RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy651
         (412 letters)



>d1ldda_ a.4.5.34 (A:) Anaphase promoting complex (APC) {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 74

 Score = 27.8 bits (62), Expect = 0.46
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 60  KLPRIHSSPNSLVVNGEAYMYVSSEDVKRFEEGKKKATEHKL 101
           KL +IHS     V     Y  ++ + ++ +        E +L
Sbjct: 24  KLHKIHSFLKITVPKDWGYNRITLQQLEGYLNTLAD--EGRL 63


>d1iqca1 a.3.1.5 (A:1-150) Di-heme cytochrome c peroxidase
           {Nitrosomonas europaea [TaxId: 915]}
          Length = 150

 Score = 27.8 bits (61), Expect = 1.6
 Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 2/67 (2%)

Query: 99  HKLNKRNKHEKLNGVDKKKGKILSPYLFNASYAPEFSADGVKILYNDQT--PIRTTVKFG 156
             +   +      G   ++G I +P + N+S       DG      +Q   PI    +  
Sbjct: 45  LSMGGTDNITTSIGHKWQQGPINAPTVLNSSMNLAQFWDGRAKDLKEQAAGPIANPKEMA 104

Query: 157 HSKGLVV 163
            +  +  
Sbjct: 105 STHEIAE 111


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.134    0.405 

Gapped
Lambda     K      H
   0.267   0.0608    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,478,140
Number of extensions: 67599
Number of successful extensions: 144
Number of sequences better than 10.0: 1
Number of HSP's gapped: 144
Number of HSP's successfully gapped: 8
Length of query: 412
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 324
Effective length of database: 1,199,356
Effective search space: 388591344
Effective search space used: 388591344
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (24.8 bits)