BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy651
(412 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q75WF2|DNA2_ACAPL Plancitoxin-1 OS=Acanthaster planci PE=1 SV=1
Length = 358
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 171/372 (45%), Gaps = 46/372 (12%)
Query: 43 IQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVS-SEDVKRFEEGKKKATEHKL 101
+ C+D N PVDW I YKLP+ +S ++ G MY+ + +F K +H +
Sbjct: 27 VSCMDNKNKPVDWFIVYKLPQDSASSKPVIREGYGQMYMDVNNQALKFSSTSLKDDDHAI 86
Query: 102 NKRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTPIRTTVK---FGHS 158
Y + Y + ++YNDQ P ++ GH+
Sbjct: 87 ---------------------AYTVDDIYKNHGKGNLAHVMYNDQPPAGEEIQSGLVGHT 125
Query: 159 KGLVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDNLG 218
KG++ + G W+VHSVP F + SY +P GQ LC++ Q + +G L
Sbjct: 126 KGVLAFDGTSGFWLVHSVPKFPLPASKSYNWPDNAKRNGQTLLCITFKYDQFEKIGQQLK 185
Query: 219 HNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFAKTREL 278
+N Y + L + G P++ ++ + TS Q + ++ Q F +F K +
Sbjct: 186 YNYPGVYDSDLPSKLVGKTPSIVDLVKNVHVTSPPWNRQLNLQSKSGQT-FVSFNKASKW 244
Query: 279 GDDLYKR-ISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVVEFRSTHDH 337
G+DLYK ++ + L ETW NG L + CE+ V NV+ V+LSG +F+ T DH
Sbjct: 245 GEDLYKNWLATHFKSGLYCETWQNGGRNLNSSCEA-GLNVYNVKKVSLSGGSDFKGTKDH 303
Query: 338 AKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNEALWS 397
+KW ++ T+S L + C G INR Q+ RGGG+VC++N +
Sbjct: 304 SKWAVT----TKSGLK--------------WTCIGGINRQTSQMYRGGGAVCLENANVHK 345
Query: 398 LYHSIISAVEPC 409
++ ++ EPC
Sbjct: 346 AFYDSVAEYEPC 357
>sp|O62855|DNS2A_PIG Deoxyribonuclease-2-alpha OS=Sus scrofa GN=DNASE2 PE=1 SV=1
Length = 364
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 169/382 (44%), Gaps = 53/382 (13%)
Query: 39 PNTLIQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATE 98
P + C ++ PVDW + YKLP HSSP + +G Y Y+ E
Sbjct: 16 PVGTLTCYGDSGQPVDWFVVYKLP-AHSSPGDVAQSGLRYKYLDEESG------------ 62
Query: 99 HKLNKRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTP----IRTTVK 154
R+ +N G+ L P N S +LYNDQ P + +
Sbjct: 63 ---GWRDGAGSINSSTGALGRSLLPLYRNTSQL-------AFLLYNDQPPKYRGSQHSSN 112
Query: 155 FGHSKGLVVGNSRGGIWIVHSVPHFVDDSQTS-YTYPHTGLMYGQNFLCLSLNASQLDSV 213
GH+KG+++ + GG W++HSVP+F S ++ Y++P + YGQ +C+S +Q ++
Sbjct: 113 RGHTKGVLLLDQEGGFWLIHSVPNFPPPSSSAAYSWPPSARTYGQTLICVSFPLTQFLNI 172
Query: 214 GDNLGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFA 273
L + Y L FP L V+ G + + + S T F +FA
Sbjct: 173 SRQLTYTYPMVYDYKLEGDFARKFPYLEEVVKGHHVLQ-EPWNSSVTLTSKAGASFQSFA 231
Query: 274 KTRELGDDLYK-RISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVV--E 330
K GDDLY +++ L NL V+ W G L ++C H V++V +A G
Sbjct: 232 KCGNFGDDLYSGWLAEALGSNLQVQFWQRSAGILPSNCSGVQH-VLDVTQIAFPGPAGPN 290
Query: 331 FRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCI 390
F +T DH+KW ++ R + C GD+NR + + RGGG++C
Sbjct: 291 FNATEDHSKWCVA--------------------PERPWTCVGDMNRNKREEHRGGGTLCA 330
Query: 391 DNEALWSLYHSIISAVEPCPRE 412
ALW + ++ A EPC +E
Sbjct: 331 QLPALWKAFKPLVKAWEPCEKE 352
>sp|Q9QZK8|DNS2A_RAT Deoxyribonuclease-2-alpha OS=Rattus norvegicus GN=Dnase2 PE=2 SV=1
Length = 350
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 170/379 (44%), Gaps = 60/379 (15%)
Query: 43 IQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATEHKLN 102
+ C ++ PVDW + YKLP +S G Y Y+ EG + H
Sbjct: 20 LSCYGDSGRPVDWFVVYKLP-ANSGSGDKPWKGLMYKYMDQN-----SEGWQDGVGH--- 70
Query: 103 KRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTP----IRTTVKFGHS 158
++ D G L P S F +LYNDQ P + + GH+
Sbjct: 71 -------IDSKDGAVGLTLQPLYQKNSSQLAF------LLYNDQPPKSSSAQDSSSRGHT 117
Query: 159 KGLVVGNSRGGIWIVHSVPHFVDDSQT-SYTYPHTGLMYGQNFLCLSLNASQLDSVGDNL 217
KG+++ + GG W+VHSVP F + + +Y++P YGQ LC+SL SQ +G L
Sbjct: 118 KGVLLLDQEGGFWLVHSVPRFPSPASSGAYSWPPNARTYGQTLLCVSLPFSQFPGIGKQL 177
Query: 218 GHNQIYKYSTFLSAGNKGVF----PTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFA 273
Y Y +G+F P L V G + + + S I T F +FA
Sbjct: 178 ----TYTYPLVYDHKLEGIFAQKLPDLEEVTKGHHVLR-EPWNSSVILTSRAGTTFQSFA 232
Query: 274 KTRELGDDLYK-RISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVV--E 330
K + GDDLY ++ L NL V+ WPN PG L ++C S H++++V G
Sbjct: 233 KFGKFGDDLYSGWLAAALGTNLQVQFWPNSPGILPSNC-SGTHKILDVTETGFPGPSGPT 291
Query: 331 FRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCI 390
F +T DH+KW ++ +G +VC GD+NR + + RGGG++C
Sbjct: 292 FNATEDHSKWCVA------------------PEGP--WVCVGDMNRNKRETHRGGGTLCT 331
Query: 391 DNEALWSLYHSIISAVEPC 409
ALW + S++ A +PC
Sbjct: 332 QVPALWKAFRSLVKACKPC 350
>sp|O00115|DNS2A_HUMAN Deoxyribonuclease-2-alpha OS=Homo sapiens GN=DNASE2 PE=1 SV=2
Length = 360
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 168/379 (44%), Gaps = 52/379 (13%)
Query: 39 PNTLIQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATE 98
P + C ++ PVDW + YKLP + S G Y Y+ E
Sbjct: 13 PAGALTCYGDSGQPVDWFVVYKLPALRGS-GEAAQRGLQYKYLD---------------E 56
Query: 99 HKLNKRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTPIRTTVK---- 154
R+ +N + G+ L P + + F +LYNDQ P + +
Sbjct: 57 SSGGWRDGRALINSPEGAVGRSLQPLYRSNTSQLAF------LLYNDQPPQPSKAQDSSM 110
Query: 155 FGHSKGLVVGNSRGGIWIVHSVPHFVDD-SQTSYTYPHTGLMYGQNFLCLSLNASQLDSV 213
GH+KG+++ + GG W+VHSVP+F S +Y++PH+ YGQ LC+S +Q +
Sbjct: 111 RGHTKGVLLLDHDGGFWLVHSVPNFPPPASSAAYSWPHSACTYGQTLLCVSFPFAQFSKM 170
Query: 214 GDNLGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFA 273
G L + + Y+ L FP L V+ G + S + + S T F +FA
Sbjct: 171 GKQLTYTYPWVYNYQLEGIFAQEFPDLENVVKGHH-VSQEPWNSSITLTSQAGAVFQSFA 229
Query: 274 KTRELGDDLYK-RISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVV--E 330
K + GDDLY ++ L NL V+ W G L ++C S +V+NV +A G
Sbjct: 230 KFSKFGDDLYSGWLAAALGTNLQVQFWHKTVGILPSNC-SDIWQVLNVNQIAFPGPAGPS 288
Query: 331 FRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCI 390
F ST DH+KW +S + C GD+NR + + +RGGG++C
Sbjct: 289 FNSTEDHSKWCVSPKGP--------------------WTCVGDMNRNQGEEQRGGGTLCA 328
Query: 391 DNEALWSLYHSIISAVEPC 409
ALW + ++ +PC
Sbjct: 329 QLPALWKAFQPLVKNYQPC 347
>sp|P34387|TG198_CAEEL Cell-death-related nuclease 7 OS=Caenorhabditis elegans GN=crn-7
PE=2 SV=2
Length = 367
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 177/374 (47%), Gaps = 52/374 (13%)
Query: 40 NTLIQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATEH 99
N IQC + VDW + YKLP++ + S G+ ++Y +E
Sbjct: 17 NGKIQCKNMRGKSVDWFVVYKLPKLSGAGTS----GKEFVYFDAES-------------- 58
Query: 100 KLNKRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTPIRTTVKF-GHS 158
+ + +N + G +S +++A + F +Y+D PI++ + GH+
Sbjct: 59 --SDWTRGNDINDPNVAVGATVSQ-VYSADKSNNF-----WFMYSDDDPIKSADSYRGHA 110
Query: 159 KGLVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDNLG 218
KG+ + +S G W++HSVP+F S++YP+T YGQ+F C S+ L + ++
Sbjct: 111 KGVSLFDSTTGFWLIHSVPNF--PPIKSFSYPNTAEKYGQSFFCASMEVQHLTELAEHWK 168
Query: 219 HNQIYKYSTFLSAGNKGVFPTLARVIAGE-YATSGDNFFQSTIFTRFNQIPFHTFAKTRE 277
+ Q Y + FPTL V A + S F+ S + +AK ++
Sbjct: 169 YIQATPYIINIPEKYATRFPTLKNVEAKQSLPRSATQFWISKPIKTVQGVTLMAYAKHKK 228
Query: 278 LGDDLYKR-ISDNLNVNLLVETWPNGPGR-LRTDCESPAHEVMNVEGVALSGVVEFRSTH 335
D++ IS V L VE+W NG G + T C S + + +V + ++G+ F S+
Sbjct: 229 FDGDIWNDLISRQNKVTLAVESWLNGSGDDIHTTCTSTS-QTHDVTEMRVTGL-NFASSK 286
Query: 336 DHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNEAL 395
DH+KW +S N + I VC GD+NR + QLKRGGG++CI N L
Sbjct: 287 DHSKWAVS-------NSQTNPI-----------VCFGDMNRQKSQLKRGGGALCIQNRNL 328
Query: 396 WSLYHSIISAVEPC 409
W LYHS + VEPC
Sbjct: 329 WQLYHSFVIQVEPC 342
>sp|P56542|DNS2A_MOUSE Deoxyribonuclease-2-alpha OS=Mus musculus GN=Dnase2 PE=2 SV=1
Length = 353
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 170/379 (44%), Gaps = 53/379 (13%)
Query: 39 PNTLIQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATE 98
P + C ++ PVDW + YKLP S ++ G Y Y+ ++ +++G
Sbjct: 16 PAEALSCYGDSGQPVDWFVVYKLPAHSGSRDT--PKGLTYKYMD-QNSDGWQDGVGY--- 69
Query: 99 HKLNKRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTP----IRTTVK 154
+N + G+ L P S F +LYNDQ P R +
Sbjct: 70 -----------INSSEGAVGRSLQPLYRKNSSQLAF------LLYNDQPPKSSSARDSTG 112
Query: 155 FGHSKGLVVGNSRGGIWIVHSVPHFVDDSQT-SYTYPHTGLMYGQNFLCLSLNASQLDSV 213
GH+KG+++ + GG W+VHSVP F + + +YT+P +GQ LC+SL +Q +
Sbjct: 113 HGHTKGVLLLDQEGGFWLVHSVPRFPPPASSGAYTWPPNAQTFGQTLLCVSLPFTQFARI 172
Query: 214 GDNLGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFA 273
G L + Y L P L VI ++ + + S I T F +FA
Sbjct: 173 GKQLTYTYPLVYDHKLEGFFAQKLPDLETVIKNQHVLH-EPWNSSVILTSQAGATFQSFA 231
Query: 274 KTRELGDDLYK-RISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGV--VE 330
K + GDDLY +++ L NL V+ W N PG L ++C S A++V++V G +
Sbjct: 232 KFGKFGDDLYSGWLAEALGTNLQVQFWQNSPGILPSNC-SGAYQVLDVTQTGFPGPSRLT 290
Query: 331 FRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCI 390
F +T DH+KW ++ + C GD+NR + + RGGG+VC
Sbjct: 291 FSATEDHSKWCVAPQGP--------------------WACVGDMNRNKAETHRGGGTVCT 330
Query: 391 DNEALWSLYHSIISAVEPC 409
+ W + S++ +PC
Sbjct: 331 QLPSFWKAFQSLVKDWKPC 349
>sp|Q17778|NUC1_CAEEL Deoxyribonuclease-2 OS=Caenorhabditis elegans GN=nuc-1 PE=3 SV=1
Length = 375
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 172/383 (44%), Gaps = 47/383 (12%)
Query: 43 IQCVDENNNPVDWIIFYKLPRIHSSPNSL--VVNGEAYMYVSSEDVKRFEEGKKKATEHK 100
C D++ N VDW YK+P I S+ + G A+ YV DV + +G +
Sbjct: 23 FSCKDQSGNDVDWFAVYKMP-IEKDDGSVTGLAGGVAWYYV---DVNK--KGTLTPSAKT 76
Query: 101 LNKRNK---HEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKI-------LYNDQT--P 148
L+ ++ + DK+ K + ++N S G+K+ +Y++ T
Sbjct: 77 LDDNDQAIAYTLQQYYDKQNDKTIFHVMYNDEPWGSKSTSGIKLEEILSNRVYSNYTHED 136
Query: 149 IRTTVKFGHSKGLVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNAS 208
T+ FGH+KG + + G+W+VHSVP F + T Y YP +G YGQ LC++ +
Sbjct: 137 DSTSTAFGHTKGTIFFDGTSGVWLVHSVPLFPN--PTKYEYPVSGHDYGQTMLCMTFKYA 194
Query: 209 QLDSVGDNLGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTI-FTRFNQI 267
QL S+G L N+ YS+ L LA+ IAG+Y FQS I
Sbjct: 195 QLKSIGTQLFFNRPNIYSSNLPTNMAADNADLAKAIAGQYQKGQP--FQSVIELETMAGY 252
Query: 268 PFHTFAKTRELGDDLYKR-ISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALS 326
F FAK++E DLY ++ L +L+VETW G + DC+ H + + +
Sbjct: 253 SFTNFAKSKEFNADLYDTLVAPTLKTDLVVETWRRG-SEIPLDCKLTYH-ANDALSIHVG 310
Query: 327 GVVEFRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGG 386
F T DH+K H D + +VC GDINR Q RGGG
Sbjct: 311 STTAFSYTKDHSK------------------MAHSADMTKPWVCIGDINRMTSQYVRGGG 352
Query: 387 SVCIDNEALWSLYHSIISAVEPC 409
+ CI + LW Y S+I+ C
Sbjct: 353 TTCISSSFLWKAY-SVIATQNNC 374
>sp|Q9QZK9|DNS2B_RAT Deoxyribonuclease-2-beta OS=Rattus norvegicus GN=Dnase2b PE=1 SV=1
Length = 356
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 168/371 (45%), Gaps = 43/371 (11%)
Query: 42 LIQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATEHKL 101
+I C++E+ VDW FYKLPR S + + G Y+Y+ S T
Sbjct: 25 VISCINEDGKAVDWFAFYKLPRRTSRGGTGM--GLDYLYLDS-------------TMRTW 69
Query: 102 NKRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTP--IRTTVKFGHSK 159
+K H +N G+ L L+ A A D ++YND P + + +GH+K
Sbjct: 70 SK--SHHLINSSRSSLGRTLEQ-LYEAHNAKN---DTAYLIYNDAVPASVNYSGNYGHAK 123
Query: 160 GLVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDNLGH 219
GL+V N G W++HS+P F + Y YP +G Y Q+ LC++L SQ +++ L
Sbjct: 124 GLLVWNRVQGFWLIHSIPKFPPVPEKGYEYPSSGRQYAQSGLCITLKYSQYETIDSQLLV 183
Query: 220 NQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFAKTRELG 279
Q YS F+ + + ++ A A+ + + T+ + F FAK+
Sbjct: 184 FQPNIYSCFIPNIFRWELIHMPQMCAKSSASKIPS-RRLTVLQSAQGLNFLHFAKSTFYT 242
Query: 280 DDLYKR-ISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVVEFRSTHDHA 338
DD++ I+ L V+LLVE+W L ++C P H V N++ + +F S HDH+
Sbjct: 243 DDIFAAWIAQKLKVHLLVESWQRKNHELPSNCSLPYH-VYNIKAIRGPLQSDFPSHHDHS 301
Query: 339 KWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNEALWSL 398
KW +S D + C GD+NR+ Q R GG +C N ++
Sbjct: 302 KWCVS-----------------TKDSQARWTCIGDLNRSPHQALRSGGFICSKNRYIYQS 344
Query: 399 YHSIISAVEPC 409
+ ++S C
Sbjct: 345 FDRLVSHYASC 355
>sp|P56541|DNS2A_BOVIN Deoxyribonuclease-2-alpha OS=Bos taurus GN=DNASE2 PE=2 SV=2
Length = 365
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 162/382 (42%), Gaps = 54/382 (14%)
Query: 39 PNTLIQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATE 98
P + C ++ PVDW + YKLP H+ NG Y Y E
Sbjct: 16 PVGTLTCYGDSGQPVDWFVVYKLP-AHTGSGDATQNGLRYKYFD---------------E 59
Query: 99 HKLNKRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTPIRTTVKF--- 155
H + + +N G+ L P N + F +LYNDQ P + K
Sbjct: 60 HSEDWSDGVGFINSTTGAVGRSLLPLYRNNNSQLAF------VLYNDQPPKSSESKDSSS 113
Query: 156 -GHSKGLVVGNSRGGIWIVHSVPHFVDDSQTS-YTYPHTGLMYGQNFLCLSLNASQLDSV 213
GH+KG+++ + GG W++HSVP+F + ++ Y++P YGQ +C+S +Q +
Sbjct: 114 RGHTKGVLLLDQEGGFWLIHSVPNFPPRASSAVYSWPPGAQKYGQTLICVSFPLTQFLDI 173
Query: 214 GDNLGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFA 273
L + Y L FP L V+ G + G + S T F +FA
Sbjct: 174 SKQLTYTYPLVYDHRLEGDFAQKFPYLEEVVKGHHVRQGP-WNSSVTLTSKKGATFQSFA 232
Query: 274 KTRELGDDLYK-RISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVV--E 330
K GDDLY +S+ L L V+ W G L ++C S A V +V A G
Sbjct: 233 KFGNFGDDLYSGWLSEALGSTLQVQFWQRSSGILPSNC-SGAQHVFDVTQTAFPGPAGPA 291
Query: 331 FRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCI 390
F +T DH+KW ++ + C GD+NR + + RGGG++C
Sbjct: 292 FNATEDHSKWCVTPKGP--------------------WACVGDMNRNQREEHRGGGTLCA 331
Query: 391 DNEALWSLYHSIISAVEPCPRE 412
+ LW + ++ A EPC ++
Sbjct: 332 --QMLWKAFKPLVKAWEPCEKK 351
>sp|P34508|CRN6_CAEEL Cell death-related nuclease 6 OS=Caenorhabditis elegans GN=crn-6
PE=2 SV=3
Length = 378
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 53/384 (13%)
Query: 40 NTLIQCVDENNNPVDWIIFYKLPRIHSSPNSL-VVNGEAYMYVSSEDVKRFEEGKKKATE 98
N QC D N + VDW +FYKLP + + P+++ + NG ++Y
Sbjct: 16 NAAYQCKDNNGSNVDWFVFYKLPHLWNHPDNVPISNGTGFLYFD---------------- 59
Query: 99 HKLNKRNKHEKLNGVDKKKGKI---LSPYLFNASYAPEFSADGVKILYNDQTPIRT--TV 153
+N +N G+D + + L Y +N++ FS +YND+ P T +
Sbjct: 60 --VNNKNWKLMPQGMDVENNAVYYTLQQY-YNSNMNTTFS-----YMYNDEWPDSTIWSN 111
Query: 154 KFGHSKGLVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSV 213
GH+KG+ V + G W++HS+P F S+ + +P YGQ +C+S N L ++
Sbjct: 112 SSGHAKGVTVFDQYTGFWMIHSIPKF--PSKDMFRFPSNAHYYGQMGICISYNTVSLATI 169
Query: 214 GDNLGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFA 273
L + + Y L FP L+++ EY S + + F FA
Sbjct: 170 AQQLFYYNTFTYQFNLPQSFANQFPVLSQLKNKEYNKSPP-LTSTKVLKSLGGQHFRHFA 228
Query: 274 KTRELGDDLYKR-ISDNLNVNLLVETWPNGPG---RLRTDCESPAH--EVMNVEGVALSG 327
KT E G DLY + L ++ VETW + G L + C+ P H M+ + + L
Sbjct: 229 KTGEWGKDLYSDFVGPTLKSSIKVETWNHQSGDEYNLPSVCD-PNHVQSTMSAKYIRLPY 287
Query: 328 VVEFRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGS 387
+++ S DH+K+ +++ S+ + +VC GDINR Q+ RGGG+
Sbjct: 288 AIDYSSYEDHSKFVVAY-------------SESSSKPPIPYVCIGDINRQSHQIHRGGGT 334
Query: 388 VCIDNEALWSLYHSIISAVEPCPR 411
+CI ++ + + +IIS PC +
Sbjct: 335 MCIYDQETYFQFANIISETVPCTK 358
>sp|Q8WZ79|DNS2B_HUMAN Deoxyribonuclease-2-beta OS=Homo sapiens GN=DNASE2B PE=2 SV=1
Length = 361
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 161/370 (43%), Gaps = 42/370 (11%)
Query: 43 IQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATEHKLN 102
I C +E VDW FYKLP+ + + G Y+Y+ S +
Sbjct: 30 ISCRNEEGKAVDWFTFYKLPKRQNKESG--ETGLEYLYLDSTTR---------------S 72
Query: 103 KRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTP--IRTTVKFGHSKG 160
R + +N G+ L L+ A YA + S + ++YND P + + K+GH+KG
Sbjct: 73 WRKSEQLMNDTKSVLGRTLQQ-LYEA-YASK-SNNTAYLIYNDGVPKPVNYSRKYGHTKG 129
Query: 161 LVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDNLGHN 220
L++ N G W++HS+P F + Y YP TG GQ+ +C++ +Q +++ L
Sbjct: 130 LLLWNRVQGFWLIHSIPQFPPIPEEGYDYPPTGRRNGQSGICITFKYNQYEAIDSQLLVC 189
Query: 221 QIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFAKTRELGD 280
YS + A + ++ ++ +T+ + Q H FAK+ D
Sbjct: 190 NPNVYSCSIPATFHQELIHMPQLCTRASSSEIPGRLLTTLQSAQGQKFLH-FAKSDSFLD 248
Query: 281 DLYKR-ISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVVEFRSTHDHAK 339
D++ ++ L +LL ETW L ++C P H V N++ + LS F S DHAK
Sbjct: 249 DIFAAWMAQRLKTHLLTETWQRKRQELPSNCSLPYH-VYNIKAIKLSRHSYFSSYQDHAK 307
Query: 340 WTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNEALWSLY 399
W IS + + C GD+NR+ Q R GG +C N ++ +
Sbjct: 308 WCIS-----------------QKGTKNRWTCIGDLNRSPHQAFRSGGFICTQNWQIYQAF 350
Query: 400 HSIISAVEPC 409
++ E C
Sbjct: 351 QGLVLYYESC 360
>sp|Q9QY48|DNS2B_MOUSE Deoxyribonuclease-2-beta OS=Mus musculus GN=Dnase2b PE=2 SV=1
Length = 354
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 158/376 (42%), Gaps = 71/376 (18%)
Query: 43 IQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATEHKLN 102
I C +E VDW IFYKLP+ S + G Y+Y+ S T N
Sbjct: 26 ISCRNEYGEAVDWFIFYKLPKRTSKASEEA--GLQYLYLDS-------------TRQTWN 70
Query: 103 KRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTP--IRTTVKFGHSKG 160
K +N G+ L +L++ + + D ++YND P + + ++GH+KG
Sbjct: 71 K--SLYLINSTRSALGRTLQ-HLYDTHNS---TNDTAYLIYNDGVPGSVNYSRQYGHAKG 124
Query: 161 LVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDNLGHN 220
L+V N G W++HSVP F Y YP +G YGQ +C++ SQ + + L
Sbjct: 125 LLVWNRTQGFWLIHSVPKF--PPVHGYEYPTSGRRYGQTGICITFGYSQFEEIDFQLLVL 182
Query: 221 QIYKYSTFLSA-------------GNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQI 267
Q YS F+ + N R +A ++ G NF
Sbjct: 183 QPNIYSCFIPSTFHWKLIYMPRMCANSSSLKIPVRYLAELHSAQGLNFVH---------- 232
Query: 268 PFHTFAKTRELGDDLYK-RISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALS 326
FAK+ DD++ I+ L +LL +TW L ++C P H V N++ + ++
Sbjct: 233 ----FAKSSFYTDDIFTGWIAQKLKTHLLAQTWQKKKQELPSNCSLPYH-VYNIKSIGVT 287
Query: 327 GVVEFRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGG 386
F S DH+KW +S A + C GD+NR+ Q RGGG
Sbjct: 288 SKSYFSSRQDHSKWCVSIKGS-----------------ANRWTCIGDLNRSLHQALRGGG 330
Query: 387 SVCIDNEALWSLYHSI 402
+C N ++ +H +
Sbjct: 331 FICTKNHYIYQAFHKL 346
>sp|Q63IT3|DNS2_BURPS Putative deoxyribonuclease-2 OS=Burkholderia pseudomallei (strain
K96243) GN=BPSS1983 PE=3 SV=1
Length = 350
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 145/363 (39%), Gaps = 56/363 (15%)
Query: 43 IQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATEHKLN 102
I DE N VD YK+P++ +S G Y+Y E G + + +++N
Sbjct: 3 ISPRDEQNRSVDLWFAYKVPKLTKDTDSDSATGYEYVYYDRE------IGSVQKSPNRMN 56
Query: 103 KRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTPIRT----TVKFGHS 158
KG + Y ++ + S G ILYND+ P GH+
Sbjct: 57 N------------PKGALF--YTLDSIFGDPGSTTGW-ILYNDEMPADADRSNNATLGHT 101
Query: 159 KGLVVGN--SRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDN 216
KG++ + S +W++HS P + S P +YGQ FLC+SL+ +
Sbjct: 102 KGVIAFDIASNSALWLLHSWPKYTSPSAPGVPTP----LYGQTFLCVSLDLETAGKIAAQ 157
Query: 217 LGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFAKTR 276
+ +Q + +AG P + GD+ S F PF AK R
Sbjct: 158 MALHQQPQVYLPRTAGLDHASPLYTLTQPLNASAPGDS--DSLDFKTRGGAPFKVIAKNR 215
Query: 277 ELGDDLYKR-ISDNLNVNLLVETWPNG--PGRLRTDCESPAHEVMNVEGVALSGVVEFRS 333
+ G D + + L ++ VETW G P L +D +++ ++ L +
Sbjct: 216 KWGKDFWNDLVGPTLKADMDVETWIRGKIPPILDSDGVHKTYDIKFIDLRKLGAPWAWPE 275
Query: 334 THDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNE 393
T DHAKW I+ ++ +VC GDINR Q KRGGG++ +
Sbjct: 276 TQDHAKWGITTTDD--------------------WVCVGDINRMVTQEKRGGGTIAFQDP 315
Query: 394 ALW 396
LW
Sbjct: 316 QLW 318
>sp|Q3JJK4|DNS2_BURP1 Putative deoxyribonuclease-2 OS=Burkholderia pseudomallei (strain
1710b) GN=BURPS1710b_A1091 PE=3 SV=1
Length = 350
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 145/363 (39%), Gaps = 56/363 (15%)
Query: 43 IQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATEHKLN 102
I DE N VD YK+P++ +S G Y+Y E G + + +++N
Sbjct: 3 ISPRDEQNRSVDLWFAYKVPKLTKDTDSDSATGYEYVYYDRE------IGSVQKSPNRMN 56
Query: 103 KRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTPIRT----TVKFGHS 158
KG + Y ++ + S G ILYND+ P GH+
Sbjct: 57 N------------PKGALF--YTLDSIFGDPGSTTGW-ILYNDEMPADADRSNNATLGHT 101
Query: 159 KGLVVGN--SRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDN 216
KG++ + S +W++HS P + S P +YGQ FLC+SL+ +
Sbjct: 102 KGVIAFDIASNSALWLLHSWPKYTSPSAPGVPTP----LYGQTFLCVSLDLETAGKIAAQ 157
Query: 217 LGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFAKTR 276
+ +Q + +AG P + GD+ S F PF AK R
Sbjct: 158 MALHQQPQVYLPRTAGLDHASPLYTLTQPLNASAPGDS--DSLDFKTRGGAPFKVIAKNR 215
Query: 277 ELGDDLYKR-ISDNLNVNLLVETWPNG--PGRLRTDCESPAHEVMNVEGVALSGVVEFRS 333
+ G D + + L ++ VETW G P L +D +++ ++ L +
Sbjct: 216 KWGKDFWNDLVGPTLKADMDVETWIRGKIPPILDSDGVHKTYDIKFIDLRKLGAPWAWPE 275
Query: 334 THDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNE 393
T DHAKW I+ ++ +VC GDINR Q KRGGG++ +
Sbjct: 276 TQDHAKWGITTTDD--------------------WVCVGDINRMVTQEKRGGGTIAFQDP 315
Query: 394 ALW 396
LW
Sbjct: 316 QLW 318
>sp|Q2T8B0|DNS2_BURTA Putative deoxyribonuclease-2 OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301)
GN=BTH_II0389 PE=3 SV=1
Length = 350
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 147/363 (40%), Gaps = 56/363 (15%)
Query: 43 IQCVDENNNPVDWIIFYKLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATEHKLN 102
I DE N VD YK+P++ +S +G Y+Y + ++
Sbjct: 3 ISPRDEQNRSVDLWFAYKVPKLTKDADSDSASGYEYVYY----------------DRQVG 46
Query: 103 KRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQTPIRTT----VKFGHS 158
K L ++ KG + Y ++ + G ILYND+ P GH+
Sbjct: 47 AVQKSPNL--MNDPKGALF--YTLDSVFGDPGDTTGW-ILYNDEMPADANRSNNATLGHT 101
Query: 159 KGLVVGN--SRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDN 216
KG++ + S +W++HS P + S P +YGQ FLCLSL+ + +
Sbjct: 102 KGVIAFDIASSSALWLLHSWPKYASPSVPGVPTP----LYGQTFLCLSLDLATAGKLAAQ 157
Query: 217 LGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFAKTR 276
+ +Q + + G P A + GD+ S F +PF AK R
Sbjct: 158 MALHQQPQVYLPRTGGLDHTSPLYALTQPLNASAPGDS--DSLDFKTRGGVPFKVIAKNR 215
Query: 277 ELGDDLYKR-ISDNLNVNLLVETWPNG--PGRLRTDCESPAHEVMNVEGVALSGVVEFRS 333
+ G D + + L ++ VETW G P L +D +++ ++ L +
Sbjct: 216 KWGKDFWNDLVGPTLKADMYVETWIRGKIPPVLDSDGVHKTYDIKFIDLRKLGAPWAWPE 275
Query: 334 THDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNE 393
T DHAKW I+ TD ++VC GDINR Q KRGGG++ +
Sbjct: 276 TQDHAKWGIT-----------------TTD---NWVCVGDINRMVTQEKRGGGTIAFQDP 315
Query: 394 ALW 396
LW
Sbjct: 316 KLW 318
>sp|A1SMP3|MDH_NOCSJ Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614)
GN=mdh PE=3 SV=1
Length = 328
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 277 ELGDDLYKRISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGV 328
++GDD ++I D +N+ LLV P GPG R D S + +G AL+ V
Sbjct: 69 QIGDD-AEQIFDGVNLALLVGARPRGPGMERGDLLSANGAIFTAQGKALNKV 119
>sp|Q47IE0|SYD_DECAR Aspartate--tRNA ligase OS=Dechloromonas aromatica (strain RCB)
GN=aspS PE=3 SV=1
Length = 599
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 134 FSADGVKILYNDQTPIRTTVKFGHSKGLVVGNSRGGIWIVHSVPHF-VDDSQTSYTYPH 191
F AD KI+ + +R +K GH KG V G +W++ P F DD +T H
Sbjct: 396 FGADKAKIVNDALGALR--IKIGHEKGFVTGAKWAPLWVI-DFPMFEYDDESKRWTACH 451
>sp|Q9LT72|PUS4_ARATH RNA pseudourine synthase 4, mitochondrial OS=Arabidopsis thaliana
GN=At3g19440 PE=2 SV=1
Length = 477
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 21 IPLTKPLTTPGTPYVNKEPNTLIQCVDENNNPVDWIIFYKLPRI--HSSPNSLVVNGEAY 78
+PL+ TP TP KE QC DE V ++ YK P I + P+ L V G +
Sbjct: 152 LPLSVDNDTPQTPPAKKES---FQCSDEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSG 208
Query: 79 MYVSSEDVK----RFEEGKKKATEHKLNK 103
+ S +++ +F++ + H+L++
Sbjct: 209 IKTSIDELAASCLKFDKSESPRLVHRLDR 237
>sp|Q9CGX3|YJJG_LACLA UPF0374 protein YjjG OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=yjjG PE=3 SV=1
Length = 176
Score = 32.3 bits (72), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Query: 66 SSPNSLVVNGEAYMYVSSE-DVKRFEEGKKK---ATEHKLNKRNKH--EKLNGVDKKKGK 119
+SP V++ EA Y+ + DVK F++G+KK E++ ++R H ++++ + K+ K
Sbjct: 89 ASP--FVLDNEALKYIDYDLDVKVFKDGEKKLLDVEEYERHRRKMHYPKEIDHILKENVK 146
Query: 120 ILSPYLFNASYAPEFSADGVKILYN 144
IL ++ N P FS + V+I YN
Sbjct: 147 ILVDWINNEK-GP-FSKEYVEIWYN 169
>sp|Q02ZN0|Y1055_LACLS UPF0374 protein LACR_1055 OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=LACR_1055 PE=3 SV=1
Length = 176
Score = 32.3 bits (72), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Query: 66 SSPNSLVVNGEAYMYVSSE-DVKRFEEGKKK---ATEHKLNKRNKH--EKLNGVDKKKGK 119
+SP V++ EA Y+ + DVK F++G+KK E++ ++R H ++++ + K+ K
Sbjct: 89 ASP--FVLDNEALKYIDYDLDVKVFKDGEKKLLDVEEYERHRRKMHYPKEIDHILKENVK 146
Query: 120 ILSPYLFNASYAPEFSADGVKILYN 144
IL ++ N P FS + V+I YN
Sbjct: 147 ILVDWINNEK-GP-FSKEYVEIWYN 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,119,767
Number of Sequences: 539616
Number of extensions: 7227428
Number of successful extensions: 16574
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 16482
Number of HSP's gapped (non-prelim): 25
length of query: 412
length of database: 191,569,459
effective HSP length: 120
effective length of query: 292
effective length of database: 126,815,539
effective search space: 37030137388
effective search space used: 37030137388
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)