668998743
No 434
>KOG1164|consensus
Probab=99.55 E-value=5.3e-15 Score=147.12 Aligned_cols=171 Identities=20% Similarity=0.210 Sum_probs=131.4
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCC----CCccceEEEE-EeCCeEEEEEecCCCCCHHHHHHhC--CCCCH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH----QHIVTMLDFL-WDERYVYIILEYCDGGDLCSFIRSH--EKLSE 77 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H----pnIv~~~~~~-~~~~~~~lv~e~~~g~sL~~~l~~~--~~l~~ 77 (477)
+.+|+|.......... ..+..|..++..+.. ++++++++.+ ..+..-|+||+.+ |.+|.++.... +.++.
T Consensus 45 ~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~ 121 (322)
T KOG1164|consen 45 KEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSR 121 (322)
T ss_pred eeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCH
Confidence 5789998765432221 157789999999863 6999999999 4777899999998 69999988654 47999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCc----ceeeccccccee--cc---cCCc-c-ccc-CCeEEEec
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT----LKLAGLKQGVSE--KA---KGSA-Y-IEQ-GNTKVICS 145 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~----~rl~~~dfG~~~--~~---~gs~-~-~~~-g~t~v~~~ 145 (477)
.++..++.|++.+|++||+.|++||||||+|+++.... ..+..+|||+++ .. .+.. . ... .....+|.
T Consensus 122 ~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ 201 (322)
T KOG1164|consen 122 KTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTL 201 (322)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCcc
Confidence 99999999999999999999999999999999996532 456677999998 32 2211 1 111 22345888
Q ss_pred cccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 146 VFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 146 ~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.|.++....+. +..|+ ||++-+++++ +..||.+
T Consensus 202 ry~S~~~H~~~e~~r~DDl-es~~Y~l~el~~g~LPW~~ 239 (322)
T KOG1164|consen 202 RYASINVHLGIEQGRRDDL-ESLFYMLLELLKGSLPWEA 239 (322)
T ss_pred ccccHHHhCCCccCCchhh-hhHHHHHHHHhcCCCCCcc
Confidence 99999987766 67799 9988888887 4467654
No 435
>KOG4350|consensus
Probab=99.55 E-value=3.1e-15 Score=143.38 Aligned_cols=92 Identities=21% Similarity=0.314 Sum_probs=80.5
Q ss_pred cchhhHHhhhcCcceeEEEEecCccceeeEeeeehhhhcccHHHHHhcCCCccc--cCCcccCCCCHHHHHHHhhhhhcC
Q psy6508 344 LPERGRYVLNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCE--KGDTKILDITPEAFSTMLDSDHHA 421 (477)
Q Consensus 344 l~~r~~~~~~~~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~--~~~~~~~~~~~~~~~~~l~~~Ytg 421 (477)
+-+....++.+..++||+|+|++ ..|+|||+|||+||+|||+|++++|.| +..|.|.+.+.++|+.+|+|||||
T Consensus 31 fS~~~~~l~~~e~y~DVtfvve~----~rfpAHRvILAaRs~yFRAlLYgGm~Es~q~~ipLq~t~~eAF~~lLrYiYtg 106 (620)
T KOG4350|consen 31 FSQSFDELFTSEDYSDVTFVVED----TRFPAHRVILAARSSYFRALLYGGMQESHQQLIPLQETNSEAFRALLRYIYTG 106 (620)
T ss_pred hhHHHHHHhhcCcccceEEEEec----cccchhhhhHHHHHHHHHHHHhhhhhhhhhcccccccccHHHHHHHHHHHhhc
Confidence 35566678899999999999999 999999999999999999999999999 455788899999999999999999
Q ss_pred ceeeCc---cchhhhhhcccc
Q psy6508 422 RVNISS---DHHARVSISSDH 439 (477)
Q Consensus 422 ~~~~~~---~~~~~~~~~a~~ 439 (477)
++.+.. +..-++|..|..
T Consensus 107 ~~~l~~~~ed~lld~LslAh~ 127 (620)
T KOG4350|consen 107 KIDLAGVEEDILLDYLSLAHR 127 (620)
T ss_pred ceecccchHHHHHHHHHHHHh
Confidence 998865 456677777763
No 436
>KOG0590|consensus
Probab=99.54 E-value=2.5e-15 Score=159.54 Aligned_cols=150 Identities=26% Similarity=0.394 Sum_probs=121.3
Q ss_pred HHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccC
Q psy6508 25 IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDL 104 (477)
Q Consensus 25 ~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDl 104 (477)
+..|+.+-..+.|||++..+..+.+....+-.||||++ +|..++...+.+...++..++.|++.|++|+|+.|+.|||+
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrdl 446 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDL 446 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccC
Confidence 67788888889999998887766655555555999997 99999988778999999999999999999999999999999
Q ss_pred CCCceeeccC-cceeecccccceec--ccCCcccccCCeEEEeccccccccCCCC----CcccccCcceEEEEEE--eee
Q psy6508 105 KPQNILIKNN-TLKLAGLKQGVSEK--AKGSAYIEQGNTKVICSVFEPREIPSSK----TSLEYQRSKGELYVEF--KFA 175 (477)
Q Consensus 105 kp~NIll~~~-~~rl~~~dfG~~~~--~~gs~~~~~g~t~v~~~~y~ppE~~~~~----~~~Di~~s~G~il~e~--~~~ 175 (477)
||+|+++..+ .+++ +|||.+.. .............++...|.|||...+. ...|+ |+.|++++.| +..
T Consensus 447 K~enll~~~~g~lki--~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDi-wS~~ii~~~m~~~~~ 523 (601)
T KOG0590|consen 447 KLENLLVTENGILKI--IDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDV-WSCGIIYICMILGRF 523 (601)
T ss_pred ccccEEEecCCceEE--eecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhh-hhccceEEEEecCCC
Confidence 9999999876 4554 48887653 2333322233456788899999999877 67899 9999999999 445
Q ss_pred ccc
Q psy6508 176 PFA 178 (477)
Q Consensus 176 Pf~ 178 (477)
||.
T Consensus 524 ~Wk 526 (601)
T KOG0590|consen 524 PWK 526 (601)
T ss_pred ccc
Confidence 554
No 437
>KOG1024|consensus
Probab=99.53 E-value=9.3e-15 Score=140.66 Aligned_cols=183 Identities=20% Similarity=0.267 Sum_probs=144.4
Q ss_pred EEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEE-eCCeEEEEEecCCCCCHHHHHHhC--------CCCCH
Q psy6508 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW-DERYVYIILEYCDGGDLCSFIRSH--------EKLSE 77 (477)
Q Consensus 7 vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~lv~e~~~g~sL~~~l~~~--------~~l~~ 77 (477)
|-+|.++. ..++-+...+..|.-.+..+.|||+.++.+++. +....++++.+..-|+|..++... +.++.
T Consensus 317 v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt 395 (563)
T KOG1024|consen 317 VLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTT 395 (563)
T ss_pred HHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhH
Confidence 33444432 223444556788888888999999999999865 445788999999889999999721 24777
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 78 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+...++.|++.|+.|||++|++|.||..+|++|++. +++.+.|-.+++......|-..|....-...||++|.+...
T Consensus 396 ~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~-LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~ 474 (563)
T KOG1024|consen 396 IQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQ-LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSH 474 (563)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhh-eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhh
Confidence 8889999999999999999999999999999999875 67777798888887777777777776666679999998776
Q ss_pred --CcccccCcceEEEEEE---eeeccccccccCCCCCcchHHHHHHHHHH
Q psy6508 157 --TSLEYQRSKGELYVEF---KFAPFASQIRTGWLRDSEEKELGNHLKRA 201 (477)
Q Consensus 157 --~~~Di~~s~G~il~e~---~~~Pf~~~~r~~~~~~~~~~~l~~~i~~~ 201 (477)
.++|+ |++|+++||+ |-.|+. +-++.+++..++..
T Consensus 475 yssasDv-WsfGVllWELmtlg~~Pya---------eIDPfEm~~ylkdG 514 (563)
T KOG1024|consen 475 YSSASDV-WSFGVLLWELMTLGKLPYA---------EIDPFEMEHYLKDG 514 (563)
T ss_pred hcchhhh-HHHHHHHHHHHhcCCCCcc---------ccCHHHHHHHHhcc
Confidence 77899 9999999998 445555 44556666666643
No 438
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.51 E-value=1.4e-13 Score=128.23 Aligned_cols=120 Identities=18% Similarity=0.242 Sum_probs=97.0
Q ss_pred CCcEEEEEEcccCCCChh------HHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 3 QHTEVAIKCIDKTKVSEN------RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~------~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
+|..|++|+......... ...++.+|+.++..++|++++....++...+..+++|||++|++|.+++....
T Consensus 18 ~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~--- 94 (211)
T PRK14879 18 LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG--- 94 (211)
T ss_pred CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc---
Confidence 567899998654332111 12468899999999999998887777777788899999999999999987642
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceec
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEK 128 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~ 128 (477)
. ....++.+++.+|.++|+.|++|||++|.||+++.+.+++ +|||.+..
T Consensus 95 ~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~~~~~~l--iDf~~a~~ 143 (211)
T PRK14879 95 M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILSGGKIYL--IDFGLAEF 143 (211)
T ss_pred H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEECCCEEE--EECCcccC
Confidence 2 7889999999999999999999999999999999655554 59998754
No 439
>smart00090 RIO RIO-like kinase.
Probab=99.51 E-value=6.4e-14 Score=132.77 Aligned_cols=121 Identities=15% Similarity=0.132 Sum_probs=90.9
Q ss_pred CCCcEEEEEEcccCCCCh--------------------h--HHHHHHHHHHHHHhcCC--CCccceEEEEEeCCeEEEEE
Q psy6508 2 EQHTEVAIKCIDKTKVSE--------------------N--RFDSIVNEIKALKLLHH--QHIVTMLDFLWDERYVYIIL 57 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~--------------------~--~~~~~~~E~~il~~l~H--pnIv~~~~~~~~~~~~~lv~ 57 (477)
.+|+.||+|+++...... . ....+.+|+.+++++.+ ..++++++. . ..++||
T Consensus 52 ~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~~~---~-~~~lV~ 127 (237)
T smart00090 52 GSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPIAW---R-RNVLVM 127 (237)
T ss_pred CCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeEe---c-CceEEE
Confidence 478999999987643210 0 11246789999999975 334555543 2 358999
Q ss_pred ecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC-cEEccCCCCceeeccCcceeecccccceec
Q psy6508 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILIKNNTLKLAGLKQGVSEK 128 (477)
Q Consensus 58 e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~rl~~~dfG~~~~ 128 (477)
||++|.+|..+......+....+..++.|++.++.+||++| ++||||||+||+++.+.++ .+|||.+..
T Consensus 128 E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~~~~i~--LiDFg~a~~ 197 (237)
T smart00090 128 EFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVHDGKVV--IIDVSQSVE 197 (237)
T ss_pred EEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEECCCEE--EEEChhhhc
Confidence 99998888776544445667778899999999999999999 9999999999999854444 459998753
No 440
>KOG1165|consensus
Probab=99.51 E-value=6e-14 Score=132.72 Aligned_cols=170 Identities=16% Similarity=0.286 Sum_probs=133.8
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~ 80 (477)
++++||||.=+.... ..++..|.+..+.| ..++|+..|-+...+-+-.||+|+. |.||.++..-. ++|+.+++
T Consensus 52 nne~VAIKfEPrkS~----APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV 126 (449)
T KOG1165|consen 52 NNEPVAIKFEPRKSE----APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTV 126 (449)
T ss_pred cCceEEEEeccccCC----cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhH
Confidence 688999998554432 23577899999998 5799999998888888899999998 69999998764 47999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeecc----CcceeecccccceecccCC------cccccCCeEEEecccccc
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKN----NTLKLAGLKQGVSEKAKGS------AYIEQGNTKVICSVFEPR 150 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~----~~~rl~~~dfG~~~~~~gs------~~~~~g~t~v~~~~y~pp 150 (477)
..++.|++.-++|+|++.+|.|||||+|+||.. +.-.+-.+|||+++..... +|.+ ...-.||..||+.
T Consensus 127 ~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE-~KSLsGTARYMSI 205 (449)
T KOG1165|consen 127 AMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYRE-HKSLSGTARYMSI 205 (449)
T ss_pred HHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcccc-ccccccceeeeEe
Confidence 999999999999999999999999999999942 2333445699999754332 1212 2344678889998
Q ss_pred ccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 151 EIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 151 E~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
....++ ...|. -++|-++..+ |..||.+
T Consensus 206 NTHlGrEQSRRDDL-EaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 206 NTHLGREQSRRDDL-EALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred eccccchhhhhhhH-HHhhhhhhhhccCCCcccc
Confidence 777666 45688 9999988766 7788875
No 441
>KOG2075|consensus
Probab=99.49 E-value=9.7e-15 Score=143.40 Aligned_cols=107 Identities=27% Similarity=0.403 Sum_probs=97.9
Q ss_pred hhccccchhhHHhhhcCcceeEEEEecCc-cceeeEeeeehhhhcccHHHHHhcCCCccc--cCCcccCCCCHHHHHHHh
Q psy6508 339 SDHVTLPERGRYVLNSGLWSDCKFYVGND-VHCKEFKAHKLILSMSSPVFATMFHGELCE--KGDTKILDITPEAFSTML 415 (477)
Q Consensus 339 ~~~~~l~~r~~~~~~~~~~~D~~~~v~~~-~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~--~~~~~~~~~~~~~~~~~l 415 (477)
.++.++.+|...++++..++||.|+|+++ +..+.|||||.|||..|.+|.+||++++.+ +.++.++|+.|.+|..+|
T Consensus 96 ~~~~t~~er~~~l~~n~~~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaMf~g~~a~~~s~ei~lpdvepaaFl~~L 175 (521)
T KOG2075|consen 96 AQKETMRERQAALFNNELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAMFYGGLAEDASLEIRLPDVEPAAFLAFL 175 (521)
T ss_pred cchhhHHHhhHhhccCcccceeEEEeccCCCcccccchhhhhhhcchHHHHHHhccCcccccCceeecCCcChhHhHHHH
Confidence 34567889999999999999999999853 456889999999999999999999999988 577899999999999999
Q ss_pred hhhhcCceeeCccchhhhhhccccceeecc
Q psy6508 416 DSDHHARVNISSDHHARVSISSDHHTRVSI 445 (477)
Q Consensus 416 ~~~Ytg~~~~~~~~~~~~~~~a~~~~~~~~ 445 (477)
+|+|++.+++..+++..++-+|+++.+.++
T Consensus 176 ~flYsdev~~~~dtvi~tl~~AkKY~VpaL 205 (521)
T KOG2075|consen 176 RFLYSDEVKLAADTVITTLYAAKKYLVPAL 205 (521)
T ss_pred HHHhcchhhhhHHHHHHHHHHHHHhhhHHH
Confidence 999999999999999999999999988764
No 442
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.49 E-value=2.1e-13 Score=124.66 Aligned_cols=157 Identities=14% Similarity=0.084 Sum_probs=103.1
Q ss_pred CCcEEEEEEcccCCCC--hhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 3 QHTEVAIKCIDKTKVS--ENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
.+.+++.+.+.....- .-....+.+|+++|++|+ |+++++++++ +..|++|||+.|.+|.+.+.. .
T Consensus 24 ~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~------~- 92 (218)
T PRK12274 24 GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR------G- 92 (218)
T ss_pred CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh------h-
Confidence 3556666655443321 112235889999999995 6889999986 346999999999998764321 1
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccC-CCCceeeccCcceeecccccceecccCCccc----cc-------CCeEEEeccc
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDL-KPQNILIKNNTLKLAGLKQGVSEKAKGSAYI----EQ-------GNTKVICSVF 147 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDl-kp~NIll~~~~~rl~~~dfG~~~~~~gs~~~----~~-------g~t~v~~~~y 147 (477)
...++.|++.+|+++|++||+|||| ||+|||++.++ ++.++|||.+......+.. .. ..-+..|+.|
T Consensus 93 ~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g-~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~ 171 (218)
T PRK12274 93 DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDG-SPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAA 171 (218)
T ss_pred hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCC-CEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 2357889999999999999999999 79999997643 3445599998754433210 00 0012245556
Q ss_pred cccccCCCC-----CcccccCcceEEEEEE
Q psy6508 148 EPREIPSSK-----TSLEYQRSKGELYVEF 172 (477)
Q Consensus 148 ~ppE~~~~~-----~~~Di~~s~G~il~e~ 172 (477)
..|+...-- ...++ .+.|.-+|.+
T Consensus 172 l~~~~~~~l~~~~~~~~~w-~~~g~~~~~~ 200 (218)
T PRK12274 172 LTPVERRVLKRTSWIRELW-FATGKPVYRF 200 (218)
T ss_pred CCHHHHhhhccchhHHHHH-HHhcchHHHH
Confidence 655532211 22344 5678877777
No 443
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.49 E-value=1.9e-13 Score=126.15 Aligned_cols=117 Identities=21% Similarity=0.263 Sum_probs=90.9
Q ss_pred CCcEEEEEEcccCCCC-h-----hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCC
Q psy6508 3 QHTEVAIKCIDKTKVS-E-----NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLS 76 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~-~-----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~ 76 (477)
+|+.|++|+....... + ....++.+|+.+++.++|+++....-++...+..+++|||++|++|.+++.....
T Consensus 16 ~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~-- 93 (199)
T TIGR03724 16 LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND-- 93 (199)
T ss_pred CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH--
Confidence 5678999986543221 1 1135678999999999988766555555566678999999999999998765321
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceec
Q psy6508 77 EFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEK 128 (477)
Q Consensus 77 ~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~ 128 (477)
.++.|++.+|.++|+.|++|||++|.||+++++.+++ +|||.+..
T Consensus 94 -----~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~~~~~~l--iDfg~a~~ 138 (199)
T TIGR03724 94 -----ELLREIGRLVGKLHKAGIVHGDLTTSNIIVRDDKLYL--IDFGLGKY 138 (199)
T ss_pred -----HHHHHHHHHHHHHHHCCeecCCCCcceEEEECCcEEE--EECCCCcC
Confidence 7899999999999999999999999999999555554 59997654
No 444
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=99.48 E-value=2.9e-14 Score=113.18 Aligned_cols=83 Identities=28% Similarity=0.503 Sum_probs=76.4
Q ss_pred eEEEEecCccceeeEeeeehhhhcccHHHHHhcCCCccc--cCCcccCCCCHHHHHHHhhhhhcCceeeCccchhhhhhc
Q psy6508 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCE--KGDTKILDITPEAFSTMLDSDHHARVNISSDHHARVSIS 436 (477)
Q Consensus 359 D~~~~v~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~--~~~~~~~~~~~~~~~~~l~~~Ytg~~~~~~~~~~~~~~~ 436 (477)
|+++.+++ +.|++||.+|+++|+||++||.+++.+ ...+.+++.++++|+.+|+|+|||++.++.+++..++.+
T Consensus 1 dv~i~v~~----~~~~~h~~iL~~~s~~f~~~~~~~~~~~~~~~i~l~~~~~~~f~~~l~~ly~~~~~~~~~~~~~l~~~ 76 (90)
T smart00225 1 DVTLVVGG----KKFKAHKAVLAACSPYFKALFSGDFKESKKSEIYLDDVSPEDFRALLEFLYTGKLDLPEENVEELLEL 76 (90)
T ss_pred CeEEEECC----EEEehHHHHHhhcCHHHHHHHcCCCccCCCCEEEecCCCHHHHHHHHHeecCceeecCHHHHHHHHHH
Confidence 78999999 999999999999999999999998875 455688899999999999999999999999999999999
Q ss_pred cccceeecc
Q psy6508 437 SDHHTRVSI 445 (477)
Q Consensus 437 a~~~~~~~~ 445 (477)
|+++.+.++
T Consensus 77 a~~~~~~~l 85 (90)
T smart00225 77 ADYLQIPGL 85 (90)
T ss_pred HHHHCcHHH
Confidence 999887654
No 445
>KOG0195|consensus
Probab=99.48 E-value=3.7e-15 Score=137.17 Aligned_cols=168 Identities=19% Similarity=0.292 Sum_probs=135.4
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCC--CCCHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHE--KLSEFQC 80 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~l~~~~~ 80 (477)
+|..++.|+++....+....++|..|.-.|+-+.||||+.+++.|....++.++..|++.|+|...+.... ..+..++
T Consensus 212 qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqa 291 (448)
T KOG0195|consen 212 QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQA 291 (448)
T ss_pred cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchH
Confidence 46678889998888777777889999999999999999999999999999999999999999999998754 3778899
Q ss_pred HHHHHHHHHHHHHHHhCC-cE-EccCCCCceeeccC-cceeecccccceecccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 81 QQFVRQLVLALKFLRENN-VC-HFDLKPQNILIKNN-TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~g-iv-HrDlkp~NIll~~~-~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
.+++.+++.|+.|||+.. ++ ---|....++++++ ..|+.-.|.-.+-+..| +...+.|++||.+.+.
T Consensus 292 v~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~g---------r~y~pawmspealqrkp 362 (448)
T KOG0195|consen 292 VRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVG---------RAYSPAWMSPEALQRKP 362 (448)
T ss_pred HHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccc---------cccCcccCCHHHHhcCc
Confidence 999999999999999963 33 34688889999875 44444333333323333 3446789999998776
Q ss_pred -----CcccccCcceEEEEEE--eeeccccc
Q psy6508 157 -----TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 157 -----~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.++|+ ||++++++|+ .-.||+.-
T Consensus 363 ed~n~raadm-wsfaillwel~trevpfadl 392 (448)
T KOG0195|consen 363 EDLNIRAADM-WSFAILLWELNTREVPFADL 392 (448)
T ss_pred hhcchhhhhH-HHHHHHHHHhhccccccccC
Confidence 67899 9999999999 44788753
No 446
>KOG0603|consensus
Probab=99.47 E-value=4.2e-15 Score=151.56 Aligned_cols=169 Identities=22% Similarity=0.323 Sum_probs=142.7
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
+.|..+|+|++++.............|..++...+ ||+++++.-.++.+...++++++..||.|...+.+...+.+...
T Consensus 20 da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~ 99 (612)
T KOG0603|consen 20 DAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDV 99 (612)
T ss_pred cccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHH
Confidence 35677899998877654433335667889999996 99999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCc-ceeecccccceecccCCcccccCCeEEEeccccccccCCCC-Cc
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-TS 158 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~-~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-~~ 158 (477)
..+...++-+++++|+.|++|||+|++||+++.++ +++. |||.++..-. .....++..|++||+..+. .+
T Consensus 100 ~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~t--dfglske~v~------~~~~cgt~eymApEI~~gh~~a 171 (612)
T KOG0603|consen 100 AFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLT--DFGLSKEAVK------EKIACGTYEYRAPEIINGHLSA 171 (612)
T ss_pred HHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccC--CchhhhHhHh------hhhcccchhhhhhHhhhccCCc
Confidence 99999999999999999999999999999998865 6666 9998764321 1122567789999999955 88
Q ss_pred ccccCcceEEEEEE--eeecccc
Q psy6508 159 LEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 159 ~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
+|+ |++|++++|+ +..||.+
T Consensus 172 ~D~-ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 172 ADW-WSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ccc-hhhhhhHHHHhhCCCCCch
Confidence 899 9999999999 7788876
No 447
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.47 E-value=3.3e-14 Score=128.29 Aligned_cols=100 Identities=19% Similarity=0.152 Sum_probs=80.8
Q ss_pred CCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeE
Q psy6508 63 GDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTK 141 (477)
Q Consensus 63 ~sL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~ 141 (477)
|+|.+++..+ ..+++..+..|+.|++.||.|||+++ ||+||+++.+. ++.. ||.+...... ..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~-~~~~--fG~~~~~~~~-------~~ 64 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDG-LLKL--DGSVAFKTPE-------QS 64 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCcc-ceee--ccceEeeccc-------cC
Confidence 6899999874 46999999999999999999999998 99999997754 2222 8877654332 22
Q ss_pred EEeccccccccCCCC---CcccccCcceEEEEEE--eeecccc
Q psy6508 142 VICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 142 v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
.+++.|+|||+..+. .++|+ ||+|+++||+ +..||..
T Consensus 65 ~g~~~y~aPE~~~~~~~~~~~Di-wSlG~il~elltg~~p~~~ 106 (176)
T smart00750 65 RVDPYFMAPEVIQGQSYTEKADI-YSLGITLYEALDYELPYNE 106 (176)
T ss_pred CCcccccChHHhcCCCCcchhhH-HHHHHHHHHHHhCCCCccc
Confidence 567899999998766 77999 9999999999 5677753
No 448
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.41 E-value=1.2e-12 Score=124.18 Aligned_cols=119 Identities=18% Similarity=0.182 Sum_probs=88.1
Q ss_pred CcEEEEEEcccCCC-----------ChhHHHHHHHHHHHHHhcCCCCc--cceEEEEEeC-C---eEEEEEecCCC-CCH
Q psy6508 4 HTEVAIKCIDKTKV-----------SENRFDSIVNEIKALKLLHHQHI--VTMLDFLWDE-R---YVYIILEYCDG-GDL 65 (477)
Q Consensus 4 g~~vAiK~i~~~~~-----------~~~~~~~~~~E~~il~~l~HpnI--v~~~~~~~~~-~---~~~lv~e~~~g-~sL 65 (477)
+..++||.+..... +.....++.+|+.++..|+|++| ++.+++...+ . ..++|||+++| .+|
T Consensus 55 ~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L 134 (239)
T PRK01723 55 GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDL 134 (239)
T ss_pred CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCH
Confidence 67789998865321 11223568899999999988775 6777764432 2 23699999997 699
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceec
Q psy6508 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEK 128 (477)
Q Consensus 66 ~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~ 128 (477)
.+++.. ..+++.. +.|++.+|.+||++||+||||||.|||++.++ ++.++|||.+..
T Consensus 135 ~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~-~v~LIDfg~~~~ 191 (239)
T PRK01723 135 VALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDG-KFWLIDFDRGEL 191 (239)
T ss_pred HHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC-CEEEEECCCccc
Confidence 998865 3555543 57899999999999999999999999998643 344459987643
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.41 E-value=9.8e-13 Score=139.76 Aligned_cols=98 Identities=20% Similarity=0.303 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEE
Q psy6508 22 FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCH 101 (477)
Q Consensus 22 ~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 101 (477)
.+++.+|+.+++.++|++++....++......++||||++|++|.+++. ....++.|++.+|.+||++|++|
T Consensus 380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiH 451 (535)
T PRK09605 380 TERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVH 451 (535)
T ss_pred HHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCcc
Confidence 3568899999999999999988777777778899999999999999885 35678999999999999999999
Q ss_pred ccCCCCceeeccCcceeecccccceecc
Q psy6508 102 FDLKPQNILIKNNTLKLAGLKQGVSEKA 129 (477)
Q Consensus 102 rDlkp~NIll~~~~~rl~~~dfG~~~~~ 129 (477)
||+||+||+++++.+++ +|||++...
T Consensus 452 rDlkp~NILl~~~~~~l--iDFGla~~~ 477 (535)
T PRK09605 452 GDLTTSNFIVRDDRLYL--IDFGLGKYS 477 (535)
T ss_pred CCCChHHEEEECCcEEE--EeCcccccC
Confidence 99999999996665554 599988643
No 450
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.34 E-value=3.2e-12 Score=118.03 Aligned_cols=118 Identities=19% Similarity=0.170 Sum_probs=86.3
Q ss_pred CCCcEEEEEEcccCCCChh--------------------HHHHHHHHHHHHHhcCCC--CccceEEEEEeCCeEEEEEec
Q psy6508 2 EQHTEVAIKCIDKTKVSEN--------------------RFDSIVNEIKALKLLHHQ--HIVTMLDFLWDERYVYIILEY 59 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~--------------------~~~~~~~E~~il~~l~Hp--nIv~~~~~~~~~~~~~lv~e~ 59 (477)
++|+.||||+++....... ....+.+|..++..+.|+ .+++.++ ....+++|||
T Consensus 37 ~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~----~~~~~lv~e~ 112 (198)
T cd05144 37 PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPID----WNRHAVVMEY 112 (198)
T ss_pred CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceee----cCCceEEEEE
Confidence 4689999998765431100 112367899999999877 4555554 2456899999
Q ss_pred CCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceeccc
Q psy6508 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAK 130 (477)
Q Consensus 60 ~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~ 130 (477)
++|++|...... .....++.+++.++.++|+.|++||||||+||+++.+. ++..+|||.+...+
T Consensus 113 ~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~-~~~liDfg~~~~~~ 176 (198)
T cd05144 113 IDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE-KIYIIDWPQMVSTD 176 (198)
T ss_pred eCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC-cEEEEECCccccCC
Confidence 999998775431 34567889999999999999999999999999997532 44445999875433
No 451
>KOG1240|consensus
Probab=99.33 E-value=8e-14 Score=149.28 Aligned_cols=237 Identities=19% Similarity=0.222 Sum_probs=153.9
Q ss_pred EEEEEEcccCCC--ChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHHH
Q psy6508 6 EVAIKCIDKTKV--SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQF 83 (477)
Q Consensus 6 ~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~i 83 (477)
.|+||++-+... +-+...+-.+|++ ...+++||.+.+..+.+.+...|||-+|.. .+|.+.+..++-+..-+.+.|
T Consensus 48 ~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvk-hnLyDRlSTRPFL~~iEKkWi 125 (1431)
T KOG1240|consen 48 LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVK-HNLYDRLSTRPFLVLIEKKWI 125 (1431)
T ss_pred eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHh-hhhhhhhccchHHHHHHHHHH
Confidence 499999866542 3234444555666 566699999999888777888899999997 899999988766788888999
Q ss_pred HHHHHHHHHHHHhCCcEEccCCCCceeecc-Ccceeecccccceec-----ccCCcccccCCeEEEeccccccccCCCC-
Q psy6508 84 VRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEK-----AKGSAYIEQGNTKVICSVFEPREIPSSK- 156 (477)
Q Consensus 84 ~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~-----~~gs~~~~~g~t~v~~~~y~ppE~~~~~- 156 (477)
+.|++.||..+|..||+|||||.+||||+. |.+-+. ||.-.+. .+.+.+.-.-.|..--..|.|||.+...
T Consensus 126 aFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~Lt--DFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~ 203 (1431)
T KOG1240|consen 126 AFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLT--DFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSAL 203 (1431)
T ss_pred HHHHHHHHHHHHHcCccccccccceEEEeeechhhhh--cccccCCccCCCCCcccceEEEecCCceeeecChHhhhccc
Confidence 999999999999999999999999999975 655554 7765432 1122221112233333469999976541
Q ss_pred -------------CcccccCcceEEEEEE---eeeccccccccCCC---CCcchHHHHHH----HHHHhhhhhhcccCCC
Q psy6508 157 -------------TSLEYQRSKGELYVEF---KFAPFASQIRTGWL---RDSEEKELGNH----LKRALEPAVCRHEFSN 213 (477)
Q Consensus 157 -------------~~~Di~~s~G~il~e~---~~~Pf~~~~r~~~~---~~~~~~~l~~~----i~~~l~~~i~~~~~Pr 213 (477)
++-|| +|+||++.|+ |.+||.-..--... .+..+..++.+ ++..+...|.+++..|
T Consensus 204 ~~~~~~q~~~~L~paMDI-FS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~R 282 (1431)
T KOG1240|consen 204 GKTSVGQDAPLLTPAMDI-FSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKR 282 (1431)
T ss_pred cccccCCcccccChhhhh-hhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhc
Confidence 56799 9999999999 67888643221111 23333333333 3334444444444444
Q ss_pred CcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCC
Q psy6508 214 FQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMY 249 (477)
Q Consensus 214 ~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~ 249 (477)
...+-++ -+.-|-..+...-.-.--..+.=.+|.
T Consensus 283 lSAedyL--~~yrG~~FP~yFy~FL~~Y~~~~~~~~ 316 (1431)
T KOG1240|consen 283 LSAEDYL--QKYRGLVFPEYFYSFLYDYLDRFVPLT 316 (1431)
T ss_pred cCHHHHH--HhhhccccHHHHHHHHHHHHHhcCCcc
Confidence 4433221 122566666665554444444444444
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.28 E-value=1.6e-11 Score=112.02 Aligned_cols=122 Identities=16% Similarity=0.216 Sum_probs=83.0
Q ss_pred CCCcEEEEEEcccCCCChhHHHH----------------------HHHHHHHHHhcCCC--CccceEEEEEeCCeEEEEE
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDS----------------------IVNEIKALKLLHHQ--HIVTMLDFLWDERYVYIIL 57 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~----------------------~~~E~~il~~l~Hp--nIv~~~~~~~~~~~~~lv~ 57 (477)
++|+.||||+++........... ...|...+.++.+. .+++.++. ...+++|
T Consensus 19 ~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~----~~~~lv~ 94 (187)
T cd05119 19 GDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPIDL----NRHVLVM 94 (187)
T ss_pred CCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCceEec----CCCEEEE
Confidence 36889999998765332211111 14677777777543 35555553 2358999
Q ss_pred ecCCCCCHHH-HHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceecccC
Q psy6508 58 EYCDGGDLCS-FIRSHEKLSEFQCQQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKG 131 (477)
Q Consensus 58 e~~~g~sL~~-~l~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~g 131 (477)
||++|+++.. .+... .. ...+..++.+++.++.++|. +||+||||||+||+++++.++ .+|||.+...++
T Consensus 95 e~~~g~~~~~~~l~~~-~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~~~~~~--liDfg~a~~~~~ 166 (187)
T cd05119 95 EFIGGDGIPAPRLKDV-RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVDDGKVY--IIDVPQAVEIDH 166 (187)
T ss_pred EEeCCCCccChhhhhh-hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEECCcEE--EEECcccccccC
Confidence 9999844322 12111 11 16678999999999999999 999999999999999954544 459998865554
No 453
>KOG1614|consensus
Probab=99.25 E-value=3.9e-10 Score=101.86 Aligned_cols=209 Identities=18% Similarity=0.250 Sum_probs=157.9
Q ss_pred cceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccccccCCCCCcchHHH
Q psy6508 115 TLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKEL 194 (477)
Q Consensus 115 ~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l 194 (477)
+.|-..+.||- ..|+.....|+|++++.+-..--. +..|- .--|.+.......|.++..-.+........++
T Consensus 31 efR~lei~fGk---e~gs~~vt~G~Tkvm~~vt~~ia~----Py~dR-P~eG~~~I~telsPmA~~sfE~Gr~~~~~v~l 102 (291)
T KOG1614|consen 31 EFRDLEIEFGK---EYGSVLVTMGNTKVMARVTAQIAQ----PYIDR-PHEGSFSIFTELSPMASPSFEPGRKGESEVEL 102 (291)
T ss_pred hhhceEEEecc---ccccEEEEecCeeEEEEeehhhcC----cccCC-CCCCeeeeeeccccccccccCCCCccchHHHH
Confidence 45666667774 468888999999999986432111 11232 34466666555566665444444444667888
Q ss_pred HHHHHHHhhhh-------hh-cccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCC---------------------
Q psy6508 195 GNHLKRALEPA-------VC-RHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAA--------------------- 245 (477)
Q Consensus 195 ~~~i~~~l~~~-------i~-~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dag--------------------- 245 (477)
.+++.+.+... +| .-.-.-|.|.+.+++|..||+...+|..|+..||..-+
T Consensus 103 ~Rliek~~R~S~aiD~EsLCI~aG~kvW~IRiDlhiLd~DGnlvDaA~iAviaaL~hFrrPdvTv~g~ev~ihp~eEr~P 182 (291)
T KOG1614|consen 103 SRLIEKALRRSKAIDTESLCIRAGEKVWLIRIDLHILDHDGNLVDAACIAVIAALMHFRRPDVTVGGEEVIIHPVEEREP 182 (291)
T ss_pred HHHHHHHHHhccccchHHHHhhhCCeEEEEEEEEEEEcCCCCeehhHHHHHHHHHHhcCCCCcccccceeEecChhccCC
Confidence 89998887644 22 33344688999999999999999999999999999988
Q ss_pred --CCCCceEEEEEEEeeC--CeEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEeee--cHHHHHHHH
Q psy6508 246 --IPMYDLVTSSTLALRG--GLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTI--QQERLADHI 319 (477)
Q Consensus 246 --i~m~~~v~a~s~~~~~--~~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~~--~~~~~~~~l 319 (477)
..|..+....|.+..+ +.+++|||..|+... .|.++++ +++.++|+++++.|.. ...++.++.
T Consensus 183 vPL~I~HmPIC~tf~ffnkG~ivviDpt~~Ee~~~----------dGs~vVt-~Nk~rEVc~i~k~G~~~~~~~~i~~C~ 251 (291)
T KOG1614|consen 183 VPLSIHHMPICFTFGFFNKGEIVVIDPTEKEEAVM----------DGSMVVT-MNKNREVCAIQKSGGEILDESVIERCY 251 (291)
T ss_pred cceeeeeccceEEEEEecCceEEEeCCcHHHHhcc----------CceEEEE-EcCCccEEEEecCCCccccHHHHHHHH
Confidence 4488889999999874 567889999999964 7888886 6888999999999874 688899999
Q ss_pred HHHHhcccchhhHHHHhHhhhccc
Q psy6508 320 EQLIGCCESLCTDRVQKLVSDHVT 343 (477)
Q Consensus 320 ~~~~~~~~~i~~~~i~~~l~~~~~ 343 (477)
..|...+.++-.. +.+.+.+...
T Consensus 252 k~A~~~a~~vt~i-i~e~l~~d~~ 274 (291)
T KOG1614|consen 252 KLAKDRAVEVTGI-ILEALEEDQR 274 (291)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999998 8888876543
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.25 E-value=2.8e-11 Score=105.35 Aligned_cols=112 Identities=22% Similarity=0.284 Sum_probs=91.1
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCC--CCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH--QHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H--pnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
++.+++|....... ...+.+|+.+++.++| +++++++.+....+..+++|||++|+++..+ +.....
T Consensus 21 ~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-------~~~~~~ 89 (155)
T cd05120 21 DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-------SEEEKE 89 (155)
T ss_pred CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC-------CHHHHH
Confidence 46899999865532 3568899999999976 5999999988888889999999998777654 556677
Q ss_pred HHHHHHHHHHHHHHhC---CcEEccCCCCceeecc-Ccceeecccccceec
Q psy6508 82 QFVRQLVLALKFLREN---NVCHFDLKPQNILIKN-NTLKLAGLKQGVSEK 128 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~-~~~rl~~~dfG~~~~ 128 (477)
.++.+++.++.++|.. +++|+|++|.||++++ +.++ .+|||.+..
T Consensus 90 ~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~--l~Df~~~~~ 138 (155)
T cd05120 90 DIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILG--IIDWEYAGY 138 (155)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEE--EEecccccC
Confidence 8899999999999984 7999999999999987 4444 458887643
No 455
>KOG1166|consensus
Probab=99.17 E-value=7.1e-12 Score=136.54 Aligned_cols=193 Identities=17% Similarity=0.192 Sum_probs=129.4
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC---CCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH---HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQ 79 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~ 79 (477)
+|+.||+|+=+....-+ |.-=.+++.+|+ -|-|..+..+....+.-++|+||.+.|+|.+++...+.+++..
T Consensus 721 ~~~~~alK~e~P~~~WE-----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~l 795 (974)
T KOG1166|consen 721 NGKLVALKVEKPPNPWE-----FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYL 795 (974)
T ss_pred CCcEEEEEeecCCCcee-----eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhccCCCCCchh
Confidence 48999999865543221 111123333443 2455666666666667789999999999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEccCCCCceeec------cCcceeecccccceecccCCcccccCC---eEEEecccccc
Q psy6508 80 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIK------NNTLKLAGLKQGVSEKAKGSAYIEQGN---TKVICSVFEPR 150 (477)
Q Consensus 80 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~------~~~~rl~~~dfG~~~~~~gs~~~~~g~---t~v~~~~y~pp 150 (477)
++.+..|++..++.||..||||+||||+|+||. ++..-+.++|||.+.... .+..|. ....|-.+-.+
T Consensus 796 v~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~---lfp~~~~F~~~~~td~f~C~ 872 (974)
T KOG1166|consen 796 VMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK---LFPDGTKFKAVWHTDLFDCI 872 (974)
T ss_pred hhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeee---EcCCCcEEeeeeccccchhH
Confidence 999999999999999999999999999999994 233444455999764322 222332 24455568889
Q ss_pred ccCCCC---CcccccCcceEEEEEEeeeccccccccCCCCCcchHHHHHHHHHHhhhhh
Q psy6508 151 EIPSSK---TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKELGNHLKRALEPAV 206 (477)
Q Consensus 151 E~~~~~---~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~l~~~i~~~l~~~i 206 (477)
|+..|+ -.+|+ +.++.+++-|.+.-|-. ......+.....+.+..++-+|..+
T Consensus 873 EM~~grpWtYq~Dy-fGlAa~~h~mLFG~y~q--~~~g~~~~~~~~~~Ry~~~~~W~~~ 928 (974)
T KOG1166|consen 873 EMREGRPWTYQIDY-FGLAATVHVMLFGKYME--VKNGSSWMVKTNFPRYWKRDMWNKF 928 (974)
T ss_pred HHhcCCCCchhhhh-HHHHHHHHHHHHHHHHH--hcCCcceeccccchhhhhHHHHHHH
Confidence 998888 44687 88888888776554443 1111112222225555555555443
No 456
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.15 E-value=2.4e-10 Score=104.31 Aligned_cols=95 Identities=17% Similarity=0.267 Sum_probs=72.9
Q ss_pred HHHHHHHhcC--CCCccceEEEEEeCCeEEEEEecCCCCCHHH-HHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCcEEc
Q psy6508 27 NEIKALKLLH--HQHIVTMLDFLWDERYVYIILEYCDGGDLCS-FIRSHEKLSEFQCQQFVRQLVLALKFL-RENNVCHF 102 (477)
Q Consensus 27 ~E~~il~~l~--HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~-~l~~~~~l~~~~~~~i~~qi~~aL~~L-H~~givHr 102 (477)
+|+..|+++. .-++++.+++ ..-+|||||+.+..+.. .++. ..++......+..+++.+|..| |+.|++|+
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-~~~~~~~~~~i~~~i~~~l~~l~H~~glVHG 149 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-AKLNDEEMKNAYYQVLSMMKQLYKECNLVHA 149 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-cccCHHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 8999999994 4677888865 34689999997644422 2322 2456667778899999999998 89999999
Q ss_pred cCCCCceeeccCcceeecccccceec
Q psy6508 103 DLKPQNILIKNNTLKLAGLKQGVSEK 128 (477)
Q Consensus 103 Dlkp~NIll~~~~~rl~~~dfG~~~~ 128 (477)
||+|.||+++++.+.+ +|||.+..
T Consensus 150 DLs~~NIL~~~~~v~i--IDF~qav~ 173 (197)
T cd05146 150 DLSEYNMLWHDGKVWF--IDVSQSVE 173 (197)
T ss_pred CCCHHHEEEECCcEEE--EECCCcee
Confidence 9999999998776555 58887643
No 457
>KOG1023|consensus
Probab=99.11 E-value=6.7e-12 Score=128.08 Aligned_cols=146 Identities=22% Similarity=0.309 Sum_probs=115.2
Q ss_pred HHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCc-EEccCCCCce
Q psy6508 32 LKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNV-CHFDLKPQNI 109 (477)
Q Consensus 32 l~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi-vHrDlkp~NI 109 (477)
|+.+.|.|+.++++.+.++...++|.+||..|+|.+.+... ..+++.....+.++++.||.|+|+..| .|+.+++.|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 46789999999999999999999999999999999999873 468888999999999999999998765 9999999999
Q ss_pred eeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC----------CcccccCcceEEEEEE--eeecc
Q psy6508 110 LIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK----------TSLEYQRSKGELYVEF--KFAPF 177 (477)
Q Consensus 110 ll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~----------~~~Di~~s~G~il~e~--~~~Pf 177 (477)
+++... .+.+.|||+.................-...|.|||.+... .+.|+ ||+|++++|+ ...||
T Consensus 81 lvd~~w-~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi-Ys~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 81 LVDSRW-VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDI-YSFGIIMYEILFRSGPF 158 (484)
T ss_pred eeeeeE-EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCe-ehHHHHHHHHHhccCcc
Confidence 998863 3344588886544322211222222234469999988763 45799 9999999999 44677
Q ss_pred cc
Q psy6508 178 AS 179 (477)
Q Consensus 178 ~~ 179 (477)
..
T Consensus 159 ~~ 160 (484)
T KOG1023|consen 159 DL 160 (484)
T ss_pred cc
Confidence 64
No 458
>KOG1067|consensus
Probab=99.11 E-value=5.3e-10 Score=111.84 Aligned_cols=206 Identities=19% Similarity=0.292 Sum_probs=160.3
Q ss_pred CcceeecccccceecccCCcccccCCeEEEecc-ccccccCCCC---CcccccCcceEEEEEEeeeccccccccCC-CCC
Q psy6508 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV-FEPREIPSSK---TSLEYQRSKGELYVEFKFAPFASQIRTGW-LRD 188 (477)
Q Consensus 114 ~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~-y~ppE~~~~~---~~~Di~~s~G~il~e~~~~Pf~~~~r~~~-~~~ 188 (477)
+++|.+.+..+..+...||+.+..|.|++.|.+ ++++|....- ...| +.+..++.+.|+||+...-... ...
T Consensus 366 delR~I~ce~~m~~~lHGSaLFqRGqTQvlctVtl~s~e~a~klD~l~~~~---~~~~FmLhY~FPPyat~Evgkig~~n 442 (760)
T KOG1067|consen 366 DELRNISCEVDMLKTLHGSALFQRGQTQVLCTVTLDSLESAQKLDSLIGPD---NGINFMLHYEFPPYATNEVGKIGGLN 442 (760)
T ss_pred hhhcccceecCccccccchhhhhcCceeEEEEEEcCCHHHhhhhhhhccCc---cCceEEEEeccCCccccccccccCCc
Confidence 468889999999999999999999999999987 7888765433 1112 2336677778999997543322 233
Q ss_pred cchHHHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEEEEEEEeeCC------
Q psy6508 189 SEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLALRGG------ 262 (477)
Q Consensus 189 ~~~~~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~------ 262 (477)
+++..-...-++++.|.+. +.|| ..|.+..+||+.+|+.-.|++.+.|+||.|||||.+..|+++++++.-+
T Consensus 443 RRE~GhgaLAEkaL~~vlP-~dfP-ftIRv~SeVleSnGSsSMASvCGGslALmDaGvPv~a~vAGvaiGlvt~td~e~g 520 (760)
T KOG1067|consen 443 RRELGHGALAEKALLPVLP-EDFP-FTIRVTSEVLESNGSSSMASVCGGSLALMDAGVPVSAHVAGVAIGLVTKTDPEKG 520 (760)
T ss_pred ccccCchhHhhhhhhccCc-ccCc-eEEEEeeeeeecCCcchHHhhhcchhhhhhcCCccccccceeEEEeEeccCcccC
Confidence 4444445666778887775 5666 7899999999999999999999999999999999999999999998511
Q ss_pred -----eEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEeeecHHHHHHHHHHHHhcccchhhHHHHhH
Q psy6508 263 -----LTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKL 337 (477)
Q Consensus 263 -----~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~~~~~~~~~~l~~~~~~~~~i~~~~i~~~ 337 (477)
.++.|-..-|.. .|.|.|-+....+.|+.+ .++.+-..+++..|.++-.+|... |.+.
T Consensus 521 ~i~dyriltDIlGiEd~------------~GDMDFKiAGt~dGvTA~----gi~l~Iv~eal~~a~~ar~~Il~~-m~k~ 583 (760)
T KOG1067|consen 521 EIEDYRILTDILGIEDY------------NGDMDFKIAGTNDGVTAL----GIPLKIVMEALQKAREARLQILDI-MEKN 583 (760)
T ss_pred Ccccceeehhhcchhhh------------cCCcceeeccccCcceec----CCcHHHHHHHHHhhhHHHHHHHHH-HHhh
Confidence 255666666644 577888777888888887 788899999999999999999988 8776
Q ss_pred hhhc
Q psy6508 338 VSDH 341 (477)
Q Consensus 338 l~~~ 341 (477)
+...
T Consensus 584 i~~P 587 (760)
T KOG1067|consen 584 INSP 587 (760)
T ss_pred cCCc
Confidence 6544
No 459
>COG1185 Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis]
Probab=99.06 E-value=5.7e-10 Score=115.42 Aligned_cols=224 Identities=20% Similarity=0.305 Sum_probs=169.3
Q ss_pred ccCCCCceeecc---CcceeecccccceecccCCcccccCCeEEEecc-ccccccCCCCCcccccCc--ceEEEEEEeee
Q psy6508 102 FDLKPQNILIKN---NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSV-FEPREIPSSKTSLEYQRS--KGELYVEFKFA 175 (477)
Q Consensus 102 rDlkp~NIll~~---~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~-y~ppE~~~~~~~~Di~~s--~G~il~e~~~~ 175 (477)
+-|--.++-++. +++|++.+..|+..+..||+.+..|.|.....+ +++|....-- |..-. .-..+....++
T Consensus 305 ~~Il~~~vR~DGR~~~~VRpi~~ev~~lpr~HGS~LFtRGeTQal~v~TLG~~~d~Qvi---d~l~~e~~krfm~hYNFP 381 (692)
T COG1185 305 RLILEGKVRIDGRFGDEVRPIGIEVGVLPRTHGSALFTRGETQALVVVTLGTPRDAQVI---DILEGEYKKRFLLHYNFP 381 (692)
T ss_pred HHHhcCCcccCCCCcceeeeeeEEecCCCCccchhhhccCCCcceEEEEcCCcchhhhh---hhccchhhhheeeeccCC
Confidence 334444555543 589999999999999999999999998765554 6766432211 11011 12344555889
Q ss_pred cccccccc-CCCCCcchHHHHHHHHHHhhhhhh-cccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCCceEE
Q psy6508 176 PFASQIRT-GWLRDSEEKELGNHLKRALEPAVC-RHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVT 253 (477)
Q Consensus 176 Pf~~~~r~-~~~~~~~~~~l~~~i~~~l~~~i~-~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~~~v~ 253 (477)
||+...-. -..+.+++.--...-++++.+.+. .+.|| ..|.+..++++.+|+.-.+.+.+.+|||+|||+|++..|+
T Consensus 382 p~SvGE~g~~g~p~RREiGHG~LA~Ral~~vlp~~e~fp-ytiRvVsEi~eSNGSsSmaSVCg~sLaLmdAGVPIk~pVA 460 (692)
T COG1185 382 PFSVGETGRMGSPGRREIGHGALAERALAPVLPSEEEFP-YTIRVVSEILESNGSSSMASVCGGSLALMDAGVPIKAPVA 460 (692)
T ss_pred CCCccccCCCCCCCcccccCchhhHHHHhhhCCchhcCC-ceeeeeehhhcccCcccchhhhhhHHHHHhCCCccccccc
Confidence 99954433 334556666667777888888886 45565 7788999999999999999999999999999999999999
Q ss_pred EEEEEee-CC---eEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEE---eeecHHHHHHHHHHHHhcc
Q psy6508 254 SSTLALR-GG---LTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLV---GTIQQERLADHIEQLIGCC 326 (477)
Q Consensus 254 a~s~~~~-~~---~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~---g~~~~~~~~~~l~~~~~~~ 326 (477)
++..|++ +| .++-|-...|. ..+.|-|-+....+-|+.+|++ ..++.+-+..++..|+.+.
T Consensus 461 GIAMGLI~eg~~~~vLsDI~G~ED------------hlGDMDFKVAGT~~GiTAlQMDiKi~Git~eim~~AL~QAk~aR 528 (692)
T COG1185 461 GIAMGLIKEGDKYAVLSDILGDED------------HLGDMDFKVAGTDDGITALQMDIKIKGITKEIMKKALEQAKGAR 528 (692)
T ss_pred chhccceecCCceEeecccccccc------------ccCCceeEEecCCCcceeeeeeeeecCCCHHHHHHHHHHHHHHH
Confidence 9999987 22 25556666663 3678888887888889999998 4577999999999999999
Q ss_pred cchhhHHHHhHhhhcc
Q psy6508 327 ESLCTDRVQKLVSDHV 342 (477)
Q Consensus 327 ~~i~~~~i~~~l~~~~ 342 (477)
.++... |.+++..+-
T Consensus 529 lhIL~~-M~~ai~~pr 543 (692)
T COG1185 529 LHILIV-MNEAISEPR 543 (692)
T ss_pred HHHHHH-HHHHHhhhh
Confidence 999999 998886664
No 460
>KOG0590|consensus
Probab=99.05 E-value=3.5e-11 Score=128.08 Aligned_cols=172 Identities=26% Similarity=0.303 Sum_probs=133.1
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHHH-HhCC-CCCHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSFI-RSHE-KLSEFQC 80 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l-~~~~-~l~~~~~ 80 (477)
...+|.|.+...............|..+-+.+. |+|++++++.....+..++.+++..|+++...+ .... ..+....
T Consensus 46 ~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~ 125 (601)
T KOG0590|consen 46 ESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSA 125 (601)
T ss_pred cceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcch
Confidence 445666766555433444455667888888886 999999999999999999999999999999988 5544 5778888
Q ss_pred HHHHHHHHHHHHHHH-hCCcEEccCCCCceeeccCcceeecccccceeccc---CCcccccCCeEEE-eccccccccCCC
Q psy6508 81 QQFVRQLVLALKFLR-ENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAK---GSAYIEQGNTKVI-CSVFEPREIPSS 155 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH-~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~---gs~~~~~g~t~v~-~~~y~ppE~~~~ 155 (477)
..++.|+..++.|+| ..++.|||+||+|.+++...-.+...|||++.... |... .-....+ ++.|++||...+
T Consensus 126 ~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~--~~~~~~g~s~~y~a~E~~~~ 203 (601)
T KOG0590|consen 126 SRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAER--SLKDRCGSSPPYGAPEHLSG 203 (601)
T ss_pred hhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcce--eeecccCCCCCCCCcccccc
Confidence 899999999999999 99999999999999997654255556999886432 2221 1123445 788999999988
Q ss_pred ----CCcccccCcceEEEEEE--eeeccc
Q psy6508 156 ----KTSLEYQRSKGELYVEF--KFAPFA 178 (477)
Q Consensus 156 ----~~~~Di~~s~G~il~e~--~~~Pf~ 178 (477)
....|+ |+.|+++.-+ +-.|+.
T Consensus 204 ~~~~~~~~d~-~S~g~~l~~~~~g~~p~~ 231 (601)
T KOG0590|consen 204 KAYRGPSVDV-WSLGIVLSAMLTGELPWD 231 (601)
T ss_pred hhhcCCCccc-ccccccccccccCCCCcc
Confidence 378899 9999999888 334444
No 461
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.04 E-value=6.6e-11 Score=113.73 Aligned_cols=171 Identities=19% Similarity=0.248 Sum_probs=104.6
Q ss_pred CCCcEEEEEEcccCCC-ChhHHHHHHHHHHHHHhcCC----------CCccceEEEEE---------eC---C-----eE
Q psy6508 2 EQHTEVAIKCIDKTKV-SENRFDSIVNEIKALKLLHH----------QHIVTMLDFLW---------DE---R-----YV 53 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~H----------pnIv~~~~~~~---------~~---~-----~~ 53 (477)
++|+++|+|+...... ....++++.+|......+.+ -.++.-++... .. + ..
T Consensus 35 ~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~ 114 (288)
T PF14531_consen 35 ETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNR 114 (288)
T ss_dssp TTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEEEECETTEEEEEESE
T ss_pred cCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCcceecCCCCccceeehh
Confidence 5789999998766553 23467788888766655432 12222223221 11 1 24
Q ss_pred EEEEecCCCCCHHHHHHh---CCC----CCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccce
Q psy6508 54 YIILEYCDGGDLCSFIRS---HEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVS 126 (477)
Q Consensus 54 ~lv~e~~~g~sL~~~l~~---~~~----l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~ 126 (477)
+++|+-+. ++|.+++.. ... +.......+..|+++.+++||+.|++|+||+|+|++++.++ .+.+.||+..
T Consensus 115 ~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G-~v~Lg~F~~~ 192 (288)
T PF14531_consen 115 FLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDG-GVFLGDFSSL 192 (288)
T ss_dssp EEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS--EEE--GGGE
T ss_pred hhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCC-CEEEcChHHH
Confidence 78888886 899888642 111 22333356668999999999999999999999999998764 4445688876
Q ss_pred ecccCCcccccCCeEEEeccccccccCCC------C-----CcccccCcceEEEEEE--eeeccccc
Q psy6508 127 EKAKGSAYIEQGNTKVICSVFEPREIPSS------K-----TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 127 ~~~~gs~~~~~g~t~v~~~~y~ppE~~~~------~-----~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.... ..+.. ...+..|.|||.... . .+.|. |.+|+++|.+ +..||...
T Consensus 193 ~r~g-~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~Da-W~LG~~ly~lWC~~lPf~~~ 253 (288)
T PF14531_consen 193 VRAG-TRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDA-WQLGITLYSLWCGRLPFGLS 253 (288)
T ss_dssp EETT-EEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHH-HHHHHHHHHHHHSS-STCCC
T ss_pred eecC-ceeec----cCCCcccCChhhhhhhcccCcccceeeeccCH-HHHHHHHHHHHHccCCCCCC
Confidence 5433 22211 122356999986532 1 55688 9999999999 77888743
No 462
>KOG1033|consensus
Probab=99.04 E-value=8.1e-12 Score=125.50 Aligned_cols=117 Identities=19% Similarity=0.316 Sum_probs=96.5
Q ss_pred eEEEEEecCCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceec
Q psy6508 52 YVYIILEYCDGGDLCSFIRSHE---KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEK 128 (477)
Q Consensus 52 ~~~lv~e~~~g~sL~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~ 128 (477)
++||.|++|...+|.+|+...+ ..+......|+.|++.|++| +|.+|||+||.||+...+. .+.+.|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~-q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDD-QLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccch-hhhhhhhhheee
Confidence 5899999999999999997543 46788899999999999999 9999999999999996654 333459998876
Q ss_pred ccCCc----ccccCCeEEEeccccccccCCCC---CcccccCcceEEEEEEe
Q psy6508 129 AKGSA----YIEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEFK 173 (477)
Q Consensus 129 ~~gs~----~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~~ 173 (477)
.++.. ....-...+++.+||+||.+.++ .++|| |++|.+++|+.
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdI-yaLGlil~EL~ 456 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDI-YALGLILAELL 456 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcch-hhHHHHHHHHH
Confidence 55433 11223467999999999999987 88999 99999999984
No 463
>KOG1243|consensus
Probab=99.01 E-value=7.1e-10 Score=114.72 Aligned_cols=160 Identities=19% Similarity=0.237 Sum_probs=122.1
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.++.+|.|...+.... ...+...+-++-|+.++||||+++++.++.++..|||+|.+. .|..++++. ....+.
T Consensus 35 ~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l---~~~~v~ 107 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL---GKEEVC 107 (690)
T ss_pred ccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh---HHHHHH
Confidence 3678899998877653 445567788999999999999999999999999999999985 899999763 477788
Q ss_pred HHHHHHHHHHHHHH-hCCcEEccCCCCceeecc-CcceeecccccceecccCCcccccCCeEEEeccccccccCCCC-Cc
Q psy6508 82 QFVRQLVLALKFLR-ENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK-TS 158 (477)
Q Consensus 82 ~i~~qi~~aL~~LH-~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~-~~ 158 (477)
..+.||+.||.||| +.+++|++|.-.-|+++. ++.++. +|-.+..+.|... ........-.|..|+..... ..
T Consensus 108 ~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLg--gle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~~s 183 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLG--GLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSEWS 183 (690)
T ss_pred HHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEe--eeEEEeccccCCc--ccccchhhhcccChhhcCccccc
Confidence 88999999999997 578999999999999976 566666 5555555554332 11122222345556543332 45
Q ss_pred ccccCcceEEEEEEe
Q psy6508 159 LEYQRSKGELYVEFK 173 (477)
Q Consensus 159 ~Di~~s~G~il~e~~ 173 (477)
.|. |.+|++++|+.
T Consensus 184 ~D~-~~Lg~li~el~ 197 (690)
T KOG1243|consen 184 IDS-WGLGCLIEELF 197 (690)
T ss_pred hhh-hhHHHHHHHHh
Confidence 688 99999999983
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.94 E-value=2e-09 Score=96.36 Aligned_cols=110 Identities=19% Similarity=0.224 Sum_probs=78.7
Q ss_pred CCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCC-ccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy6508 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQH-IVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ 81 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~ 81 (477)
.++.|++|+...... ....+.+|+.+++.+.+.+ +++++... ....++||||++|.++.+. . ....
T Consensus 20 ~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~~-----~---~~~~ 86 (170)
T cd05151 20 ANKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLTE-----D---FSDP 86 (170)
T ss_pred CCeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccccc-----c---ccCH
Confidence 367899998754421 1224578999999986544 45666543 3345799999999887653 0 1123
Q ss_pred HHHHHHHHHHHHHHhCCc-----EEccCCCCceeeccCcceeeccccccee
Q psy6508 82 QFVRQLVLALKFLRENNV-----CHFDLKPQNILIKNNTLKLAGLKQGVSE 127 (477)
Q Consensus 82 ~i~~qi~~aL~~LH~~gi-----vHrDlkp~NIll~~~~~rl~~~dfG~~~ 127 (477)
.++.+++.+|..||+.++ +|+|++|.||+++++.++ .+|||.+.
T Consensus 87 ~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~~~~~--liDf~~a~ 135 (170)
T cd05151 87 ENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDDGRLW--LIDWEYAG 135 (170)
T ss_pred HHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEECCeEE--EEeccccc
Confidence 456899999999999885 999999999999966555 45888764
No 465
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.94 E-value=1.4e-08 Score=97.71 Aligned_cols=124 Identities=17% Similarity=0.139 Sum_probs=90.8
Q ss_pred CCcEEEEEEcccCCCChhHH----------HHHHHHHHHHHhcCCC--CccceEEEEEe-----CCeEEEEEecCCCC-C
Q psy6508 3 QHTEVAIKCIDKTKVSENRF----------DSIVNEIKALKLLHHQ--HIVTMLDFLWD-----ERYVYIILEYCDGG-D 64 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~~~----------~~~~~E~~il~~l~Hp--nIv~~~~~~~~-----~~~~~lv~e~~~g~-s 64 (477)
+|+.|.||......... .. ..+.+|...+.+|..- ..++.+.+++. ...-++|||++++. +
T Consensus 44 ~g~~~~vKr~~~~~~~~-~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~s 122 (268)
T PRK15123 44 AGKSYFLKWHRGTGWGE-IFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTIS 122 (268)
T ss_pred CCEEEEEEEecCCcHHH-HhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCcc
Confidence 46789999764332111 11 1377999999988433 34455555543 23578999999875 8
Q ss_pred HHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc------Ccceeeccccccee
Q psy6508 65 LCSFIRS--HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN------NTLKLAGLKQGVSE 127 (477)
Q Consensus 65 L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~------~~~rl~~~dfG~~~ 127 (477)
|.+++.. ....+......++.+++..+.-||.+||+|+|++|.|||++. +..++..+||+.+.
T Consensus 123 L~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 123 LEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 9999864 234566778899999999999999999999999999999974 35677778998763
No 466
>KOG0606|consensus
Probab=98.92 E-value=5.3e-11 Score=127.88 Aligned_cols=107 Identities=26% Similarity=0.394 Sum_probs=78.3
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc-CcceeecccccceecccCC---c----c
Q psy6508 63 GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLAGLKQGVSEKAKGS---A----Y 134 (477)
Q Consensus 63 ~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~rl~~~dfG~~~~~~gs---~----~ 134 (477)
|+-...++..+.++-.. +.+++|+|+.||+|||+||+|.+|+. +.+++. |||+...---+ . +
T Consensus 136 gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlT--DfgLsk~GLms~atnl~eg~ 205 (1205)
T KOG0606|consen 136 GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLT--DFGLSKKGLMSLATNLKEGH 205 (1205)
T ss_pred chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeeccccccc--chhhhhhhhhhccchhhhcc
Confidence 55566666656666443 77899999999999999999999986 555665 88876421100 0 0
Q ss_pred -----cccC-CeEEEeccccccccCCCC---CcccccCcceEEEEEE--eeeccccc
Q psy6508 135 -----IEQG-NTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--KFAPFASQ 180 (477)
Q Consensus 135 -----~~~g-~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~~~Pf~~~ 180 (477)
.+.. ....+|+.|.|||+...+ ..+|+ |++|+++||+ +..||.+.
T Consensus 206 I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdw-wamGiIlyeFLVgcvpffGd 261 (1205)
T KOG0606|consen 206 IEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDW-WAMGIILYEFLVGCVPFFGD 261 (1205)
T ss_pred hHHHHHHhhhccccCCccccChhhhhhhccCCCccH-HHHHHHHHHHheeeeeccCC
Confidence 0111 234788999999998776 78999 9999999998 66888754
No 467
>PF03725 RNase_PH_C: 3' exoribonuclease family, domain 2 This Prosite family only includes Ribonuclease PH; InterPro: IPR015847 The PH (phosphorolytic) domain is responsible for 3'-5' exoribonuclease activity, although in some proteins this domain has lost its catalytic function. An active PH domain uses inorganic phosphate as a nucleophile, adding it across the phosphodiester bond between the end two nucleotides in order to release ribonucleoside 5'-diphosphate (rNDP) from the 3' end of the RNA substrate. PH domains can be found in bacterial/organelle RNases and PNPases (polynucleotide phosphorylases) [], as well as in archaeal and eukaryotic RNA exosomes [, ], the later acting as nano-compartments for the degradation or processing of RNA (including mRNA, rRNA, snRNA and snoRNA). Bacterial/organelle PNPases share a common barrel structure with RNA exosomes, consisting of a hexameric ring of PH domains that act as a degradation chamber, and an S1-domain/KH-domain containing cap that binds the RNA substrate (and sometimes accessory proteins) in order to regulate and restrict entry into the degradation chamber []. Unstructured RNA substrates feed in through the pore made by the S1 domains, are degraded by the PH domain ring, and exit as nucleotides via the PH pore at the opposite end of the barrel [, ]. This entry represents the phosphorolytic (PH) domain 2, which has a core 3-layer alpha/beta/alpha structure. This domain is found in bacterial/organelle PNPases and in archaeal/eukaryotic exosomes []. More information about these proteins can be found at Protein of the Month: RNA Exosomes [].; GO: 0003723 RNA binding, 0006396 RNA processing; PDB: 1E3H_A 1E3P_A 2NN6_E 2WNR_A 3U1K_B 2BA0_H 2BA1_H 3M85_G 3M7N_H 3H1C_K ....
Probab=98.91 E-value=1.3e-08 Score=76.71 Aligned_cols=66 Identities=21% Similarity=0.246 Sum_probs=58.0
Q ss_pred ceEEEEEEEeeCCeEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEee--ecHHHHHHHHHHHHhc
Q psy6508 250 DLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGT--IQQERLADHIEQLIGC 325 (477)
Q Consensus 250 ~~v~a~s~~~~~~~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~--~~~~~~~~~l~~~~~~ 325 (477)
++++++|+++.++.+++||+.+||.. +.+.+++++.++.+.+..++..|. ++++++.++++.|.++
T Consensus 1 ~~~~avt~~~i~~~~v~Dpt~~Ee~~----------~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~i~~A~~~ 68 (68)
T PF03725_consen 1 DPPVAVTVGIIDGELVVDPTAEEESL----------SDSSLTLAVDGTGNICTLQKSGGGSELSEDQLEEAIELAKKA 68 (68)
T ss_dssp SEEEEEEEEEETTEEEES--HHHHHH----------SSEEEEEEEETTSSEEEEEEEEESSEEEHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEECCEEEECCCHHHHhh----------cCCcEEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHHhcC
Confidence 57999999999999999999999985 478999999998888888888887 9999999999999875
No 468
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.89 E-value=1.5e-08 Score=89.83 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEc
Q psy6508 23 DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHF 102 (477)
Q Consensus 23 ~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHr 102 (477)
++-.+|+.++.++.--.|.--+=+..+.....|+|||.+|..|.+++... . ..+++.+-.-+.-||..||+|+
T Consensus 44 ~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~givHG 116 (204)
T COG3642 44 ERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIVHG 116 (204)
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCeecC
Confidence 46788999999986444444443445666778999999999999998774 2 4456667777788999999999
Q ss_pred cCCCCceeeccCcceeeccccccee
Q psy6508 103 DLKPQNILIKNNTLKLAGLKQGVSE 127 (477)
Q Consensus 103 Dlkp~NIll~~~~~rl~~~dfG~~~ 127 (477)
||.++||++.++++ ..+|||+..
T Consensus 117 DLTtsNiIl~~~~i--~~IDfGLg~ 139 (204)
T COG3642 117 DLTTSNIILSGGRI--YFIDFGLGE 139 (204)
T ss_pred CCccceEEEeCCcE--EEEECCccc
Confidence 99999999988764 445999875
No 469
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.86 E-value=9.4e-09 Score=106.14 Aligned_cols=100 Identities=18% Similarity=0.221 Sum_probs=67.9
Q ss_pred HHHHHHHHHhcC-----CCC--ccceEEEEEeCCeEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHH
Q psy6508 25 IVNEIKALKLLH-----HQH--IVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVL-ALKFLR 95 (477)
Q Consensus 25 ~~~E~~il~~l~-----Hpn--Iv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~l~~~~~~~i~~qi~~-aL~~LH 95 (477)
|.+|...+.+++ +|+ +++++. ...+..+|||||++|++|.++.... ...+ ...++.+++. .+..+|
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHH
Confidence 556777666662 232 334332 2234568999999999999876532 1222 3345556655 467889
Q ss_pred hCCcEEccCCCCceeeccCcceeecccccceeccc
Q psy6508 96 ENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAK 130 (477)
Q Consensus 96 ~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~ 130 (477)
..|++|+|+||.||++++++ ++..+|||.+...+
T Consensus 275 ~~g~~H~D~hPgNilv~~~g-~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKDG-KIIALDFGIVGRLS 308 (437)
T ss_pred hCCceeCCCCcccEEECCCC-cEEEEeCCCeeECC
Confidence 99999999999999997653 45566999986554
No 470
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.86 E-value=2.1e-09 Score=112.46 Aligned_cols=99 Identities=17% Similarity=0.308 Sum_probs=62.9
Q ss_pred HHHHHHHHHhcC----CCCccceEEEEE-eCCeEEEEEecCCCCCHHHH--HHhCC----CCCHHHHHHHHHHHHHHHHH
Q psy6508 25 IVNEIKALKLLH----HQHIVTMLDFLW-DERYVYIILEYCDGGDLCSF--IRSHE----KLSEFQCQQFVRQLVLALKF 93 (477)
Q Consensus 25 ~~~E~~il~~l~----HpnIv~~~~~~~-~~~~~~lv~e~~~g~sL~~~--l~~~~----~l~~~~~~~i~~qi~~aL~~ 93 (477)
+.+|...+.+++ +.+.+.+-.++. -.+.-+|||||++|+++.++ +...+ .+.+..+..++.|+
T Consensus 203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi------ 276 (537)
T PRK04750 203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV------ 276 (537)
T ss_pred HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH------
Confidence 455555555552 333333333322 23456899999999999874 33322 13333444444454
Q ss_pred HHhCCcEEccCCCCceeeccCc---ceeecccccceeccc
Q psy6508 94 LRENNVCHFDLKPQNILIKNNT---LKLAGLKQGVSEKAK 130 (477)
Q Consensus 94 LH~~givHrDlkp~NIll~~~~---~rl~~~dfG~~~~~~ 130 (477)
...|++|+|+||.||+++.++ .+++.+|||+....+
T Consensus 277 -f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 -FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 468999999999999997653 467778999986554
No 471
>TIGR02696 pppGpp_PNP guanosine pentaphosphate synthetase I/polynucleotide phosphorylase. Sohlberg, et al. present characterization of two proteins from Streptomyces coelicolor. The protein in this family was shown to have poly(A) polymerase activity and may be responsible for polyadenylating RNA in this species. Reference 2 showed that a nearly identical plasmid-encoded protein from Streptomyces antibioticus is a bifunctional enzyme that acts also as a guanosine pentaphosphate synthetase.
Probab=98.85 E-value=1e-07 Score=101.39 Aligned_cols=200 Identities=16% Similarity=0.107 Sum_probs=140.3
Q ss_pred eccccc-ceecccCCccccc-CCeEEEeccccccccCCCCCcccccCcceEEEEEE----eeeccccccccCCCCCcchH
Q psy6508 119 AGLKQG-VSEKAKGSAYIEQ-GNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEF----KFAPFASQIRTGWLRDSEEK 192 (477)
Q Consensus 119 ~~~dfG-~~~~~~gs~~~~~-g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~----~~~Pf~~~~r~~~~~~~~~~ 192 (477)
+.+.+| +++.++|+..... |+|.+.+.+-..-+...+. |+ +-+-+=+-|- |.-|=. ..++...+...+.
T Consensus 19 ~~~etG~~A~qA~Gav~v~~~G~t~vl~t~~~~~~~~~~~---dF-~PLtV~y~Ek~yA~GkiPgg-f~kREgrps~~ei 93 (719)
T TIGR02696 19 IRFETGRLARQAAGSVVAYLDDETMLLSATTASKQPKDQF---DF-FPLTVDVEERMYAAGRIPGS-FFRREGRPSTDAI 93 (719)
T ss_pred EEEEcchhHhhCCceEEEEecCCeEEEEEEEecCCCCCCC---CC-cceeEeeeehhhhcCccCCc-eeccCCCCChhhh
Confidence 345666 4567999999988 9999988776555544443 44 3333332332 222222 1223334555566
Q ss_pred HHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCc--hHHHHHHHHHHHHhhCCCCCCceEEEEEEEeeCCeEEeCCCh
Q psy6508 193 ELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGS--ALSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVE 270 (477)
Q Consensus 193 ~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~--~~~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~~~~~Dp~~ 270 (477)
..++++.+.++|... +.-+..++|.+.+|..|+. .-..|+|||++||.-++||..+.++|+-++..+|..+++||.
T Consensus 94 L~sRliDR~iRPLFp--~~~~~e~qi~~~vls~D~~~~pdvla~~~ASaAl~iSdiPf~gPv~~vrVg~i~g~~viNPt~ 171 (719)
T TIGR02696 94 LTCRLIDRPLRPSFV--KGLRNEVQVVVTVLSLNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIDGQWVAFPTH 171 (719)
T ss_pred HHHHhhCCCCccCCC--CCCCcceEEEEEEEEcCCCCChHHHHHHHHHHHHHhcCCCCCCceEEEEEEEECCEEEECcCH
Confidence 667777777766552 2224557788899999985 445689999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCCCceEEEEEccC---CCcEEEEEE------------E-eeecHHHHHHHHHHHHhcccchhhHHH
Q psy6508 271 EEVAYCQSLSSSEDDDSGVITLSYMSV---IQQVTQVTL------------V-GTIQQERLADHIEQLIGCCESLCTDRV 334 (477)
Q Consensus 271 ~E~~~~~~~~~~~~~~~~~~~~a~~~~---~~~i~~~~~------------~-g~~~~~~~~~~l~~~~~~~~~i~~~~i 334 (477)
.|.+. +.-.+++|-... .+.|+.++. . ..++.+.+.++|+.+.+.++.+... +
T Consensus 172 ~~~~~----------s~ldLvvagt~~~~~~~~i~MiE~~a~~~~~~~~~~~a~e~~e~~~~~Ai~~a~~~i~~~~~~-~ 240 (719)
T TIGR02696 172 EQLEG----------AVFDMVVAGRVLENGDVAIMMVEAEATEKTWDLVKGGAEAPTEEVVAEGLEAAKPFIKVLCRA-Q 240 (719)
T ss_pred HHHhh----------CeeeEEEEeeecCCCCccEEEEecCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHH-H
Confidence 99873 234455543210 237888886 3 2478999999999999999999888 6
Q ss_pred Hh
Q psy6508 335 QK 336 (477)
Q Consensus 335 ~~ 336 (477)
.+
T Consensus 241 ~~ 242 (719)
T TIGR02696 241 AD 242 (719)
T ss_pred HH
Confidence 55
No 472
>KOG1613|consensus
Probab=98.74 E-value=1.7e-07 Score=84.85 Aligned_cols=203 Identities=22% Similarity=0.317 Sum_probs=142.7
Q ss_pred CcceeecccccceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEeeeccccccccCCCCCcchHH
Q psy6508 114 NTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEKE 193 (477)
Q Consensus 114 ~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~~ 193 (477)
++.|-+.+..|.+..++||+....|+|.+.|..-+- +.. +..|- -.-|++..++.++|..+..-++.++......
T Consensus 44 gefRdt~in~g~IsTangSal~K~G~ttvi~~Ik~e--i~e--pstda-pdeg~Iv~n~~lpplcs~r~RpG~p~dea~v 118 (298)
T KOG1613|consen 44 GEFRDTAINAGNISTANGSALLKSGKTTVICGIKAE--IAE--PSTDA-PDEGDIVPNYALPPLCSSRFRPGPPTDEAQV 118 (298)
T ss_pred hHHhhhheecCceeccCcHHHHhcCCcEEEEEeeee--ecc--cccCC-CCCcceeecccCCcccccCCCCCCCchHHHH
Confidence 456777778999999999999999999999986431 111 11233 4568888888899998776666667777777
Q ss_pred HHHHHHHHhhhhh-------h-cccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCCCC--------------ce
Q psy6508 194 LGNHLKRALEPAV-------C-RHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIPMY--------------DL 251 (477)
Q Consensus 194 l~~~i~~~l~~~i-------~-~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~m~--------------~~ 251 (477)
+++.+.+.+...- | ...---|.....+.+|..||.++.+|.+|+..||-+-.+|.- ..
T Consensus 119 iSq~LhdtIl~S~ii~~k~Lci~~gKaawvlYadIicLd~dG~~fDa~w~al~aAlknvklP~a~ide~~~~~~~t~e~~ 198 (298)
T KOG1613|consen 119 ISQKLHDTILHSRIIPKKALCIKAGKAAWVLYADIICLDYDGPVFDACWNALMAALKNVKLPRAFIDERASDLRMTIEEI 198 (298)
T ss_pred HHHHHHHHHHhcCCcchhhheeeccceeeEEEEEEEEEcCCCcHHHHHHHHHHHHHhcCCCceeeecccchhhhhhHHHH
Confidence 7777776665431 1 111223556667889999999999999999999988887611 11
Q ss_pred EEEEEE------------------------EeeCCeEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEE
Q psy6508 252 VTSSTL------------------------ALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLV 307 (477)
Q Consensus 252 v~a~s~------------------------~~~~~~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~ 307 (477)
.+..+. .+.+..++.|||.+||.. ..+.+|+.. .++++++++...
T Consensus 199 ic~~tlt~p~~ln~e~r~~~~~n~~fS~~~vl~~~li~adpT~eEE~l----------~~~~lTIvl-dss~n~v~l~k~ 267 (298)
T KOG1613|consen 199 ICDQTLTVPLMLNAENRAFASQNSDFSEEEVLDDVLIAADPTEEEETL----------ITSTLTIVL-DSSGNYVQLTKV 267 (298)
T ss_pred HHhhhhcchhhhccccccccccCCCccHHHhhcceeEecCCCchhhhh----------hhceEEEEE-cCCCCEEEEEec
Confidence 111111 111223557999999884 377788865 556777777776
Q ss_pred ee---ecHHHHHHHHHHHHhcccchhhH
Q psy6508 308 GT---IQQERLADHIEQLIGCCESLCTD 332 (477)
Q Consensus 308 g~---~~~~~~~~~l~~~~~~~~~i~~~ 332 (477)
|. .+++.+++++++|...++.+...
T Consensus 268 GG~al~~~~~iK~c~elar~Rakelk~~ 295 (298)
T KOG1613|consen 268 GGGALITPEMIKRCLELARVRAKELKTR 295 (298)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 54 56799999999999988887765
No 473
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.73 E-value=3.5e-08 Score=89.67 Aligned_cols=120 Identities=22% Similarity=0.245 Sum_probs=78.0
Q ss_pred CCCcEEEEEEcccCCCC----------------------h--hHHHHHHHHHHHHHhcCCC--CccceEEEEEeCCeEEE
Q psy6508 2 EQHTEVAIKCIDKTKVS----------------------E--NRFDSIVNEIKALKLLHHQ--HIVTMLDFLWDERYVYI 55 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~----------------------~--~~~~~~~~E~~il~~l~Hp--nIv~~~~~~~~~~~~~l 55 (477)
++|..+|+|+.+....+ . -......+|...|.++..- ++++.+++. + -+|
T Consensus 8 ~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~--~--~~i 83 (188)
T PF01163_consen 8 PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN--R--NVI 83 (188)
T ss_dssp CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE--T--TEE
T ss_pred CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe--C--CEE
Confidence 46889999987663111 0 0123578999999999654 678887653 2 369
Q ss_pred EEecCC--CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHhCCcEEccCCCCceeeccCcceeecccccceecc
Q psy6508 56 ILEYCD--GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKF-LRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKA 129 (477)
Q Consensus 56 v~e~~~--g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~-LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~ 129 (477)
||||++ |..+..+... .++......++.+++..+.. +|..|++|+||.+.||+++++ ++..+|||.+...
T Consensus 84 vME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~--~~~iIDf~qav~~ 156 (188)
T PF01163_consen 84 VMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG--KVYIIDFGQAVDS 156 (188)
T ss_dssp EEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT--CEEE--GTTEEET
T ss_pred EEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc--eEEEEecCcceec
Confidence 999998 7667664432 22245567778888886655 579999999999999999988 5556699977543
No 474
>KOG1612|consensus
Probab=98.71 E-value=1.9e-06 Score=78.82 Aligned_cols=207 Identities=24% Similarity=0.279 Sum_probs=144.4
Q ss_pred CcceeecccccceecccCCcccccCC-eEEEeccc---cccccCCCCCcccccCcceEEEEEEeeeccccccccCCCCCc
Q psy6508 114 NTLKLAGLKQGVSEKAKGSAYIEQGN-TKVICSVF---EPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLRDS 189 (477)
Q Consensus 114 ~~~rl~~~dfG~~~~~~gs~~~~~g~-t~v~~~~y---~ppE~~~~~~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~ 189 (477)
.+.|++....|+.+..+||+.+..|. |.+...+- +.|.... ..-|.+.+.+-..|-.+..-...-++.
T Consensus 29 ~~~Rpi~vetdVlp~tNGSaRVk~g~~tdiivgVKaEvg~~~~~~--------p~egk~~~~VD~S~sasp~f~gRggde 100 (288)
T KOG1612|consen 29 HQFRPIEVETDVLPGTNGSARVKLGDGTDIIVGVKAEVGSPDDET--------PVEGKYLFFVDCSPSASPQFQGRGGDE 100 (288)
T ss_pred cccceEEEEeccccCCCCcEEEEecCCceEEEEEeeeccCccccC--------CCCCeEEEEEEecCCcCccccCCChhh
Confidence 36889999999999999999999988 66666653 3332211 334555555555454433222233455
Q ss_pred chHHHHHHHHHHhhh--------hhhcccCCCCcccEEEEEEeCCCchHHHHHHHHHHHHhhCCCC--------------
Q psy6508 190 EEKELGNHLKRALEP--------AVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVDAAIP-------------- 247 (477)
Q Consensus 190 ~~~~l~~~i~~~l~~--------~i~~~~~Pr~~i~i~v~vL~~dg~~~~a~inaa~lAL~dagi~-------------- 247 (477)
-..++...+++++.. .+++.+--+|.|.+.+-+++.||+.+.+.--|+-.||-+.-+|
T Consensus 101 ~~~eltsaLq~~l~~~~sgv~ls~L~lt~~~~W~i~VDvlVi~s~gn~~dAiS~Ai~~AL~~T~lPkv~v~~dd~~~~~i 180 (288)
T KOG1612|consen 101 LVEELTSALQRVLNSLGSGVDLSKLQLTPGYCWKIYVDVLVISSDGNLLDAISIAIYAALNNTRLPKVIVAFDDDGEVEI 180 (288)
T ss_pred HHHHHHHHHHHHHhCcCcccchhheeccCCeeEEEEEeEEEEecCCCHHHHHHHHHHHHHhcccCCccccccccCCceee
Confidence 566777777777765 1223333568899999999999999999999999999888766
Q ss_pred -----CCc--------eEEEEEEEeeCCeEEeCCChHHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEE--eeecH
Q psy6508 248 -----MYD--------LVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLV--GTIQQ 312 (477)
Q Consensus 248 -----m~~--------~v~a~s~~~~~~~~~~Dp~~~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~--g~~~~ 312 (477)
=+| +..-++++.++..+++||+.+||.. +...+.+++ ...+-++++... |...+
T Consensus 181 ~~s~~~Yd~~~~~~~~~P~ivtlskIG~~~lVD~T~eEe~~----------a~s~l~Isv-~a~givs~~r~VG~G~l~~ 249 (288)
T KOG1612|consen 181 LLSDEEYDLMVKLVENVPLIVTLSKIGTNMLVDPTAEEESV----------ANSGLLISV-SAGGIVSCTRSVGLGDLDP 249 (288)
T ss_pred ccCcccchhhhhhcccCCEEEEEEeecceEEccCCccHHHh----------hhcceEEEE-ecCcceEEEEEecCCCCCh
Confidence 111 2233566777899999999999984 355666665 344556666555 45889
Q ss_pred HHHHHHHHHHHhcccchhhHHHHhHhhh
Q psy6508 313 ERLADHIEQLIGCCESLCTDRVQKLVSD 340 (477)
Q Consensus 313 ~~~~~~l~~~~~~~~~i~~~~i~~~l~~ 340 (477)
+....+|+.+++-.+.+... +...|.+
T Consensus 250 s~i~~mle~~~~~~e~l~~~-l~k~L~~ 276 (288)
T KOG1612|consen 250 SSIPEMLEQGKAVVETLAPD-LVKSLEN 276 (288)
T ss_pred hhHHHHHHHHHHHHHhhhHH-HHHHhhh
Confidence 99999999999999988888 6665544
No 475
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.71 E-value=1.5e-07 Score=87.34 Aligned_cols=105 Identities=21% Similarity=0.271 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHhcC--CCCccceEEEEEeC----CeEEEEEecCCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Q psy6508 23 DSIVNEIKALKLLH--HQHIVTMLDFLWDE----RYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR 95 (477)
Q Consensus 23 ~~~~~E~~il~~l~--HpnIv~~~~~~~~~----~~~~lv~e~~~g-~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH 95 (477)
.+..+|...+..|. .=.+++.+.+.+.. ...++|||+++| .+|.+++......+......++.+++..+.-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 46788999888884 33456667766543 246899999987 489999987555777788899999999999999
Q ss_pred hCCcEEccCCCCceeeccCc--ceeeccccccee
Q psy6508 96 ENNVCHFDLKPQNILIKNNT--LKLAGLKQGVSE 127 (477)
Q Consensus 96 ~~givHrDlkp~NIll~~~~--~rl~~~dfG~~~ 127 (477)
.+||+|+|++|.|||++.++ .++..+||+-+.
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~ 169 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR 169 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence 99999999999999997653 566666887654
No 476
>KOG3087|consensus
Probab=98.68 E-value=1.7e-07 Score=82.91 Aligned_cols=125 Identities=19% Similarity=0.174 Sum_probs=88.5
Q ss_pred CCcEEEEEEcccCCC-Ch-----hHHHHHHHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCC-CCHHHHHHhCC--
Q psy6508 3 QHTEVAIKCIDKTKV-SE-----NRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG-GDLCSFIRSHE-- 73 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~-~~-----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g-~sL~~~l~~~~-- 73 (477)
.|+...||.=..+.. .+ -..++..+|.+.|.++.--.|.--.=++.+.+.-.|+|||++| .++.+++....
T Consensus 29 ~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~ 108 (229)
T KOG3087|consen 29 SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMED 108 (229)
T ss_pred CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccC
Confidence 466667774222221 11 1235678899999988644444444455666667899999985 48999987643
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC--cceeeccccccee
Q psy6508 74 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN--TLKLAGLKQGVSE 127 (477)
Q Consensus 74 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~--~~rl~~~dfG~~~ 127 (477)
.........++.+|-+.+.-||.++++|+||..+||++.++ ...+..+|||++.
T Consensus 109 ~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 109 ESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred cccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchh
Confidence 23333347889999999999999999999999999999764 4444788999863
No 477
>KOG4591|consensus
Probab=98.68 E-value=8.8e-09 Score=90.48 Aligned_cols=91 Identities=22% Similarity=0.246 Sum_probs=71.4
Q ss_pred chhhHHhhhcCcceeEEEEecCccceeeEeeeehhhhcccHHHHHhcCCCcccc-CCcccCCCCHHHHHHHhhhhhcCce
Q psy6508 345 PERGRYVLNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEK-GDTKILDITPEAFSTMLDSDHHARV 423 (477)
Q Consensus 345 ~~r~~~~~~~~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~~-~~~~~~~~~~~~~~~~l~~~Ytg~~ 423 (477)
+.....+++..+|+|++|.++|... +.++|||-||||||.+.. |.++..|+ .+..++|+++++|..+++++||+++
T Consensus 54 LaitadL~Ek~qfSDlk~K~~gns~-k~i~AHKfVLAARsD~Wk--faN~~dekse~~~~dDad~Ea~~t~iRWIYTDEi 130 (280)
T KOG4591|consen 54 LAITADLLEKEQFSDLKFKFAGNSD-KHIPAHKFVLAARSDFWK--FANGGDEKSEELDLDDADFEAFHTAIRWIYTDEI 130 (280)
T ss_pred HHHHHHHhhcccccceeEEecCCcc-ccCchhhhhhhhhcchhh--hccCCCcchhhhcccccCHHHHHHhheeeecccc
Confidence 3344558999999999999985222 789999999999999765 45555554 4457889999999999999999999
Q ss_pred eeCccc--hhhhhhccc
Q psy6508 424 NISSDH--HARVSISSD 438 (477)
Q Consensus 424 ~~~~~~--~~~~~~~a~ 438 (477)
++..++ +-.|+..|.
T Consensus 131 dfk~dD~~L~el~e~An 147 (280)
T KOG4591|consen 131 DFKEDDEFLLELCELAN 147 (280)
T ss_pred ccccchHHHHHHHHHHH
Confidence 987765 445666665
No 478
>KOG0601|consensus
Probab=98.58 E-value=2.3e-08 Score=102.65 Aligned_cols=169 Identities=19% Similarity=0.177 Sum_probs=130.2
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCC-CCHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEK-LSEFQ 79 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~-l~~~~ 79 (477)
.++..+|+|.-+.....+....+=.+|+...+.+ .|+|.++.+..|+..+..++-+|+|. .+|..+...... ++...
T Consensus 141 ~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~ 219 (524)
T KOG0601|consen 141 ESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNL 219 (524)
T ss_pred cCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeecccc-chhHHhhhcccccCCchh
Confidence 4677889988544443333333345677777778 59999999999999999999999996 899999877655 88889
Q ss_pred HHHHHHHHHH----HHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCC--e-EEEecccccccc
Q psy6508 80 CQQFVRQLVL----ALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGN--T-KVICSVFEPREI 152 (477)
Q Consensus 80 ~~~i~~qi~~----aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~--t-~v~~~~y~ppE~ 152 (477)
+...+.+..+ ||.++|+.+++|-|+||.||+...+.......|||.+............. . -.+-..|++||.
T Consensus 220 l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~ 299 (524)
T KOG0601|consen 220 LWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKEL 299 (524)
T ss_pred hhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhh
Confidence 9999999999 99999999999999999999998874455567999887544332111100 1 134457999999
Q ss_pred CCCC--CcccccCcceEEEEEE
Q psy6508 153 PSSK--TSLEYQRSKGELYVEF 172 (477)
Q Consensus 153 ~~~~--~~~Di~~s~G~il~e~ 172 (477)
..+. ...|+ +++|.++.+.
T Consensus 300 ~~~l~~~~~di-~sl~ev~l~~ 320 (524)
T KOG0601|consen 300 LNGLATFASDI-FSLGEVILEA 320 (524)
T ss_pred hccccchHhhh-cchhhhhHhh
Confidence 9877 77899 9999999887
No 479
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.55 E-value=2.4e-07 Score=86.38 Aligned_cols=122 Identities=17% Similarity=0.190 Sum_probs=86.8
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCC--CCccceEEEEEeC---CeEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH--QHIVTMLDFLWDE---RYVYIILEYCDGGDLCSFIRSHEKLSEF 78 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H--pnIv~~~~~~~~~---~~~~lv~e~~~g~sL~~~l~~~~~l~~~ 78 (477)
|+.+++|........ .....+.+|+.+++.+++ .++++++.+.... +..+++|||++|.++.+.+.. ..++..
T Consensus 22 g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~-~~~~~~ 99 (223)
T cd05154 22 GRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR-PELSPE 99 (223)
T ss_pred CcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC-CCCCHH
Confidence 578999987654321 123467899999999965 4568888776553 367899999999888775432 346666
Q ss_pred HHHHHHHHHHHHHHHHHh--------------------------------------------------------CCcEEc
Q psy6508 79 QCQQFVRQLVLALKFLRE--------------------------------------------------------NNVCHF 102 (477)
Q Consensus 79 ~~~~i~~qi~~aL~~LH~--------------------------------------------------------~givHr 102 (477)
....++.+++.+|..||+ ..++|+
T Consensus 100 ~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hg 179 (223)
T cd05154 100 ERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHG 179 (223)
T ss_pred HHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEEC
Confidence 777777777777777773 236899
Q ss_pred cCCCCceeeccC-cceeeccccccee
Q psy6508 103 DLKPQNILIKNN-TLKLAGLKQGVSE 127 (477)
Q Consensus 103 Dlkp~NIll~~~-~~rl~~~dfG~~~ 127 (477)
|++|.||+++++ .-....+||+.+.
T Consensus 180 D~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 180 DYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred CCCcccEEEcCCCCcEEEEEeccccc
Confidence 999999999873 2233456887664
No 480
>COG1185 Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis]
Probab=98.46 E-value=4.1e-06 Score=87.34 Aligned_cols=202 Identities=17% Similarity=0.219 Sum_probs=144.5
Q ss_pred eeeccccc-ceecccCCcccccCCeEEEeccccccccCCCCCcccccCcceEEEEEEee--ecccc-ccccCCCCCcchH
Q psy6508 117 KLAGLKQG-VSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKF--APFAS-QIRTGWLRDSEEK 192 (477)
Q Consensus 117 rl~~~dfG-~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~~~~Di~~s~G~il~e~~~--~Pf~~-~~r~~~~~~~~~~ 192 (477)
|.+.+..| ++++++|+.....|.|.+.+.+-++. ...+. |+ +-+-+=+-|-.| .-+++ -.++...+...+.
T Consensus 14 ~~l~~etg~~A~qa~gav~~~~gdt~vl~t~~~~~-~~~~~---dF-~PLtV~y~Ek~yaaGkiPGgf~kREGrpse~e~ 88 (692)
T COG1185 14 RTLTLETGKIARQANGAVLVRYGDTVVLATVVASK-PKEGQ---DF-FPLTVNYEEKTYAAGKIPGGFFKREGRPSEKEI 88 (692)
T ss_pred eeEEEEcchhhhhcCccEEEEECCeEEEEEEeecC-CCCCC---Cc-cceeEeeeeehhccCcCCCcccccCCCCCccch
Confidence 33445666 45678999999999999999988876 44444 55 444333333322 11111 1233335556666
Q ss_pred HHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCch--HHHHHHHHHHHHhhCCCCCCceEEEEEEEeeCCeEEeCCCh
Q psy6508 193 ELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSA--LSAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVE 270 (477)
Q Consensus 193 ~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~--~~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~~~~~Dp~~ 270 (477)
..++++.+.++|.. ..--+..++|...++..|+.. -..+++++++||.-++||....++++.++.++|..+++|+.
T Consensus 89 L~sRLIDRpiRPlF--p~g~~~evqIv~tvls~D~~~~pdi~a~~gaSaAl~is~iPf~gpi~~vrvg~idg~~vlNPt~ 166 (692)
T COG1185 89 LTSRLIDRPIRPLF--PKGFRNEVQIVNTVLSVDPENDPDILAMVGASAALSLSGIPFLGPIGAVRVGYIDGIFVLNPTL 166 (692)
T ss_pred hhhhhccccccccc--chhhccceEEEEEEEEECCCCCHHHHHHHHHHHHHhccCCCccCccceEEEEEECCEEEECCCh
Confidence 67777777766554 222355688899999999864 45689999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEee-ecHHHHHHHHHHHHhcccchhhHHHHhHh
Q psy6508 271 EEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGT-IQQERLADHIEQLIGCCESLCTDRVQKLV 338 (477)
Q Consensus 271 ~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~-~~~~~~~~~l~~~~~~~~~i~~~~i~~~l 338 (477)
+|.+. +.+-+.+..+.+.|..++.... ++.+.+.+++..+.+..+.+.+. +.+..
T Consensus 167 ~e~~~------------s~lDlvVAGT~~aV~MVE~~a~~l~E~~ml~Av~fg~~~~~~~~~~-qe~l~ 222 (692)
T COG1185 167 EELEE------------SKLDLVVAGTKDAVNMVESEADELDEEVMLEAVEFGHEAIQSVINA-QEELA 222 (692)
T ss_pred HHhhh------------cceeeEecCChhhhheeecccccCCHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 99873 3444444455557888888754 67889999999999999999888 44433
No 481
>KOG0601|consensus
Probab=98.39 E-value=3.1e-07 Score=94.42 Aligned_cols=166 Identities=21% Similarity=0.153 Sum_probs=118.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhc-CCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQC 80 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~ 80 (477)
.++..|++|.+.+..........-..|+.+...+ .|.++++++..|......|+-.|||+++++.....-...+.+...
T Consensus 289 ~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~ 368 (524)
T KOG0601|consen 289 EGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPR 368 (524)
T ss_pred CCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchh
Confidence 4567788888766655444334456788888777 599999999988888888899999999998877755457888999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccceecccCCcccccCCeEEEeccc-cccccCCCC---
Q psy6508 81 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVF-EPREIPSSK--- 156 (477)
Q Consensus 81 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y-~ppE~~~~~--- 156 (477)
+++..|++.++.++|+..++|+|+||+||++..+..-....+||+.... .+..+....+...| .++......
T Consensus 369 ~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~----~~~~~~~~~~~r~~p~~~~~~e~~~~~ 444 (524)
T KOG0601|consen 369 LRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL----AFSSGVFHHIDRLYPIAEILLEDYPHL 444 (524)
T ss_pred hhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccc----ceecccccccccccccchhhccccccc
Confidence 9999999999999999999999999999999764322223356554321 11222222223334 233333332
Q ss_pred CcccccCcceEEEEEE
Q psy6508 157 TSLEYQRSKGELYVEF 172 (477)
Q Consensus 157 ~~~Di~~s~G~il~e~ 172 (477)
..+|+ +++|.-+.+.
T Consensus 445 ~~~~~-~sl~~~~~e~ 459 (524)
T KOG0601|consen 445 SKADI-FSLGLSVDEA 459 (524)
T ss_pred ccccc-cccccccccc
Confidence 66788 9999888887
No 482
>KOG0783|consensus
Probab=98.36 E-value=8.1e-08 Score=100.34 Aligned_cols=88 Identities=23% Similarity=0.214 Sum_probs=71.9
Q ss_pred CcceeEEEEecCccceeeEeeeehhhhcccHHHHHhcCCCccccCCcccC--CCCHHHHHHHhhhhh-cCceeeCc----
Q psy6508 355 GLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKIL--DITPEAFSTMLDSDH-HARVNISS---- 427 (477)
Q Consensus 355 ~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~~~~~~~~--~~~~~~~~~~l~~~Y-tg~~~~~~---- 427 (477)
.+.-|+.+...+| ++|+|||.+|+||++||..||..-|.|.+.+... -++.+.++.+|+|+| +.+..+-.
T Consensus 708 ~e~~d~~i~~KDG---kvl~aHkc~L~aRlEYF~smf~~~w~E~sS~t~~~~p~~~e~m~ivLdylYs~d~~~~~k~~~~ 784 (1267)
T KOG0783|consen 708 EETMDTVIKLKDG---KVLKAHKCFLSARLEYFSSMFQFVWMESSSITVNLSPLTVEHMSIVLDYLYSDDKVELFKDLKE 784 (1267)
T ss_pred ccceeEEEEecCC---cCcccceeEeeeHHHHHHHHHHHHHhhhccceeecCcchHHHHHHHHHHHHccchHHHHhccch
Confidence 5566777777654 8899999999999999999999999997766555 456999999999999 66665533
Q ss_pred -cchhhhhhccccceeecc
Q psy6508 428 -DHHARVSISSDHHTRVSI 445 (477)
Q Consensus 428 -~~~~~~~~~a~~~~~~~~ 445 (477)
+-+..++..||.++|.++
T Consensus 785 ~dF~~~il~iaDqlli~~L 803 (1267)
T KOG0783|consen 785 SDFMFEILSIADQLLILEL 803 (1267)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 347789999998888765
No 483
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.34 E-value=3.6e-06 Score=77.56 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=73.1
Q ss_pred CCcEEEEEEcccCCCChh-HHHH------HHHHHHHHHhcCC---CCccceEEEEE-----eCCeEEEEEecCCCCCHHH
Q psy6508 3 QHTEVAIKCIDKTKVSEN-RFDS------IVNEIKALKLLHH---QHIVTMLDFLW-----DERYVYIILEYCDGGDLCS 67 (477)
Q Consensus 3 ~g~~vAiK~i~~~~~~~~-~~~~------~~~E~~il~~l~H---pnIv~~~~~~~-----~~~~~~lv~e~~~g~sL~~ 67 (477)
+|+.+.+|..+.+..-.+ .... ..+++..+.+++. -....++-+.+ -....+++|||++|..|.+
T Consensus 53 ~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d 132 (229)
T PF06176_consen 53 DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELND 132 (229)
T ss_pred CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEecCeeccc
Confidence 467788887655432211 1111 2344444444432 23333333322 2245679999999988876
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccCcceeecccccce
Q psy6508 68 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVS 126 (477)
Q Consensus 68 ~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~rl~~~dfG~~ 126 (477)
... +++ .+...+.+++.-+|+.|+.|+|.+|.|+++++++++++ ||+.-
T Consensus 133 ~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~i~iI--D~~~k 181 (229)
T PF06176_consen 133 IED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNGIRII--DTQGK 181 (229)
T ss_pred chh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCcEEEE--ECccc
Confidence 532 333 24456778899999999999999999999999998877 77654
No 484
>KOG1266|consensus
Probab=98.33 E-value=1.9e-07 Score=89.11 Aligned_cols=140 Identities=20% Similarity=0.273 Sum_probs=98.7
Q ss_pred HHHHhcCCCCccceEEEEEeC-----CeEEEEEecCCCCCHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC--C
Q psy6508 30 KALKLLHHQHIVTMLDFLWDE-----RYVYIILEYCDGGDLCSFIRSHE----KLSEFQCQQFVRQLVLALKFLREN--N 98 (477)
Q Consensus 30 ~il~~l~HpnIv~~~~~~~~~-----~~~~lv~e~~~g~sL~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~--g 98 (477)
..|-++-|.||++++.+|.+. ....+++||++.|+|.++|++.. .+......+|+.||+.||.|||+. -
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 334556799999999998654 35899999999999999998643 588999999999999999999986 6
Q ss_pred cEEccCCCCceeeccCcceeecccccceecccCCccc-ccCCe--EEEeccccccccCCCC---CcccccCcceEEEEEE
Q psy6508 99 VCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYI-EQGNT--KVICSVFEPREIPSSK---TSLEYQRSKGELYVEF 172 (477)
Q Consensus 99 ivHrDlkp~NIll~~~~~rl~~~dfG~~~~~~gs~~~-~~g~t--~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~ 172 (477)
|+|+++....|++..+++-.+ +.+.-.....+... ....+ ..+.+.|.+||.-... .++|| |++|...+||
T Consensus 199 iihgnlTc~tifiq~ngLIki--g~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dI-y~fgmcAlem 275 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKI--GSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDI-YKFGMCALEM 275 (458)
T ss_pred cccCCcchhheeecCCceEEe--cccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhh-hhhhHHHHHH
Confidence 999999999999987764333 22221111111110 00011 2234457777653322 67899 9999777777
No 485
>KOG3741|consensus
Probab=98.29 E-value=2.7e-06 Score=86.18 Aligned_cols=116 Identities=15% Similarity=0.232 Sum_probs=90.5
Q ss_pred CCCcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCCCccceEEEEE----eCCeEEEEEecCCC-CCHHHHHHh-----
Q psy6508 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW----DERYVYIILEYCDG-GDLCSFIRS----- 71 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~----~~~~~~lv~e~~~g-~sL~~~l~~----- 71 (477)
-+|..|++|++....... ...-..-++.++++.|+|+|++.++|. .+..+++|++|.++ ++|.++.-.
T Consensus 299 ~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t 376 (655)
T KOG3741|consen 299 VDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFT 376 (655)
T ss_pred cCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccc
Confidence 478999999984332211 112235688899999999999999886 34579999999875 677776521
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeeccC-cceee
Q psy6508 72 ----------HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119 (477)
Q Consensus 72 ----------~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~rl~ 119 (477)
+...++..++.++.|+..||.++|+.|+.-+-|.|.+|+++.+ .+|+.
T Consensus 377 ~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS 435 (655)
T KOG3741|consen 377 KRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRIS 435 (655)
T ss_pred cccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEe
Confidence 1247889999999999999999999999999999999999887 44444
No 486
>KOG0783|consensus
Probab=98.29 E-value=4.7e-07 Score=94.77 Aligned_cols=65 Identities=28% Similarity=0.452 Sum_probs=55.0
Q ss_pred CcceeEEEEecCccceeeEeeeehhhhcccHHHHHhcCCCccc--cCC------------cccCCCCHHHHHHHhhhhhc
Q psy6508 355 GLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCE--KGD------------TKILDITPEAFSTMLDSDHH 420 (477)
Q Consensus 355 ~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~--~~~------------~~~~~~~~~~~~~~l~~~Yt 420 (477)
..+.||+|.||+ +-|+|||-||+++|++||.+|...... .+. +...++.|..|+.+|+|+||
T Consensus 556 ds~hDVtf~vg~----~~F~aHKfIl~~rs~flrkL~l~~~~~s~~~dIY~~~~~~~~~~~~ve~i~p~mfe~lL~~iYt 631 (1267)
T KOG0783|consen 556 DSFHDVTFYVGT----SMFHAHKFILCARSSFLRKLLLQKKKSSVSNDIYIEEITQSHSTIRVEDIPPLMFEILLHYIYT 631 (1267)
T ss_pred cccceEEEEecC----eecccceEEEEeccHHHHHHHHhhccccccceeeeecccccCceeeeccCCHHHHHHHHHHHhc
Confidence 468899999999 999999999999999999999665432 222 24678999999999999999
Q ss_pred Cce
Q psy6508 421 ARV 423 (477)
Q Consensus 421 g~~ 423 (477)
+++
T Consensus 632 dt~ 634 (1267)
T KOG0783|consen 632 DTL 634 (1267)
T ss_pred ccc
Confidence 953
No 487
>PRK09902 hypothetical protein; Provisional
Probab=98.18 E-value=2.3e-05 Score=72.02 Aligned_cols=123 Identities=18% Similarity=0.115 Sum_probs=86.4
Q ss_pred CcEEEEEEcccCC-CC---hhHHHHHHHHHHHHHhcCC--CCccceEEEEEe----CCeEEEEEecCCC-CCHHHHHHhC
Q psy6508 4 HTEVAIKCIDKTK-VS---ENRFDSIVNEIKALKLLHH--QHIVTMLDFLWD----ERYVYIILEYCDG-GDLCSFIRSH 72 (477)
Q Consensus 4 g~~vAiK~i~~~~-~~---~~~~~~~~~E~~il~~l~H--pnIv~~~~~~~~----~~~~~lv~e~~~g-~sL~~~l~~~ 72 (477)
|+.+=+|.-.... -+ +-....|.+|+..|++|.. -.+++....... ....+||+|-++| .+|.+++.+.
T Consensus 41 g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~ 120 (216)
T PRK09902 41 GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQH 120 (216)
T ss_pred CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcC
Confidence 3456677654111 01 2234679999999999842 235555522221 1247899997654 7899988663
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeec-cCcceeecccccce
Q psy6508 73 --EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLAGLKQGVS 126 (477)
Q Consensus 73 --~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~-~~~~rl~~~dfG~~ 126 (477)
.+.+......++.+++..+.-||+.|+.|+|+.|.||+++ .++..+..+||-..
T Consensus 121 ~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 121 AVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred CcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 2457777889999999999999999999999999999997 45544666687654
No 488
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=97.97 E-value=3.3e-05 Score=72.89 Aligned_cols=92 Identities=16% Similarity=0.266 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHhcCCC--CccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcE
Q psy6508 23 DSIVNEIKALKLLHHQ--HIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 100 (477)
Q Consensus 23 ~~~~~E~~il~~l~Hp--nIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv 100 (477)
....+|...|++|... .+++.+++ +...+|||+++|..|... +++......++..|+.-+.-+-..|+|
T Consensus 154 l~A~rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiV 224 (304)
T COG0478 154 LAAEREFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIV 224 (304)
T ss_pred HHHHHHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCcc
Confidence 3467999999999655 78888775 456899999998666543 224555666777777777777789999
Q ss_pred EccCCCCceeeccC-cceeecccccc
Q psy6508 101 HFDLKPQNILIKNN-TLKLAGLKQGV 125 (477)
Q Consensus 101 HrDlkp~NIll~~~-~~rl~~~dfG~ 125 (477)
|+|+.+-||+++++ ++.++ ||--
T Consensus 225 HGDlSefNIlV~~dg~~~vI--DwPQ 248 (304)
T COG0478 225 HGDLSEFNILVTEDGDIVVI--DWPQ 248 (304)
T ss_pred ccCCchheEEEecCCCEEEE--eCcc
Confidence 99999999999876 55554 7753
No 489
>KOG4682|consensus
Probab=97.95 E-value=6.5e-06 Score=80.14 Aligned_cols=91 Identities=22% Similarity=0.153 Sum_probs=79.2
Q ss_pred HHhhhcCcceeEEEEecCccceeeEeeeehhhhcccHHHHHhcCCCccccCC--c--ccC--CCCHHHHHHHhhhhhcCc
Q psy6508 349 RYVLNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGD--T--KIL--DITPEAFSTMLDSDHHAR 422 (477)
Q Consensus 349 ~~~~~~~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~~~~--~--~~~--~~~~~~~~~~l~~~Ytg~ 422 (477)
..+|.+|.-+||.+.+-| .+++.||.=|+ .|+||.+||.|-++|.+. | +|+ .++.++|...+--+|.++
T Consensus 61 q~lf~q~enSDv~l~alg----~eWrlHk~yL~-QS~yf~smf~Gtw~es~~~iIqleI~Dp~Id~~al~~a~gsLY~dE 135 (488)
T KOG4682|consen 61 QNLFLQGENSDVILEALG----FEWRLHKPYLF-QSEYFKSMFSGTWKESSMNIIQLEIPDPNIDVVALQVAFGSLYRDE 135 (488)
T ss_pred HHHHhcCCCcceehhhcc----ceeeeeeeeee-ccHHHHHHhccccChhhCceEEEEcCCCcccHHHHHHHHhhhhhhh
Confidence 347889999999999999 99999999986 689999999999999433 3 454 689999999999999999
Q ss_pred eeeCccchhhhhhccccceeec
Q psy6508 423 VNISSDHHARVSISSDHHTRVS 444 (477)
Q Consensus 423 ~~~~~~~~~~~~~~a~~~~~~~ 444 (477)
+.+..+.+..|+-||-++..-+
T Consensus 136 veI~l~dv~gvlAaA~~lqldg 157 (488)
T KOG4682|consen 136 VEIKLSDVVGVLAAACLLQLDG 157 (488)
T ss_pred eeccHHHHHHHHHHHHHHHHhh
Confidence 9999999999999997665444
No 490
>KOG1067|consensus
Probab=97.89 E-value=6.7e-05 Score=76.07 Aligned_cols=197 Identities=19% Similarity=0.224 Sum_probs=126.1
Q ss_pred eeecccccce-ecccCCcccccCCeEEEeccccccccCCCC---CcccccCcceEEEEEEeeeccccccccCCCCCcchH
Q psy6508 117 KLAGLKQGVS-EKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEFKFAPFASQIRTGWLRDSEEK 192 (477)
Q Consensus 117 rl~~~dfG~~-~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~~~~Pf~~~~r~~~~~~~~~~ 192 (477)
|.+.+..|.. +.++|+.....|.|.+.+.+-.+--.-.++ -.+|++ .=.+-.|..|-..-.| ...+...+.
T Consensus 56 R~i~~etGklaRfAngsvvv~~GeT~Vm~Tv~~a~~PSp~qFlPL~VdYq----eK~aAvGRip~~fmRR-Eg~tkdkEi 130 (760)
T KOG1067|consen 56 REILFETGKLARFANGSVVVQMGETAVMTTVVLADKPSPPQFLPLVVDYQ----EKFAAVGRIPGNFMRR-EGRTKDKEI 130 (760)
T ss_pred eEEEEecchhhhhcCCcEEEccCCeEEEEEEEecCCCCccccceEEEehh----hhhhhhccCCCccccc-ccCCcchhh
Confidence 5555666654 568899999999999988764332111111 111110 0000012222221112 112223333
Q ss_pred HHHHHHHHHhhhhhhcccCCCCcccEEEEEEeCCCchH--HHHHHHHHHHHhhCCCCCCceEEEEEEEeeCCeEEeCCCh
Q psy6508 193 ELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSAL--SAAINCANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVE 270 (477)
Q Consensus 193 ~l~~~i~~~l~~~i~~~~~Pr~~i~i~v~vL~~dg~~~--~a~inaa~lAL~dagi~m~~~v~a~s~~~~~~~~~~Dp~~ 270 (477)
...+++.+.+.|...... ....++...+|..||-.. .-++|+++.||.-.-||....+.++-+++++|+.+++||.
T Consensus 131 L~~rLidrsirplfp~g~--~~etqi~~n~Ls~dG~~~pdvlainaas~Al~lsdvpw~gpig~vRigLi~Ge~vVNPT~ 208 (760)
T KOG1067|consen 131 LTGRLIDRPIRPLFPKGF--YHETQILCNVLSSDGVHDPDVLAINAASAALSLSDVPWNGPIGAVRIGLIDGEFVVNPTR 208 (760)
T ss_pred eeeeccccccccCCcccc--hhHHHHHhhheecccccCchHHHHhHHHHHhhhccCCCCCceeeeEeeeecceEEeCcch
Confidence 334555555544442222 234556678888888543 3479999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCCCceEEEEEccCCCcEEEEEEEee-ecHHHHHHHHHHHHhcccchhhH
Q psy6508 271 EEVAYCQSLSSSEDDDSGVITLSYMSVIQQVTQVTLVGT-IQQERLADHIEQLIGCCESLCTD 332 (477)
Q Consensus 271 ~E~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~g~-~~~~~~~~~l~~~~~~~~~i~~~ 332 (477)
.|.+. +.+.+.+....++++.++..+. +.++.|..++..+...+.++..-
T Consensus 209 kEmss------------S~Lnlvvagt~~~~vmle~~s~~i~qqdl~~Aikvg~~~~q~~i~~ 259 (760)
T KOG1067|consen 209 KEMSS------------SQLNLVVAGTKSQTVMLEGSSNNILQQDLLHAIKVGVKEAQQIIQG 259 (760)
T ss_pred hhhhh------------ccceeEEEeccceEEEEEcccccccHHHHHHHHHhccHHHHHHHHH
Confidence 99883 3444444455788888888765 67888899999888888877665
No 491
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.75 E-value=0.00049 Score=63.16 Aligned_cols=115 Identities=18% Similarity=0.342 Sum_probs=80.0
Q ss_pred CCcEEEEEEcccCC--------------CChhHHHHHHHHHHHHHhcC------CCCccceEEEEEeCCeEEEEEecCC-
Q psy6508 3 QHTEVAIKCIDKTK--------------VSENRFDSIVNEIKALKLLH------HQHIVTMLDFLWDERYVYIILEYCD- 61 (477)
Q Consensus 3 ~g~~vAiK~i~~~~--------------~~~~~~~~~~~E~~il~~l~------HpnIv~~~~~~~~~~~~~lv~e~~~- 61 (477)
+.....||++.... .......+..+|+.-...+. +.+|.+++|+.+++--..+|+|.+.
T Consensus 22 ~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d 101 (199)
T PF10707_consen 22 DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRD 101 (199)
T ss_pred CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEEC
Confidence 44556788887765 11122455667777666665 7899999999999888899999642
Q ss_pred -----CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCCCCceeecc---Ccceeeccc
Q psy6508 62 -----GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLAGLK 122 (477)
Q Consensus 62 -----g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~---~~~rl~~~d 122 (477)
..+|.++++.. .+++ .....+. +-.+||-+.+|+.+|++|.||++.. +..+++.+|
T Consensus 102 ~dG~~s~TL~~~l~~~-~~~~-~~~~~L~---~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 102 ADGNISPTLEDYLKEG-GLTE-ELRQALD---EFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred CCCCcCccHHHHHHcC-CccH-HHHHHHH---HHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence 26788888653 4665 4444333 3356788999999999999999953 233566555
No 492
>KOG0606|consensus
Probab=97.74 E-value=2.7e-06 Score=92.48 Aligned_cols=152 Identities=19% Similarity=0.195 Sum_probs=107.4
Q ss_pred HHHHHHHHhcCCCCccceEEEEEeCCeEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEccCC
Q psy6508 26 VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105 (477)
Q Consensus 26 ~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlk 105 (477)
..+-.++-..++|.+++..-.+......+|+++|..|++|...++.-+..+..-.+.....+.+++++||+..+.|||++
T Consensus 852 r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~ 931 (1205)
T KOG0606|consen 852 RSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLK 931 (1205)
T ss_pred CCccCccccCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhccccc
Confidence 33333333345566665554455667899999999999999999987778888888889999999999999999999999
Q ss_pred CCceeeccCcceeecccccc------eecccCC--------cc----------ccc-----CCeEEEeccccccccCCCC
Q psy6508 106 PQNILIKNNTLKLAGLKQGV------SEKAKGS--------AY----------IEQ-----GNTKVICSVFEPREIPSSK 156 (477)
Q Consensus 106 p~NIll~~~~~rl~~~dfG~------~~~~~gs--------~~----------~~~-----g~t~v~~~~y~ppE~~~~~ 156 (477)
|.|+++..+..+.. .+||. .....+. .+ ... ....++++-|.+||...+.
T Consensus 932 p~~~l~~~~gh~~l-~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~ 1010 (1205)
T KOG0606|consen 932 PDSLLIAYDGHRPL-TDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGR 1010 (1205)
T ss_pred ccchhhcccCCccc-CccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccc
Confidence 99999965433322 24431 1111111 00 001 1234567779999988776
Q ss_pred ---CcccccCcceEEEEEE--eeecccc
Q psy6508 157 ---TSLEYQRSKGELYVEF--KFAPFAS 179 (477)
Q Consensus 157 ---~~~Di~~s~G~il~e~--~~~Pf~~ 179 (477)
..+|+ |+.|+.++|. +..||..
T Consensus 1011 ~hgs~ad~-~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 1011 RHGSAADW-WSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCCCcchh-hhhhhhhhhhhcCCCCCCC
Confidence 77899 9999999998 5566663
No 493
>KOG2838|consensus
Probab=97.74 E-value=3.1e-05 Score=71.72 Aligned_cols=79 Identities=15% Similarity=0.187 Sum_probs=65.6
Q ss_pred ccccchhhHHhhhcCcceeEEEEecCccceeeEeeeehhhhcccHHHHHhcCCCccccCC----cccCCCCHHHHHHHhh
Q psy6508 341 HVTLPERGRYVLNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGD----TKILDITPEAFSTMLD 416 (477)
Q Consensus 341 ~~~l~~r~~~~~~~~~~~D~~~~v~~~~~~~~~~~hk~vLa~~S~~f~~~f~~~~~~~~~----~~~~~~~~~~~~~~l~ 416 (477)
.-++++.+...++...-+|+.+.... ..|+|||++||+|+|+|+-+.+++...... ++.-+++.+.|+++|.
T Consensus 114 a~sf~kD~ad~ye~k~c~dldiiFke----TcfpahRA~laaRCpffK~l~nsd~e~~ae~i~dik~ag~dm~~feafLh 189 (401)
T KOG2838|consen 114 ANSFLKDFADGYERKVCGDLDIIFKE----TCFPAHRAFLAARCPFFKILANSDEEPEAEDICDIKFAGFDMDAFEAFLH 189 (401)
T ss_pred hhHHHHHHhhhhheeeeccceeeeee----ccchHHHHHHHhhCcchhhhccCCCCcchhhhhhhhhhccChHHHHHHHH
Confidence 33466777777777888999999998 889999999999999999998877544333 3556899999999999
Q ss_pred hhhcCce
Q psy6508 417 SDHHARV 423 (477)
Q Consensus 417 ~~Ytg~~ 423 (477)
|.|||+-
T Consensus 190 ~l~tgEf 196 (401)
T KOG2838|consen 190 SLITGEF 196 (401)
T ss_pred HHHhccc
Confidence 9999985
No 494
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.72 E-value=0.00015 Score=75.87 Aligned_cols=101 Identities=15% Similarity=0.227 Sum_probs=64.9
Q ss_pred HHHHHHHHHhcC-----CCC--ccceEEEEEeCCeEEEEEecCCCCCHHHHH--HhCCCCCHHHHHHHHHHHHHHHHHHH
Q psy6508 25 IVNEIKALKLLH-----HQH--IVTMLDFLWDERYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLR 95 (477)
Q Consensus 25 ~~~E~~il~~l~-----Hpn--Iv~~~~~~~~~~~~~lv~e~~~g~sL~~~l--~~~~~l~~~~~~~i~~qi~~aL~~LH 95 (477)
+.+|...+.+++ .|+ |+++| ++-.+.-.|+|||++|-.+.+.. +. ..++.+.+.....++ -+..+-
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~--we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~--f~~q~~ 282 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVY--WEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRA--FLRQLL 282 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceee--hhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHH--HHHHHH
Confidence 556666666652 232 33333 23344568999999999888874 44 345544433322222 123334
Q ss_pred hCCcEEccCCCCceeeccCcceeecccccceecccC
Q psy6508 96 ENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKG 131 (477)
Q Consensus 96 ~~givHrDlkp~NIll~~~~~rl~~~dfG~~~~~~g 131 (477)
..|+.|.|.+|.||+++.+ .+++.+|||+....+.
T Consensus 283 ~dgffHaDpHpGNi~v~~~-g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 283 RDGFFHADPHPGNILVRSD-GRIVLLDFGIVGRLDP 317 (517)
T ss_pred hcCccccCCCccceEEecC-CcEEEEcCcceecCCH
Confidence 5899999999999999887 3777789999865543
No 495
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.68 E-value=0.00022 Score=66.65 Aligned_cols=120 Identities=16% Similarity=0.161 Sum_probs=82.0
Q ss_pred CCCcEEEEEEcccCCCChhH----------------------HHHHHHHHHHHHhcC--CCCccceEEEEEeCCeEEEEE
Q psy6508 2 EQHTEVAIKCIDKTKVSENR----------------------FDSIVNEIKALKLLH--HQHIVTMLDFLWDERYVYIIL 57 (477)
Q Consensus 2 ~~g~~vAiK~i~~~~~~~~~----------------------~~~~~~E~~il~~l~--HpnIv~~~~~~~~~~~~~lv~ 57 (477)
.++..||+|+.+.....-.. ..-..+|+..|+++. +-.+++-+.+.. -.|||
T Consensus 70 ~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~----nVLvM 145 (268)
T COG1718 70 GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRN----NVLVM 145 (268)
T ss_pred CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeecC----CeEEE
Confidence 35789999998765332111 112467899999883 566777776643 36999
Q ss_pred ecCCCC-CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEEccCCCCceeeccCcceeecccccceec
Q psy6508 58 EYCDGG-DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE-NNVCHFDLKPQNILIKNNTLKLAGLKQGVSEK 128 (477)
Q Consensus 58 e~~~g~-sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~rl~~~dfG~~~~ 128 (477)
||+... .-.-.|+.- .+...+...+..++++.+.-|-. .|+||+||..-|||+.++++.++ |+|-+..
T Consensus 146 EfIg~~g~pAP~LkDv-~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~~~p~iI--D~~QaV~ 215 (268)
T COG1718 146 EFIGDDGLPAPRLKDV-PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHDGEPYII--DVSQAVT 215 (268)
T ss_pred EeccCCCCCCCCcccC-CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEECCeEEEE--ECccccc
Confidence 998532 111112221 23344788889999999998877 89999999999999997766555 8886643
No 496
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.66 E-value=0.00054 Score=64.48 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=41.8
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcCCC--CccceEEEEEeCCeEEEEEecCCCCC
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQ--HIVTMLDFLWDERYVYIILEYCDGGD 64 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~Hp--nIv~~~~~~~~~~~~~lv~e~~~g~s 64 (477)
|..+++|...... ......+|.++++.+..- -+++.+++....+..+++||+++|.+
T Consensus 22 ~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 22 TGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred CCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 4467788765432 223468899999999533 35788888888888899999999863
No 497
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.49 E-value=0.00081 Score=63.93 Aligned_cols=60 Identities=12% Similarity=0.179 Sum_probs=44.1
Q ss_pred CcEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCccceEEEEEeCCeEEEEEecCCCCCHHHH
Q psy6508 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDGGDLCSF 68 (477)
Q Consensus 4 g~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~g~sL~~~ 68 (477)
+..+.+|...... ...+.+|+.+++.+. +--+++++++....+..++|||+++|.+|.+.
T Consensus 22 ~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 22 NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 3577888765432 234668999998883 45577888887776778999999998887754
No 498
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.41 E-value=7e-06 Score=89.79 Aligned_cols=78 Identities=15% Similarity=0.215 Sum_probs=53.4
Q ss_pred EEccCCCC-ceeeccCcceeecccccceecccCCcccccCCeEEEeccccccccCCCC---CcccccCcceEEEEEE--e
Q psy6508 100 CHFDLKPQ-NILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSK---TSLEYQRSKGELYVEF--K 173 (477)
Q Consensus 100 vHrDlkp~-NIll~~~~~rl~~~dfG~~~~~~gs~~~~~g~t~v~~~~y~ppE~~~~~---~~~Di~~s~G~il~e~--~ 173 (477)
-+++.+|. |++++... .....+||...............+.++|+.|++||++.+. .++|+ |++|+++||+ +
T Consensus 499 ~~~~~~p~~~~~~~p~~-~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~Di-wSlG~il~ElltG 576 (669)
T cd05610 499 PTQKPRPHGNLYQTPKQ-VKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDW-WALGVCLFEFLTG 576 (669)
T ss_pred CCCCCCCCCceeECCcc-ccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHH-HHHHHHHHHHHHC
Confidence 35666666 44555444 3345678876554332222233457899999999998766 67899 9999999999 6
Q ss_pred eecccc
Q psy6508 174 FAPFAS 179 (477)
Q Consensus 174 ~~Pf~~ 179 (477)
..||.+
T Consensus 577 ~~pf~~ 582 (669)
T cd05610 577 IPPFND 582 (669)
T ss_pred CCCCCC
Confidence 677763
No 499
>PLN02876 acyl-CoA dehydrogenase
Probab=97.24 E-value=0.0022 Score=71.99 Aligned_cols=60 Identities=17% Similarity=0.263 Sum_probs=41.9
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcC-CCCc--cceEEEEEeC---CeEEEEEecCCCCCH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHI--VTMLDFLWDE---RYVYIILEYCDGGDL 65 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnI--v~~~~~~~~~---~~~~lv~e~~~g~sL 65 (477)
..+++|+.+..... .....+.+|+.+|+.+. |+++ ++++.++.+. +..|+||||++|..+
T Consensus 66 ~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~ 131 (822)
T PLN02876 66 KRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF 131 (822)
T ss_pred eeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence 46778876543221 12346789999999995 6665 8888877654 467899999997643
No 500
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.20 E-value=0.0035 Score=58.48 Aligned_cols=59 Identities=19% Similarity=0.282 Sum_probs=41.0
Q ss_pred cEEEEEEcccCCCChhHHHHHHHHHHHHHhcCC--CCccceEEEEE---eCCeEEEEEecCCCCCHHH
Q psy6508 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH--QHIVTMLDFLW---DERYVYIILEYCDGGDLCS 67 (477)
Q Consensus 5 ~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H--pnIv~~~~~~~---~~~~~~lv~e~~~g~sL~~ 67 (477)
+.+++|..... .....+.+|..+++.+.. ..+++++.... .....+++|++++|.++..
T Consensus 21 ~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 21 GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD 84 (239)
T ss_dssp SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence 58899986433 345678899999998842 24677776443 3346799999999988877
Done!