RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6508
(477 letters)
>2nn6_F MTR3, exosome component 6; RNA, exosome, PM/SCL, phosphorolytic,
hydrolase/transferase complex; 3.35A {Homo sapiens}
SCOP: d.14.1.4 d.101.1.1
Length = 272
Score = 168 bits (427), Expect = 5e-49
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQR--------SKGELYVEF 172
+ G+ +AKGSAY+E G TKV+C+V PR+ + +G L +F
Sbjct: 41 ARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDF 100
Query: 173 KFAPFASQIRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSA 232
+ APFA + R EE+EL L+ ALEPAV + Q+++ L+L++ GSAL+A
Sbjct: 101 RRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAA 160
Query: 233 AINCANLALVDAAIPMYDLVTSSTLAL---RGGLTFIDPVEEEVAYCQSLSSSEDDDSGV 289
A+ A LAL DA + MYDLV L+L +DP E E+ +
Sbjct: 161 ALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLE----------EERAAAG 210
Query: 290 ITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTD 332
+T++ M V+ QV + G L + + + C
Sbjct: 211 LTVALMPVLNQVAGLLGSGEGG---LTESWAEAVRLGLEGCQR 250
>2wp8_B Exosome complex component SKI6; nucleus, hydrolase, RNA-binding,
exonucle binding, mitochondrion, rRNA processing; 3.00A
{Saccharomyces cerevisiae}
Length = 246
Score = 161 bits (410), Expect = 7e-47
Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 125 VSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTG 184
A GS+Y+EQGN K+I V P+E SK L V F+ R+
Sbjct: 32 HPHAADGSSYMEQGNNKIITLVKGPKEPRLKSQMDT---SKALLNVSVNINKFSKFERSK 88
Query: 185 WLR--DSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALV 242
+ E+ L R E V + + +D+ + VL+ DG + + IN LAL+
Sbjct: 89 SSHKNERRVLEIQTSLVRMFEKNVMLNIYPRTVIDIEIHVLEQDGGIMGSLINGITLALI 148
Query: 243 DAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQVT 302
DA I M+D ++ ++ L +D +S E++ +TL + ++++
Sbjct: 149 DAGISMFDYISGISVGLYDTTPLLD-----------TNSLEENAMSTVTLGVVGKSEKLS 197
Query: 303 QVTLVGTIQQERLADHIEQLIGCCESL 329
+ + I +RL + + I +
Sbjct: 198 LLLVEDKIPLDRLENVLAIGIAGAHRV 224
>3krn_A Protein C14A4.5, confirmed by transcript evidence; RNAse PH domain,
homodimer, exosome, cell-death-related DNAS hydrolase;
3.92A {Caenorhabditis elegans}
Length = 222
Score = 153 bits (388), Expect = 5e-44
Identities = 39/209 (18%), Positives = 71/209 (33%), Gaps = 21/209 (10%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQ 180
+ + A GSA QG T + S P ++ +SK S E + ++ +
Sbjct: 10 CELSFLKNADGSACFSQGATCIWASCSGPGDVHASKASDE------AMTLDISYRANCG- 62
Query: 181 IRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
D++ L N + L A+ F + + + V +Q+DGS + AIN A A
Sbjct: 63 -------DNKFNVLNNIIHSTLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFA 115
Query: 241 LVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVIQQ 300
L+D +P + + IDP ++ A +
Sbjct: 116 LLDNGMPFETVFCGVLIVRVKDELIIDPTAKQEAASTG-------RVLFSVCKGSDGHPE 168
Query: 301 VTQVTLVGTIQQERLADHIEQLIGCCESL 329
V + +G +L ++
Sbjct: 169 VCAMDAIGHWDFIQLEAAWSLAQPSASAI 197
>2nn6_D Exosome complex exonuclease RRP46; RNA, exosome, PM/SCL,
phosphorolytic, hydrolase/transferase complex; 3.35A
{Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Length = 237
Score = 152 bits (385), Expect = 2e-43
Identities = 47/224 (20%), Positives = 84/224 (37%), Gaps = 26/224 (11%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQ 180
+Q + + GSA QG+T V+ V+ P E+ SK E++ A
Sbjct: 35 CEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSK----------EIF---NKATLEVI 81
Query: 181 IRTG-WLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANL 239
+R L EK ++ E V + + + V+ + GS L+ +N A +
Sbjct: 82 LRPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACM 141
Query: 240 ALVDAAIPMYDLVTSSTLALRG-GLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSYMSVI 298
ALVDA +PM L AL G +DP ++ E + V+T + SV
Sbjct: 142 ALVDAGVPMRALFCGVACALDSDGTLVLDPTSKQ----------EKEARAVLTFALDSVE 191
Query: 299 QQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVSDHV 342
+++ + G L + + + ++ +
Sbjct: 192 RKLLMSSTKGLYSDTELQQCLAAAQAASQHVF-RFYRESLQRRY 234
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 141 bits (357), Expect = 3e-38
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 30 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 89
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 90 CG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 148
Query: 119 A 119
Sbjct: 149 I 149
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 140 bits (354), Expect = 5e-38
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL--HHQHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L H I+ + D+ ++Y+Y+++E
Sbjct: 49 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 108
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 109 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 167
Query: 119 A 119
Sbjct: 168 I 168
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 139 bits (352), Expect = 4e-37
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH--QHIVTMLDFLWDERYVYIILE 58
NE+ AIK ++ + DS NEI L L I+ + D+ ++Y+Y+++E
Sbjct: 77 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N LI + LKL
Sbjct: 137 CG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 195
Query: 119 A 119
Sbjct: 196 I 196
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 133 bits (336), Expect = 2e-35
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCD 61
AIK + D + E + LK L+H++IV + + R+ +I+E+C
Sbjct: 34 GDLFAIKVFNNISFLRPV-DVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92
Query: 62 GGDLCSFIRSHEK---LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-----KN 113
G L + + L E + +R +V + LREN + H ++KP NI+
Sbjct: 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152
Query: 114 NTLKLA 119
+ KL
Sbjct: 153 SVYKLT 158
>2wnr_B Probable exosome complex exonuclease 1; phosphate binding, 3'-5'
exoribonuclease, hydrolase; 2.65A {Methanothermobacter
thermautotrophicusorganism_taxid}
Length = 240
Score = 126 bits (319), Expect = 7e-34
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
G+ E+A GS+Y+E G K++ +V+ PRE K + + + APF+ + R
Sbjct: 34 GILERADGSSYLEFGGNKILVAVYGPREAQIRKLQRPD---RAVIRCRYNMAPFSVEERK 90
Query: 184 GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVD 243
D E+ AL PA+ +F +D+F+ VL+ +G A I A++AL D
Sbjct: 91 RPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGTRCAGITAASVALAD 150
Query: 244 AAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGV-ITLSYMSVIQQVT 302
A IPM D+V + G +D LS ED + + ++ + +++T
Sbjct: 151 AGIPMRDMVVACAAGKVGDQVVLD-----------LSEEEDKEGQADVPVAILPRTREIT 199
Query: 303 QVTLVGTIQQERLADHIEQ 321
+ G + E ++
Sbjct: 200 LLQSDGNLTPEEFERALDL 218
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 128 bits (324), Expect = 3e-33
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCDGG 63
AIK + D + E + LK L+H++IV + + R+ +I+E+C G
Sbjct: 36 LFAIKVFNNISFLRPV-DVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94
Query: 64 DLCSFIRSHEK---LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-----KNNT 115
L + + L E + +R +V + LREN + H ++KP NI+ +
Sbjct: 95 SLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSV 154
Query: 116 LKLA 119
KL
Sbjct: 155 YKLT 158
>2nn6_B Exosome complex exonuclease RRP41; RNA, exosome, PM/SCL,
phosphorolytic, hydrolase/transferase complex; 3.35A
{Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Length = 249
Score = 122 bits (309), Expect = 2e-32
Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
GV +A GSAYIEQGNTK + V+ P EI S+ R+ + ++ A F S
Sbjct: 34 GVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARALPDRAL--VNCQYSSATF-STGER 90
Query: 184 GWLR--DSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLAL 241
D + E+G L++ E A+ Q+D++V VLQ DG +A +N A LA+
Sbjct: 91 KRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLAV 150
Query: 242 VDAAIPMYDLVTSSTLALRGGLTFIDPVEEE 272
+DA IPM D V + + G D E
Sbjct: 151 LDAGIPMRDFVCACSAGFVDGTALADLSHVE 181
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 123 bits (311), Expect = 7e-32
Identities = 36/116 (31%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
EVAIK IDKT+++ + E++ +K+L+H +IV + + + E+ +Y+I+EY GG+
Sbjct: 41 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+ ++ +H ++ E + + RQ+V A+++ + + H DLK +N+L+ + +K+A
Sbjct: 101 VFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIA 156
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 120 bits (303), Expect = 4e-31
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 4 HTEVAIKCIDKTKVSENRF-DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
EVAIK IDK + + + NE+K L H I+ + ++ D YVY++LE C
Sbjct: 36 GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95
Query: 63 GDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
G++ ++++ K SE + + F+ Q++ + +L + + H DL N+L+ +N +K+A
Sbjct: 96 GEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIA 154
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 119 bits (301), Expect = 6e-31
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 7 VAIKCIDKTKVSENRF-DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+A+K + K ++ + + E++ L H +I+ + + D VY+ILEY G +
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
++ K E + ++ +L AL + V H D+KP+N+L+ LK+A
Sbjct: 97 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 120 bits (303), Expect = 1e-30
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
IK I+ +++S + E+ L + H +IV + + +YI+++YC+GGDL
Sbjct: 52 YVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLF 111
Query: 67 SFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQ 123
I + + E Q + Q+ LALK + + + H D+K QNI + K+ T++L
Sbjct: 112 KRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDF-- 169
Query: 124 GVS 126
G++
Sbjct: 170 GIA 172
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 120 bits (303), Expect = 2e-30
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S F + E + + L H +IV + D + +E + Y++ + GG+L
Sbjct: 56 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA-- 119
I + E SE ++Q++ ++ + N + H +LKP+N+L+ + +KLA
Sbjct: 116 FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF 175
Query: 120 GL 121
GL
Sbjct: 176 GL 177
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 124 bits (311), Expect = 2e-30
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDF------LWDERYVYIILE 58
+VAIK + +NR + EI+ +K L+H ++V+ + L + +E
Sbjct: 40 EQVAIKQCRQELSPKNR-ERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98
Query: 59 YCDGGDLCSFIRSHEK---LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN- 114
YC+GGDL ++ E L E + + + AL++L EN + H DLKP+NI+++
Sbjct: 99 YCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP 158
Query: 115 ---TLKLA 119
K+
Sbjct: 159 QRLIHKII 166
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 118 bits (298), Expect = 2e-30
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 6 EVAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
A K + K+ + + + EI + L HQH+V F D +V+++LE C
Sbjct: 42 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 101
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
L + + L+E + + ++RQ+VL ++L N V H DLK N+ + ++ +K+ GL
Sbjct: 102 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 118 bits (297), Expect = 3e-30
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 4 HTEVAIKCIDKTKVSENRF-DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+A+K + K+++ + + EI+ L H +I+ M ++ D + +Y++LE+
Sbjct: 39 KFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98
Query: 63 GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA-- 119
G+L ++ H + E + F+ +L AL + E V H D+KP+N+L+ LK+A
Sbjct: 99 GELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADF 158
Query: 120 GLKQGVSEKAKGSAYIEQGNTKVIC 144
G S + + +C
Sbjct: 159 GW----------SVHAPSLRRRTMC 173
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 118 bits (297), Expect = 3e-30
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A K I+ K+S F + E + + L H +IV + D + +E + Y++ + GG+L
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA-- 119
I + E SE ++Q++ ++ + N + H +LKP+N+L+ + +KLA
Sbjct: 93 FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF 152
Query: 120 GL 121
GL
Sbjct: 153 GL 154
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 118 bits (299), Expect = 3e-30
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 6 EVAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
A K + K+ + + + EI + L HQH+V F D +V+++LE C
Sbjct: 68 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 127
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
L + + L+E + + ++RQ+VL ++L N V H DLK N+ + ++ +K+ GL
Sbjct: 128 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187
Query: 122 KQGVSEKAKGSAYIEQGNT--KVIC 144
+ +E KV+C
Sbjct: 188 ----------ATKVEYDGERKKVLC 202
>2po1_A Probable exosome complex exonuclease 1; RNAse PH,
hydrolase/hydrolase/RNA complex; 1.94A {Pyrococcus
abyssi} PDB: 2po0_A* 2pnz_A 2po2_A*
Length = 249
Score = 116 bits (293), Expect = 4e-30
Identities = 55/149 (36%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
GV + A GSAYIE G K+I +V+ PRE+ + L V + APF+ + R
Sbjct: 34 GVLKNANGSAYIEWGKNKIIAAVYGPRELHPKHLQRPD---RAILRVRYNMAPFSVEERK 90
Query: 184 GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVD 243
D E+ +K ALEPA+ F +D+F+ VLQ D A I A+LAL D
Sbjct: 91 KPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALAD 150
Query: 244 AAIPMYDLVTSSTLALRGGLTFIDPVEEE 272
A IPM DLV + G +D +EE
Sbjct: 151 AGIPMRDLVAACAAGKIEGEIVLDLNKEE 179
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 118 bits (297), Expect = 7e-30
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 20/145 (13%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVN------EIKALKLLHHQHIVTMLDFLWDERYVYIILE 58
EV +K I K KV E+ + EI L + H +I+ +LD ++ + +++E
Sbjct: 50 KEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME 109
Query: 59 -YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTL 116
+ G DL +FI H +L E RQLV A+ +LR ++ H D+K +NI+I ++ T+
Sbjct: 110 KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTI 169
Query: 117 KLA--GLKQGVSEKAKGSAYIEQGN 139
KL G +AY+E+G
Sbjct: 170 KLIDFGS----------AAYLERGK 184
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 115 bits (291), Expect = 2e-29
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K ++S +R + I E+ L+ + H +I+T+ D ++ V +ILE
Sbjct: 32 EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 91
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E L+E + QF++Q++ + +L + HFDLKP+NI++ + + +
Sbjct: 92 GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 151
Query: 122 K 122
K
Sbjct: 152 K 152
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 116 bits (293), Expect = 2e-29
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ A K I K + +R + I E+ LK + H +++T+ + ++ V +ILE
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++ + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 122 K 122
K
Sbjct: 158 K 158
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 115 bits (291), Expect = 3e-29
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K + +R + I E+ L+ + H +++T+ D + V +ILE
Sbjct: 39 EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVS 98
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++ + + + +
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 122 K 122
K
Sbjct: 159 K 159
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 115 bits (290), Expect = 4e-29
Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 23/153 (15%)
Query: 5 TEVAIKCIDKTKVSENRFDS----IVNEIKALKLLH----HQHIVTMLDFLWDERYVYII 56
+VAIK I + +V S E+ L + H ++ +LD+ + ++
Sbjct: 57 LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV 116
Query: 57 LEY-CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--KN 113
LE DL +I L E + F Q+V A++ V H D+K +NILI +
Sbjct: 117 LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRR 176
Query: 114 NTLKLA--GLKQGVSEKAKGSAYIEQGNTKVIC 144
KL G A +
Sbjct: 177 GCAKLIDFGS----------GALLHDEPYTDFD 199
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 115 bits (291), Expect = 7e-29
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 6 EVAIKCIDKTKVSENRF----DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
E A K I K + +R + I E+ L+ + H +I+T+ D + V +ILE
Sbjct: 39 EYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVS 98
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGL 121
GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++ + + + +
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 122 K 122
K
Sbjct: 159 K 159
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 117 bits (294), Expect = 1e-28
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A I+ K+S + E + +LL H +IV + D + +E + Y+I + GG+L
Sbjct: 38 EYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 97
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA-- 119
I + E SE ++Q++ A+ + V H +LKP+N+L+ + +KLA
Sbjct: 98 FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADF 157
Query: 120 GL 121
GL
Sbjct: 158 GL 159
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 117 bits (294), Expect = 2e-28
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E AIK I KT VS + ++ E+ LKLL H +I+ + DF D+R Y+++E GG+L
Sbjct: 64 ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL 123
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA 119
I K +E ++Q++ + +L ++N+ H DLKP+N+L+++ +K+
Sbjct: 124 FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIV 181
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 116 bits (293), Expect = 2e-28
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A+K I+K +I+ E++ LK L H +I+ + + L D YI+ E GG+L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA 119
I ++ SE + ++Q+ + ++ ++N+ H DLKP+NIL+++ +K+
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII 166
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 115 bits (290), Expect = 2e-28
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 13/128 (10%)
Query: 6 EVAIKCIDKTKVS------ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+VAI+ I K K + + ++ EI+ LK L+H I+ + +F +D YI+LE
Sbjct: 162 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLEL 220
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----T 115
+GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+ +
Sbjct: 221 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL 280
Query: 116 LKLA--GL 121
+K+ G
Sbjct: 281 IKITDFGH 288
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 112 bits (283), Expect = 2e-28
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E A+K I+K +I+ E++ LK L H +I+ + + L D YI+ E GG+L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA 119
I ++ SE + ++Q+ + ++ ++N+ H DLKP+NIL+++ +K+
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII 166
>3hkm_A OS03G0854200 protein; RNAse PH domain, phosphorylase, hydrolase;
1.98A {Oryza sativa japonica group}
Length = 246
Score = 111 bits (279), Expect = 3e-28
Identities = 48/207 (23%), Positives = 77/207 (37%), Gaps = 19/207 (9%)
Query: 122 KQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQI 181
+ ++A GSA QG+T V+ +V+ P+ + E K + V +K
Sbjct: 20 TRNPLDRAHGSARWAQGDTIVLAAVYGPKPGTRKGENPE----KASIEVVWKPMTGQIGK 75
Query: 182 RTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLAL 241
+ EKE LKR L+ N + + V+ NDGS L AIN AL
Sbjct: 76 Q--------EKEYEMTLKRTLQSICLLTVHPNTTTSVILQVVGNDGSLLPCAINACCAAL 127
Query: 242 VDAAIPMYDLVTSSTLAL-RGGLTFIDPVEEEVAYCQSL------SSSEDDDSGVITLSY 294
V A IP+ L + + G +D + E +S +S + S
Sbjct: 128 VFAGIPLKHLAVAIGCGVLEDGEVILDTNKAEEQQLKSFAHLVFPNSRKSASSKEPNQKE 187
Query: 295 MSVIQQVTQVTLVGTIQQERLADHIEQ 321
+ + G + +E IE+
Sbjct: 188 EDSERGLITSITHGVMSEEDYFSCIER 214
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 112 bits (282), Expect = 3e-28
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A K I K V + D EI+ +K L H +I+ + + D +Y+++E C GG+L
Sbjct: 36 RRAAKKIPKYFVED--VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA-- 119
+ E + ++ ++ A+ + + NV H DLKP+N L + LKL
Sbjct: 94 FERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDF 153
Query: 120 GL 121
GL
Sbjct: 154 GL 155
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 111 bits (280), Expect = 5e-28
Identities = 34/116 (29%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K +++ K+ S + I EI+ LKL H HI+ + + ++++EY GG+
Sbjct: 38 KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
L +I H ++ E + ++ +Q++ A+ + + V H DLKP+N+L+ + K+A
Sbjct: 98 LFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 153
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 112 bits (282), Expect = 5e-28
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-------------Y 52
AIK I T+ +I++E+ L L+HQ++V + R
Sbjct: 33 YYAIKKIRHTEEKL---STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89
Query: 53 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
++I +EYC+ G L I S + + RQ++ AL ++ + H DLKP NI I
Sbjct: 90 LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149
Query: 112 -KNNTLKLA--GL 121
++ +K+ GL
Sbjct: 150 DESRNVKIGDFGL 162
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 112 bits (282), Expect = 5e-28
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A+KCI K+ + S+ NEI LK + H++IVT+ D + Y++++ GG+L
Sbjct: 36 LFALKCIKKSPAFRD--SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA-- 119
I +E ++Q++ A+K+L EN + H DLKP+N+L + +
Sbjct: 94 FDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDF 153
Query: 120 GLKQGVSEKAKGSAYIEQGNTKVIC 144
GL S + G C
Sbjct: 154 GL----------SKMEQNGIMSTAC 168
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 113 bits (284), Expect = 5e-28
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 6 EVAIKCIDKTKVSENR---FDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+ A+K +D K + + + + E +L H HIV +L+ + +Y++ E+ DG
Sbjct: 51 QFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG 110
Query: 63 GDLCSFI----RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN---- 114
DLC I + SE ++RQ++ AL++ +NN+ H D+KP +L+ +
Sbjct: 111 ADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSA 170
Query: 115 TLKLA 119
+KL
Sbjct: 171 PVKLG 175
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 112 bits (281), Expect = 9e-28
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 21/151 (13%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVN----EIKALKLLHHQ--HIVTMLDFLWDERYVYIILE 58
VAIK ++K ++S+ E+ LK + ++ +LD+ +ILE
Sbjct: 69 LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 128
Query: 59 YCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-- 115
+ DL FI L E + F Q++ A++ V H D+K +NILI N
Sbjct: 129 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 188
Query: 116 LKLA--GLKQGVSEKAKGSAYIEQGNTKVIC 144
LKL G A ++
Sbjct: 189 LKLIDFGS----------GALLKDTVYTDFD 209
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 111 bits (279), Expect = 1e-27
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
E IK I+K + + I EI+ LK L H +I+ + + D +YI++E C+GG+L
Sbjct: 49 ERVIKTINKDRSQVPM-EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL 107
Query: 66 ----CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLK 117
S + LSE + ++Q++ AL + +V H DLKP+NIL ++ +K
Sbjct: 108 LERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIK 167
Query: 118 LA--GL 121
+ GL
Sbjct: 168 IIDFGL 173
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 114 bits (286), Expect = 2e-27
Identities = 35/119 (29%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A+K I K +V + +S++ E++ LK L H +I+ + +F D+ Y Y++ E GG+
Sbjct: 53 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE 112
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA 119
L I S ++ SE + +RQ++ + ++ +N + H DLKP+N+L+++ +++
Sbjct: 113 LFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 171
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 111 bits (279), Expect = 2e-27
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 13/128 (10%)
Query: 6 EVAIKCIDKTKVS------ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+VAIK I K K + + ++ EI+ LK L+H I+ + +F +D YI+LE
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLEL 95
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----T 115
+GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+ +
Sbjct: 96 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL 155
Query: 116 LKLA--GL 121
+K+ G
Sbjct: 156 IKITDFGH 163
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 109 bits (276), Expect = 2e-27
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 AVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 110 bits (278), Expect = 2e-27
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A K + K + ++ I++EI L+L ++ + + + + +ILEY GG+
Sbjct: 56 EYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGE 115
Query: 65 LCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT----LKL 118
+ S E +SE + ++Q++ + +L +NN+ H DLKPQNIL+ + +K+
Sbjct: 116 IFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKI 175
Query: 119 A--GLKQGVSEKAKGSAYIEQGNT-KVIC 144
G+ S I + I
Sbjct: 176 VDFGM----------SRKIGHACELREIM 194
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 110 bits (278), Expect = 3e-27
Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 37/170 (21%)
Query: 2 EQHTEVAIKCIDKTKV---------------SENRFDSIVNEIKALKLLHHQHIVTMLDF 46
+ + A+K +K+ + ++++D NE++ + + +++ +T
Sbjct: 52 KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111
Query: 47 LWDERYVYIILEYCDGGDLCSFIRSHEKL--------SEFQCQQFVRQLVLALKFL-REN 97
+ + VYII EY + + F L + ++ ++ + ++ E
Sbjct: 112 ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK 171
Query: 98 NVCHFDLKPQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVIC 144
N+CH D+KP NIL+ KN +KL+ G S Y+ K
Sbjct: 172 NICHRDVKPSNILMDKNGRVKLSDFGE----------SEYMVDKKIKGSR 211
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 108 bits (273), Expect = 5e-27
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER--YVYIILEYCDGGD 64
+ K +D ++E +V+E+ L+ L H +IV D + D +YI++EYC+GGD
Sbjct: 34 LVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD 93
Query: 65 LCSFIRSHEK----LSEFQCQQFVRQLVLALKFL-----RENNVCHFDLKPQNILI-KNN 114
L S I K L E + + QL LALK + V H DLKP N+ +
Sbjct: 94 LASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ 153
Query: 115 TLKLA 119
+KL
Sbjct: 154 NVKLG 158
>3b4t_A Ribonuclease PH; RNAse, tRNA nucleotidyltransferase, RPHA, STRU
genomics, TBSGC; 2.10A {Mycobacterium tuberculosis}
Length = 262
Score = 108 bits (271), Expect = 5e-27
Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 35/235 (14%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQ 180
+ +G +E GS IE G+TKV+C+ +P + + G L E+ P A+
Sbjct: 21 ITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATG----LGWLTAEYAMLPSATH 76
Query: 181 IRTG-----WLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAIN 235
R+ +E+ + R+L + + + VLQ DG +AAI
Sbjct: 77 SRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAIT 136
Query: 236 CANLALVDAAIPMYDLVTSSTLALRGGLTFIDPVEEEVAYCQSLSSSEDDDSGVITLSY- 294
A +AL DA L+ G L+ P+ +A S D + L Y
Sbjct: 137 GAYVALADAVTY---------LSAAGKLSDPRPLSCAIAAV---SVGVVDGRIRVDLPYE 184
Query: 295 --------MSVIQQVT-QVTLV-GTIQQERLA-DHIEQLIGCCESLCTD--RVQK 336
M+V+ T + + GT + A +++L+ C Q+
Sbjct: 185 EDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQR 239
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 109 bits (275), Expect = 5e-27
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 7 VAIKCIDKTKVSENRF-DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + + + + + EI LK L+H +++ ++ + I+LE D GDL
Sbjct: 60 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119
Query: 66 CSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I+ +K + E ++ QL AL+ + V H D+KP N+ I +KL
Sbjct: 120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLG 178
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 108 bits (271), Expect = 1e-26
Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 25/133 (18%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--------------- 50
IK + + E+KAL L H +IV
Sbjct: 38 TYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91
Query: 51 -RYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 107
+ ++I +E+CD G L +I R EKL + + Q+ + ++ + + DLKP
Sbjct: 92 TKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPS 151
Query: 108 NILI-KNNTLKLA 119
NI + +K+
Sbjct: 152 NIFLVDTKQVKIG 164
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 108 bits (272), Expect = 1e-26
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K +D + + ++I EI K+L+H+++V + Y+ LEYC GG+L
Sbjct: 34 AVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
I + E Q+F QL+ + +L + H D+KP+N+L+ + + LK++
Sbjct: 93 FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 107 bits (269), Expect = 3e-26
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 6 EVAIKCIDKTKVS-------ENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIIL 57
E A+K ID T + ++ + E+ L+ + H +I+ + D + +++
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 58 EYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
+ G+L ++ LSE + ++ +R L+ + L + N+ H DLKP+NIL+ ++ +
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI 163
Query: 117 KLA--GL 121
KL G
Sbjct: 164 KLTDFGF 170
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 106 bits (267), Expect = 3e-26
Identities = 35/117 (29%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Query: 5 TEVAIKCIDKTKVSENRF-DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+VA+K I+K ++++ I EI L+LL H HI+ + D + + + +++EY G
Sbjct: 39 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+L +I +K+SE + ++F +Q++ A+++ + + H DLKP+N+L+ ++ +K+A
Sbjct: 98 ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIA 154
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 107 bits (269), Expect = 4e-26
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
K + + + EI L + H++I+ + + + +I E+ G D+
Sbjct: 32 TYMAKFVKVKGTDQ---VLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88
Query: 66 CSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI---KNNTLKLA-- 119
I + +L+E + +V Q+ AL+FL +N+ HFD++P+NI+ +++T+K+
Sbjct: 89 FERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEF 148
Query: 120 GL 121
G
Sbjct: 149 GQ 150
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 109 bits (275), Expect = 4e-26
Identities = 33/116 (28%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Query: 6 EVAIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K +++ K+ S + I EI+ LKL H HI+ + + +++++EY GG+
Sbjct: 43 KVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGE 102
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
L +I + +L E + ++ +Q++ + + + V H DLKP+N+L+ + K+A
Sbjct: 103 LFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 158
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 106 bits (268), Expect = 4e-26
Identities = 32/121 (26%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 6 EVAIKCIDKTKVS--ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDE--RYVYIILEYCD 61
A+K + K K+ N ++ EI+ L+ L H++++ ++D L++E + +Y+++EYC
Sbjct: 32 RRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCV 91
Query: 62 GG--DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
G ++ + ++ Q + QL+ L++L + H D+KP N+L+ TLK+
Sbjct: 92 CGMQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKI 150
Query: 119 A 119
+
Sbjct: 151 S 151
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 109 bits (274), Expect = 6e-26
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 15/129 (11%)
Query: 6 EVAIKCIDKTKVS-----------ENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVY 54
E AIK I K++ E + I NEI LK L H +I+ + D D++Y Y
Sbjct: 63 EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFY 122
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
++ E+ +GG+L I + K E ++Q++ + +L ++N+ H D+KP+NIL++N
Sbjct: 123 LVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK 182
Query: 115 ----TLKLA 119
+K+
Sbjct: 183 NSLLNIKIV 191
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 106 bits (267), Expect = 7e-26
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 11/125 (8%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER----YVYIILEY 59
A+K I + + E +L +H +I+ ++ + ER +++L +
Sbjct: 54 GHFYALKRILCHEQQDRE--EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPF 111
Query: 60 CDGGDLCSFI----RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNN 114
G L + I L+E Q + + L+ + H DLKP NIL+
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
Query: 115 TLKLA 119
L
Sbjct: 172 QPVLM 176
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 105 bits (265), Expect = 7e-26
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
AIK K + + E+ A L H H+V ++ ++ I EYC+GG L
Sbjct: 39 YAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 98
Query: 66 CSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
I + + E + + + Q+ L+++ ++ H D+KP NI I
Sbjct: 99 ADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT 151
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 107 bits (269), Expect = 8e-26
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 10/126 (7%)
Query: 6 EVAIKCIDKTKVS------ENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILE 58
E A+K ++ T E ++ E L+ + H HI+T++D +++++ +
Sbjct: 121 EFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFD 180
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLK 117
G+L ++ LSE + + +R L+ A+ FL NN+ H DLKP+NIL+ +N ++
Sbjct: 181 LMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIR 240
Query: 118 LA--GL 121
L+ G
Sbjct: 241 LSDFGF 246
>1r6l_A Ribonuclease PH; beta-alpha-beta-alpha fold, hexamer, phosphate
bound, transf; HET: NHE; 1.90A {Pseudomonas aeruginosa}
SCOP: d.14.1.4 d.101.1.1 PDB: 1r6m_A
Length = 239
Score = 104 bits (261), Expect = 8e-26
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQ 180
+ + ++ A+GS +E G+TKVIC+V +P + +G L E+ P ++
Sbjct: 17 ITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLKG----QGQGWLTAEYGMLPRSTG 72
Query: 181 IRT-----GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAIN 235
R + E+ + R+L A+ + + + V+Q DG +A+I
Sbjct: 73 ERNQREASRGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASIT 132
Query: 236 CANLALVDA-----------AIPMYDLVTSSTLALRGGLTFIDPVEEE 272
A +AL+DA P+ +V + ++ + G+ +D E
Sbjct: 133 GATVALIDALAVLKKRGALKGNPLKQMVAAVSVGIYQGVPVLDLDYLE 180
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 109 bits (274), Expect = 9e-26
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A K + S+ +++ EI+ + +L H +V + D D+ + +I E+ GG+L
Sbjct: 184 NFAAKFVMTPHESD--KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241
Query: 66 CSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLA-- 119
+ H K+SE + +++RQ+ L + ENN H DLKP+NI+ N LKL
Sbjct: 242 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF 301
Query: 120 GL 121
GL
Sbjct: 302 GL 303
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 106 bits (267), Expect = 9e-26
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A+K + KT + + EI L L H +I+ + + + ++LE GG+L
Sbjct: 80 PYALKVLKKTVDKK----IVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL 135
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA-- 119
I SE V+Q++ A+ +L EN + H DLKP+N+L LK+A
Sbjct: 136 FDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADF 195
Query: 120 GL 121
GL
Sbjct: 196 GL 197
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 107 bits (268), Expect = 1e-25
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
++A K I + + + + NEI + L H +++ + D + + +++EY DGG+L
Sbjct: 116 KLAAKIIKTRGMKDK--EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 66 CSF---IRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLA 119
F I L+E F++Q+ ++ + + + H DLKP+NIL N +K+
Sbjct: 174 --FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKII 231
Query: 120 --GL 121
GL
Sbjct: 232 DFGL 235
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 107 bits (268), Expect = 1e-25
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
K I+ + ++ NEI + LHH ++ + D D+ + +ILE+ GG+L
Sbjct: 78 VFVAKFINTPYPLD--KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135
Query: 66 CSF---IRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI---KNNTLKLA 119
F K+SE + ++RQ LK + E+++ H D+KP+NI+ K +++K+
Sbjct: 136 --FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKII 193
Query: 120 --GL 121
GL
Sbjct: 194 DFGL 197
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 105 bits (265), Expect = 2e-25
Identities = 34/117 (29%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 5 TEVAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+VA+K I + + ++ + EI LKLL H HI+ + D + + +++EY GG
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GG 93
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+L +I ++++E + ++F +Q++ A+++ + + H DLKP+N+L+ N +K+A
Sbjct: 94 ELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIA 150
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 104 bits (262), Expect = 2e-25
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 4/116 (3%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A+K + E+ + K+ H V + + +Y+ E C G L
Sbjct: 85 YAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSL 143
Query: 66 CSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
L E Q ++R +LAL L + H D+KP NI + KL
Sbjct: 144 QQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLG 199
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 103 bits (258), Expect = 7e-25
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER------------YVY 54
AIK I R + ++ E+KAL L H IV + ++ Y+Y
Sbjct: 33 YAIKRIRLPNRELAR-EKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLY 91
Query: 55 IILEYCDGGDLCSFIRSHEKLSEF---QCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
I ++ C +L ++ + E C Q+ A++FL + H DLKP NI
Sbjct: 92 IQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF 151
Query: 112 -KNNTLKL 118
++ +K+
Sbjct: 152 TMDDVVKV 159
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 103 bits (258), Expect = 7e-25
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 30/156 (19%)
Query: 4 HTEVAIKCIDKTKV------------------------SENRFDSIVNEIKALKLLHHQH 39
+T A+K + K K+ + + EI LK L H +
Sbjct: 38 NTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97
Query: 40 IVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 97
+V +++ L D E ++Y++ E + G + + + + LSE Q + + + L+ +++L
Sbjct: 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLKPLSEDQARFYFQDLIKGIEYLHYQ 156
Query: 98 NVCHFDLKPQNILI-KNNTLKLAGLKQGVSEKAKGS 132
+ H D+KP N+L+ ++ +K+A GVS + KGS
Sbjct: 157 KIIHRDIKPSNLLVGEDGHIKIADF--GVSNEFKGS 190
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 103 bits (258), Expect = 1e-24
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 7 VAIKCIDKTKVSENRFDSIVN-----EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
VAIK K E+ D ++ EI+ LK L H ++V +L+ +R ++++ EYCD
Sbjct: 31 VAIK-----KFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD 85
Query: 62 GGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+ + +++ + E + Q + A+ F ++N H D+KP+NILI K++ +KL
Sbjct: 86 H-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLC 144
Query: 120 --GL 121
G
Sbjct: 145 DFGF 148
>1udn_A Ribonuclease PH, RNAse PH; transferase, riken structural
genomics/proteomics initiative structural genomics;
2.30A {Aquifex aeolicus} SCOP: d.14.1.4 d.101.1.1 PDB:
1udq_A 1uds_A 1udo_A
Length = 255
Score = 100 bits (252), Expect = 2e-24
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
E +GS I G TKVIC+ +P+ + +G + E+ P A+Q RT
Sbjct: 19 DFLEYPEGSCLISFGKTKVICTASVIENVPNWLK----GKGQGWITAEYSMLPRATQQRT 74
Query: 184 -----GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCAN 238
E+ + RA+ AV + + + V+Q DG +AAI A
Sbjct: 75 IRESVQGRIGGRTHEIQRMIGRAMRTAVELTKIGERTIWVDCDVIQADGGTRTAAITGAF 134
Query: 239 LALVDAAIPMYDLVTSSTLALRG 261
+A+ DA I ++ ++
Sbjct: 135 VAVADAIIKLHKEGIIEETPIKD 157
>2je6_B RRP41, exosome complex exonuclease 1; nuclease, hydrolase,
exonuclease, phosphorolytic, exoribonuclease, RNA
degradation; HET: 1PE; 1.6A {Sulfolobus solfataricus}
SCOP: d.14.1.4 d.101.1.1 PDB: 2jea_B* 2jeb_B* 2br2_B
2c37_B* 2c38_B* 2c39_B* 3l7z_B
Length = 250
Score = 100 bits (252), Expect = 2e-24
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
GV + A GSA E GNTK I +V+ P+E+ SL + L V + PF++ R
Sbjct: 38 GVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPD---RAVLRVRYHMTPFSTDERK 94
Query: 184 GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLALVD 243
E EL ++ ALE AV F +D+F +LQ D + ++ A+LAL D
Sbjct: 95 NPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALAD 154
Query: 244 AAIPMYDLVTSSTLALRGGLTFIDPVEEE 272
A IPM DL+ + G+ +D E E
Sbjct: 155 AGIPMRDLIAGVAVGKADGVIILDLNETE 183
>3m7n_D Probable exosome complex exonuclease 1; exosome, RNA, exonuclease,
hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus
fulgidus} PDB: 3m85_D 2ba0_F 2ba1_E
Length = 258
Score = 100 bits (252), Expect = 2e-24
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFA--SQI 181
V ++A GS Y+E G KVI +VF PRE+ K + + APF+ +
Sbjct: 34 SVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPS---KAIIRYRYNMAPFSVEERK 90
Query: 182 RTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLAL 241
R G R E+ K A E + + F +D+FV VLQ D + +A +N A++AL
Sbjct: 91 RPGPDR--RSIEISKVSKEAFEAVIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVAL 148
Query: 242 VDAAIPMYDLVTSSTLALRGGLTFIDPVEEE 272
VDA +PM ++TS + G +DP++EE
Sbjct: 149 VDAGVPMKGMITSVAVGKADGQLVLDPMKEE 179
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 102 bits (256), Expect = 2e-24
Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 48/185 (25%)
Query: 6 EVAIKCIDKTKV---SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
AIK ++K K+ + + I E++ +K LHH +I + + DE+Y+ +++E C G
Sbjct: 53 IRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHG 112
Query: 63 GDLCSFIRSHEK----------------------------------------LSEFQCQQ 82
G L + E
Sbjct: 113 GHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN 172
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILI---KNNTLKLAGLKQGVSEKAKGSAYIEQGN 139
+RQ+ AL +L +CH D+KP+N L K+ +KL G+S++ E
Sbjct: 173 IMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDF--GLSKEFYKLNNGEYYG 230
Query: 140 TKVIC 144
Sbjct: 231 MTTKA 235
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 102 bits (257), Expect = 3e-24
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
VA+K I++ + + EI + L H +IV + + ++ II+EY GG+
Sbjct: 46 ELVAVKYIERGAAIDEN---VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGE 102
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI---KNNTLKLA 119
L I + + SE + + F +QL+ + + +CH DLK +N L+ LK+
Sbjct: 103 LYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKIC 160
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 102 bits (257), Expect = 4e-24
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 19/126 (15%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEY 59
EVAIK + + K +NR E++ ++++ H ++V + F + DE ++ ++LEY
Sbjct: 66 EVAIKKVLQDKRFKNR------ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119
Query: 60 CDGGDLCSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--KN 113
+ R + K + + ++ QL+ +L ++ +CH D+KPQN+L+ +
Sbjct: 120 VPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPS 178
Query: 114 NTLKLA 119
LKL
Sbjct: 179 GVLKLI 184
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 101 bits (255), Expect = 4e-24
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A+K IDK+K EI+ L + H +I+T+ D D +YVY++ E GG+
Sbjct: 49 EFAVKIIDKSKRDPTE------EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLK 122
L I + SE + + + +++L V H DLKP NIL + + ++
Sbjct: 103 LLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR 160
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 100 bits (250), Expect = 1e-23
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
E A+K I+K + E++ L H++++ +++F +E Y++ E GG
Sbjct: 40 EYAVKIIEKQPGHIR--SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA 119
+ S I +E + V+ + AL FL + H DLKP+NIL ++ +K+
Sbjct: 98 ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKIC 156
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 101 bits (252), Expect = 3e-23
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
VA+K + D + EIK L + H +++ +R++YI LE C +
Sbjct: 41 PVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLN 94
Query: 65 LCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
L + S + E+ +RQ+ + L + H DLKPQNIL+
Sbjct: 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 99.2 bits (248), Expect = 3e-23
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Query: 7 VAIKCIDKTKVSENRFDSIVN-----EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
VAIK K E+ D +V EIK LK L H+++V +L+ ++ Y++ E+ D
Sbjct: 53 VAIK-----KFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVD 107
Query: 62 GGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+ + L Q+++ Q++ + F +N+ H D+KP+NIL+ ++ +KL
Sbjct: 108 H-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLC 166
Query: 120 --GL 121
G
Sbjct: 167 DFGF 170
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 98.1 bits (245), Expect = 4e-23
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
+AIK I + + EI K L H++IV L + ++ I +E GG L
Sbjct: 50 IAIKEIPERDSRY--SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107
Query: 67 SFIRSHE---KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--KNNTLKLA 119
+ +RS K +E + +Q++ LK+L +N + H D+K N+LI + LK++
Sbjct: 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKIS 165
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 98.9 bits (247), Expect = 4e-23
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYCDGGD 64
A+K I K + EI ALKL H +IV + + D+ + ++++E +GG+
Sbjct: 38 AFAVKIISKRME-----ANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TLKLA 119
L I+ + SE + +R+LV A+ + + V H DLKP+N+L + +K+
Sbjct: 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKII 151
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 100 bits (250), Expect = 4e-23
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+K I F E++ L+ H +++ D ++ YI +E C
Sbjct: 50 DVAVKRILPEC-----FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AAT 103
Query: 65 LCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
L ++ + + ++Q L L N+ H DLKP NILI
Sbjct: 104 LQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP 154
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 97.9 bits (244), Expect = 1e-22
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+ A+K + E+ A L IV + + + +V I +E +GG L
Sbjct: 85 QCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN--TLKLA 119
I+ L E + ++ Q + L++L + H D+K N+L+ ++ L
Sbjct: 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALC 193
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 96.6 bits (241), Expect = 1e-22
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVT----MLDFLWDERYVYIILEYCD 61
EVA + K++++ E + LK L H +IV + ++ + ++ E
Sbjct: 53 EVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMT 112
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN--VCHFDLKPQNILI--KNNTLK 117
G L ++++ + + + + RQ++ L+FL + H DLK NI I ++K
Sbjct: 113 SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVK 172
Query: 118 LA 119
+
Sbjct: 173 IG 174
>3dd6_A Ribonuclease PH; exoribonuclease, tRNA maturation, RNAse PH.,
transferase; 1.70A {Bacillus anthracis}
Length = 255
Score = 94.7 bits (236), Expect = 3e-22
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 20/145 (13%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
+ +GS IE G+TKVICS +P KG + E+ P A++ RT
Sbjct: 29 NYLKHPEGSVLIEVGDTKVICSATIEERVPPFMR----GEGKGWVTAEYAMIPRATEQRT 84
Query: 184 -----GWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCAN 238
E+ + RAL V V + V+Q DG +A+I A
Sbjct: 85 IRESSKGKVTGRTMEIQRLIGRALRAVVDLEALGERTVWIDCDVIQADGGTRTASITGAY 144
Query: 239 LALVD-----------AAIPMYDLV 252
+A+V + IP+ D +
Sbjct: 145 VAMVLAFEKLLQAEKVSKIPVKDYL 169
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 97.9 bits (244), Expect = 3e-22
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW------DERYVYIILEYC 60
VAIK + + K +NR E++ ++ L H +IV + F + DE Y+ ++L+Y
Sbjct: 82 VAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135
Query: 61 DGGDLCSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT- 115
+ R + + L + ++ QL +L ++ +CH D+KPQN+L+ +T
Sbjct: 136 PE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 194
Query: 116 -LKLA 119
LKL
Sbjct: 195 VLKLC 199
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 94.1 bits (235), Expect = 9e-22
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 7 VAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A+K I + + + S + EI LK L H +IV + D + ++ + ++ E+ D DL
Sbjct: 29 FALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL 86
Query: 66 CSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
+ L + F+ QL+ + + + V H DLKPQN+LI + LK+A GL
Sbjct: 87 KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGL 146
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 94.5 bits (236), Expect = 9e-22
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 7 VAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K I + + S + EI LK LHH +IV+++D + ER + ++ E+ + DL
Sbjct: 48 VALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DL 105
Query: 66 CSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
+ + L + Q + ++ QL+ + ++ + H DLKPQN+LI + LKLA GL
Sbjct: 106 KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 94.1 bits (235), Expect = 1e-21
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVR 85
EI LK L+H +IV +LD + E +Y++ E+ DL F+ + + + ++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 86 QLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
QL+ L F + V H DLKPQN+LI +KLA GL
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 96.4 bits (240), Expect = 1e-21
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLDFLWDERY-----V 53
+ VAIK I +V E+ D I+ EI L L+H H+V +LD + + +
Sbjct: 75 KLEKRVVAIKKI--LRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132
Query: 54 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-K 112
Y++LE D D R+ L+E + + L++ +K++ + H DLKP N L+ +
Sbjct: 133 YVVLEIADS-DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQ 191
Query: 113 NNTLKLA--GLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSL-EY 161
+ ++K+ GL + V G++ + + ++ + K L +
Sbjct: 192 DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGH 243
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 94.1 bits (235), Expect = 1e-21
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 7 VAIKCIDKTKVSENRFDS-IVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
VA+K + + + S + EI LK L H++IV + D L ++ + ++ E+CD DL
Sbjct: 30 VALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DL 87
Query: 66 CSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
+ S L + F+ QL+ L F NV H DLKPQN+LI +N LKLA GL
Sbjct: 88 KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGL 147
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 94.2 bits (235), Expect = 2e-21
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 7 VAIKCIDKTKVSENRFDSI----VNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
VAIK I K D I + EIK L+ L H +I+ +LD + + ++ ++ +
Sbjct: 38 VAIKKI-KLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET 96
Query: 63 GDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA- 119
DL I+ + L+ + ++ + L++L ++ + H DLKP N+L+ +N LKLA
Sbjct: 97 -DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLAD 155
Query: 120 -GL 121
GL
Sbjct: 156 FGL 158
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 93.4 bits (233), Expect = 3e-21
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQ 86
E+ LK L H +IVT+ D + E+ + ++ EY D DL ++ ++ + F+ Q
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 87 LVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
L+ L + V H DLKPQN+LI + LKLA GL
Sbjct: 109 LLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGL 146
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 93.5 bits (233), Expect = 3e-21
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQL 87
E+ LK L H++I+ + + +++I EY + DL ++ + +S + F+ QL
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQL 141
Query: 88 VLALKFLRENNVCHFDLKPQNILI------KNNTLKLA--GL 121
+ + F H DLKPQN+L+ + LK+ GL
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 92.4 bits (230), Expect = 7e-21
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 24/146 (16%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWD----ERYVYIILEYC 60
+ A+K + + + E+ + HIV +LD + +R + II+E
Sbjct: 56 KCALKLLYDSPKARQ-------EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 108
Query: 61 DGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN---- 114
+GG+L S I R + +E + + +R + A++FL +N+ H D+KP+N+L +
Sbjct: 109 EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA 168
Query: 115 TLKLA--GL----KQGVSEKAKGSAY 134
LKL G Q + + Y
Sbjct: 169 VLKLTDFGFAKETTQNALQTPCYTPY 194
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 92.7 bits (230), Expect = 1e-20
Identities = 23/125 (18%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
V ++ I+ S + E+ KL +H +IV + ++++ + G
Sbjct: 53 EYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS 112
Query: 65 LCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGL 121
I +H + ++E ++ ++ AL ++ H +K +ILI + + L+GL
Sbjct: 113 AKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGL 172
Query: 122 KQGVS 126
+
Sbjct: 173 --RSN 175
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 91.1 bits (227), Expect = 2e-20
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSH------EKLSEFQCQ 81
EI +K L H++IV + D + E + ++ E+ D DL ++ S L +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 82 QFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
F QL+ L F EN + H DLKPQN+LI K LKL GL
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGL 154
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 90.4 bits (225), Expect = 2e-20
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 18/125 (14%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDF----LWDERYVYIILEYC 60
+ A+K + + E++ + HIV ++D + + I++E
Sbjct: 45 KFALKMLQDCPKARR-------EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97
Query: 61 DGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN---- 114
DGG+L S I R + +E + + ++ + A+++L N+ H D+KP+N+L +
Sbjct: 98 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 157
Query: 115 TLKLA 119
LKL
Sbjct: 158 ILKLT 162
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 88.9 bits (221), Expect = 7e-20
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERYVYIILEYCDGGDL 65
A K I+ SE + + EI+ L H +IV +L + D + ++I++E+C GG +
Sbjct: 47 AAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGK-LWIMIEFCPGGAV 103
Query: 66 CSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAGLKQ 123
+ + ++ L+E Q Q RQ++ AL FL + H DLK N+L+ ++LA
Sbjct: 104 DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADF-- 161
Query: 124 GVSEKAKGSAYIEQGNTKV 142
GVS AK +++ ++ +
Sbjct: 162 GVS--AKNLKTLQKRDSFI 178
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 90.2 bits (224), Expect = 8e-20
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDF----LWDERYVYIILEYC 60
+ A+K + + E++ HIV ++D + + I++E
Sbjct: 89 KFALKMLQDCPKARR-------EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141
Query: 61 DGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN---- 114
DGG+L S I R + +E + + ++ + A+++L N+ H D+KP+N+L +
Sbjct: 142 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 201
Query: 115 TLKLA 119
LKL
Sbjct: 202 ILKLT 206
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 90.6 bits (225), Expect = 9e-20
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLDFLWDERY-----V 53
VAIK + ++ E+ D I+ EI L L +I+ + D + + +
Sbjct: 48 KNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105
Query: 54 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
YI+LE D DL ++ L+E + + L+L F+ E+ + H DLKP N L+
Sbjct: 106 YIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQ 164
Query: 114 N-TLKLA--GLKQGVSEKAKGSAYIEQGNTK 141
+ ++K+ GL + ++ + + + +
Sbjct: 165 DCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 89.7 bits (223), Expect = 9e-20
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 21/146 (14%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLW-------DERYVYIILEY 59
VAIK + + NR + ++ L +LHH +IV + + + + Y+ +++EY
Sbjct: 51 VAIKKVIQDPRFRNR---ELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107
Query: 60 CDGGDLCSFIRSHEK----LSEFQCQQFVRQLVLALKFLREN--NVCHFDLKPQNILI-- 111
L R++ + + F+ QL+ ++ L NVCH D+KP N+L+
Sbjct: 108 VPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE 166
Query: 112 KNNTLKLA--GLKQGVSEKAKGSAYI 135
+ TLKL G + +S AYI
Sbjct: 167 ADGTLKLCDFGSAKKLSPSEPNVAYI 192
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 88.2 bits (219), Expect = 2e-19
Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERYVYIILEYCDGGD 64
+VA+K +D K + R + + NE+ ++ H ++V M +L E +++++E+ GG
Sbjct: 72 QVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGE-ELWVLMEFLQGGA 128
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
L + +L+E Q ++ AL +L V H D+K +IL+ + +KL+
Sbjct: 129 LTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLS 183
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 87.8 bits (218), Expect = 2e-19
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
H EVAI+ ID + +E++ + E+ A + H+++V + ++ II C G
Sbjct: 55 HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114
Query: 64 DLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLA--G 120
L S +R + L + +Q +++V + +L + H DLK +N+ N + + G
Sbjct: 115 TLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFG 174
Query: 121 L 121
L
Sbjct: 175 L 175
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 87.0 bits (216), Expect = 3e-19
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERYVYIILEYCDGGD 64
EVAI+ ++ + + + + I+NEI ++ + +IV LD +L + +++++EY GG
Sbjct: 47 EVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDE-LWVVMEYLAGGS 103
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
L + + E Q R+ + AL+FL N V H D+K NIL+ + ++KL
Sbjct: 104 LTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 86.6 bits (214), Expect = 9e-19
Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 7/114 (6%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
+ +K E F ++ LK + + ++ E G L
Sbjct: 97 KFVLKVQKPANPWE--FYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTL 154
Query: 66 CSFIRSH-----EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ I + + + + F +++ ++ + + + H D+KP N ++ N
Sbjct: 155 LNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNG 208
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 84.7 bits (210), Expect = 2e-18
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERYVYIILEYCDGGDL 65
VAIK ID + +E+ + I EI L ++ +L D + ++II+EY GG
Sbjct: 50 VAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK-LWIIMEYLGGGSA 107
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
+ L E Q +R+++ L +L H D+K N+L+ + +KLA
Sbjct: 108 LDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 161
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 85.2 bits (211), Expect = 2e-18
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 16/130 (12%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLW-------DERYVYI 55
E A+K + E + +I+ E+ +K L H +IV + ++
Sbjct: 53 GREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFL 110
Query: 56 ILEYCDGGDLCSFI---RSHEKLSEFQCQQFVRQLVLALKFL--RENNVCHFDLKPQNIL 110
+L G L F+ S LS + Q A++ + ++ + H DLK +N+L
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170
Query: 111 I-KNNTLKLA 119
+ T+KL
Sbjct: 171 LSNQGTIKLC 180
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 85.2 bits (211), Expect = 3e-18
Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 53/177 (29%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFL----------------- 47
A+K + + +NR E+ +K+L H +I+ ++D+
Sbjct: 33 KRFALKKVLQDPRYKNR------ELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDH 86
Query: 48 ---------------------WDERYVYIILEYCDGGDLCSFIRSHEK----LSEFQCQQ 82
+Y+ +I+EY L ++S + +
Sbjct: 87 NKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISI 145
Query: 83 FVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLA--GLKQGVSEKAKGSAYI 135
++ QL A+ F+ +CH D+KPQN+L+ + LKL G + + AYI
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYI 202
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 84.6 bits (210), Expect = 4e-18
Identities = 28/106 (26%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 28 EIKALKLLHHQHIVTMLD--------FLWDERYVYIILEYCDGGDLCSFIRS-HEKLSEF 78
EIK L+LL H+++V +++ + + +Y++ ++C+ DL + + K +
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS 124
Query: 79 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA--GL 121
+ ++ ++ L+ L ++ N + H D+K N+LI + LKLA GL
Sbjct: 125 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL 170
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 83.5 bits (207), Expect = 4e-18
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERYVYIILEYCDGGDL 65
VAIK I+ K + D ++ EI+A+ HH +IV+ F+ + ++++++ GG +
Sbjct: 43 VAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE-LWLVMKLLSGGSV 100
Query: 66 CSFIRSHEK--------LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
I+ L E +R+++ L++L +N H D+K NIL+ + ++
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSV 160
Query: 117 KLA 119
++A
Sbjct: 161 QIA 163
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 83.4 bits (207), Expect = 6e-18
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 7 VAIKCI--DKTKVSENRFDS-IVNEIKALKLLH---HQHIVTMLD-----FLWDERYVYI 55
VA+K + V E+ L+ L H ++V ++D E V +
Sbjct: 37 VALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTL 96
Query: 56 ILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-K 112
+ E+ D DL +++ L + +RQ + L FL N + H DLKP+NIL+
Sbjct: 97 VFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS 155
Query: 113 NNTLKLA--GL 121
T+KLA GL
Sbjct: 156 GGTVKLADFGL 166
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 83.2 bits (206), Expect = 7e-18
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERYVYIILEYCDGGDL 65
VAIK + E+ I+ EI ++ H+V + + ++I++EYC G +
Sbjct: 57 VAIKQVP----VESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTD-LWIVMEYCGAGSV 111
Query: 66 CSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
IR K L+E + ++ + L++L H D+K NIL+ KLA
Sbjct: 112 SDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLA 167
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 82.7 bits (205), Expect = 7e-18
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
H +VA+K ++ T + + + NE+ L+ H +I+ + + + I+ ++C+G
Sbjct: 46 HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGS 104
Query: 64 DLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA-- 119
L + + E K + RQ + +L ++ H DLK NI + ++NT+K+
Sbjct: 105 SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDF 164
Query: 120 GL 121
GL
Sbjct: 165 GL 166
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 83.9 bits (208), Expect = 8e-18
Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 19/145 (13%)
Query: 1 NEQHTEVAIKCIDKT---KVSENRFDSIVN------EIKALKLLHHQHIVTMLDFLWDER 51
+ + VAIK + T + N EI+ L HH +I+ + D
Sbjct: 43 DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102
Query: 52 Y-----VYIILEYCDGGDLCSFIRS-HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLK 105
+Y++ E DL I +S Q F+ ++L L L E V H DL
Sbjct: 103 EPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLH 161
Query: 106 PQNILI-KNNTLKLA--GLKQGVSE 127
P NIL+ NN + + L + +
Sbjct: 162 PGNILLADNNDITICDFNLAREDTA 186
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 83.0 bits (206), Expect = 9e-18
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 28 EIKALKLLH---HQHIVTMLD-----FLWDERYVYIILEYCDGGDLCSFIRSHEK--LSE 77
E+ L+ L H ++V + D E + ++ E+ D DL +++ + +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 78 FQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
+ + QL+ L FL + V H DLKPQNIL+ + +KLA GL
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 84.1 bits (208), Expect = 1e-17
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 23/134 (17%)
Query: 6 EVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWD--ERYVYIILEYCDGG 63
+ A+K I+ S EI L+ L H +++++ +R V+++ +Y +
Sbjct: 50 DYALKQIEG----TGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH- 104
Query: 64 DLCSFIRSH---------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--- 111
DL I+ H +L + + Q++ + +L N V H DLKP NIL+
Sbjct: 105 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGE 164
Query: 112 --KNNTLKLA--GL 121
+ +K+A G
Sbjct: 165 GPERGRVKIADMGF 178
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 81.2 bits (201), Expect = 3e-17
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
++VA+K + + R + + E+ +K L H +IV + + + I+ EY G
Sbjct: 61 SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120
Query: 65 LCSFIRSHE---KLSEFQCQQFVRQLVLALKFL--RENNVCHFDLKPQNILI-KNNTLKL 118
L + +L E + + + +L R + H +LK N+L+ K T+K+
Sbjct: 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV 180
Query: 119 A 119
Sbjct: 181 C 181
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 81.5 bits (202), Expect = 3e-17
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 15/124 (12%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWD--ERYVYIILEYCD 61
+V +K + K + I EIK L+ L +I+T+ D + D R ++ E+ +
Sbjct: 62 EKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN 116
Query: 62 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--KNNTLKLA 119
D + L+++ + ++ +++ AL + + H D+KP N++I ++ L+L
Sbjct: 117 NTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLI 173
Query: 120 --GL 121
GL
Sbjct: 174 DWGL 177
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 82.0 bits (203), Expect = 4e-17
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDS--IVNEIKALKLLH-HQHIVTMLDFLWDERY--VYI 55
VA+K I +N D+ EI L L H++IV +L+ L + VY+
Sbjct: 31 RRTGEVVAVKKI--FDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88
Query: 56 ILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN- 114
+ +Y + DL + IR+ L Q V QL+ +K+L + H D+KP NIL+
Sbjct: 89 VFDYMET-DLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAEC 146
Query: 115 TLKLA--GL 121
+K+A GL
Sbjct: 147 HVKVADFGL 155
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 81.6 bits (202), Expect = 5e-17
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLDFLW------DERY 52
+VAIK + + ++ + E++ LK + H++++ +LD D
Sbjct: 47 GRTGAKVAIKKL--YRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 112
Y+++ + DL ++ EKL E + Q V Q++ L+++ + H DLKP N+ +
Sbjct: 105 FYLVMPFMGT-DLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN 162
Query: 113 NN-TLKLA--GLKQGVSE 127
+ LK+ GL +
Sbjct: 163 EDCELKILDFGLARQADS 180
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 81.3 bits (201), Expect = 5e-17
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 7 VAIKCID-KTKVSENRFDSIVNEIKALKLLHHQHIVTMLD-FLWDERYVYIILEYCDGGD 64
VAIK + K S ++ I+ E++ L+ L H + + +L + ++++EYC G
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT-AWLVMEYCLGS- 139
Query: 65 LCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
+ H+K L E + + L +L +N+ H D+K NIL+ +KL
Sbjct: 140 ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG 196
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 81.2 bits (201), Expect = 5e-17
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
A+K +DK K V + + +NE + L+ ++ +V + D +Y+++EY GG++
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>1oys_A Ribonuclease PH; transferase, tRNA processing; 2.40A {Bacillus
subtilis} SCOP: d.14.1.4 d.101.1.1 PDB: 1oyp_A 1oyr_A
Length = 245
Score = 79.3 bits (196), Expect = 6e-17
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
+GS I GNTKVIC+ +P KG + E+ P A+ +T
Sbjct: 19 DFISHPEGSVLITAGNTKVICNASVEDRVPPFLR----GGGKGWITAEYSMLPQATNQQT 74
Query: 184 GWLRDSE-------EKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINC 236
++S E+ + RAL V + + + V+Q DG +A+I
Sbjct: 75 I--QESSKGKISGRTMEIQRLIGRALRAVVDLEKLGERTIWIDCDVIQADGGTRTASITG 132
Query: 237 ANLALVDAAIPMYDLVTSSTLALRG 261
A LA+ A + T T +
Sbjct: 133 AFLAMAIAIGKLIKAGTIKTNPITD 157
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 81.1 bits (201), Expect = 6e-17
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLDFLWDERY-----V 53
VAIK I+ + + + EIK LK H++I+T+ + + + V
Sbjct: 33 KPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89
Query: 54 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
YII E DL I + + LS+ Q F+ Q + A+K L +NV H DLKP N+LI +
Sbjct: 90 YIIQELMQT-DLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS 147
Query: 114 N-TLKLA--GLKQGVSEKAKGSAYIEQGN 139
N LK+ GL + + E A ++
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQ 176
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 80.0 bits (198), Expect = 8e-17
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 6 EVAIKCIDKTKVSEN-----RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+VAIK I E RF+ E+ L HQ+IV+M+D ++ Y+++EY
Sbjct: 38 KVAIKAI-FIPPREKEETLKRFE---REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYI 93
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+G L +I SH LS F Q++ +K + + H D+KPQNILI N TLK+
Sbjct: 94 EGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIF 153
Query: 120 --GLKQGVSE 127
G+ + +SE
Sbjct: 154 DFGIAKALSE 163
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 80.8 bits (200), Expect = 9e-17
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVN------EIKALKLLHHQHIVTMLDFLWDERY-- 52
N VAIK I + F+ EIK L H++I+ + D +
Sbjct: 49 NLNKVRVAIKKI-------SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 53 ---VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
VYI+ + + DL +++ + LS F+ Q++ LK++ NV H DLKP N+
Sbjct: 102 MKDVYIVQDLMET-DLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 159
Query: 110 LIKNN-TLKLA--GLKQGVSEKAKGSAYI 135
L+ LK+ GL + + ++
Sbjct: 160 LLNTTCDLKICDFGLARVADPDHDHTGFL 188
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 80.4 bits (199), Expect = 1e-16
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLD-FLWDERY----- 52
+VAIK + ++ ++ + E+ LK + H++++ +LD F
Sbjct: 46 KRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103
Query: 53 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 112
Y+++ + DL + K SE + Q V Q++ LK++ V H DLKP N+ +
Sbjct: 104 FYLVMPFMQT-DLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 160
Query: 113 NN-TLKLA--GLKQGVSE 127
+ LK+ GL +
Sbjct: 161 EDCELKILDFGLARHADA 178
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 80.3 bits (198), Expect = 1e-16
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+A K I + + I+ E++ L + +IV + + + I +E+ DGG
Sbjct: 58 GLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILI-KNNTLKLA 119
L ++ ++ E + ++ L +LRE + H D+KP NIL+ +KL
Sbjct: 117 SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 174
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo
sapiens}
Length = 109
Score = 74.1 bits (183), Expect = 2e-16
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 352 LNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDT-KILDITPEA 410
N+ L +D F VG + AHK +L++ S VF MF+G+L E I D+ P A
Sbjct: 3 FNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVEPAA 62
Query: 411 FSTMLD 416
F +L
Sbjct: 63 FLILLK 68
>2wnr_A Probable exosome complex exonuclease 2; phosphate binding, 3'-5'
exoribonuclease, hydrolase; 2.65A {Methanothermobacter
thermautotrophicusorganism_taxid}
Length = 271
Score = 78.2 bits (193), Expect = 2e-16
Identities = 39/178 (21%), Positives = 61/178 (34%), Gaps = 35/178 (19%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSV-FEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIR 182
GV KA+GS+ ++ GNT++I V + E P T G + + P AS
Sbjct: 42 GVISKAEGSSRVKLGNTQIIVGVKPQIGE-PFPDTP-----EMGVILTNSELLPMASPTF 95
Query: 183 TGWLRDSEEKELGNHLKRALEPAVC--------RHEFSNFQVDLFVLVLQNDGSALSAAI 234
D EL + R + + + + L + ++ DG+ AA+
Sbjct: 96 EPGPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSKVWMLFLDLHIIDYDGNLFDAAV 155
Query: 235 NCANLALVDAAIP--------------------MYDLVTSSTLALRGGLTFIDPVEEE 272
AL+D IP + T A G +DP EE
Sbjct: 156 LATVAALLDTRIPAAEVEDGEVVINREKMQPLPVNRKALMCTFAKIGNEIVLDPSLEE 213
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 78.1 bits (193), Expect = 3e-16
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
H +VA+K + + +F + NE+ L+ H +I+ + ++ + I+ ++C+G
Sbjct: 58 HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGS 116
Query: 64 DLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA-- 119
L + E K FQ RQ + +L N+ H D+K NI + + T+K+
Sbjct: 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDF 176
Query: 120 GL 121
GL
Sbjct: 177 GL 178
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 78.0 bits (193), Expect = 4e-16
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
AIK ++K + EN+ + E + L H V + D+ +Y L Y G+L
Sbjct: 59 AIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL 118
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 119 KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 163
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 77.3 bits (191), Expect = 4e-16
Identities = 19/140 (13%), Positives = 51/140 (36%), Gaps = 15/140 (10%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFL-----WDERYVYIIL 57
Q ++ +K + S + E L++ H +++ L + +I
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP---VLGACQSPPAPHPTLIT 88
Query: 58 EYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFL--RENNVCHFDLKPQNILI-K 112
+ G L + + + + Q +F + + FL E + L ++++I +
Sbjct: 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE 148
Query: 113 NNTLKLA--GLKQGVSEKAK 130
+ T +++ +K +
Sbjct: 149 DMTARISMADVKFSFQSPGR 168
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 77.8 bits (192), Expect = 4e-16
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E + +K + + E + + E+K ++ L H +++ + L+ ++ + I EY
Sbjct: 32 RETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
GG L I+S + + Q F + + + +L N+ H DL N L+ +N + +
Sbjct: 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVV 149
Query: 119 A--GL 121
A GL
Sbjct: 150 ADFGL 154
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 78.6 bits (194), Expect = 5e-16
Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 16/142 (11%)
Query: 5 TEVAIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLDF------LWDERYVYII 56
VAIK + ++ +N+ + E+ +K ++H++I+ +L+ L + + VYI+
Sbjct: 51 RNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 108
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-T 115
+E D +LC I+ +L + + Q++ +K L + H DLKP NI++K++ T
Sbjct: 109 MELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 165
Query: 116 LKLA--GLKQGVSEKAKGSAYI 135
LK+ GL + + Y+
Sbjct: 166 LKILDFGLARTAGTSFMMTPYV 187
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 78.1 bits (193), Expect = 5e-16
Identities = 29/134 (21%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 5 TEVAIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLDFLW------DERYVYII 56
VA+K + ++ ++ + E++ LK + H++++ +LD + VY++
Sbjct: 55 LRVAVKKL--SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNT 115
DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ + ++
Sbjct: 113 THLMGA-DLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 170
Query: 116 LKLA--GLKQGVSE 127
LK+ GL + ++
Sbjct: 171 LKILDFGLARHTAD 184
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 78.1 bits (193), Expect = 6e-16
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+T VA+K +T + + + E + LK H +IV ++ ++ +YI++E
Sbjct: 136 RADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 194
Query: 61 DGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
GGD +F+R+ +L Q V +++L H DL +N L+ + N LK+
Sbjct: 195 QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKI 254
Query: 119 A--GLKQGVSEKAKGSAYIEQGNTKVI 143
+ G+ S + Y G + +
Sbjct: 255 SDFGM----SREEADGVYAASGGLRQV 277
>3m7n_G Probable exosome complex exonuclease 2; exosome, RNA, exonuclease,
hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus
fulgidus} PDB: 2ba1_H 2ba0_I 3m85_G
Length = 259
Score = 76.2 bits (188), Expect = 8e-16
Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 28/174 (16%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSV-FEPREIPSSKTSLEYQRSKGELYVEFKFAPFAS 179
+ V EKA+GSA ++ G+T+V+ V +P E P T +G + V + P AS
Sbjct: 37 IIPNVIEKAEGSALVKLGDTQVVVGVKMQPGE-PYPDTP-----DRGVIIVNAELVPLAS 90
Query: 180 QIRTGWLRDSEEKELGNHLKRALEPAVC--------RHEFSNFQVDLFVLVLQNDGSALS 231
D EL + R + + + V + + L +DG+ L
Sbjct: 91 PTFEPGPPDENSIELARVVDRGIRESEAVDLSKLVIEEGEKVWIVFVDIHALDDDGNLLD 150
Query: 232 AAINCANLALVDA-------------AIPMYDLVTSSTLALRGGLTFIDPVEEE 272
A+ A AL++ +P+ DL S T + G +DP EE
Sbjct: 151 ASALAAIAALMNTKVPAERFDLGEDYLLPVRDLPVSVTSLIVGNKYLVDPSREE 204
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 78.7 bits (194), Expect = 9e-16
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ VA+K + + + F + E +K + H ++V +L E YII E+
Sbjct: 242 KKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298
Query: 61 DGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLK 117
G+L ++R + +S Q+ A+++L + N H +L +N L+ +N+ +K
Sbjct: 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVK 358
Query: 118 LA--GLKQGVSEKAKGSAYIEQGNTKV 142
+A GL S G Y K
Sbjct: 359 VADFGL----SRLMTGDTYTAHAGAKF 381
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 76.8 bits (190), Expect = 1e-15
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
A+K + K V + + +E L ++ H I+ M D + +++I++Y +GG+L
Sbjct: 35 AMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELF 94
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
S +R ++ + + ++ LAL++L ++ + DLKP+NIL+
Sbjct: 95 SLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL 139
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 76.8 bits (189), Expect = 1e-15
Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ + D S + D+ +I+ + ++ V L + Y+YI ++ C
Sbjct: 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLC 143
Query: 61 DGGDLCSFI---RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTL 116
+L ++ S E C Q+ A++FL + H DLKP NI ++ +
Sbjct: 144 RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVV 203
Query: 117 KL 118
K+
Sbjct: 204 KV 205
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 77.6 bits (191), Expect = 2e-15
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 5 TEVAIKCIDKTKVSENRFDS--IVNEIKALKLLHHQHIVTMLDFLW------DERYVYII 56
VAIK + ++ +N+ + E+ +K ++H++I+++L+ + + VY++
Sbjct: 88 RNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-T 115
+E D +LC I+ +L + + Q++ +K L + H DLKP NI++K++ T
Sbjct: 146 MELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
Query: 116 LKLA--GLKQGVSEK 128
LK+ GL +
Sbjct: 203 LKILDFGLARTAGTS 217
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 75.4 bits (186), Expect = 3e-15
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ VA+K + + + F + E +K + H ++V +L E YII E+
Sbjct: 35 KKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91
Query: 61 DGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLK 117
G+L ++R + +S Q+ A+++L + N H DL +N L+ +N+ +K
Sbjct: 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 151
Query: 118 LAGLKQGVSEKAKGSAYIEQGNTK 141
+A G+S G Y K
Sbjct: 152 VADF--GLSRLMTGDTYTAHAGAK 173
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 75.0 bits (185), Expect = 3e-15
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+VAIK I + +SE+ F + E K + L H+ +V + +R ++II EY G
Sbjct: 48 QYDVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 104
Query: 64 DLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA-- 119
L +++R + Q + + + A+++L H DL +N L+ +K++
Sbjct: 105 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 120 GLKQGVSEKAKGSAYIEQGNTK 141
GL + V + Y +K
Sbjct: 165 GLSRYVLD----DEYTSSVGSK 182
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 76.2 bits (188), Expect = 3e-15
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFLW----DERYVYIILEYCDG 62
A+K ++K K V N ++ E++ ++ L H +V LW DE ++++++ G
Sbjct: 44 AMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN----LWYSFQDEEDMFMVVDLLLG 99
Query: 63 GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
GDL ++ + E + F+ +LV+AL +L+ + H D+KP NIL+
Sbjct: 100 GDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL 148
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 75.4 bits (186), Expect = 3e-15
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 28/155 (18%)
Query: 1 NEQHTEVAIKCIDKTKVS-ENRFDS--IVNEIKALKLLHHQHIVTMLD------------ 45
N+ VAIK K+ + + EIK ++ L H +IV + +
Sbjct: 33 NDCDKRVAIK-----KIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87
Query: 46 --FLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 103
L + VYI+ EY + DL + + L E + F+ QL+ LK++ NV H D
Sbjct: 88 VGSLTELNSVYIVQEYMET-DLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRD 145
Query: 104 LKPQNILI--KNNTLKLA--GLKQGVSEKAKGSAY 134
LKP N+ I ++ LK+ GL + + +
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 74.5 bits (184), Expect = 3e-15
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+VAIK I + +SE F + E + + L H +V + ++ + ++ E+ + G
Sbjct: 32 KDKVAIKTIREGAMSEEDF---IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG 88
Query: 64 DLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA-- 119
L ++R+ + + + +L E V H DL +N L+ +N +K++
Sbjct: 89 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDF 148
Query: 120 GLKQGVSEKAKGSAYIEQGNTK 141
G+ + V + Y TK
Sbjct: 149 GMTRFVLD----DQYTSSTGTK 166
>2po1_B Probable exosome complex exonuclease 2; RNAse PH,
hydrolase/hydrolase/RNA complex; 1.94A {Pyrococcus
abyssi} PDB: 2po0_B* 2pnz_B 2po2_B*
Length = 277
Score = 74.3 bits (183), Expect = 4e-15
Identities = 42/178 (23%), Positives = 65/178 (36%), Gaps = 34/178 (19%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRT 183
GV EKA+GSA ++ G+T+V+ + P T + G + + P AS
Sbjct: 44 GVIEKAEGSALVKLGSTQVLVGIKTSLGEPFPDTP-----NMGVMTTNVELVPLASPTFE 98
Query: 184 GWLRDSEEKELGNHLKRA--------LEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAIN 235
D EL + R LE V V + V VL +DG+ + A
Sbjct: 99 PGPPDERAIELARVIDRGIRESKALNLEKMVIVPGKIVRVVFIDVHVLDHDGNLMDAIGI 158
Query: 236 CANLALVDAAIP---------------------MYDLVTSSTLALRGGLTFIDPVEEE 272
A AL++A +P + + T A G + +DP +E
Sbjct: 159 AAIAALLNARVPKVRYNEETGEVETLDETEPLPVEKIPVPVTFAKIGNILVVDPSLDE 216
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 73.0 bits (180), Expect = 1e-14
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
+VA+K I + +SE+ F E + + L H +V E +YI+ EY G
Sbjct: 32 QYDVAVKMIKEGSMSEDEF---FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNG 88
Query: 64 DLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA-- 119
L +++RSH + L Q + + + FL + H DL +N L+ ++ +K++
Sbjct: 89 CLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDF 148
Query: 120 GLKQGVSEKAKGSAYIEQGNTK 141
G+ + V + Y+ TK
Sbjct: 149 GMTRYVLD----DQYVSSVGTK 166
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 73.6 bits (181), Expect = 1e-14
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 6/126 (4%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+A+K + ++ ++ I+ ++ + K +IV V+I +E
Sbjct: 50 GHVIAVKQMRRS-GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGT 108
Query: 63 GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-KNNTLKLAG 120
R + E + +V AL +L+ ++ V H D+KP NIL+ + +KL
Sbjct: 109 CAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCD 168
Query: 121 LKQGVS 126
G+S
Sbjct: 169 F--GIS 172
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 73.6 bits (181), Expect = 1e-14
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 13/123 (10%)
Query: 7 VAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLD-FL-----WDERYVYIILEY 59
AIK +D V+ + + I EI LK HH++I T F+ + +++++E+
Sbjct: 52 AAIKVMD---VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108
Query: 60 CDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TL 116
C G + I++ + L E R+++ L L ++ V H D+K QN+L+ N +
Sbjct: 109 CGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168
Query: 117 KLA 119
KL
Sbjct: 169 KLV 171
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 73.1 bits (180), Expect = 2e-14
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIK-ALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+A+K I T V+ ++ ++ +++ + VT L+ E V+I +E D
Sbjct: 32 GQIMAVKRIRAT-VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 90
Query: 63 G---DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILI-KNNTLK 117
I + + E + +V AL+ L +V H D+KP N+LI +K
Sbjct: 91 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 150
Query: 118 LA 119
+
Sbjct: 151 MC 152
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 73.1 bits (180), Expect = 2e-14
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
++ VAIK + R D ++E + H +I+ + + R I+ EY
Sbjct: 74 GQRDVPVAIKALKAGYTERQRRD-FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
+ G L +F+R+H+ + + Q +R + +++L + H DL +N+L+ N K+
Sbjct: 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKV 192
Query: 119 A--GL 121
+ GL
Sbjct: 193 SDFGL 197
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 72.7 bits (179), Expect = 2e-14
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VAIK I+ SE+ + + E++ L ++H +IV + + V +++EY +GG
Sbjct: 32 KDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGS 85
Query: 65 LCSFIRSHEKLSEFQCQQFVR---QLVLALKFL---RENNVCHFDLKPQNILI--KNNTL 116
L + + E L + + Q + +L + + H DLKP N+L+ L
Sbjct: 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145
Query: 117 KLA--GL---KQGVSEKAKGSA 133
K+ G Q KGSA
Sbjct: 146 KICDFGTACDIQTHMTNNKGSA 167
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 73.6 bits (181), Expect = 2e-14
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+++ VAIK + + R D + E + H +I+ + + + V I+ EY
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
+ G L SF+R H+ + + Q +R + +K+L + H DL +NILI N K+
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
Query: 119 A--GL 121
+ GL
Sbjct: 189 SDFGL 193
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 71.5 bits (176), Expect = 3e-14
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 15/129 (11%)
Query: 5 TEVAIKCI--DKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
EVA+K D + +++ E K +L H +I+ + E + +++E+ G
Sbjct: 31 DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90
Query: 63 GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN---VCHFDLKPQNILI-------- 111
G L + ++ + Q+ + +L + + H DLK NILI
Sbjct: 91 GPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGD 149
Query: 112 -KNNTLKLA 119
N LK+
Sbjct: 150 LSNKILKIT 158
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 71.9 bits (177), Expect = 4e-14
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 6 EVAIKCIDKTKVSEN-----RFDSIVNEIKALKLLHHQHIVTMLDFLWDE----RYVYII 56
+VA+K + + ++ + RF E + L+H IV + D E YI+
Sbjct: 39 DVAVK-VLRADLARDPSFYLRFR---REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNT 115
+EY DG L + + ++ + + + AL F +N + H D+KP NI+I N
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 116 LKLA--GLKQGVSEKAK---------GSA-YI--EQ 137
+K+ G+ + +++ G+A Y+ EQ
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 71.5 bits (176), Expect = 4e-14
Identities = 30/145 (20%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ VA+K + D ++ E ++ L + +IV M+ E +++E
Sbjct: 41 KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMA 99
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+ G L +++ + + + + V Q+ + +K+L E+N H DL +N+L+ + K++
Sbjct: 100 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS 159
Query: 120 --GLKQGVSEKAKGSAYIEQGNTKV 142
GL + + + Y Q + K
Sbjct: 160 DFGLSKALRADE--NYYKAQTHGKW 182
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 71.5 bits (176), Expect = 4e-14
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + + +S + F + E +K L HQ +V + + E +YII EY + G
Sbjct: 37 HTKVAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENG 92
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA- 119
L F+++ KL+ + Q+ + F+ E N H DL+ NIL+ + K+A
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIAD 152
Query: 120 -GLKQGVSEKAKGSAYIEQGNTK 141
GL + + + + Y + K
Sbjct: 153 FGLARLIED----NEYTAREGAK 171
>2je6_A RRP42, exosome complex exonuclease 2; nuclease, hydrolase,
exonuclease, phosphorolytic, exoribonuclease, RNA
degradation; HET: 1PE; 1.6A {Sulfolobus solfataricus}
SCOP: d.14.1.4 d.101.1.1 PDB: 2jea_A* 2jeb_A* 2br2_A
2c37_A* 2c38_A* 2c39_A* 3l7z_A
Length = 277
Score = 71.3 bits (175), Expect = 5e-14
Identities = 37/179 (20%), Positives = 60/179 (33%), Gaps = 36/179 (20%)
Query: 124 GVSEKAKGSAYIEQGNTKVICSV-FEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIR 182
++KA GSA ++ G T V+ E + P T ++G L V + P A +
Sbjct: 47 DYAKKADGSALVKLGTTMVLAGTKLEIDK-PYEDTP-----NQGNLIVNVELLPLAYETF 100
Query: 183 TGWLRDSEEKELGNHLKRALEPAVC--------RHEFSNFQVDLFVLVLQNDGSALSAAI 234
D EL + R+L + S + V L V VL G+ L A
Sbjct: 101 EPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACT 160
Query: 235 NCANLALVDAAIPMY---------------------DLVTSSTLALRGGLTFIDPVEEE 272
+ AL + + V + ++A +DP +E
Sbjct: 161 LASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDE 219
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein
binding; 2.40A {Homo sapiens}
Length = 145
Score = 68.0 bits (167), Expect = 5e-14
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 352 LNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTK--ILDITPE 409
+ ++DC V +EF+AHK IL+ SPVF+ MF E+ E + I D+ PE
Sbjct: 20 WENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPE 75
Query: 410 AFSTMLD 416
F M+
Sbjct: 76 VFKEMMC 82
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 71.6 bits (176), Expect = 7e-14
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
++ VAIK + + R D + E + H +I+ + + + + II EY +
Sbjct: 71 KKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME 129
Query: 62 GGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
G L F+R + + S Q +R + +K+L N H DL +NIL+ N K++
Sbjct: 130 NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVS 189
Query: 120 --GLKQGVSEKAKGSAYIEQG 138
GL + + E + Y G
Sbjct: 190 DFGLSRVL-EDDPEATYTTSG 209
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 71.2 bits (175), Expect = 8e-14
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIK-ALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+A+K I T V E ++ ++ ++ +IV L+ E +I +E
Sbjct: 47 GQIMAVKRIRST-VDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105
Query: 63 GDLCSFIRS-----HEKLSEFQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILI-KNNT 115
F + + + E + V AL L+EN + H D+KP NIL+ ++
Sbjct: 106 S-FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN 164
Query: 116 LKLA 119
+KL
Sbjct: 165 IKLC 168
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 71.2 bits (175), Expect = 8e-14
Identities = 25/136 (18%), Positives = 56/136 (41%), Gaps = 15/136 (11%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTML------DFLWDERYVY 54
+ +VA+K + ++ + + + E +K H H+ ++
Sbjct: 48 DGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107
Query: 55 IILEYCDGGDLCSFIRSH------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 108
+IL + GDL +F+ + L +F+ + +++L N H DL +N
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN 167
Query: 109 ILI-KNNTLKLA--GL 121
++ ++ T+ +A GL
Sbjct: 168 CMLAEDMTVCVADFGL 183
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 70.8 bits (174), Expect = 8e-14
Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 16/129 (12%)
Query: 5 TEVAIKCIDKTKVSEN-----RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+ VAIK + +F E+ + L+H +IV + + + +++E+
Sbjct: 45 SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEF 102
Query: 60 CDGGDLCSFIRS-HEKLSEFQCQQFVRQLVLALKFL--RENNVCHFDLKPQNILI----- 111
GDL + + + + + L ++++ + + H DL+ NI +
Sbjct: 103 VPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 112 -KNNTLKLA 119
K+A
Sbjct: 163 NAPVCAKVA 171
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 70.3 bits (173), Expect = 9e-14
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-YVYIILEYCDGG 63
+VA+KCI K + F + E + L H ++V +L + +E+ +YI+ EY G
Sbjct: 45 NKVAVKCI-KNDATAQAF---LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 100
Query: 64 DLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA- 119
L ++RS + L +F + A+++L NN H DL +N+L+ ++N K++
Sbjct: 101 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSD 160
Query: 120 -GL 121
GL
Sbjct: 161 FGL 163
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 71.2 bits (175), Expect = 1e-13
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIK-ALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+A+K I T V+ ++ ++ +++ + VT L+ E V+I +E D
Sbjct: 76 GQIMAVKRIRAT-VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134
Query: 63 G---DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILI-KNNTLK 117
I + + E + +V AL+ L +V H D+KP N+LI +K
Sbjct: 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 194
Query: 118 LA 119
+
Sbjct: 195 MC 196
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 70.4 bits (173), Expect = 1e-13
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+E T VAIK + S +NE +K + H+V +L + + +I+E
Sbjct: 52 DEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 110
Query: 61 DGGDLCSFIRSHEKLSEFQCQ----------QFVRQLVLALKFLRENNVCHFDLKPQNIL 110
GDL S++RS Q ++ + +L N H DL +N +
Sbjct: 111 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 170
Query: 111 I-KNNTLKLA--GL 121
+ ++ T+K+ G+
Sbjct: 171 VAEDFTVKIGDFGM 184
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus,
UBL conjugation pathway, protein binding; 2.50A {Homo
sapiens}
Length = 172
Score = 67.7 bits (166), Expect = 1e-13
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 352 LNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTK--ILDITPE 409
+ ++DC V +EF+AHK IL+ SPVF+ MF E+ E + I D+ PE
Sbjct: 29 WENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPE 84
Query: 410 AFSTMLD 416
F M+
Sbjct: 85 VFKEMMC 91
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 70.0 bits (172), Expect = 2e-13
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
TEV +K +DK N +S + L H+H+V ++ E+
Sbjct: 38 LHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVK 95
Query: 62 GGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKLAG 120
G L ++++ ++ ++ + +QL A+ FL EN + H ++ +NIL+ + G
Sbjct: 96 FGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTG 155
>2nn6_C Exosome complex exonuclease RRP43; RNA, exosome, PM/SCL,
phosphorolytic, hydrolase/transferase complex; 3.35A
{Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Length = 278
Score = 69.6 bits (170), Expect = 2e-13
Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 13/139 (9%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQ 180
+ G A GSA ++ GNT VIC V PS+ KG + P S
Sbjct: 39 VNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAP-----DKGYVVPNVDLPPLCSS 93
Query: 181 IRTGWLRDSEEKELGNHLKRALEPAVC--------RHEFSNFQVDLFVLVLQNDGSALSA 232
E + + +E + + + ++ L DG+ L A
Sbjct: 94 RFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILDA 153
Query: 233 AINCANLALVDAAIPMYDL 251
AL + +P +
Sbjct: 154 CTFALLAALKNVQLPEVTI 172
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 71.4 bits (175), Expect = 2e-13
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 291 TTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 346
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA- 119
L F++ L Q Q+ + ++ N H DL+ NIL+ +N K+A
Sbjct: 347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVAD 406
Query: 120 -GLKQGVSEKAKGSAYIEQGNTKV 142
GL + + + Y + K
Sbjct: 407 FGL----ARLIEDNEYTARQGAKF 426
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 70.9 bits (174), Expect = 2e-13
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
HT+VA+K + +S F + E +K L H +V + + E +YII E+ G
Sbjct: 212 HTKVAVKTMKPGSMSVEAF---LAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKG 267
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA- 119
L F++S E K + F Q+ + F+ + N H DL+ NIL+ + K+A
Sbjct: 268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD 327
Query: 120 -GLKQGVSEKAKGSAYIEQGNTK 141
GL + + + + Y + K
Sbjct: 328 FGLARVIED----NEYTAREGAK 346
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 70.9 bits (174), Expect = 2e-13
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGG 63
T VAIK + +S F + E + +K L H+ +V + + E +YI+ EY G
Sbjct: 208 TTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 263
Query: 64 DLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA- 119
L F++ L Q Q+ + ++ N H DL+ NIL+ +N K+A
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVAD 323
Query: 120 -GLKQGVSEKAKGSAYIEQGNTKV 142
GL + + + Y + K
Sbjct: 324 FGL----ARLIEDNEYTARQGAKF 343
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 69.2 bits (170), Expect = 2e-13
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
VAIK K S++ + + E ++ H HIV ++ + + V+II+E C
Sbjct: 40 ENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELC 97
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
G+L SF++ + L + QL AL +L H D+ +N+L+ N+ +KL
Sbjct: 98 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 157
Query: 119 AGLKQGVSEKAKGSAYIEQGNTKV 142
G+S + S Y + K+
Sbjct: 158 GDF--GLSRYMEDSTYYKASKGKL 179
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 70.5 bits (173), Expect = 3e-13
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDF-LWDERYVYIILEYCDGG 63
+VA+KCI K + F + E + L H ++V +L + ++ +YI+ EY G
Sbjct: 217 NKVAVKCI-KNDATAQAF---LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 272
Query: 64 DLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA- 119
L ++RS + L +F + A+++L NN H DL +N+L+ ++N K++
Sbjct: 273 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSD 332
Query: 120 -GLKQGVSEKAKGS 132
GL + S
Sbjct: 333 FGLTKEASSTQDTG 346
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 69.7 bits (171), Expect = 5e-13
Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
A+K + K + + + E + + +V + D+RY+Y+++EY GGDL
Sbjct: 98 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 157
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ + ++ + E + + ++VLAL + H D+KP N+L+ +
Sbjct: 158 NLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 204
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 68.8 bits (169), Expect = 5e-13
Identities = 25/135 (18%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTML-----DFLWDERYVYI 55
+ +VA+K + S+ + ++E +K H +++ +L +
Sbjct: 59 DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118
Query: 56 ILEYCDGGDLCSFIRSH------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
IL + GDL +++ + + +F+ + L +++L N H DL +N
Sbjct: 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNC 178
Query: 110 LI-KNNTLKLA--GL 121
++ + T+ +A GL
Sbjct: 179 MLRDDMTVCVADFGL 193
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 68.4 bits (168), Expect = 6e-13
Identities = 28/126 (22%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDER-YVYIILEY 59
+ + AIK + + ++ + E ++ L+H +++ ++ + +++L Y
Sbjct: 46 AQNRIQCAIKSL-SRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104
Query: 60 CDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLK 117
GDL FIRS ++ + F Q+ +++L E H DL +N ++ ++ T+K
Sbjct: 105 MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVK 164
Query: 118 LA--GL 121
+A GL
Sbjct: 165 VADFGL 170
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 68.4 bits (168), Expect = 6e-13
Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 23/141 (16%)
Query: 1 NEQHTEVAIK-CIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+ VA+K D T + F E + L L H+HIV D + ++ EY
Sbjct: 42 TKDKMLVAVKALKDPTLAARKDF---QREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEY 98
Query: 60 CDGGDLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFD 103
GDL F+R+H +L Q Q+ + +L + H D
Sbjct: 99 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRD 158
Query: 104 LKPQNILI-KNNTLKLA--GL 121
L +N L+ N +K+ G+
Sbjct: 159 LATRNCLVGANLLVKIGDFGM 179
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 68.5 bits (168), Expect = 6e-13
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 21/130 (16%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIV------TMLDFLWDERYVYIILE 58
VA+K ++ E+ +L H++I+ + +++I
Sbjct: 32 ENVAVKIFSSRDEKSWFRET---ELYNTVMLRHENILGFIASDMTSRHSSTQ--LWLITH 86
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE--------NNVCHFDLKPQNIL 110
Y + G L +++ L C + V + L L + H DLK +NIL
Sbjct: 87 YHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL 145
Query: 111 IKNN-TLKLA 119
+K N +A
Sbjct: 146 VKKNGQCCIA 155
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 68.8 bits (169), Expect = 6e-13
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEY 59
+ +VA+K + K+ + +++++E+K + L H++IV +L V +I EY
Sbjct: 73 EDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
Query: 60 CDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALK--------------FLRENNVCHFDLK 105
C GDL +F+R ++ E + + + FL N H D+
Sbjct: 132 CCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVA 191
Query: 106 PQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTK 141
+N+L+ + K+ GL + + S YI +GN +
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDI---MNDSNYIVKGNAR 227
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 68.8 bits (169), Expect = 6e-13
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ VAIK + + S I++E + + + H+ +L V +I +
Sbjct: 42 KVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMP 99
Query: 62 GGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLA 119
G L ++R H + + + Q+ + +L + + H DL +N+L+K +K+
Sbjct: 100 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT 159
Query: 120 --GL 121
GL
Sbjct: 160 DFGL 163
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 68.5 bits (168), Expect = 7e-13
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 22/140 (15%)
Query: 1 NEQHTEVAIKCI-DKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+ VA+K + + ++ + F E + L +L HQHIV + R + ++ EY
Sbjct: 68 EQDKMLVAVKALKEASESARQDF---QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124
Query: 60 CDGGDLCSFIRSH---------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDL 104
GDL F+RSH L Q Q+ + +L + H DL
Sbjct: 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDL 184
Query: 105 KPQNILI-KNNTLKLA--GL 121
+N L+ + +K+ G+
Sbjct: 185 ATRNCLVGQGLVVKIGDFGM 204
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 68.1 bits (167), Expect = 7e-13
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDF-LWDERYVYIILEY 59
+ + A+K + + E +K H +++++L L E ++L Y
Sbjct: 50 DGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108
Query: 60 CDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLK 117
GDL +FIR+ + F Q+ +K+L H DL +N ++ + T+K
Sbjct: 109 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVK 168
Query: 118 LA--GL 121
+A GL
Sbjct: 169 VADFGL 174
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 68.1 bits (167), Expect = 8e-13
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--VYIILE 58
+ VA+K + K EI L+ L+H+HI+ D + +++E
Sbjct: 57 DGTGEMVAVKAL-KADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLK 117
Y G L ++ H + Q F +Q+ + +L + H DL +N+L+ + +K
Sbjct: 116 YVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVK 174
Query: 118 LA--GL 121
+ GL
Sbjct: 175 IGDFGL 180
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 68.3 bits (167), Expect = 8e-13
Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 17/128 (13%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTML----DFLWDERYVYIILEYC 60
EVA+K + ++ EI +L H++I+ + ++++ +Y
Sbjct: 66 EEVAVKIFSSREERSWFREA---EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN--------NVCHFDLKPQNILIK 112
+ G L ++ + ++ + L L + H DLK +NIL+K
Sbjct: 123 EHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181
Query: 113 NN-TLKLA 119
N T +A
Sbjct: 182 KNGTCCIA 189
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 68.2 bits (167), Expect = 8e-13
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTML----DFLWDERYVYIILEYC 60
+VA+K T+ + ++ EI L+ H++I+ + +Y+I +Y
Sbjct: 61 EKVAVKVFFTTEEASWFRET---EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL--------RENNVCHFDLKPQNILIK 112
+ G L +++S L + V L L + + H DLK +NIL+K
Sbjct: 118 ENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176
Query: 113 NN-TLKLA 119
N T +A
Sbjct: 177 KNGTCCIA 184
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 67.3 bits (165), Expect = 1e-12
Identities = 28/127 (22%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERY--VYIILE 58
+ +VA+K + K + N + EI+ L+ L+H++IV ++ + +I+E
Sbjct: 47 DNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105
Query: 59 YCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTL 116
+ G L ++ ++ K++ Q ++ Q+ + +L H DL +N+L+ + +
Sbjct: 106 FLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQV 165
Query: 117 KLA--GL 121
K+ GL
Sbjct: 166 KIGDFGL 172
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 67.3 bits (165), Expect = 1e-12
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 26/164 (15%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEY 59
++ VA+K + K +++++E+K L L +H +IV +L +I EY
Sbjct: 50 SDAAMTVAVKML-KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 108
Query: 60 CDGGDLCSFIRSH------------------EKLSEFQCQQFVRQLVLALKFLRENNVCH 101
C GDL +F+R L F Q+ + FL N H
Sbjct: 109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIH 168
Query: 102 FDLKPQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKV 142
DL +NIL+ K+ GL + + S Y+ +GN ++
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDI---KNDSNYVVKGNARL 209
>2nn6_E Exosome complex exonuclease RRP42; RNA, exosome, PM/SCL,
phosphorolytic, hydrolase/transferase complex; 3.35A
{Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Length = 305
Score = 67.4 bits (164), Expect = 2e-12
Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 40/193 (20%)
Query: 121 LKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQ 180
++ V GSA ++ G+T ++ V P + ++G L + A+
Sbjct: 51 VETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLEKP-----NEGYLEFFVDCSASATP 105
Query: 181 IRTGWLRDSEEKELGNHLKRALEPAVC--------RHEFSNFQVDLFVLVLQNDGSALSA 232
G D E+ N L R + + + VL+L+ G+ A
Sbjct: 106 EFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDA 165
Query: 233 AINCANLALVDAAIPMY---------------------------DLVTSSTLALRGGLTF 265
AL + IP ++ TL G
Sbjct: 166 ISIAVKAALFNTRIPRVRVLEDEEGSKDIELSDDPYDCIRLSVENVPCIVTLCKIGYRHV 225
Query: 266 IDPVEEEVAYCQS 278
+D +E A +
Sbjct: 226 VDATLQEEACSLA 238
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 67.3 bits (165), Expect = 2e-12
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 12/130 (9%)
Query: 6 EVAIKCIDKTKVSEN-----RFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
VA+K + +S + R E + L H+V + DF + +Y+ +
Sbjct: 61 IVALKLM-SETLSSDPVFRTRMQ---REARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLI 116
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA 119
+G DL + +R L+ + VRQ+ AL H D+KP+NIL+ ++ L
Sbjct: 117 NGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLV 176
Query: 120 --GLKQGVSE 127
G+ ++
Sbjct: 177 DFGIASATTD 186
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 67.7 bits (165), Expect = 2e-12
Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 21/167 (12%)
Query: 14 KTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY----CD----GGDL 65
K + + +K + ++ + D + Y + G L
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLAGLKQG 124
S +H+ L Q Q++ L L + H L+P +I++ + + L G
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGF--- 250
Query: 125 VSEKAKGSAYIEQGNTKVIC--SVFEPREIPSSKTSLEYQRSKGELY 169
+ G V FEP E+ + + ++ Y R + L
Sbjct: 251 ------EHL-VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLM 290
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 67.5 bits (165), Expect = 2e-12
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDF-LWDERYVYIILEY 59
+ + A+K + + E +K H +++++L L E ++L Y
Sbjct: 114 DGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172
Query: 60 CDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLK 117
GDL +FIR+ + F Q+ +KFL H DL +N ++ + T+K
Sbjct: 173 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVK 232
Query: 118 LA--GL 121
+A GL
Sbjct: 233 VADFGL 238
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 67.4 bits (165), Expect = 2e-12
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 12/130 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ +VA+K + + ++ D + E + +HQ+IV + +I+LE
Sbjct: 98 DPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 156
Query: 61 DGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 111
GGDL SF+R L+ R + ++L EN+ H D+ +N L+
Sbjct: 157 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 216
Query: 112 --KNNTLKLA 119
K+
Sbjct: 217 PGPGRVAKIG 226
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 68.9 bits (168), Expect = 2e-12
Identities = 79/455 (17%), Positives = 133/455 (29%), Gaps = 136/455 (29%)
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALK-----FLRENNVCH-----FDLKPQNILIKNNTL 116
++ S + + QF + L L L +L N++ H + L+K L
Sbjct: 66 GYVSS--LVEPSKVGQFDQVLNLCLTEFENCYLEGNDI-HALAAKLLQENDTTLVKTKEL 122
Query: 117 -----KLAGLKQGVSEKAKGSAYIE---QGNTKVICSVF-----------EPREIPSSKT 157
+ + +K SA +GN + + ++F E R++
Sbjct: 123 IKNYITARIMAKRPFDKKSNSALFRAVGEGNAQ-LVAIFGGQGNTDDYFEELRDL----- 176
Query: 158 SLEYQRSKGEL--YVEFKFAPFASQIRT---------------GWLRDSEEKELGNHLKR 200
YQ + ++F + IRT WL + ++L
Sbjct: 177 ---YQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLS 233
Query: 201 ALE--PAVCRHEFSNFQVDLFVLVLQ--NDGSALSAAINCANLALVDA-AIPMYD----L 251
P + + +++ V +L S L A + LV A AI D
Sbjct: 234 IPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQ-GLVTAVAIAETDSWESF 292
Query: 252 VTSSTLALRGGLTFIDPVEEEVAYCQ------SLSSSEDDDS---GVITLSYMSVIQQVT 302
S A+ L FI C SL S +DS S M I +T
Sbjct: 293 FVSVRKAITV-LFFI------GVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLT 345
Query: 303 QVTLVGTIQQ--ERL--ADHI-----------------EQLIGCCESLC-------TD-- 332
Q + + + L + + L G +L D
Sbjct: 346 QEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQS 405
Query: 333 RV----QKLVSDH----VTLPERGRYVLNSGLWSDCKFYVGNDVHCK--EFKAHKLILSM 382
R+ +KL + V P +S L + D+ F A + +
Sbjct: 406 RIPFSERKLKFSNRFLPVASP------FHSHLLVPASDLINKDLVKNNVSFNAKDIQI-- 457
Query: 383 SSPVFATMFHGE-LCEKGDTKILDITPEAFSTMLD 416
PV+ T F G L + I +
Sbjct: 458 --PVYDT-FDGSDLRVLSGSISERIVDCIIRLPVK 489
Score = 52.4 bits (125), Expect = 3e-07
Identities = 62/327 (18%), Positives = 100/327 (30%), Gaps = 113/327 (34%)
Query: 18 SENRFDSIVNEIKALKLL-------HHQHIVTMLDFLWDERYVYIILEYCDGGD------ 64
S F V KA+ +L + + T L I+ + + +
Sbjct: 288 SWESFFVSV--RKAITVLFFIGVRCYEAYPNTSLPPS-------ILEDSLENNEGVPSPM 338
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLK--PQNILIKNNTLKLAGLK 122
L I + L++ Q Q +V + L L +N+++ L GL
Sbjct: 339 LS--ISN---LTQEQVQDYVNKTN---SHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLN 390
Query: 123 QGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEF--KFAPFASQ 180
+ KAK + ++Q IP S +R K + F +PF S
Sbjct: 391 LTL-RKAKAPSGLDQ------------SRIPFS------ER-KLKFSNRFLPVASPFHS- 429
Query: 181 IRTGWLRDSEEKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANLA 240
HL L PA DL L + + +A
Sbjct: 430 ----------------HL---LVPAS----------DLINKDLVKNNVSFNAK------- 453
Query: 241 LVDAAIPMYDLVTSSTL-ALRGGLT-------FIDPVEEEVAYCQSLSSSE------DDD 286
D IP+YD S L L G ++ PV+ E ++
Sbjct: 454 --DIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETT--TQFKATHILDFGPGGA 509
Query: 287 SGVITLSYMSVIQQVT--QVTLVGTIQ 311
SG+ L + T +V + GT+
Sbjct: 510 SGLGVL--THRNKDGTGVRVIVAGTLD 534
Score = 42.3 bits (99), Expect = 4e-04
Identities = 46/307 (14%), Positives = 92/307 (29%), Gaps = 121/307 (39%)
Query: 90 ALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIE-------QGNTKV 142
A ++ + +I + NN + L G K Y G K
Sbjct: 1649 ADNHFKDT----YGFSILDI-VINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKT 1703
Query: 143 ICSVFEPREIPSSKTSLEYQRSKGELYV-EFKFAPFASQIRTGWLRDSEEKELGNHLKRA 201
+F+ EI TS ++ KG L +F +Q
Sbjct: 1704 E-KIFK--EINEHSTSYTFRSEKGLLSATQF------TQ--------------------- 1733
Query: 202 LEPAVCRHEFSNFQVDLFVLVLQNDG----------------SALSAAINCAN-LALVDA 244
PA+ E + F+ L++ G +AL++ A+ +++
Sbjct: 1734 --PALTLMEKAAFE------DLKSKGLIPADATFAGHSLGEYAALAS---LADVMSIESL 1782
Query: 245 AIPMYDLVTSSTLALRG-----------------GLTFIDPVEEEVAYCQSLSSSEDDDS 287
++V RG G+ I+P ++ Q E
Sbjct: 1783 V----EVV-----FYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQ-----EALQY 1828
Query: 288 GVITLSYMS--VIQQV------TQVTLVGTIQQERLADHIEQLIGCCESLCTDRVQKLVS 339
V + + +++ V Q G ++ A ++ + + ++QK+
Sbjct: 1829 VVERVGKRTGWLVEIVNYNVENQQYVAAGDLR----A--LDTVTNVLNFI---KLQKI-- 1877
Query: 340 DHVTLPE 346
D + L +
Sbjct: 1878 DIIELQK 1884
Score = 31.9 bits (72), Expect = 0.54
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 20/98 (20%)
Query: 290 ITLSYMSVIQQV---TQVTLVGTIQQERLADHIEQLIGCCESLCTD-----------RVQ 335
+TLS+ S+ + T + + QE+ + + E D +
Sbjct: 9 LTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPT---EGFAADDEPTTPAELVGKFL 65
Query: 336 KLVSDHVTLPERGRY--VLNSGLWS-DCKFYVGNDVHC 370
VS V + G++ VLN L + + GND+H
Sbjct: 66 GYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHA 103
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 66.9 bits (164), Expect = 2e-12
Identities = 33/140 (23%), Positives = 69/140 (49%), Gaps = 21/140 (15%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYC 60
++ VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY
Sbjct: 65 KEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 61 DGGDLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDL 104
G+L ++R+ E+++ QL +++L H DL
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 105 KPQNILI-KNNTLKLA--GL 121
+N+L+ +NN +K+A GL
Sbjct: 184 AARNVLVTENNVMKIADFGL 203
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 66.9 bits (164), Expect = 2e-12
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 12/130 (9%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ +VA+K + + ++ D + E + +HQ+IV + +I++E
Sbjct: 57 DPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM 115
Query: 61 DGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 111
GGDL SF+R L+ R + ++L EN+ H D+ +N L+
Sbjct: 116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 175
Query: 112 --KNNTLKLA 119
K+
Sbjct: 176 PGPGRVAKIG 185
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 66.1 bits (162), Expect = 3e-12
Identities = 24/126 (19%), Positives = 53/126 (42%), Gaps = 6/126 (4%)
Query: 1 NEQHTEVAIKCI-DKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY 59
+ + VA+KC+ D + E+ A+ L H++++ + + + ++ E
Sbjct: 43 SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101
Query: 60 CDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLK 117
G L +R H+ ++ Q+ + +L H DL +N+L+ + +K
Sbjct: 102 APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVK 161
Query: 118 LA--GL 121
+ GL
Sbjct: 162 IGDFGL 167
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 67.1 bits (164), Expect = 3e-12
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQ------HIVTMLDFLWDERYVYIIL 57
H VA+K + + + EI+ L+ L Q +++ ML+ ++ +
Sbjct: 122 HQHVALKMV---RNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF 178
Query: 58 EYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-- 113
E +L I+ + + S ++F ++ L L +N + H DLKP+NIL+K
Sbjct: 179 ELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG 237
Query: 114 -NTLKL 118
+ +K+
Sbjct: 238 RSGIKV 243
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 66.5 bits (163), Expect = 3e-12
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALK-LLHHQHIVTMLDFLWDERYVYIILEY 59
+ + AIK + K S++ E++ L L HH +I+ +L Y+Y+ +EY
Sbjct: 49 DGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 107
Query: 60 CDGGDLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFD 103
G+L F+R LS Q F + + +L + H D
Sbjct: 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD 167
Query: 104 LKPQNILI-KNNTLKLA--GL 121
L +NIL+ +N K+A GL
Sbjct: 168 LAARNILVGENYVAKIADFGL 188
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 65.7 bits (161), Expect = 3e-12
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+ VA+K K + + + ++E +K L H HIV ++ + +E +II+E
Sbjct: 37 KGEKINVAVKTC-KKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELY 94
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
G+L ++ ++ L + Q+ A+ +L N H D+ +NIL+ +KL
Sbjct: 95 PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKL 154
Query: 119 A--GLKQGVSEKAKGSAYIEQGNTKV 142
GL + + + Y + T++
Sbjct: 155 GDFGLSRYIED----EDYYKASVTRL 176
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 66.6 bits (163), Expect = 4e-12
Identities = 34/160 (21%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYC 60
+ T+VA+K + K+ +E +++E++ +K++ H++I+ +L + +Y+I+EY
Sbjct: 99 NRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 61 DGGDLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDL 104
G+L ++++ E+LS Q+ +++L H DL
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 217
Query: 105 KPQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTK 141
+N+L+ ++N +K+A GL + + Y + N +
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDIHH---IDYYKKTTNGR 254
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 66.1 bits (162), Expect = 4e-12
Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 28/148 (18%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
+T VA+K + K S + +++E LK ++H H++ + + + +I+EY
Sbjct: 50 RAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYA 108
Query: 61 DGGDLCSFIRSH------------------------EKLSEFQCQQFVRQLVLALKFLRE 96
G L F+R L+ F Q+ +++L E
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 97 NNVCHFDLKPQNILI-KNNTLKLA--GL 121
+ H DL +NIL+ + +K++ GL
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGL 196
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 66.2 bits (162), Expect = 4e-12
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
V IK I + K F ++ + + A+ L H HIV +L + ++ +Y
Sbjct: 41 IKIPVCIKVI-EDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPL 98
Query: 63 GDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLA- 119
G L +R H L + Q+ + +L E+ + H +L +N+L+K + +++A
Sbjct: 99 GSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVAD 158
Query: 120 -GL 121
G+
Sbjct: 159 FGV 161
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 66.2 bits (162), Expect = 4e-12
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCD 61
+ VAIK + + S I++E + + + H+ +L V +I +
Sbjct: 42 KVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMP 99
Query: 62 GGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLA 119
G L ++R H + + + Q+ + +L + + H DL +N+L+K +K+
Sbjct: 100 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT 159
Query: 120 --GL 121
GL
Sbjct: 160 DFGL 163
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 67.2 bits (164), Expect = 4e-12
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 6 EVAIKCIDKTKVSE--NRFDSIVNEIKALKLLHHQHIVTMLDF-----LWDERYVYIILE 58
V +K + + +E + E + L + H IV + +F + YI++E
Sbjct: 108 PVVLKGLVHSGDAEAQAMA---MAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTLKL 118
Y G L +KL + ++ +++ AL +L + + DLKP+NI++ LKL
Sbjct: 165 YVGGQSLKRSKG--QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKL 222
Query: 119 A 119
Sbjct: 223 I 223
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 66.7 bits (163), Expect = 5e-12
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
A+K ++K + E L + I + DE Y+Y+++EY GGDL
Sbjct: 90 AMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLL 149
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + ++ + ++ ++V+A+ + H D+KP NIL+
Sbjct: 150 TLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 66.2 bits (162), Expect = 5e-12
Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-----HHQHIVTMLD-FLWDERYVYI 55
+ A+K + + + S E LK + ++ +IV F++ + ++ +
Sbjct: 58 DNKKYYAVKVV---RNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD-HMCL 113
Query: 56 ILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 113
I E G L I + + + +++ AL +LR+ ++ H DLKP+NIL+ +
Sbjct: 114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172
Query: 114 NTLKLAGLKQGVSEKAKGSAYIEQGNT--KVI 143
+ + + K +T K+I
Sbjct: 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLI 204
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 67.2 bits (164), Expect = 5e-12
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
VAIK K S++ + + E ++ H HIV ++ + + V+II+E C
Sbjct: 415 ENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELC 472
Query: 61 DGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKL 118
G+L SF++ + L + QL AL +L H D+ +N+L+ N+ +KL
Sbjct: 473 TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 532
Query: 119 AGLKQGVSEKAKGSAYIEQGNTKV 142
G+S + S Y + K+
Sbjct: 533 GDF--GLSRYMEDSTYYKASKGKL 554
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 65.5 bits (160), Expect = 5e-12
Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 21/130 (16%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIV------TMLDFLWDERYVYIILE 58
EVA+K + ++ EI +L H++I+ + W + ++++ +
Sbjct: 27 EEVAVKIFSSREERSWFREA---EIYQTVMLRHENILGFIAADNKDNGTWTQ--LWLVSD 81
Query: 59 YCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL--------RENNVCHFDLKPQNIL 110
Y + G L ++ + ++ + L L + + H DLK +NIL
Sbjct: 82 YHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 140
Query: 111 IKNN-TLKLA 119
+K N T +A
Sbjct: 141 VKKNGTCCIA 150
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 65.8 bits (161), Expect = 6e-12
Identities = 35/161 (21%), Positives = 77/161 (47%), Gaps = 24/161 (14%)
Query: 2 EQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEYC 60
++ VA+K + K +E +V+E++ +K++ H++I+ +L + +Y+I+EY
Sbjct: 111 KEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
Query: 61 DGGDLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDL 104
G+L ++R+ E+++ QL +++L H DL
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 229
Query: 105 KPQNILI-KNNTLKLA--GLKQGVSEKAKGSAYIEQGNTKV 142
+N+L+ +NN +K+A GL + ++ Y + N ++
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINN---IDYYKKTTNGRL 267
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 64.9 bits (159), Expect = 6e-12
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 20/140 (14%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
EQ VAIK + K K + +E L H ++V +L + ++ + +I YC
Sbjct: 36 GEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 94
Query: 61 DGGDLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDL 104
GDL F+ L V Q+ +++L ++V H DL
Sbjct: 95 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDL 154
Query: 105 KPQNILI-KNNTLKLA--GL 121
+N+L+ +K++ GL
Sbjct: 155 ATRNVLVYDKLNVKISDLGL 174
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 65.9 bits (161), Expect = 8e-12
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
A+K ++K + + E L + I T+ D+ +Y++++Y GGDL
Sbjct: 103 AMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLL 162
Query: 67 SFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
+ + E +L E + ++ ++V+A+ + + + H D+KP NIL+ N
Sbjct: 163 TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN 211
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 64.6 bits (158), Expect = 8e-12
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VAIK + K + + ++ E + + L + +IV ++ E + +++E GG
Sbjct: 38 IDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGP 95
Query: 65 LCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--G 120
L F+ ++ + + Q+ + +K+L E N H DL +N+L+ + K++ G
Sbjct: 96 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG 155
Query: 121 L 121
L
Sbjct: 156 L 156
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 64.6 bits (158), Expect = 9e-12
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILE 58
+ VA+K + + E+ D EI+ LK L H +IV + R + +I+E
Sbjct: 36 DNTGEVVAVKKL-QHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 59 YCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTL 116
Y G L +++ H+ ++ + Q+ Q+ +++L H DL +NIL+ N +
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 153
Query: 117 KLA--GL 121
K+ GL
Sbjct: 154 KIGDFGL 160
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 65.1 bits (159), Expect = 1e-11
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILE 58
+ VA+K + + E+ D EI+ LK L H +IV + R + +I+E
Sbjct: 67 DNTGEVVAVKKL-QHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124
Query: 59 YCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTL 116
Y G L +++ H+ ++ + Q+ Q+ +++L H DL +NIL+ N +
Sbjct: 125 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 184
Query: 117 KLA--GL 121
K+ GL
Sbjct: 185 KIGDFGL 191
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 64.4 bits (157), Expect = 1e-11
Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 4/116 (3%)
Query: 6 EVAIKCIDKTKVSENRF-DSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
+VA+ +D V + ++ L + + +LD + ++ E+ GG
Sbjct: 58 QVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGS 117
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 119
L + S + ++ L A V P + + + + LA
Sbjct: 118 LQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLA 171
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 65.1 bits (158), Expect = 1e-11
Identities = 17/149 (11%), Positives = 32/149 (21%), Gaps = 36/149 (24%)
Query: 6 EVAIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFL----------------- 47
+ A+K S + + + A L + D
Sbjct: 89 DFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPF 148
Query: 48 ---------WDERYVYIILEYCDGGDLCSFIR-------SHEKLSEFQCQQFVRQLVLAL 91
+ +++ DL QL+
Sbjct: 149 AQLSPGQDDYAVANYLLLMPAA-SVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLA 207
Query: 92 KFLRENNVCHFDLKPQNILI-KNNTLKLA 119
L+ + H P N+ I + L L
Sbjct: 208 ANLQSKGLVHGHFTPDNLFIMPDGRLMLG 236
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 64.5 bits (158), Expect = 1e-11
Identities = 31/129 (24%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTML-DFLWDERYVYIILEYCDGGDL 65
A+K + K ++++ V E + L+ H + + F +R + ++EY +GG+L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR-LCFVMEYANGGEL 92
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL- 121
+ +E + + + ++V AL++L +V + D+K +N+++ K+ +K+ GL
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 122 KQGVSEKAK 130
K+G+S+ A
Sbjct: 153 KEGISDGAT 161
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 64.3 bits (157), Expect = 2e-11
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD--FLWDERYVYIILE 58
+ VA+K + + + + D EI+ LK LH IV + + + +++E
Sbjct: 49 DNTGALVAVKQL-QHSGPDQQRD-FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106
Query: 59 YCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTL 116
Y G L F++ H +L + + Q+ +++L H DL +NIL++ +
Sbjct: 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 166
Query: 117 KLA--GL 121
K+A GL
Sbjct: 167 KIADFGL 173
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 64.2 bits (157), Expect = 2e-11
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 28/148 (18%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDFLWDERYVYIILEY 59
+VA+K + K K + +++++E+K + L H++IV +L +Y+I EY
Sbjct: 72 TGVSIQVAVKML-KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEY 130
Query: 60 CDGGDLCSFIRSH-----------------------EKLSEFQCQQFVRQLVLALKFLRE 96
C GDL +++RS L+ F Q+ ++FL
Sbjct: 131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190
Query: 97 NNVCHFDLKPQNILI-KNNTLKLA--GL 121
+ H DL +N+L+ +K+ GL
Sbjct: 191 KSCVHRDLAARNVLVTHGKVVKICDFGL 218
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 63.9 bits (156), Expect = 3e-11
Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 28/148 (18%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYC 60
E T VA+K + K + S + E + + +IV +L + + ++ EY
Sbjct: 74 YEPFTMVAVKML-KEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYM 132
Query: 61 DGGDLCSFIRSHEKLSEFQCQ------------------------QFVRQLVLALKFLRE 96
GDL F+RS + RQ+ + +L E
Sbjct: 133 AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE 192
Query: 97 NNVCHFDLKPQNILI-KNNTLKLA--GL 121
H DL +N L+ +N +K+A GL
Sbjct: 193 RKFVHRDLATRNCLVGENMVVKIADFGL 220
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 64.6 bits (157), Expect = 3e-11
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDG 62
+ +VAIK + K + + ++ E + + L + +IV ++ E + +++E G
Sbjct: 362 KQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGG 419
Query: 63 GDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA- 119
G L F+ E++ + + Q+ + +K+L E N H +L +N+L+ + K++
Sbjct: 420 GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISD 479
Query: 120 -GL 121
GL
Sbjct: 480 FGL 482
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 63.1 bits (154), Expect = 5e-11
Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQ------HIVTMLDFLWDERYVYII 56
VA+K + K + ++ +EI+ L+ L+ V ML++ ++ I+
Sbjct: 39 GGRHVAVKIV---KNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIV 95
Query: 57 LEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 114
E G FI+ + ++ Q+ ++ FL N + H DLKP+NIL +
Sbjct: 96 FELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQS 154
Query: 115 TLKLAGLKQGVSEK 128
A + ++
Sbjct: 155 DYTEAYNPKIKRDE 168
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 63.6 bits (155), Expect = 5e-11
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
A+K + K V+++ + E + L+ H + + + ++EY +GG+L
Sbjct: 177 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 236
Query: 67 SFIRSHEKLSEFQCQQFVRQLVLALKFL-RENNVCHFDLKPQNILI-KNNTLKLA--GL- 121
+ SE + + + ++V AL +L E NV + DLK +N+++ K+ +K+ GL
Sbjct: 237 FHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
Query: 122 KQGVSEKAK 130
K+G+ + A
Sbjct: 297 KEGIKDGAT 305
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 62.7 bits (153), Expect = 6e-11
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 22/142 (15%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTMLDF-LWDERYVYIILE 58
VA+K + K + + ++++E+K L + HH ++V +L + +I+E
Sbjct: 54 TATCRTVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 112
Query: 59 YCDGGDLCSFIRSH----------------EKLSEFQCQQFVRQLVLALKFLRENNVCHF 102
+C G+L +++RS + L+ + Q+ ++FL H
Sbjct: 113 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172
Query: 103 DLKPQNILI-KNNTLKLA--GL 121
DL +NIL+ + N +K+ GL
Sbjct: 173 DLAARNILLSEKNVVKICDFGL 194
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL
conjugation pathway, protein binding, ligase; 2.62A
{Homo sapiens} PDB: 3hu6_A
Length = 312
Score = 62.2 bits (151), Expect = 8e-11
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 352 LNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDT--KILDITPE 409
+ ++DC V +EF+AHK IL+ SPVF+ MF E+ E +I D+ PE
Sbjct: 169 WENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPE 224
Query: 410 AFSTMLD 416
F M+
Sbjct: 225 VFKEMMC 231
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 63.0 bits (153), Expect = 1e-10
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKLLH---HQHIVTMLDFLWDERYVYIILEYCDGG 63
A+KC+DK + + +NE L L+ IV M + IL+ +GG
Sbjct: 218 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 277
Query: 64 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
DL + H SE + + +++L L+ + V + DLKP NIL+
Sbjct: 278 DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 61.2 bits (149), Expect = 2e-10
Identities = 27/107 (25%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 8 AIKCIDKTKVSENRFD--SIVNEIKALKLLHHQHIVTMLDFLW-DERYVYIILEYCDGGD 64
A+K + K + + E + L+ + + L + + E +++IL+Y +GG+
Sbjct: 86 AMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGE 145
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L + + E+ +E + Q +V ++VLAL+ L + + + D+K +NIL+
Sbjct: 146 LFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL 192
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 61.0 bits (149), Expect = 2e-10
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 8 AIKCIDKTKVSENRFD--SIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A+K + K + N D E L+ + H IV ++ +Y+ILEY GG+L
Sbjct: 49 AMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL- 121
+ E ++ ++ +AL L + + + DLKP+NI++ +KL GL
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168
Query: 122 KQGVSEKAK 130
K+ + +
Sbjct: 169 KESIHDGTV 177
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 60.6 bits (147), Expect = 3e-10
Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 25/135 (18%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNE--IKALKLLHHQHIV------TMLDFLWDERYVY 54
VA+K S + +NE I + L+ H +I + Y
Sbjct: 35 DERPVAVK-----VFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY-L 88
Query: 55 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE---------NNVCHFDLK 105
+++EY G L ++ H + + L +L + H DL
Sbjct: 89 LVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLN 147
Query: 106 PQNILIKNN-TLKLA 119
+N+L+KN+ T ++
Sbjct: 148 SRNVLVKNDGTCVIS 162
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 60.7 bits (148), Expect = 3e-10
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 8 AIKCIDKTKV-SENRFDSIVNEIKALKL-LHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
AIK + K V ++ + + E + L L H + M + ++ ++EY +GGDL
Sbjct: 46 AIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL 105
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLA--GL- 121
I+S K + + +++L L+FL + + DLK NIL+ + +K+A G+
Sbjct: 106 MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 165
Query: 122 KQGVSEKAK 130
K+ + AK
Sbjct: 166 KENMLGDAK 174
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 60.5 bits (147), Expect = 3e-10
Identities = 25/134 (18%), Positives = 57/134 (42%), Gaps = 23/134 (17%)
Query: 3 QHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTML------DFLWDERYVYII 56
+ VA+K + + E+ +L + H++I+ + + + + +I
Sbjct: 46 LNEYVAVKIFPIQDKQSWQNE---YEVYSLPGMKHENILQFIGAEKRGTSVDVDLW--LI 100
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN----------NVCHFDLKP 106
+ + G L F++++ +S + + L +L E+ + H D+K
Sbjct: 101 TAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKS 159
Query: 107 QNILIKNN-TLKLA 119
+N+L+KNN T +A
Sbjct: 160 KNVLLKNNLTACIA 173
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 60.3 bits (147), Expect = 4e-10
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 8 AIKCIDKTKV-SENRFDSIVNEIKALKL-LHHQHIVTML-DFLWDERYVYIILEYCDGGD 64
A+K + K V + D + E + +H +V + F + R ++ ++EY +GGD
Sbjct: 38 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR-LFFVIEYVNGGD 96
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL 121
L ++ KL E + + ++ LAL +L E + + DLK N+L+ +KL G+
Sbjct: 97 LMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
Query: 122 -KQGVSEKAK 130
K+G+
Sbjct: 157 CKEGLRPGDT 166
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 61.0 bits (148), Expect = 5e-10
Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 8 AIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLC 66
A K ++K ++ +NE + L+ ++ + +V++ + + ++L +GGDL
Sbjct: 213 ACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK 272
Query: 67 SFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
I + E + + ++ L+ L + + DLKP+NIL+
Sbjct: 273 FHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 60.6 bits (147), Expect = 5e-10
Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 8 AIKCIDKTKV-SENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL- 65
A K ++K ++ + + E K L +H + IV++ + + +++ +GGD+
Sbjct: 214 ACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIR 273
Query: 66 ---CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
+ + E + + Q+V L+ L + N+ + DLKP+N+L+
Sbjct: 274 YHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 60.1 bits (146), Expect = 6e-10
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 8 AIKCIDKTKV-SENRFDSIVNEIKALKL-LHHQHIVTML-DFLWDERYVYIILEYCDGGD 64
A++ + K V + D + E + +H +V + F + R ++ ++EY +GGD
Sbjct: 81 AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR-LFFVIEYVNGGD 139
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLA--GL 121
L ++ KL E + + ++ LAL +L E + + DLK N+L+ + +KL G+
Sbjct: 140 LMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
Query: 122 -KQGVSEKAK 130
K+G+
Sbjct: 200 CKEGLRPGDT 209
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 59.6 bits (145), Expect = 6e-10
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 8 AIKCIDKTKVSENR-FDSIVNEIKAL-KLLHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A+K + K + + + I++E L K + H +V + +Y +L+Y +GG+L
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL- 121
++ E + + + ++ AL +L N+ + DLKP+NIL+ + L GL
Sbjct: 127 FYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLC 186
Query: 122 KQGVSEKAK 130
K+ + +
Sbjct: 187 KENIEHNST 195
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 59.1 bits (144), Expect = 9e-10
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 8 AIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCS 67
A+K + K + E L ++H IV + E +Y+IL++ GGDL +
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 115
Query: 68 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GL-KQ 123
+ +E + ++ +L LAL L + + DLKP+NIL+ + +KL GL K+
Sbjct: 116 RLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175
Query: 124 GVSEKAK 130
+ + K
Sbjct: 176 SIDHEKK 182
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 58.8 bits (143), Expect = 1e-09
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKL-LHHQHIVTML-DFLWDERYVYIILEYCDGGD 64
A+K + K + ++ + + E + L L +H + + F +R ++ ++E+ +GGD
Sbjct: 52 AVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR-LFFVMEFVNGGD 110
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLA--GL 121
L I+ + E + + + +++ AL FL + + + DLK N+L+ + KLA G+
Sbjct: 111 LMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM 170
Query: 122 -KQGVSEKAK 130
K+G+
Sbjct: 171 CKEGICNGVT 180
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 58.6 bits (142), Expect = 1e-09
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQ------HIVTMLDFLWDERYVYIIL 57
VAIK I K + + E++ L+L++ +IV + ++ ++
Sbjct: 79 QEWVAIKII---KNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVF 135
Query: 58 EYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLREN--NVCHFDLKPQNILIKN 113
E +L +R+ +S ++F +Q+ AL FL ++ H DLKP+NIL+ N
Sbjct: 136 EML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN 194
Query: 114 ---NTLKL 118
+ +K+
Sbjct: 195 PKRSAIKI 202
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 58.9 bits (142), Expect = 1e-09
Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 12/129 (9%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEY---- 59
EV + + ++ + + I L+ M+ DER ++++ +
Sbjct: 126 KEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYP 185
Query: 60 ---CDGGD----LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 111
+ L S +H+ L Q Q++ L L + H L+P +I++
Sbjct: 186 RMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD 245
Query: 112 KNNTLKLAG 120
+ + L G
Sbjct: 246 QRGGVFLTG 254
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 58.5 bits (142), Expect = 2e-09
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQ------HIVTMLDFLWDERYVYIIL 57
++VA+K I + ++ EI LK + + V M D+ ++ I
Sbjct: 45 KSQVALKII---RNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAF 101
Query: 58 EYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT 115
E G + F++ + + QL AL+FL EN + H DLKP+NIL N+
Sbjct: 102 ELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSE 160
Query: 116 -LKLAGLKQGVSEKAKGSAYIEQGNTKVI---CSVFEPREIPS 154
L + EK+ + I +V + F+ +
Sbjct: 161 FETLYNEHKSCEEKSVKNTSI-----RVADFGSATFDHEHHTT 198
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 57.2 bits (139), Expect = 4e-09
Identities = 28/127 (22%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 8 AIKCIDKTK-VSENRFDSIVNEIKALKL-LHHQHIVTML-DFLWDERYVYIILEYCDGGD 64
A+K + K + ++ + + E + L L + + F +R +Y ++EY +GGD
Sbjct: 49 AVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR-LYFVMEYVNGGD 107
Query: 65 LCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLA--GL 121
L I+ + E + ++ + L FL+ + + DLK N+++ + +K+A G+
Sbjct: 108 LMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
Query: 122 -KQGVSE 127
K+ + +
Sbjct: 168 CKENIWD 174
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression,
transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB:
1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Length = 127
Score = 53.4 bits (129), Expect = 5e-09
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKIL--DITPEAFSTMLD 416
D V ++F+AHK +L S +F ++F +L L +I PE F+ +LD
Sbjct: 31 DVVIVVSR----EQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLD 86
Query: 417 SDHHARVNISSD 428
+ +R+N+
Sbjct: 87 FMYTSRLNLREG 98
>2nn6_A Polymyositis/scleroderma autoantigen 1; RNA, exosome, PM/SCL,
phosphorolytic, hydrolase/transferase complex; 3.35A
{Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Length = 358
Score = 56.6 bits (136), Expect = 6e-09
Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 13/132 (9%)
Query: 128 KAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFASQIRTGWLR 187
G +E G T+V+ V P + ++G L+ + + A+ +
Sbjct: 58 TDYGCCIVELGKTRVLGQVSCELVSPKLNRA-----TEGILFFNLELSQMAAPAFEPGRQ 112
Query: 188 DSEEKELGNHLKRALEPAVC--------RHEFSNFQVDLFVLVLQNDGSALSAAINCANL 239
+L ++R L + C +Q+ + + +L +DG+ + AA A +
Sbjct: 113 SDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIV 172
Query: 240 ALVDAAIPMYDL 251
AL P +
Sbjct: 173 ALCHFRRPDVSV 184
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 57.3 bits (138), Expect = 6e-09
Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 8 AIKCIDKTKV-SENRFDSIVNEIKALKL-LHHQHIVTMLDFLWDERYVYIILEYCDGGDL 65
A+K + K V ++ + + E + L L + + +Y ++EY +GGDL
Sbjct: 370 AVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL 429
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLA--GL- 121
I+ + E + ++ + L FL+ + + DLK N+++ + +K+A G+
Sbjct: 430 MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC 489
Query: 122 KQGVSEKAK 130
K+ + +
Sbjct: 490 KENIWDGVT 498
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 55.9 bits (135), Expect = 1e-08
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 22/130 (16%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-----------HQHIVTMLD-FLW--- 48
+T VA+K + + + ++ +EIK L+ ++ HI+ +LD F
Sbjct: 44 NTHVAMKIV---RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP 100
Query: 49 DERYVYIILEYCDGGDLCSFIRS--HEKLSEFQCQQFVRQLVLALKFL-RENNVCHFDLK 105
+ +V ++ E G +L + I+ H + +Q +QL+L L ++ R + H D+K
Sbjct: 101 NGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK 159
Query: 106 PQNILIKNNT 115
P+N+L++
Sbjct: 160 PENVLMEIVD 169
>2wp8_A Exosome complex component RRP45; nucleus, hydrolase, RNA-binding,
exonucle binding, mitochondrion, rRNA processing; 3.00A
{Saccharomyces cerevisiae}
Length = 305
Score = 54.7 bits (131), Expect = 2e-08
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 14/133 (10%)
Query: 128 KAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEYQRSKGELYVEFKFAPFAS-QIRTGWL 186
K G ++ GNTKV C + P +G + + +P A Q G +
Sbjct: 42 KEFGDVSVKMGNTKVHCRISCQIAQPYEDRP-----FEGLFVISTEISPMAGSQFENGNI 96
Query: 187 RDSEEKELGNHLKRALEPAVC--------RHEFSNFQVDLFVLVLQNDGSALSAAINCAN 238
+E +++++ + + V V L DG + A+
Sbjct: 97 TGEDEVLCSRIIEKSVRRSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVM 156
Query: 239 LALVDAAIPMYDL 251
L+ P +
Sbjct: 157 AGLMHFKKPDITV 169
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding,
alternative splicing, zinc, nucleus, BTB domain,
zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Length = 116
Score = 49.9 bits (120), Expect = 6e-08
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKILDITPEAFSTMLD 416
DC +G +FKAH+ +L+ S F ++ + + F +L+
Sbjct: 24 DCTIVIGE----FQFKAHRNVLASFSEYFGAIYRSTSENNVFLDQSQVKADGFQKLLE 77
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo
sapiens} PDB: 3ohv_A
Length = 125
Score = 49.9 bits (120), Expect = 7e-08
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKIL-DITPEAFSTMLDS 417
D V KEF+AH+ +L+ S F G+ + ++T F +L
Sbjct: 34 DVTLIVER----KEFRAHRAVLAACSEYFWQALVGQTKNDLVVSLPEEVTARGFGPLLQF 89
Query: 418 DHHARVNISSD 428
+ A++ +S +
Sbjct: 90 AYTAKLLLSRE 100
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK,
proto oncogene, transcription F transcription; 2.00A
{Homo sapiens} PDB: 2nn2_A
Length = 120
Score = 49.9 bits (120), Expect = 7e-08
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 6/60 (10%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKIL--DITPEAFSTMLD 416
D V +EF H+ +L+ S F +F ++ EA + ++D
Sbjct: 27 DVVILVEG----REFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMD 82
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond,
activator, DNA-binding, nucleus, phosphorylation,
repressor; 2.50A {Mus musculus}
Length = 138
Score = 47.3 bits (113), Expect = 8e-07
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGEL-CEKGDTKILDITPEAFSTMLDS 417
D V + F+AH+ +L+ S F + G+ E T ++T + F ++
Sbjct: 38 DVTVLVEG----QRFRAHRSVLAACSSYFHSRIVGQTDAELTVTLPEEVTVKGFEPLIQF 93
Query: 418 DHHARVNISSD 428
+ A++ +S D
Sbjct: 94 AYTAKLILSKD 104
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote;
protein-protein interaction domain, transcriptional
represso finger protein; 1.90A {Homo sapiens} SCOP:
d.42.1.1 PDB: 1cs3_A
Length = 121
Score = 46.4 bits (111), Expect = 1e-06
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKILDITPEAFSTMLDSD 418
D V + +EF AH+ +L+ +S +F +FH + ++P+ F +L+
Sbjct: 30 DVVIMVDS----QEFHAHRTVLACTSKMFEILFHRNSQH---YTLDFLSPKTFQQILEYA 82
Query: 419 HHARVNISSD 428
+ A + ++
Sbjct: 83 YTATLQAKAE 92
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain,
phosphoprotein, repressor, transcri transcription
regulation; 2.10A {Homo sapiens}
Length = 129
Score = 46.5 bits (111), Expect = 1e-06
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKILDITPEAFSTMLDSD 418
D V FKAH+ +L+ SS F +F+ + + P++F +L
Sbjct: 35 DVSVVVKG----HAFKAHRAVLAASSSYFRDLFNNSRSAVVELPA-AVQPQSFQQILSFC 89
Query: 419 HHARVNISSD 428
+ R++++
Sbjct: 90 YTGRLSMNVG 99
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 48.7 bits (115), Expect = 2e-06
Identities = 37/161 (22%), Positives = 55/161 (34%), Gaps = 49/161 (30%)
Query: 4 HTEVAIKCI------DKTKVSENRFDSIVNEIKALKL-----------------LHHQHI 40
HT VAIK I + F+ I+ EI K L+ H
Sbjct: 43 HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHC 102
Query: 41 VT-----MLDFLWD-----------------ERYVYIILEYCDGG-DLCSFIRSHEKLSE 77
V +L WD + ++I+LE+ GG DL + S
Sbjct: 103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSL 160
Query: 78 FQCQQFVRQLVLALKFLREN-NVCHFDLKPQNILIKNNTLK 117
+ + QL +L + H DL N+L+K +LK
Sbjct: 161 ATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLK 201
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC
domain,transcription factor, protein-PROT interaction;
2.44A {Homo sapiens}
Length = 124
Score = 45.7 bits (109), Expect = 2e-06
Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGEL-CEKGDTKILDITPEAFSTMLDS 417
D +V + F+AH+ +L+ S F + G+ E T ++T + F ++
Sbjct: 31 DVTIFVEG----QRFRAHRSVLAACSSYFHSRIVGQADGELNITLPEEVTVKGFEPLIQF 86
Query: 418 DHHARVNISSD 428
+ A++ +S +
Sbjct: 87 AYTAKLILSKE 97
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics,
struct genomics consortium, SGC, structural protein;
2.40A {Homo sapiens}
Length = 144
Score = 45.8 bits (109), Expect = 4e-06
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 8/74 (10%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTK----ILDITPEAFSTM 414
D + +E K IL+ +SP T + + + + I+ +
Sbjct: 49 DAHLVLDG----EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREI 104
Query: 415 LDSDHHARVNISSD 428
LD ++ ++ D
Sbjct: 105 LDYIFSGQIRLNED 118
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related
zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene;
1.74A {Homo sapiens}
Length = 119
Score = 44.5 bits (106), Expect = 5e-06
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKILDITPEAFSTMLDSD 418
D VG FKAH +L+ S F +++ + E F +LD
Sbjct: 26 DATLDVGG----LVFKAHWSVLACCSHFFQSLYGDGSGGS--VVLPAGFAEIFGLLLDFF 79
Query: 419 HHARVNISSD 428
+ + ++S
Sbjct: 80 YTGHLALTSG 89
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 47.6 bits (113), Expect = 5e-06
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH--------HQHIVTMLD-FLWD-- 49
+ VA+K + K +E+ ++ ++EI+ LK + + +V +LD F
Sbjct: 59 IQGKKFVAMKVV---KSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115
Query: 50 -ERYVYIILEYCDGGDLCSFIRS--HEKLSEFQCQQFVRQLVLALKFL-RENNVCHFDLK 105
++ ++ E G L +I ++ L ++ ++Q++ L +L + + H D+K
Sbjct: 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIK 174
Query: 106 PQNILIKNN 114
P+NIL+ N
Sbjct: 175 PENILLSVN 183
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3,
structural genomics, NPPSFA; 2.60A {Mus musculus}
Length = 135
Score = 44.5 bits (106), Expect = 7e-06
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKILDITPEAFSTMLDSD 418
D VG FKAH +L+ S F ++ + E F +LD
Sbjct: 27 DATLDVGG----LVFKAHWSVLACCSHFFQRIYGDGTGGS--VVLPAGFAEIFGLLLDFF 80
Query: 419 HHARVNISSD 428
+ + ++S
Sbjct: 81 YTGHLALTSG 90
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 47.5 bits (112), Expect = 7e-06
Identities = 83/518 (16%), Positives = 147/518 (28%), Gaps = 142/518 (27%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGD 64
T VA+ KV + + D +I L L + T+L+ L I + D
Sbjct: 164 TWVALDVCLSYKV-QCKMD---FKIFWLNLKNCNSPETVLEMLQK-LLYQIDPNWTSRSD 218
Query: 65 LCSFIRSH-----EKLSEFQCQQFVRQLVLALKFLRENNVCH------FDLKPQNILI-- 111
S I+ +L + L L NV + F+L + IL+
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKS---KPYENCLLVLL--NVQNAKAWNAFNLSCK-ILLTT 272
Query: 112 --KNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVF---EPREIPSS--KTSLEYQRS 164
K T L+ S + K + + P+++P T+
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----- 327
Query: 165 KGELYVEFKFAPFASQIRTG---W--LRDSEEKELGNHLK---RALEPAVCRHEFSNFQV 216
+ + A IR G W + +L ++ LEPA R F
Sbjct: 328 -------RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF----D 376
Query: 217 DLFVLVLQNDGSALSAAINCANLALVDAAIPMYDLVTSSTLA-LRGGLTFIDPVEEEVAY 275
L V A IP + L+ + + D V
Sbjct: 377 RLSVF---PP----------------SAHIP------TILLSLIWFDVIKSDV-MVVVNK 410
Query: 276 CQSLSSSE-DDDSGVITLSYMSVIQQVTQVTLVGTIQQERLADHIEQLIGCCESLCTDRV 334
S E I++ I +V L + A H ++
Sbjct: 411 LHKYSLVEKQPKESTISI-PS--IYLELKVKL-----ENEYALH-RSIVDHYNIP----- 456
Query: 335 QKLVSDHVTLPERGRYVLNSGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVF------- 387
+ SD + P +Y + ++G+ H K + + + VF
Sbjct: 457 KTFDSDDLIPPYLDQYFYS---------HIGH--HLKNIEHPERMTLFRM-VFLDFRFLE 504
Query: 388 ATMFHGELCEKGDTKILDITP-----EAFSTMLDSDHHARVNISSD---HHARVSISSDH 439
+ H IL+ + + D + VN D I S +
Sbjct: 505 QKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKY 564
Query: 440 HTRVSISSDHRARVSISSDHHVRVSISSDHHARYIMAY 477
T + +R+++ ++ A + A+
Sbjct: 565 -TDL-----------------LRIALMAEDEAIFEEAH 584
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo
sapiens} PDB: 3m52_A
Length = 119
Score = 43.8 bits (104), Expect = 1e-05
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKILDITPEAFSTMLDSD 418
DC F V FKAHK +L+ S F +F +K + +L+
Sbjct: 29 DCTFVVDG----VHFKAHKAVLAACSEYFKMLFVD---QKDVVHLDISNAAGLGQVLEFM 81
Query: 419 HHARVNISSD 428
+ A++++S +
Sbjct: 82 YTAKLSLSPE 91
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC,
structural genomics consortium, kelch repeat, secreted,
protein binding; 2.60A {Homo sapiens}
Length = 279
Score = 45.3 bits (108), Expect = 2e-05
Identities = 11/73 (15%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 364 VGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKI--------LDITPEAFSTML 415
+EF+AH+ +L+ ++ F + G+ E ++ P+ ++
Sbjct: 38 CFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVI 97
Query: 416 DSDHHARVNISSD 428
+ + R+ +S+
Sbjct: 98 EYMYTGRIRVSTG 110
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain
containing 33, kaiso transcriptio ZNF-kaiso,
ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB:
3m4t_A 3m8v_A
Length = 116
Score = 42.7 bits (101), Expect = 3e-05
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 354 SGLWSDCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKILDITPEAFST 413
GL+ D V + ++F+AHK ILS SS F +F ++ I E F+
Sbjct: 28 HGLFCDVTVIVED----RKFRAHKNILSASSTYFHQLFSV---AGQVVELSFIRAEIFAE 80
Query: 414 MLD 416
+L+
Sbjct: 81 ILN 83
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 44.9 bits (106), Expect = 3e-05
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL-HHQHIVTML-DFLWDERYVYIILE 58
VA+K + K + + ++++E+K L + HH ++V +L + +I+E
Sbjct: 49 TATCRTVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 107
Query: 59 YCDGGDLCSFIRSH 72
+C G+L +++RS
Sbjct: 108 FCKFGNLSTYLRSK 121
Score = 30.7 bits (69), Expect = 1.2
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 66 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLA--GLK 122
+ L+ + Q+ ++FL H DL +NIL+ + N +K+ GL
Sbjct: 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 240
Query: 123 QGVSEKAKGSAYIEQGNTKV 142
+ + K Y+ +G+ ++
Sbjct: 241 RDIY---KDPDYVRKGDARL 257
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain,
BTB/POZ domain, ZBTB32, zinc finger domain-containing
protein 32; 2.00A {Homo sapiens}
Length = 119
Score = 41.9 bits (99), Expect = 4e-05
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 11/70 (15%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMFHGELCEKGDTKILDITPEAFSTMLDSD 418
D VG+ +EF AH L+L+ S L E I+P F+ +L+
Sbjct: 32 DTLITVGS----QEFPAHSLVLAGVSQQLGRRGQWALGE-------GISPSTFAQLLNFV 80
Query: 419 HHARVNISSD 428
+ V +
Sbjct: 81 YGESVELQPG 90
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation,
kelch repeat, neurodegeneration, phosphoprotein,
polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB:
3hve_B
Length = 256
Score = 43.0 bits (102), Expect = 9e-05
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 8/62 (12%)
Query: 359 DCKFYVGNDVHCKEFKAHKLILSMSSPVFATMF--HGELCEKGDTKIL--DITPEAFSTM 414
D + +E K IL+ +SP T + + KI I+ +
Sbjct: 33 DAHLVLDG----EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREI 88
Query: 415 LD 416
LD
Sbjct: 89 LD 90
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 41.2 bits (97), Expect = 5e-04
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH-QHIVTMLDFLWDERYVYIILEYCDG 62
+ VAIK ++ K +R + E + K L I + F +Y ++LE G
Sbjct: 34 NEYVAIK-LEPMK---SRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-G 88
Query: 63 GDLCS-FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L F S QL+ ++++ N+ + D+KP+N LI
Sbjct: 89 PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI 138
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 41.1 bits (96), Expect = 7e-04
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 21/117 (17%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLH-HQHIVTMLDFLWDERYVYIILEYCDG 62
+ EVAIK + + + ++ E K ++L I + F + Y ++++ G
Sbjct: 32 NEEVAIKLENV----KTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-G 86
Query: 63 GDLCSFIRSHEKLSEFQCQQF--------VRQLVLALKFLRENNVCHFDLKPQNILI 111
L E L F ++ Q++ ++F+ + H D+KP N L+
Sbjct: 87 PSL-------EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLM 136
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 40.4 bits (95), Expect = 8e-04
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 9/111 (8%)
Query: 4 HTEVAIKC-IDKTKVSENRFDSIVNEIKALKLLHH-QHIVTMLDFLWDERYVYIILEYCD 61
EVAIK KTK + E K K++ I T+ + Y +++E
Sbjct: 34 GEEVAIKLECVKTKHP-----QLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87
Query: 62 GGDLCS-FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
G L F K S Q++ ++++ N H D+KP N L+
Sbjct: 88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM 138
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 38.9 bits (91), Expect = 0.003
Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHH-QHIVTMLDFLWDERYVYIILEYCDG 62
+ +VAIK + + + + +E + KLL I + F + + ++++ G
Sbjct: 35 NQQVAIKF-EPRR---SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-G 89
Query: 63 GDLCS-FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 111
L K S +Q++ ++ + E ++ + D+KP N LI
Sbjct: 90 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 139
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 37.4 bits (87), Expect = 0.008
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 12/122 (9%)
Query: 1 NEQHTEVAIKC--IDKTKVSENRF------DSIVNEIKALKLLHHQHIVTMLDF-LWDER 51
Q + ++K D +E F VN+ K L I T + F + ++
Sbjct: 72 GPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDK 131
Query: 52 YVYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 109
Y +++L G L S + LSE Q +L+ AL+FL EN H ++ +NI
Sbjct: 132 YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI 190
Query: 110 LI 111
+
Sbjct: 191 FV 192
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 37.2 bits (87), Expect = 0.009
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 21/130 (16%)
Query: 5 TEVAIKCIDKTKVSENR-FDSIVNEIKALKLLHHQHIVTMLDFLWDERY---VYIILEYC 60
+VA+K F EI+ L H H+V+++ F + +Y +Y
Sbjct: 64 AKVALKRRTPESSQGIEEF---ETEIETLSFCRHPHLVSLIGFCDERNEMILIY---KYM 117
Query: 61 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLA------LKFLRENNVCHFDLKPQNILI-KN 113
+ G+L + + + ++L + L +L + H D+K NIL+ +N
Sbjct: 118 ENGNLKRHL--YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN 175
Query: 114 NTLKLA--GL 121
K+ G+
Sbjct: 176 FVPKITDFGI 185
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 37.0 bits (86), Expect = 0.010
Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 23/127 (18%)
Query: 4 HTEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD------------FLW--- 48
+ A + K + EN + +E+K + + + + F
Sbjct: 62 PEKDARHVV-KVEYQENG--PLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL 118
Query: 49 ----DERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDL 104
Y ++++E G DL + + Q +++ L+++ EN H D+
Sbjct: 119 TEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDI 177
Query: 105 KPQNILI 111
K N+L+
Sbjct: 178 KAANLLL 184
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 35.5 bits (82), Expect = 0.034
Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 21/127 (16%)
Query: 5 TEVAIKCIDKTKVSENRFDSIVNEIKALKLLHHQHIVTMLD------------FLW---- 48
V KV + + E+K + + +
Sbjct: 60 ESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119
Query: 49 ---DERYVYIILEYCDGGDLCS-FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDL 104
+ Y ++I++ G DL + + ++ S Q +++ L+++ E+ H D+
Sbjct: 120 DKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDI 178
Query: 105 KPQNILI 111
K N+L+
Sbjct: 179 KASNLLL 185
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase,
structural genomics consortium, SGC, hemicholinium-3,
alternative splicing, cytoplasm; HET: ADP HC6; 1.70A
{Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A
2ckp_A* 2ckq_A*
Length = 401
Score = 33.5 bits (75), Expect = 0.16
Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 30 KALKLLHHQHI--VTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVR 85
+ + H + +L+ E+Y+ +L + S I+ KL + +
Sbjct: 174 EKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE--SRIKKLHKLLSYNLPLELE 231
Query: 86 QLVLALKFLRENNV-CHFDLKPQNILIKNN 114
L L+ V CH D + NIL+
Sbjct: 232 NLRSLLESTPSPVVFCHNDCQEGNILLLEG 261
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 32.5 bits (75), Expect = 0.28
Identities = 29/128 (22%), Positives = 41/128 (32%), Gaps = 39/128 (30%)
Query: 5 TEVAIKCIDKTKVSENR-----FDSIVNEIKALKLLHHQHIVTMLDFLWDERY---VYII 56
T VA+K + F EIK + H+++V +L F D VY
Sbjct: 55 TTVAVKKLAAMVDITTEELKQQF---DQEIKVMAKCQHENLVELLGFSSDGDDLCLVY-- 109
Query: 57 LEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVL--------------ALKFLRENNVCHF 102
Y G L + + L + FL EN+ H
Sbjct: 110 -VYMPNGSLLDRLSCLDG-----------TPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 103 DLKPQNIL 110
D+K NIL
Sbjct: 158 DIKSANIL 165
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR
genomics, joint center for structural genomics, JCSG,
prote structure initiative; HET: MSE; 2.55A
{Mesorhizobium loti}
Length = 301
Score = 32.4 bits (73), Expect = 0.29
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 10/102 (9%)
Query: 19 ENRFDSIVNEIKALKLLHHQHIVTMLDF-LWDERYVYIILEYCDGGDLCSFIRSHEKLSE 77
+ R S +A + LH V F L+ Y+ + L + +
Sbjct: 101 KTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVRE-- 158
Query: 78 FQCQQFVRQLVLALKFLRENNV-CHFDLKPQNILIKNNTLKL 118
+ AL CH D +N L + +
Sbjct: 159 ------AGGVRSALAAHPLPLAACHCDPLCENFLDTGERMWI 194
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 31.8 bits (72), Expect = 0.44
Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 11/99 (11%)
Query: 28 EIKALKLLHHQHIVTMLDFLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQL 87
E +AL+ L + + + +++E D +L + + + +
Sbjct: 154 EFRALQKLQGLAVPKVYAW----EGNAVLMELIDAKELYRVRVENP-------DEVLDMI 202
Query: 88 VLALKFLRENNVCHFDLKPQNILIKNNTLKLAGLKQGVS 126
+ + + H DL N+L+ + + Q V
Sbjct: 203 LEEVAKFYHRGIVHGDLSQYNVLVSEEGIWIIDFPQSVE 241
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 30.7 bits (68), Expect = 0.51
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 20/49 (40%)
Query: 191 EKELGNHLKRALEPAVCRHEFSNFQVDLFVLVLQNDGSALSAAINCANL 239
EK+ LK+ L+ ++ + L+ D SA + AI A +
Sbjct: 18 EKQ---ALKK-LQ--------ASLK--LYA-----DDSAPALAIK-ATM 46
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 28.9 bits (64), Expect = 2.5
Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 12/58 (20%)
Query: 311 QQERLADHIEQLIGCCESLCTDRVQKLVSDHVTLPERGRYVLNSGLWSDCKFYVGNDV 368
R + L C E C K+V G V + C + + +
Sbjct: 11 AGRRGPNLNIVLT-CPE--CKVYPPKIVERF----SEGDVVC-----ALCGLVLSDKL 56
>2q83_A YTAA protein; 2635576, structural genomics, joint center for
structu genomics, JCSG, protein structure initiative,
PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus
subtilis}
Length = 346
Score = 28.8 bits (64), Expect = 3.7
Identities = 19/129 (14%), Positives = 34/129 (26%), Gaps = 24/129 (18%)
Query: 10 KCIDKTKVSENRFDSIVNEIKALKLLHH-----QHIVTMLDFLWDERYVYIILEYCDGGD 64
I+ + +K L H Q + F R+ + C +
Sbjct: 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQME 170
Query: 65 LCSFIRSHEKLSEF------QCQQFVRQLVLALKFLRENN-------------VCHFDLK 105
+ EK F + F+ + L ++ +CH D
Sbjct: 171 TWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYG 230
Query: 106 PQNILIKNN 114
N L+ N
Sbjct: 231 TGNTLLGEN 239
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase
activation, cytochrome C, procaspase-9, A nucleotide,
cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A*
3iyt_A* 3iza_A*
Length = 1249
Score = 28.6 bits (64), Expect = 5.9
Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 10/48 (20%)
Query: 426 SSDHHARV----------SISSDHHTRVSISSDHRARVSISSDHHVRV 463
S D RV +I V + +++ + +++
Sbjct: 901 SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQL 948
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117,
NESG, structural genomics, PSI-2, protein structure
initiative; 2.25A {Corynebacterium glutamicum}
Length = 221
Score = 28.1 bits (63), Expect = 6.3
Identities = 5/35 (14%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 1 NEQHTEVAIKCIDKTKVSENRFDSIVNEIKALKLL 35
+H A + S +R +++ + L ++
Sbjct: 90 ESEHQRQAKALFREAGYSPSRVRFLLS--RPLDVM 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase,
spliceosome, DNA damage, D repair, mRNA processing,
nucleus; 2.60A {Saccharomyces cerevisiae}
Length = 343
Score = 27.8 bits (61), Expect = 7.8
Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 6/80 (7%)
Query: 396 CEKGDTKILDITPEAFSTMLDSDHHARVNISSDHHARVSISSDHHTRVSISSDHRARV-S 454
CE G + T + + + + H + + + + ++ +
Sbjct: 55 CEDGALHFTQLKDSKTITTITTPNP----RTGGEHPAIISRGPCNRLLLLYPGNQITILD 110
Query: 455 ISSDHHVRVSISSDHHARYI 474
++ +R I D I
Sbjct: 111 SKTNKVLR-EIEVDSANEII 129
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics
consortium, transferase; 2.41A {Plasmodium vivax}
Length = 458
Score = 27.8 bits (60), Expect = 8.2
Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 4/120 (3%)
Query: 46 FLWDERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN----VCH 101
FLW+ + Y L + +CSF L +V + N +CH
Sbjct: 235 FLWNTIWKYFHLLNEERKKICSFDAKANILKLIDFDVLRDSIVEVESLCKRENSPIVLCH 294
Query: 102 FDLKPQNILIKNNTLKLAGLKQGVSEKAKGSAYIEQGNTKVICSVFEPREIPSSKTSLEY 161
DL NI+ + L + G + + S EY
Sbjct: 295 CDLLSSNIINTVGGGEAGELGEAGETGEGGETGEGGETGEGGETGEGGEGDSISFIDFEY 354
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase,
structural genomics CONS SGC, hemicholinium-3,
phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens}
PDB: 3lq3_A* 2ig7_A*
Length = 379
Score = 27.5 bits (60), Expect = 9.5
Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 10/90 (11%)
Query: 30 KALKLLH--HQHIVTMLDFLWD--ERYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVR 85
+ H +L+ ERY+ I + + + L + + +
Sbjct: 153 TKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLP-----PTGLPEMNLLEMYSLKDEMG 207
Query: 86 QLVLALKFLRENNV-CHFDLKPQNILIKNN 114
L L+ V CH D++ NIL+ +
Sbjct: 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSE 237
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.134 0.392
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,153,902
Number of extensions: 422592
Number of successful extensions: 1587
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1205
Number of HSP's successfully gapped: 308
Length of query: 477
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 380
Effective length of database: 3,993,456
Effective search space: 1517513280
Effective search space used: 1517513280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (26.6 bits)