BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6519
(208 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91085333|ref|XP_970254.1| PREDICTED: similar to AGAP001629-PA [Tribolium castaneum]
gi|270008427|gb|EFA04875.1| hypothetical protein TcasGA2_TC014933 [Tribolium castaneum]
Length = 264
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 24 LVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYC 83
+ R AGHSKWQNIRHIK AKD ++ LFT LS+++K+AV+EGG D N +L + I+
Sbjct: 23 IYRLAGHSKWQNIRHIKGAKDAARSLLFTKLSRQMKVAVQEGGSADITKNSKLENVIEQA 82
Query: 84 KKSSMPMTTIENAIKSCN 101
K+++MP TI++ ++SC
Sbjct: 83 KRANMPTATIQSVLRSCE 100
>gi|332375753|gb|AEE63017.1| unknown [Dendroctonus ponderosae]
Length = 259
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
R+AGHSKW NIRH+K KD ++ LF LS+++K+AV EGG P N +L ID CK+
Sbjct: 13 RFAGHSKWANIRHVKGTKDAQRGLLFGKLSRQIKVAVTEGGSIGPTKNPKLKQIIDQCKR 72
Query: 86 SSMPMTTIENAIKSCNVPENI 106
+MP T+++ +KSC+ + +
Sbjct: 73 FNMPSATMQSVLKSCSADKTV 93
>gi|241896991|ref|NP_001155952.1| translational activator of cytochrome c oxidase 1 [Acyrthosiphon
pisum]
gi|239793049|dbj|BAH72788.1| ACYPI008169 [Acyrthosiphon pisum]
Length = 276
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%)
Query: 23 LLVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDY 82
L R AGH+KW NI+HIK A DQ+K+ +F S+++KLA++E ++P TN +LAS I+
Sbjct: 31 LFKRNAGHNKWSNIKHIKGANDQQKSLMFARFSRQMKLAIREQNDSNPETNSKLASIIEM 90
Query: 83 CKKSSMPMTTIENAIKS 99
KK+SMP TI N IK+
Sbjct: 91 AKKNSMPKDTILNTIKT 107
>gi|345486334|ref|XP_003425452.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Nasonia vitripennis]
Length = 262
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
R+AGH+KW NIRHIK A+D E+A+ L KK+K+A+ EG P+ N +LA ID KK
Sbjct: 22 RFAGHNKWSNIRHIKMARDSERASALQTLIKKMKIAIAEGKSAKPDENVKLARLIDQAKK 81
Query: 86 SSMPMTTIENAIK 98
+S+PM TI+N ++
Sbjct: 82 NSLPMATIKNLLE 94
>gi|195385084|ref|XP_002051238.1| GJ14855 [Drosophila virilis]
gi|194147695|gb|EDW63393.1| GJ14855 [Drosophila virilis]
Length = 244
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 51/73 (69%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+HIKA KD +A LFT ++++L+LAV+EG DP N L S ID K +
Sbjct: 2 AGHSKWANIKHIKAQKDGLRAALFTKIARQLRLAVQEGKSADPAVNSLLRSEIDNALKKN 61
Query: 88 MPMTTIENAIKSC 100
MP+ TI+N IK C
Sbjct: 62 MPIGTIQNTIKKC 74
>gi|195118664|ref|XP_002003856.1| GI18134 [Drosophila mojavensis]
gi|193914431|gb|EDW13298.1| GI18134 [Drosophila mojavensis]
Length = 244
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 50/74 (67%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+HIKA KD +A LF ++++L+LAV+EG DP N L S ID K +
Sbjct: 2 AGHSKWANIKHIKAQKDGLRAALFEKIARQLRLAVQEGKSADPAVNSLLRSEIDNALKRN 61
Query: 88 MPMTTIENAIKSCN 101
MPM TI+N IK C
Sbjct: 62 MPMGTIQNTIKKCQ 75
>gi|195050356|ref|XP_001992876.1| GH13516 [Drosophila grimshawi]
gi|193899935|gb|EDV98801.1| GH13516 [Drosophila grimshawi]
Length = 245
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+HIKA KD +A LFT ++++++LAV+EG DP N L S ID K +
Sbjct: 2 AGHSKWANIKHIKAQKDGLRAALFTKIARQIRLAVQEGKSGDPAVNSLLRSEIDNALKKN 61
Query: 88 MPMTTIENAIKSC 100
MP+ TI+N IK C
Sbjct: 62 MPIGTIQNTIKKC 74
>gi|307193215|gb|EFN76106.1| Coiled-coil domain-containing protein 44 [Harpegnathos saltator]
Length = 183
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
R+ GHSKW NIRHIKA KD E+ LF +L ++K+A++E G T P+ N +LA I+ KK
Sbjct: 7 RFKGHSKWDNIRHIKAEKDYERMLLFKSLKLQMKVAIQEHGSTKPDNNLKLAQVIENAKK 66
Query: 86 SSMPMTTIENAIKSCNVPEN 105
++MP+++I++ ++ +N
Sbjct: 67 ANMPISSIKSFLEKMEATKN 86
>gi|188586415|ref|YP_001917960.1| hypothetical protein Nther_1800 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|226695972|sp|B2A5L8.1|Y1800_NATTJ RecName: Full=Probable transcriptional regulatory protein
Nther_1800
gi|179351102|gb|ACB85372.1| protein of unknown function DUF28 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 250
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D+++ LF+ LSK++ +A KEGGG DP N+RL + K+++
Sbjct: 2 AGHSKWANIKHKKARVDEKRGKLFSKLSKEIIVAAKEGGG-DPEKNFRLRMAVQKAKENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAM-------- 139
MP IE AIK + Y E+S + P G A + AM
Sbjct: 61 MPNDNIERAIKKGTGELKGFNYEEISYEGYGPG----------GVAIFLDAMTDNKNRTA 110
Query: 140 SRVRFPPSAN-----------FISNRLGLFLECSEPITRMKQASVLLATALA 180
S VR + N ++ +R GL E + + ++L TA A
Sbjct: 111 SEVRHIFTKNDGNLGEDGCVAWMFDRKGLITIDKEQAENIDEEELMLLTAEA 162
>gi|242023839|ref|XP_002432338.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517761|gb|EEB19600.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 273
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
R+AGHSKW NI+H+K AKDQ +A+LF LS K+ LA KE G +P TN +L + + K+
Sbjct: 33 RWAGHSKWSNIKHVKMAKDQARASLFNKLSYKISLAAKE--GENPETNSKLKAALAEAKQ 90
Query: 86 SSMPMTTIENAIK 98
++MP TI+ AIK
Sbjct: 91 ANMPNATIQGAIK 103
>gi|288574888|ref|ZP_06393245.1| protein of unknown function DUF28 [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570629|gb|EFC92186.1| protein of unknown function DUF28 [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 248
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 68/131 (51%), Gaps = 13/131 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KAA+D ++ LF L K + +A KEGGG DP TN RL + +D K +S
Sbjct: 2 SGHSKWANIKHRKAAQDAKRGNLFQKLIKAIIIAAKEGGG-DPATNIRLKAALDRAKAAS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
+P IE AIK Y EL+ + P EG A +V ++ + R
Sbjct: 61 VPSNNIERAIKRGTGEIEGATYEELAYEGYGP----------EGVAVIVECLTDNKNRTT 110
Query: 146 PSANFISNRLG 156
P I +R G
Sbjct: 111 PEIRMIFDRNG 121
>gi|289743065|gb|ADD20280.1| uncharacterized conserved protein [Glossina morsitans morsitans]
Length = 281
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+HIKA KD EKA +F ++++L+LA++EGG TDP N +L + ID + +
Sbjct: 35 AGHSKWANIKHIKAEKDGEKAMVFLRVARQLRLAIQEGGSTDPVHNSKLRNVIDDALRKN 94
Query: 88 MPM 90
MPM
Sbjct: 95 MPM 97
>gi|383857839|ref|XP_003704411.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Megachile rotundata]
Length = 263
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
RYAGHSKW NI+HIK D+ + LF L K+ +AV+E G DP N +LA+ ID KK
Sbjct: 23 RYAGHSKWHNIKHIKEENDRTRGQLFKTLISKMTVAVREEGSADPLLNSKLANLIDQAKK 82
Query: 86 SSMPMTTIENAIKSCNVPE 104
+MP++TI + P+
Sbjct: 83 VNMPLSTINTFLNKMKTPK 101
>gi|157819487|ref|NP_001101772.1| translational activator of cytochrome c oxidase 1 [Rattus
norvegicus]
gi|263511729|sp|B2RYT9.1|TACO1_RAT RecName: Full=Translational activator of cytochrome c oxidase 1;
AltName: Full=Coiled-coil domain-containing protein 44;
AltName: Full=Translational activator of
mitochondrially-encoded cytochrome c oxidase I
gi|149054538|gb|EDM06355.1| rCG32552 [Rattus norvegicus]
gi|187469112|gb|AAI66900.1| Coiled-coil domain containing 44 [Rattus norvegicus]
Length = 295
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
V +AGH+KW +RHIK KD E++ +F+ L+ ++LAVKE GG +P N LA+ ++ C+
Sbjct: 52 VAFAGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVKE-GGPNPENNSSLANILEVCR 110
Query: 85 KSSMPMTTIENAIKS 99
+MP +TIE+A+KS
Sbjct: 111 SKNMPKSTIESALKS 125
>gi|319790085|ref|YP_004151718.1| hypothetical protein Theam_1111 [Thermovibrio ammonificans HB-1]
gi|317114587|gb|ADU97077.1| protein of unknown function DUF28 [Thermovibrio ammonificans
HB-1]
Length = 247
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ ++T L++++ +A +EGGG DP TN RL + I+ +K +
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIYTKLAREITVAAREGGG-DPETNPRLRAAIERARKFN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKENIERAIK 71
>gi|254577805|ref|XP_002494889.1| ZYRO0A12056p [Zygosaccharomyces rouxii]
gi|238937778|emb|CAR25956.1| ZYRO0A12056p [Zygosaccharomyces rouxii]
Length = 280
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
++ +GH+KW I+H KA D +K LF+ ++++ +AVK+GG TDPN N RLA+ ++ +
Sbjct: 27 IQLSGHNKWSTIKHDKAKNDSQKNKLFSQFAQRISIAVKQGGSTDPNINMRLATALEQAQ 86
Query: 85 KSSMPMTTIENAI-KSCNVP 103
K+++ IENAI K VP
Sbjct: 87 KNNVTKKVIENAIRKGSGVP 106
>gi|325295278|ref|YP_004281792.1| yeeN [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065726|gb|ADY73733.1| UPF0082 protein yeeN [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 247
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ ++T L++++ +A +EGGG DP TN RL + I+ +K +
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIYTKLAREITVAAREGGG-DPETNPRLRAAIERARKFN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKENIERAIK 71
>gi|380021363|ref|XP_003694537.1| PREDICTED: UPF0082 protein LCABL_11860-like [Apis florea]
Length = 197
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
RYAGHSKW+NI+ K A+D EK+ +F +L+ K+K VKE G +DP N +L ID KK
Sbjct: 22 RYAGHSKWKNIKATKEAQDSEKSAIFRSLASKMKAVVKETGNSDPTNNVKLTQLIDQAKK 81
Query: 86 SSMPMTTIE 94
++MP T++
Sbjct: 82 ANMPGNTLK 90
>gi|296132695|ref|YP_003639942.1| hypothetical protein TherJR_1177 [Thermincola potens JR]
gi|296031273|gb|ADG82041.1| protein of unknown function DUF28 [Thermincola potens JR]
Length = 250
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D +K +FT L K+L +AVK+GGG DP N RL + I C++++
Sbjct: 2 AGHSKWANIKHRKAKQDAQKGKIFTKLGKELIVAVKQGGG-DPEANPRLKAVIQKCREAN 60
Query: 88 MPMTTIENAI 97
MPM I I
Sbjct: 61 MPMDNINRTI 70
>gi|410895887|ref|XP_003961431.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Takifugu rubripes]
Length = 286
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++HIK KD +A +F L+ +KLAVKEGG +P+ N LA ++ C+ +
Sbjct: 49 AGHNKWSKVKHIKGPKDDARARVFMKLTMMIKLAVKEGGA-NPDMNLNLAQILEQCRSKN 107
Query: 88 MPMTTIENAIKSCNVP 103
MP +IE AIKS + P
Sbjct: 108 MPKASIETAIKSASKP 123
>gi|47219729|emb|CAG12651.1| unnamed protein product [Tetraodon nigroviridis]
Length = 288
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 27 YAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKS 86
+AGH+KW ++HIK KD+ +A +F L +KLAVKE GG +P+ N LA ++ C+
Sbjct: 52 WAGHNKWSKVKHIKGPKDEARARMFMKLGMMIKLAVKE-GGPNPDMNINLAQILEQCRSK 110
Query: 87 SMPMTTIENAIKSCNVP 103
+MP ++E AIKS P
Sbjct: 111 NMPKASVETAIKSAVKP 127
>gi|350422615|ref|XP_003493229.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Bombus impatiens]
Length = 264
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
RYAGHSKWQNI+ K D +A +F LS K+K E G +DPNTN +LA+ ++ +K
Sbjct: 22 RYAGHSKWQNIKATKQEHDTARAQIFNTLSHKMKAVAIESGNSDPNTNPKLANLVEQARK 81
Query: 86 SSMPMTTIE 94
++MPM+T++
Sbjct: 82 ANMPMSTLK 90
>gi|367013176|ref|XP_003681088.1| hypothetical protein TDEL_0D02930 [Torulaspora delbrueckii]
gi|359748748|emb|CCE91877.1| hypothetical protein TDEL_0D02930 [Torulaspora delbrueckii]
Length = 268
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
V ++GH+KW I+H KA D E+ LF+ ++++ LAVK GGG DP N RLA+ I+
Sbjct: 21 VVWSGHNKWSTIKHDKAKNDAERNKLFSKFAQRISLAVKAGGGIDPQLNIRLATAIEQAS 80
Query: 85 KSSMPMTTIENAIK 98
K+++ IENAIK
Sbjct: 81 KNNVTKKVIENAIK 94
>gi|157363874|ref|YP_001470641.1| hypothetical protein Tlet_1011 [Thermotoga lettingae TMO]
gi|166919120|sp|A8F5Z3.1|Y1011_THELT RecName: Full=Probable transcriptional regulatory protein
Tlet_1011
gi|157314478|gb|ABV33577.1| protein of unknown function DUF28 [Thermotoga lettingae TMO]
Length = 253
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +K+ LFT L ++L +A +EGGG DP TN RL + I+ K+++
Sbjct: 2 SGHNKWANIKHRKMAQDAKKSQLFTKLIRELIVAAREGGG-DPETNSRLRTAIEKAKEAN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPRENIEKAIK 71
>gi|195457775|ref|XP_002075709.1| GK23563 [Drosophila willistoni]
gi|194171794|gb|EDW86695.1| GK23563 [Drosophila willistoni]
Length = 246
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H+KA KD+ KA LF + ++++LA++EG DP N L S ID K +
Sbjct: 2 AGHSKWANIKHLKAEKDEYKAVLFAKILRQIRLAIQEGDSVDPALNSMLRSEIDKAVKQN 61
Query: 88 MPMTTIENAIK 98
+P TI+N ++
Sbjct: 62 VPFDTIQNTLR 72
>gi|167758270|ref|ZP_02430397.1| hypothetical protein CLOSCI_00608 [Clostridium scindens ATCC 35704]
gi|336421715|ref|ZP_08601871.1| hypothetical protein HMPREF0993_01248 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167664167|gb|EDS08297.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium
scindens ATCC 35704]
gi|336000186|gb|EGN30339.1| hypothetical protein HMPREF0993_01248 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 243
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT L K+L +AVKEGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKLGKELAVAVKEGGSADPANNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK + N Y ++ + P G+A +V A++ + +
Sbjct: 62 MPNDTIERNIKKADSDANAANYEHITYEGYGPN----------GTAIIVEALTDNKNRTA 111
Query: 148 AN 149
+N
Sbjct: 112 SN 113
>gi|312385119|gb|EFR29693.1| hypothetical protein AND_01147 [Anopheles darlingi]
Length = 150
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKWQNIRH+KA D KA LF L+++++LAV + GG +P N L + ID K +
Sbjct: 33 AGHSKWQNIRHVKALNDGRKAVLFIKLARQIRLAV-QAGGPNPAVNNVLRAAIDEALKKN 91
Query: 88 MPMTTIENAIKSC 100
MP TI+ +K C
Sbjct: 92 MPNATIQGILKKC 104
>gi|163915890|gb|AAI57789.1| LOC100135399 protein [Xenopus (Silurana) tropicalis]
Length = 292
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 6 RPLGVYKVHRLIPDEGYL---LVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAV 62
PLG + + + E Y L+ AGH+KW ++HIK KD+ +A +F LS +K+AV
Sbjct: 26 EPLGRWFLPVVASQETYFHTSLMMSAGHNKWSKVKHIKGPKDEARARVFAKLSMMIKVAV 85
Query: 63 KEGGGTDPNTNYRLASTIDYCKKSSMPMTTIENAIKSCN 101
+E GG +P+ N L+ I+ C++ +MP T+IE AIK +
Sbjct: 86 RE-GGPNPDLNMALSQLIEQCRERNMPKTSIEAAIKGAD 123
>gi|301612204|ref|XP_002935572.1| PREDICTED: translational activator of cytochrome c oxidase 1
[Xenopus (Silurana) tropicalis]
Length = 291
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 6 RPLGVYKVHRLIPDEGYL---LVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAV 62
PLG + + + E Y L+ AGH+KW ++HIK KD+ +A +F LS +K+AV
Sbjct: 25 EPLGRWFLPVVASQETYFHTSLMMSAGHNKWSKVKHIKGPKDEARARVFAKLSMMIKVAV 84
Query: 63 KEGGGTDPNTNYRLASTIDYCKKSSMPMTTIENAIKSCN 101
+E GG +P+ N L+ I+ C++ +MP T+IE AIK +
Sbjct: 85 RE-GGPNPDLNMALSQLIEQCRERNMPKTSIEAAIKGAD 122
>gi|403303744|ref|XP_003942483.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Saimiri boliviensis boliviensis]
Length = 299
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD EK+ +FT L+ ++LAVKE GG +P N LA+ ++ C+
Sbjct: 60 AGHNKWSKVRHIKGPKDAEKSRIFTKLALNIRLAVKE-GGRNPELNSHLANVLEVCRSKH 118
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 119 MPKSTIEAALK 129
>gi|194761716|ref|XP_001963074.1| GF15761 [Drosophila ananassae]
gi|190616771|gb|EDV32295.1| GF15761 [Drosophila ananassae]
Length = 243
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA KD +ATLF LS+++++A++EG DP N L + ID K +
Sbjct: 2 AGHSKWANIKHTKALKDGARATLFAKLSRQIRMAIQEGNSADPAINSLLRTEIDRALKQN 61
Query: 88 MPMTTIENAI 97
MP TI+N +
Sbjct: 62 MPSGTIQNTL 71
>gi|354481668|ref|XP_003503023.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Cricetulus griseus]
gi|344240673|gb|EGV96776.1| Translational activator of cytochrome c oxidase 1 [Cricetulus
griseus]
Length = 294
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L+ ++LAVKE GG +P N LA+ ++ C+ +
Sbjct: 55 AGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVKE-GGPNPENNSHLANVLEMCRSKN 113
Query: 88 MPMTTIENAIKS 99
MP +TIE+A+K+
Sbjct: 114 MPKSTIESALKT 125
>gi|329663596|ref|NP_001192540.1| translational activator of cytochrome c oxidase 1 [Bos taurus]
gi|296476293|tpg|DAA18408.1| TPA: hypothetical protein BOS_19321 [Bos taurus]
Length = 297
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ LS ++LAVKE GG +P N LAS ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDAERSRIFSKLSLSIRLAVKE-GGPNPELNSNLASILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIEAALK 127
>gi|440890866|gb|ELR44949.1| Translational activator of cytochrome c oxidase 1 [Bos grunniens
mutus]
Length = 297
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ LS ++LAVKE GG +P N LAS ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDAERSRIFSKLSLSIRLAVKE-GGPNPELNSNLASILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIEAALK 127
>gi|426238249|ref|XP_004013067.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Ovis aries]
Length = 297
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ LS ++LAVKE GG +P N LAS ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDAERSRIFSKLSLSIRLAVKE-GGPNPELNSNLASILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIEAALK 127
>gi|312880158|ref|ZP_07739958.1| protein of unknown function DUF28 [Aminomonas paucivorans DSM
12260]
gi|310783449|gb|EFQ23847.1| protein of unknown function DUF28 [Aminomonas paucivorans DSM
12260]
Length = 250
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KAA+D +K + L+K + A K GGG DPN N+RL ID ++ +
Sbjct: 2 SGHSKWANIKHRKAAQDAKKGAAYQRLTKAVIAAAKAGGG-DPNANFRLKVAIDRAREGN 60
Query: 88 MPMTTIENAIK 98
+PM IE AIK
Sbjct: 61 VPMDNIERAIK 71
>gi|444727003|gb|ELW67513.1| Translational activator of cytochrome c oxidase 1 [Tupaia
chinensis]
Length = 331
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +FT L ++LAVKE GG +P N LAS ++ C+
Sbjct: 57 AGHNKWSKVRHIKGPKDMERSRIFTKLCLNIRLAVKE-GGPNPELNSNLASILEVCRSKH 115
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 116 MPKSTIEAALK 126
>gi|452994285|emb|CCQ94147.1| conserved hypothetical protein [Clostridium ultunense Esp]
Length = 250
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW+NI+H K +D KA FT +S+++ +A + GGG DPNTN+RL I K+ +
Sbjct: 2 SGHSKWKNIQHRKGRQDAAKANAFTKISREIYMAARNGGG-DPNTNFRLKVAIQKAKEVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP IE IK Y E++ + P
Sbjct: 61 MPNDNIERTIKKATGEIEGVTYEEITYEGYAP 92
>gi|295131887|ref|YP_003582563.1| hypothetical protein ZPR_0003 [Zunongwangia profunda SM-A87]
gi|294979902|gb|ADF50367.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
Length = 252
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D+++A FT K++ +AVKEGGG DP N L + I K +
Sbjct: 2 AGHSKWANIKHRKGAQDKKRAKQFTRAIKEISVAVKEGGGADPEANPSLRNAISNAKGVN 61
Query: 88 MPMTTIENAIKSC 100
MP TI+ AIK
Sbjct: 62 MPKDTIDRAIKKA 74
>gi|347966274|ref|XP_321468.5| AGAP001629-PA [Anopheles gambiae str. PEST]
gi|333470135|gb|EAA00925.5| AGAP001629-PA [Anopheles gambiae str. PEST]
Length = 276
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKWQNIRH+KA D KA LF L+++++LAV + GG +P N L + ID K +
Sbjct: 34 AGHSKWQNIRHVKALNDGRKAVLFIKLARQIRLAV-QAGGPNPAVNNVLRAAIDEALKRN 92
Query: 88 MPMTTIENAIKSC 100
MP TI+ +K C
Sbjct: 93 MPNATIQGILKKC 105
>gi|315918542|ref|ZP_07914782.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|317059562|ref|ZP_07924047.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313685238|gb|EFS22073.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313692417|gb|EFS29252.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 249
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGG-DPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIK 98
MP +E AIK
Sbjct: 61 MPKDILERAIK 71
>gi|12845262|dbj|BAB26682.1| unnamed protein product [Mus musculus]
Length = 220
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L+ ++LAVKE GG +P N LA+ ++ C+ +
Sbjct: 55 AGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVKE-GGPNPENNSSLANILELCRSKN 113
Query: 88 MPMTTIENAIKS 99
MP +TIE+A+K+
Sbjct: 114 MPKSTIESALKT 125
>gi|148702314|gb|EDL34261.1| coiled-coil domain containing 44 [Mus musculus]
Length = 293
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L+ ++LAVKE GG +P N LA+ ++ C+ +
Sbjct: 54 AGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVKE-GGPNPENNSSLANILELCRSKN 112
Query: 88 MPMTTIENAIKS 99
MP +TIE+A+K+
Sbjct: 113 MPKSTIESALKT 124
>gi|39930435|ref|NP_081622.1| translational activator of cytochrome c oxidase 1 [Mus musculus]
gi|33516967|sp|Q8K0Z7.1|TACO1_MOUSE RecName: Full=Translational activator of cytochrome c oxidase 1;
AltName: Full=Coiled-coil domain-containing protein 44;
AltName: Full=Translational activator of
mitochondrially-encoded cytochrome c oxidase 1
gi|22137446|gb|AAH29182.1| Coiled-coil domain containing 44 [Mus musculus]
gi|26338564|dbj|BAC32953.1| unnamed protein product [Mus musculus]
gi|74148551|dbj|BAE24253.1| unnamed protein product [Mus musculus]
Length = 294
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L+ ++LAVKE GG +P N LA+ ++ C+ +
Sbjct: 55 AGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVKE-GGPNPENNSSLANILELCRSKN 113
Query: 88 MPMTTIENAIKS 99
MP +TIE+A+K+
Sbjct: 114 MPKSTIESALKT 125
>gi|119896865|ref|YP_932078.1| hypothetical protein azo0574 [Azoarcus sp. BH72]
gi|166229070|sp|A1K2Y6.1|Y574_AZOSB RecName: Full=Probable transcriptional regulatory protein azo0574
gi|119669278|emb|CAL93191.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 241
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ +A K GGG DPN N RL ID K S
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKVFTKLIKEVTVAAKMGGG-DPNANPRLRLAIDKAKAES 60
Query: 88 MPMTTIENAIK 98
MP IENAIK
Sbjct: 61 MPKDNIENAIK 71
>gi|68480236|ref|XP_715927.1| hypothetical protein CaO19.8072 [Candida albicans SC5314]
gi|68480352|ref|XP_715877.1| hypothetical protein CaO19.442 [Candida albicans SC5314]
gi|46437520|gb|EAK96865.1| hypothetical protein CaO19.442 [Candida albicans SC5314]
gi|46437572|gb|EAK96916.1| hypothetical protein CaO19.8072 [Candida albicans SC5314]
gi|238879019|gb|EEQ42657.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 204
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 39/51 (76%)
Query: 158 FLECSEPITRMKQASVLLATALAHNVFPVPGGPNRRTPLGGSIPRLTNFSG 208
F S+P+TR+ ASV LATALAHNVFPVPGGP PLGGSIP LTN SG
Sbjct: 107 FCTNSDPMTRINVASVSLATALAHNVFPVPGGPYNNIPLGGSIPNLTNLSG 157
>gi|340756727|ref|ZP_08693332.1| hypothetical protein FVAG_00243 [Fusobacterium varium ATCC 27725]
gi|251833991|gb|EES62554.1| hypothetical protein FVAG_00243 [Fusobacterium varium ATCC 27725]
Length = 249
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDRKRAKLFTKFGRELTIAAKEGGG-DPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIK 98
MP +E AIK
Sbjct: 61 MPKDILERAIK 71
>gi|423073402|ref|ZP_17062141.1| DNA-binding regulatory protein, YebC/PmpR family
[Desulfitobacterium hafniense DP7]
gi|361855708|gb|EHL07666.1| DNA-binding regulatory protein, YebC/PmpR family
[Desulfitobacterium hafniense DP7]
Length = 285
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
V +GHSKW NI+H KA D +K +FT L ++L +A + GGG DPN N+RL ID K
Sbjct: 32 VTVSGHSKWANIKHKKAKADAQKGKIFTKLGRELIVAARAGGG-DPNNNFRLKIAIDNAK 90
Query: 85 KSSMPMTTIENAIK 98
++MP I+ AI+
Sbjct: 91 SANMPNDNIQRAIQ 104
>gi|289766382|ref|ZP_06525760.1| conserved hypothetical protein [Fusobacterium sp. D11]
gi|289717937|gb|EFD81949.1| conserved hypothetical protein [Fusobacterium sp. D11]
Length = 249
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGG-DPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|336401543|ref|ZP_08582305.1| hypothetical protein HMPREF0404_01596 [Fusobacterium sp. 21_1A]
gi|423137525|ref|ZP_17125168.1| UPF0082 protein [Fusobacterium nucleatum subsp. animalis F0419]
gi|336160644|gb|EGN63676.1| hypothetical protein HMPREF0404_01596 [Fusobacterium sp. 21_1A]
gi|371959907|gb|EHO77578.1| UPF0082 protein [Fusobacterium nucleatum subsp. animalis F0419]
Length = 249
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGG-DPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|19704982|ref|NP_602477.1| hypothetical protein FN1661 [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296329236|ref|ZP_06871737.1| glucose-1-phosphate adenylyltransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|33517054|sp|Q8RIE0.1|Y1661_FUSNN RecName: Full=Probable transcriptional regulatory protein FN1661
gi|19712888|gb|AAL93776.1| Hypothetical cytosolic protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296153592|gb|EFG94409.1| glucose-1-phosphate adenylyltransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 249
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGG-DPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|237743343|ref|ZP_04573824.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|336419935|ref|ZP_08600185.1| hypothetical protein HMPREF0401_02205 [Fusobacterium sp. 11_3_2]
gi|422936127|ref|ZP_16966705.1| glucose-1-phosphate adenylyltransferase [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|229433122|gb|EEO43334.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|336162443|gb|EGN65409.1| hypothetical protein HMPREF0401_02205 [Fusobacterium sp. 11_3_2]
gi|339890870|gb|EGQ79934.1| glucose-1-phosphate adenylyltransferase [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
Length = 249
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGG-DPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|358467079|ref|ZP_09176848.1| hypothetical protein HMPREF9093_01324 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068390|gb|EHI78399.1| hypothetical protein HMPREF9093_01324 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 249
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGG-DPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|260495037|ref|ZP_05815166.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|260197480|gb|EEW94998.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
Length = 249
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGG-DPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|350276207|ref|NP_001231887.1| translational activator of cytochrome c oxidase 1 [Sus scrofa]
Length = 294
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ LS ++LAVKE GG +P+ N LAS ++ C+
Sbjct: 55 AGHNKWSKVRHIKGPKDTERSRIFSKLSLSIRLAVKE-GGPNPDLNSNLASILEVCRSKH 113
Query: 88 MPMTTIENAIK 98
MP +T+E A+K
Sbjct: 114 MPKSTMEAALK 124
>gi|156740728|ref|YP_001430857.1| hypothetical protein Rcas_0718 [Roseiflexus castenholzii DSM
13941]
gi|189040593|sp|A7NH92.1|Y718_ROSCS RecName: Full=Probable transcriptional regulatory protein
Rcas_0718
gi|156232056|gb|ABU56839.1| protein of unknown function DUF28 [Roseiflexus castenholzii DSM
13941]
Length = 255
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +IR K DQ + LFT L++ + +A +EGG DP N+RL +D + ++
Sbjct: 2 SGHSKWHSIRRTKGVLDQRRGQLFTKLARDITIATREGGSGDPEANFRLRLAVDKARAAN 61
Query: 88 MPMTTIENAIK 98
MPM I+ AI
Sbjct: 62 MPMDNIQRAID 72
>gi|340751611|ref|ZP_08688421.1| hypothetical protein FMAG_01184 [Fusobacterium mortiferum ATCC
9817]
gi|229420575|gb|EEO35622.1| hypothetical protein FMAG_01184 [Fusobacterium mortiferum ATCC
9817]
Length = 249
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI++ K A+D+++A LFT K+L +A KEGGG DPN N RL I+ K +
Sbjct: 2 AGHSKWANIQYRKGAQDKKRAKLFTKFGKELTIAAKEGGG-DPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP +E AIK ++E+ + P
Sbjct: 61 MPKDILERAIKKGTGELEGVDFIEMRYEGYGP 92
>gi|431932849|ref|YP_007245895.1| YebC/PmpR family DNA-binding regulatory protein [Thioflavicoccus
mobilis 8321]
gi|431831152|gb|AGA92265.1| DNA-binding regulatory protein, YebC/PmpR family [Thioflavicoccus
mobilis 8321]
Length = 249
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D+++ ++T L +++ +A +EGGG DPN N RL +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDKQRGKVWTKLIREVTVAAREGGG-DPNANPRLRLAMDKAFGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP T+E A+K Y EL + P G+A +V M+ R +
Sbjct: 61 MPRDTVERAVKRGAGDTEGENYEELRYEGYGPG----------GTAVMVDCMTDNRNRTA 110
Query: 148 A 148
A
Sbjct: 111 A 111
>gi|340723885|ref|XP_003400317.1| PREDICTED: UPF0082 protein PEPE_1240-like [Bombus terrestris]
Length = 264
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
RYAGHSKWQNI+ K D ++ +F LS K+K+ E G DPNTN +LA+ + +K
Sbjct: 22 RYAGHSKWQNIKATKQEHDNARSQIFNTLSHKMKVVALESGNPDPNTNPKLANLVAQARK 81
Query: 86 SSMPMTTIE 94
++MPM+T++
Sbjct: 82 ANMPMSTLK 90
>gi|431794443|ref|YP_007221348.1| YebC/PmpR family DNA-binding regulatory protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784669|gb|AGA69952.1| DNA-binding regulatory protein, YebC/PmpR family
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 252
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KA D +K +FT L ++L +A + GGG DPN N+RL ID K ++
Sbjct: 2 SGHSKWANIKHKKAKADAQKGKVFTKLGRELIVAARSGGG-DPNNNFRLKIAIDNAKVAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP I+ AI+ Y EL + P G A +V M+ R
Sbjct: 61 MPNDNIQRAIQKGAGGAEGESYEELRYEGYGPG----------GVAIMVDIMTDNR 106
>gi|256823082|ref|YP_003147045.1| hypothetical protein Kkor_1865 [Kangiella koreensis DSM 16069]
gi|256796621|gb|ACV27277.1| protein of unknown function DUF28 [Kangiella koreensis DSM 16069]
Length = 247
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT + ++L +A KEGGG DPN N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKIIRELVVAAKEGGG-DPNDNPRLRAAMDKALGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRV 142
M TIE AI+ Y EL+ + P +A LV C+ +R
Sbjct: 61 MKKDTIEKAIERGTGNAEGDNYEELTYEGYGPG-GVAILVE-----CMTDNKNRT 109
>gi|225567903|ref|ZP_03776928.1| hypothetical protein CLOHYLEM_03976, partial [Clostridium hylemonae
DSM 15053]
gi|225163304|gb|EEG75923.1| hypothetical protein CLOHYLEM_03976 [Clostridium hylemonae DSM
15053]
Length = 216
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + K+L +AVKEGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKIGKELAVAVKEGGSADPANNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP TI+ IK + N Y ++ + P G+A +V A++ R
Sbjct: 62 MPNDTIDRNIKKADGDANAANYEYITYEGYGPN----------GTAIIVEALTDNR 107
>gi|419759890|ref|ZP_14286175.1| hypothetical protein H17ap60334_03130 [Thermosipho africanus
H17ap60334]
gi|407514929|gb|EKF49715.1| hypothetical protein H17ap60334_03130 [Thermosipho africanus
H17ap60334]
Length = 252
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H KAA+D +K+ +FT L +++ +A KEGGG DP TN RL + ++ + ++
Sbjct: 2 SGHNKWANIKHRKAAQDAKKSKIFTKLIREIIVAAKEGGG-DPETNPRLRAVLERARAAN 60
Query: 88 MPMTTIENAIK 98
MP TIE +IK
Sbjct: 61 MPKDTIEKSIK 71
>gi|217077314|ref|YP_002335032.1| hypothetical protein THA_1246 [Thermosipho africanus TCF52B]
gi|226696296|sp|B7IHX7.1|Y1246_THEAB RecName: Full=Probable transcriptional regulatory protein
THA_1246
gi|217037169|gb|ACJ75691.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
Length = 252
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H KAA+D +K+ +FT L +++ +A KEGGG DP TN RL + ++ + ++
Sbjct: 2 SGHNKWANIKHRKAAQDAKKSKIFTKLIREIIVAAKEGGG-DPETNPRLRAVLERARAAN 60
Query: 88 MPMTTIENAIK 98
MP TIE +IK
Sbjct: 61 MPKDTIEKSIK 71
>gi|148658442|ref|YP_001278647.1| hypothetical protein RoseRS_4362 [Roseiflexus sp. RS-1]
gi|166227249|sp|A5V1E4.1|Y4362_ROSS1 RecName: Full=Probable transcriptional regulatory protein
RoseRS_4362
gi|148570552|gb|ABQ92697.1| protein of unknown function DUF28 [Roseiflexus sp. RS-1]
Length = 255
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +IR K+ DQ + LFT L++ + +A +EGG DP N+RL +D + ++
Sbjct: 2 SGHSKWHSIRRTKSVLDQRRGQLFTKLARDITIATREGGSGDPEANFRLRLAVDKARAAN 61
Query: 88 MPMTTIENAI 97
MPM I+ AI
Sbjct: 62 MPMENIQRAI 71
>gi|291406345|ref|XP_002719516.1| PREDICTED: translational activator of mitochondrially encoded
cytochrome c oxidase I [Oryctolagus cuniculus]
Length = 294
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ LS ++LAVKE GG +P N LA+ ++ C+
Sbjct: 55 AGHNKWSKVRHIKGPKDTERSRVFSKLSLSIRLAVKE-GGPNPELNSNLANILEVCRSKH 113
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 114 MPKSTIEAALK 124
>gi|166031787|ref|ZP_02234616.1| hypothetical protein DORFOR_01488 [Dorea formicigenerans ATCC
27755]
gi|346306352|ref|ZP_08848510.1| hypothetical protein HMPREF9457_00219 [Dorea formicigenerans
4_6_53AFAA]
gi|166028240|gb|EDR46997.1| DNA-binding regulatory protein, YebC/PmpR family [Dorea
formicigenerans ATCC 27755]
gi|345900157|gb|EGX69985.1| hypothetical protein HMPREF9457_00219 [Dorea formicigenerans
4_6_53AFAA]
Length = 243
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + K+L +AVKEGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKIGKELAVAVKEGGSADPANNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ IK N Y ++ + P G+A +V A++ R +
Sbjct: 62 MPNDTIDRNIKKAEGDANAANYEHITYEGYGPN----------GTAIIVEALTDNRNRTA 111
Query: 148 AN 149
N
Sbjct: 112 TN 113
>gi|239618298|ref|YP_002941620.1| hypothetical protein Kole_1935 [Kosmotoga olearia TBF 19.5.1]
gi|259646525|sp|C5CGU7.1|Y1935_KOSOT RecName: Full=Probable transcriptional regulatory protein
Kole_1935
gi|239507129|gb|ACR80616.1| protein of unknown function DUF28 [Kosmotoga olearia TBF 19.5.1]
Length = 252
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +K+ +FT + ++L +A +E GGTDPNTN L + I+ K ++
Sbjct: 2 SGHNKWANIKHRKMAQDAKKSKIFTKIIRELMVAARE-GGTDPNTNNALRAAIERAKAAN 60
Query: 88 MPMTTIENAIK 98
MP T+E AIK
Sbjct: 61 MPKDTMEKAIK 71
>gi|373114630|ref|ZP_09528841.1| UPF0082 protein [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
gi|371651505|gb|EHO16933.1| UPF0082 protein [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
Length = 76
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DP+ N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDRKRAKLFTKFGRELTIAAKEGGG-DPSFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPEN 105
MP +E AIK PEN
Sbjct: 61 MPKDILERAIKK--EPEN 76
>gi|89895216|ref|YP_518703.1| hypothetical protein DSY2470 [Desulfitobacterium hafniense Y51]
gi|219669647|ref|YP_002460082.1| hypothetical protein Dhaf_3629 [Desulfitobacterium hafniense
DCB-2]
gi|119391309|sp|Q24UN3.1|Y2470_DESHY RecName: Full=Probable transcriptional regulatory protein DSY2470
gi|254765084|sp|B8FQV9.1|Y3629_DESHD RecName: Full=Probable transcriptional regulatory protein
Dhaf_3629
gi|89334664|dbj|BAE84259.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539907|gb|ACL21646.1| protein of unknown function DUF28 [Desulfitobacterium hafniense
DCB-2]
Length = 252
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KA D +K +FT L ++L +A + GGG DPN N+RL ID K ++
Sbjct: 2 SGHSKWANIKHKKAKADAQKGKIFTKLGRELIVAARAGGG-DPNNNFRLKIAIDNAKSAN 60
Query: 88 MPMTTIENAIK 98
MP I+ AI+
Sbjct: 61 MPNDNIQRAIQ 71
>gi|406925965|gb|EKD62317.1| hypothetical protein ACD_52C00227G0001, partial [uncultured
bacterium]
Length = 126
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I K KD ++ LF+ L++ + +AVK GGG DP++N++L +D K +
Sbjct: 2 SGHSKWATIHRQKEVKDAKRGALFSKLARAITIAVKTGGGDDPDSNFKLRIAVDKAKDVN 61
Query: 88 MPMTTIENAIKS 99
MP T IE AI S
Sbjct: 62 MPKTNIERAIAS 73
>gi|74204420|dbj|BAE39960.1| unnamed protein product [Mus musculus]
Length = 294
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L+ + LAVKE GG +P N LA+ ++ C+ +
Sbjct: 55 AGHNKWSKVRHIKGPKDMERSRIFSKLTLSIGLAVKE-GGPNPENNSSLANILELCRSKN 113
Query: 88 MPMTTIENAIKS 99
MP +TIE+A+K+
Sbjct: 114 MPKSTIESALKT 125
>gi|110597084|ref|ZP_01385373.1| Protein of unknown function DUF28 [Chlorobium ferrooxidans DSM
13031]
gi|110341275|gb|EAT59740.1| Protein of unknown function DUF28 [Chlorobium ferrooxidans DSM
13031]
Length = 250
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ +LFT L K++ +A K GGG DPN N RL ID + +S
Sbjct: 2 SGHSKWATIKRKKAATDQKRGSLFTKLVKEITIAAKMGGG-DPNGNPRLRLAIDTARANS 60
Query: 88 MPMTTIENAIK 98
MPM I+ A+K
Sbjct: 61 MPMDNIQRAVK 71
>gi|225715924|gb|ACO13808.1| Coiled-coil domain-containing protein 44 [Esox lucius]
Length = 303
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++HIK KD ++ +F L+ +++AVKEGG ++P N LA+ ++ C+ +
Sbjct: 63 AGHNKWSKVKHIKGPKDAARSRMFMRLAMMIRIAVKEGGSSNPEFNIALANVVEQCRGKN 122
Query: 88 MPMTTIENAIK 98
MP +IE AIK
Sbjct: 123 MPKASIEAAIK 133
>gi|260654959|ref|ZP_05860447.1| glucose-1-phosphate adenylyltransferase [Jonquetella anthropi E3_33
E1]
gi|424844819|ref|ZP_18269430.1| DNA-binding regulatory protein, YebC/PmpR family [Jonquetella
anthropi DSM 22815]
gi|260630274|gb|EEX48468.1| glucose-1-phosphate adenylyltransferase [Jonquetella anthropi E3_33
E1]
gi|363986257|gb|EHM13087.1| DNA-binding regulatory protein, YebC/PmpR family [Jonquetella
anthropi DSM 22815]
Length = 251
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KAA+D ++ LF L K + +A K+GGG DP N RL + ID K +S
Sbjct: 2 SGHSKWANIKHRKAAQDAKRGNLFQKLVKAIIIAAKDGGG-DPAMNVRLKAAIDRAKAAS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
+P + I+ AI+ Y EL+ + +EG A +VS ++ R
Sbjct: 61 VPASNIDRAIQRGTGEIEGAMYEELTYEGY----------GVEGVALVVSVLTDNR 106
>gi|150020877|ref|YP_001306231.1| hypothetical protein Tmel_0985 [Thermosipho melanesiensis BI429]
gi|166227546|sp|A6LLP5.1|Y985_THEM4 RecName: Full=Probable transcriptional regulatory protein
Tmel_0985
gi|149793398|gb|ABR30846.1| protein of unknown function DUF28 [Thermosipho melanesiensis
BI429]
Length = 252
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H KAA+D +++ +FT L +++ +A +EGGG DP TN RL + I+ + ++
Sbjct: 2 SGHNKWANIKHRKAAQDAKRSKIFTKLIREIIVAAREGGG-DPETNPRLRAVIERARAAN 60
Query: 88 MPMTTIENAIK 98
MP TIE +IK
Sbjct: 61 MPKDTIEKSIK 71
>gi|157167701|ref|XP_001655587.1| hypothetical protein AaeL_AAEL002544 [Aedes aegypti]
gi|108882002|gb|EAT46227.1| AAEL002544-PA [Aedes aegypti]
Length = 277
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKWQNIRHIKA D K+ LF LS++++LA+ + GG +P N L + ID K +
Sbjct: 35 AGHSKWQNIRHIKALNDGRKSVLFIKLSRQIRLAI-QAGGANPAVNNTLRAAIDEALKKN 93
Query: 88 MPMTTIENAIK 98
MP +TI+ +K
Sbjct: 94 MPNSTIQGILK 104
>gi|344285241|ref|XP_003414371.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Loxodonta africana]
Length = 297
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RH+K KD E++ +F+ LS ++LA+KE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHVKGPKDAERSRIFSRLSLSIRLAIKE-GGPNPEVNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE ++K
Sbjct: 117 MPKSTIEASLK 127
>gi|374340585|ref|YP_005097321.1| YebC/PmpR family DNA-binding regulatory protein [Marinitoga
piezophila KA3]
gi|372102119|gb|AEX86023.1| DNA-binding regulatory protein, YebC/PmpR family [Marinitoga
piezophila KA3]
Length = 250
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H KAA+D +++ +FT L ++L +A KE GG DP N RL + I+ K ++
Sbjct: 2 SGHNKWANIKHRKAAQDAKRSKIFTKLIRELTVAAKE-GGDDPEANPRLRTAIEKAKDAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP IE AIK + Y+E+
Sbjct: 61 MPKDKIEAAIKKGAGGTDADSYVEI 85
>gi|21753032|dbj|BAC04273.1| unnamed protein product [Homo sapiens]
gi|119614708|gb|EAW94302.1| coiled-coil domain containing 44, isoform CRA_a [Homo sapiens]
Length = 172
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKE-GGPNPEHNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIETALK 127
>gi|82703835|ref|YP_413401.1| hypothetical protein Nmul_A2722 [Nitrosospira multiformis ATCC
25196]
gi|119391326|sp|Q2Y5G2.1|Y2722_NITMU RecName: Full=Probable transcriptional regulatory protein
Nmul_A2722
gi|82411900|gb|ABB76009.1| Protein of unknown function DUF28 [Nitrosospira multiformis ATCC
25196]
Length = 240
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L K++ +A + GGG DPN+N RL +D + +
Sbjct: 2 AGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGG-DPNSNPRLRLAVDKAYEQN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP +E AIK + Y E+ + + G+A LV M+ R
Sbjct: 61 MPKENVERAIKRGSGDLEGVNYEEIRYEGY----------GIAGAAVLVDCMTDNRVRTV 110
Query: 148 AN 149
A+
Sbjct: 111 AD 112
>gi|170032456|ref|XP_001844097.1| cystinosin [Culex quinquefasciatus]
gi|167872567|gb|EDS35950.1| cystinosin [Culex quinquefasciatus]
Length = 560
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKWQNIRHIKA D K+TLF L+++++LA+ + GG +P N L + ID K +
Sbjct: 315 AGHSKWQNIRHIKALNDGRKSTLFIKLARQMRLAM-QAGGPNPAVNATLRAAIDEALKKN 373
Query: 88 MPMTTIENAIK 98
MP +TI+ +K
Sbjct: 374 MPNSTIQGILK 384
>gi|419840467|ref|ZP_14363856.1| DNA-binding regulatory protein, YebC/PmpR family [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|386907717|gb|EIJ72420.1| DNA-binding regulatory protein, YebC/PmpR family [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
Length = 253
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DP+ N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDRKRAKLFTKFGRELTIAAKEGGG-DPSFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIK 98
MP +E AIK
Sbjct: 61 MPKDILERAIK 71
>gi|91793241|ref|YP_562892.1| hypothetical protein Sden_1886 [Shewanella denitrificans OS217]
gi|91715243|gb|ABE55169.1| protein of unknown function DUF28 [Shewanella denitrificans
OS217]
Length = 248
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ LFT ++L +A +E GG+DP+ N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDANPRLRAAIDKSLSNN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|237742690|ref|ZP_04573171.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|294784785|ref|ZP_06750073.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
gi|229430338|gb|EEO40550.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|294486499|gb|EFG33861.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
Length = 249
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KE GG+DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKE-GGSDPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMKYEGYGPA----------GTAFIVEAVT 103
>gi|340754970|ref|ZP_08691697.1| hypothetical protein FSEG_00447 [Fusobacterium sp. D12]
gi|421500202|ref|ZP_15947214.1| DNA-binding regulatory protein, YebC/PmpR family [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|313686005|gb|EFS22840.1| hypothetical protein FSEG_00447 [Fusobacterium sp. D12]
gi|402268806|gb|EJU18170.1| DNA-binding regulatory protein, YebC/PmpR family [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 249
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DP+ N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDRKRAKLFTKFGRELTIAAKEGGG-DPSFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIK 98
MP +E AIK
Sbjct: 61 MPKDILERAIK 71
>gi|297701486|ref|XP_002827741.1| PREDICTED: LOW QUALITY PROTEIN: translational activator of
cytochrome c oxidase 1-like [Pongo abelii]
Length = 297
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKE-GGPNPEHNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIETALK 127
>gi|167629894|ref|YP_001680393.1| hypothetical protein HM1_1824 [Heliobacterium modesticaldum Ice1]
gi|226695946|sp|B0TF65.1|Y1757_HELMI RecName: Full=Probable transcriptional regulatory protein
Helmi_17570
gi|167592634|gb|ABZ84382.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 255
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D +K +FT + ++L +A ++ GG DPN+N+RL I K+++
Sbjct: 2 AGHSKWANIKHRKAKVDAQKGKIFTKIGRELIVAARQ-GGPDPNSNFRLKIAIQKAKENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP I+ AI+ Y EL+ + P G A ++ AM+ R
Sbjct: 61 MPNDNIQRAIQRGAGGTEGANYEELTYEGYGPG----------GVAIMIEAMTDNR 106
>gi|294101864|ref|YP_003553722.1| hypothetical protein [Aminobacterium colombiense DSM 12261]
gi|293616844|gb|ADE56998.1| protein of unknown function DUF28 [Aminobacterium colombiense DSM
12261]
Length = 249
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KAA+D ++ LF L + + +A KEGGG DP+ N RL + ID K +S
Sbjct: 2 SGHSKWANIKHRKAAQDAKRGNLFQKLVRAIIVAAKEGGG-DPSMNVRLKTAIDRAKAAS 60
Query: 88 MPMTTIENAIK 98
+P I AIK
Sbjct: 61 VPNDNITRAIK 71
>gi|310779486|ref|YP_003967819.1| hypothetical protein [Ilyobacter polytropus DSM 2926]
gi|309748809|gb|ADO83471.1| protein of unknown function DUF28 [Ilyobacter polytropus DSM 2926]
Length = 250
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D+++A LFT L K+L ++ KEGGG D N N RL ++ + +
Sbjct: 2 AGHSKWSNIKHRKGAQDKKRAKLFTKLGKELTISAKEGGG-DINFNPRLRLALEKARSGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPT 120
MP I+ AIK Y+E+ + P+
Sbjct: 61 MPKDNIDRAIKKGTGELEGVEYVEIRYEGYGPS 93
>gi|120437646|ref|YP_863332.1| hypothetical protein GFO_3323 [Gramella forsetii KT0803]
gi|117579796|emb|CAL68265.1| protein containing DUF28 [Gramella forsetii KT0803]
Length = 252
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D+++A FT K++ +AVKEGG D TN L + I K +
Sbjct: 2 AGHSKWANIKHRKGAQDKKRAKQFTRAIKEITVAVKEGGSDDSETNPSLRNAIQNAKGVN 61
Query: 88 MPMTTIENAIKSC 100
MP TIE AIK
Sbjct: 62 MPKDTIERAIKKA 74
>gi|50306567|ref|XP_453257.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642391|emb|CAH00353.1| KLLA0D04378p [Kluyveromyces lactis]
Length = 300
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D E+ ++ ++ ++ +AVK GG DP N RLA+ I+ K++
Sbjct: 29 AGHSKWANIKHTKAKNDAERTKIYNKIANQISVAVKLGGSADPAMNIRLATAIELANKNN 88
Query: 88 MPMTTIENAIK 98
+ IENAIK
Sbjct: 89 VTKKVIENAIK 99
>gi|422338848|ref|ZP_16419808.1| hypothetical protein HMPREF9369_00895 [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355371975|gb|EHG19318.1| hypothetical protein HMPREF9369_00895 [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 249
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KE GG+DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKE-GGSDPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|254303430|ref|ZP_04970788.1| hypothetical protein FNP_1082 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323622|gb|EDK88872.1| hypothetical protein FNP_1082 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 249
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KE GG+DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKE-GGSDPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|421526117|ref|ZP_15972726.1| hypothetical protein B437_03491 [Fusobacterium nucleatum ChDC F128]
gi|402257876|gb|EJU08349.1| hypothetical protein B437_03491 [Fusobacterium nucleatum ChDC F128]
Length = 249
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KE GG+DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKE-GGSDPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|27545315|ref|NP_057444.2| translational activator of cytochrome c oxidase 1 [Homo sapiens]
gi|33516968|sp|Q9BSH4.1|TACO1_HUMAN RecName: Full=Translational activator of cytochrome c oxidase 1;
AltName: Full=Coiled-coil domain-containing protein 44;
AltName: Full=Translational activator of
mitochondrially-encoded cytochrome c oxidase I
gi|13477175|gb|AAH05049.1| Coiled-coil domain containing 44 [Homo sapiens]
gi|14043517|gb|AAH07744.1| Coiled-coil domain containing 44 [Homo sapiens]
gi|119614710|gb|EAW94304.1| coiled-coil domain containing 44, isoform CRA_c [Homo sapiens]
gi|189067509|dbj|BAG37768.1| unnamed protein product [Homo sapiens]
gi|312151872|gb|ADQ32448.1| coiled-coil domain containing 44 [synthetic construct]
Length = 297
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKE-GGPNPEHNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIETALK 127
>gi|256846085|ref|ZP_05551543.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
gi|256719644|gb|EEU33199.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
Length = 249
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KE GG+DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKE-GGSDPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|114669816|ref|XP_001146595.1| PREDICTED: translational activator of cytochrome c oxidase 1 [Pan
troglodytes]
gi|397480215|ref|XP_003811383.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Pan paniscus]
gi|410208960|gb|JAA01699.1| translational activator of mitochondrially encoded cytochrome c
oxidase I [Pan troglodytes]
gi|410247554|gb|JAA11744.1| translational activator of mitochondrially encoded cytochrome c
oxidase I [Pan troglodytes]
gi|410287514|gb|JAA22357.1| translational activator of mitochondrially encoded cytochrome c
oxidase I [Pan troglodytes]
gi|410328853|gb|JAA33373.1| translational activator of mitochondrially encoded cytochrome c
oxidase I [Pan troglodytes]
Length = 297
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKE-GGPNPEHNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIETALK 127
>gi|426347109|ref|XP_004041201.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Gorilla gorilla gorilla]
Length = 297
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKE-GGPNPEHNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIETALK 127
>gi|34763880|ref|ZP_00144784.1| Hypothetical Cytosolic Protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|421144841|ref|ZP_15604745.1| hypothetical protein A447_03163 [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|27886343|gb|EAA23614.1| Hypothetical Cytosolic Protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|395488733|gb|EJG09584.1| hypothetical protein A447_03163 [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 249
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KE GG+DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKE-GGSDPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|294782999|ref|ZP_06748323.1| glucose-1-phosphate adenylyltransferase [Fusobacterium sp.
1_1_41FAA]
gi|294479877|gb|EFG27654.1| glucose-1-phosphate adenylyltransferase [Fusobacterium sp.
1_1_41FAA]
Length = 249
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KE GG+DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKE-GGSDPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|340753972|ref|ZP_08690743.1| hypothetical protein FSAG_01578 [Fusobacterium sp. 2_1_31]
gi|422315874|ref|ZP_16397288.1| UPF0082 protein [Fusobacterium periodonticum D10]
gi|229423521|gb|EEO38568.1| hypothetical protein FSAG_01578 [Fusobacterium sp. 2_1_31]
gi|404591835|gb|EKA93860.1| UPF0082 protein [Fusobacterium periodonticum D10]
Length = 249
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KE GG+DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKE-GGSDPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|262066092|ref|ZP_06025704.1| glucose-1-phosphate adenylyltransferase [Fusobacterium
periodonticum ATCC 33693]
gi|291380187|gb|EFE87705.1| glucose-1-phosphate adenylyltransferase [Fusobacterium
periodonticum ATCC 33693]
Length = 249
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KE GG+DPN N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKE-GGSDPNFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + + E+ + P G+A +V A++
Sbjct: 61 MPKDILERAIKKGSGELEGVDFTEMRYEGYGPA----------GTAFIVEAVT 103
>gi|78170347|gb|ABB27443.1| Protein of unknown function DUF28 [Chlorobium chlorochromatii CaD3]
Length = 262
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ LFT L K++ +A K GGG DP N RL ID + +S
Sbjct: 14 SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGG-DPTGNPRLRLAIDTARSNS 72
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MPM I+ AIK G EL + W
Sbjct: 73 MPMDNIQRAIKK--------GTGELDGVSWDE 96
>gi|395826097|ref|XP_003786256.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Otolemur garnettii]
Length = 297
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 24 LVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYC 83
+V AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C
Sbjct: 54 VVAPAGHNKWSKVRHIKGPKDAERSRIFSKLCLNIRLAVKE-GGPNPELNSNLANILEVC 112
Query: 84 KKSSMPMTTIENAIK 98
+ MP +TIE A+K
Sbjct: 113 RSKHMPKSTIEAALK 127
>gi|162319775|ref|YP_378486.2| hypothetical protein Cag_0165 [Chlorobium chlorochromatii CaD3]
gi|118574097|sp|Q3AU82.2|Y165_CHLCH RecName: Full=Probable transcriptional regulatory protein Cag_0165
Length = 250
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ LFT L K++ +A K GGG DP N RL ID + +S
Sbjct: 2 SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGG-DPTGNPRLRLAIDTARSNS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MPM I+ AIK G EL + W
Sbjct: 61 MPMDNIQRAIKK--------GTGELDGVSWDE 84
>gi|392394533|ref|YP_006431135.1| YebC/PmpR family DNA-binding regulatory protein
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390525611|gb|AFM01342.1| DNA-binding regulatory protein, YebC/PmpR family
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 252
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D +K +FT L ++L +A + GGG DPN N+RL ++ K ++
Sbjct: 2 AGHSKWANIKHKKAKADAQKGKIFTKLGRELIVAARAGGG-DPNNNFRLKIAVENAKSAN 60
Query: 88 MPMTTIENAIK 98
MP I+ AI+
Sbjct: 61 MPNDNIQRAIQ 71
>gi|395532973|ref|XP_003768538.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Sarcophilus harrisii]
Length = 308
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RH+K KD ++ +FT LS+ ++ AVKE GG +P N LA+ + C+ +
Sbjct: 69 AGHNKWSKVRHVKGPKDTARSQVFTKLSRLIRFAVKE-GGPNPELNSNLANLLKLCRSKN 127
Query: 88 MPMTTIENAIKS 99
MP +TIE A+KS
Sbjct: 128 MPKSTIEAALKS 139
>gi|225849643|ref|YP_002729877.1| hypothetical protein PERMA_0079 [Persephonella marina EX-H1]
gi|254799888|sp|C0QT62.1|Y079_PERMH RecName: Full=Probable transcriptional regulatory protein
PERMA_0079
gi|225645009|gb|ACO03195.1| conserved hypothetical protein [Persephonella marina EX-H1]
Length = 250
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KA D ++ +FT + +++ +A ++GGG DP N RL I+ KK++
Sbjct: 2 AGHSKWHNIRHKKAKMDAKRGQMFTKIIREITVAARQGGG-DPEFNPRLRIAIEKAKKAN 60
Query: 88 MPMTTIENAIK 98
MP+ IE AIK
Sbjct: 61 MPVENIERAIK 71
>gi|156843104|ref|XP_001644621.1| hypothetical protein Kpol_526p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156115268|gb|EDO16763.1| hypothetical protein Kpol_526p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 289
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 27 YAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGG-TDPNTNYRLASTIDYCKK 85
++GH+KW I+H K D EK LF+ ++ ++ LAVK GGG TDPN N RLA+ ++ K
Sbjct: 35 FSGHNKWSTIKHDKMKNDSEKNKLFSKMANQISLAVKLGGGSTDPNLNVRLAAAMETAAK 94
Query: 86 SSMPMTTIENAIKSC 100
+++ IENAIK
Sbjct: 95 NNVTKKVIENAIKKA 109
>gi|160902273|ref|YP_001567854.1| hypothetical protein Pmob_0807 [Petrotoga mobilis SJ95]
gi|189040610|sp|A9BHC2.1|Y807_PETMO RecName: Full=Probable transcriptional regulatory protein
Pmob_0807
gi|160359917|gb|ABX31531.1| protein of unknown function DUF28 [Petrotoga mobilis SJ95]
Length = 251
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +++ +FT L ++L +A +EGGG DP +N RL + ++ K ++
Sbjct: 2 SGHNKWANIKHRKGAQDAKRSQMFTKLIRELTIAAREGGG-DPESNPRLRTAVENAKAAN 60
Query: 88 MPMTTIENAIK 98
MP IE+AIK
Sbjct: 61 MPKDKIESAIK 71
>gi|298529994|ref|ZP_07017396.1| protein of unknown function DUF28 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509368|gb|EFI33272.1| protein of unknown function DUF28 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 249
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +K +FT ++K++ LA ++GGG +P+ N RL + ID K ++
Sbjct: 2 AGHSKWHNIQHRKGRQDAKKGKIFTKVTKEIMLAARDGGG-EPDKNPRLRAAIDSAKSAN 60
Query: 88 MPMTTIENAIK 98
+P IE AIK
Sbjct: 61 LPKDKIETAIK 71
>gi|435854549|ref|YP_007315868.1| DNA-binding regulatory protein, YebC/PmpR family [Halobacteroides
halobius DSM 5150]
gi|433670960|gb|AGB41775.1| DNA-binding regulatory protein, YebC/PmpR family [Halobacteroides
halobius DSM 5150]
Length = 254
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ +A LF+ L KK+ +A +EGGG DP N L I K ++
Sbjct: 2 AGHSKWHNIKHKKQKEDRRRAKLFSKLVKKITVAAREGGG-DPEVNNDLELVIQKAKDAN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKENIERAIK 71
>gi|212556643|gb|ACJ29097.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 247
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL + ID ++
Sbjct: 2 AGHSKWDNIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRAAIDKSLSNN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|149723391|ref|XP_001501203.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Equus caballus]
Length = 297
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LAS ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDTERSRIFSKLCLSIRLAVKE-GGPNPELNSNLASILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE ++K
Sbjct: 117 MPKSTIEASLK 127
>gi|254430110|ref|ZP_05043814.1| hypothetical protein ADG881_3377 [Alcanivorax sp. DG881]
gi|196192936|gb|EDX87898.1| hypothetical protein ADG881_3377 [Alcanivorax sp. DG881]
Length = 93
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L +A K GGG +PN N RL + ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKMGGG-EPNDNPRLRAAIDKALGQN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLP 116
M TI+ A+K ++ E+S +P
Sbjct: 61 MTRDTIDRAVKRGAGGDDDGNMDEISDVP 89
>gi|127513006|ref|YP_001094203.1| hypothetical protein Shew_2078 [Shewanella loihica PV-4]
gi|126638301|gb|ABO23944.1| protein of unknown function DUF28 [Shewanella loihica PV-4]
Length = 248
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|402900715|ref|XP_003913314.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Papio anubis]
Length = 297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKE-GGPNPEHNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIEAALK 127
>gi|21674483|ref|NP_662548.1| hypothetical protein CT1665 [Chlorobium tepidum TLS]
gi|33517041|sp|Q8KBW7.1|Y1665_CHLTE RecName: Full=Probable transcriptional regulatory protein CT1665
gi|21647672|gb|AAM72890.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 251
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ +LFT L K++ +A K GGG DP N RL ID + +S
Sbjct: 2 SGHSKWATIKRKKAATDQKRGSLFTKLVKEITIAAKMGGG-DPTGNPRLRLAIDTARANS 60
Query: 88 MPMTTIENAIK 98
MPM I+ AIK
Sbjct: 61 MPMDNIQRAIK 71
>gi|355754279|gb|EHH58244.1| hypothetical protein EGM_08048 [Macaca fascicularis]
gi|383418891|gb|AFH32659.1| translational activator of cytochrome c oxidase 1 [Macaca mulatta]
gi|384944372|gb|AFI35791.1| translational activator of cytochrome c oxidase 1 [Macaca mulatta]
Length = 297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKE-GGPNPEHNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIEAALK 127
>gi|374584468|ref|ZP_09657560.1| UPF0082 protein yeeN [Leptonema illini DSM 21528]
gi|373873329|gb|EHQ05323.1| UPF0082 protein yeeN [Leptonema illini DSM 21528]
Length = 250
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 15/152 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K D+ + +FT LSK+L ++ + GG+DP+ N RL + + ++
Sbjct: 2 AGHSKWANIKHRKDGADRRRGRIFTKLSKELMVSARL-GGSDPDANPRLRIAMTKARSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
M TIE A+K G EL L ++ + + G +V AM+ + R
Sbjct: 61 MTTDTIERAVKK--------GAGELEGLTYEDVFY--EIYAPGGVGVIVEAMTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITR--MKQASVLL 175
P + NR G L S +TR M++ +L+
Sbjct: 111 PEIKSMLNRFGGSLAESNAVTRLFMQKGQILI 142
>gi|384489854|gb|EIE81076.1| hypothetical protein RO3G_05781 [Rhizopus delemar RA 99-880]
Length = 274
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
R+AGH+KW ++H K AKD +K+ L++ +S ++ ++ GGTDP+ N +LA+ ++ K
Sbjct: 31 RFAGHNKWSKVKHTKGAKDAKKSILYSKISLEI-VSSARSGGTDPSVNNKLAAVLNRAKA 89
Query: 86 SSMPMTTIENAIK 98
+SMP +IENA+K
Sbjct: 90 ASMPKDSIENALK 102
>gi|325263862|ref|ZP_08130595.1| glucose-1-phosphate adenylyltransferase [Clostridium sp. D5]
gi|324030900|gb|EGB92182.1| glucose-1-phosphate adenylyltransferase [Clostridium sp. D5]
Length = 243
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT L ++L +AVKEGGG DPN N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKVFTKLGRELAVAVKEGGGPDPNNNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSC 100
MP TI+ IK
Sbjct: 62 MPNDTIDRNIKKA 74
>gi|332243140|ref|XP_003270740.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Nomascus leucogenys]
Length = 297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKE-GGPNPEHNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIEAALK 127
>gi|348560339|ref|XP_003465971.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Cavia porcellus]
Length = 293
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ LS ++LAVKE GG +P N L + ++ C+
Sbjct: 55 AGHNKWSKVRHIKGPKDAERSRIFSKLSLSIRLAVKE-GGPNPQLNSNLFNILEVCRSKQ 113
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 114 MPKSTIEAALK 124
>gi|302565124|ref|NP_001181632.1| translational activator of cytochrome c oxidase 1 [Macaca mulatta]
gi|355568818|gb|EHH25099.1| hypothetical protein EGK_08861 [Macaca mulatta]
gi|380790593|gb|AFE67172.1| translational activator of cytochrome c oxidase 1 [Macaca mulatta]
Length = 297
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKE-GGPNPEHNSNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 117 MPKSTIEAALK 127
>gi|374288966|ref|YP_005036051.1| hypothetical protein BMS_2290 [Bacteriovorax marinus SJ]
gi|301167507|emb|CBW27090.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 249
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 14/142 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH K A+D ++ +FT L K++ +AVK GGG+DP N RL + + +
Sbjct: 2 AGHSKWANIRHRKGAQDAKRGKIFTKLIKEITVAVKTGGGSDPEMNPRLRLALQNARGQN 61
Query: 88 MPMTTIENAI-KSCNVPENIYGYLELSCLPWKPT-LSIARLVSLEGSACLVSAMSRVRF- 144
+P TI+ AI K+ V + Y+E + + P +++ + + + VSA+ R F
Sbjct: 62 LPKDTIQRAIDKASGVGGD--DYIETTFEGYGPDGVAVFVETATDNNTRTVSAV-RAAFN 118
Query: 145 --------PPSANFISNRLGLF 158
FI +R G+F
Sbjct: 119 KYNGSLGKDGCLQFIFDRKGIF 140
>gi|56460196|ref|YP_155477.1| hypothetical protein IL1088 [Idiomarina loihiensis L2TR]
gi|67462022|sp|Q5QYV3.1|Y1088_IDILO RecName: Full=Probable transcriptional regulatory protein IL1088
gi|56179206|gb|AAV81928.1| Uncharacterized conserved enzyme [Idiomarina loihiensis L2TR]
Length = 249
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L +++ ++ +EGGG DP TN RL + ID ++
Sbjct: 2 AGHSKWSNIKHRKAAQDAKRGKIFTKLIREITVSAREGGG-DPETNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI+ A+K
Sbjct: 61 MKRDTIDTAVK 71
>gi|126308640|ref|XP_001376698.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Monodelphis domestica]
Length = 293
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++HIK KD ++ +FT LS+ ++ AVKE GG +P N LA+ + C+ +
Sbjct: 54 AGHNKWSKVKHIKGPKDTARSQVFTKLSRLIRFAVKE-GGPNPEFNSNLANILKLCRSKN 112
Query: 88 MPMTTIENAIKS 99
MP +TIE A+KS
Sbjct: 113 MPKSTIEAALKS 124
>gi|157962186|ref|YP_001502220.1| hypothetical protein Spea_2365 [Shewanella pealeana ATCC 700345]
gi|157847186|gb|ABV87685.1| protein of unknown function DUF28 [Shewanella pealeana ATCC
700345]
Length = 247
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRAAIDKSLSNN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|238916834|ref|YP_002930351.1| hypothetical protein EUBELI_00902 [Eubacterium eligens ATCC 27750]
gi|259710169|sp|C4Z5P5.1|Y902_EUBE2 RecName: Full=Probable transcriptional regulatory protein
EUBELI_00902
gi|238872194|gb|ACR71904.1| glucose-1-phosphate adenylyltransferase [Eubacterium eligens ATCC
27750]
Length = 247
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI H KAA D K +FT L K+L +AVKE GG D N N +L + CK ++
Sbjct: 2 SGHSKFANIAHKKAANDAAKGKIFTRLGKELMIAVKE-GGPDVNNNSKLRQVVAKCKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ AIK ++ Y ++ + P G+A +V A++ R +
Sbjct: 61 MPNDTIDRAIKKA-ASNDMSNYESVTYEGYGPN----------GTAIIVEALTDNRNRAA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNIRS 114
>gi|195146878|ref|XP_002014411.1| GL19178 [Drosophila persimilis]
gi|194106364|gb|EDW28407.1| GL19178 [Drosophila persimilis]
Length = 244
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D+ K+ LF ++++L+LA+++G DP N L S I+ K +
Sbjct: 2 AGHSKWANIKHTKAKNDEFKSALFAKIARQLRLAIQDGNSADPAINPSLQSEIEKALKQN 61
Query: 88 MPMTTIENAI 97
MPM+TI+ +
Sbjct: 62 MPMSTIQKTL 71
>gi|225181977|ref|ZP_03735410.1| protein of unknown function DUF28 [Dethiobacter alkaliphilus AHT 1]
gi|225167339|gb|EEG76157.1| protein of unknown function DUF28 [Dethiobacter alkaliphilus AHT 1]
Length = 251
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D +K +FT +SK++ AV++GGG DPN N+RL + + +
Sbjct: 2 AGHSKWANIKHRKARVDAQKGKVFTKISKEIMAAVRQGGG-DPNNNFRLRLALQKARSVN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP I+ AI+ N E IY GY
Sbjct: 61 MPNDNIQRAIQKGAGELEGTNFEEIIYEGY 90
>gi|193212194|ref|YP_001998147.1| hypothetical protein Cpar_0525 [Chlorobaculum parvum NCIB 8327]
gi|226707685|sp|B3QLZ4.1|Y525_CHLP8 RecName: Full=Probable transcriptional regulatory protein
Cpar_0525
gi|193085671|gb|ACF10947.1| protein of unknown function DUF28 [Chlorobaculum parvum NCIB
8327]
Length = 251
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ LFT L K++ +A K GGG DP+ N RL ID + +S
Sbjct: 2 SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGG-DPSGNPRLRLAIDTARANS 60
Query: 88 MPMTTIENAIK 98
MPM I+ AIK
Sbjct: 61 MPMDNIQRAIK 71
>gi|126002599|ref|XP_001382221.1| GA18554 [Drosophila pseudoobscura pseudoobscura]
gi|54640349|gb|EAL29332.1| GA18554 [Drosophila pseudoobscura pseudoobscura]
Length = 244
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D+ K+ LF ++++L+LA+++G DP N L S I+ K +
Sbjct: 2 AGHSKWANIKHTKAKNDEFKSALFAKIARQLRLAIQDGNSADPAINPSLQSEIEKALKQN 61
Query: 88 MPMTTIENAI 97
MPM+TI+ +
Sbjct: 62 MPMSTIQKTL 71
>gi|34498578|ref|NP_902793.1| hypothetical protein CV_3123 [Chromobacterium violaceum ATCC
12472]
gi|49037282|sp|Q7NTD5.1|Y3123_CHRVO RecName: Full=Probable transcriptional regulatory protein CV_3123
gi|34104432|gb|AAQ60790.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 241
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ +A K GGG D N N RL +D K S
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKIFTRLIKEITVAAKMGGG-DANMNPRLRLAVDKAKAES 60
Query: 88 MPMTTIENAIK 98
MP IENAIK
Sbjct: 61 MPKDNIENAIK 71
>gi|321463273|gb|EFX74290.1| hypothetical protein DAPPUDRAFT_109067 [Daphnia pulex]
Length = 240
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H+K AKD E+ATL + ++++ A+KE G DP N +L+ +D + +
Sbjct: 2 AGHSKWANIKHVKGAKDAERATLHLRIFRQIRAAIKEHGSADPKQNIKLSHLVDQARHHN 61
Query: 88 MPMTTIENAIKSCN 101
+P +++ +K+ +
Sbjct: 62 VPSEKLKHMLKNAD 75
>gi|417398528|gb|JAA46297.1| Putative translational activator of cytochrome c oxidase 1
[Desmodus rotundus]
Length = 297
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAV+E GG +P N +LA ++ C++
Sbjct: 58 AGHNKWSKVRHIKGPKDTERSRIFSKLCLSIRLAVRE-GGPNPELNSQLAHILEVCRQKH 116
Query: 88 MPMTTIENAIKS 99
MP TIE ++K+
Sbjct: 117 MPKATIEASLKT 128
>gi|289578206|ref|YP_003476833.1| hypothetical protein Thit_1001 [Thermoanaerobacter italicus Ab9]
gi|297544487|ref|YP_003676789.1| hypothetical protein Tmath_1058 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289527919|gb|ADD02271.1| protein of unknown function DUF28 [Thermoanaerobacter italicus Ab9]
gi|296842262|gb|ADH60778.1| protein of unknown function DUF28 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 246
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K D +K +FT L+K + A KEGGG DPNTN +L I+ K ++
Sbjct: 2 SGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGG-DPNTNSKLRDAIEKAKANN 60
Query: 88 MPMTTIENAIKS-------CNVPENIY-GY 109
+P I+ AIK N+ E IY GY
Sbjct: 61 LPNENIQRAIKKGTGELGGANLEEVIYEGY 90
>gi|373496583|ref|ZP_09587129.1| UPF0082 protein [Fusobacterium sp. 12_1B]
gi|404368611|ref|ZP_10973961.1| UPF0082 protein [Fusobacterium ulcerans ATCC 49185]
gi|313687909|gb|EFS24744.1| UPF0082 protein [Fusobacterium ulcerans ATCC 49185]
gi|371965472|gb|EHO82972.1| UPF0082 protein [Fusobacterium sp. 12_1B]
Length = 249
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D+++A LFT ++L +A KEGGG DP+ N RL I+ K +
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGG-DPSFNPRLRLAIEKAKAGN 60
Query: 88 MPMTTIENAIK 98
MP ++ AIK
Sbjct: 61 MPKDILDRAIK 71
>gi|196228181|ref|ZP_03127048.1| protein of unknown function DUF28 [Chthoniobacter flavus Ellin428]
gi|196227584|gb|EDY22087.1| protein of unknown function DUF28 [Chthoniobacter flavus Ellin428]
Length = 252
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW ++HIK DQ++ LF+ L+K++ +A K GGG DP N RL S I + S
Sbjct: 2 AGHSKWSKVKHIKGPLDQKRGQLFSKLAKEITVAAKMGGG-DPGGNPRLRSAILAARAQS 60
Query: 88 MPMTTIENAIK---------SCNVPENIY 107
MP I+ AIK + N+ E++Y
Sbjct: 61 MPNDNIDRAIKRGTGAEGTEASNIEESVY 89
>gi|195473565|ref|XP_002089063.1| GE18915 [Drosophila yakuba]
gi|194175164|gb|EDW88775.1| GE18915 [Drosophila yakuba]
Length = 246
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA KD +A LF +S+++++A++EG DP N L + I+ K +
Sbjct: 2 AGHSKWANIKHTKALKDGARAALFAKISRQIRMAIQEGNSADPAINSLLRTEIERALKQN 61
Query: 88 MPMTTIENAI 97
MP TI+N +
Sbjct: 62 MPSGTIQNTL 71
>gi|333370430|ref|ZP_08462436.1| glucose-1-phosphate adenylyltransferase [Desmospora sp. 8437]
gi|332977888|gb|EGK14637.1| glucose-1-phosphate adenylyltransferase [Desmospora sp. 8437]
Length = 275
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 7 PLGVYKVHRLIPDEGYLLVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGG 66
P G + + PD ++ AGHSKW+NI+H K +D + LF L++++ +A +EGG
Sbjct: 9 PTGFFPT--IYPDLDKEVIGMAGHSKWKNIQHRKGRQDALRGKLFAKLAREISVAAREGG 66
Query: 67 GTDPNTNYRLASTIDYCKKSSMPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARL 126
G DP+ N RL I + +MP IE AI E Y ++ + P
Sbjct: 67 G-DPDQNQRLRLAISKARSQNMPNDNIERAIHRGTGAEGGSNYEAVTYEGYGPG------ 119
Query: 127 VSLEGSACLVSAMSRVRFPPSAN 149
G+A + A++ R +A+
Sbjct: 120 ----GAAVMAEALTDNRNRTAAD 138
>gi|345017505|ref|YP_004819858.1| hypothetical protein Thewi_1151 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|392941148|ref|ZP_10306792.1| DNA-binding regulatory protein, YebC/PmpR family
[Thermoanaerobacter siderophilus SR4]
gi|344032848|gb|AEM78574.1| UPF0082 protein yeeN [Thermoanaerobacter wiegelii Rt8.B1]
gi|392292898|gb|EIW01342.1| DNA-binding regulatory protein, YebC/PmpR family
[Thermoanaerobacter siderophilus SR4]
Length = 246
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K D +K +FT L+K + A KEGGG DPNTN +L I+ K ++
Sbjct: 2 SGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGG-DPNTNSKLRDAIEKAKANN 60
Query: 88 MPMTTIENAIKS-------CNVPENIY-GY 109
+P I+ AIK N+ E IY GY
Sbjct: 61 LPNENIQRAIKKGTGELGGANLEEVIYEGY 90
>gi|326390108|ref|ZP_08211669.1| protein of unknown function DUF28 [Thermoanaerobacter ethanolicus
JW 200]
gi|325993756|gb|EGD52187.1| protein of unknown function DUF28 [Thermoanaerobacter ethanolicus
JW 200]
Length = 246
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K D +K +FT L+K + A KEGGG DPNTN +L I+ K ++
Sbjct: 2 SGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGG-DPNTNSKLRDAIEKAKANN 60
Query: 88 MPMTTIENAIKS-------CNVPENIY-GY 109
+P I+ AIK N+ E IY GY
Sbjct: 61 LPNENIQRAIKKGTGELGGANLEEVIYEGY 90
>gi|372273405|ref|ZP_09509453.1| hypothetical protein MstaS_20103 [Marinobacterium stanieri S30]
Length = 245
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L +A KEGGG P N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKEGGGN-PEDNPRLRAAVDKALGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
M TIE AI Y EL+ + P +A LV C+ ++R
Sbjct: 61 MKKDTIEKAIARGAGGGEGDNYDELTYEGYGPN-GVAILVE-----CMTDNVNRTVSQVR 114
Query: 148 ANF 150
A F
Sbjct: 115 AAF 117
>gi|195339719|ref|XP_002036464.1| GM18104 [Drosophila sechellia]
gi|194130344|gb|EDW52387.1| GM18104 [Drosophila sechellia]
Length = 246
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA KD +A LF +S+++++A++EG DP N L + I+ K +
Sbjct: 2 AGHSKWANIKHTKALKDGARAALFAKISRQIRMAIQEGNSADPAINSLLRTEIERALKQN 61
Query: 88 MPMTTIENAI 97
MP TI+N +
Sbjct: 62 MPSGTIQNTL 71
>gi|219849466|ref|YP_002463899.1| hypothetical protein Cagg_2594 [Chloroflexus aggregans DSM 9485]
gi|254765050|sp|B8G4I7.1|Y2594_CHLAD RecName: Full=Probable transcriptional regulatory protein
Cagg_2594
gi|219543725|gb|ACL25463.1| protein of unknown function DUF28 [Chloroflexus aggregans DSM
9485]
Length = 252
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW IR K+A DQ + LFT L++ + +A +EGG DP N+RL I+ + ++
Sbjct: 2 SGHSKWHTIRRAKSANDQRRGQLFTKLARDITIATREGGSGDPELNFRLRLAIEKARANN 61
Query: 88 MPMTTIENAIK 98
MP I+ AI+
Sbjct: 62 MPNENIQRAIE 72
>gi|95931131|ref|ZP_01313856.1| protein of unknown function DUF28 [Desulfuromonas acetoxidans DSM
684]
gi|95132821|gb|EAT14495.1| protein of unknown function DUF28 [Desulfuromonas acetoxidans DSM
684]
Length = 248
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT L K++ +A K GGG D N RL + +D K +
Sbjct: 2 AGHSKWANIKHRKGAQDAKRGKIFTKLIKEITVAAKIGGG-DLEANPRLRTAVDKAKGGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE AIK + Y E + + P G A +V M+ R
Sbjct: 61 MPKDTIERAIKKGTGDLDGVSYEEGTMEGYGPG----------GVAVMVEIMTDNRTRTV 110
Query: 148 AN 149
A+
Sbjct: 111 AD 112
>gi|167037422|ref|YP_001665000.1| hypothetical protein Teth39_1009 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040089|ref|YP_001663074.1| hypothetical protein Teth514_1449 [Thermoanaerobacter sp. X514]
gi|256752594|ref|ZP_05493448.1| protein of unknown function DUF28 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914172|ref|ZP_07131488.1| protein of unknown function DUF28 [Thermoanaerobacter sp. X561]
gi|307724592|ref|YP_003904343.1| hypothetical protein Thet_1453 [Thermoanaerobacter sp. X513]
gi|320115835|ref|YP_004185994.1| hypothetical protein Thebr_1035 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|226734048|sp|B0K951.1|Y1009_THEP3 RecName: Full=Probable transcriptional regulatory protein
Teth39_1009
gi|226734168|sp|B0K0L3.1|Y1449_THEPX RecName: Full=Probable transcriptional regulatory protein
Teth514_1449
gi|166854329|gb|ABY92738.1| protein of unknown function DUF28 [Thermoanaerobacter sp. X514]
gi|166856256|gb|ABY94664.1| protein of unknown function DUF28 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256748532|gb|EEU61582.1| protein of unknown function DUF28 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889107|gb|EFK84253.1| protein of unknown function DUF28 [Thermoanaerobacter sp. X561]
gi|307581653|gb|ADN55052.1| protein of unknown function DUF28 [Thermoanaerobacter sp. X513]
gi|319928926|gb|ADV79611.1| protein of unknown function DUF28 [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 246
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K D +K +FT L+K + A KEGGG DPNTN +L I+ K ++
Sbjct: 2 SGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGG-DPNTNSKLRDAIEKAKANN 60
Query: 88 MPMTTIENAIKS-------CNVPENIY-GY 109
+P I+ AIK N+ E IY GY
Sbjct: 61 LPNENIQRAIKKGTGELGGANLEEVIYEGY 90
>gi|24583305|ref|NP_609366.2| CG4957 [Drosophila melanogaster]
gi|22946120|gb|AAF52894.2| CG4957 [Drosophila melanogaster]
Length = 246
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA KD +A LF +S+++++A++EG DP N L + I+ K +
Sbjct: 2 AGHSKWANIKHTKALKDGARAALFAKISRQIRMAIQEGNSADPAINSLLRTEIERALKQN 61
Query: 88 MPMTTIENAI 97
MP TI+N +
Sbjct: 62 MPSGTIQNTL 71
>gi|431908887|gb|ELK12479.1| Translational activator of cytochrome c oxidase 1 [Pteropus alecto]
Length = 297
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDTERSRIFSKLCLSIRLAVKE-GGPNPELNNNLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE ++K
Sbjct: 117 MPKSTIEASLK 127
>gi|17861824|gb|AAL39389.1| GM01936p [Drosophila melanogaster]
Length = 246
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA KD +A LF +S+++++A++EG DP N L + I+ K +
Sbjct: 2 AGHSKWANIKHTKALKDGARAALFAKISRQIRMAIQEGNSADPAINSLLRTEIERALKQN 61
Query: 88 MPMTTIENAI 97
MP TI+N +
Sbjct: 62 MPSGTIQNTL 71
>gi|194335779|ref|YP_002017573.1| hypothetical protein Ppha_0657 [Pelodictyon phaeoclathratiforme
BU-1]
gi|226707997|sp|B4SDW5.1|Y657_PELPB RecName: Full=Probable transcriptional regulatory protein Ppha_0657
gi|194308256|gb|ACF42956.1| protein of unknown function DUF28 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 250
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KA DQ++ +LFT L K++ +A K GGG DP N RL ID + +S
Sbjct: 2 SGHSKWATIKRKKAVTDQKRGSLFTKLVKEITIAAKMGGG-DPAGNPRLRLAIDTARDNS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MPM I+ AIK G EL + W
Sbjct: 61 MPMDNIQRAIKK--------GTGELEGVTWDE 84
>gi|410981480|ref|XP_003997096.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Felis catus]
Length = 297
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 58 AGHNKWSKVRHIKGPKDAERSRIFSKLCLSIRLAVKE-GGPNPELNSSLANILEVCRSKH 116
Query: 88 MPMTTIENAIK 98
MP +TIE ++K
Sbjct: 117 MPKSTIEASLK 127
>gi|359320277|ref|XP_003639299.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Canis lupus familiaris]
Length = 298
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LAVKE GG +P N LA+ ++ C+
Sbjct: 59 AGHNKWSKVRHIKGPKDAERSRIFSKLCLSIRLAVKE-GGPNPELNSSLANILEVCRSKH 117
Query: 88 MPMTTIENAIK 98
MP +TIE ++K
Sbjct: 118 MPKSTIEASLK 128
>gi|359339056|gb|AEV23900.1| FI16717p1 [Drosophila melanogaster]
Length = 268
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA KD +A LF +S+++++A++EG DP N L + I+ K +
Sbjct: 24 AGHSKWANIKHTKALKDGARAALFAKISRQIRMAIQEGNSADPAINSLLRTEIERALKQN 83
Query: 88 MPMTTIENAI 97
MP TI+N +
Sbjct: 84 MPSGTIQNTL 93
>gi|313673194|ref|YP_004051305.1| hypothetical protein Calni_1234 [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939950|gb|ADR19142.1| protein of unknown function DUF28 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 242
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D +K +FT ++K+L +A K G DP N RL +D K ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKKGKIFTKIAKELTVAAKLGQSGDPEFNPRLRLALDKAKAAN 61
Query: 88 MPMTTIENAIK 98
MP +E AIK
Sbjct: 62 MPKDNVERAIK 72
>gi|255719962|ref|XP_002556261.1| KLTH0H08910p [Lachancea thermotolerans]
gi|238942227|emb|CAR30399.1| KLTH0H08910p [Lachancea thermotolerans CBS 6340]
Length = 286
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGG-TDPNTNYRLASTIDYCK 84
R +GH+KW I+H KA D EK LF + ++ LAVK GGG TDP N RLA+ I+
Sbjct: 23 RLSGHNKWSTIKHDKAKNDAEKNKLFNKFANQIALAVKLGGGSTDPALNIRLAAAIESAN 82
Query: 85 KSSMPMTTIENAIK 98
K+++ +ENAIK
Sbjct: 83 KNNVTKRVVENAIK 96
>gi|301778317|ref|XP_002924567.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Ailuropoda melanoleuca]
gi|281351666|gb|EFB27250.1| hypothetical protein PANDA_013943 [Ailuropoda melanoleuca]
Length = 298
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F+ L ++LA+KE GG +P N LA+ ++ C+
Sbjct: 59 AGHNKWSKVRHIKGPKDNERSRIFSKLCLSIRLAIKE-GGPNPEHNSSLANILEVCRSKH 117
Query: 88 MPMTTIENAIK 98
MP +TIE ++K
Sbjct: 118 MPKSTIEASLK 128
>gi|163785080|ref|ZP_02179796.1| hypothetical protein HG1285_07991 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879653|gb|EDP73441.1| hypothetical protein HG1285_07991 [Hydrogenivirga sp. 128-5-R1-1]
Length = 250
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KA D ++ +FT L +++ +A ++GGG DP N RL I+ K+ +
Sbjct: 2 AGHSKWHNIRHKKAKMDAKRGQIFTKLIREITIAARQGGG-DPEFNPRLRIAIEKAKEHN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK Y E++ + P EG A +V ++ R
Sbjct: 61 MPAENIERAIKRGTGELEGVNYEEITYEGYGP----------EGVAVIVECVTDNR 106
>gi|288939914|ref|YP_003442154.1| hypothetical protein Alvin_0153 [Allochromatium vinosum DSM 180]
gi|288895286|gb|ADC61122.1| protein of unknown function DUF28 [Allochromatium vinosum DSM 180]
Length = 249
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D+++ ++T L +++ +A +EGGG DP N RL +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDKQRGKVWTKLIREVTVAAREGGG-DPGANPRLRLAMDKAFGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP T+E AIK Y E+ + P G A +V MS R
Sbjct: 61 MPRDTVERAIKRGAGGTEGENYEEIRYEGYGPG----------GVAIMVDCMSDNR 106
>gi|194859698|ref|XP_001969432.1| GG10101 [Drosophila erecta]
gi|190661299|gb|EDV58491.1| GG10101 [Drosophila erecta]
Length = 246
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA KD +A LF +S+++++A++EG DP N L + I+ K +
Sbjct: 2 AGHSKWANIKHTKALKDGARAALFAKISRQIRIAIQEGNSADPAINSLLRTEIERALKQN 61
Query: 88 MPMTTIENAI 97
MP TI+N +
Sbjct: 62 MPSGTIQNTL 71
>gi|196001611|ref|XP_002110673.1| hypothetical protein TRIADDRAFT_50096 [Trichoplax adhaerens]
gi|190586624|gb|EDV26677.1| hypothetical protein TRIADDRAFT_50096 [Trichoplax adhaerens]
Length = 232
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW IRH KAA D ++ F+ + + AVKE GG DP +NYRLAS I K +
Sbjct: 2 AGHNKWSKIRHKKAANDASRSNAFSKIIRDATHAVKE-GGPDPESNYRLASCISQAKSIN 60
Query: 88 MPMTTIENAIKSC 100
MP T+E AIK+
Sbjct: 61 MPKATLEYAIKNA 73
>gi|389843525|ref|YP_006345605.1| YebC/PmpR family DNA-binding regulatory protein [Mesotoga prima
MesG1.Ag.4.2]
gi|387858271|gb|AFK06362.1| DNA-binding regulatory protein, YebC/PmpR family [Mesotoga prima
MesG1.Ag.4.2]
Length = 252
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +++ +FT + ++L ++ +E GG+DPNTN L S I+ + ++
Sbjct: 2 SGHNKWANIKHRKGAQDAKRSKVFTKIIRELMVSARE-GGSDPNTNTSLRSAIEKARSAN 60
Query: 88 MPMTTIENAIK 98
MP T+E AIK
Sbjct: 61 MPKDTMEKAIK 71
>gi|427796595|gb|JAA63749.1| Putative transcriptional regulator, partial [Rhipicephalus
pulchellus]
Length = 332
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCK 84
RYAGHS WQN+RHIKAAKD K ++ + +++AVK GGG+ DP N LA+ I+ K
Sbjct: 85 RYAGHSHWQNVRHIKAAKDAHKMSMTDKHMRLIEIAVKAGGGSPDPKLNRALANAIESAK 144
Query: 85 KSS-MPMTTIENAIK 98
K+ + IE AI+
Sbjct: 145 KTQVVSNANIEQAIR 159
>gi|386829381|ref|ZP_10116488.1| DNA-binding regulatory protein, YebC/PmpR family [Beggiatoa alba
B18LD]
gi|386430265|gb|EIJ44093.1| DNA-binding regulatory protein, YebC/PmpR family [Beggiatoa alba
B18LD]
Length = 248
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++A +FT +++ +A + GGG DPN N RL +D ++
Sbjct: 2 AGHSKWANIQHRKGAQDAKRAKVFTKFIREITVAARMGGG-DPNANPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIK 98
MP TIE AIK
Sbjct: 61 MPKDTIERAIK 71
>gi|383787008|ref|YP_005471577.1| YebC/PmpR family DNA-binding regulatory protein [Fervidobacterium
pennivorans DSM 9078]
gi|383109855|gb|AFG35458.1| DNA-binding regulatory protein, YebC/PmpR family
[Fervidobacterium pennivorans DSM 9078]
Length = 252
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H KAA+D +++ +FT + +++ +A +EGGG +P TN RL + ++ K+++
Sbjct: 2 SGHNKWANIKHRKAAQDAKRSKIFTKIIREIIVAAREGGG-NPETNPRLRAVLEKAKEAN 60
Query: 88 MPMTTIENAIK 98
MP TIE +IK
Sbjct: 61 MPKDTIERSIK 71
>gi|254292415|ref|YP_003058438.1| hypothetical protein Hbal_0039 [Hirschia baltica ATCC 49814]
gi|254040946|gb|ACT57741.1| protein of unknown function DUF28 [Hirschia baltica ATCC 49814]
Length = 252
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D++KA +F LSK++ +A K GG DP+ N RL I + +S
Sbjct: 2 AGHSKWANIQHRKGAQDKKKAKIFAKLSKEITIAAKMGGSGDPDMNPRLRLAIANARGAS 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP I AI V ++ Y E+
Sbjct: 62 MPKDNITRAIDKA-VGGDMEQYEEI 85
>gi|167623849|ref|YP_001674143.1| hypothetical protein Shal_1919 [Shewanella halifaxensis HAW-EB4]
gi|167353871|gb|ABZ76484.1| protein of unknown function DUF28 [Shewanella halifaxensis
HAW-EB4]
Length = 247
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT ++L +A +E GG+DP++N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKVFTKFIRELTVAARE-GGSDPDSNPRLRAAIDKSLSNN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|445062431|ref|ZP_21374822.1| hypothetical protein H263_03411 [Brachyspira hampsonii 30599]
gi|444506222|gb|ELV06593.1| hypothetical protein H263_03411 [Brachyspira hampsonii 30599]
Length = 247
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H KAA D +K +++ ++K++ +AVKEGG DP+ N RL I K ++
Sbjct: 2 SGHSKWASIKHKKAANDSKKGKIWSKIAKEITIAVKEGGSPDPDQNARLRMVIVKAKGTN 61
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP I+ AIK N+ E Y GY
Sbjct: 62 MPNDNIDRAIKRGAGAGEGANIEEMSYEGY 91
>gi|404493988|ref|YP_006718094.1| hypothetical protein Pcar_2335 [Pelobacter carbinolicus DSM 2380]
gi|119391302|sp|Q3A233.1|Y2335_PELCD RecName: Full=Probable transcriptional regulatory protein Pcar_2335
gi|77546012|gb|ABA89574.1| protein of unknown function DUF28 [Pelobacter carbinolicus DSM
2380]
Length = 248
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT L K++ +A K GGG D N RL +D K+++
Sbjct: 2 AGHSKWANIKHRKGAQDAKRGKIFTKLIKEITVAAKIGGG-DLEANARLRLAVDKAKQAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK + Y E + + P G A +V M+ R R
Sbjct: 61 MPKDNIERAIKKGTGDLDGVTYEEGTFEGYGPG----------GVAVIVEFMTDNRTRTV 110
Query: 146 PSANFISNRLGLFLECSEPITRM 168
N+ G L S + M
Sbjct: 111 ADVRHSFNKFGGSLGVSGSVAFM 133
>gi|373949609|ref|ZP_09609570.1| UPF0082 protein yeeN [Shewanella baltica OS183]
gi|386324555|ref|YP_006020672.1| hypothetical protein [Shewanella baltica BA175]
gi|333818700|gb|AEG11366.1| UPF0082 protein yeeN [Shewanella baltica BA175]
gi|373886209|gb|EHQ15101.1| UPF0082 protein yeeN [Shewanella baltica OS183]
Length = 248
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRVAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|260893481|ref|YP_003239578.1| hypothetical protein Adeg_1634 [Ammonifex degensii KC4]
gi|260865622|gb|ACX52728.1| protein of unknown function DUF28 [Ammonifex degensii KC4]
Length = 252
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ KA D E+ +FT LS+++ +AV+ GGG DP N RL + ID ++++
Sbjct: 2 AGHSKWAQIKRKKAKVDAERGKIFTKLSREIMVAVRMGGG-DPEANPRLRAAIDRAREAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
+PM I+ AI+ E Y E+
Sbjct: 61 IPMENIKRAIQKALGEETGEKYEEV 85
>gi|225620450|ref|YP_002721707.1| hypothetical protein BHWA1_01533 [Brachyspira hyodysenteriae WA1]
gi|384207809|ref|YP_005593529.1| hypothetical protein Bint_0315 [Brachyspira intermedia PWS/A]
gi|254800549|sp|C0R1L5.1|Y1533_BRAHW RecName: Full=Probable transcriptional regulatory protein
BHWA1_01533
gi|225215269|gb|ACN84003.1| conserved hypothetical protein [Brachyspira hyodysenteriae WA1]
gi|343385459|gb|AEM20949.1| conserved hypothetical protein [Brachyspira intermedia PWS/A]
Length = 247
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H KAA D +K +++ ++K++ +AVKEGG DP+ N RL I K ++
Sbjct: 2 SGHSKWASIKHKKAANDSKKGKIWSKIAKEITIAVKEGGSPDPDQNARLRMVIVKAKGTN 61
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP I+ AIK N+ E Y GY
Sbjct: 62 MPNDNIDRAIKRGAGAGEGANIEEMSYEGY 91
>gi|336311402|ref|ZP_08566366.1| hypothetical protein SOHN41_01849 [Shewanella sp. HN-41]
gi|335865205|gb|EGM70255.1| hypothetical protein SOHN41_01849 [Shewanella sp. HN-41]
Length = 248
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRVAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|296126683|ref|YP_003633935.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018499|gb|ADG71736.1| protein of unknown function DUF28 [Brachyspira murdochii DSM 12563]
Length = 247
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H KAA D +K +++ ++K++ +AVKEGG DP+ N RL I K ++
Sbjct: 2 SGHSKWASIKHKKAANDSKKGKIWSKIAKEITIAVKEGGSPDPDQNARLRMVIVKAKGTN 61
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP I+ AIK N+ E Y GY
Sbjct: 62 MPNDNIDRAIKRGAGAGEGANIEEMSYEGY 91
>gi|339481877|ref|YP_004693663.1| hypothetical protein Nit79A3_0377 [Nitrosomonas sp. Is79A3]
gi|338804022|gb|AEJ00264.1| UPF0082 protein yeeN [Nitrosomonas sp. Is79A3]
Length = 241
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L K++ +A + GGG DP++N RL +D +
Sbjct: 2 AGHSKWANIKHKKAAQDAKRGKVFTRLIKEVTVAARMGGG-DPDSNPRLRLAVDKAYDQN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP +E AIK + + Y E+ + + G+A +V M+ R
Sbjct: 61 MPKDNVERAIKRGSGTLDGADYEEIRYEGY----------GIAGAAVMVDCMTDNRVRTV 110
Query: 148 AN 149
A+
Sbjct: 111 AD 112
>gi|397906046|ref|ZP_10506871.1| FIG000859: hypothetical protein [Caloramator australicus RC3]
gi|397160806|emb|CCJ34206.1| FIG000859: hypothetical protein [Caloramator australicus RC3]
Length = 246
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D + LFT + K++++AVKE GG +P N RL I K ++
Sbjct: 2 AGHSKWANIKHRKGKQDALRGKLFTKIGKEIQVAVKE-GGPNPEANSRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MPM I+ AIK Y E+ + P G A +V A++ R
Sbjct: 61 MPMENIQRAIKRATGELKDVTYEEIIYEGYGPN----------GVAVIVQALTDNR 106
>gi|217973217|ref|YP_002357968.1| hypothetical protein Sbal223_2041 [Shewanella baltica OS223]
gi|217498352|gb|ACK46545.1| protein of unknown function DUF28 [Shewanella baltica OS223]
Length = 248
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRVAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|160875534|ref|YP_001554850.1| hypothetical protein Sbal195_2422 [Shewanella baltica OS195]
gi|378708733|ref|YP_005273627.1| hypothetical protein [Shewanella baltica OS678]
gi|418025330|ref|ZP_12664309.1| UPF0082 protein yeeN [Shewanella baltica OS625]
gi|160861056|gb|ABX49590.1| protein of unknown function DUF28 [Shewanella baltica OS195]
gi|315267722|gb|ADT94575.1| protein of unknown function DUF28 [Shewanella baltica OS678]
gi|353535314|gb|EHC04877.1| UPF0082 protein yeeN [Shewanella baltica OS625]
Length = 248
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRVAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|154249785|ref|YP_001410610.1| hypothetical protein Fnod_1106 [Fervidobacterium nodosum Rt17-B1]
gi|171769425|sp|A7HM20.1|Y1106_FERNB RecName: Full=Probable transcriptional regulatory protein
Fnod_1106
gi|154153721|gb|ABS60953.1| protein of unknown function DUF28 [Fervidobacterium nodosum
Rt17-B1]
Length = 252
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H KAA+D +++ +FT L +++ +A +EGGG +P+TN RL + ++ ++++
Sbjct: 2 SGHNKWANIKHRKAAQDAKRSKIFTKLIREIIVAAREGGG-NPDTNPRLRAVLEKAREAN 60
Query: 88 MPMTTIENAIK 98
MP T+E +IK
Sbjct: 61 MPKDTVERSIK 71
>gi|429123753|ref|ZP_19184285.1| hypothetical protein A966_05658 [Brachyspira hampsonii 30446]
gi|426280322|gb|EKV57337.1| hypothetical protein A966_05658 [Brachyspira hampsonii 30446]
Length = 247
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H KAA D +K +++ ++K++ +AVKEGG DP+ N RL I K ++
Sbjct: 2 SGHSKWASIKHKKAANDSKKGKIWSKIAKEITIAVKEGGSPDPDQNARLRMVIVKAKGTN 61
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP I+ AIK N+ E Y GY
Sbjct: 62 MPNDNIDRAIKRGAGAGEGANIEEMSYEGY 91
>gi|325981220|ref|YP_004293622.1| hypothetical protein NAL212_0515 [Nitrosomonas sp. AL212]
gi|325530739|gb|ADZ25460.1| protein of unknown function DUF28 [Nitrosomonas sp. AL212]
Length = 241
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L K++ +A + GGG DP++N RL +D +
Sbjct: 2 AGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARMGGG-DPDSNPRLRLAMDKAYGQN 60
Query: 88 MPMTTIENAIK-SCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPP 146
MP IE AIK C + + Y E+ + + G+A +V M+ R
Sbjct: 61 MPKDNIERAIKRGCGALDGV-DYEEIRYEGY----------GIAGAAVMVDCMTDNRVRT 109
Query: 147 SAN 149
A+
Sbjct: 110 VAD 112
>gi|153000826|ref|YP_001366507.1| hypothetical protein Shew185_2306 [Shewanella baltica OS185]
gi|151365444|gb|ABS08444.1| protein of unknown function DUF28 [Shewanella baltica OS185]
Length = 248
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRVAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|126174261|ref|YP_001050410.1| hypothetical protein Sbal_2039 [Shewanella baltica OS155]
gi|386341101|ref|YP_006037467.1| hypothetical protein [Shewanella baltica OS117]
gi|125997466|gb|ABN61541.1| protein of unknown function DUF28 [Shewanella baltica OS155]
gi|334863502|gb|AEH13973.1| protein of unknown function DUF28 [Shewanella baltica OS117]
Length = 248
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRVAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|149375109|ref|ZP_01892881.1| hypothetical protein MDG893_05809 [Marinobacter algicola DG893]
gi|149360473|gb|EDM48925.1| hypothetical protein MDG893_05809 [Marinobacter algicola DG893]
Length = 249
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT + ++L +A ++GGG P+ N RL ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKIIRELTVAARQGGGN-PDDNPRLRGVIDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
M TIE A++ + Y EL+ + P
Sbjct: 61 MKKDTIERAVERGAGDGDDSNYEELTYEGYGP 92
>gi|78187497|ref|YP_375540.1| hypothetical protein Plut_1643 [Chlorobium luteolum DSM 273]
gi|119391278|sp|Q3B2D4.1|Y1643_PELLD RecName: Full=Probable transcriptional regulatory protein
Plut_1643
gi|78167399|gb|ABB24497.1| Protein of unknown function DUF28 [Chlorobium luteolum DSM 273]
Length = 250
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KA DQ++ +LFT L K++ +A K GGG DP+ N RL ID + +S
Sbjct: 2 SGHSKWATIKRKKAVTDQKRGSLFTKLVKEITIAAKMGGG-DPSGNPRLRLAIDTARSNS 60
Query: 88 MPMTTIENAIK 98
MPM I+ A+K
Sbjct: 61 MPMDNIQRAVK 71
>gi|300870812|ref|YP_003785683.1| hypothetical protein BP951000_1193 [Brachyspira pilosicoli 95/1000]
gi|404477299|ref|YP_006708730.1| glucose-1-phosphate adenylyltransferase [Brachyspira pilosicoli
B2904]
gi|431808372|ref|YP_007235270.1| hypothetical protein BPP43_09150 [Brachyspira pilosicoli P43/6/78]
gi|434383385|ref|YP_006705168.1| hypothetical protein WESB_2618 [Brachyspira pilosicoli WesB]
gi|300688511|gb|ADK31182.1| conserved hypothetical protein [Brachyspira pilosicoli 95/1000]
gi|404432034|emb|CCG58080.1| hypothetical protein WESB_2618 [Brachyspira pilosicoli WesB]
gi|404438788|gb|AFR71982.1| glucose-1-phosphate adenylyltransferase [Brachyspira pilosicoli
B2904]
gi|430781731|gb|AGA67015.1| hypothetical protein BPP43_09150 [Brachyspira pilosicoli P43/6/78]
Length = 248
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H KAA D +K +++ ++K++ +AVKEGG DP+ N RL I K ++
Sbjct: 2 SGHSKWASIKHKKAANDSKKGKIWSKIAKEITIAVKEGGSPDPDQNARLRMVIVKAKGTN 61
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP I+ AIK N+ E Y GY
Sbjct: 62 MPNDNIDRAIKRGAGAGEGANIEEMSYEGY 91
>gi|153853240|ref|ZP_01994649.1| hypothetical protein DORLON_00634 [Dorea longicatena DSM 13814]
gi|149754026|gb|EDM63957.1| DNA-binding regulatory protein, YebC/PmpR family [Dorea longicatena
DSM 13814]
Length = 243
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + K++ +AVKEGG +DP+ N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKIGKEIAVAVKEGGSSDPSNNSRLRDVIAKAKSNN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK + + Y ++ + P G+A +V ++ + +
Sbjct: 62 MPNDTIERNIKRASGDMSAANYEHITYEGYGPN----------GTAIIVETLTDNKNRTA 111
Query: 148 AN 149
+N
Sbjct: 112 SN 113
>gi|283796372|ref|ZP_06345525.1| glucose-1-phosphate adenylyltransferase [Clostridium sp. M62/1]
gi|291075780|gb|EFE13144.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium sp.
M62/1]
gi|295091465|emb|CBK77572.1| conserved hypothetical protein TIGR01033 [Clostridium cf.
saccharolyticum K10]
Length = 242
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGADPANNSRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK N Y EL+ + P G A +V+A++ + +
Sbjct: 61 MPNDTIERGIKKAAGDANSVNYEELTYEGYGPN----------GVAIIVTALTDNKNRTA 110
Query: 148 ANFIS 152
AN S
Sbjct: 111 ANVRS 115
>gi|146293034|ref|YP_001183458.1| hypothetical protein Sputcn32_1936 [Shewanella putrefaciens
CN-32]
gi|386313811|ref|YP_006009976.1| hypothetical protein [Shewanella putrefaciens 200]
gi|145564724|gb|ABP75659.1| protein of unknown function DUF28 [Shewanella putrefaciens CN-32]
gi|319426436|gb|ADV54510.1| protein of unknown function DUF28 [Shewanella putrefaciens 200]
Length = 248
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRIAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|145220236|ref|YP_001130945.1| hypothetical protein Cvib_1432 [Chlorobium phaeovibrioides DSM 265]
gi|189038695|sp|A4SG34.1|Y1432_PROVI RecName: Full=Probable transcriptional regulatory protein Cvib_1432
gi|145206400|gb|ABP37443.1| protein of unknown function DUF28 [Chlorobium phaeovibrioides DSM
265]
Length = 250
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K+A DQ++ LFT L K++ +A K GGG DP N RL ID + +S
Sbjct: 2 SGHSKWATIKRKKSATDQKRGNLFTKLVKEITIAAKMGGG-DPAGNPRLRLAIDTARSNS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MPM I+ AIK Y E++ + P
Sbjct: 61 MPMDNIQRAIKKGTGELEGVSYDEITYEGYGP 92
>gi|309790185|ref|ZP_07684757.1| hypothetical protein OSCT_0708 [Oscillochloris trichoides DG-6]
gi|308227770|gb|EFO81426.1| hypothetical protein OSCT_0708 [Oscillochloris trichoides DG6]
Length = 251
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW IR K DQ + LFT L++ + +A +EGG DP+ N+RL ID + ++
Sbjct: 2 SGHSKWHTIRRAKGVTDQRRGQLFTKLARDITIAAREGGSADPDLNFRLRLAIDKARANN 61
Query: 88 MPMTTIENA 96
MP I+ A
Sbjct: 62 MPNENIQRA 70
>gi|120598880|ref|YP_963454.1| hypothetical protein Sputw3181_2072 [Shewanella sp. W3-18-1]
gi|120558973|gb|ABM24900.1| protein of unknown function DUF28 [Shewanella sp. W3-18-1]
Length = 248
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDPDSNPRLRIAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|85712316|ref|ZP_01043367.1| Uncharacterized conserved enzyme [Idiomarina baltica OS145]
gi|85693943|gb|EAQ31890.1| Uncharacterized conserved enzyme [Idiomarina baltica OS145]
Length = 249
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L +++ ++ ++GGG DP TN RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIREITVSARQGGG-DPETNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI+ A+K
Sbjct: 61 MKRDTIDTAVK 71
>gi|383788744|ref|YP_005473313.1| hypothetical protein CSE_10840 [Caldisericum exile AZM16c01]
gi|381364381|dbj|BAL81210.1| hypothetical protein CSE_10840 [Caldisericum exile AZM16c01]
Length = 254
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K+A+D ++ LFT L+K+L +A + GGG +P TN RL + ID K+
Sbjct: 2 SGHSKWHNIQARKSAQDAKRGKLFTKLTKELIIAARAGGG-NPETNARLRNAIDKAKRLG 60
Query: 88 MPMTTIENAI 97
MPM I+ AI
Sbjct: 61 MPMDNIKKAI 70
>gi|344338368|ref|ZP_08769300.1| UPF0082 protein yeeN [Thiocapsa marina 5811]
gi|343801650|gb|EGV19592.1| UPF0082 protein yeeN [Thiocapsa marina 5811]
Length = 249
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D+++ ++T L +++ +A +EGGG DP N RL +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDKQRGKVWTKLIREVTVASREGGG-DPGANPRLRLAMDKAFGAN 60
Query: 88 MPMTTIENAIK 98
MP T+E AIK
Sbjct: 61 MPRDTVERAIK 71
>gi|390354364|ref|XP_785248.3| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Strongylocentrotus purpuratus]
Length = 414
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 27 YAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKS 86
YAGH+KW +++IK KD EK+ FT + +LKLAVKE G +P TN LA+ I K
Sbjct: 123 YAGHNKWSKVKYIKGPKDLEKSKAFTRIGIQLKLAVKE-RGPNPETNSSLAALISLAKSK 181
Query: 87 SMPMTTIENAIK 98
SMP TI++ IK
Sbjct: 182 SMPKATIDSMIK 193
>gi|365841211|ref|ZP_09382300.1| DNA-binding regulatory protein, YebC/PmpR family [Flavonifractor
plautii ATCC 29863]
gi|373115287|ref|ZP_09529463.1| YebC/PmpR family DNA-binding regulatory protein [Lachnospiraceae
bacterium 7_1_58FAA]
gi|364578143|gb|EHM55370.1| DNA-binding regulatory protein, YebC/PmpR family [Flavonifractor
plautii ATCC 29863]
gi|371670579|gb|EHO35658.1| YebC/PmpR family DNA-binding regulatory protein [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 242
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A D +++ +FT +++++ +AVK GG DPN N RLA+ I K ++
Sbjct: 2 SGHSKWHNIQKTKGAADAKRSQIFTKIAREMIVAVKTGGSGDPNNNSRLATVIAKAKAAN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP I+ I N Y + + P+ G A +V A++ R R
Sbjct: 62 MPNDNIKRTIDKALGSGNADSYENVVYEGYGPS----------GVAVIVDALTDNRNRTA 111
Query: 146 PSANFISNRLG 156
P + ++ G
Sbjct: 112 PEVRHLLDKYG 122
>gi|375088507|ref|ZP_09734845.1| YebC/PmpR family DNA-binding regulatory protein [Dolosigranulum
pigrum ATCC 51524]
gi|374561472|gb|EHR32811.1| YebC/PmpR family DNA-binding regulatory protein [Dolosigranulum
pigrum ATCC 51524]
Length = 240
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K A+D+++A F +K + A KE GG DP+TN L ID + +
Sbjct: 2 AGHSKWNNIKQRKGAQDKKRAKQFQKFTKHIYKAAKE-GGDDPDTNPALRLAIDKARDGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP IE AIK P Y E++ + P
Sbjct: 61 MPNDNIERAIKRATDPNEGANYNEVTYEGYGP 92
>gi|153816435|ref|ZP_01969103.1| hypothetical protein RUMTOR_02688 [Ruminococcus torques ATCC 27756]
gi|317500188|ref|ZP_07958420.1| hypothetical protein HMPREF1026_00362 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087584|ref|ZP_08336514.1| hypothetical protein HMPREF1025_00097 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438006|ref|ZP_08617649.1| hypothetical protein HMPREF0990_00043 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145846223|gb|EDK23141.1| DNA-binding regulatory protein, YebC/PmpR family [Ruminococcus
torques ATCC 27756]
gi|316898403|gb|EFV20442.1| hypothetical protein HMPREF1026_00362 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330400455|gb|EGG80088.1| hypothetical protein HMPREF1025_00097 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336018381|gb|EGN48129.1| hypothetical protein HMPREF0990_00043 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 243
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKEGGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKIGRELAVAVKEGGGPDPANNSRLRDVIAKAKSNN 61
Query: 88 MPMTTIENAIKSC 100
MP TIE IK
Sbjct: 62 MPNDTIERNIKKA 74
>gi|30248234|ref|NP_840304.1| hypothetical protein NE0210 [Nitrosomonas europaea ATCC 19718]
gi|33516990|sp|Q82XP6.1|Y210_NITEU RecName: Full=Probable transcriptional regulatory protein NE0210
gi|30180119|emb|CAD84121.1| Domain of unknown function DUF28 [Nitrosomonas europaea ATCC 19718]
Length = 241
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 13/117 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L K++ +A + GGG DPN+N RL +D +
Sbjct: 2 AGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGG-DPNSNPRLRLAMDKAFGHN 60
Query: 88 MPMTTIENAIK-SCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP +E AIK C E + Y E+ + + G+A +V M+ R
Sbjct: 61 MPKDNVERAIKRGCGELEGV-NYEEIRYEGY----------GISGAAVMVDCMTDNR 106
>gi|350270598|ref|YP_004881906.1| hypothetical protein OBV_22020 [Oscillibacter valericigenes
Sjm18-20]
gi|348595440|dbj|BAK99400.1| hypothetical protein OBV_22020 [Oscillibacter valericigenes
Sjm18-20]
Length = 245
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCKKS 86
+GHSKW NI+ K A D +++ FT ++K++ +AVKEGGG+ DPN N RLA+ I K
Sbjct: 2 SGHSKWHNIQKTKGAADAKRSAAFTKVAKEIIVAVKEGGGSGDPNNNSRLATVIAKAKAV 61
Query: 87 SMPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRF 144
+MP I+ I N + ++ + P G A +V A++ R R
Sbjct: 62 NMPNENIKRTIDKAQGAGNTESFESITYEGYGPG----------GVAVIVDALTDNRQRT 111
Query: 145 PPS 147
P
Sbjct: 112 APE 114
>gi|334132319|ref|ZP_08506077.1| hypothetical protein METUNv1_03159 [Methyloversatilis universalis
FAM5]
gi|333442629|gb|EGK70598.1| hypothetical protein METUNv1_03159 [Methyloversatilis universalis
FAM5]
Length = 243
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ F+ L+K++ +A K GGG DP N RL ID K +
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGAAFSKLAKEITVAAKMGGG-DPGFNPRLRMAIDKAKAVN 60
Query: 88 MPMTTIENAIK 98
MP I+NAIK
Sbjct: 61 MPKDKIDNAIK 71
>gi|336434909|ref|ZP_08614628.1| hypothetical protein HMPREF0988_00213 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336002317|gb|EGN32428.1| hypothetical protein HMPREF0988_00213 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 244
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKEGGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKIGRELAVAVKEGGGPDPANNSRLRDVIAKAKSNN 61
Query: 88 MPMTTIENAIKSC 100
MP TIE IK
Sbjct: 62 MPNDTIERNIKKA 74
>gi|190702562|gb|ACE75446.1| conserved hypothetical protein [Glyptapanteles indiensis]
Length = 273
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 1 MYLLGRPLGVYKVHRLIPDEGYLLVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKL 60
MY R V LI + R GH+KWQNI H KA KD EK+TL S+++K+
Sbjct: 1 MYSFTRLYVQRTVRELIRQDK----RSKGHAKWQNIAHTKAMKDAEKSTLTLAFSRRIKV 56
Query: 61 AVKEG-GGTDPNTNYRLASTIDYCKKSSMPMTTIENAIK 98
AV EG T P+ N +LAS ++ KK ++P+ T+ I+
Sbjct: 57 AVAEGNNNTKPSENLKLASILEEAKKKNIPIATLNGVIE 95
>gi|296122800|ref|YP_003630578.1| hypothetical protein Plim_2554 [Planctomyces limnophilus DSM
3776]
gi|296015140|gb|ADG68379.1| protein of unknown function DUF28 [Planctomyces limnophilus DSM
3776]
Length = 248
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS W NI H K DQ++ LF LSK + +A + GG DP N L ID KKSS
Sbjct: 2 AGHSHWANIAHKKGRYDQKRGKLFGKLSKAIIVAAQRGG--DPAANLALRYAIDRAKKSS 59
Query: 88 MPMTTIENAIK 98
MP TIE AIK
Sbjct: 60 MPADTIERAIK 70
>gi|189346018|ref|YP_001942547.1| hypothetical protein Clim_0475 [Chlorobium limicola DSM 245]
gi|226707596|sp|B3EG35.1|Y475_CHLL2 RecName: Full=Probable transcriptional regulatory protein Clim_0475
gi|189340165|gb|ACD89568.1| protein of unknown function DUF28 [Chlorobium limicola DSM 245]
Length = 250
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ LFT L K++ ++ K GGG DP+ N RL +D + +S
Sbjct: 2 SGHSKWATIKRKKAATDQKRGNLFTKLVKEITISAKMGGG-DPSGNPRLRLAVDTARANS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MPM I+ AIK + Y E++ + P
Sbjct: 61 MPMDNIQRAIKKGTGELDGATYDEITYEGYGP 92
>gi|336323918|ref|YP_004603885.1| hypothetical protein Flexsi_1670 [Flexistipes sinusarabici DSM
4947]
gi|336107499|gb|AEI15317.1| UPF0082 protein yeeN [Flexistipes sinusarabici DSM 4947]
Length = 247
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D +K +FT ++K++ +A K GGG DP N RL +D K +
Sbjct: 2 AGHSKWANIKHRKAAQDAKKGKVFTKVAKEITVAAKLGGG-DPEMNPRLRMALDKAKAVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P ++ AIK N + ++ + P EG A LV A++
Sbjct: 61 LPKDNVDRAIKKGTGEGNEANFEDVMYEGYGP----------EGVAILVQALT 103
>gi|262037457|ref|ZP_06010917.1| conserved hypothetical protein TIGR01033 [Leptotrichia goodfellowii
F0264]
gi|261748492|gb|EEY35871.1| conserved hypothetical protein TIGR01033 [Leptotrichia goodfellowii
F0264]
Length = 249
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 16/143 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCKKS 86
AGHSKW NI+H K +D+++ FT L K+L +A + GGG D N RLA ID K +
Sbjct: 2 AGHSKWANIQHRKGRQDKQRGKAFTRLGKELMIAARIGGGNVDFNPRLRLA--IDKAKAA 59
Query: 87 SMPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPP 146
+MP TIE AIK Y+E+ + P IA LV + SA S VR
Sbjct: 60 NMPKDTIERAIKKGTGELEGVDYIEIRYEGYGPG-GIAFLVDVVTDNKNRSA-STVRMNF 117
Query: 147 SAN-----------FISNRLGLF 158
S N F+ +R G+F
Sbjct: 118 SRNDGNLGETGSVAFMFDRKGIF 140
>gi|220932072|ref|YP_002508980.1| hypothetical protein Hore_12350 [Halothermothrix orenii H 168]
gi|259645757|sp|B8CXG6.1|Y1235_HALOH RecName: Full=Probable transcriptional regulatory protein
Hore_12350
gi|219993382|gb|ACL69985.1| conserved hypothetical protein TIGR01033 [Halothermothrix orenii
H 168]
Length = 253
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D+++ LF+ LSK + +A +EGGG DP N L I K ++
Sbjct: 2 AGHSKWANIKHKKAKEDRKRGKLFSKLSKMITVAAREGGG-DPEMNPDLRLAIQKAKDNN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPNDNIERAIK 71
>gi|409196681|ref|ZP_11225344.1| hypothetical protein MsalJ2_06567 [Marinilabilia salmonicolor JCM
21150]
Length = 250
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++A +FT ++K++++AVKE GG DP TN RL + + +
Sbjct: 2 AGHSKWANIKHRKGAQDAKRAKMFTRITKEIQVAVKE-GGADPETNPRLRLAVQNGRSVN 60
Query: 88 MPMTTIENAI 97
MP I AI
Sbjct: 61 MPKDNINRAI 70
>gi|260837159|ref|XP_002613573.1| hypothetical protein BRAFLDRAFT_277373 [Branchiostoma floridae]
gi|229298958|gb|EEN69582.1| hypothetical protein BRAFLDRAFT_277373 [Branchiostoma floridae]
Length = 297
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
++AGH+KW +RHIK KDQ K+ LF + ++++AVKE G +P+ N +L S I K
Sbjct: 61 QFAGHNKWSKVRHIKGPKDQAKSMLFAKYALQIRVAVKE-DGPNPDLNSKLDSIISIAKD 119
Query: 86 SSMPMTTIENAIKSCNVP 103
M +IE+A+K+ + P
Sbjct: 120 KGMTKASIEHAVKTADKP 137
>gi|148284133|ref|YP_001248223.1| hypothetical protein OTBS_0251 [Orientia tsutsugamushi str.
Boryong]
gi|166228393|sp|A5CCC2.1|Y251_ORITB RecName: Full=Probable transcriptional regulatory protein OTBS_0251
gi|146739572|emb|CAM79317.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
Length = 249
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D++KA LF +L +++ L+ K GTD N+RL + I K ++
Sbjct: 2 AGHSKFKNIQHRKGAQDKKKAKLFASLIREISLSAK--SGTDIQYNHRLRAAISAAKFNN 59
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P IE AI N +N Y E++ + +G A +V A++
Sbjct: 60 LPKDRIEKAIAQANNKDNYENYFEITY----------EGIIFDGIAIIVEALT 102
>gi|163846620|ref|YP_001634664.1| hypothetical protein Caur_1043 [Chloroflexus aurantiacus J-10-fl]
gi|222524417|ref|YP_002568888.1| hypothetical protein Chy400_1141 [Chloroflexus sp. Y-400-fl]
gi|189038551|sp|A9WIH5.1|Y1043_CHLAA RecName: Full=Probable transcriptional regulatory protein
Caur_1043
gi|254799951|sp|B9LAL6.1|Y1141_CHLSY RecName: Full=Probable transcriptional regulatory protein
Chy400_1141
gi|163667909|gb|ABY34275.1| protein of unknown function DUF28 [Chloroflexus aurantiacus
J-10-fl]
gi|222448296|gb|ACM52562.1| protein of unknown function DUF28 [Chloroflexus sp. Y-400-fl]
Length = 252
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW IR K DQ + LFT L++ + +A +EGG DP+ N+RL I+ + ++
Sbjct: 2 SGHSKWHTIRRTKGVNDQRRGQLFTKLARDITIATREGGSGDPDLNFRLRLAIEKARANN 61
Query: 88 MPMTTIENAIK 98
MP I+ AI
Sbjct: 62 MPNENIQRAID 72
>gi|222055419|ref|YP_002537781.1| hypothetical protein Geob_2326 [Geobacter daltonii FRC-32]
gi|254801298|sp|B9LZC7.1|Y2326_GEOSF RecName: Full=Probable transcriptional regulatory protein Geob_2326
gi|221564708|gb|ACM20680.1| protein of unknown function DUF28 [Geobacter daltonii FRC-32]
Length = 247
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ +FT L K++ +A K GGG DP+ N RL + ID K +
Sbjct: 2 SGHNKWSTIKHKKGAADAKRGKIFTKLIKEITVAAKLGGG-DPDGNPRLRTAIDKAKGEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E + + P G+A LV M+ R
Sbjct: 61 MPKDNIERAIKKGTGGMDGVVYEETTYEGYGPG----------GAAVLVEVMTDNR---- 106
Query: 148 ANFISNRLGLFLECS 162
+S+ +F +C+
Sbjct: 107 NRTVSDVRSIFTKCN 121
>gi|294141124|ref|YP_003557102.1| hypothetical protein SVI_2353 [Shewanella violacea DSS12]
gi|293327593|dbj|BAJ02324.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 248
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+D ++N RL + ID ++
Sbjct: 2 AGHSKWDNIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDADSNPRLRAAIDKSLSNN 60
Query: 88 MPMTTIENAIK 98
M TIE A+K
Sbjct: 61 MTRDTIERAVK 71
>gi|325661287|ref|ZP_08149914.1| hypothetical protein HMPREF0490_00647 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472794|gb|EGC76005.1| hypothetical protein HMPREF0490_00647 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 214
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKEGGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKIGRELAVAVKEGGGPDPANNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ +IK + Y ++ + P G+A +V A++ + +
Sbjct: 62 MPNDNIDRSIKKAAGEGSADNYEHITYEGYGPN----------GTAIIVKALTDNKNRTA 111
Query: 148 AN 149
+N
Sbjct: 112 SN 113
>gi|291286411|ref|YP_003503227.1| hypothetical protein Dacet_0473 [Denitrovibrio acetiphilus DSM
12809]
gi|290883571|gb|ADD67271.1| protein of unknown function DUF28 [Denitrovibrio acetiphilus DSM
12809]
Length = 249
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D +K FT ++K+L +A K GG DP N RL +D K ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKKGKAFTKVAKELTVAAK-IGGADPEMNPRLRVALDKAKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSR 141
+P +E AIK N Y ++ + P G A LV A++
Sbjct: 61 LPKDNVERAIKKGTGEGNDAVYEDMVYEGYGPG----------GVAILVKALTE 104
>gi|119774977|ref|YP_927717.1| hypothetical protein Sama_1842 [Shewanella amazonensis SB2B]
gi|119767477|gb|ABM00048.1| protein of unknown function DUF28 [Shewanella amazonensis SB2B]
Length = 248
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ LFT L ++L ++ +E GG+D + N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKLFTKLIRELVVSARE-GGSDADANPRLRAAIDKALSAN 60
Query: 88 MPMTTIENAIK 98
M T+E A+K
Sbjct: 61 MTRDTVERAVK 71
>gi|354558078|ref|ZP_08977334.1| UPF0082 protein yeeN [Desulfitobacterium metallireducens DSM 15288]
gi|353548803|gb|EHC18247.1| UPF0082 protein yeeN [Desulfitobacterium metallireducens DSM 15288]
Length = 252
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KA D +K +FT L ++L +A + GGG +P N+RL ID K ++
Sbjct: 2 SGHSKWANIKHKKAKTDAQKGKVFTKLGRELIVAARAGGG-EPENNFRLKIAIDNAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ AI+ + Y EL + P
Sbjct: 61 MPNDNIKRAIQKGAGGVDGVAYEELRYEGYGP 92
>gi|269122135|ref|YP_003310312.1| hypothetical protein Sterm_3547 [Sebaldella termitidis ATCC 33386]
gi|268616013|gb|ACZ10381.1| protein of unknown function DUF28 [Sebaldella termitidis ATCC
33386]
Length = 250
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++A +FT + K+L +A K GGG D N RL +D K ++
Sbjct: 2 AGHSKWANIKHRKGRQDAQRAKVFTRIGKELTIAAKLGGG-DIGFNPRLRLAVDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS-RVRFP- 145
MP +E AIK Y E+ + P +A LV + SA + R+ F
Sbjct: 61 MPKDNMERAIKKGTGELEGVDYQEIRYEGYGPG-GVAFLVDVVTDNKNRSASTVRMNFSR 119
Query: 146 --------PSANFISNRLGLFLECSEPITRMKQASVLLATAL 179
S +F+ +R G+F + I VL+ TAL
Sbjct: 120 NDGNLGETGSVSFLFDRKGIFEFKKDGIDE----DVLMETAL 157
>gi|358447635|ref|ZP_09158152.1| hypothetical protein KYE_00115 [Marinobacter manganoxydans MnI7-9]
gi|357228138|gb|EHJ06586.1| hypothetical protein KYE_00115 [Marinobacter manganoxydans MnI7-9]
Length = 247
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT + ++L +A ++GGG +P+ N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKIIRELTVAARQGGG-NPDDNPRLRAVIDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
M TIE A++ + Y EL+ + P
Sbjct: 61 MKKDTIERAVERGAGGGDDDNYEELTYEGYGP 92
>gi|113970237|ref|YP_734030.1| hypothetical protein Shewmr4_1899 [Shewanella sp. MR-4]
gi|114047574|ref|YP_738124.1| hypothetical protein Shewmr7_2079 [Shewanella sp. MR-7]
gi|117920399|ref|YP_869591.1| hypothetical protein Shewana3_1954 [Shewanella sp. ANA-3]
gi|113884921|gb|ABI38973.1| protein of unknown function DUF28 [Shewanella sp. MR-4]
gi|113889016|gb|ABI43067.1| protein of unknown function DUF28 [Shewanella sp. MR-7]
gi|117612731|gb|ABK48185.1| protein of unknown function DUF28 [Shewanella sp. ANA-3]
Length = 248
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L ++ +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSARE-GGSDPDSNPRLRIAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M TIE AIK
Sbjct: 61 MTRDTIERAIK 71
>gi|320160777|ref|YP_004174001.1| hypothetical protein ANT_13730 [Anaerolinea thermophila UNI-1]
gi|319994630|dbj|BAJ63401.1| hypothetical protein ANT_13730 [Anaerolinea thermophila UNI-1]
Length = 252
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ LFT L++++ +A +EGGG DP TN+RL ++ + +
Sbjct: 2 SGHSKWATIKRKKGAMDAKRGQLFTRLTREIVMAAREGGG-DPETNFRLRLAVEKARSQN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKENIERAIK 71
>gi|351704439|gb|EHB07358.1| Translational activator of cytochrome c oxidase 1 [Heterocephalus
glaber]
Length = 293
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW +RHIK KD E++ +F L ++LAVKE GG +P N L+ ++ C+
Sbjct: 55 AGHNKWSKVRHIKGPKDAERSRIFNKLCLSIRLAVKE-GGPNPELNSNLSHILEVCRSKH 113
Query: 88 MPMTTIENAIK 98
MP +TIE A+K
Sbjct: 114 MPKSTIEAALK 124
>gi|24373979|ref|NP_718022.1| DNA-binding regulatory protein YebC [Shewanella oneidensis MR-1]
gi|33517027|sp|Q8EEF0.1|Y2432_SHEON RecName: Full=Probable transcriptional regulatory protein SO_2432
gi|24348430|gb|AAN55466.1| DNA-binding regulatory protein YebC [Shewanella oneidensis MR-1]
Length = 248
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L ++ +E GG+DP++N RL ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSARE-GGSDPDSNPRLRIAIDKALGGN 60
Query: 88 MPMTTIENAIK 98
M TIE AIK
Sbjct: 61 MTRDTIERAIK 71
>gi|339061779|ref|ZP_08648998.1| hypothetical protein imdm_2182 [gamma proteobacterium IMCC2047]
gi|330720193|gb|EGG98578.1| hypothetical protein imdm_2182 [gamma proteobacterium IMCC2047]
Length = 244
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT ++L +A + GGG DP N RL +D K ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTRFIRELTVAARAGGG-DPEDNPRLRLAVDRAKSAN 60
Query: 88 MPMTTIENAIK 98
MP T++ AI
Sbjct: 61 MPKDTMQRAID 71
>gi|39996176|ref|NP_952127.1| hypothetical protein GSU1074 [Geobacter sulfurreducens PCA]
gi|409911617|ref|YP_006890082.1| hypothetical protein KN400_1052 [Geobacter sulfurreducens KN400]
gi|49036508|sp|P62036.1|Y1074_GEOSL RecName: Full=Probable transcriptional regulatory protein GSU1074
gi|39982941|gb|AAR34400.1| protein of unknown function DUF28 [Geobacter sulfurreducens PCA]
gi|298505190|gb|ADI83913.1| protein of unknown function DUF28 [Geobacter sulfurreducens
KN400]
Length = 247
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW IRH K A D ++ +FT L K++ +A K GGG DPN N RL + +D K +
Sbjct: 2 SGHNKWSTIRHKKGAADAKRGKVFTKLIKEITVAAKIGGG-DPNGNPRLRAAVDKAKAEN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|302389941|ref|YP_003825762.1| hypothetical protein Toce_1384 [Thermosediminibacter oceani DSM
16646]
gi|302200569|gb|ADL08139.1| protein of unknown function DUF28 [Thermosediminibacter oceani DSM
16646]
Length = 242
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KA D +K L+T LSK + +AV+E GG DPN N +L I+ ++++
Sbjct: 2 SGHSKWANIKHKKAKMDAQKGKLYTKLSKMIIVAVRE-GGPDPNANSKLRDIIEKAREAN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP I AIK N+ E +Y GY
Sbjct: 61 MPNENIMRAIKRGSGELGGANMEEVLYEGY 90
>gi|406913501|gb|EKD52885.1| hypothetical protein ACD_61C00209G0011 [uncultured bacterium]
Length = 174
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H KA +D +++++FT ++KK+ +AVK+GG D N N L + +D + +
Sbjct: 2 SGHSKWSTIKHQKAIEDNKRSSVFTKIAKKIHIAVKKGGSGDINANPYLRACVDEARSVN 61
Query: 88 MPMTTIENAI 97
MPM I+ AI
Sbjct: 62 MPMDNIKRAI 71
>gi|154502761|ref|ZP_02039821.1| hypothetical protein RUMGNA_00575 [Ruminococcus gnavus ATCC 29149]
gi|336431131|ref|ZP_08610985.1| hypothetical protein HMPREF0991_00104 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796644|gb|EDN79064.1| DNA-binding regulatory protein, YebC/PmpR family [Ruminococcus
gnavus ATCC 29149]
gi|336020053|gb|EGN49770.1| hypothetical protein HMPREF0991_00104 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 243
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT L ++L +AVKEGGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKLGRELAVAVKEGGGPDPANNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSC 100
MP TI+ IK
Sbjct: 62 MPNDTIDRNIKKA 74
>gi|110833611|ref|YP_692470.1| hypothetical protein ABO_0750 [Alcanivorax borkumensis SK2]
gi|118574398|sp|Q0VRK0.1|Y750_ALCBS RecName: Full=Probable transcriptional regulatory protein
ABO_0750
gi|110646722|emb|CAL16198.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 247
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L +A K GGG +PN N RL + ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKMGGG-EPNDNPRLRAAIDKALGQN 60
Query: 88 MPMTTIENAIK 98
M TI+ A+K
Sbjct: 61 MTRDTIDRAVK 71
>gi|363755436|ref|XP_003647933.1| hypothetical protein Ecym_7274 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891969|gb|AET41116.1| hypothetical protein Ecym_7274 [Eremothecium cymbalariae
DBVPG#7215]
Length = 282
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 24 LVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYC 83
+V +GHSKW I+H KA D K LF + ++ +AVK GG DP N RLA+ I+
Sbjct: 24 VVAKSGHSKWSTIKHDKAKNDSLKNNLFNKYANRIAVAVKVGGSADPRINIRLATAIEEA 83
Query: 84 KKSSMPMTTIENAIK 98
K+++ IENAIK
Sbjct: 84 NKANVTKKVIENAIK 98
>gi|210612602|ref|ZP_03289393.1| hypothetical protein CLONEX_01595 [Clostridium nexile DSM 1787]
gi|210151527|gb|EEA82534.1| hypothetical protein CLONEX_01595 [Clostridium nexile DSM 1787]
Length = 243
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D + +FT + ++L +AVKEGGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAVRGKIFTKIGRELAVAVKEGGGPDPANNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE +IK + Y ++ + P G+A +V A++ + +
Sbjct: 62 MPNDNIERSIKKAAGDADASNYEHVTYEGYGPN----------GTAIIVDALTDNKNRTA 111
Query: 148 AN 149
+N
Sbjct: 112 SN 113
>gi|379007122|ref|YP_005256573.1| hypothetical protein [Sulfobacillus acidophilus DSM 10332]
gi|361053384|gb|AEW04901.1| UPF0082 protein yeeN [Sulfobacillus acidophilus DSM 10332]
Length = 247
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ KA D +K TLF+ L+K++ A K GGG +P+TN++L I+ K ++
Sbjct: 2 SGHSKWANIKRKKAKVDAQKGTLFSRLTKEIMAAAKRGGG-NPDTNFKLRIAIEKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLE 111
+P IE AI+ E Y E
Sbjct: 61 LPAANIERAIRRATGQEAGVHYEE 84
>gi|311069266|ref|YP_003974189.1| hypothetical protein BATR1942_11635 [Bacillus atrophaeus 1942]
gi|419820083|ref|ZP_14343697.1| hypothetical protein UY9_01691 [Bacillus atrophaeus C89]
gi|310869783|gb|ADP33258.1| hypothetical protein BATR1942_11635 [Bacillus atrophaeus 1942]
gi|388475733|gb|EIM12442.1| hypothetical protein UY9_01691 [Bacillus atrophaeus C89]
Length = 245
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K+L +A K+ GGTDP +N L ID K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDSKRGKIFMKLAKELYVAAKQ-GGTDPESNANLRLVIDKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRV 142
MP I+ AIK + Y +++ + P+ IA +V+ CL +R
Sbjct: 61 MPNDNIDRAIKKAAGNHDGNNYEDITYEGYGPS-GIAVMVT-----CLTDNKNRT 109
>gi|157375168|ref|YP_001473768.1| hypothetical protein Ssed_2031 [Shewanella sediminis HAW-EB3]
gi|157317542|gb|ABV36640.1| protein of unknown function DUF28 [Shewanella sediminis HAW-EB3]
Length = 248
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+D ++N RL + ID ++
Sbjct: 2 AGHSKWDNIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDVDSNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|254428271|ref|ZP_05041978.1| conserved hypothetical protein TIGR01033 [Alcanivorax sp. DG881]
gi|196194440|gb|EDX89399.1| conserved hypothetical protein TIGR01033 [Alcanivorax sp. DG881]
Length = 248
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L +A K GGG +PN N RL + ID +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKMGGG-EPNDNPRLRAAIDKALGQN 60
Query: 88 MPMTTIENAIK 98
M TI+ A+K
Sbjct: 61 MTRDTIDRAVK 71
>gi|339499958|ref|YP_004697993.1| hypothetical protein Spica_1339 [Spirochaeta caldaria DSM 7334]
gi|338834307|gb|AEJ19485.1| UPF0082 protein yeeN [Spirochaeta caldaria DSM 7334]
Length = 246
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT L K++ +A + GGG DP+ N RL + I K ++
Sbjct: 2 SGHSKWATIKHKKGAADAKRGQMFTKLIKEISIAARMGGG-DPDANPRLRTAILKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP +E AIK Y EL+ + P G A L+ ++ + +
Sbjct: 61 MPKDNVERAIKKGTGELEGVNYEELTYEAYAPG----------GVAVLIEVLTDNKNRAA 110
Query: 148 ANF--ISNRLGLFLECSEPITRM 168
A+ I N+ G L + ++R+
Sbjct: 111 ADVRNILNKAGGSLATAGAVSRL 133
>gi|52081262|ref|YP_080053.1| hypothetical protein BL01150 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644772|ref|ZP_07999005.1| hypothetical protein HMPREF1012_00038 [Bacillus sp. BT1B_CT2]
gi|404490141|ref|YP_006714247.1| hypothetical protein BLi02909 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683242|ref|ZP_17658081.1| hypothetical protein MUY_03095 [Bacillus licheniformis WX-02]
gi|67462036|sp|Q65GN7.1|Y2909_BACLD RecName: Full=Probable transcriptional regulatory protein
BLi02909/BL01150
gi|52004473|gb|AAU24415.1| conserved protein YrbC [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52349143|gb|AAU41777.1| DNA-binding regulatory protein YrbC [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|317392581|gb|EFV73375.1| hypothetical protein HMPREF1012_00038 [Bacillus sp. BT1B_CT2]
gi|383440016|gb|EID47791.1| hypothetical protein MUY_03095 [Bacillus licheniformis WX-02]
Length = 240
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP +N L ID K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKIFMKLAKEIYVAAKE-GGPDPESNASLRLVIDKAKNAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ AIK + ++ Y E++ + P+ +A +V CL +R
Sbjct: 61 MPNDNIDRAIKKASGSQDGKSYEEITYEGYGPS-GVAVMVK-----CLTDNKNRTATSVR 114
Query: 148 ANFISN 153
F N
Sbjct: 115 TAFSKN 120
>gi|222099181|ref|YP_002533749.1| hypothetical protein CTN_0207 [Thermotoga neapolitana DSM 4359]
gi|221571571|gb|ACM22383.1| Hypothetical Protein CTN_0207 [Thermotoga neapolitana DSM 4359]
Length = 254
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +K+ +FT L +++ +A +EGGG +P TN RL + I+ + +
Sbjct: 3 SGHNKWANIKHRKMAQDAKKSKIFTKLIREIIVAAREGGG-NPETNPRLRAAIERARAEN 61
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 62 MPKENIEKAIK 72
>gi|365174838|ref|ZP_09362277.1| YebC/PmpR family DNA-binding regulatory protein [Synergistes sp.
3_1_syn1]
gi|363614250|gb|EHL65748.1| YebC/PmpR family DNA-binding regulatory protein [Synergistes sp.
3_1_syn1]
Length = 248
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHS W I+H KAA+D +K F L K + A KEGGG DPN N+RL ++ K +
Sbjct: 2 SGHSHWSGIKHRKAAQDAKKGVAFQKLVKDIIAAAKEGGG-DPNANFRLKVAVERAKAGN 60
Query: 88 MPMTTIENAIK 98
+P+ IE IK
Sbjct: 61 VPVDNIERGIK 71
>gi|381152653|ref|ZP_09864522.1| DNA-binding regulatory protein, YebC/PmpR family [Methylomicrobium
album BG8]
gi|380884625|gb|EIC30502.1| DNA-binding regulatory protein, YebC/PmpR family [Methylomicrobium
album BG8]
Length = 249
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KA +D ++ +FT L +++ +AVK GG D +N L + ID S+
Sbjct: 2 AGHSKWANIRHRKAGQDAKRGKIFTKLLREITVAVKS-GGPDAGSNPTLRTAIDKALGSN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
M TI+NAIK + + Y E+ + P
Sbjct: 61 MRRDTIDNAIKKASGAQEGVNYEEVRYEGYGP 92
>gi|148263484|ref|YP_001230190.1| hypothetical protein Gura_1416 [Geobacter uraniireducens Rf4]
gi|189038690|sp|A5G9Y5.1|Y1416_GEOUR RecName: Full=Probable transcriptional regulatory protein Gura_1416
gi|146396984|gb|ABQ25617.1| protein of unknown function DUF28 [Geobacter uraniireducens Rf4]
Length = 247
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ +FT L K++ +A K GGG DP N RL + ID K +
Sbjct: 2 SGHNKWSTIKHKKGAADAKRGKIFTKLIKEITVAAKLGGG-DPEGNPRLRTAIDKAKGEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E + + P G+A LV M+ R
Sbjct: 61 MPKDNIERAIKKGTGGMDGVVYEETTYEGYGPG----------GAAVLVEVMTDNR---- 106
Query: 148 ANFISNRLGLFLECS 162
+S+ +F +C+
Sbjct: 107 NRTVSDVRSIFTKCN 121
>gi|307545149|ref|YP_003897628.1| hypothetical protein HELO_2559 [Halomonas elongata DSM 2581]
gi|307217173|emb|CBV42443.1| hypothetical protein HELO_2559 [Halomonas elongata DSM 2581]
Length = 250
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L +A + GGG +PN N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAARHGGG-EPNDNPRLRAAIDKALANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ A+ E+ + P EG A +V AM+ R
Sbjct: 61 MTKDTIQRAVDRGAGNSEGDDMEEVVYEGYGP----------EGVAVMVEAMTDNR 106
>gi|291280038|ref|YP_003496873.1| hypothetical protein DEFDS_1661 [Deferribacter desulfuricans
SSM1]
gi|290754740|dbj|BAI81117.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 249
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D +K +FT ++++L +A K GG+DP N RL ++ ++++
Sbjct: 2 AGHSKWANIKHRKAAQDAKKGKIFTKIARELMVAAK-IGGSDPEMNPRLRVALEKARQAN 60
Query: 88 MPMTTIENAIK 98
MP +E AIK
Sbjct: 61 MPKENVERAIK 71
>gi|332799124|ref|YP_004460623.1| hypothetical protein TepRe1_1170 [Tepidanaerobacter acetatoxydans
Re1]
gi|332696859|gb|AEE91316.1| UPF0082 protein yeeN [Tepidanaerobacter acetatoxydans Re1]
Length = 245
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI++ KA D +K ++T SK + +A +E GG DPNTN RL I+ K+++
Sbjct: 2 SGHSKWSNIKNKKAKMDAQKGKIYTRFSKLIIVAARE-GGPDPNTNSRLKDIIEKAKQAN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPNDNIERAIK 71
>gi|168334025|ref|ZP_02692244.1| hypothetical protein Epulo_03794 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 244
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H KA D +K +FT L +++ +AVK GG+DPNTN RL I K ++
Sbjct: 2 SGHSKFANIKHRKAKNDAQKGKIFTKLGREIAVAVK-SGGSDPNTNNRLKDIIAKAKSNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV 127
MP TI +IK + Y ++ + P IA +V
Sbjct: 61 MPNDTIARSIKKAEGDADGVNYEYITYEGYGPN-GIAVIV 99
>gi|371778148|ref|ZP_09484470.1| hypothetical protein AnHS1_12089 [Anaerophaga sp. HS1]
Length = 250
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++A +FT ++K++++AVKE GG DP +N RL I + +
Sbjct: 2 AGHSKWANIKHRKGAQDAKRAKMFTRITKEIQVAVKE-GGPDPESNPRLRLAIQNARSVN 60
Query: 88 MPMTTIENAI 97
MP I AI
Sbjct: 61 MPKDNINRAI 70
>gi|367002556|ref|XP_003686012.1| hypothetical protein TPHA_0F00920 [Tetrapisispora phaffii CBS 4417]
gi|357524312|emb|CCE63578.1| hypothetical protein TPHA_0F00920 [Tetrapisispora phaffii CBS 4417]
Length = 308
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGG-TDPNTNYRLASTIDYCKKS 86
+GH+KW I+H KA D EK LF+ + +++LAVK GGG TDP N RLA+ ++ K+
Sbjct: 42 SGHNKWSTIKHDKAKNDAEKNKLFSKFANQIQLAVKLGGGSTDPTLNIRLATAMEAANKN 101
Query: 87 SMPMTTIENAIK 98
++ ++NAIK
Sbjct: 102 NVSKKVVDNAIK 113
>gi|291550434|emb|CBL26696.1| conserved hypothetical protein TIGR01033 [Ruminococcus torques
L2-14]
Length = 243
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKEGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKIGRELAIAVKEGGSADPTNNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSC 100
MP TIE IK
Sbjct: 62 MPNDTIERNIKKA 74
>gi|170726920|ref|YP_001760946.1| hypothetical protein Swoo_2574 [Shewanella woodyi ATCC 51908]
gi|169812267|gb|ACA86851.1| protein of unknown function DUF28 [Shewanella woodyi ATCC 51908]
Length = 248
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+D + N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDADANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|346224890|ref|ZP_08846032.1| hypothetical protein AtheD1_06986 [Anaerophaga thermohalophila
DSM 12881]
Length = 250
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A+D ++A +FT ++K++++AVKE GG DP TN RL + + +
Sbjct: 2 SGHSKWANIKHRKGAQDAKRAKMFTRITKEIQIAVKE-GGPDPETNPRLRLAVQNARSVN 60
Query: 88 MPMTTIENAI 97
MP I AI
Sbjct: 61 MPKDNINRAI 70
>gi|256053254|ref|XP_002570114.1| hypothetical protein [Schistosoma mansoni]
gi|350646528|emb|CCD58838.1| hypothetical protein Smp_098090 [Schistosoma mansoni]
Length = 292
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCK 84
R+AGH+ WQN++HIK A D+EKA K ++ A++EGGG DP N +LA+ + K
Sbjct: 44 RFAGHAHWQNVKHIKEAGDREKAQNALYYVKAVQRAIREGGGIRDPKKNSKLAAVLAEAK 103
Query: 85 KSSMPMTTIENAIKSCNVPE 104
++P +T+E + + N E
Sbjct: 104 SKAVPFSTLEKQLNTDNEIE 123
>gi|242001218|ref|XP_002435252.1| coiled-coil domain-containing protein, putative [Ixodes scapularis]
gi|215498582|gb|EEC08076.1| coiled-coil domain-containing protein, putative [Ixodes scapularis]
Length = 300
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 18 PDEGYLLVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLA 77
P + R+AGHS WQN+RHIKAAKD K + + ++ AVK GGG DP N LA
Sbjct: 45 PPHAFESRRHAGHSHWQNVRHIKAAKDAHKMSQTDKFVRLIQAAVKVGGGPDPKLNRSLA 104
Query: 78 STIDYCKKSSMPM-TTIENAIKSCNVPE 104
+ I+ K++ + IE AIK + E
Sbjct: 105 NAIENAKRTQVVTNAAIELAIKRASGAE 132
>gi|432922401|ref|XP_004080334.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Oryzias latipes]
Length = 294
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++HIK KD+ + +F +++AVKE GG++P+ N LA ++ C+ +
Sbjct: 55 AGHNKWSKVKHIKGPKDEARGRMFMKFGMMIRIAVKE-GGSNPDLNVNLAHILEQCRSKN 113
Query: 88 MPMTTIENAIKS 99
MP +I+ A+KS
Sbjct: 114 MPKASIDAAVKS 125
>gi|410583596|ref|ZP_11320701.1| DNA-binding regulatory protein, YebC/PmpR family [Thermaerobacter
subterraneus DSM 13965]
gi|410504458|gb|EKP93968.1| DNA-binding regulatory protein, YebC/PmpR family [Thermaerobacter
subterraneus DSM 13965]
Length = 248
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KA +D +K +F+ L++++ AV++GGG DP N RL ++ ++ S
Sbjct: 2 AGHSKWANRKHRKARQDAKKGKIFSKLAREIITAVRQGGG-DPEANPRLRLALERARQFS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP IE AIK Y EL + P
Sbjct: 61 MPAENIERAIKRGLGESEAENYEELVYEGYGP 92
>gi|237654505|ref|YP_002890819.1| hypothetical protein Tmz1t_3853 [Thauera sp. MZ1T]
gi|237625752|gb|ACR02442.1| protein of unknown function DUF28 [Thauera sp. MZ1T]
Length = 241
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ F+ L+K++ +A K GGG DP N RL +D K +
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGAAFSKLAKEITVAAKMGGG-DPGFNPRLRLAVDKAKGVN 60
Query: 88 MPMTTIENAIK 98
MP I+NAIK
Sbjct: 61 MPKDKIDNAIK 71
>gi|163751782|ref|ZP_02158999.1| hypothetical protein KT99_11585 [Shewanella benthica KT99]
gi|161328346|gb|EDP99506.1| hypothetical protein KT99_11585 [Shewanella benthica KT99]
Length = 248
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KAA+D ++ LFT ++L +A +E GG+D ++N RL + ID ++
Sbjct: 2 SGHSKWDNIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDADSNPRLRAAIDKSLSNN 60
Query: 88 MPMTTIENAIK 98
M TIE A+K
Sbjct: 61 MTRDTIERAVK 71
>gi|390949089|ref|YP_006412848.1| YebC/PmpR family DNA-binding regulatory protein [Thiocystis
violascens DSM 198]
gi|390425658|gb|AFL72723.1| DNA-binding regulatory protein, YebC/PmpR family [Thiocystis
violascens DSM 198]
Length = 249
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D+++ ++T L +++ +A +E GG DP N RL +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDKQRGKMWTKLIREVTVAARESGG-DPGANPRLRLAMDKAFGAN 60
Query: 88 MPMTTIENAIK 98
MP T+E AIK
Sbjct: 61 MPRDTVERAIK 71
>gi|452943699|ref|YP_007499864.1| DNA-binding regulatory protein, YebC/PmpR family
[Hydrogenobaculum sp. HO]
gi|452882117|gb|AGG14821.1| DNA-binding regulatory protein, YebC/PmpR family
[Hydrogenobaculum sp. HO]
Length = 249
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS W I+H KA D +K LF L +++ +A K GG DPN N RL I+ +K S
Sbjct: 2 AGHSHWAQIKHKKAKVDAQKGKLFGKLIREITVATKLGG-PDPNANPRLRMAIEAARKVS 60
Query: 88 MPMTTIENAIK 98
MPM TIE AIK
Sbjct: 61 MPMDTIEKAIK 71
>gi|331084959|ref|ZP_08334046.1| hypothetical protein HMPREF0987_00349 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408659|gb|EGG88124.1| hypothetical protein HMPREF0987_00349 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 243
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKEGGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKIGRELAVAVKEGGGPDPANNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ +IK + Y ++ + P G+A +V A++ + +
Sbjct: 62 MPNDNIDRSIKKAAGEGSADNYEHITYEGYGPN----------GTAIIVKALTDNKNRTA 111
Query: 148 AN 149
+N
Sbjct: 112 SN 113
>gi|376259562|ref|YP_005146282.1| YebC/PmpR family DNA-binding regulatory protein [Clostridium sp.
BNL1100]
gi|373943556|gb|AEY64477.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium sp.
BNL1100]
Length = 246
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A D +A +FT L +++++AV+ GG DPN N +L I CK ++
Sbjct: 2 SGHSKWANIKRQKGAADAVRAKIFTKLGREIQIAVR-MGGADPNANSKLKDIIAKCKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ +IK + + Y E++ + P
Sbjct: 61 MPNDNIQRSIKKASGEADGSNYEEITYEGYGP 92
>gi|74318233|ref|YP_315973.1| hypothetical protein Tbd_2215 [Thiobacillus denitrificans ATCC
25259]
gi|119372128|sp|Q3SGS9.1|Y2215_THIDA RecName: Full=Probable transcriptional regulatory protein Tbd_2215
gi|74057728|gb|AAZ98168.1| Protein of unknown function DUF28 [Thiobacillus denitrificans ATCC
25259]
Length = 243
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ +A K GGG DP N RL I+ K S
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKIFTKLIKEITVAAKMGGG-DPAMNPRLRLAIEKGKAES 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
+P IENAIK N E Y GY + + CL T ++A +
Sbjct: 61 LPKDNIENAIKRGTGQLEGVNYEEARYEGYGIGGVAVMVDCLTDNKTRTVADV 113
>gi|338730388|ref|YP_004659780.1| hypothetical protein Theth_0596 [Thermotoga thermarum DSM 5069]
gi|335364739|gb|AEH50684.1| protein of unknown function DUF28 [Thermotoga thermarum DSM 5069]
Length = 253
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +++ LFT L +++ +A + GGG +P TN RL + I+ +++S
Sbjct: 2 SGHNKWANIKHRKMAQDAKRSQLFTKLIREIIVAARLGGG-NPETNPRLRAAIEKAREAS 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKENIEKAIK 71
>gi|189499516|ref|YP_001958986.1| hypothetical protein Cphamn1_0542 [Chlorobium phaeobacteroides
BS1]
gi|226707715|sp|B3EMM7.1|Y542_CHLPB RecName: Full=Probable transcriptional regulatory protein
Cphamn1_0542
gi|189494957|gb|ACE03505.1| protein of unknown function DUF28 [Chlorobium phaeobacteroides
BS1]
Length = 250
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ LFT L +++ +A K GGG DP N RL ID K +S
Sbjct: 2 SGHSKWATIKRKKAATDQKRGNLFTKLVREITIAAKTGGG-DPGGNPRLRLAIDTAKMNS 60
Query: 88 MPMTTIENAIK 98
MP I+ AIK
Sbjct: 61 MPNDNIQRAIK 71
>gi|254785045|ref|YP_003072473.1| hypothetical protein TERTU_0864 [Teredinibacter turnerae T7901]
gi|237685228|gb|ACR12492.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
Length = 247
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++A +FT + ++L +A K GGG +P N +L +TID ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRAKIFTKVIRELTVAAKAGGG-NPEDNPKLRTTIDKALAAN 60
Query: 88 MPMTTIENAI 97
M TIE AI
Sbjct: 61 MKRDTIEKAI 70
>gi|433444143|ref|ZP_20409153.1| hypothetical protein AF6_0696 [Anoxybacillus flavithermus
TNO-09.006]
gi|432001791|gb|ELK22660.1| hypothetical protein AF6_0696 [Anoxybacillus flavithermus
TNO-09.006]
Length = 245
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP TN L I+ K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKMGGG-DPTTNATLRLAIEKAKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P ++ L + ++ RV F +
Sbjct: 61 MPNENIERAIKKATGNQEHTHYEEIRYEGYGPGGVAVMVICLTDNKNRTASNVRVAFSKN 120
Query: 148 A---------NFISNRLGLFLECSEPI 165
+++ +R GL + E +
Sbjct: 121 GGNLGETGCVSYLFDRKGLIVIARENL 147
>gi|391340484|ref|XP_003744570.1| PREDICTED: probable transcriptional regulatory protein DIP1378-like
[Metaseiulus occidentalis]
Length = 276
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKK 85
R+AGH+ WQN+RHIKAA D K+T + ++ AV GGG DP N LA I+ K+
Sbjct: 30 RFAGHAHWQNVRHIKAANDAHKSTTTNRFVRVIEAAVVTGGGPDPRFNPTLAKAIEQAKR 89
Query: 86 SS-MPMTTIENAIKSCNVP 103
+ + IE AIK + P
Sbjct: 90 TQVITKAVIETAIKRASDP 108
>gi|348542668|ref|XP_003458806.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Oreochromis niloticus]
Length = 296
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++H+K KD+ + +F +++AVKE GG++P N LA ++ C+ +
Sbjct: 57 AGHNKWSKVKHVKGPKDEARGRMFMKFGMMIRIAVKE-GGSNPELNLNLAHILEQCRSKN 115
Query: 88 MPMTTIENAIKS 99
MP +I+ AIKS
Sbjct: 116 MPKASIDAAIKS 127
>gi|83859818|ref|ZP_00953338.1| hypothetical protein OA2633_07454 [Oceanicaulis sp. HTCC2633]
gi|83852177|gb|EAP90031.1| hypothetical protein OA2633_07454 [Oceanicaulis sp. HTCC2633]
Length = 256
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ +A LF+ LSK++ +AVK GG DP+ N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDKARAKLFSRLSKEIMVAVKM-GGPDPDMNPRLRLAVQNAKGQS 60
Query: 88 MPMTTIENAIKSC 100
MP IE AI
Sbjct: 61 MPKDNIERAINKA 73
>gi|404495603|ref|YP_006719709.1| hypothetical protein Gmet_0743 [Geobacter metallireducens GS-15]
gi|418067852|ref|ZP_12705183.1| protein of unknown function DUF28 [Geobacter metallireducens
RCH3]
gi|119369548|sp|Q39XN9.1|Y743_GEOMG RecName: Full=Probable transcriptional regulatory protein
Gmet_0743
gi|78193218|gb|ABB30985.1| protein of unknown function DUF28 [Geobacter metallireducens
GS-15]
gi|373558099|gb|EHP84461.1| protein of unknown function DUF28 [Geobacter metallireducens
RCH3]
Length = 247
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ +FT + K++ +A K GGG DPN N RL S +D K +
Sbjct: 2 SGHNKWSTIKHKKGAADAKRGKVFTKIIKEITVAAKLGGG-DPNGNPRLRSAVDKAKAEN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|212638553|ref|YP_002315073.1| hypothetical protein Aflv_0709 [Anoxybacillus flavithermus WK1]
gi|226708032|sp|B7GFM4.1|Y709_ANOFW RecName: Full=Probable transcriptional regulatory protein Aflv_0709
gi|212560033|gb|ACJ33088.1| Uncharacterized conserved protein [Anoxybacillus flavithermus WK1]
Length = 245
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP TN L I+ K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKMGGG-DPTTNATLRLAIEKAKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P ++ L + ++ RV F +
Sbjct: 61 MPNENIERAIKKATGNQEHTHYEEIRYEGYGPGGVAVMVICLTDNKNRTASNVRVAFSKN 120
Query: 148 A---------NFISNRLGLFLECSEPI 165
+++ +R GL + E +
Sbjct: 121 GGNLGETGCVSYLFDRKGLIVIARENL 147
>gi|326202951|ref|ZP_08192818.1| protein of unknown function DUF28 [Clostridium papyrosolvens DSM
2782]
gi|325987028|gb|EGD47857.1| protein of unknown function DUF28 [Clostridium papyrosolvens DSM
2782]
Length = 248
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A D +A +FT L +++++AV+ GG DPN N +L I CK ++
Sbjct: 2 SGHSKWANIKRQKGAADAVRAKIFTKLGREIQIAVRI-GGADPNANSKLKDIIAKCKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ +IK + + Y E++ + P
Sbjct: 61 MPNDNIQRSIKKASGEADGSNYEEITYEGYGP 92
>gi|297569181|ref|YP_003690525.1| protein of unknown function DUF28 [Desulfurivibrio alkaliphilus
AHT2]
gi|296925096|gb|ADH85906.1| protein of unknown function DUF28 [Desulfurivibrio alkaliphilus
AHT2]
Length = 249
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A D ++ +FT L K++ +A + GGG D + N RL + + K +
Sbjct: 2 AGHSKWANIKHRKGAMDAKRGKIFTRLIKEIMVAARLGGG-DIDGNPRLRTAVAAAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK Y E++ + P G A +V M+ RVR
Sbjct: 61 MPKDNIERAIKKGTGELEGVAYEEITYEGYGPG----------GVAVMVECMTDNRVRTV 110
Query: 146 PSANFISNRLG 156
F+ ++ G
Sbjct: 111 ADVRFMFSKAG 121
>gi|308049719|ref|YP_003913285.1| hypothetical protein Fbal_2008 [Ferrimonas balearica DSM 9799]
gi|307631909|gb|ADN76211.1| protein of unknown function DUF28 [Ferrimonas balearica DSM 9799]
Length = 248
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L ++ +E GG+D + N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVSARE-GGSDADANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TIE A+K
Sbjct: 61 MTRDTIERAVK 71
>gi|410657500|ref|YP_006909871.1| DNA-binding regulatory protein, YebC/PmpR family [Dehalobacter sp.
DCA]
gi|410660537|ref|YP_006912908.1| DNA-binding regulatory protein, YebC/PmpR family [Dehalobacter sp.
CF]
gi|409019855|gb|AFV01886.1| DNA-binding regulatory protein, YebC/PmpR family [Dehalobacter sp.
DCA]
gi|409022893|gb|AFV04923.1| DNA-binding regulatory protein, YebC/PmpR family [Dehalobacter sp.
CF]
Length = 251
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KA D K +FT L++++ +A + GG DPN N+RL ID K ++
Sbjct: 2 SGHSKWANIKHKKAKTDAIKGRIFTKLAREIMVAAR-AGGADPNGNFRLKIAIDNAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
+P I+ AI+ Y EL + P +A +V L
Sbjct: 61 LPNDNIQRAIQKGAGAGEGANYEELRYEGYGPG-GVAIMVEL 101
>gi|389578806|ref|ZP_10168833.1| DNA-binding regulatory protein, YebC/PmpR family [Desulfobacter
postgatei 2ac9]
gi|389400441|gb|EIM62663.1| DNA-binding regulatory protein, YebC/PmpR family [Desulfobacter
postgatei 2ac9]
Length = 247
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D+++A +FT L K++ +A + GGG DP N RL ID K +
Sbjct: 2 SGHSKWSTIKHKKGAADKKRAKVFTKLIKEITVAARMGGG-DPGANPRLRRAIDSAKTQN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP ++ AIK + Y E+ + P +A +V CL ++ R
Sbjct: 61 MPKDNVDRAIKKGTGDMDGVNYEEIIYEGYGPG-GVAVMVE-----CLTD--NKNRTIAD 112
Query: 148 ANFISNRLG 156
+I N+ G
Sbjct: 113 VRYIFNKAG 121
>gi|350040801|dbj|GAA38795.1| UPF0082 protein Kole_1935 [Clonorchis sinensis]
Length = 293
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCK 84
R+AGHS WQN+RH K A+D++K+ + + A+K GGG DP N +LAS + K
Sbjct: 40 RFAGHSHWQNVRHTKEARDKQKSKASQIYIRAVNNAIKAGGGVRDPKLNSQLASVLAEAK 99
Query: 85 KSSMPMTTIENAIKS 99
+S+P++T+E IK+
Sbjct: 100 ANSVPLSTLERFIKA 114
>gi|256831250|ref|YP_003159978.1| hypothetical protein Dbac_3490 [Desulfomicrobium baculatum DSM
4028]
gi|256580426|gb|ACU91562.1| protein of unknown function DUF28 [Desulfomicrobium baculatum DSM
4028]
Length = 246
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+H K +D ++ +FT ++K++ LA K GG DP+ N RL + ID K +
Sbjct: 2 AGHSKWKNIQHRKGRQDLKRGKMFTKVTKEIILAAK--GGGDPDMNARLRAAIDAAKAVN 59
Query: 88 MPMTTIENAIK 98
+P I+ AIK
Sbjct: 60 LPKDKIDTAIK 70
>gi|342216108|ref|ZP_08708755.1| DNA-binding regulatory protein, YebC/PmpR family [Peptoniphilus sp.
oral taxon 375 str. F0436]
gi|341586998|gb|EGS30398.1| DNA-binding regulatory protein, YebC/PmpR family [Peptoniphilus sp.
oral taxon 375 str. F0436]
Length = 245
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI++ K +D +K +FT +++ + +A +EGGG DP+ N L ID K +
Sbjct: 2 SGHSKWNNIKNKKGKEDAKKGRVFTKMARYIMVAAREGGG-DPDYNPSLKMAIDKAKSYN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK ++ Y E++ + P+ + +L + + R F +
Sbjct: 61 MPNDNIERAIKKGTGEDDDTHYEEVTYEGYGPSGIAVMVKTLTDNRNRTAPEMRHAFDRN 120
Query: 148 A---------NFISNRLG-LFLECSEPIT 166
+F+ ++LG L+LE E +
Sbjct: 121 GGNLGTSGCVSFMFDKLGVLYLEKEEGVD 149
>gi|392407067|ref|YP_006443675.1| YebC/PmpR family DNA-binding regulatory protein [Anaerobaculum
mobile DSM 13181]
gi|390620203|gb|AFM21350.1| DNA-binding regulatory protein, YebC/PmpR family [Anaerobaculum
mobile DSM 13181]
Length = 250
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI++ KAA+D ++ LF L K + A +EGGG DP+ N L + I+ K+++
Sbjct: 2 SGHSKWANIKYRKAAQDSKRGKLFQKLVKAIITAAREGGG-DPSANVALKNAIEKAKEAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
+PM I+ AIK Y ++ + P G A LV AM+ R R
Sbjct: 61 VPMENIQRAIKRGTGEIEGASYEQVIYEGYGPG----------GVAILVEAMTDNRNRTA 110
Query: 146 PSANFISNRLG 156
+I R G
Sbjct: 111 SDMRYIFTRHG 121
>gi|291522356|emb|CBK80649.1| conserved hypothetical protein TIGR01033 [Coprococcus catus GD/7]
Length = 242
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKE GG+DPN N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTIIGRELAVAVKE-GGSDPNNNSRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP TIE IK S N N Y GY
Sbjct: 61 MPNDTIERGIKKAAGDLGSVNYENNTYEGY 90
>gi|195952876|ref|YP_002121166.1| hypothetical protein HY04AAS1_0501 [Hydrogenobaculum sp. Y04AAS1]
gi|226707647|sp|B4U7S7.1|Y501_HYDS0 RecName: Full=Probable transcriptional regulatory protein
HY04AAS1_0501
gi|195932488|gb|ACG57188.1| protein of unknown function DUF28 [Hydrogenobaculum sp. Y04AAS1]
Length = 249
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS W I+H KA D +K LF L +++ +A K GG DPN N RL I+ +K S
Sbjct: 2 AGHSHWAQIKHKKAKVDAQKGKLFGKLIREITVATKLGG-PDPNANPRLRIAIEAARKVS 60
Query: 88 MPMTTIENAIK 98
MPM TIE AIK
Sbjct: 61 MPMDTIEKAIK 71
>gi|381158519|ref|ZP_09867752.1| DNA-binding regulatory protein, YebC/PmpR family [Thiorhodovibrio
sp. 970]
gi|380879877|gb|EIC21968.1| DNA-binding regulatory protein, YebC/PmpR family [Thiorhodovibrio
sp. 970]
Length = 249
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D+++ ++T L +++ ++ +E GG DP +N RL +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDKKRGKIWTKLIREVTVSARE-GGADPGSNPRLRLAMDKALGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP T++ AIK ++ Y E+ + P
Sbjct: 61 MPKDTVDRAIKRGAGADDGDNYEEIRYEGYGP 92
>gi|323487122|ref|ZP_08092430.1| hypothetical protein HMPREF9474_04181 [Clostridium symbiosum
WAL-14163]
gi|323694629|ref|ZP_08108795.1| glucose-1-phosphate adenylyltransferase [Clostridium symbiosum
WAL-14673]
gi|355623211|ref|ZP_09047082.1| hypothetical protein HMPREF1020_01161 [Clostridium sp. 7_3_54FAA]
gi|323399623|gb|EGA92013.1| hypothetical protein HMPREF9474_04181 [Clostridium symbiosum
WAL-14163]
gi|323501397|gb|EGB17293.1| glucose-1-phosphate adenylyltransferase [Clostridium symbiosum
WAL-14673]
gi|354822539|gb|EHF06897.1| hypothetical protein HMPREF1020_01161 [Clostridium sp. 7_3_54FAA]
Length = 242
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDSAKGKIFTVIGREIAVAVKE-GGADPANNSRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK N Y L+ + P G A +V A++ + +
Sbjct: 61 MPNDTIERGIKKAAGDANSVNYENLTYEGYGPN----------GVAIIVDALTDNKNRTA 110
Query: 148 ANFIS 152
AN S
Sbjct: 111 ANVRS 115
>gi|385331784|ref|YP_005885735.1| protein YebC [Marinobacter adhaerens HP15]
gi|311694934|gb|ADP97807.1| protein YebC [Marinobacter adhaerens HP15]
Length = 247
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT + ++L +A ++GGG P+ N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKIIRELTVAARQGGGN-PDDNPRLRAVIDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
M TIE A++ + Y E + + P
Sbjct: 61 MKKDTIERAVERGTGGGDDDNYEEQTYEGYGP 92
>gi|56380971|dbj|BAD76879.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 252
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP +N L I+ K ++
Sbjct: 8 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKSGGG-DPASNPSLRLVIEKAKAAN 66
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P +A +V CL +R
Sbjct: 67 MPSENIERAIKKATGTQEHTNYEEIRYEGYGPG-GVAVMV-----VCLTDNKNRTAANVR 120
Query: 148 ANFISN 153
A F N
Sbjct: 121 AAFAKN 126
>gi|335428865|ref|ZP_08555775.1| hypothetical protein HLPCO_07844 [Haloplasma contractile SSD-17B]
gi|335429301|ref|ZP_08556200.1| hypothetical protein HLPCO_10003 [Haloplasma contractile SSD-17B]
gi|334889999|gb|EGM28281.1| hypothetical protein HLPCO_10003 [Haloplasma contractile SSD-17B]
gi|334891806|gb|EGM30052.1| hypothetical protein HLPCO_07844 [Haloplasma contractile SSD-17B]
Length = 245
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI H K A+D ++A F LS+++ +A K+ G DP+TN L ID +
Sbjct: 2 AGHSKWKNIMHRKGAQDAKRAKQFQKLSRQIYVAAKQ-GDKDPDTNPNLRLAIDKARAFD 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE A+K + + E+ + P G A +V+ +S R +
Sbjct: 61 MPKDNIERAVKKAAGDLDGQDFFEIVYEGYAPN----------GVAVMVNCLSDNRNRTA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|289450184|ref|YP_003475615.1| YebC/PmpR family DNA-binding regulatory protein [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184731|gb|ADC91156.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 241
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A D +K LFT + +++++AVK GG DPN+N +L I K ++
Sbjct: 2 SGHSKWNNIKRKKGAADAQKGALFTKIGREIQVAVK-SGGPDPNSNSKLKDIIAKAKMNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ +I + Y E+S + P G A +V A++ R +
Sbjct: 61 MPNDNIQRSINKAAGIGSDTNYEEISYEGYGPA----------GVAVIVEALTDNRNRTA 110
Query: 148 AN 149
A+
Sbjct: 111 AD 112
>gi|381400228|ref|ZP_09925205.1| hypothetical protein KKB_00262 [Kingella kingae PYKK081]
gi|380834710|gb|EIC14538.1| hypothetical protein KKB_00262 [Kingella kingae PYKK081]
Length = 241
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A K+GGG DPN N RL +D ++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTKLIKEITIAAKQGGG-DPNANPRLRLAMDKAWDNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVDYIEL 85
>gi|359408665|ref|ZP_09201133.1| protein of unknown function DUF28 [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675418|gb|EHI47771.1| protein of unknown function DUF28 [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 247
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L K+L +A + GGTDP +N RL + + C+ ++
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKIFTRLIKELAVAAR--GGTDPASNPRLRTALAGCRAAN 59
Query: 88 MPMTTIENAIK 98
MP IE +K
Sbjct: 60 MPKDNIERVLK 70
>gi|218961235|ref|YP_001741010.1| hypothetical protein CLOAM0931 [Candidatus Cloacamonas
acidaminovorans]
gi|167729892|emb|CAO80804.1| conserved hypothetical protein [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 250
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW +I+H K A D ++ +FT L K++ LA K GGG DP+ N RL + I+ K+++
Sbjct: 2 SGHNKWSSIKHKKGAADAKRGKVFTRLVKEIILAAKTGGG-DPDMNPRLRTAINTAKENN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKENIERAIK 71
>gi|161551793|ref|YP_148447.2| hypothetical protein GK2594 [Geobacillus kaustophilus HTA426]
gi|67462017|sp|Q5KWQ7.2|Y2594_GEOKA RecName: Full=Probable transcriptional regulatory protein GK2594
Length = 246
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP +N L I+ K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKSGGG-DPASNPSLRLVIEKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P +A +V CL +R
Sbjct: 61 MPSENIERAIKKATGTQEHTNYEEIRYEGYGPG-GVAVMV-----VCLTDNKNRTAANVR 114
Query: 148 ANFISN 153
A F N
Sbjct: 115 AAFAKN 120
>gi|89094834|ref|ZP_01167767.1| hypothetical protein MED92_08732 [Neptuniibacter caesariensis]
gi|89080889|gb|EAR60128.1| hypothetical protein MED92_08732 [Oceanospirillum sp. MED92]
Length = 246
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L ++ KEGGG P+ N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELVVSAKEGGGN-PDDNPRLRAAVDKALGAN 60
Query: 88 MPMTTIENAIK 98
M TI+ AI+
Sbjct: 61 MKRDTIDKAIQ 71
>gi|260943678|ref|XP_002616137.1| hypothetical protein CLUG_03378 [Clavispora lusitaniae ATCC 42720]
gi|238849786|gb|EEQ39250.1| hypothetical protein CLUG_03378 [Clavispora lusitaniae ATCC 42720]
Length = 256
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 38/51 (74%)
Query: 158 FLECSEPITRMKQASVLLATALAHNVFPVPGGPNRRTPLGGSIPRLTNFSG 208
F SEP+TR+ ASV LATA A +V PVPGGP +R PLGGSIP LTN SG
Sbjct: 183 FWTSSEPMTRINVASVSLATARAQSVLPVPGGPYKRMPLGGSIPNLTNRSG 233
>gi|328948462|ref|YP_004365799.1| hypothetical protein Tresu_1602 [Treponema succinifaciens DSM 2489]
gi|328448786|gb|AEB14502.1| UPF0082 protein yeeN [Treponema succinifaciens DSM 2489]
Length = 247
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K D ++ LFT K++ +A K GGG DP++N RL + + K +S
Sbjct: 2 SGHSKWSTIKHAKGIADAKRGALFTKFIKEISIAAKMGGG-DPDSNPRLRTAMLKAKAAS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK Y EL + P G A LV ++ + +
Sbjct: 61 MPKDNIERAIKKGTGELGAVSYEELVYEGYAPG----------GVAVLVDVLTDNKNRAA 110
Query: 148 ANF--ISNRLGLFLECSEPITRM 168
A+ I N+ G L + +RM
Sbjct: 111 ADVRNIFNKNGGNLGTTGSTSRM 133
>gi|255020122|ref|ZP_05292192.1| hypothetical protein ACA_1331 [Acidithiobacillus caldus ATCC 51756]
gi|340783535|ref|YP_004750142.1| hypothetical protein Atc_2794 [Acidithiobacillus caldus SM-1]
gi|254970415|gb|EET27907.1| hypothetical protein ACA_1331 [Acidithiobacillus caldus ATCC 51756]
gi|340557686|gb|AEK59440.1| conserved hypothetical protein [Acidithiobacillus caldus SM-1]
Length = 250
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KAA+D +K +FT L +++ +A + GGG D ++N RL + +D ++
Sbjct: 2 AGHSKWANIKFRKAAQDAKKGKIFTRLIREITVAARAGGG-DASSNPRLRTALDKAYANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
M T+E AIK Y E++ + P+ G A L+ M+ RVR
Sbjct: 61 MAKDTVERAIKRGTGELEGVDYEEVTYEGYGPS----------GVAILIETMTDNRVRTV 110
Query: 146 PSANFISNRLGLFLECSEPITRMKQ 170
I ++ G L S + + Q
Sbjct: 111 AEIRHIFSKRGGNLGTSGSVAYLFQ 135
>gi|383481647|ref|YP_005390562.1| hypothetical protein MCC_04730 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378933986|gb|AFC72489.1| hypothetical protein MCC_04730 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 253
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNTPENNPRLRNALTTARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV-SLEGSACLVSAMSRVRFPP 146
+P I+ AI S N NI Y E+ + P IA +V +L + +A R F
Sbjct: 62 LPKERIDKAINSANDSSNIENYTEIRYEGYAPN-GIAIIVEALTDNKNRTAAEVRSSFTK 120
Query: 147 ---------SANFISNRLGLFLECSEPITRMKQASVLLATALA 180
S N++ N G+ PI VL A A
Sbjct: 121 YGGSLGETGSVNYLFNHCGVI---QYPINIASNEDVLEAAIEA 160
>gi|157964633|ref|YP_001499457.1| hypothetical protein RMA_0775 [Rickettsia massiliae MTU5]
gi|157844409|gb|ABV84910.1| hypothetical protein RMA_0775 [Rickettsia massiliae MTU5]
Length = 308
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
+ AGHSK++NI+H K A+D+++A +FT L +++ A K G P N RL + + +
Sbjct: 54 INMAGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNIPENNPRLRNALTTAR 113
Query: 85 KSSMPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
++P I+ AI S N NI Y E+ + P G A +V A++
Sbjct: 114 SQNLPKERIDKAINSANDSSNIENYTEIRYEGYAPN----------GIAIIVEALT 159
>gi|333375746|ref|ZP_08467547.1| YebC like protein [Kingella kingae ATCC 23330]
gi|332969719|gb|EGK08733.1| YebC like protein [Kingella kingae ATCC 23330]
Length = 241
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A K+GGG DPN N RL +D ++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTKLIKEITIAAKQGGG-DPNANPRLRLAMDKAWDNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVDYIEL 85
>gi|297181905|gb|ADI18082.1| uncharacterized conserved protein [uncultured Acidobacteriales
bacterium HF0200_23L05]
Length = 249
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H K A D ++ LFT + K+L +A ++ GG DP+TN RL + I K ++
Sbjct: 2 SGHSKWASIKHKKGAADAKRGKLFTRIIKELTVAARDAGG-DPDTNPRLRTVIADAKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP I+ AI+ E Y E++ + P G+A L+ M+
Sbjct: 61 MPADNIKRAIRRGTGEEPGVSYEEVTYEAYGPG----------GAALLIECMT 103
>gi|335041174|ref|ZP_08534290.1| UPF0082 protein yeeN [Caldalkalibacillus thermarum TA2.A1]
gi|334178972|gb|EGL81621.1| UPF0082 protein yeeN [Caldalkalibacillus thermarum TA2.A1]
Length = 241
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+H K +D ++A +FT +SK++ AVK GG+DP+ N RL + K+++
Sbjct: 2 AGHSKWKNIQHRKERQDAKRAKIFTKISKEIYAAVK-NGGSDPDQNPRLRMALHKAKQAN 60
Query: 88 MPMTTIENAIKSC 100
MP I+ IK
Sbjct: 61 MPNDNIQRTIKKA 73
>gi|269216145|ref|ZP_06159999.1| protein YebC [Slackia exigua ATCC 700122]
gi|269130404|gb|EEZ61482.1| protein YebC [Slackia exigua ATCC 700122]
Length = 265
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA+D +++ LF+ LS+ + +A KEGG +P N LA+ ID K S
Sbjct: 2 SGHSKWATTKHRKAAQDAKRSALFSKLSRNITVAAKEGGDPNPENNASLAAAIDKAKGYS 61
Query: 88 MPMTTIENAIKSC 100
+P I+ AI
Sbjct: 62 LPKDKIKTAIDKA 74
>gi|402828518|ref|ZP_10877405.1| DNA-binding regulatory protein, YebC/PmpR family [Slackia sp.
CM382]
gi|402286326|gb|EJU34801.1| DNA-binding regulatory protein, YebC/PmpR family [Slackia sp.
CM382]
Length = 265
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA+D +++ LF+ LS+ + +A KEGG +P N LA+ ID K S
Sbjct: 2 SGHSKWATTKHRKAAQDAKRSALFSKLSRNITVAAKEGGDPNPENNASLAAAIDKAKGYS 61
Query: 88 MPMTTIENAIKSC 100
+P I+ AI
Sbjct: 62 LPKDKIKTAIDKA 74
>gi|15604319|ref|NP_220835.1| hypothetical protein RP455 [Rickettsia prowazekii str. Madrid E]
gi|383487288|ref|YP_005404968.1| hypothetical protein MA5_03570 [Rickettsia prowazekii str. GvV257]
gi|383487866|ref|YP_005405545.1| hypothetical protein M9W_02210 [Rickettsia prowazekii str.
Chernikova]
gi|383488713|ref|YP_005406391.1| hypothetical protein M9Y_02215 [Rickettsia prowazekii str.
Katsinyian]
gi|383489552|ref|YP_005407229.1| hypothetical protein MA3_02235 [Rickettsia prowazekii str. Dachau]
gi|383499692|ref|YP_005413053.1| hypothetical protein MA1_02210 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500528|ref|YP_005413888.1| hypothetical protein MA7_02205 [Rickettsia prowazekii str. RpGvF24]
gi|386082306|ref|YP_005998883.1| hypothetical protein rpr22_CDS445 [Rickettsia prowazekii str. Rp22]
gi|6226375|sp|Q9ZD88.1|Y455_RICPR RecName: Full=Probable transcriptional regulatory protein RP455
gi|3861011|emb|CAA14911.1| unknown [Rickettsia prowazekii str. Madrid E]
gi|292572070|gb|ADE29985.1| hypothetical protein rpr22_CDS445 [Rickettsia prowazekii str. Rp22]
gi|380757653|gb|AFE52890.1| hypothetical protein MA5_03570 [Rickettsia prowazekii str. GvV257]
gi|380758225|gb|AFE53461.1| hypothetical protein MA7_02205 [Rickettsia prowazekii str. RpGvF24]
gi|380760745|gb|AFE49267.1| hypothetical protein M9W_02210 [Rickettsia prowazekii str.
Chernikova]
gi|380761592|gb|AFE50113.1| hypothetical protein M9Y_02215 [Rickettsia prowazekii str.
Katsinyian]
gi|380762438|gb|AFE50958.1| hypothetical protein MA1_02210 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380763275|gb|AFE51794.1| hypothetical protein MA3_02235 [Rickettsia prowazekii str. Dachau]
Length = 252
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D++K+ +FT L +++ AVK G P N RL ++ + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKKSKVFTKLIREIVTAVKTGASNVPENNPRLRKALNAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S N N Y+E+ + P G A +V A++
Sbjct: 62 LPKERIDKAINSANDASNNESYMEIRYEGYAPN----------GIAIIVEALT 104
>gi|56477509|ref|YP_159098.1| hypothetical protein ebA3674 [Aromatoleum aromaticum EbN1]
gi|67462021|sp|Q5P3B7.1|Y2072_AROAE RecName: Full=Probable transcriptional regulatory protein
AZOSEA20720
gi|56313552|emb|CAI08197.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 241
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ +A + GGG DPN N RL +D K +
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKVFTKLIKEITVAARMGGG-DPNFNPRLRLAVDKAKAEN 60
Query: 88 MPMTTIENAIK 98
MP I+ AIK
Sbjct: 61 MPSENIDRAIK 71
>gi|384110140|ref|ZP_10010968.1| DNA-binding regulatory protein, YebC/PmpR family [Treponema sp.
JC4]
gi|383868306|gb|EID83977.1| DNA-binding regulatory protein, YebC/PmpR family [Treponema sp.
JC4]
Length = 247
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 13/145 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K D ++ +FT K++ +A + GGG DPN+N RL + I + ++
Sbjct: 2 SGHSKWATIKHAKGIADAKRGKIFTKFIKEISIAARMGGG-DPNSNPRLRTIIIKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y EL + P G A +V ++ + +
Sbjct: 61 MPKDNIERAIKKGTGEDGATSYEELVYEGYAPG----------GVAVMVEVLTDNKNRAA 110
Query: 148 ANF--ISNRLGLFLECSEPITRMKQ 170
A+ I + G L + ++RM Q
Sbjct: 111 ADIRNIFTKNGGNLGTTGSVSRMFQ 135
>gi|197303366|ref|ZP_03168405.1| hypothetical protein RUMLAC_02088 [Ruminococcus lactaris ATCC
29176]
gi|197297364|gb|EDY31925.1| DNA-binding regulatory protein, YebC/PmpR family [Ruminococcus
lactaris ATCC 29176]
Length = 243
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKEGG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTKIGRELAIAVKEGGSADPVNNSRLRDVIAKAKANN 61
Query: 88 MPMTTIENAIKSC 100
MP TIE IK
Sbjct: 62 MPNDTIERNIKKA 74
>gi|372487179|ref|YP_005026744.1| DNA-binding regulatory protein, YebC/PmpR family [Dechlorosoma
suillum PS]
gi|359353732|gb|AEV24903.1| DNA-binding regulatory protein, YebC/PmpR family [Dechlorosoma
suillum PS]
Length = 241
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ +A K GGG DP N RL ++ K S
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKVFTKLIKEITVAAKMGGG-DPAMNPRLRLAMEKAKGES 60
Query: 88 MPMTTIENAIK 98
MP I+NAIK
Sbjct: 61 MPKDNIDNAIK 71
>gi|317121683|ref|YP_004101686.1| hypothetical protein [Thermaerobacter marianensis DSM 12885]
gi|315591663|gb|ADU50959.1| protein of unknown function DUF28 [Thermaerobacter marianensis DSM
12885]
Length = 248
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KA +D ++ +F+ LS+++ AV++GGG DP N RL ++ ++ S
Sbjct: 2 AGHSKWANRKHRKARQDAKRGKIFSKLSREIITAVRQGGG-DPAANPRLRLALERARQFS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP +E AIK + Y EL
Sbjct: 61 MPAENVERAIKRGLGESDADNYEEL 85
>gi|406926778|gb|EKD62921.1| hypothetical protein ACD_52C00018G0001, partial [uncultured
bacterium]
Length = 112
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I K KD ++ LF+ L++ + +A K G G DP +N++L ID K +
Sbjct: 2 SGHSKWATIHRQKGVKDAKRGALFSKLARAITIAAKLGSGPDPGSNFKLRMAIDRAKAEN 61
Query: 88 MPMTTIENAIKSC 100
MP + IE AI S
Sbjct: 62 MPKSNIERAIASA 74
>gi|358635583|dbj|BAL22880.1| hypothetical protein AZKH_0534 [Azoarcus sp. KH32C]
Length = 241
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ +A + GGG DPN N RL +D K +
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKVFTKLIKEITVAARMGGG-DPNFNPRLRLAVDKAKAEN 60
Query: 88 MPMTTIENAIK 98
MP I+ AIK
Sbjct: 61 MPGENIDRAIK 71
>gi|53804482|ref|YP_113684.1| hypothetical protein MCA1220 [Methylococcus capsulatus str. Bath]
gi|67462035|sp|Q609L3.1|Y1220_METCA RecName: Full=Probable transcriptional regulatory protein MCA1220
gi|53758243|gb|AAU92534.1| conserved hypothetical protein TIGR01033 [Methylococcus capsulatus
str. Bath]
Length = 248
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ +A + GG DP N RL + ID ++
Sbjct: 2 AGHSKWANIQHRKGAQDAKRGKLFTKLIREITVASRT-GGPDPGNNPRLRTAIDKALVAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSR 141
M TIE AIK + + Y E+ + P IA LV CL +R
Sbjct: 61 MSKDTIERAIKKGSGAADGDNYEEVRYEGYGPG-GIAVLVD-----CLTDNRNR 108
>gi|114563354|ref|YP_750867.1| hypothetical protein Sfri_2183 [Shewanella frigidimarina NCIMB
400]
gi|114334647|gb|ABI72029.1| protein of unknown function DUF28 [Shewanella frigidimarina NCIMB
400]
Length = 250
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ LFT ++L +A +E GG+D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAARE-GGSDVDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|158520388|ref|YP_001528258.1| hypothetical protein Dole_0371 [Desulfococcus oleovorans Hxd3]
gi|226705841|sp|A8ZT17.1|Y371_DESOH RecName: Full=Probable transcriptional regulatory protein Dole_0371
gi|158509214|gb|ABW66181.1| protein of unknown function DUF28 [Desulfococcus oleovorans Hxd3]
Length = 246
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW +I+H K A D ++ +FT L K++ LA + GGG DP+ N RL + I K +
Sbjct: 2 SGHNKWSSIKHKKGAADAKRGKVFTKLIKEITLAARTGGG-DPDGNPRLRTAIAAAKDEN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP IE AIK N EN Y GY
Sbjct: 61 MPKDNIERAIKKGTGDLEGVNYEENTYEGY 90
>gi|32473740|ref|NP_866734.1| hypothetical protein RB5500 [Rhodopirellula baltica SH 1]
gi|440717972|ref|ZP_20898442.1| protein containing DUF28 [Rhodopirellula baltica SWK14]
gi|49036528|sp|Q7URR4.1|Y5500_RHOBA RecName: Full=Probable transcriptional regulatory protein RB5500
gi|32444276|emb|CAD74274.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
gi|436436854|gb|ELP30550.1| protein containing DUF28 [Rhodopirellula baltica SWK14]
Length = 246
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K D ++ +++ LSK + ++ K GGG DP+ N RL ID K S
Sbjct: 2 AGHSKWANIQHRKGRVDAQRGKMWSKLSKAIIVSAKMGGG-DPSLNIRLRKAIDDAKAVS 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|333897269|ref|YP_004471143.1| hypothetical protein Thexy_1438 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112534|gb|AEF17471.1| UPF0082 protein yeeN [Thermoanaerobacterium xylanolyticum LX-11]
Length = 244
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K D +K +FT L+K + +A KEGG DP TN +L I+ K ++
Sbjct: 2 SGHSKWANIKHKKEKMDAQKGKIFTKLTKDIIMAAKEGG--DPETNSKLRDAIEKAKANN 59
Query: 88 MPMTTIENAIK 98
+P I+ AIK
Sbjct: 60 LPNENIQRAIK 70
>gi|427394087|ref|ZP_18887589.1| YebC/PmpR family DNA-binding regulatory protein [Alloiococcus
otitis ATCC 51267]
gi|425730187|gb|EKU93028.1| YebC/PmpR family DNA-binding regulatory protein [Alloiococcus
otitis ATCC 51267]
Length = 239
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K A+D++++ F SK++ A K+ GG DP N L ID K +
Sbjct: 2 AGHSKWNNIKQRKGAQDKKRSKQFQKYSKEIYKAAKD-GGPDPEMNASLRMAIDKAKSGN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPT 120
MP I+ AIK P Y E+S + P
Sbjct: 61 MPNDNIDRAIKRATDPNEGANYDEVSYEGYGPN 93
>gi|406998005|gb|EKE15976.1| hypothetical protein ACD_11C00057G0001 [uncultured bacterium]
Length = 238
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A+D ++A +FT + + + +A +EGGG +P N +L ID +K +
Sbjct: 2 SGHNKWSGIKHRKGAQDTKRANVFTKMGRLISIAAREGGG-NPEANVKLKFAIDQARKFN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIEKAIK 71
>gi|375009688|ref|YP_004983321.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448238872|ref|YP_007402930.1| DNA-binding regulatory protein [Geobacillus sp. GHH01]
gi|359288537|gb|AEV20221.1| hypothetical protein GTCCBUS3UF5_29180 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445207714|gb|AGE23179.1| DNA-binding regulatory protein [Geobacillus sp. GHH01]
Length = 246
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP +N L I+ K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKSGGG-DPASNPSLRLVIEKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P +A +V CL +R
Sbjct: 61 MPSENIERAIKKATGTQEHTNYEEIRYEGYGPG-GVAVMV-----VCLTDNKNRTAANVR 114
Query: 148 ANFISN 153
A F N
Sbjct: 115 AAFSKN 120
>gi|257063438|ref|YP_003143110.1| hypothetical protein Shel_07020 [Slackia heliotrinireducens DSM
20476]
gi|256791091|gb|ACV21761.1| conserved hypothetical protein TIGR01033 [Slackia
heliotrinireducens DSM 20476]
Length = 267
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA+D +++ LF+ LS+ + +A KEGG +P N LA+ I+ K +S
Sbjct: 2 SGHSKWATTKHRKAAQDAKRSALFSKLSRNITVAAKEGGDPNPENNASLAAAIEKAKANS 61
Query: 88 MPMTTIENAI-KSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPP 146
+P I+ AI K+ ++ Y L+ + P G A L A++ R
Sbjct: 62 LPKDKIKTAIDKAFGTGKDAASYETLTYEGYGPA----------GVAILCQALTDNRNRT 111
Query: 147 SANFIS 152
+A+ S
Sbjct: 112 AADVGS 117
>gi|451970301|ref|ZP_21923528.1| hypothetical protein C408_0140 [Vibrio alginolyticus E0666]
gi|451933815|gb|EMD81482.1| hypothetical protein C408_0140 [Vibrio alginolyticus E0666]
Length = 248
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ +FT L +++ +A KEGGG +P N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIFTKLIREIVVAAKEGGG-EPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ A+
Sbjct: 61 MTRDTVNRAV 70
>gi|390934777|ref|YP_006392282.1| hypothetical protein Tsac_1677 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570278|gb|AFK86683.1| UPF0082 protein yeeN [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 244
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K D +K +FT L+K + +A KEGG DP TN +L I+ K ++
Sbjct: 2 SGHSKWANIKHKKEKMDAQKGKIFTKLTKDIIMAAKEGG--DPETNSKLRDAIEKAKANN 59
Query: 88 MPMTTIENAIK 98
+P I+ AIK
Sbjct: 60 LPNDNIQRAIK 70
>gi|289523152|ref|ZP_06440006.1| glucose-1-phosphate adenylyltransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503695|gb|EFD24859.1| glucose-1-phosphate adenylyltransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 250
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI++ KAA+D ++ LF L + + A +EGGG DP+ N L + I+ K+++
Sbjct: 2 SGHSKWANIKYRKAAQDSKRGKLFQKLVRAIITAAREGGG-DPSANVALKNAIEKAKEAN 60
Query: 88 MPMTTIENAIK 98
+PM I+ AIK
Sbjct: 61 VPMENIQKAIK 71
>gi|386346903|ref|YP_006045152.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339411870|gb|AEJ61435.1| UPF0082 protein yeeN [Spirochaeta thermophila DSM 6578]
Length = 246
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW IRH KAA D ++ +FT L K++ +A + GGG DP N RL + I K ++
Sbjct: 2 SGHSKWATIRHKKAAMDAKRGKVFTKLIKEISVAARTGGG-DPEANPRLRTAILKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP IE AIK Y E+ + P
Sbjct: 61 MPKENIERAIKKGTGELEGADYTEIVYEAYGP 92
>gi|297529243|ref|YP_003670518.1| hypothetical protein GC56T3_0898 [Geobacillus sp. C56-T3]
gi|297252495|gb|ADI25941.1| protein of unknown function DUF28 [Geobacillus sp. C56-T3]
Length = 246
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP +N L I+ K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKSGGG-DPASNPSLRLVIEKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P +A +V CL +R
Sbjct: 61 MPSENIERAIKKATGTQEHTNYEEIRYEGYGPG-GVAVMV-----VCLTDNKNRTAANVR 114
Query: 148 ANFISN 153
A F N
Sbjct: 115 AAFSKN 120
>gi|114330308|ref|YP_746530.1| hypothetical protein Neut_0281 [Nitrosomonas eutropha C91]
gi|122314646|sp|Q0AJA6.1|Y281_NITEC RecName: Full=Probable transcriptional regulatory protein Neut_0281
gi|114307322|gb|ABI58565.1| protein of unknown function DUF28 [Nitrosomonas eutropha C91]
Length = 241
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L K++ +A + GGG DP +N RL +D +
Sbjct: 2 AGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGG-DPGSNPRLRLAMDKAFGHN 60
Query: 88 MPMTTIENAIK-SCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPP 146
MP +E AIK C E + Y E+ + + G+A +V M+ R
Sbjct: 61 MPKDNVERAIKRGCGELEGV-NYEEIRYEGY----------GVSGAAVMVDCMTDNRTRT 109
Query: 147 SAN 149
A+
Sbjct: 110 VAD 112
>gi|323498743|ref|ZP_08103731.1| hypothetical protein VISI1226_19926 [Vibrio sinaloensis DSM
21326]
gi|323316210|gb|EGA69233.1| hypothetical protein VISI1226_19926 [Vibrio sinaloensis DSM
21326]
Length = 248
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ +FT L +++ +A KEGGG +P N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIFTKLIREIVVAAKEGGG-EPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ A+
Sbjct: 61 MTRDTVNRAV 70
>gi|262394696|ref|YP_003286550.1| hypothetical protein VEA_003925 [Vibrio sp. Ex25]
gi|262338290|gb|ACY52085.1| hypothetical protein VEA_003925 [Vibrio sp. Ex25]
Length = 248
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ +FT L +++ +A KEGGG +P N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIFTKLIREIVVAAKEGGG-EPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ A+
Sbjct: 61 MTRDTVNRAV 70
>gi|261418391|ref|YP_003252073.1| hypothetical protein GYMC61_0924 [Geobacillus sp. Y412MC61]
gi|319767650|ref|YP_004133151.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261374848|gb|ACX77591.1| protein of unknown function DUF28 [Geobacillus sp. Y412MC61]
gi|317112516|gb|ADU95008.1| protein of unknown function DUF28 [Geobacillus sp. Y412MC52]
Length = 246
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP +N L I+ K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKSGGG-DPASNPSLRLVIEKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P +A +V CL +R
Sbjct: 61 MPSENIERAIKKATGTQEHTNYEEIRYEGYGPG-GVAVMV-----VCLTDNKNRTAANVR 114
Query: 148 ANFISN 153
A F N
Sbjct: 115 AAFSKN 120
>gi|160880639|ref|YP_001559607.1| hypothetical protein Cphy_2507 [Clostridium phytofermentans ISDg]
gi|189039704|sp|A9KMB4.1|Y2507_CLOPH RecName: Full=Probable transcriptional regulatory protein Cphy_2507
gi|160429305|gb|ABX42868.1| protein of unknown function DUF28 [Clostridium phytofermentans
ISDg]
Length = 242
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT L +++ +AVKE GG DPN N +L + K ++
Sbjct: 2 SGHSKFANIKHKKEKNDATKGKIFTRLGREIAVAVKE-GGPDPNNNNKLKDIVAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ +IK N Y ++ + P+ G+A +V A++ + +
Sbjct: 61 MPNDTIDRSIKKAAGEGNAVNYEFVTYEGYGPS----------GTAIIVEALTDNKNRTA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|260779083|ref|ZP_05887975.1| hypothetical protein VIC_004490 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605247|gb|EEX31542.1| hypothetical protein VIC_004490 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 247
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ +FT L +++ +A KEGGG +P N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIFTKLIREIVVAAKEGGG-EPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ A+
Sbjct: 61 MTRDTVNRAV 70
>gi|307718819|ref|YP_003874351.1| hypothetical protein STHERM_c11330 [Spirochaeta thermophila DSM
6192]
gi|306532544|gb|ADN02078.1| hypothetical protein STHERM_c11330 [Spirochaeta thermophila DSM
6192]
Length = 246
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW IRH KAA D ++ +FT L K++ +A + GGG DP N RL + I K ++
Sbjct: 2 SGHSKWATIRHKKAAMDAKRGKVFTKLIKEISVAARTGGG-DPEANPRLRTAILKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP IE AIK Y E+ + P
Sbjct: 61 MPKENIERAIKKGTGELEGADYTEIVYEAYGP 92
>gi|241068641|ref|XP_002408495.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492483|gb|EEC02124.1| conserved hypothetical protein, partial [Ixodes scapularis]
Length = 251
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
+ AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + +
Sbjct: 7 INMAGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTSAR 66
Query: 85 KSSMPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
++P I+ AI S N N Y E+ + P G A +V A++
Sbjct: 67 SQNLPKERIDKAINSANDSSNTENYTEIRYEGYAPN----------GIAIIVEALT 112
>gi|91228186|ref|ZP_01262168.1| hypothetical protein V12G01_20563 [Vibrio alginolyticus 12G01]
gi|91188175|gb|EAS74476.1| hypothetical protein V12G01_20563 [Vibrio alginolyticus 12G01]
Length = 248
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ +FT L +++ +A KEGGG +P N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIFTKLIREIVVAAKEGGG-EPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ A+
Sbjct: 61 MTRDTVNRAV 70
>gi|269967683|ref|ZP_06181733.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827770|gb|EEZ82054.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 248
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ +FT L +++ +A KEGGG +P N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIFTKLIREIVVAAKEGGG-EPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ A+
Sbjct: 61 MTRDTVNRAV 70
>gi|304317020|ref|YP_003852165.1| hypothetical protein Tthe_1571 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778522|gb|ADL69081.1| protein of unknown function DUF28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 244
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K D +K +FT L+K + +A KEGG DP TN +L I+ K ++
Sbjct: 2 SGHSKWANIKHKKEKMDAQKGKIFTKLTKDIIMAAKEGG--DPETNSKLRDAIEKAKANN 59
Query: 88 MPMTTIENAIK 98
+P I+ AIK
Sbjct: 60 LPNDNIQRAIK 70
>gi|167746569|ref|ZP_02418696.1| hypothetical protein ANACAC_01279 [Anaerostipes caccae DSM 14662]
gi|167653529|gb|EDR97658.1| DNA-binding regulatory protein, YebC/PmpR family [Anaerostipes
caccae DSM 14662]
Length = 242
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D +K +FT L +++ +AVKEGG DP N RL + K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAKKGKIFTKLGREIAVAVKEGGA-DPENNSRLRDIVAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ +IK N Y ++ + P+ G A +V A++ + +
Sbjct: 61 MPNDTIDRSIKKAAGDANAVNYESITYEGYGPS----------GVAIIVEALTDNKNRTA 110
Query: 148 ANFIS 152
+N S
Sbjct: 111 SNVRS 115
>gi|433655167|ref|YP_007298875.1| DNA-binding regulatory protein, YebC/PmpR family
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293356|gb|AGB19178.1| DNA-binding regulatory protein, YebC/PmpR family
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 246
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K D +K +FT L+K + +A KEGG DP TN +L I+ K ++
Sbjct: 2 SGHSKWANIKHKKEKMDAQKGKIFTKLTKDIIMAAKEGG--DPETNSKLRDAIEKAKANN 59
Query: 88 MPMTTIENAIK 98
+P I+ AIK
Sbjct: 60 LPNDNIQRAIK 70
>gi|295695623|ref|YP_003588861.1| hypothetical protein [Kyrpidia tusciae DSM 2912]
gi|295411225|gb|ADG05717.1| protein of unknown function DUF28 [Kyrpidia tusciae DSM 2912]
Length = 247
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K +D + LFT +S+++ A ++ GG++P TNYRL + I+ + ++
Sbjct: 2 SGHSKWHNIQRRKGKQDAVRGQLFTKMSREIYAATRQ-GGSNPETNYRLKTAIERARAAN 60
Query: 88 MPMTTIENAIKSC 100
MPM +I+ I
Sbjct: 61 MPMDSIQRTIDKA 73
>gi|289548577|ref|YP_003473565.1| hypothetical protein Thal_0805 [Thermocrinis albus DSM 14484]
gi|289182194|gb|ADC89438.1| protein of unknown function DUF28 [Thermocrinis albus DSM 14484]
Length = 249
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS W I+H KA D ++ +F L +++ +AV+E GG +P TN RL S I+ K+ +
Sbjct: 2 AGHSHWAQIKHKKAKVDAQRGRIFNKLIREITVAVRE-GGPNPETNPRLRSAIENAKRFN 60
Query: 88 MPMTTIENAIK 98
MP TIE AIK
Sbjct: 61 MPWETIERAIK 71
>gi|284044632|ref|YP_003394972.1| hypothetical protein Cwoe_3178 [Conexibacter woesei DSM 14684]
gi|283948853|gb|ADB51597.1| protein of unknown function DUF28 [Conexibacter woesei DSM 14684]
Length = 249
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+H KA D + FT L++ + +A +EGGG DP N LA+ + K +S
Sbjct: 2 AGHSKWAGIKHKKAIVDARRGAAFTKLARAITVAAREGGG-DPELNATLANAVQKAKDAS 60
Query: 88 MPMTTIENAI 97
MP IE AI
Sbjct: 61 MPKDNIERAI 70
>gi|300856550|ref|YP_003781534.1| hypothetical protein CLJU_c33870 [Clostridium ljungdahlii DSM
13528]
gi|300436665|gb|ADK16432.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 246
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++ +FT + K+L +A KE GG++P++N +L I K ++
Sbjct: 2 SGHSKWHNIQAKKGKADAKRGKIFTKIGKELAIAAKE-GGSNPDSNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP T++ AIK + Y E+S + P+ G A +V A++ + +
Sbjct: 61 MPQDTVQRAIKKGSGELTGVNYEEISYEGYGPS----------GVAMIVKALTDNKNRSA 110
Query: 148 AN 149
+N
Sbjct: 111 SN 112
>gi|114762980|ref|ZP_01442410.1| hypothetical protein 1100011001344_R2601_20911 [Pelagibaca
bermudensis HTCC2601]
gi|114544304|gb|EAU47312.1| hypothetical protein R2601_20911 [Pelagibaca bermudensis HTCC2601]
Length = 246
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +A LF+ SK++ +A K G DP+ N RL I K S
Sbjct: 2 AGHSKWANIQHRKGRQDAVRAKLFSKFSKEITVAAKM-GDPDPDKNPRLRLAIKEAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + E Y E+ + P G A +V AM+ R +
Sbjct: 61 MPKDNIERAIKKASGGEG-DDYEEIRYEGYGPN----------GVAVIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|50286329|ref|XP_445593.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524898|emb|CAG58504.1| unnamed protein product [Candida glabrata]
Length = 290
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
V +GH+KW I+H KA D EK L + ++ +AVK GG DP N RL S ID
Sbjct: 31 VMLSGHNKWSTIKHDKAKNDAEKNKLINKFASQVTIAVKSGGSGDPAMNIRLQSAIDLAF 90
Query: 85 KSSMPMTTIENAI 97
K+++P IE AI
Sbjct: 91 KNNVPKKVIEGAI 103
>gi|302391485|ref|YP_003827305.1| hypothetical protein [Acetohalobium arabaticum DSM 5501]
gi|302203562|gb|ADL12240.1| protein of unknown function DUF28 [Acetohalobium arabaticum DSM
5501]
Length = 254
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ +A LF+ LSK++ + +EGGG DP N L I K ++
Sbjct: 2 AGHSKWANIKHQKKKEDRRRAKLFSKLSKRIAVEAREGGG-DPEKNPDLRMAIQKAKDNN 60
Query: 88 MPMTTIENAI 97
MP I+ AI
Sbjct: 61 MPKDNIQRAI 70
>gi|433462670|ref|ZP_20420246.1| hypothetical protein D479_13777 [Halobacillus sp. BAB-2008]
gi|432188539|gb|ELK45723.1| hypothetical protein D479_13777 [Halobacillus sp. BAB-2008]
Length = 250
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LF L++++ +A K+GGG DP TN L +D + ++
Sbjct: 2 AGHSKWSNIKHRKGAQDAKRGKLFMKLAREIFMAAKQGGG-DPETNPPLRLAMDKARANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP ++ AIK + Y E + + P
Sbjct: 61 MPKDNVDRAIKKATGDLDGVHYEEYTYEGYGP 92
>gi|379713776|ref|YP_005302114.1| hypothetical protein RMB_04325 [Rickettsia massiliae str. AZT80]
gi|376334422|gb|AFB31654.1| hypothetical protein RMB_04325 [Rickettsia massiliae str. AZT80]
Length = 253
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNIPENNPRLRNALTTARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S N NI Y E+ + P G A +V A++
Sbjct: 62 LPKERIDKAINSANDSSNIENYTEIRYEGYAPN----------GIAIIVEALT 104
>gi|226941264|ref|YP_002796338.1| hypothetical protein LHK_02347 [Laribacter hongkongensis HLHK9]
gi|254801302|sp|C1DAZ0.1|Y2347_LARHH RecName: Full=Probable transcriptional regulatory protein
LHK_02347
gi|226716191|gb|ACO75329.1| DUF28 domain containing protein [Laribacter hongkongensis HLHK9]
Length = 241
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ +A K GG D +N RL +D K S
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKIFTRLIKEITVAAKM-GGADLGSNPRLRLAVDKAKAES 60
Query: 88 MPMTTIENAIK 98
MP IENAIK
Sbjct: 61 MPKDNIENAIK 71
>gi|397689746|ref|YP_006527000.1| Transcriptional regulator [Melioribacter roseus P3M]
gi|395811238|gb|AFN73987.1| Transcriptional regulator [Melioribacter roseus P3M]
Length = 243
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA D ++ LFT L K++ +A ++GGG DP N RL ID K ++
Sbjct: 2 SGHSKWATIKRKKAALDAKRGKLFTKLIKEITIAARQGGG-DPEGNPRLRLAIDNAKAAN 60
Query: 88 MPMTTIENAIKSC 100
MP IE AIK
Sbjct: 61 MPADNIERAIKKA 73
>gi|86606896|ref|YP_475659.1| hypothetical protein CYA_2259 [Synechococcus sp. JA-3-3Ab]
gi|119391298|sp|Q2JSH9.1|Y2259_SYNJA RecName: Full=Probable transcriptional regulatory protein
CYA_2259
gi|86555438|gb|ABD00396.1| conserved hypothetical protein TIGR01033 [Synechococcus sp.
JA-3-3Ab]
Length = 249
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +K +LFT LS+ + +A + G DP+ N+RL S ++ K +
Sbjct: 2 AGHSKWANIKRQKARVDAKKGSLFTKLSRAIIVAAR-NGLPDPDANFRLRSAVEKAKAAG 60
Query: 88 MPMTTIENAI 97
MP TIE AI
Sbjct: 61 MPAETIERAI 70
>gi|149191828|ref|ZP_01870065.1| hypothetical protein VSAK1_00370 [Vibrio shilonii AK1]
gi|148834346|gb|EDL51346.1| hypothetical protein VSAK1_00370 [Vibrio shilonii AK1]
Length = 248
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ +FT L +++ +A KEGGG +P N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIFTKLIREIVVAAKEGGG-EPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ A+
Sbjct: 61 MTRDTVNRAV 70
>gi|385808901|ref|YP_005845297.1| hypothetical protein IALB_0317 [Ignavibacterium album JCM 16511]
gi|383800949|gb|AFH48029.1| Hypothetical protein IALB_0317 [Ignavibacterium album JCM 16511]
Length = 245
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA D +K +FT L K++ +A ++GGG DP N RL ID K +
Sbjct: 2 SGHSKWATIKRKKAALDAKKGKIFTKLIKEITIAARQGGG-DPAGNPRLRLAIDNAKSEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP IE AIK Y EL+ + P +A LV +
Sbjct: 61 MPAENIERAIKKATGELEGVTYHELTYEGYGPA-GVAMLVEV 101
>gi|374850298|dbj|BAL53290.1| hypothetical conserved protein [uncultured Aquificae bacterium]
Length = 249
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS W I+H KA D ++ LF+ + +++ +AV+E GG +P TN RL + I+ ++ +
Sbjct: 2 AGHSHWAQIKHKKAKVDAQRGKLFSKIIREITVAVRE-GGPNPETNSRLRTAIENARRVN 60
Query: 88 MPMTTIENAIK 98
MP TIE AIK
Sbjct: 61 MPAETIERAIK 71
>gi|50553202|ref|XP_504011.1| YALI0E16214p [Yarrowia lipolytica]
gi|49649880|emb|CAG79604.1| YALI0E16214p [Yarrowia lipolytica CLIB122]
Length = 291
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 29 GHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSSM 88
GHSKWQNIRH KA +D K L T ++ A K GG DP N RLA+ ID K ++
Sbjct: 23 GHSKWQNIRHTKAKQDAIKGNLATKFGNQIATAAKMGGA-DPAGNIRLATIIDAAKSYNV 81
Query: 89 PMTTIENAIK 98
P TI+ AI+
Sbjct: 82 PKKTIDAAIR 91
>gi|114566959|ref|YP_754113.1| hypothetical protein Swol_1435 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318038|sp|Q0AX12.1|Y1435_SYNWW RecName: Full=Probable transcriptional regulatory protein Swol_1435
gi|114337894|gb|ABI68742.1| protein of unknown function DUF28 [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 251
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D+++ FT ++K++ +AV+ GG DP N +L I K +
Sbjct: 2 AGHSKWANIKHKKARSDEKRGKEFTKIAKEITIAVRSGGSGDPEANSKLKLAIQKAKAIN 61
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP I A+K S + E IY GY
Sbjct: 62 MPNENINRAVKKGTGEIDSETIEEIIYEGY 91
>gi|449126239|ref|ZP_21762532.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola OTK]
gi|448938431|gb|EMB19362.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola OTK]
Length = 247
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT K++ +A K GGG DP TN RL + + + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKFIKEISIAAKMGGG-DPATNPRLRTAVLKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP IE AIK Y EL + P +A LV +
Sbjct: 61 MPKDNIERAIKKGTGELGAVNYEELLYEGYGPG-GVAVLVEV 101
>gi|288817493|ref|YP_003431840.1| hypothetical protein HTH_0172 [Hydrogenobacter thermophilus TK-6]
gi|384128263|ref|YP_005510876.1| hypothetical protein [Hydrogenobacter thermophilus TK-6]
gi|288786892|dbj|BAI68639.1| hypothetical protein HTH_0172 [Hydrogenobacter thermophilus TK-6]
gi|308751100|gb|ADO44583.1| protein of unknown function DUF28 [Hydrogenobacter thermophilus
TK-6]
Length = 249
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS W I+H KA D ++ LF+ + +++ +AV+E GG +P TN RL + I+ ++ +
Sbjct: 2 AGHSHWAQIKHKKAKVDAQRGKLFSKIIREITVAVRE-GGPNPETNSRLRTAIENARRVN 60
Query: 88 MPMTTIENAIK 98
MP TIE AIK
Sbjct: 61 MPAETIERAIK 71
>gi|297616925|ref|YP_003702084.1| hypothetical protein Slip_0739 [Syntrophothermus lipocalidus DSM
12680]
gi|297144762|gb|ADI01519.1| protein of unknown function DUF28 [Syntrophothermus lipocalidus
DSM 12680]
Length = 253
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KA D++K +FT ++K++ +A ++GGG DP+ N RL + I K +
Sbjct: 2 SGHSKWANIKHKKARSDEKKGKVFTKIAKEIIIAARDGGG-DPDNNPRLKALIQKAKGVN 60
Query: 88 MPMTTIENAIK 98
MP I AIK
Sbjct: 61 MPNENILRAIK 71
>gi|452975328|gb|EME75147.1| hypothetical protein BSONL12_09177 [Bacillus sonorensis L12]
Length = 240
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A +E GG DP +N L ID K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKIFMKLAKEIYVAARE-GGPDPESNASLRLVIDKAKNAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSR 141
MP I+ AIK ++ Y E++ + P +A +V CL +R
Sbjct: 61 MPNDNIDRAIKKAAGNQDGSNYEEITYEGYGPA-GVAVMVK-----CLTDNKNR 108
>gi|152985870|ref|YP_001349893.1| hypothetical protein PSPA7_4544 [Pseudomonas aeruginosa PA7]
gi|452879687|ref|ZP_21956764.1| hypothetical protein G039_25415 [Pseudomonas aeruginosa VRFPA01]
gi|167012955|sp|A6VA08.1|Y4544_PSEA7 RecName: Full=Probable transcriptional regulatory protein
PSPA7_4544
gi|150961028|gb|ABR83053.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|452183790|gb|EME10808.1| hypothetical protein G039_25415 [Pseudomonas aeruginosa VRFPA01]
Length = 248
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +K +FT L ++L +A K+GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKKGKIFTKLIRELTVAAKQGGGV-PADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ AI + +ELS + P+ G A +V AM+ R
Sbjct: 61 MTRDTIDRAIARGVGSNDADNMVELSYEGYAPS----------GVAIIVEAMTDNR 106
>gi|42526995|ref|NP_972093.1| hypothetical protein TDE1487 [Treponema denticola ATCC 35405]
gi|422341989|ref|ZP_16422929.1| hypothetical protein HMPREF9353_01595 [Treponema denticola F0402]
gi|449102659|ref|ZP_21739407.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola AL-2]
gi|449107345|ref|ZP_21744001.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola ASLM]
gi|449109440|ref|ZP_21746074.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola ATCC 33520]
gi|449111952|ref|ZP_21748507.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola ATCC 33521]
gi|449113244|ref|ZP_21749759.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola ATCC 35404]
gi|449115833|ref|ZP_21752293.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola H-22]
gi|449120114|ref|ZP_21756500.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola H1-T]
gi|449122519|ref|ZP_21758852.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola MYR-T]
gi|449131250|ref|ZP_21767466.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola SP37]
gi|451969040|ref|ZP_21922269.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola US-Trep]
gi|49036513|sp|P62042.1|Y1487_TREDE RecName: Full=Probable transcriptional regulatory protein TDE_1487
gi|41817419|gb|AAS12004.1| conserved hypothetical protein TIGR01033 [Treponema denticola ATCC
35405]
gi|325474057|gb|EGC77245.1| hypothetical protein HMPREF9353_01595 [Treponema denticola F0402]
gi|448940083|gb|EMB20994.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola SP37]
gi|448947509|gb|EMB28353.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola MYR-T]
gi|448948258|gb|EMB29095.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola H1-T]
gi|448955319|gb|EMB36086.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola H-22]
gi|448956233|gb|EMB36994.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola ATCC 33521]
gi|448958683|gb|EMB39411.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola ATCC 33520]
gi|448960824|gb|EMB41533.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola ATCC 35404]
gi|448962590|gb|EMB43278.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola ASLM]
gi|448966248|gb|EMB46906.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola AL-2]
gi|451702212|gb|EMD56641.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola US-Trep]
Length = 247
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT K++ +A K GGG DP TN RL + + + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKFIKEISIAAKMGGG-DPATNPRLRTAVLKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP IE AIK Y EL + P +A LV +
Sbjct: 61 MPKDNIERAIKKGTGELGAVNYEELLYEGYGPG-GVAVLVEV 101
>gi|118581084|ref|YP_902334.1| hypothetical protein Ppro_2673 [Pelobacter propionicus DSM 2379]
gi|166228423|sp|A1ASF6.1|Y2673_PELPD RecName: Full=Probable transcriptional regulatory protein Ppro_2673
gi|118503794|gb|ABL00277.1| protein of unknown function DUF28 [Pelobacter propionicus DSM 2379]
Length = 247
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ +FT L K++ +A K GGG DP N RL + +D K +
Sbjct: 2 SGHNKWSTIKHKKGAADAKRGKVFTKLIKEISVAAKLGGG-DPAANPRLRTAVDKAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK Y E+ + P G+A LV M+ R
Sbjct: 61 MPKDNIERAIKKGAGGMEGVTYEEIVYEGYGPG----------GAAVLVEVMTDNR 106
>gi|194333339|ref|YP_002015199.1| hypothetical protein Paes_0496 [Prosthecochloris aestuarii DSM
271]
gi|226707642|sp|B4S5F5.1|Y496_PROA2 RecName: Full=Probable transcriptional regulatory protein
Paes_0496
gi|194311157|gb|ACF45552.1| protein of unknown function DUF28 [Prosthecochloris aestuarii DSM
271]
Length = 250
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ LFT L +++ +A K GGG DP+ N RL +D + +S
Sbjct: 2 SGHSKWSTIKRKKAATDQKRGNLFTKLVREITIAAKMGGG-DPSGNPRLRLALDNARANS 60
Query: 88 MPMTTIENAIK 98
MP I+ AIK
Sbjct: 61 MPQENIQRAIK 71
>gi|226481309|emb|CAX73552.1| Coiled-coil domain-containing protein 44 [Schistosoma japonicum]
Length = 291
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCK 84
RYAGH+ WQN++HIK A D+EK+ K ++ A+++GGG DP N LA+ + K
Sbjct: 44 RYAGHAHWQNVKHIKEAGDREKSKNSLYYIKAVQKAIRDGGGIRDPKVNLTLAAVLAEAK 103
Query: 85 KSSMPMTTIENAIKSCN 101
S+P +T+E + + N
Sbjct: 104 SKSIPFSTLEKQLNADN 120
>gi|383482288|ref|YP_005391202.1| hypothetical protein MCI_00910 [Rickettsia montanensis str. OSU
85-930]
gi|378934642|gb|AFC73143.1| hypothetical protein MCI_00910 [Rickettsia montanensis str. OSU
85-930]
Length = 253
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S N N Y E+ + P G A +V A++
Sbjct: 62 LPKERIDKAINSANDSSNTENYTEIRYEGYAPN----------GIAIIVEALT 104
>gi|218288868|ref|ZP_03493119.1| protein of unknown function DUF28 [Alicyclobacillus acidocaldarius
LAA1]
gi|218240957|gb|EED08134.1| protein of unknown function DUF28 [Alicyclobacillus acidocaldarius
LAA1]
Length = 247
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K +D + LFT LSK + A +EGGG +P TN+RL I+ + ++
Sbjct: 2 AGHSKWHNIQRRKGKQDAIRGQLFTKLSKDIYQAAREGGG-NPETNFRLRVAIERARANN 60
Query: 88 MPMTTIENAIKSC 100
+PM I+ I
Sbjct: 61 LPMENIQRTIAKA 73
>gi|365834447|ref|ZP_09375893.1| DNA-binding regulatory protein, YebC/PmpR family [Hafnia alvei
ATCC 51873]
gi|364569224|gb|EHM46847.1| DNA-binding regulatory protein, YebC/PmpR family [Hafnia alvei
ATCC 51873]
Length = 272
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 3 LLGRPLGVYKVHRLIPDEGYLLVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAV 62
L G ++K RL+P++ AGHSKW N +H KAA+D ++ +FT + ++L A
Sbjct: 6 LTGVKFVIFKALRLLPEK-----HMAGHSKWANTKHRKAAQDSKRGKIFTKIIRELVTAA 60
Query: 63 KEGGGTDPNTNYRLASTIDYCKKSSMPMTTIENAI 97
K GGG DP N RL + ID ++M T+ AI
Sbjct: 61 KLGGG-DPGANPRLRAAIDKALSNNMTRDTLNRAI 94
>gi|20807595|ref|NP_622766.1| hypothetical protein TTE1135 [Thermoanaerobacter tengcongensis
MB4]
gi|20516134|gb|AAM24370.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 245
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K D +K +FT L+K + A KEGGG DP TN +L I+ K +
Sbjct: 4 AGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGG-DPETNSKLKLAIERAKAFN 62
Query: 88 MPMTTIENAIK 98
+P I+ AIK
Sbjct: 63 LPSENIQRAIK 73
>gi|56757129|gb|AAW26736.1| SJCHGC02343 protein [Schistosoma japonicum]
Length = 291
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCK 84
RYAGH+ WQN++HIK A D+EK+ K ++ A+++GGG DP N LA+ + K
Sbjct: 44 RYAGHAHWQNVKHIKEAGDREKSKNSLYYIKAVQKAIRDGGGIRDPKVNLTLAAVLAEAK 103
Query: 85 KSSMPMTTIENAIKSCN 101
S+P +T+E + + N
Sbjct: 104 SKSIPFSTLEKQLNADN 120
>gi|449128583|ref|ZP_21764829.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola SP33]
gi|448940991|gb|EMB21895.1| YebC/PmpR family DNA-binding regulatory protein [Treponema
denticola SP33]
Length = 247
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT K++ +A K GGG DP TN RL + + + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKFIKEISIAAKMGGG-DPATNPRLRTAVLKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP IE AIK Y EL + P +A LV +
Sbjct: 61 MPKDNIERAIKKGTGELGAVNYEELLYEGYGPG-GVAVLVEV 101
>gi|33517052|sp|Q8RAR7.2|Y1135_THETN RecName: Full=Probable transcriptional regulatory protein TTE1135
Length = 243
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K D +K +FT L+K + A KEGGG DP TN +L I+ K +
Sbjct: 2 AGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGG-DPETNSKLKLAIERAKAFN 60
Query: 88 MPMTTIENAIK 98
+P I+ AIK
Sbjct: 61 LPSENIQRAIK 71
>gi|226226041|ref|YP_002760147.1| hypothetical protein GAU_0635 [Gemmatimonas aurantiaca T-27]
gi|259647100|sp|C1A617.1|Y635_GEMAT RecName: Full=Probable transcriptional regulatory protein GAU_0635
gi|226089232|dbj|BAH37677.1| hypothetical protein GAU_0635 [Gemmatimonas aurantiaca T-27]
Length = 247
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+ I+ KAA D ++ LFT L +++ +A K GGG D N RL + ID K S
Sbjct: 2 AGHSKWKTIKRAKAATDNKRGALFTRLIREITMAAKLGGG-DAGGNPRLRTAIDNAKAVS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ AIK Y+E+ + P
Sbjct: 61 MPKDNIDRAIKKGTGELEGVDYVEVLYEAYGP 92
>gi|402703476|ref|ZP_10851455.1| hypothetical protein RhelC_04365 [Rickettsia helvetica C9P9]
Length = 253
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S N N Y E+ + P G A +V A++
Sbjct: 62 LPKERIDKAINSANDSSNTENYTEIRYEGYAPN----------GIAIIVEALT 104
>gi|258512081|ref|YP_003185515.1| hypothetical protein Aaci_2117 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478807|gb|ACV59126.1| protein of unknown function DUF28 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 247
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K +D + LFT LSK + A +EGGG +P TN+RL I+ + ++
Sbjct: 2 AGHSKWHNIQRRKGKQDAIRGQLFTKLSKDIYQAAREGGG-NPETNFRLRVAIERARANN 60
Query: 88 MPMTTIENAIKSC 100
+PM I+ I
Sbjct: 61 LPMENIQRTIAKA 73
>gi|384135947|ref|YP_005518661.1| hypothetical protein TC41_2236 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290032|gb|AEJ44142.1| protein of unknown function DUF28 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 249
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K +D + LFT LSK + A +EGGG +P TN+RL I+ + ++
Sbjct: 4 AGHSKWHNIQRRKGKQDAIRGQLFTKLSKDIYQAAREGGG-NPETNFRLRVAIERARANN 62
Query: 88 MPMTTIENAIKSC 100
+PM I+ I
Sbjct: 63 LPMENIQRTIAKA 75
>gi|218133601|ref|ZP_03462405.1| hypothetical protein BACPEC_01470 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990976|gb|EEC56982.1| DNA-binding regulatory protein, YebC/PmpR family [[Bacteroides]
pectinophilus ATCC 43243]
Length = 248
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI H KAA D K +FT + K++ +AVKE GG D N N +L + + K ++
Sbjct: 2 SGHSKFANIAHKKAANDAAKGKIFTRIGKEIMVAVKE-GGPDVNNNSKLRTVVAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE AIK + Y + + P+ GSA +V A++ R +
Sbjct: 61 MPNDTIERAIKKA-AGSDASNYESVVYEGYGPS----------GSAIIVEALTDNRNRAA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNIRS 114
>gi|344342826|ref|ZP_08773696.1| UPF0082 protein yeeN [Marichromatium purpuratum 984]
gi|343805378|gb|EGV23274.1| UPF0082 protein yeeN [Marichromatium purpuratum 984]
Length = 249
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D+ + ++T L +++ +A + GGG DP N RL +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDKRRGKIWTKLIREVTVAARAGGG-DPAANPRLRLAMDKAFGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP T+E AIK Y E+ + P G A +V MS R
Sbjct: 61 MPRDTVERAIKRGAGGTEGDNYEEIRYEGYGPG----------GVAVMVDCMSDNR 106
>gi|154483677|ref|ZP_02026125.1| hypothetical protein EUBVEN_01381 [Eubacterium ventriosum ATCC
27560]
gi|149735587|gb|EDM51473.1| DNA-binding regulatory protein, YebC/PmpR family [Eubacterium
ventriosum ATCC 27560]
Length = 242
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + K++ +AVKE GG DPN N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKMFTIIGKEIAVAVKE-GGADPNNNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK + Y + + P G A +V A++ R +
Sbjct: 61 MPNDTIERGIKKAAGNASAINYETVRYEGYGPN----------GIAIIVDALTDNRNRTA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|333983198|ref|YP_004512408.1| hypothetical protein [Methylomonas methanica MC09]
gi|333807239|gb|AEF99908.1| UPF0082 protein yeeN [Methylomonas methanica MC09]
Length = 251
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT + +++ +A K GG DP+ N L + ID ++
Sbjct: 2 AGHSKWANIKHRKGAQDAKRGKIFTKMIREITVAAKGAGGGDPSNNPSLRTAIDKALGAN 61
Query: 88 MPMTTIENAIKSC 100
M TI+N IK
Sbjct: 62 MKRDTIDNTIKKA 74
>gi|239946877|ref|ZP_04698630.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921153|gb|EER21177.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 253
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTSARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S N N Y E+ + P G A +V A++
Sbjct: 62 LPKERIDKAINSANDSSNTENYTEIRYEGYAPN----------GIAIIVEALT 104
>gi|239827861|ref|YP_002950485.1| hypothetical protein GWCH70_2524 [Geobacillus sp. WCH70]
gi|259646866|sp|C5D5F1.1|Y2524_GEOSW RecName: Full=Probable transcriptional regulatory protein
GWCH70_2524
gi|239808154|gb|ACS25219.1| protein of unknown function DUF28 [Geobacillus sp. WCH70]
Length = 246
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP +N L I+ K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKTGGG-DPASNPALRLVIEKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P +V L + ++ RV F +
Sbjct: 61 MPNENIERAIKKATGTQEHTNYEEVRYEGYGPGGVAVMVVCLTDNKNRTASNVRVAFSKN 120
Query: 148 A---------NFISNRLGLFL 159
+++ +R GL +
Sbjct: 121 GGNLGETGCVSYLFDRKGLLV 141
>gi|260438339|ref|ZP_05792155.1| glucose-1-phosphate adenylyltransferase [Butyrivibrio crossotus DSM
2876]
gi|292808926|gb|EFF68131.1| glucose-1-phosphate adenylyltransferase [Butyrivibrio crossotus DSM
2876]
Length = 247
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT L K+L +AVKE GG DPN N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTRLGKELMVAVKE-GGPDPNNNSKLRDVIAKAKSNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ +IK N + ++ + P G+A +V ++ + +
Sbjct: 61 MPNDTIDRSIKKAAGDANAANFTAITYEGYGPN----------GTAIIVETLTDNKNRTA 110
Query: 148 AN 149
+N
Sbjct: 111 SN 112
>gi|333994755|ref|YP_004527368.1| hypothetical protein TREAZ_0472 [Treponema azotonutricium ZAS-9]
gi|333735165|gb|AEF81114.1| conserved hypothetical protein [Treponema azotonutricium ZAS-9]
Length = 246
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT L K++ +A + GGG DPN N RL + I + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQMFTKLIKEITIAARMGGG-DPNGNPRLRTAILKARGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELS 113
MP I NAIK Y EL+
Sbjct: 61 MPKDNITNAIKKGTGELEGVSYEELT 86
>gi|153875113|ref|ZP_02003050.1| protein containing DUF28 [Beggiatoa sp. PS]
gi|152068422|gb|EDN66949.1| protein containing DUF28 [Beggiatoa sp. PS]
Length = 248
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ ++ + GGG + +N RL + ID S+
Sbjct: 2 AGHSKWANIQHRKGAQDAKRGKLFTKLIREITISARMGGG-EAASNPRLRAAIDNALVSN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TIE AIK ++ Y E++ + P G A +V M+ R
Sbjct: 61 MTKDTIERAIKRGAGTQDAENYEEITYEGYGPG----------GVAVMVDCMTDNR 106
>gi|421253061|ref|ZP_15708438.1| hypothetical protein AAUPMB_10230, partial [Pasteurella multocida
subsp. multocida str. Anand1_buffalo]
gi|401694895|gb|EJS88365.1| hypothetical protein AAUPMB_10230, partial [Pasteurella multocida
subsp. multocida str. Anand1_buffalo]
Length = 207
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVNANPRLRTAVDKALSSN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|374336320|ref|YP_005093007.1| hypothetical protein GU3_12510 [Oceanimonas sp. GK1]
gi|372986007|gb|AEY02257.1| hypothetical protein GU3_12510 [Oceanimonas sp. GK1]
Length = 246
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A +E GG+D +N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTTAARE-GGSDAASNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAIK 98
M T+E A+K
Sbjct: 61 MTRDTVERAVK 71
>gi|289209179|ref|YP_003461245.1| hypothetical protein TK90_2018 [Thioalkalivibrio sp. K90mix]
gi|288944810|gb|ADC72509.1| protein of unknown function DUF28 [Thioalkalivibrio sp. K90mix]
Length = 245
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ +A ++ GG+DP TN RL ID ++
Sbjct: 2 AGHSKWANIQHRKNAQDAKRGKLFTKLIREITVAARQ-GGSDPETNPRLRLAIDKALGAN 60
Query: 88 MPMTTIENAIK 98
M TIE A K
Sbjct: 61 MTRDTIERAAK 71
>gi|384083301|ref|ZP_09994476.1| hypothetical protein gproHI_08296 [gamma proteobacterium HIMB30]
Length = 247
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L +++ +A K GGG +P N RL + +D ++
Sbjct: 2 AGHSKWANIKHKKAAQDAKRGKIFTKLIREITVAAKMGGG-EPADNPRLRAAVDKALSAN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY 109
M TI+ AI + NV E +Y GY
Sbjct: 61 MTKDTIQRAIDRGAGGGDNDNVEELVYEGY 90
>gi|372279194|ref|ZP_09515230.1| hypothetical protein OS124_06048 [Oceanicola sp. S124]
Length = 246
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ LSK++ +A K G DP N RL + K SS
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKLSKEITVAAK-MGDPDPEKNPRLRMAVKEAKSSS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
+P I+ AIK E Y E+ + P G A +V AM+ R +
Sbjct: 61 VPKDVIDRAIKKSQAGEG-DDYEEIRYEGYGPN----------GVAVIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|374319430|ref|YP_005065929.1| hypothetical protein Rsl_901 [Rickettsia slovaca 13-B]
gi|383751423|ref|YP_005426524.1| hypothetical protein MC3_04360 [Rickettsia slovaca str. D-CWPP]
gi|360041979|gb|AEV92361.1| hypothetical protein Rsl_901 [Rickettsia slovaca 13-B]
gi|379774437|gb|AFD19793.1| hypothetical protein MC3_04360 [Rickettsia slovaca str. D-CWPP]
Length = 253
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV-SLEGSACLVSAMSRVRFPP 146
+P I+ AI S N N Y E+ + P IA +V +L + +A R F
Sbjct: 62 LPKERIDKAINSANDSSNNENYTEIRYEGYAPN-GIAIIVEALTDNKNRTAAEVRSSFTK 120
Query: 147 ---------SANFISNRLGLFLECSEPITRMKQASVLLAT--ALAHNVF 184
S N++ N G+ PI VL A A H++
Sbjct: 121 YGGSLGETGSVNYLFNHCGVI---QYPINIASNEDVLEAVIEAGGHDII 166
>gi|114321639|ref|YP_743322.1| hypothetical protein Mlg_2492 [Alkalilimnicola ehrlichii MLHE-1]
gi|114228033|gb|ABI57832.1| protein of unknown function DUF28 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 250
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT K++ +A + GG DP++N RL ID +
Sbjct: 6 AGHSKWSNIQHRKKAQDAKRGKIFTKHIKEITVAARM-GGPDPDSNPRLRLAIDRAFAQN 64
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP +E AIK + Y EL + P+ G+A +V M+ R
Sbjct: 65 MPKDNVERAIKRGAGLDESVEYEELRYEGYGPS----------GAALMVDCMTDNR 110
>gi|392403583|ref|YP_006440195.1| UPF0082 protein yeeN [Turneriella parva DSM 21527]
gi|390611537|gb|AFM12689.1| UPF0082 protein yeeN [Turneriella parva DSM 21527]
Length = 250
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+H K A D ++ +FT L+K++ +A K GGG D + N RL + +++S
Sbjct: 2 AGHSKWKNIQHRKGAADAKRGAMFTKLAKEIMVAAKLGGG-DESANPRLRTATLKARQNS 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|345870857|ref|ZP_08822807.1| UPF0082 protein yeeN [Thiorhodococcus drewsii AZ1]
gi|343921326|gb|EGV32047.1| UPF0082 protein yeeN [Thiorhodococcus drewsii AZ1]
Length = 249
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D+++ ++T L +++ +A +E GG DP N RL +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDKQRGKVWTKLIREVTVAAREAGG-DPAANPRLRLAMDKAFGAN 60
Query: 88 MPMTTIENAIK 98
MP T++ AIK
Sbjct: 61 MPRDTVDRAIK 71
>gi|253699569|ref|YP_003020758.1| hypothetical protein GM21_0933 [Geobacter sp. M21]
gi|259710172|sp|C6E1T1.1|Y933_GEOSM RecName: Full=Probable transcriptional regulatory protein GM21_0933
gi|251774419|gb|ACT17000.1| protein of unknown function DUF28 [Geobacter sp. M21]
Length = 247
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ +FT + K++ +A K GGG DP+ N RL + ID K +
Sbjct: 2 SGHNKWSTIKHKKGAADAKRGKIFTKIIKEITVAAKLGGG-DPDGNPRLRTAIDKAKGEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP +E AIK Y E + + P G+A LV M+ R
Sbjct: 61 MPKDNVERAIKKGVGGLEGTTYEETTYEGYGPG----------GTAVLVEVMTDNR---- 106
Query: 148 ANFISNRLGLFLECS 162
+S+ +F +C+
Sbjct: 107 NRTVSDVRSIFTKCN 121
>gi|6651175|gb|AAF22218.1|AF140575_3 unknown [Mycoplasma hyopneumoniae]
Length = 242
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D KA +F SK++ +AV + GG+DPN+N L I + S
Sbjct: 2 AGHSKWANIKHRKGAQDALKAKIFNKFSKEIMVAVAK-GGSDPNSNPALRLIISKARAKS 60
Query: 88 MPMTTIENAI 97
MP + IE AI
Sbjct: 61 MPKSNIEKAI 70
>gi|1799548|dbj|BAA09118.1| yrbC [Bacillus subtilis]
Length = 154
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L I+ K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGADPEANSALRLVIEKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 61 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 100
>gi|442805800|ref|YP_007373949.1| hypothetical protein Cst_c23790 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741650|gb|AGC69339.1| hypothetical protein Cst_c23790 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 242
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NIRH K D +K +FT L +++ +AVK GG DP TN RL I K ++
Sbjct: 2 SGHSKWANIRHKKEKTDAQKGKIFTKLGREIAMAVK-AGGPDPETNSRLKDAIAKAKANN 60
Query: 88 MPMTTIENAIKSC 100
MP I +IK
Sbjct: 61 MPNENIMRSIKKA 73
>gi|15619771|gb|AAL03219.1| unknown [Rickettsia conorii str. Malish 7]
Length = 295
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
+ AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + +
Sbjct: 41 INMAGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAAR 100
Query: 85 KSSMPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
++P I+ AI S N N Y E+ + P G A +V A++
Sbjct: 101 SQNLPKERIDKAINSANDSSNNENYTEIRYEGYAPN----------GIAIIVEALT 146
>gi|406920041|gb|EKD58175.1| hypothetical protein ACD_57C00009G0001, partial [uncultured
bacterium]
Length = 102
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHS + I K KD +K +F+ L++ + +AVK GGG DP++N++L ID K +
Sbjct: 2 SGHSHYATIHRQKELKDAKKGNVFSKLARAISIAVKAGGGPDPDSNFKLRMVIDKAKAQN 61
Query: 88 MPMTTIENAIKS 99
MP +E AI S
Sbjct: 62 MPKVNVERAIAS 73
>gi|385334633|ref|YP_005888580.1| hypothetical protein MHP168_484 [Mycoplasma hyopneumoniae 168]
gi|348161124|gb|ADQ90680.2| hypothetical protein MHP168_484 [Mycoplasma hyopneumoniae 168]
Length = 242
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D KA +F SK++ +AV + GG+DPN+N L I + S
Sbjct: 2 AGHSKWANIKHRKGAQDALKAKIFNKFSKEIMVAVAK-GGSDPNSNPALRLIISKARAKS 60
Query: 88 MPMTTIENAI 97
MP + IE AI
Sbjct: 61 MPKSNIEKAI 70
>gi|315924597|ref|ZP_07920816.1| glucose-1-phosphate adenylyltransferase [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622127|gb|EFV02089.1| glucose-1-phosphate adenylyltransferase [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 241
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K +D + +FT ++K + +A +EGGG DP N +L + K ++
Sbjct: 2 SGHSKWNNIKQRKGKQDAARGKVFTKMAKLIAVAAREGGG-DPEMNAKLREAVAKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ A+K + N Y E++ + P + + +L + +A R F +
Sbjct: 61 MPNDNIDRAVKKGSGELNDAIYEEITYEGYGPGGAAVIVQTLTDNKNRTAADVRHIFDKN 120
Query: 148 A---------NFISNRLG-LFLECSEPITRMKQASVLLATAL 179
F+ R G +F+E S+ I + L+ TAL
Sbjct: 121 GGNLGTNGCVGFLFERAGRIFVEQSDDIDEDE----LMMTAL 158
>gi|357404397|ref|YP_004916321.1| hypothetical protein MEALZ_1033 [Methylomicrobium alcaliphilum 20Z]
gi|351717062|emb|CCE22727.1| conserved hypothetical protein [Methylomicrobium alcaliphilum 20Z]
Length = 250
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT + +++ +A K GGG DP +N L + ID ++
Sbjct: 2 AGHSKWANIKHRKAGQDAKRGKIFTKMIREISVAAKAGGG-DPASNPTLRTAIDKALGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
M TI+N IK Y E+ + P
Sbjct: 61 MKRDTIDNTIKKATGALEAENYEEVRYEGYGP 92
>gi|320167284|gb|EFW44183.1| UPF0082 protein [Capsaspora owczarzaki ATCC 30864]
Length = 347
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+ I+H KAA D ++ L T S+++ V+E G DP N RL + ID +++
Sbjct: 97 AGHSKWKTIKHAKAATDAKRGKLITKFSREISSCVRE-SGEDPVFNPRLGAIIDRARQND 155
Query: 88 MPMTTIENAIK 98
+P+ I NAIK
Sbjct: 156 VPIDKIRNAIK 166
>gi|302670574|ref|YP_003830534.1| hypothetical protein bpr_I1213 [Butyrivibrio proteoclasticus B316]
gi|302395047|gb|ADL33952.1| hypothetical protein bpr_I1213 [Butyrivibrio proteoclasticus B316]
Length = 245
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + K++ +AVKE GG +P N++LA+ I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTIIGKEIAVAVKE-GGPNPANNFKLATVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK + + Y ++ + P G+A +V ++ + +
Sbjct: 61 MPNDTIERGIKKASGADGAVDYKSITYEGYGPG----------GTAIIVETLTDNQNRTA 110
Query: 148 ANFIS 152
AN S
Sbjct: 111 ANVKS 115
>gi|443632107|ref|ZP_21116287.1| hypothetical protein BSI_13580 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348222|gb|ELS62279.1| hypothetical protein BSI_13580 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 247
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L I+ K ++
Sbjct: 9 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGADPEANSALRLVIEKAKGAN 67
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 68 MPNENIDRAIKKAAGSQDGSSYEEITYEGYGPS-GIAVMVE 107
>gi|54020214|ref|YP_115982.1| hypothetical protein mhp472 [Mycoplasma hyopneumoniae 232]
gi|56405386|sp|Q9RGC3.2|Y472_MYCH2 RecName: Full=Probable transcriptional regulatory protein mhp472
gi|53987387|gb|AAV27588.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
Length = 242
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D KA +F SK++ +AV + GG+DPN+N L I + S
Sbjct: 2 AGHSKWANIKHRKGAQDALKAKIFNKFSKEIMVAVAK-GGSDPNSNPALRLIISKARAKS 60
Query: 88 MPMTTIENAI 97
MP + IE AI
Sbjct: 61 MPKSNIEKAI 70
>gi|386816224|ref|ZP_10103442.1| UPF0082 protein yeeN [Thiothrix nivea DSM 5205]
gi|386420800|gb|EIJ34635.1| UPF0082 protein yeeN [Thiothrix nivea DSM 5205]
Length = 249
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA D+++ ++T L +++ +A KEG +DPN + RL +D ++
Sbjct: 2 AGHSKWANIKHKKAAVDKKRGKIWTKLIREITVAAKEGKTSDPNAHPRLRLAVDKALGAN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP TI+ A K Y E+ + P
Sbjct: 62 MPKDTIDKACKRGAGETGAENYSEVRYEGYGP 93
>gi|119356375|ref|YP_911019.1| hypothetical protein Cpha266_0538 [Chlorobium phaeobacteroides
DSM 266]
gi|166227317|sp|A1BDW8.1|Y538_CHLPD RecName: Full=Probable transcriptional regulatory protein
Cpha266_0538
gi|119353724|gb|ABL64595.1| protein of unknown function DUF28 [Chlorobium phaeobacteroides
DSM 266]
Length = 250
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ LFT L K++ +A K GG DP N RL ID + +S
Sbjct: 2 SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGA-DPGGNPRLRLAIDTARSNS 60
Query: 88 MPMTTIENAIK 98
MPM I A+K
Sbjct: 61 MPMENILRAVK 71
>gi|336426918|ref|ZP_08606926.1| hypothetical protein HMPREF0994_02932 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010558|gb|EGN40541.1| hypothetical protein HMPREF0994_02932 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 242
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT L +++ +AVKE GG+DP+ N++LA I K ++
Sbjct: 2 SGHSKFANIKHKKERNDAAKGKIFTILGREIAVAVKE-GGSDPSNNFKLAQVIAKAKANN 60
Query: 88 MPMTTIENAIKSC 100
MP TI+ IK
Sbjct: 61 MPNDTIDRGIKKA 73
>gi|378773866|ref|YP_005176109.1| hypothetical protein Pmu_01880 [Pasteurella multocida 36950]
gi|356596414|gb|AET15140.1| hypothetical protein Pmu_01880 [Pasteurella multocida 36950]
Length = 246
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVNANPRLRTAVDKALSSN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|417850945|ref|ZP_12496757.1| hypothetical protein GEW_06079 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338220179|gb|EGP05728.1| hypothetical protein GEW_06079 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 241
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVNANPRLRTAVDKALSSN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|157803685|ref|YP_001492234.1| hypothetical protein A1E_02520 [Rickettsia canadensis str. McKiel]
gi|166228396|sp|A8EYL6.1|Y2520_RICCK RecName: Full=Probable transcriptional regulatory protein A1E_02520
gi|157784948|gb|ABV73449.1| hypothetical protein A1E_02520 [Rickettsia canadensis str. McKiel]
Length = 252
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI++ K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQYRKGAQDKKRAKIFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S N N Y+E+ + P+ G A +V A++
Sbjct: 62 LPKERIDKAINSANDASNTENYMEIRYEGYAPS----------GIAIIVEALT 104
>gi|421263722|ref|ZP_15714749.1| hypothetical protein KCU_05172 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401689171|gb|EJS84652.1| hypothetical protein KCU_05172 [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 246
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVNANPRLRTAVDKALSSN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|383312792|ref|YP_005365593.1| hypothetical protein MCE_05545 [Candidatus Rickettsia amblyommii
str. GAT-30V]
gi|378931452|gb|AFC69961.1| hypothetical protein MCE_05545 [Candidatus Rickettsia amblyommii
str. GAT-30V]
Length = 253
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+ +A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKEAQDKNRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S N N Y E+ + P G A +V A++
Sbjct: 62 LPKERIDKAINSANDSSNTENYTEIRYEGYAPN----------GIAIIVEALT 104
>gi|72080806|ref|YP_287864.1| hypothetical protein MHP7448_0474 [Mycoplasma hyopneumoniae 7448]
gi|119372134|sp|Q4A7P8.1|Y474_MYCH7 RecName: Full=Probable transcriptional regulatory protein
MHP7448_0474
gi|71913930|gb|AAZ53841.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
Length = 242
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D KA +F SK++ +AV + GG+DPN+N L I + S
Sbjct: 2 AGHSKWANIKHRKGAQDALKAKIFNKFSKEIMVAVAK-GGSDPNSNPALRLIISKARAKS 60
Query: 88 MPMTTIENAI 97
MP + IE AI
Sbjct: 61 MPKSNIEKAI 70
>gi|71893822|ref|YP_279268.1| hypothetical protein MHJ_0471 [Mycoplasma hyopneumoniae J]
gi|119372133|sp|Q4A9L4.1|Y471_MYCHJ RecName: Full=Probable transcriptional regulatory protein
MHJ_0471
gi|71851949|gb|AAZ44557.1| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
Length = 242
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D KA +F SK++ +AV + GG+DPN+N L I + S
Sbjct: 2 AGHSKWANIKHRKGAQDALKAKIFNKFSKEIMVAVAK-GGSDPNSNPALRLIISKARAKS 60
Query: 88 MPMTTIENAI 97
MP + IE AI
Sbjct: 61 MPKSNIEKAI 70
>gi|394989423|ref|ZP_10382256.1| hypothetical protein SCD_01842 [Sulfuricella denitrificans skB26]
gi|393790923|dbj|GAB71895.1| hypothetical protein SCD_01842 [Sulfuricella denitrificans skB26]
Length = 242
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA D ++ +FT L K++ +A K GGG D + N RL +D +++
Sbjct: 2 AGHSKWANIKHKKAATDAKRGKIFTRLIKEITVAAKMGGG-DISCNPRLRLAVDKAYENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSR 141
MP +E AIK Y EL + P +A +V CL +R
Sbjct: 61 MPKDNVERAIKRGTGDLEGVNYEELRYEGYGPA-GVAVMVE-----CLTDNKTR 108
>gi|335046098|ref|ZP_08539121.1| DNA-binding regulatory protein, YebC/PmpR family [Oribacterium sp.
oral taxon 108 str. F0425]
gi|363897532|ref|ZP_09324071.1| hypothetical protein HMPREF9624_00633 [Oribacterium sp. ACB7]
gi|333759884|gb|EGL37441.1| DNA-binding regulatory protein, YebC/PmpR family [Oribacterium sp.
oral taxon 108 str. F0425]
gi|361959029|gb|EHL12326.1| hypothetical protein HMPREF9624_00633 [Oribacterium sp. ACB7]
Length = 246
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NIR K D K +FT + +L LAVK+ GGTDPN+N +L I K ++
Sbjct: 2 SGHSKFSNIRAKKEKNDAAKGKIFTIIGHELALAVKQ-GGTDPNSNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSC 100
MP TI+N IK
Sbjct: 61 MPNDTIQNGIKKA 73
>gi|197119678|ref|YP_002140105.1| hypothetical protein Gbem_3313 [Geobacter bemidjiensis Bem]
gi|226703778|sp|B5EAH0.1|Y3313_GEOBB RecName: Full=Probable transcriptional regulatory protein Gbem_3313
gi|197089038|gb|ACH40309.1| protein of unknown function DUF28 [Geobacter bemidjiensis Bem]
Length = 247
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ +FT + K++ +A K GGG DP+ N RL + ID K +
Sbjct: 2 SGHNKWSTIKHKKGAADAKRGKVFTKIIKEITVAAKLGGG-DPDGNPRLRTAIDKAKGEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP +E AIK Y E + + P G+A LV M+ R
Sbjct: 61 MPKDNVERAIKKGVGGLEGTTYEETTYEGYGPG----------GTAVLVEVMTDNR---- 106
Query: 148 ANFISNRLGLFLECS 162
+S+ +F +C+
Sbjct: 107 NRTVSDVRSIFTKCN 121
>gi|15602845|ref|NP_245917.1| hypothetical protein PM0980 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|386833851|ref|YP_006239165.1| hypothetical protein [Pasteurella multocida subsp. multocida str.
3480]
gi|417853653|ref|ZP_12499010.1| hypothetical protein AAUPMG_06024 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|425063677|ref|ZP_18466802.1| hypothetical protein X73_01022 [Pasteurella multocida subsp.
gallicida X73]
gi|425065845|ref|ZP_18468965.1| hypothetical protein P1059_01119 [Pasteurella multocida subsp.
gallicida P1059]
gi|33517096|sp|Q9CM61.1|Y980_PASMU RecName: Full=Probable transcriptional regulatory protein PM0980
gi|12721306|gb|AAK03064.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|338219175|gb|EGP04868.1| hypothetical protein AAUPMG_06024 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|385200551|gb|AFI45406.1| hypothetical protein NT08PM_0251 [Pasteurella multocida subsp.
multocida str. 3480]
gi|404382231|gb|EJZ78692.1| hypothetical protein X73_01022 [Pasteurella multocida subsp.
gallicida X73]
gi|404383340|gb|EJZ79794.1| hypothetical protein P1059_01119 [Pasteurella multocida subsp.
gallicida P1059]
Length = 246
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVNANPRLRTAVDKALSSN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|367470987|ref|ZP_09470650.1| hypothetical protein PAI11_39910 [Patulibacter sp. I11]
gi|365813949|gb|EHN09184.1| hypothetical protein PAI11_39910 [Patulibacter sp. I11]
Length = 249
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+H KA D + LFT L++ + +A KEGGG DP N LA + K +S
Sbjct: 2 AGHSKWAGIKHKKAIVDSRRGKLFTKLARHITVAAKEGGG-DPVGNAALALAVQKAKDAS 60
Query: 88 MPMTTIENAI 97
MP I+ AI
Sbjct: 61 MPKDNIQRAI 70
>gi|91205383|ref|YP_537738.1| hypothetical protein RBE_0568 [Rickettsia bellii RML369-C]
gi|119369526|sp|Q1RJ15.1|Y568_RICBR RecName: Full=Probable transcriptional regulatory protein RBE_0568
gi|91068927|gb|ABE04649.1| unknown [Rickettsia bellii RML369-C]
Length = 253
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ AVK G T+P+ N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAVK-AGSTNPDNNPRLRTALATARSQN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
+P I+ AI S N N Y E+ + P
Sbjct: 61 LPKERIDKAINSANDSANNENYTEIRYEGYAP 92
>gi|379022867|ref|YP_005299528.1| hypothetical protein RCA_02365 [Rickettsia canadensis str. CA410]
gi|376323805|gb|AFB21046.1| hypothetical protein RCA_02365 [Rickettsia canadensis str. CA410]
Length = 252
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI++ K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQYRKGAQDKKRAKIFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S N N Y+E+ + P+ G A +V A++
Sbjct: 62 LPKERIDKAINSANDASNTENYMEIRYEGYAPS----------GIAIIVEALT 104
>gi|402820439|ref|ZP_10870006.1| hypothetical protein IMCC14465_12400 [alpha proteobacterium
IMCC14465]
gi|402511182|gb|EJW21444.1| hypothetical protein IMCC14465_12400 [alpha proteobacterium
IMCC14465]
Length = 252
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +F+ LSK++ +A K G DP++N RL + I+ + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFSRLSKEITIAAKM-GMPDPDSNPRLRTAINAARAQN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|229586849|ref|YP_002845350.1| hypothetical protein RAF_ORF0717 [Rickettsia africae ESF-5]
gi|259647113|sp|C3PNU7.1|Y717_RICAE RecName: Full=Probable transcriptional regulatory protein
RAF_ORF0717
gi|228021899|gb|ACP53607.1| Unknown [Rickettsia africae ESF-5]
Length = 253
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS-LEGSACLVSAMSRVRFPP 146
+P I+ AI S N N Y E+ + P IA +V L + +A R F
Sbjct: 62 LPKERIDKAINSANDSSNNENYTEIRYEGYAPN-GIAIIVEVLTDNKNRTAAEVRSSFTK 120
Query: 147 ---------SANFISNRLGLFLECSEPITRMKQASVLLAT--ALAHNVF 184
S N++ N G+ PI VL A A H++
Sbjct: 121 YGGSLGETGSVNYLFNHCGVI---QYPINIASNEDVLEAVIEAGGHDII 166
>gi|399923832|ref|ZP_10781190.1| hypothetical protein Prhi1_01255 [Peptoniphilus rhinitidis 1-13]
Length = 241
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI++ K +D +K +FT L++++ +A KE GG DP+ N L ID K +
Sbjct: 2 SGHSKWNNIKNKKGKEDAKKGKIFTKLARQITVAAKE-GGLDPDYNPSLKVAIDKAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ AI +N + E+ + P +A +V+ CL +R R P
Sbjct: 61 MPNDNIDRAIAKAGGGDNDDNFEEIVYEGYGPG-GVAVMVN-----CLTD--NRNRTAPE 112
Query: 148 ANFISNR 154
I ++
Sbjct: 113 VRHIFDK 119
>gi|251771398|gb|EES51977.1| conserved protein of unknown function [Leptospirillum
ferrodiazotrophum]
Length = 251
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KA D ++ +FT LSK++ +A + GGG DP+ N RL + I ++ +
Sbjct: 2 SGHSKWATTKHKKALIDSKRGKVFTRLSKEISIAARLGGG-DPDGNPRLRTAIAKAREEN 60
Query: 88 MPMTTIENAIK--SCNVPENIYGYLE 111
MPM I+ AI+ + +P +Y L+
Sbjct: 61 MPMDNIKKAIQKGTGEIPGAVYEELQ 86
>gi|384176364|ref|YP_005557749.1| hypothetical protein I33_2830 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349595588|gb|AEP91775.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 240
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L I+ K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGVDPEANSALRLVIEKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 61 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 100
>gi|327399041|ref|YP_004339910.1| hypothetical protein Hipma_0881 [Hippea maritima DSM 10411]
gi|327181670|gb|AEA33851.1| UPF0082 protein yeeN [Hippea maritima DSM 10411]
Length = 252
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H KA +D ++ +FT L K++ +A + GGG DP +N RL I+ K+++
Sbjct: 2 SGHNKWSTIKHKKAKEDAKRGAIFTKLIKEITIAARLGGG-DPESNPRLRMAIEKAKEAN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKQNIEKAIK 71
>gi|321312312|ref|YP_004204599.1| hypothetical protein BSn5_04720 [Bacillus subtilis BSn5]
gi|320018586|gb|ADV93572.1| hypothetical protein BSn5_04720 [Bacillus subtilis BSn5]
Length = 240
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L I+ K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGADPEANSALRLVIEKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 61 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 100
>gi|238924321|ref|YP_002937837.1| hypothetical protein EUBREC_1961 [Eubacterium rectale ATCC 33656]
gi|259646537|sp|C4ZBH1.1|Y1961_EUBR3 RecName: Full=Probable transcriptional regulatory protein
EUBREC_1961
gi|238875996|gb|ACR75703.1| hypothetical protein EUBREC_1961 [Eubacterium rectale ATCC 33656]
Length = 242
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKE GG DP N++LA + K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTMIGRELAVAVKE-GGPDPANNFKLAQVVAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK N Y + + P+ G+A +V ++ + +
Sbjct: 61 MPNDTIERGIKKAAGDGNSVNYETATYEGYGPS----------GTAIIVKCLTDNKNRTA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|34581562|ref|ZP_00143042.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262947|gb|EAA26451.1| unknown [Rickettsia sibirica 246]
Length = 253
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV-SLEGSACLVSAMSRVRFPP 146
+P I+ AI S N N Y E+ + P IA +V +L + +A R F
Sbjct: 62 LPKERIDKAINSANDSSNNENYTEIRYEGYAPN-GIAIIVEALTDNKNRTAAEIRSSFTK 120
Query: 147 ---------SANFISNRLGLFLECSEPITRMKQASVLLAT--ALAHNVF 184
S N++ N G+ PI VL A A H++
Sbjct: 121 YGGSLGETGSVNYLFNHCGV---IQYPINIASNEDVLEAVIEAGGHDII 166
>gi|154498059|ref|ZP_02036437.1| hypothetical protein BACCAP_02040 [Bacteroides capillosus ATCC
29799]
gi|150273049|gb|EDN00206.1| DNA-binding regulatory protein, YebC/PmpR family
[Pseudoflavonifractor capillosus ATCC 29799]
Length = 242
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A D +++ +FT +++++ +AVK GG DP N RLA+ I K ++
Sbjct: 2 SGHSKWHNIQKTKGAADAKRSQIFTKIAREMIVAVKTGGSGDPANNSRLATVIAKAKAAN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP I+ I N Y + + P G A +V A++ R R
Sbjct: 62 MPNDNIKRTIDKALGSGNTDSYENVVYEGYGPC----------GVAVIVEALTDNRNRTA 111
Query: 146 PSANFISNRLG 156
P I ++ G
Sbjct: 112 PFVRHIFDKYG 122
>gi|325266856|ref|ZP_08133527.1| YebC like protein [Kingella denitrificans ATCC 33394]
gi|324981597|gb|EGC17238.1| YebC like protein [Kingella denitrificans ATCC 33394]
Length = 242
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A K+GGG DPN N RL ++ ++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTKLIKEITIAAKQGGG-DPNANPRLRLAMEKAWDAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|257458165|ref|ZP_05623319.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
gi|257444459|gb|EEV19548.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
Length = 247
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT K++ +A + GGG DPN N RL + I + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQMFTKFIKEISIAARMGGG-DPNGNPRLRTAILKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK Y EL + P G A LV ++ + +
Sbjct: 61 MPKDNIERAIKKGTGELGGASYEELLYEGYAPG----------GVAVLVEVLTDNKNRAA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|157826982|ref|YP_001496046.1| hypothetical protein A1I_03240 [Rickettsia bellii OSU 85-389]
gi|166229092|sp|A8GVY2.1|Y3240_RICB8 RecName: Full=Probable transcriptional regulatory protein A1I_03240
gi|157802286|gb|ABV79009.1| hypothetical protein A1I_03240 [Rickettsia bellii OSU 85-389]
Length = 256
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ AVK G T+P+ N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAVK-AGSTNPDNNPRLRTALATARSQN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
+P I+ AI S N N Y E+ + P
Sbjct: 61 LPKERIDKAINSANDSANNENYTEIRYEGYAP 92
>gi|325290234|ref|YP_004266415.1| hypothetical protein Sgly_2123 [Syntrophobotulus glycolicus DSM
8271]
gi|324965635|gb|ADY56414.1| UPF0082 protein yeeN [Syntrophobotulus glycolicus DSM 8271]
Length = 251
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KA D K L+T L++++ +A + G DPN N+RL ID K ++
Sbjct: 2 SGHSKWANIKHKKARTDAAKGKLYTKLAREIFIAAR-AGSPDPNNNFRLKIAIDNAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
+P I+ A++ + + Y EL + P
Sbjct: 61 LPNENIQRAVQKGSGTGDDTNYEELRYEGYGP 92
>gi|383309869|ref|YP_005362679.1| YebC like protein [Pasteurella multocida subsp. multocida str.
HN06]
gi|380871141|gb|AFF23508.1| YebC like protein [Pasteurella multocida subsp. multocida str.
HN06]
Length = 246
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVNANPRLRTAVDKALSSN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|291525103|emb|CBK90690.1| conserved hypothetical protein TIGR01033 [Eubacterium rectale DSM
17629]
gi|291529408|emb|CBK94994.1| conserved hypothetical protein TIGR01033 [Eubacterium rectale
M104/1]
Length = 242
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKE GG DP N++LA + K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTMIGRELAVAVKE-GGPDPANNFKLAQVVAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK N Y + + P+ G+A +V ++ + +
Sbjct: 61 MPNDTIERGIKKAAGDGNSVNYETATYEGYGPS----------GTAIIVKCLTDNKNRTA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|430755915|ref|YP_007208714.1| hypothetical protein A7A1_0423 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430020435|gb|AGA21041.1| Hypothetical protein YrbC [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 240
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L I+ K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGADPEVNSALRLVIEKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 61 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 100
>gi|15596161|ref|NP_249655.1| hypothetical protein PA0964 [Pseudomonas aeruginosa PAO1]
gi|107100421|ref|ZP_01364339.1| hypothetical protein PaerPA_01001446 [Pseudomonas aeruginosa PACS2]
gi|116048889|ref|YP_792310.1| hypothetical protein PA14_51810 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893065|ref|YP_002441934.1| hypothetical protein PLES_43501 [Pseudomonas aeruginosa LESB58]
gi|254239312|ref|ZP_04932635.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254245247|ref|ZP_04938569.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296390677|ref|ZP_06880152.1| hypothetical protein PaerPAb_21088 [Pseudomonas aeruginosa PAb1]
gi|313105851|ref|ZP_07792114.1| hypothetical protein PA39016_000110148 [Pseudomonas aeruginosa
39016]
gi|355647602|ref|ZP_09055139.1| hypothetical protein HMPREF1030_04225 [Pseudomonas sp. 2_1_26]
gi|386060134|ref|YP_005976656.1| hypothetical protein PAM18_4073 [Pseudomonas aeruginosa M18]
gi|386064713|ref|YP_005980017.1| hypothetical protein NCGM2_1771 [Pseudomonas aeruginosa NCGM2.S1]
gi|392985558|ref|YP_006484145.1| hypothetical protein PADK2_20870 [Pseudomonas aeruginosa DK2]
gi|416865694|ref|ZP_11915784.1| hypothetical protein PA13_28107 [Pseudomonas aeruginosa 138244]
gi|416881687|ref|ZP_11921678.1| hypothetical protein PA15_26435 [Pseudomonas aeruginosa 152504]
gi|418583571|ref|ZP_13147640.1| hypothetical protein O1O_02905 [Pseudomonas aeruginosa MPAO1/P1]
gi|418588936|ref|ZP_13152866.1| hypothetical protein O1Q_00080 [Pseudomonas aeruginosa MPAO1/P2]
gi|419753855|ref|ZP_14280253.1| hypothetical protein CF510_12782 [Pseudomonas aeruginosa
PADK2_CF510]
gi|420141110|ref|ZP_14648820.1| hypothetical protein PACIG1_4335 [Pseudomonas aeruginosa CIG1]
gi|421155537|ref|ZP_15615013.1| hypothetical protein PABE171_4374 [Pseudomonas aeruginosa ATCC
14886]
gi|421162418|ref|ZP_15621264.1| hypothetical protein PABE173_4822 [Pseudomonas aeruginosa ATCC
25324]
gi|421169664|ref|ZP_15627673.1| hypothetical protein PABE177_4460 [Pseudomonas aeruginosa ATCC
700888]
gi|421176038|ref|ZP_15633707.1| hypothetical protein PACI27_4241 [Pseudomonas aeruginosa CI27]
gi|421182037|ref|ZP_15639523.1| hypothetical protein PAE2_3992 [Pseudomonas aeruginosa E2]
gi|421515588|ref|ZP_15962274.1| hypothetical protein A161_04930 [Pseudomonas aeruginosa PAO579]
gi|424940049|ref|ZP_18355812.1| conserved hypothetical protein [Pseudomonas aeruginosa NCMG1179]
gi|451987385|ref|ZP_21935543.1| hypothetical protein YebC [Pseudomonas aeruginosa 18A]
gi|12230973|sp|Q51423.2|PMPR_PSEAE RecName: Full=Transcriptional regulatory protein PmpR
gi|122257996|sp|Q02IC6.1|Y5181_PSEAB RecName: Full=Probable transcriptional regulatory protein
PA14_51810
gi|226706171|sp|B7UXW8.1|Y4350_PSEA8 RecName: Full=Probable transcriptional regulatory protein
PLES_43501
gi|9946871|gb|AAG04353.1|AE004530_6 pqsR-mediated PQS regulator, PmpR [Pseudomonas aeruginosa PAO1]
gi|115584110|gb|ABJ10125.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126171243|gb|EAZ56754.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126198625|gb|EAZ62688.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218773293|emb|CAW29105.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310878616|gb|EFQ37210.1| hypothetical protein PA39016_000110148 [Pseudomonas aeruginosa
39016]
gi|334834325|gb|EGM13298.1| hypothetical protein PA13_28107 [Pseudomonas aeruginosa 138244]
gi|334835638|gb|EGM14500.1| hypothetical protein PA15_26435 [Pseudomonas aeruginosa 152504]
gi|346056495|dbj|GAA16378.1| conserved hypothetical protein [Pseudomonas aeruginosa NCMG1179]
gi|347306440|gb|AEO76554.1| hypothetical protein PAM18_4073 [Pseudomonas aeruginosa M18]
gi|348033272|dbj|BAK88632.1| hypothetical protein NCGM2_1771 [Pseudomonas aeruginosa NCGM2.S1]
gi|354827796|gb|EHF11935.1| hypothetical protein HMPREF1030_04225 [Pseudomonas sp. 2_1_26]
gi|375047179|gb|EHS39728.1| hypothetical protein O1O_02905 [Pseudomonas aeruginosa MPAO1/P1]
gi|375052095|gb|EHS44554.1| hypothetical protein O1Q_00080 [Pseudomonas aeruginosa MPAO1/P2]
gi|384399794|gb|EIE46159.1| hypothetical protein CF510_12782 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392321063|gb|AFM66443.1| hypothetical protein PADK2_20870 [Pseudomonas aeruginosa DK2]
gi|403246148|gb|EJY59894.1| hypothetical protein PACIG1_4335 [Pseudomonas aeruginosa CIG1]
gi|404349316|gb|EJZ75653.1| hypothetical protein A161_04930 [Pseudomonas aeruginosa PAO579]
gi|404520418|gb|EKA31091.1| hypothetical protein PABE171_4374 [Pseudomonas aeruginosa ATCC
14886]
gi|404525978|gb|EKA36219.1| hypothetical protein PABE177_4460 [Pseudomonas aeruginosa ATCC
700888]
gi|404531389|gb|EKA41344.1| hypothetical protein PACI27_4241 [Pseudomonas aeruginosa CI27]
gi|404534859|gb|EKA44580.1| hypothetical protein PABE173_4822 [Pseudomonas aeruginosa ATCC
25324]
gi|404543067|gb|EKA52372.1| hypothetical protein PAE2_3992 [Pseudomonas aeruginosa E2]
gi|451755003|emb|CCQ88066.1| hypothetical protein YebC [Pseudomonas aeruginosa 18A]
gi|453047991|gb|EME95704.1| hypothetical protein H123_00955 [Pseudomonas aeruginosa PA21_ST175]
Length = 248
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +K +FT L ++L +A ++GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKKGKIFTKLIRELTVAARQGGGV-PADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ AI + +ELS + P+ G A +V AM+ R
Sbjct: 61 MTRDTIDRAIARGVGSNDADNMVELSYEGYAPS----------GVAIIVEAMTDNR 106
>gi|386759338|ref|YP_006232554.1| hypothetical protein MY9_2765 [Bacillus sp. JS]
gi|384932620|gb|AFI29298.1| hypothetical protein MY9_2765 [Bacillus sp. JS]
Length = 240
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L I+ K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGADPEANSALRLVIEKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 61 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 100
>gi|329120304|ref|ZP_08248972.1| YebC like protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327462645|gb|EGF08968.1| YebC like protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 282
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 22 YLLVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTID 81
Y AGHSKW NI+H KA D ++ +FT L K++ +A + GGG DPN+N RL +D
Sbjct: 37 YKDTDMAGHSKWANIQHKKARADAQRGKIFTRLIKEITVAARLGGG-DPNSNPRLRLAMD 95
Query: 82 YCKKSSMPMTTIENAIKSCNVPENIYG--YLEL 112
++MP ++ AI N+ G Y+EL
Sbjct: 96 KAWDANMPKDNVQRAIDKG--TGNVEGAEYIEL 126
>gi|161723846|ref|NP_360318.2| hypothetical protein RC0681 [Rickettsia conorii str. Malish 7]
gi|33517085|sp|Q92HU0.2|Y681_RICCN RecName: Full=Probable transcriptional regulatory protein RC0681
Length = 253
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S N N Y E+ + P G A +V A++
Sbjct: 62 LPKERIDKAINSANDSSNNENYTEIRYEGYAPN----------GIAIIVEALT 104
>gi|189424310|ref|YP_001951487.1| hypothetical protein Glov_1245 [Geobacter lovleyi SZ]
gi|226696294|sp|B3E787.1|Y1245_GEOLS RecName: Full=Probable transcriptional regulatory protein
Glov_1245
gi|189420569|gb|ACD94967.1| protein of unknown function DUF28 [Geobacter lovleyi SZ]
Length = 247
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ +FT + K++ +A K GGG DP N RL + ID K +
Sbjct: 2 SGHNKWSTIKHKKGAADAKRGKIFTKIIKEISVAAKLGGG-DPAANPRLRTAIDKAKGEN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|335424116|ref|ZP_08553132.1| hypothetical protein SSPSH_15539 [Salinisphaera shabanensis E1L3A]
gi|335424456|ref|ZP_08553465.1| hypothetical protein SSPSH_17234 [Salinisphaera shabanensis E1L3A]
gi|334889141|gb|EGM27433.1| hypothetical protein SSPSH_17234 [Salinisphaera shabanensis E1L3A]
gi|334890404|gb|EGM28674.1| hypothetical protein SSPSH_15539 [Salinisphaera shabanensis E1L3A]
Length = 249
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D+++ +FT + +++ +A + GGG DPN N RL D ++
Sbjct: 2 AGHSKWANIQHRKNAQDKKRGKVFTKIIREITVAARMGGG-DPNDNPRLRLAWDKALAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVS----AMSRVR 143
MP IE A+K Y E+ + P +A +V C+ +S VR
Sbjct: 61 MPKDNIERAVKRGTGDGQADNYEEIRYEGYGPN-GVAIMVD-----CMTDNKNRTVSEVR 114
Query: 144 F 144
+
Sbjct: 115 Y 115
>gi|257790722|ref|YP_003181328.1| hypothetical protein Elen_0967 [Eggerthella lenta DSM 2243]
gi|257474619|gb|ACV54939.1| protein of unknown function DUF28 [Eggerthella lenta DSM 2243]
Length = 266
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA+D +++ LF+ LS+ + +A KEGG +P+ N LA+ I+ K S
Sbjct: 2 SGHSKWATTKHRKAAQDAKRSALFSKLSRNITVAAKEGGDPNPDNNASLAAAIEKAKGYS 61
Query: 88 MPMTTIENAIKSC 100
+P I+ AI
Sbjct: 62 LPKDKIKVAIDKA 74
>gi|298242492|ref|ZP_06966299.1| protein of unknown function DUF28 [Ktedonobacter racemifer DSM
44963]
gi|297555546|gb|EFH89410.1| protein of unknown function DUF28 [Ktedonobacter racemifer DSM
44963]
Length = 253
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW IR K D + LFT L +++ +AV+EGG D N+RL + + ++
Sbjct: 2 SGHSKWAQIRRSKGVNDARRGQLFTRLGREIVVAVREGGSGDTAANFRLRMAVQRARDAN 61
Query: 88 MPMTTIENAIKSC 100
MP+ IE IK
Sbjct: 62 MPLDNIERTIKRA 74
>gi|167766632|ref|ZP_02438685.1| hypothetical protein CLOSS21_01138 [Clostridium sp. SS2/1]
gi|317499464|ref|ZP_07957730.1| hypothetical protein HMPREF0996_02714 [Lachnospiraceae bacterium
5_1_63FAA]
gi|429762165|ref|ZP_19294568.1| DNA-binding regulatory protein, YebC/PmpR family [Anaerostipes
hadrus DSM 3319]
gi|167711755|gb|EDS22334.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium sp.
SS2/1]
gi|291558650|emb|CBL37450.1| conserved hypothetical protein TIGR01033 [butyrate-producing
bacterium SSC/2]
gi|316893238|gb|EFV15454.1| hypothetical protein HMPREF0996_02714 [Lachnospiraceae bacterium
5_1_63FAA]
gi|429182250|gb|EKY23368.1| DNA-binding regulatory protein, YebC/PmpR family [Anaerostipes
hadrus DSM 3319]
Length = 242
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D +K +FT + +++ +AVKE GG DP+ N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAKKGKIFTVIGREIAVAVKE-GGPDPDNNSRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPT 120
MP TIE IK + Y +++ + P+
Sbjct: 61 MPNDTIERGIKKAAGDADSVNYEQITYEGYGPS 93
>gi|406962504|gb|EKD88838.1| hypothetical protein ACD_34C00308G0003 [uncultured bacterium]
Length = 251
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT L++++ ++ +EGG DP++N+RL ID + S
Sbjct: 2 SGHSKWATIKRKKGATDAKRGQVFTRLTREIVMSAREGGA-DPDSNFRLRLAIDKARAQS 60
Query: 88 MPMTTIENAIK 98
MP I+ A+K
Sbjct: 61 MPKDNIDRALK 71
>gi|299144379|ref|ZP_07037459.1| glucose-1-phosphate adenylyltransferase [Peptoniphilus sp. oral
taxon 386 str. F0131]
gi|298518864|gb|EFI42603.1| glucose-1-phosphate adenylyltransferase [Peptoniphilus sp. oral
taxon 386 str. F0131]
Length = 246
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI++ K +D + +FT L + + +AVKE GG DP N L ID K +
Sbjct: 2 SGHSKWNNIKNKKGKEDARRGRIFTKLGRYIMVAVKE-GGPDPEYNPSLKVAIDKAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E++ + P+ IA +V+ CL +R R P
Sbjct: 61 MPNDNIERAIKKGAGADADSNYEEITYEGYGPS-GIAIMVN-----CLTD--NRNRTAPD 112
Query: 148 ANFISNRLG 156
++ G
Sbjct: 113 IRHAFDKYG 121
>gi|317488567|ref|ZP_07947112.1| hypothetical protein HMPREF1023_00810 [Eggerthella sp. 1_3_56FAA]
gi|325832024|ref|ZP_08165121.1| DNA-binding regulatory protein, YebC/PmpR family [Eggerthella sp.
HGA1]
gi|316912309|gb|EFV33873.1| hypothetical protein HMPREF1023_00810 [Eggerthella sp. 1_3_56FAA]
gi|325486345|gb|EGC88797.1| DNA-binding regulatory protein, YebC/PmpR family [Eggerthella sp.
HGA1]
Length = 266
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA+D +++ LF+ LS+ + +A KEGG +P+ N LA+ I+ K S
Sbjct: 2 SGHSKWATTKHRKAAQDAKRSALFSKLSRNITVAAKEGGDPNPDNNASLAAAIEKAKGYS 61
Query: 88 MPMTTIENAIKSC 100
+P I+ AI
Sbjct: 62 LPKDKIKVAIDKA 74
>gi|16079834|ref|NP_390660.1| hypothetical protein BSU27820 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221315046|ref|ZP_03596851.1| hypothetical protein BsubsN3_15117 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319966|ref|ZP_03601260.1| hypothetical protein BsubsJ_15033 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|402776938|ref|YP_006630882.1| protein YrbC [Bacillus subtilis QB928]
gi|452915573|ref|ZP_21964199.1| DNA-binding regulatory , YebC/PmpR family protein [Bacillus
subtilis MB73/2]
gi|6226494|sp|P94447.2|YRBC_BACSU RecName: Full=Probable transcriptional regulatory protein YrbC
gi|2635247|emb|CAB14742.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|6977799|emb|CAB75324.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
gi|402482118|gb|AFQ58627.1| YrbC [Bacillus subtilis QB928]
gi|407959977|dbj|BAM53217.1| hypothetical protein BEST7613_4286 [Bacillus subtilis BEST7613]
gi|407965620|dbj|BAM58859.1| hypothetical protein BEST7003_2658 [Bacillus subtilis BEST7003]
gi|452115921|gb|EME06317.1| DNA-binding regulatory , YebC/PmpR family protein [Bacillus
subtilis MB73/2]
Length = 240
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L I+ K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGADPEANSALRLVIEKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 61 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 100
>gi|342213643|ref|ZP_08706366.1| DNA-binding regulatory protein, YebC/PmpR family [Veillonella sp.
oral taxon 780 str. F0422]
gi|341597731|gb|EGS40270.1| DNA-binding regulatory protein, YebC/PmpR family [Veillonella sp.
oral taxon 780 str. F0422]
Length = 243
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K D KA + T +S+++ +AVK GGTDP N RL + ++++
Sbjct: 2 SGHSKWSNIKHRKGKNDALKAKVTTKISREITVAVK-AGGTDPTGNMRLKLALQKARENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
+P I+ AI + Y E++ + P G+A LV M+ R +
Sbjct: 61 IPKDNIQRAIDKGAGAGDANNYEEITYEGYGPG----------GAAILVEVMTDNRNRAA 110
Query: 148 ANF 150
A+
Sbjct: 111 ADV 113
>gi|408356396|ref|YP_006844927.1| hypothetical protein AXY_10330 [Amphibacillus xylanus NBRC 15112]
gi|407727167|dbj|BAM47165.1| hypothetical protein AXY_10330 [Amphibacillus xylanus NBRC 15112]
Length = 240
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F +K + +A KEGG DP TN L ID K +
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKIFMKAAKDIYIAAKEGGA-DPETNPALRLAIDKAKAQN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE IK + Y E+ + P S + L + +A R F S
Sbjct: 61 MPNENIERNIKKATGTLDGVSYEEVIYEGYGPGGSAVMVELLTDNKNRSAAEVRHAFSKS 120
Query: 148 A---------NFISNRLGLFLECSEPITRMKQASVLLA 176
+F+ NR G +L T + +V+LA
Sbjct: 121 GGNLGENGCVSFLFNRKG-YLVIERSKTDADEDTVMLA 157
>gi|352518634|ref|YP_004887951.1| hypothetical protein TEH_24600 [Tetragenococcus halophilus NBRC
12172]
gi|348602741|dbj|BAK95787.1| hypothetical protein TEH_24600 [Tetragenococcus halophilus NBRC
12172]
Length = 240
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D +K +F +S+++ +A + GG DP+TN L +D K ++
Sbjct: 2 SGHSKWNNIQGRKNAQDAKKGKIFQKISREIYMAAR-NGGPDPDTNSSLRMVMDKAKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP +E AIK + Y E++ + P
Sbjct: 61 MPNDNVERAIKKATSSTDGANYEEVTYEGYGP 92
>gi|452204728|ref|YP_007484857.1| putative transcriptional regulatory protein, YebC/PmpR family
[Dehalococcoides mccartyi BTF08]
gi|452111784|gb|AGG07515.1| putative transcriptional regulatory protein, YebC/PmpR family
[Dehalococcoides mccartyi BTF08]
Length = 251
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT LS+++ A K+GG + P N RL I K S
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKLSREIIFAAKQGGPS-PEGNARLRLAIQKAKDSR 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK + +E+ + P G A LV+ MS R
Sbjct: 61 MPSDNIERAIKKGSGELEGMTVIEMILEGYGPG----------GVAVLVNGMSDNR 106
>gi|407794726|ref|ZP_11141748.1| hypothetical protein A10D4_11284 [Idiomarina xiamenensis 10-D-4]
gi|407210921|gb|EKE80793.1| hypothetical protein A10D4_11284 [Idiomarina xiamenensis 10-D-4]
Length = 251
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L +++ ++ +E GG +P TN RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIREITVSARE-GGPEPETNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
M T++ AIK NV E Y GY
Sbjct: 61 MKRDTVDTAIKRGSGELDGDNVEELTYEGY 90
>gi|268317946|ref|YP_003291665.1| hypothetical protein Rmar_2399 [Rhodothermus marinus DSM 4252]
gi|345304226|ref|YP_004826128.1| hypothetical protein Rhom172_2398 [Rhodothermus marinus
SG0.5JP17-172]
gi|262335480|gb|ACY49277.1| protein of unknown function DUF28 [Rhodothermus marinus DSM 4252]
gi|345113459|gb|AEN74291.1| protein of unknown function DUF28 [Rhodothermus marinus
SG0.5JP17-172]
Length = 248
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++ KA D K+ ++ LS+ + +A +EGGG DP N RLA I+ + +
Sbjct: 2 AGHNKWSKVKRQKAVVDARKSKIWARLSRDIIVAAREGGG-DPEANPRLAQAIERARAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP IE AIK Y+E++ + P
Sbjct: 61 MPKENIERAIKRGTGEIQGEDYVEVTYEGYAP 92
>gi|221310721|ref|ZP_03592568.1| hypothetical protein Bsubs1_15211 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221324247|ref|ZP_03605541.1| hypothetical protein BsubsS_15177 [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 260
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KEGG DP N L I+ K ++
Sbjct: 22 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKEGGA-DPEANSALRLVIEKAKGAN 80
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 81 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 120
>gi|350266951|ref|YP_004878258.1| hypothetical protein GYO_3022 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599838|gb|AEP87626.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 240
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L ID K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGADPEANSALRLVIDKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK + Y E++ + P+ IA +V
Sbjct: 61 MPNENIDRAIKKAAGSLDGSSYEEITYEGYGPS-GIAVMVE 100
>gi|418032038|ref|ZP_12670521.1| hypothetical protein BSSC8_14650 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351470901|gb|EHA31022.1| hypothetical protein BSSC8_14650 [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 251
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L I+ K ++
Sbjct: 13 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGADPEANSALRLVIEKAKGAN 71
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 72 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 111
>gi|149201067|ref|ZP_01878042.1| hypothetical protein RTM1035_15617 [Roseovarius sp. TM1035]
gi|149145400|gb|EDM33426.1| hypothetical protein RTM1035_15617 [Roseovarius sp. TM1035]
Length = 246
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +A LF+ SK++ +A K G DP+ N RL I K S
Sbjct: 2 AGHSKWANIQHRKGRQDAVRAKLFSKFSKEITVAAKM-GDPDPDKNPRLRLAIKEAKAQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + + Y E+ + P G A +V AM+ R +
Sbjct: 61 MPKDNIERAIKKA-MGGDAEDYEEIRYEGYGPN----------GVAIIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|428280237|ref|YP_005561972.1| hypothetical protein BSNT_04039 [Bacillus subtilis subsp. natto
BEST195]
gi|291485194|dbj|BAI86269.1| hypothetical protein BSNT_04039 [Bacillus subtilis subsp. natto
BEST195]
Length = 260
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KEGG DP N L I+ K ++
Sbjct: 22 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKEGGA-DPEANSALRLVIEKAKGAN 80
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 81 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 120
>gi|220927640|ref|YP_002504549.1| hypothetical protein Ccel_0181 [Clostridium cellulolyticum H10]
gi|254800643|sp|B8I4L5.1|Y181_CLOCE RecName: Full=Probable transcriptional regulatory protein Ccel_0181
gi|219997968|gb|ACL74569.1| protein of unknown function DUF28 [Clostridium cellulolyticum H10]
Length = 248
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A D + +FT L +++++AV+ GG DP++N +L I CK ++
Sbjct: 2 SGHSKWANIKRQKGAADAVRGKIFTKLGREIQIAVRM-GGADPSSNSKLKDVIAKCKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ +IK + + Y E++ + P
Sbjct: 61 MPNDNIQRSIKRASGETDGSNYEEITYEGYGP 92
>gi|254423344|ref|ZP_05037062.1| conserved hypothetical protein TIGR01033 [Synechococcus sp. PCC
7335]
gi|196190833|gb|EDX85797.1| conserved hypothetical protein TIGR01033 [Synechococcus sp. PCC
7335]
Length = 257
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D K +F LS+++ +A + GGG DP+ N++L + ID K +S
Sbjct: 2 AGHSKWANIKRQKARVDAVKGKVFAKLSREIIVAARLGGG-DPDGNFQLRTAIDKAKAAS 60
Query: 88 MPMTTIENAI-KSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPP 146
P I+ AI K C + + + + P G A L+ A++ R
Sbjct: 61 FPKENIDRAIAKGCGNSDGADAFESIRYEGYGPG----------GVAVLIEALTDNRNRA 110
Query: 147 SANF 150
+A+
Sbjct: 111 AADL 114
>gi|339445643|ref|YP_004711647.1| hypothetical protein EGYY_21560 [Eggerthella sp. YY7918]
gi|338905395|dbj|BAK45246.1| uncharacterized ACR [Eggerthella sp. YY7918]
Length = 266
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA+D +++ LF+ LS+ + +A KEGG +P+ N LA+ I+ K S
Sbjct: 2 SGHSKWATTKHRKAAQDAKRSALFSKLSRNITVAAKEGGDPNPDNNASLAAAIEKAKGYS 61
Query: 88 MPMTTIENAIKSC 100
+P I+ AI
Sbjct: 62 LPKDKIKVAIDKA 74
>gi|449095225|ref|YP_007427716.1| hypothetical protein C663_2623 [Bacillus subtilis XF-1]
gi|449029140|gb|AGE64379.1| hypothetical protein C663_2623 [Bacillus subtilis XF-1]
Length = 251
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KE GG DP N L I+ K ++
Sbjct: 13 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKE-GGADPEANSALRLVIEKAKGAN 71
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK ++ Y E++ + P+ IA +V
Sbjct: 72 MPNENIDRAIKKAAGGQDGSSYEEITYEGYGPS-GIAVMVE 111
>gi|85706421|ref|ZP_01037515.1| hypothetical protein ROS217_16040 [Roseovarius sp. 217]
gi|85669194|gb|EAQ24061.1| hypothetical protein ROS217_16040 [Roseovarius sp. 217]
Length = 246
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +A LF+ SK++ +A K G DP+ N RL I K S
Sbjct: 2 AGHSKWANIQHRKGRQDAVRAKLFSKFSKEITVAAK-MGDPDPDKNPRLRLAIKEAKAQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + + Y E+ + P G A +V AM+ R +
Sbjct: 61 MPKDNIERAIKKA-MGGDAEDYEEIRYEGYGPN----------GVAIIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|256826837|ref|YP_003150796.1| hypothetical protein Ccur_03900 [Cryptobacterium curtum DSM 15641]
gi|256582980|gb|ACU94114.1| conserved hypothetical protein TIGR01033 [Cryptobacterium curtum
DSM 15641]
Length = 265
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA+D +++ LF LS+ + +A KEGG +P+ N LA+ I+ K S
Sbjct: 2 SGHSKWATTKHRKAAQDAKRSALFGKLSRNITVAAKEGGDPNPDNNASLAAAIEKAKGYS 61
Query: 88 MPMTTIENAIKSC 100
+P I+ AI
Sbjct: 62 LPKDKIKTAIDKA 74
>gi|339443421|ref|YP_004709426.1| hypothetical protein CXIVA_23570 [Clostridium sp. SY8519]
gi|338902822|dbj|BAK48324.1| hypothetical protein CXIVA_23570 [Clostridium sp. SY8519]
Length = 242
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP+ N RL I K ++
Sbjct: 2 SGHSKFSNIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGPDPDNNSRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK + Y + + P G+A +V A++ + +
Sbjct: 61 MPNDTIERGIKKAAGDADSVNYETATYEGYGPN----------GTAIIVKALTDNKNRTA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|326791289|ref|YP_004309110.1| hypothetical protein Clole_2199 [Clostridium lentocellum DSM 5427]
gi|326542053|gb|ADZ83912.1| protein of unknown function DUF28 [Clostridium lentocellum DSM
5427]
Length = 243
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H KA D +K +FT + +++ +AVKEGG DP+ N +L+ I K ++
Sbjct: 2 SGHSKFANIKHKKAKNDAQKGKVFTKIGREIAVAVKEGGA-DPSLNRKLSDVIAKAKSNN 60
Query: 88 MPMTTIENAIKSC 100
MP TI+ +IK
Sbjct: 61 MPNDTIQRSIKKA 73
>gi|73748286|ref|YP_307525.1| hypothetical protein cbdb_A400 [Dehalococcoides sp. CBDB1]
gi|289432335|ref|YP_003462208.1| hypothetical protein DehalGT_0385 [Dehalococcoides sp. GT]
gi|452203292|ref|YP_007483425.1| putative transcriptional regulatory protein, YebC/PmpR family
[Dehalococcoides mccartyi DCMB5]
gi|119391992|sp|Q3ZZK4.1|Y400_DEHSC RecName: Full=Probable transcriptional regulatory protein cbdbA400
gi|73660002|emb|CAI82609.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1]
gi|288946055|gb|ADC73752.1| protein of unknown function DUF28 [Dehalococcoides sp. GT]
gi|452110351|gb|AGG06083.1| putative transcriptional regulatory protein, YebC/PmpR family
[Dehalococcoides mccartyi DCMB5]
Length = 251
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT LS+++ A K+GG + P N RL I K S
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKLSREIIFAAKQGGPS-PEGNARLRLAIQKAKDSR 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK + +E+ + P G A LV+ MS R
Sbjct: 61 MPSDNIERAIKKGSGELEGTTVIEMILEGYGPG----------GVAVLVNGMSDNR 106
>gi|51473643|ref|YP_067400.1| hypothetical protein RT0442 [Rickettsia typhi str. Wilmington]
gi|383752421|ref|YP_005427521.1| hypothetical protein RTTH1527_02170 [Rickettsia typhi str. TH1527]
gi|383843258|ref|YP_005423761.1| hypothetical protein RTB9991CWPP_02180 [Rickettsia typhi str.
B9991CWPP]
gi|60390802|sp|Q68WS4.1|Y442_RICTY RecName: Full=Probable transcriptional regulatory protein RT0442
gi|51459955|gb|AAU03918.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
gi|380759064|gb|AFE54299.1| hypothetical protein RTTH1527_02170 [Rickettsia typhi str. TH1527]
gi|380759905|gb|AFE55139.1| hypothetical protein RTB9991CWPP_02180 [Rickettsia typhi str.
B9991CWPP]
Length = 252
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK++NI+H K A+D++K+ +FT L +++ AVK G P N RL ++ + +
Sbjct: 2 SGHSKFKNIQHRKGAQDKKKSKVFTKLIREIVTAVKTGASNVPENNPRLRKALNAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
+P I+ AI S N N Y E+ + P
Sbjct: 62 LPKERIDKAINSANDASNTESYTEIRYEGYAP 93
>gi|147669066|ref|YP_001213884.1| hypothetical protein DehaBAV1_0421 [Dehalococcoides sp. BAV1]
gi|189040284|sp|A5FS26.1|Y421_DEHSB RecName: Full=Probable transcriptional regulatory protein
DehaBAV1_0421
gi|146270014|gb|ABQ17006.1| protein of unknown function DUF28 [Dehalococcoides sp. BAV1]
Length = 251
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT LS+++ A K+GG + P N RL I K S
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKLSREIIFAAKQGGPS-PEGNARLRLAIQKAKDSR 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK + +E+ + P G A LV+ MS R
Sbjct: 61 MPSDNIERAIKKGSGELEGTTVIEMILEGYGPG----------GVAVLVNGMSDNR 106
>gi|443469216|ref|ZP_21059397.1| Hypothetical protein YebC [Pseudomonas pseudoalcaligenes KF707]
gi|442898551|gb|ELS25226.1| Hypothetical protein YebC [Pseudomonas pseudoalcaligenes KF707]
Length = 249
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L ++L +A K GGG +P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKRGKIFTKLIRELTVAAKHGGG-NPADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ AI + +ELS + P+ G A +V AM+ R
Sbjct: 61 MTRDTIDRAIARGAGSNDADNMVELSYEGYAPS----------GVAIIVEAMTDNR 106
>gi|56695969|ref|YP_166323.1| hypothetical protein SPO1072 [Ruegeria pomeroyi DSS-3]
gi|67462019|sp|Q5LUI2.1|Y1072_SILPO RecName: Full=Probable transcriptional regulatory protein SPO1072
gi|56677706|gb|AAV94372.1| conserved hypothetical protein TIGR01033 [Ruegeria pomeroyi DSS-3]
Length = 246
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ SK++ +A K G DP+ N RL I K S
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKFSKEITVAAKM-GDPDPDKNPRLRLAIKEAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + + Y E+ + P G A +V AM+ R +
Sbjct: 61 MPKDNIERAIKKA-IGGDGDAYEEIRYEGYGPN----------GVAVIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|387769648|ref|ZP_10125853.1| DNA-binding regulatory protein, YebC/PmpR family [Pasteurella
bettyae CCUG 2042]
gi|386906422|gb|EIJ71152.1| DNA-binding regulatory protein, YebC/PmpR family [Pasteurella
bettyae CCUG 2042]
Length = 247
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D TN RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVGTNPRLRTAVDKALASN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|381180009|ref|ZP_09888854.1| protein of unknown function DUF28 [Treponema saccharophilum DSM
2985]
gi|380768105|gb|EIC02099.1| protein of unknown function DUF28 [Treponema saccharophilum DSM
2985]
Length = 245
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ LFT L K++ +A GGG D N N RL + I + +S
Sbjct: 2 SGHNKWSTIKHAKGAADAKRGALFTKLIKEISIAASMGGG-DQNANPRLRAAIVKARAAS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK G EL+ ++ + + G A LV ++ +
Sbjct: 61 MPKDNIERAIKK--------GTGELAGGTFEEL--VYEGYAAGGVAVLVEVLTDNHNRAA 110
Query: 148 ANF--ISNRLGLFLECSEPITRM 168
AN I N+ G L S ++RM
Sbjct: 111 ANVRNIFNKHGGNLGTSGSVSRM 133
>gi|317154309|ref|YP_004122357.1| hypothetical protein Daes_2613 [Desulfovibrio aespoeensis Aspo-2]
gi|316944560|gb|ADU63611.1| protein of unknown function DUF28 [Desulfovibrio aespoeensis
Aspo-2]
Length = 247
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +KA FT +K + LA K GGG P N L I K+ +
Sbjct: 2 AGHSKWANIQHRKGRQDAKKAKFFTKAAKDIILAAKAGGGN-PEDNSGLRLAIQKAKQVN 60
Query: 88 MPMTTIENAIK 98
+P IENAIK
Sbjct: 61 LPKDRIENAIK 71
>gi|167749986|ref|ZP_02422113.1| hypothetical protein EUBSIR_00954 [Eubacterium siraeum DSM 15702]
gi|167657007|gb|EDS01137.1| DNA-binding regulatory protein, YebC/PmpR family [Eubacterium
siraeum DSM 15702]
gi|291557888|emb|CBL35005.1| conserved hypothetical protein TIGR01033 [Eubacterium siraeum
V10Sc8a]
Length = 243
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K KD +A +FT +S+++ +A+KEGGG DPN N +LA+ I K ++
Sbjct: 2 SGHSKWSTIKRKKGEKDGARAKVFTKISREIIVAIKEGGG-DPNNNAKLATLIQKAKSNN 60
Query: 88 MPMTTIENAIK 98
+P I+ IK
Sbjct: 61 IPNDNIDRLIK 71
>gi|407893601|ref|ZP_11152631.1| hypothetical protein Dmas2_06105 [Diplorickettsia massiliensis
20B]
Length = 238
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ +A + GGG D NTN RL +D ++
Sbjct: 2 AGHSKWANIQHRKNAQDAKRGKLFTKLIREINVAARIGGG-DINTNPRLRLAVDKGLAAN 60
Query: 88 MPMTTIENAIK 98
M TIE AIK
Sbjct: 61 MTKDTIERAIK 71
>gi|291530522|emb|CBK96107.1| conserved hypothetical protein TIGR01033 [Eubacterium siraeum
70/3]
Length = 243
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K KD +A +FT +S+++ +A+KEGGG DPN N +LA+ I K ++
Sbjct: 2 SGHSKWSTIKRKKGEKDGARAKVFTKISREIIVAIKEGGG-DPNNNAKLATLIQKAKSNN 60
Query: 88 MPMTTIENAIK 98
+P I+ IK
Sbjct: 61 IPNDNIDRLIK 71
>gi|404379669|ref|ZP_10984723.1| UPF0082 protein [Simonsiella muelleri ATCC 29453]
gi|294483117|gb|EFG30804.1| UPF0082 protein [Simonsiella muelleri ATCC 29453]
Length = 245
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D ++ +FT L K++ +A +EGGG DP +N RL +D ++
Sbjct: 6 AGHSKWANIQHKKARVDAQRGKIFTKLIKEITVAAREGGG-DPASNPRLRLAMDKAWDAN 64
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 65 MPKDNVQRAIDKGTGNLEGVDYIEL 89
>gi|163781653|ref|ZP_02176653.1| hypothetical protein HG1285_02183 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882873|gb|EDP76377.1| hypothetical protein HG1285_02183 [Hydrogenivirga sp. 128-5-R1-1]
Length = 250
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS W I+H KA D ++ LF+ L +++ +A + GG++P N RL + I+ KK++
Sbjct: 2 AGHSHWAQIKHKKAKVDAQRGKLFSKLIREITVAAR-LGGSNPEFNPRLRTAIEQAKKAN 60
Query: 88 MPMTTIENAIK 98
MP+ TIE AIK
Sbjct: 61 MPLETIERAIK 71
>gi|379018892|ref|YP_005295126.1| hypothetical protein RPK_02160 [Rickettsia rickettsii str. Hlp#2]
gi|376331472|gb|AFB28706.1| hypothetical protein RPK_02160 [Rickettsia rickettsii str. Hlp#2]
Length = 255
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV-SLEGSACLVSAMSRVRFPP 146
+P I+ A+ S N N Y E+ + P IA +V +L + +A R F
Sbjct: 62 LPKERIDKALNSANESSNNENYTEIRYEGYAPN-GIAIIVEALTDNKNRTAAEVRSSFTK 120
Query: 147 ---------SANFISNRLGLFLECSEPITRMKQASVLLAT--ALAHNVF 184
S N++ N G+ PI +VL A A H++
Sbjct: 121 YGGSLGETGSVNYLFNHCGV---IQYPINIASNENVLEAVIEAGGHDII 166
>gi|257414297|ref|ZP_04745870.2| glucose-1-phosphate adenylyltransferase [Roseburia intestinalis
L1-82]
gi|257200541|gb|EEU98825.1| glucose-1-phosphate adenylyltransferase [Roseburia intestinalis
L1-82]
Length = 257
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
V +GHSK+ NI+H K D K +FT + +++ +AVK+ GG DP N++LA I K
Sbjct: 14 VFMSGHSKFANIKHKKEKNDAAKGKIFTIIGREIAVAVKD-GGPDPANNFKLAQVIAKAK 72
Query: 85 KSSMPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRF 144
S+MP TIE IK + N Y + + P+ G+A +V ++ +
Sbjct: 73 ASNMPNDTIERGIKKASGEGNSVNYEYCTYEGYGPS----------GTAIIVKCLTDNKN 122
Query: 145 PPSAN 149
+AN
Sbjct: 123 RTAAN 127
>gi|189184285|ref|YP_001938070.1| hypothetical protein OTT_1378 [Orientia tsutsugamushi str. Ikeda]
gi|226734131|sp|B3CTY9.1|Y1378_ORITI RecName: Full=Probable transcriptional regulatory protein OTT_1378
gi|189181056|dbj|BAG40836.1| hypothetical protein OTT_1378 [Orientia tsutsugamushi str. Ikeda]
Length = 249
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D++KA LF +L +++ L+ K G D N RL + I K ++
Sbjct: 2 AGHSKFKNIQHRKGAQDKKKAKLFASLVREISLSAK--SGADIQYNPRLRAAISAAKFNN 59
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P IE AI N +N Y E++ + +G A +V A++
Sbjct: 60 LPKDRIEKAIAHANNKDNYENYFEITY----------EGIIFDGIAIIVEALT 102
>gi|282855632|ref|ZP_06264946.1| DNA-binding regulatory protein, YebC/PmpR family [Pyramidobacter
piscolens W5455]
gi|282586562|gb|EFB91816.1| DNA-binding regulatory protein, YebC/PmpR family [Pyramidobacter
piscolens W5455]
Length = 251
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KAA+D +K L K + +A KEGGG DP N RL + ++ + +S
Sbjct: 2 SGHSKWANIKHRKAAQDSKKGNERQKLIKMIIIAAKEGGG-DPGMNVRLKAALERARAAS 60
Query: 88 MPMTTIENAIK 98
+P TI AIK
Sbjct: 61 VPNDTITRAIK 71
>gi|157828650|ref|YP_001494892.1| hypothetical protein A1G_04400 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|378721464|ref|YP_005286351.1| hypothetical protein RPL_04365 [Rickettsia rickettsii str.
Colombia]
gi|378722814|ref|YP_005287700.1| hypothetical protein RPO_04385 [Rickettsia rickettsii str. Arizona]
gi|378724168|ref|YP_005289052.1| hypothetical protein RPM_04355 [Rickettsia rickettsii str. Hauke]
gi|379016279|ref|YP_005292514.1| hypothetical protein RPN_02575 [Rickettsia rickettsii str. Brazil]
gi|379017955|ref|YP_005294190.1| hypothetical protein RPJ_04340 [Rickettsia rickettsii str. Hino]
gi|379712531|ref|YP_005300870.1| hypothetical protein RSA_04325 [Rickettsia philipii str. 364D]
gi|166227257|sp|A8GSK9.1|Y4400_RICRS RecName: Full=Probable transcriptional regulatory protein A1G_04400
gi|157801131|gb|ABV76384.1| hypothetical protein A1G_04400 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|376324803|gb|AFB22043.1| hypothetical protein RPN_02575 [Rickettsia rickettsii str. Brazil]
gi|376326488|gb|AFB23727.1| hypothetical protein RPL_04365 [Rickettsia rickettsii str.
Colombia]
gi|376327838|gb|AFB25076.1| hypothetical protein RPO_04385 [Rickettsia rickettsii str. Arizona]
gi|376329176|gb|AFB26413.1| hypothetical protein RSA_04325 [Rickettsia philipii str. 364D]
gi|376330521|gb|AFB27757.1| hypothetical protein RPJ_04340 [Rickettsia rickettsii str. Hino]
gi|376333183|gb|AFB30416.1| hypothetical protein RPM_04355 [Rickettsia rickettsii str. Hauke]
Length = 253
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV-SLEGSACLVSAMSRVRFPP 146
+P I+ A+ S N N Y E+ + P IA +V +L + +A R F
Sbjct: 62 LPKERIDKALNSANESSNNENYTEIRYEGYAPN-GIAIIVEALTDNKNRTAAEVRSSFTK 120
Query: 147 ---------SANFISNRLGLFLECSEPITRMKQASVLLAT--ALAHNVF 184
S N++ N G+ PI VL A A H++
Sbjct: 121 YGGSLGETGSVNYLFNHCGV---IQYPINIASNEDVLEAVIEAGGHDII 166
>gi|165933367|ref|YP_001650156.1| hypothetical protein RrIowa_0924 [Rickettsia rickettsii str. Iowa]
gi|165908454|gb|ABY72750.1| hypothetical cytosolic protein [Rickettsia rickettsii str. Iowa]
Length = 295
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
+ AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + +
Sbjct: 41 INMAGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAAR 100
Query: 85 KSSMPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
++P I+ A+ S N N Y E+ + P G A +V A++
Sbjct: 101 SQNLPKERIDKALNSANESSNNENYTEIRYEGYAPN----------GIAIIVEALT 146
>gi|407804370|ref|ZP_11151194.1| hypothetical protein S7S_03430 [Alcanivorax sp. W11-5]
gi|407021663|gb|EKE33427.1| hypothetical protein S7S_03430 [Alcanivorax sp. W11-5]
Length = 246
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D + +FT L +++ +A + GG +PN N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDARRGKIFTKLIREITVAARL-GGPEPNDNPRLRAVVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
M TI+ AIK ++ E+S + P G A LV M+
Sbjct: 61 MTRDTIDRAIKRGIGSDDGASMDEISYEGYGPG----------GVAVLVETMT 103
>gi|350273585|ref|YP_004884898.1| hypothetical protein RJP_0550 [Rickettsia japonica YH]
gi|348592798|dbj|BAK96759.1| hypothetical protein RJP_0550 [Rickettsia japonica YH]
Length = 295
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
+ AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + +
Sbjct: 41 INMAGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAAR 100
Query: 85 KSSMPMTTIENAIKSCNVPENIYGYLEL 112
++P I+ AI S N N Y E+
Sbjct: 101 SQNLPKERIDKAINSANDSSNTENYTEI 128
>gi|300087333|ref|YP_003757855.1| hypothetical protein Dehly_0207 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527066|gb|ADJ25534.1| protein of unknown function DUF28 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 250
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT LS+++ L+ K+ GG DP N RL + + +
Sbjct: 2 SGHSKWATIKHQKGAADAKRGQLFTKLSREIILSAKD-GGPDPAMNARLRLAVQKARDAR 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK + EL+ + P G A LV A+S R
Sbjct: 61 MPSDNIERAIKKGSGQLEGETLFELTLEGYGPG----------GVAILVQAVSDNR 106
>gi|353238343|emb|CCA70292.1| hypothetical protein PIIN_04231 [Piriformospora indica DSM 11827]
Length = 308
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
V Y+GH+KW IRH KA +D +K L++ L+K + +A GG DP TN +LA+ I K
Sbjct: 47 VLYSGHNKWSKIRHNKAIQDSKKNVLYSRLAKDILIAATVGGSADPTTNLQLATMIKRVK 106
Query: 85 KSSMPMTTIENAI 97
+P +E A+
Sbjct: 107 SLGLPKANLERAL 119
>gi|343492641|ref|ZP_08731001.1| hypothetical protein VINI7043_25192 [Vibrio nigripulchritudo ATCC
27043]
gi|342826958|gb|EGU61359.1| hypothetical protein VINI7043_25192 [Vibrio nigripulchritudo ATCC
27043]
Length = 247
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH KAA+D ++ +FT L +++ +A KE GG +P N RL + ID ++
Sbjct: 2 AGHSKWANIRHRKAAQDAKRGKIFTKLIREIVVAAKE-GGAEPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ A+
Sbjct: 61 MTRDTVNRAV 70
>gi|384920379|ref|ZP_10020389.1| hypothetical protein C357_14601 [Citreicella sp. 357]
gi|384465776|gb|EIE50311.1| hypothetical protein C357_14601 [Citreicella sp. 357]
Length = 246
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +A LF+ SK++ +A K G DP+ N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDAVRAKLFSKFSKEITIAAK-MGDPDPDKNPRLRLAVKEAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK E Y E+ + P G A +V AM+ R +
Sbjct: 61 MPKDNIERAIKKAIGGEG-DDYEEIRYEGYGPN----------GVAVIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|291536143|emb|CBL09255.1| conserved hypothetical protein TIGR01033 [Roseburia intestinalis
M50/1]
Length = 242
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVK+ GG DP N++LA I K S+
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTIIGREIAVAVKD-GGPDPANNFKLAQVIAKAKASN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK + N Y + + P+ G+A +V ++ + +
Sbjct: 61 MPNDTIERGIKKASGEGNSVNYEYCTYEGYGPS----------GTAIIVKCLTDNKNRTA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|138896161|ref|YP_001126614.1| hypothetical protein GTNG_2524 [Geobacillus thermodenitrificans
NG80-2]
gi|196250115|ref|ZP_03148809.1| protein of unknown function DUF28 [Geobacillus sp. G11MC16]
gi|166228394|sp|A4IRB5.1|Y2524_GEOTN RecName: Full=Probable transcriptional regulatory protein GTNG_2524
gi|134267674|gb|ABO67869.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
gi|196210299|gb|EDY05064.1| protein of unknown function DUF28 [Geobacillus sp. G11MC16]
Length = 247
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP N L I+ K ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKNGGG-DPAANPSLRLVIEKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P +V L + +A R F +
Sbjct: 61 MPGENIERAIKKATGNQEHTNYEEIRYEGYGPGGVAVMVVCLTDNKNRTAANVRSAFSKN 120
Query: 148 A 148
Sbjct: 121 G 121
>gi|84501557|ref|ZP_00999729.1| hypothetical protein OB2597_15185 [Oceanicola batsensis HTCC2597]
gi|84390178|gb|EAQ02737.1| hypothetical protein OB2597_15185 [Oceanicola batsensis HTCC2597]
Length = 246
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ LSK++ +A K G DP+ N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKLSKEITVAAKM-GDPDPDKNPRLRLAVKEAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
+P IE AIK + Y E+ + P G A +V AM+ R +
Sbjct: 61 VPKDVIERAIKKSQAGDG-DDYEEIRYEGYGPN----------GVAVIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|221633116|ref|YP_002522341.1| hypothetical protein trd_1132 [Thermomicrobium roseum DSM 5159]
gi|254799948|sp|B9L0R1.1|Y1132_THERP RecName: Full=Probable transcriptional regulatory protein
trd_1132
gi|221156042|gb|ACM05169.1| conserved hypothetical protein TIGR01033 [Thermomicrobium roseum
DSM 5159]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ K A D K +F+ L++++ +AV+E GG +P TN RL I+ ++
Sbjct: 2 AGHSKWAQIKRQKQAADFRKGQIFSKLAREIHVAVRE-GGPNPETNVRLRMAIERARREG 60
Query: 88 MPMTTIEN 95
MP TIEN
Sbjct: 61 MPKDTIEN 68
>gi|149248236|ref|XP_001528505.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448459|gb|EDK42847.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 292
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 8 LGVYKVHRLIPDEGYLLVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGG 67
+GV++++ +P Y +R+AGHSKW NIRH KA D +K+ T +S K+ V+ GG
Sbjct: 11 VGVFRLNYRLPLASYQGLRFAGHSKWSNIRHDKAKNDAKKSKEATLISDKIASCVR-TGG 69
Query: 68 TDPNTNYRLASTIDYCKKSSMPMTTIENAIK 98
D N N L S I+ KK ++ T I+ AIK
Sbjct: 70 VDGNAN--LESLIERAKKLNVSKTVIQGAIK 98
>gi|402311569|ref|ZP_10830510.1| DNA-binding regulatory protein, YebC/PmpR family [Lachnospiraceae
bacterium ICM7]
gi|404482378|ref|ZP_11017605.1| YebC/PmpR family DNA-binding regulatory protein [Clostridiales
bacterium OBRC5-5]
gi|400371741|gb|EJP24691.1| DNA-binding regulatory protein, YebC/PmpR family [Lachnospiraceae
bacterium ICM7]
gi|404344539|gb|EJZ70896.1| YebC/PmpR family DNA-binding regulatory protein [Clostridiales
bacterium OBRC5-5]
Length = 242
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DPN N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGPDPNNNSRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
+P TIE IK S N +N Y GY
Sbjct: 61 VPNDTIERGIKKAAGDVNSVNYEQNTYEGY 90
>gi|256371999|ref|YP_003109823.1| hypothetical protein Afer_1219 [Acidimicrobium ferrooxidans DSM
10331]
gi|256008583|gb|ACU54150.1| protein of unknown function DUF28 [Acidimicrobium ferrooxidans
DSM 10331]
Length = 250
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D+ + LF L +++++A +EGGG D + N L + + + +S
Sbjct: 2 SGHSKWATIKHKKGAVDKARGKLFAKLIRQIEVAAREGGG-DTSANATLRTMVQKARDAS 60
Query: 88 MPMTTIENAIK 98
+P TIE AIK
Sbjct: 61 VPQATIERAIK 71
>gi|269926074|ref|YP_003322697.1| hypothetical protein Tter_0958 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789734|gb|ACZ41875.1| protein of unknown function DUF28 [Thermobaculum terrenum ATCC
BAA-798]
Length = 252
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 31/182 (17%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ K A D K +FT +S+++ +AV++ GG DP NYRL I + +
Sbjct: 2 AGHSKWAQIKRKKEATDARKGQIFTKISREIAVAVRQ-GGPDPEANYRLRLAIQKARSIN 60
Query: 88 MPMTTIENAI-KSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRF 144
MP I+ AI ++ N Y E++ + P G A LV ++ R R
Sbjct: 61 MPADNIKRAIERAAGEGSNATNYEEITYEGYGPA----------GVAVLVETLTDNRNRT 110
Query: 145 PPSANFISNRLG-----------LFLE----CSEPITRMKQASVLLAT--ALAHNVFPVP 187
+ NR G +F E EP + + LA A A +V P+
Sbjct: 111 VSEIRNVFNRSGGRLGESGSVSWIFDEKGLIVVEPDNQHTADDIALAAIEAGAEDVTPLE 170
Query: 188 GG 189
G
Sbjct: 171 DG 172
>gi|313888243|ref|ZP_07821914.1| DNA-binding regulatory protein, YebC/PmpR family [Peptoniphilus
harei ACS-146-V-Sch2b]
gi|312845646|gb|EFR33036.1| DNA-binding regulatory protein, YebC/PmpR family [Peptoniphilus
harei ACS-146-V-Sch2b]
Length = 241
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI++ K +D + +FT L++++ +A KE GG DP+ N L ID K +
Sbjct: 2 SGHSKWNNIKNKKGKEDARRGKIFTKLARQITVAAKE-GGLDPDYNPSLKVAIDKAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRV 142
MP IE AI +N + E+ + P +A +V CL +R
Sbjct: 61 MPNDNIERAIAKAGGGDNDDNFEEIVYEGYGPG-GVAVMVH-----CLTDNRNRT 109
>gi|341583928|ref|YP_004764419.1| hypothetical protein Rh054_04030 [Rickettsia heilongjiangensis 054]
gi|340808154|gb|AEK74742.1| hypothetical protein Rh054_04030 [Rickettsia heilongjiangensis 054]
Length = 253
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
+P I+ AI S N N Y E+
Sbjct: 62 LPKERIDKAINSANDSSNTENYTEI 86
>gi|255280962|ref|ZP_05345517.1| glucose-1-phosphate adenylyltransferase [Bryantella formatexigens
DSM 14469]
gi|255268410|gb|EET61615.1| DNA-binding regulatory protein, YebC/PmpR family [Marvinbryantia
formatexigens DSM 14469]
Length = 242
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTIIGREIAVAVKE-GGPDPANNSRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ IK N Y +S + P G A +V A++ + +
Sbjct: 61 MPNDTIDRGIKKAAGDANAVNYEYVSYEGYGPN----------GIAIIVEALTDNKNRTA 110
Query: 148 ANFIS 152
AN S
Sbjct: 111 ANVRS 115
>gi|383790746|ref|YP_005475320.1| YebC/PmpR family DNA-binding regulatory protein [Spirochaeta
africana DSM 8902]
gi|383107280|gb|AFG37613.1| DNA-binding regulatory protein, YebC/PmpR family [Spirochaeta
africana DSM 8902]
Length = 247
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW IRH K A D ++ +F+ L K++ +A + GGG DP++N RL + I+ + +
Sbjct: 2 SGHSKWATIRHKKGALDAKRGKIFSKLIKEITVAARLGGG-DPDSNPRLRTAINKARAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSR 141
MP +E AIK Y E+ + P +A LV CL +R
Sbjct: 61 MPKDNVERAIKKGTGDLEGVDYTEMMYEGYGPG-GVAILVD-----CLTDNKNR 108
>gi|312110084|ref|YP_003988400.1| hypothetical protein GY4MC1_0976 [Geobacillus sp. Y4.1MC1]
gi|336234508|ref|YP_004587124.1| hypothetical protein Geoth_1046 [Geobacillus thermoglucosidasius
C56-YS93]
gi|311215185|gb|ADP73789.1| protein of unknown function DUF28 [Geobacillus sp. Y4.1MC1]
gi|335361363|gb|AEH47043.1| protein of unknown function DUF28 [Geobacillus thermoglucosidasius
C56-YS93]
Length = 246
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP N L ++ + ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKTGGG-DPAANPALRLAVEKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P +V L + ++ RV F +
Sbjct: 61 MPNENIERAIKKATGSQEQTNYEEVRYEGYGPGGVAVMVVCLTDNKNRTASNVRVAFSKN 120
Query: 148 A---------NFISNRLGLFL 159
+++ +R GL +
Sbjct: 121 GGNLGEAGCVSYLFDRKGLLV 141
>gi|398311640|ref|ZP_10515114.1| hypothetical protein BmojR_20127 [Bacillus mojavensis RO-H-1]
Length = 239
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A K+GG DP N L I+ K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKQGGA-DPEANSALRLVIEKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRV 142
MP I+ A+K ++ Y E++ + P+ IA +V CL +R
Sbjct: 61 MPNENIDRALKKAAGSQDDSSYEEITYEGYGPS-GIAVMVE-----CLTDNKNRT 109
>gi|254448972|ref|ZP_05062426.1| conserved hypothetical protein TIGR01033 [gamma proteobacterium
HTCC5015]
gi|198261366|gb|EDY85657.1| conserved hypothetical protein TIGR01033 [gamma proteobacterium
HTCC5015]
Length = 247
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A D ++ +FT L K++ +A + GGG D ++N RL ID S
Sbjct: 2 AGHSKWANIQHRKKAVDAKRGKIFTKLVKEITVAARMGGG-DTDSNPRLRLAIDKALGQS 60
Query: 88 MPMTTIENAIK 98
MP IE A+K
Sbjct: 61 MPKDNIERAVK 71
>gi|373468587|ref|ZP_09559834.1| DNA-binding regulatory protein, YebC/PmpR family [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371766050|gb|EHO54330.1| DNA-binding regulatory protein, YebC/PmpR family [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 242
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DPN N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGPDPNNNSRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
+P TIE IK S N +N Y GY
Sbjct: 61 VPNDTIERGIKKAAGDVNSVNYEQNTYEGY 90
>gi|312622889|ref|YP_004024502.1| hypothetical protein Calkro_1837 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203356|gb|ADQ46683.1| protein of unknown function DUF28 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 243
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K D +K LFT L ++L + V + G DP TN +L I K ++
Sbjct: 2 AGHSKWANIKHKKEKTDAQKGKLFTKLGREL-MVVAKMYGPDPETNPKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MPM I IK + GY +++ + P G A +V AM+ R
Sbjct: 61 MPMDKIMGFIKRAAGEIDTTGYEDITYEGYGPG----------GVAVIVEAMTNNR 106
>gi|222528822|ref|YP_002572704.1| hypothetical protein Athe_0816 [Caldicellulosiruptor bescii DSM
6725]
gi|254806618|sp|B9MQH7.1|Y816_ANATD RecName: Full=Probable transcriptional regulatory protein Athe_0816
gi|222455669|gb|ACM59931.1| protein of unknown function DUF28 [Caldicellulosiruptor bescii DSM
6725]
Length = 243
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K D +K LFT L ++L + V + G DP TN +L I K ++
Sbjct: 2 AGHSKWANIKHKKEKTDAQKGKLFTKLGREL-MVVAKMYGPDPETNPKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MPM I IK + GY +++ + P G A +V AM+ R
Sbjct: 61 MPMDKIMGFIKRAAGEIDTTGYEDITYEGYGPG----------GVAVIVEAMTNNR 106
>gi|15643232|ref|NP_228276.1| hypothetical protein TM0466 [Thermotoga maritima MSB8]
gi|4980974|gb|AAD35550.1|AE001724_8 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 254
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +K+ +FT L +++ +A +EGGG + TN RL + ++ + +
Sbjct: 3 SGHNKWANIKHRKMAQDAKKSKIFTKLIREIIVAAREGGG-NIETNPRLRAAVERARAEN 61
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 62 MPKENIERAIK 72
>gi|110679300|ref|YP_682307.1| hypothetical protein RD1_2018 [Roseobacter denitrificans OCh 114]
gi|118574108|sp|Q168H2.1|Y2018_ROSDO RecName: Full=Probable transcriptional regulatory protein RD1_2018
gi|109455416|gb|ABG31621.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 246
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +A LF+ LSK++ +A K G DP+ N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDAVRAKLFSKLSKEITVAAK-MGDPDPDKNPRLRLAVKEAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP I+ AIK + Y E+ + P G A +V AM+ R
Sbjct: 61 MPKDNIDRAIKKSQAGDGDE-YEEIRYEGYGPN----------GVAVIVEAMTDNR 105
>gi|86143251|ref|ZP_01061653.1| hypothetical protein MED217_08715 [Leeuwenhoekiella blandensis
MED217]
gi|85830156|gb|EAQ48616.1| hypothetical protein MED217_08715 [Leeuwenhoekiella blandensis
MED217]
Length = 254
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCKKS 86
AGHSKW NI+H K A+D+++A FT K++ +A+KE DP++N L + I K
Sbjct: 2 AGHSKWANIKHRKGAQDKKRAKQFTRAIKEITVAIKENNQNGDPDSNPALRNAIQNAKGV 61
Query: 87 SMPMTTIENAIKSC 100
+MP TIE AIK
Sbjct: 62 NMPKDTIERAIKKA 75
>gi|312794064|ref|YP_004026987.1| hypothetical protein Calkr_1895 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344996552|ref|YP_004798895.1| hypothetical protein Calla_1298 [Caldicellulosiruptor lactoaceticus
6A]
gi|312181204|gb|ADQ41374.1| protein of unknown function DUF28 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343964771|gb|AEM73918.1| UPF0082 protein yeeN [Caldicellulosiruptor lactoaceticus 6A]
Length = 243
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K D +K LFT L ++L + V + G DP TN +L I K ++
Sbjct: 2 AGHSKWANIKHKKEKTDAQKGKLFTKLGREL-MVVAKMYGPDPETNPKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MPM I IK + GY +++ + P G A +V AM+ R
Sbjct: 61 MPMDKIMGFIKRAAGEIDTTGYEDITYEGYGPG----------GVAVIVEAMTNNR 106
>gi|301632143|ref|XP_002945150.1| PREDICTED: UPF0082 protein Ajs_1898-like [Xenopus (Silurana)
tropicalis]
Length = 306
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 16/134 (11%)
Query: 14 HRLIPDEGYLLVRY-AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNT 72
H ++ G+ R+ AGHSKW NI+H K +D+++ ++T + +++ +A ++GGG DP T
Sbjct: 50 HAVVDVLGFARGRFVAGHSKWANIQHRKGRQDEKRGKVWTRIIREIMVAARQGGG-DPMT 108
Query: 73 NYRLASTIDYCKKSSMPMTTIE-NAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEG 131
N RL ID K ++MP I+ N K+ E + Y E+ + + G
Sbjct: 109 NPRLRLAIDKAKAANMPTDNIKRNVDKATGNLEGVV-YEEIRYEGY----------GIGG 157
Query: 132 SACLVSAMS--RVR 143
+A +V M+ RVR
Sbjct: 158 AAIIVDTMTDNRVR 171
>gi|403252203|ref|ZP_10918513.1| hypothetical protein EMP_00422 [Thermotoga sp. EMP]
gi|418045360|ref|ZP_12683456.1| protein of unknown function DUF28 [Thermotoga maritima MSB8]
gi|33517115|sp|Q9WYT7.2|Y466_THEMA RecName: Full=Probable transcriptional regulatory protein TM_0466
gi|351678442|gb|EHA61589.1| protein of unknown function DUF28 [Thermotoga maritima MSB8]
gi|402812216|gb|EJX26695.1| hypothetical protein EMP_00422 [Thermotoga sp. EMP]
Length = 253
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +K+ +FT L +++ +A +EGGG + TN RL + ++ + +
Sbjct: 2 SGHNKWANIKHRKMAQDAKKSKIFTKLIREIIVAAREGGG-NIETNPRLRAAVERARAEN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKENIERAIK 71
>gi|423719124|ref|ZP_17693306.1| hypothetical protein GT20_0872 [Geobacillus thermoglucosidans
TNO-09.020]
gi|383368027|gb|EID45302.1| hypothetical protein GT20_0872 [Geobacillus thermoglucosidans
TNO-09.020]
Length = 246
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ LF L+K++ +A K GGG DP N L ++ + ++
Sbjct: 2 AGHSKWKNIQRRKNAQDAKRGKLFMKLAKEIYVAAKTGGG-DPAANPALRLAVEKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y E+ + P +V L + ++ RV F +
Sbjct: 61 MPNENIERAIKKVTGSQEQTNYEEVRYEGYGPGGVAVMVVCLTDNKNRTASNVRVAFSKN 120
Query: 148 A---------NFISNRLGLFL 159
+++ +R GL +
Sbjct: 121 GGNLGEAGCVSYLFDRKGLLV 141
>gi|238023201|ref|ZP_04603627.1| hypothetical protein GCWU000324_03128 [Kingella oralis ATCC 51147]
gi|237865584|gb|EEP66724.1| hypothetical protein GCWU000324_03128 [Kingella oralis ATCC 51147]
Length = 241
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D ++ +FT L K++ +A K+GGG DP +N RL +D ++
Sbjct: 2 AGHSKWANIQHKKARVDAQRGKIFTKLIKEITVAAKQGGG-DPASNPRLRLAMDKAWDAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVDYVEL 85
>gi|206889587|ref|YP_002249658.1| hypothetical protein THEYE_A1868 [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|226696157|sp|B5YHS2.1|Y1868_THEYD RecName: Full=Probable transcriptional regulatory protein
THEYE_A1868
gi|206741525|gb|ACI20582.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 251
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+H KA D +K +FT L K++ +A + GGG DP N RL I+ ++ +
Sbjct: 2 AGHSKWAQIKHKKAQVDAKKGKIFTKLVKEISVAARLGGG-DPEKNPRLRVAIEKAREVN 60
Query: 88 MPMTTIENAI 97
MPM I+ AI
Sbjct: 61 MPMDNIKRAI 70
>gi|170288270|ref|YP_001738508.1| hypothetical protein TRQ2_0469 [Thermotoga sp. RQ2]
gi|226706222|sp|B1L927.1|Y469_THESQ RecName: Full=Probable transcriptional regulatory protein
TRQ2_0469
gi|170175773|gb|ACB08825.1| protein of unknown function DUF28 [Thermotoga sp. RQ2]
Length = 253
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +K+ +FT L +++ +A +EGGG + TN RL + ++ + +
Sbjct: 2 SGHNKWANIKHRKMAQDAKKSKIFTKLIREIIVAAREGGG-NIETNPRLRAAVERARAEN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKENIERAIK 71
>gi|405982781|ref|ZP_11041092.1| YebC/PmpR family DNA-binding regulatory protein [Slackia
piriformis YIT 12062]
gi|404389490|gb|EJZ84566.1| YebC/PmpR family DNA-binding regulatory protein [Slackia
piriformis YIT 12062]
Length = 265
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA+D +++ LF+ LS+ + +A KEGG +P N LA+ I+ K S
Sbjct: 2 SGHSKWATTKHRKAAQDAKRSALFSKLSRNITVAAKEGGDPNPANNASLAAAIEKAKGYS 61
Query: 88 MPMTTIENAI 97
+P I+ AI
Sbjct: 62 LPKDKIKTAI 71
>gi|312128076|ref|YP_003992950.1| hypothetical protein Calhy_1871 [Caldicellulosiruptor
hydrothermalis 108]
gi|311778095|gb|ADQ07581.1| protein of unknown function DUF28 [Caldicellulosiruptor
hydrothermalis 108]
Length = 243
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NIRH K D +K LFT L ++L + V + G DP TN +L I K ++
Sbjct: 2 SGHSKWANIRHKKEKTDAQKGRLFTKLGREL-MVVAKMYGPDPETNPKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MPM I IK + GY +++ + P G A +V AM+ R
Sbjct: 61 MPMDKIMGFIKRAAGEIDTTGYEDITYEGYGPG----------GVAVIVEAMTNNR 106
>gi|285808233|gb|ADC35767.1| hypothetical protein [uncultured bacterium 293]
Length = 250
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT + +++ +A + GGG DP++N RL + +D K S+
Sbjct: 2 SGHSKWATIKHKKGALDAKRGKVFTKIIREMTIAARIGGG-DPDSNPRLRTAVDKAKASN 60
Query: 88 MPMTTIENAIK 98
MP I+ AI+
Sbjct: 61 MPADNIKRAIQ 71
>gi|188996624|ref|YP_001930875.1| hypothetical protein SYO3AOP1_0685 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|226708017|sp|B2V8P8.1|Y685_SULSY RecName: Full=Probable transcriptional regulatory protein
SYO3AOP1_0685
gi|188931691|gb|ACD66321.1| protein of unknown function DUF28 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 251
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS+W NI++ KA D K +FT + K++ +A + GGG DP N RL I+ K+ +
Sbjct: 2 AGHSRWHNIKNKKAKADAIKGRMFTKVIKEITIAARLGGG-DPEANPRLRIAIEKAKEVN 60
Query: 88 MPMTTIENAIK 98
MPM +E AIK
Sbjct: 61 MPMENVERAIK 71
>gi|302871408|ref|YP_003840044.1| hypothetical protein COB47_0745 [Caldicellulosiruptor obsidiansis
OB47]
gi|302574267|gb|ADL42058.1| protein of unknown function DUF28 [Caldicellulosiruptor obsidiansis
OB47]
Length = 243
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NIRH K D +K LFT L ++L + V + G DP TN +L I K ++
Sbjct: 2 SGHSKWANIRHKKEKTDAQKGRLFTKLGREL-MVVAKMYGPDPETNPKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MPM I IK + GY +++ + P G A +V AM+ R
Sbjct: 61 MPMDKIMGFIKRAAGEIDTTGYEDITYEGYGPG----------GVAVIVEAMTNNR 106
>gi|118602417|ref|YP_903632.1| hypothetical protein Rmag_0394 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166229060|sp|A1AW54.1|Y394_RUTMC RecName: Full=Probable transcriptional regulatory protein Rmag_0394
gi|118567356|gb|ABL02161.1| protein of unknown function DUF28 [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 246
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT L K++ ++ K GGG N N+ L ID +
Sbjct: 2 AGHSKWHNIQHRKGAQDAKRGKIFTKLIKEIVISAKIGGGRIEN-NHSLKIIIDKALAVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TIENA+K N + Y ++ + SL G+A +V +S R
Sbjct: 61 MRRNTIENAVKRGNGDFDGNNYEKIRYEGY----------SLGGTAIMVDCLSDNR 106
>gi|363899489|ref|ZP_09325998.1| hypothetical protein HMPREF9625_00658 [Oribacterium sp. ACB1]
gi|395208523|ref|ZP_10397764.1| DNA-binding regulatory protein, YebC/PmpR family [Oribacterium sp.
ACB8]
gi|361958529|gb|EHL11828.1| hypothetical protein HMPREF9625_00658 [Oribacterium sp. ACB1]
gi|394706104|gb|EJF13628.1| DNA-binding regulatory protein, YebC/PmpR family [Oribacterium sp.
ACB8]
Length = 246
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NIR K D K +FT + +L LAVK+ GG DPN+N +L I K ++
Sbjct: 2 SGHSKFSNIRAKKEKNDAAKGKIFTIIGHELALAVKQ-GGADPNSNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP TI+N IK + Y EL
Sbjct: 61 MPNDTIQNGIKKAAGALDSVNYEEL 85
>gi|258653559|ref|YP_003202715.1| hypothetical protein Namu_3398 [Nakamurella multipartita DSM
44233]
gi|258556784|gb|ACV79726.1| protein of unknown function DUF28 [Nakamurella multipartita DSM
44233]
Length = 255
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAAKD ++ LF L K +++A + GGG DP+ N L I KKSS
Sbjct: 2 SGHSKWATTKHQKAAKDAKRGKLFAKLIKNIEVAARTGGG-DPDGNPTLYDAIQKAKKSS 60
Query: 88 MPMTTIENAIK 98
+P I+ A+K
Sbjct: 61 VPNENIDRALK 71
>gi|299822805|ref|ZP_07054691.1| glucose-1-phosphate adenylyltransferase [Listeria grayi DSM 20601]
gi|299816334|gb|EFI83572.1| glucose-1-phosphate adenylyltransferase [Listeria grayi DSM 20601]
Length = 245
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 24 LVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYC 83
++ +GHSKW NI+ K A+D ++A F ++K+L +A K GG DP+ N L +D
Sbjct: 1 MIMMSGHSKWNNIQGRKNAQDAKRAKTFQKIAKELYVAAK--GGADPDMNPSLRLVMDKA 58
Query: 84 KKSSMPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV-SLEGSACLVSAMSRV 142
K ++MP I+ AI Y E++ + P +A LV +L + S RV
Sbjct: 59 KAANMPNDNIKRAIDKATGANATENYEEVTYEGYGPA-GVAVLVHALTDNKNRTSTNVRV 117
Query: 143 RFPP---------SANFISNRLGLFLECSEPITRMKQASVLLAT--ALAHNVFPVP 187
F + N++ +R G +L T +++ + +L A A +VF P
Sbjct: 118 GFNKNGGSLGETGTVNYLFDRKG-YLVIERTDTEVEEDNFMLEAIEAGAEDVFVYP 172
>gi|125974565|ref|YP_001038475.1| hypothetical protein Cthe_2075 [Clostridium thermocellum ATCC
27405]
gi|256004074|ref|ZP_05429059.1| protein of unknown function DUF28 [Clostridium thermocellum DSM
2360]
gi|281419090|ref|ZP_06250107.1| protein of unknown function DUF28 [Clostridium thermocellum JW20]
gi|385780004|ref|YP_005689169.1| hypothetical protein Clo1313_2734 [Clostridium thermocellum DSM
1313]
gi|419721349|ref|ZP_14248513.1| UPF0082 protein yeeN [Clostridium thermocellum AD2]
gi|419726873|ref|ZP_14253893.1| UPF0082 protein yeeN [Clostridium thermocellum YS]
gi|166227516|sp|A3DH53.1|Y2075_CLOTH RecName: Full=Probable transcriptional regulatory protein Cthe_2075
gi|125714790|gb|ABN53282.1| protein of unknown function DUF28 [Clostridium thermocellum ATCC
27405]
gi|255991997|gb|EEU02094.1| protein of unknown function DUF28 [Clostridium thermocellum DSM
2360]
gi|281407239|gb|EFB37500.1| protein of unknown function DUF28 [Clostridium thermocellum JW20]
gi|316941684|gb|ADU75718.1| protein of unknown function DUF28 [Clostridium thermocellum DSM
1313]
gi|380769838|gb|EIC03738.1| UPF0082 protein yeeN [Clostridium thermocellum YS]
gi|380782519|gb|EIC12153.1| UPF0082 protein yeeN [Clostridium thermocellum AD2]
Length = 242
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K D +K +FT + +++ + VK+ GG DP N +L I K ++
Sbjct: 2 AGHSKWANIKHKKQKTDAQKGKIFTKIGREIAIVVKQ-GGPDPEVNSKLKDVIAKAKAAN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
MP TI +IK S N E +Y GY
Sbjct: 61 MPNETIMRSIKKAAGEVDSTNYEEVVYEGY 90
>gi|376295813|ref|YP_005167043.1| hypothetical protein DND132_1026 [Desulfovibrio desulfuricans
ND132]
gi|323458374|gb|EGB14239.1| protein of unknown function DUF28 [Desulfovibrio desulfuricans
ND132]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCKKS 86
+GHSKW NI+H K +D +KA FT +K + LA K GGG D N+ RLA I K
Sbjct: 2 SGHSKWANIQHRKGRQDAKKAKFFTKAAKDIILAAKAGGGNPDDNSTLRLA--IQKAKAV 59
Query: 87 SMPMTTIENAIK 98
++P IENAIK
Sbjct: 60 NLPKDRIENAIK 71
>gi|374621787|ref|ZP_09694317.1| hypothetical protein ECTPHS_02154 [Ectothiorhodospira sp. PHS-1]
gi|373940918|gb|EHQ51463.1| hypothetical protein ECTPHS_02154 [Ectothiorhodospira sp. PHS-1]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L K++ +A + GG+DP TN RL +D ++
Sbjct: 2 AGHSKWANIQHRKNAQDAKRGKLFTKLIKEITVAARM-GGSDPATNPRLRLAVDKALDAN 60
Query: 88 MPMTTIENAIK 98
M TIE A K
Sbjct: 61 MTKDTIERATK 71
>gi|331091071|ref|ZP_08339913.1| hypothetical protein HMPREF9477_00556 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405293|gb|EGG84829.1| hypothetical protein HMPREF9477_00556 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 242
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTIIGREIAVAVKE-GGPDPANNSRLRDVIAKAKSNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK N Y ++ + P+ G A +V A++ + +
Sbjct: 61 MPNDTIERGIKKAAGDANSVNYESVTYEGYGPS----------GVAIIVDALTDNKNRTA 110
Query: 148 AN 149
+N
Sbjct: 111 SN 112
>gi|312134701|ref|YP_004002039.1| hypothetical protein Calow_0663 [Caldicellulosiruptor owensensis
OL]
gi|311774752|gb|ADQ04239.1| protein of unknown function DUF28 [Caldicellulosiruptor owensensis
OL]
Length = 243
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NIRH K D +K LFT L ++L + V + G DP TN +L I K ++
Sbjct: 2 SGHSKWANIRHKKEKTDAQKGRLFTKLGREL-MVVAKMYGPDPETNPKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MPM I IK + GY +++ + P G A +V AM+ R
Sbjct: 61 MPMEKIMGFIKRAAGEIDTTGYEDITYEGYGPG----------GVAVIVEAMTNNR 106
>gi|302338524|ref|YP_003803730.1| hypothetical protein Spirs_2014 [Spirochaeta smaragdinae DSM 11293]
gi|301635709|gb|ADK81136.1| protein of unknown function DUF28 [Spirochaeta smaragdinae DSM
11293]
Length = 248
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H K A D ++ FT + K++ +A + GGG DP N RL + + K ++
Sbjct: 2 SGHSKWASIKHKKGAIDAKRGKAFTKIIKEITVAARMGGG-DPEANPRLRTAVLKAKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP +E AIK Y+EL+ + P G A L+ A++ + +
Sbjct: 61 MPKDNVERAIKKGTGDLEGVDYVELTYEAYGPG----------GVAILIDALTDNKNRTA 110
Query: 148 ANFIS 152
A+ S
Sbjct: 111 ADVRS 115
>gi|126729301|ref|ZP_01745115.1| hypothetical protein SSE37_23914 [Sagittula stellata E-37]
gi|126710291|gb|EBA09343.1| hypothetical protein SSE37_23914 [Sagittula stellata E-37]
Length = 248
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ +A +F+ LSK++ +A K G DP N RL + + S
Sbjct: 2 AGHSKWANIQHRKGRQDKLRAKVFSKLSKEITIAAKM-GDPDPEKNPRLRLAVKEARGQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK V + Y E+ + P G A +V M+ R +
Sbjct: 61 MPKDNIERAIKKA-VGGDAEDYEEIRYEGYGPN----------GVAVIVETMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|1183839|dbj|BAA11816.1| unknown [Pseudomonas aeruginosa]
Length = 248
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H + +D +K +FT L ++L +A ++GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHREERQDAKKGKIFTKLIRELTVAARQGGGV-PADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ AI + +ELS + P+ G A +V AM+ R
Sbjct: 61 MTRDTIDRAIARGVGSNDADNMVELSYEGYAPS----------GVAIIVEAMTDNR 106
>gi|331002032|ref|ZP_08325552.1| hypothetical protein HMPREF0491_00414 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411828|gb|EGG91233.1| hypothetical protein HMPREF0491_00414 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 242
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DPN N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGPDPNNNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
+P TIE IK S N NIY GY
Sbjct: 61 VPNDTIERGIKKAAGDVNSVNYEHNIYEGY 90
>gi|148269594|ref|YP_001244054.1| hypothetical protein Tpet_0454 [Thermotoga petrophila RKU-1]
gi|281411688|ref|YP_003345767.1| hypothetical protein Tnap_0248 [Thermotoga naphthophila RKU-10]
gi|166227268|sp|A5IJV5.1|Y454_THEP1 RecName: Full=Probable transcriptional regulatory protein
Tpet_0454
gi|147735138|gb|ABQ46478.1| protein of unknown function DUF28 [Thermotoga petrophila RKU-1]
gi|281372791|gb|ADA66353.1| protein of unknown function DUF28 [Thermotoga naphthophila
RKU-10]
Length = 253
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW NI+H K A+D +K+ +FT L +++ +A +EGGG + TN RL + ++ + +
Sbjct: 2 SGHNKWANIKHRKMAQDAKKSKIFTKLIREIIVAAREGGG-NIETNPRLRAAVEKARAEN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKENIERAIK 71
>gi|428776003|ref|YP_007167790.1| hypothetical protein PCC7418_1378 [Halothece sp. PCC 7418]
gi|428690282|gb|AFZ43576.1| protein of unknown function DUF28 [Halothece sp. PCC 7418]
Length = 252
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +K FT LS+ + +A + GG DP N++L + ID K +S
Sbjct: 2 AGHSKWANIKRQKARVDAKKGKTFTQLSRAIIVAAR-NGGPDPEANFQLRTAIDKAKAAS 60
Query: 88 MPMTTIENAI 97
+P IE AI
Sbjct: 61 IPNDNIERAI 70
>gi|398306569|ref|ZP_10510155.1| hypothetical protein BvalD_14268 [Bacillus vallismortis DV1-F-3]
Length = 240
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K + +A +E GG DP TN L I+ K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKDIYVAARE-GGADPETNSALRLVIEKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPT 120
MP I+ AI+ ++ Y E++ + P+
Sbjct: 61 MPNENIDRAIQKAAGNQDGSSYEEITYEGYGPS 93
>gi|332524158|ref|ZP_08400387.1| hypothetical protein RBXJA2T_00235 [Rubrivivax benzoatilyticus JA2]
gi|332107496|gb|EGJ08720.1| hypothetical protein RBXJA2T_00235 [Rubrivivax benzoatilyticus JA2]
Length = 241
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T + +++ +A ++GGG DPN N RL +D K ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGKIWTRVIREIIVAARQGGG-DPNANPRLRLAVDKAKAAN 60
Query: 88 MPMTTIENAIKSC 100
MP T++ I
Sbjct: 61 MPADTVKRNIDKA 73
>gi|406980566|gb|EKE02148.1| hypothetical protein ACD_20C00419G0011 [uncultured bacterium]
Length = 249
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KA D +K F S+++ +A K GG T P TN+RL + ID K +
Sbjct: 2 SGHSKWANIKHRKAKVDAQKGAAFARFSREIMVAAKTGGAT-PETNFRLRTAIDKAKAAG 60
Query: 88 MPMTTIENAIKSC-------NVPENIY-GY 109
+P I+ A+ N+ E Y GY
Sbjct: 61 LPNDNIKRALDKASGSGAGDNIEEITYEGY 90
>gi|163745948|ref|ZP_02153307.1| hypothetical protein OIHEL45_10188 [Oceanibulbus indolifex HEL-45]
gi|161380693|gb|EDQ05103.1| hypothetical protein OIHEL45_10188 [Oceanibulbus indolifex HEL-45]
Length = 246
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ +A +F+ LSK++ +A K G DP N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDKLRAKVFSKLSKEITIAAK-MGDPDPEKNPRLRMAVKEAKGQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK E Y E+ + P G A +V AM+ R
Sbjct: 61 MPKDNIERAIKKAIGGEG-EDYEEIRYEGYGPN----------GVAVIVEAMTDNR 105
>gi|254362417|ref|ZP_04978526.1| hypothetical protein MHA_2024 [Mannheimia haemolytica PHL213]
gi|261494086|ref|ZP_05990589.1| dATP pyrophosphohydrolase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496073|ref|ZP_05992483.1| dATP pyrophosphohydrolase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|452745061|ref|ZP_21944899.1| hypothetical protein F388_08314 [Mannheimia haemolytica serotype 6
str. H23]
gi|153094006|gb|EDN74922.1| hypothetical protein MHA_2024 [Mannheimia haemolytica PHL213]
gi|261308323|gb|EEY09616.1| dATP pyrophosphohydrolase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261310252|gb|EEY11452.1| dATP pyrophosphohydrolase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|452086901|gb|EME03286.1| hypothetical protein F388_08314 [Mannheimia haemolytica serotype 6
str. H23]
Length = 246
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D ++N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DTSSNPRLRAAVDKALSSN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|406670590|ref|ZP_11077835.1| YebC/PmpR family DNA-binding regulatory protein [Facklamia hominis
CCUG 36813]
gi|405582106|gb|EKB56112.1| YebC/PmpR family DNA-binding regulatory protein [Facklamia hominis
CCUG 36813]
Length = 240
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I++ K A+D +K +F LSK++ A K GGG DP+ N L + +D + ++
Sbjct: 2 SGHNKWSKIKNKKGAEDAKKGAIFGKLSKEIFQAAKNGGG-DPDMNANLRTVLDKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I AIK + Y E++ + P
Sbjct: 61 MPKDNINRAIKKATDAGDTTNYDEITYEGYGP 92
>gi|117923793|ref|YP_864410.1| hypothetical protein Mmc1_0479 [Magnetococcus marinus MC-1]
gi|166227286|sp|A0L4W1.1|Y479_MAGSM RecName: Full=Probable transcriptional regulatory protein
Mmc1_0479
gi|117607549|gb|ABK43004.1| protein of unknown function DUF28 [Magnetococcus marinus MC-1]
Length = 250
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT L K++ ++ + GGG D TN RL S I + +
Sbjct: 2 AGHSKWANIKHRKGAQDAKRGKIFTRLIKEITVSARMGGG-DAATNPRLRSAITAARAQN 60
Query: 88 MPMTTIENAIK 98
+P T++ AIK
Sbjct: 61 LPKDTMDKAIK 71
>gi|322435523|ref|YP_004217735.1| hypothetical protein AciX9_1909 [Granulicella tundricola MP5ACTX9]
gi|321163250|gb|ADW68955.1| protein of unknown function DUF28 [Granulicella tundricola
MP5ACTX9]
Length = 246
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT L K++ +A K GGG DP+ N RL I K +
Sbjct: 2 SGHSKWATIKHKKGATDAKRGKIFTRLIKEITIAAKSGGG-DPDGNPRLRGAIAAAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ AI+ Y E+S + P
Sbjct: 61 MPADNIKRAIQRGTGELEGVSYEEMSYEGYGP 92
>gi|427417414|ref|ZP_18907597.1| DNA-binding regulatory protein, YebC/PmpR family [Leptolyngbya
sp. PCC 7375]
gi|425760127|gb|EKV00980.1| DNA-binding regulatory protein, YebC/PmpR family [Leptolyngbya
sp. PCC 7375]
Length = 254
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D K +F LS+++ +A K GGG DP+ N++L + ID K +
Sbjct: 2 AGHSKWANIKRQKARVDAVKGKVFAKLSREIIVAAKHGGG-DPDGNFQLRTAIDKAKAAG 60
Query: 88 MPMTTIENAI 97
+P I+ AI
Sbjct: 61 VPNDNIDRAI 70
>gi|22297719|ref|NP_680966.1| hypothetical protein tll0175 [Thermosynechococcus elongatus BP-1]
gi|33517024|sp|Q8DME3.1|Y175_THEEB RecName: Full=Probable transcriptional regulatory protein tll0175
gi|22293896|dbj|BAC07728.1| tll0175 [Thermosynechococcus elongatus BP-1]
Length = 250
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +K +F LS+ + +A + GGG DP N++L S I+ K +
Sbjct: 2 AGHSKWANIKRQKARVDAQKGKIFARLSRAIIIAARHGGG-DPAGNFQLRSAIEKAKAAG 60
Query: 88 MPMTTIENAI 97
+P IE AI
Sbjct: 61 IPSENIERAI 70
>gi|260425960|ref|ZP_05779939.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260420452|gb|EEX13703.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 246
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +A LF+ SK++ +A K G DP+ N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDAVRAKLFSKFSKEITIAAK-MGDPDPDKNPRLRLAVKEAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + + Y E+ + P G A +V AM+ R +
Sbjct: 61 MPKDNIERAIKKA-MGGDGDDYEEIRYEGYGPN----------GVAIIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|390957960|ref|YP_006421717.1| YebC/PmpR family DNA-binding regulatory protein [Terriglobus roseus
DSM 18391]
gi|390958300|ref|YP_006422057.1| YebC/PmpR family DNA-binding regulatory protein [Terriglobus roseus
DSM 18391]
gi|390412878|gb|AFL88382.1| DNA-binding regulatory protein, YebC/PmpR family [Terriglobus
roseus DSM 18391]
gi|390413218|gb|AFL88722.1| DNA-binding regulatory protein, YebC/PmpR family [Terriglobus
roseus DSM 18391]
Length = 246
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT L K++ +A K+GGG DP+ N RL + I K +
Sbjct: 2 SGHSKWATIKHKKGAADAKRGKVFTRLIKEITVAAKQGGG-DPDGNPRLRTAILAAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ AI+ Y E++ + P
Sbjct: 61 MPADNIKRAIQRGTGELEGLSYEEITYEGYGP 92
>gi|149914396|ref|ZP_01902927.1| hypothetical protein RAZWK3B_20386 [Roseobacter sp. AzwK-3b]
gi|149811915|gb|EDM71748.1| hypothetical protein RAZWK3B_20386 [Roseobacter sp. AzwK-3b]
Length = 249
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ LSK++ +A K G DP N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKLSKEITVAAK-MGDPDPEKNPRLRMAVKEAKAVS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
+P IE AIK E Y E+ + P G A +V AM+ R +
Sbjct: 61 VPKDVIERAIKKSQAGEG-DDYEEIRYEGYGPG----------GVAVIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|451949073|ref|YP_007469668.1| DNA-binding regulatory protein, YebC/PmpR family [Desulfocapsa
sulfexigens DSM 10523]
gi|451908421|gb|AGF80015.1| DNA-binding regulatory protein, YebC/PmpR family [Desulfocapsa
sulfexigens DSM 10523]
Length = 249
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A D ++ +FT L K++ +A + GGG DP+ N RL S I + +
Sbjct: 2 SGHSKWANIKHKKGAADAKRGKIFTRLIKEITVAARMGGG-DPDGNPRLRSAIVTARAEN 60
Query: 88 MPMTTIENAIK 98
MP I AIK
Sbjct: 61 MPKDNITRAIK 71
>gi|406885961|gb|EKD33063.1| hypothetical protein ACD_76C00095G0001 [uncultured bacterium]
Length = 238
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K+ D ++A +FT L+ + +A +E GG DP+TN++L I+ + ++
Sbjct: 2 SGHSKWHNIQQKKSVSDSKRAQVFTKLANGIVVAAREAGG-DPDTNFKLRMAIEKARSAN 60
Query: 88 MPMTTIENAI 97
MP I+ A+
Sbjct: 61 MPKDNIDRAV 70
>gi|387125915|ref|YP_006294520.1| DNA-binding regulatory protein [Methylophaga sp. JAM1]
gi|386272977|gb|AFI82875.1| DNA-binding regulatory protein [Methylophaga sp. JAM1]
Length = 249
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ +A + GG+DP TN RL + ID S+
Sbjct: 2 AGHSKWANIQHRKGAQDAKRGKLFTRLIREITVAARM-GGSDPATNPRLRAAIDKALGSN 60
Query: 88 MPMTTIENAIK 98
M IE A K
Sbjct: 61 MTKDVIERASK 71
>gi|407697056|ref|YP_006821844.1| hypothetical protein B5T_03234 [Alcanivorax dieselolei B5]
gi|407254394|gb|AFT71501.1| UPF0082 protein [Alcanivorax dieselolei B5]
Length = 243
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L +++ ++ + GGG + N N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIREITVSARMGGG-EINDNPRLRAAVDKALTNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
M TI+ AIK S N+ E Y GY
Sbjct: 61 MTRDTIDRAIKRGAGGDDSANMEEITYEGY 90
>gi|47459026|ref|YP_015888.1| hypothetical protein MMOB1910 [Mycoplasma mobile 163K]
gi|60390913|sp|Q6KI99.1|Y1910_MYCMO RecName: Full=Probable transcriptional regulatory protein MMOB1910
gi|47458354|gb|AAT27677.1| conserved expressed protein [Mycoplasma mobile 163K]
Length = 244
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +F LSK++ +A GG DP TN L + K S
Sbjct: 2 AGHSKWANIKHRKGAQDAARSKIFMKLSKEIFVAASGPGGADPETNPSLRLAVSKAKAQS 61
Query: 88 MPMTTIENAI-KSCNVPENIYGYLEL 112
MP IE A+ K+ +N + EL
Sbjct: 62 MPKANIEKALSKASGNSKNASEFKEL 87
>gi|383759706|ref|YP_005438692.1| hypothetical protein RGE_38540 [Rubrivivax gelatinosus IL144]
gi|381380376|dbj|BAL97193.1| hypothetical protein RGE_38540 [Rubrivivax gelatinosus IL144]
Length = 241
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T + +++ +A ++GGG DPN N RL +D K ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGKVWTRVIREIIVAARQGGG-DPNANPRLRLAVDKAKAAN 60
Query: 88 MPMTTIENAIKSC 100
MP T++ I
Sbjct: 61 MPADTVKRNIDKA 73
>gi|374366982|ref|ZP_09625053.1| hypothetical protein OR16_13789 [Cupriavidus basilensis OR16]
gi|373101429|gb|EHP42479.1| hypothetical protein OR16_13789 [Cupriavidus basilensis OR16]
Length = 241
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA D ++ ++T L K++ +A K GG DP++N RL ++D ++
Sbjct: 2 AGHSKWANIKHKKAAADSKRGKVWTRLIKEITVAAKL-GGADPDSNPRLRLSMDKAMDAN 60
Query: 88 MPMTTIENAIK 98
MP I+ AI+
Sbjct: 61 MPKDNIQRAIQ 71
>gi|389876755|ref|YP_006370320.1| hypothetical protein TMO_0897 [Tistrella mobilis KA081020-065]
gi|388527539|gb|AFK52736.1| hypothetical protein TMO_0897 [Tistrella mobilis KA081020-065]
Length = 249
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS+++NI H KAA+D+++A +FT L ++L +A KE GG DP N RL S + + ++
Sbjct: 2 AGHSQFKNIMHRKAAQDKKRAKVFTKLLRELVIAAKE-GGADPTANPRLRSAVAAARVAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK + Y E+ + P G A +V A++ R
Sbjct: 61 MPKDNIERAIKRGAGGADGDNYEEVRYEGYGPG----------GVALIVEALTDNR 106
>gi|383484117|ref|YP_005393030.1| hypothetical protein MC1_04405 [Rickettsia parkeri str. Portsmouth]
gi|378936471|gb|AFC74971.1| hypothetical protein MC1_04405 [Rickettsia parkeri str. Portsmouth]
Length = 253
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K +D+++A +FT L +++ A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGTQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV-SLEGSACLVSAMSRVRFPP 146
+P I+ AI S N N Y E+ + P IA +V +L + +A R F
Sbjct: 62 LPKGRIDKAINSANDSSNNENYTEIRYEGYAPN-GIAIIVEALTDNKNRTAAEVRSSFTK 120
Query: 147 ---------SANFISNRLGLFLECSEPITRMKQASVLLAT--ALAHNVF 184
S N++ N G+ PI VL A A H++
Sbjct: 121 YGGSLGETGSVNYLFNHCGVI---QYPINIASNEDVLEAVIEAGGHDII 166
>gi|301060228|ref|ZP_07201095.1| DNA-binding regulatory protein, YebC/PmpR family [delta
proteobacterium NaphS2]
gi|300445740|gb|EFK09638.1| DNA-binding regulatory protein, YebC/PmpR family [delta
proteobacterium NaphS2]
Length = 248
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H K A D ++ +FT L K++ +A + GGG DP N RL + I K +
Sbjct: 2 SGHSKWSSIKHKKGAADAKRGKIFTKLIKEITVAARMGGG-DPEGNPRLRTAIAAAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP IE IK Y E S + P GSA LV ++
Sbjct: 61 MPKENIERGIKKGTGELEGVNYEEASYEGYGPG----------GSAVLVDCLT 103
>gi|124022248|ref|YP_001016555.1| hypothetical protein P9303_05381 [Prochlorococcus marinus str.
MIT 9303]
gi|166227319|sp|A2C730.1|Y538_PROM3 RecName: Full=Probable transcriptional regulatory protein
P9303_05381
gi|123962534|gb|ABM77290.1| Uncharacterized conserved protein [Prochlorococcus marinus str.
MIT 9303]
Length = 248
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ KA D ++ +FT L++++ +A + GG DPN N++L + I+ K +
Sbjct: 2 AGHSKWSQIKRSKAVVDAKRGAVFTRLAREISVAARSGG--DPNGNFQLRTAINKAKAAR 59
Query: 88 MPMTTIENAI 97
MP IE AI
Sbjct: 60 MPAANIERAI 69
>gi|409407305|ref|ZP_11255756.1| hypothetical protein GWL_29100 [Herbaspirillum sp. GW103]
gi|386433056|gb|EIJ45882.1| hypothetical protein GWL_29100 [Herbaspirillum sp. GW103]
Length = 241
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T L K++ +A + GGG DP+TN RL +D ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGRVWTRLIKEITVAARMGGG-DPDTNPRLRLAVDRASDAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
MP + AI+ + Y E+ + + G+A +V M+ RVR
Sbjct: 61 MPKDNVTRAIQRGTGALDGVNYEEVRYEGY----------GINGAAIIVDCMTDNRVR 108
>gi|187735215|ref|YP_001877327.1| hypothetical protein Amuc_0709 [Akkermansia muciniphila ATCC
BAA-835]
gi|226708031|sp|B2UQ11.1|Y709_AKKM8 RecName: Full=Probable transcriptional regulatory protein
Amuc_0709
gi|187425267|gb|ACD04546.1| protein of unknown function DUF28 [Akkermansia muciniphila ATCC
BAA-835]
Length = 251
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+++KA +D +K +F + ++ LA K GGG DP+ N RL + ID K S
Sbjct: 2 SGHNKWSKIKYVKAKEDAKKGKVFARFAHEIMLAAKSGGG-DPDLNPRLRAAIDGAKAVS 60
Query: 88 MPMTTIENAIK 98
P IE AIK
Sbjct: 61 TPKENIERAIK 71
>gi|224372670|ref|YP_002607042.1| hypothetical protein NAMH_0626 [Nautilia profundicola AmH]
gi|254806547|sp|B9L8T4.1|Y626_NAUPA RecName: Full=Probable transcriptional regulatory protein NAMH_0626
gi|223589581|gb|ACM93317.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 238
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++HIKA +D +K+ +FT + + A ++GGG +P+TN L ++ K S
Sbjct: 2 AGHNKWSKVKHIKAKEDAKKSKIFTKHVRAIMTAARQGGG-NPDTNAALRLAVERAKADS 60
Query: 88 MPMTTIENAIKSC 100
MPM I+ AI
Sbjct: 61 MPMQNIQRAIDKA 73
>gi|381210473|ref|ZP_09917544.1| hypothetical protein LGrbi_11146 [Lentibacillus sp. Grbi]
Length = 243
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K A+D +K +F +K + A KEGGG D + N L + +D K +
Sbjct: 2 AGHSKWHNIQRRKNAQDAKKGKIFMRHAKNIYTAAKEGGG-DMDMNATLRTAVDKAKSDN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP IE AIK + Y E++ + P
Sbjct: 61 MPNDNIERAIKKATGDLDGVHYEEITYEGYGP 92
>gi|300312851|ref|YP_003776943.1| hypothetical protein Hsero_3556 [Herbaspirillum seropedicae SmR1]
gi|124483624|emb|CAM32685.1| Conserved Hypothetical [Herbaspirillum seropedicae]
gi|300075636|gb|ADJ65035.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 241
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T L K++ +A + GGG DP+TN RL +D ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGRVWTRLIKEITVAARMGGG-DPDTNPRLRLAVDRASDAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
MP + AI+ + Y E+ + + G+A +V M+ RVR
Sbjct: 61 MPKDNVTRAIQRGTGALDGVNYEEVRYEGY----------GINGAAIIVDCMTDNRVR 108
>gi|206896191|ref|YP_002247236.1| hypothetical protein COPRO5265_0905 [Coprothermobacter
proteolyticus DSM 5265]
gi|226696017|sp|B5Y8Y9.1|Y905_COPPD RecName: Full=Probable transcriptional regulatory protein
COPRO5265_0905
gi|206738808|gb|ACI17886.1| conserved hypothetical protein [Coprothermobacter proteolyticus
DSM 5265]
Length = 248
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K+ D ++ +FT L+++L +A +E GG +P+TN RL ID + ++
Sbjct: 2 SGHSKWHNIKAKKSKMDAQRGKIFTKLTRELVIAARE-GGPNPDTNLRLRVAIDKARAAN 60
Query: 88 MPMTTIENAI 97
MP I+ AI
Sbjct: 61 MPKDNIDKAI 70
>gi|62257419|gb|AAX77715.1| unknown protein [synthetic construct]
Length = 283
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 17 IPDEGYLLVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRL 76
I D+ ++ AGHSKW NI+H KA +D ++ +FT L +++ +A + GGG D + N RL
Sbjct: 17 IDDDDKHMLEMAGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGG-DKDANPRL 75
Query: 77 ASTIDYCKKSSMPMTTIENAI-------KSCNVPENIY-GY 109
+ I ++M TIE A+ +S NV E Y GY
Sbjct: 76 RAAIATALANNMSKDTIERAVVKGAGGDESANVEEVRYEGY 116
>gi|167945706|ref|ZP_02532780.1| hypothetical protein Epers_03860 [Endoriftia persephone
'Hot96_1+Hot96_2']
gi|110589112|gb|ABG77065.1| conserved hypothetical protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 142
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA D+++ ++T L +++ +A + GGG D N RL +D ++
Sbjct: 2 AGHSKWANIKHKKAANDKKRGKIWTKLIREITVAARMGGG-DIGANPRLRLAVDKGLGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP TI+ A+K Y EL + P G+A +V M+ R R
Sbjct: 61 MPKDTIDRAVKRGAGAGEGENYDELRYEGYGPG----------GAAVIVDCMTDNRNRTA 110
Query: 146 PSANFISNRLGLFLECSEPITRM 168
++LG L + M
Sbjct: 111 SEVRHAFSKLGGNLGTDGSVAYM 133
>gi|167535175|ref|XP_001749262.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772415|gb|EDQ86068.1| predicted protein [Monosiga brevicollis MX1]
Length = 214
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK-EGGGTDPNTNYRLASTIDYCKKS 86
AGHSKW NI+H KA +D+ ++ LF L + + +A+K GG +P +N RL + + + +
Sbjct: 32 AGHSKWANIKHQKARQDKSRSILFARLHRDIVIAIKGNGGNANPESNLRLKTALAAARNA 91
Query: 87 SMPMTTIENAIK 98
MP IE A++
Sbjct: 92 DMPKDKIEGALR 103
>gi|33151784|ref|NP_873137.1| hypothetical protein HD0596 [Haemophilus ducreyi 35000HP]
gi|49036530|sp|Q7VNF3.1|Y596_HAEDU RecName: Full=Probable transcriptional regulatory protein HD_0596
gi|33148005|gb|AAP95526.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 246
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N RL S +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVAANPRLRSAVDKALSSN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|33863690|ref|NP_895250.1| hypothetical protein PMT1423 [Prochlorococcus marinus str. MIT
9313]
gi|49036529|sp|Q7V5W3.1|Y1423_PROMM RecName: Full=Probable transcriptional regulatory protein
PMT_1423
gi|33635273|emb|CAE21598.1| Domain of unknown function DUF28 [Prochlorococcus marinus str.
MIT 9313]
Length = 247
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ KA D ++ +FT L++++ +A + GG DPN N++L + I+ K +
Sbjct: 2 AGHSKWSQIKRSKAVVDAKRGAVFTRLAREISVAARSGG--DPNGNFQLRTAINKAKAAR 59
Query: 88 MPMTTIENAI 97
MP IE AI
Sbjct: 60 MPAANIERAI 69
>gi|270307812|ref|YP_003329870.1| hypothetical protein DhcVS_386 [Dehalococcoides sp. VS]
gi|270153704|gb|ACZ61542.1| hypothetical protein DhcVS_386 [Dehalococcoides sp. VS]
Length = 251
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT LS+++ A K+GG + P N RL I K +
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKLSREIIFAAKQGGPS-PEGNARLRLAIQKAKDNR 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK + +E+ + P G A LV+ MS R
Sbjct: 61 MPSDNIERAIKKGSGELEGATVIEMILEGYGPG----------GVAVLVNGMSDNR 106
>gi|304321098|ref|YP_003854741.1| hypothetical protein PB2503_07719 [Parvularcula bermudensis
HTCC2503]
gi|303300000|gb|ADM09599.1| hypothetical protein PB2503_07719 [Parvularcula bermudensis
HTCC2503]
Length = 248
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +++ LF+ LSK++ +A K G DP N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDAKRSKLFSKLSKEITVAAK-MGTPDPEMNPRLRLAVQNAKAQS 60
Query: 88 MPMTTIENAIKSCNVPE 104
MP IE AIK E
Sbjct: 61 MPKDNIERAIKKAESGE 77
>gi|83952635|ref|ZP_00961365.1| hypothetical protein ISM_10795 [Roseovarius nubinhibens ISM]
gi|83835770|gb|EAP75069.1| hypothetical protein ISM_10795 [Roseovarius nubinhibens ISM]
Length = 246
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ L+K++ +A K G DP N RL + K SS
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKLAKEITVAAKM-GDPDPEKNPRLRLAVKEAKSSS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
+P IE AIK + Y E+ + P G A +V AM+ R +
Sbjct: 61 VPKDVIERAIKKA-IGGEAEDYEEIRYEGYGPN----------GVAVIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|118594336|ref|ZP_01551683.1| hypothetical protein MB2181_01670 [Methylophilales bacterium
HTCC2181]
gi|118440114|gb|EAV46741.1| hypothetical protein MB2181_01670 [Methylophilales bacterium
HTCC2181]
Length = 242
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +F+ L+K++ +A + GGG D N N RL S + K+ +
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKIFSKLTKEITVAARMGGG-DINFNPRLRSAVTAAKEEN 60
Query: 88 MPMTTIENAIK 98
MP+ I AIK
Sbjct: 61 MPIDNITRAIK 71
>gi|152979460|ref|YP_001345089.1| hypothetical protein Asuc_1803 [Actinobacillus succinogenes 130Z]
gi|171704379|sp|A6VQA7.1|Y1803_ACTSZ RecName: Full=Probable transcriptional regulatory protein
Asuc_1803
gi|150841183|gb|ABR75154.1| protein of unknown function DUF28 [Actinobacillus succinogenes
130Z]
Length = 247
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DAGSNPRLRAAVDKALASN 60
Query: 88 MPMTTIENAIK 98
M TI AI
Sbjct: 61 MTRDTINRAID 71
>gi|52424765|ref|YP_087902.1| hypothetical protein MS0710 [Mannheimia succiniciproducens MBEL55E]
gi|60390792|sp|Q65UP3.1|Y710_MANSM RecName: Full=Probable transcriptional regulatory protein MS0710
gi|52306817|gb|AAU37317.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 247
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DAGSNPRLRAAVDKALASN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETRIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|83944535|ref|ZP_00956987.1| hypothetical protein EE36_11713 [Sulfitobacter sp. EE-36]
gi|83955356|ref|ZP_00964011.1| hypothetical protein NAS141_16939 [Sulfitobacter sp. NAS-14.1]
gi|83840349|gb|EAP79523.1| hypothetical protein NAS141_16939 [Sulfitobacter sp. NAS-14.1]
gi|83844641|gb|EAP82526.1| hypothetical protein EE36_11713 [Sulfitobacter sp. EE-36]
Length = 246
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ +A +F+ LSK++ +A K G DP+ N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDKLRAKVFSKLSKEITIAAKM-GEPDPDKNPRLRLAVKEAKGQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK V Y E+ + P G A +V AM+ R
Sbjct: 61 MPKDNIERAIKKA-VGGEGEDYEEIRYEGYGPN----------GVAVIVEAMTDNR 105
>gi|408791758|ref|ZP_11203368.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira meyeri
serovar Hardjo str. Went 5]
gi|408463168|gb|EKJ86893.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira meyeri
serovar Hardjo str. Went 5]
Length = 247
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW IR K A D ++ +FT ++K++ +A KEGGG D N RL + K ++
Sbjct: 2 SGHSKWATIRRKKGAIDAKRGAIFTRIAKEISVAAKEGGG-DQEGNPRLRLAVTKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK + G + CL +L G A +V ++ + R
Sbjct: 61 MPKDNIERAIKKG--TGGLEGMVYEECLY--------ECYALGGVAIMVDVLTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM 168
P I +LG L + ++R+
Sbjct: 111 PEIKSILTKLGGSLANAGAVSRL 133
>gi|383765166|ref|YP_005444147.1| hypothetical protein PSMK_00910 [Phycisphaera mikurensis NBRC
102666]
gi|381385434|dbj|BAM02250.1| hypothetical protein PSMK_00910 [Phycisphaera mikurensis NBRC
102666]
Length = 238
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D +++ +++ S+ + +A K GGG DP+ N L +D K ++
Sbjct: 2 AGHSKWANIKHRKARQDAKRSKIWSKCSRAIIVAAKHGGG-DPDQNLTLRYAVDEAKAAN 60
Query: 88 MPMTTIENAIK 98
MP TI AI+
Sbjct: 61 MPKDTIAKAIE 71
>gi|343519164|ref|ZP_08756149.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
pittmaniae HK 85]
gi|343392930|gb|EGV05490.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
pittmaniae HK 85]
Length = 246
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVGSNPRLRAAVDKALSSN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|220935405|ref|YP_002514304.1| hypothetical protein Tgr7_2237 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254801696|sp|B8GUJ7.1|Y2237_THISH RecName: Full=Probable transcriptional regulatory protein
Tgr7_2237
gi|219996715|gb|ACL73317.1| conserved hypothetical protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 249
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L K++ +A + GG+D N+N RL +D ++
Sbjct: 2 AGHSKWANIQHRKNAQDAKRGKLFTKLIKEITVAARM-GGSDLNSNPRLRLAVDKALDAN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTKDTVERAIK 71
>gi|158335009|ref|YP_001516181.1| hypothetical protein AM1_1847 [Acaryochloris marina MBIC11017]
gi|189039042|sp|B0CDE2.1|Y1847_ACAM1 RecName: Full=Probable transcriptional regulatory protein AM1_1847
gi|158305250|gb|ABW26867.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 253
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +K +F LS+ + +A + G DPN N++L S ID K +
Sbjct: 2 AGHSKWANIKRQKARVDAKKGKVFARLSRAIIVAARH-GSADPNGNFQLRSAIDKAKAAG 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
+P I+ AI + G L+ W+ + G A L+ AM+ R +
Sbjct: 61 IPNENIDRAIAKGS------GQLDAEGDQWEEIRY--EGYGIGGVALLIEAMTDNRNRTA 112
Query: 148 ANF 150
A+
Sbjct: 113 ADL 115
>gi|429212453|ref|ZP_19203618.1| Transcriptional regulatory protein PmpR [Pseudomonas sp. M1]
gi|428156935|gb|EKX03483.1| Transcriptional regulatory protein PmpR [Pseudomonas sp. M1]
Length = 248
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L ++L +A K+GGG +P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKRGKIFTKLIRELTVAAKQGGG-NPADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ AI + EL+ + P+ G A +V AM+ R
Sbjct: 61 MTRDTIDRAIARGAGSNDADNMEELTYEGYAPS----------GVAIIVEAMTDNR 106
>gi|419801161|ref|ZP_14326398.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
parainfluenzae HK262]
gi|419845461|ref|ZP_14368731.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
parainfluenzae HK2019]
gi|385193892|gb|EIF41238.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
parainfluenzae HK262]
gi|386415574|gb|EIJ30100.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
parainfluenzae HK2019]
Length = 246
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSSN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETRIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|269838390|ref|YP_003320618.1| hypothetical protein Sthe_2376 [Sphaerobacter thermophilus DSM
20745]
gi|269787653|gb|ACZ39796.1| protein of unknown function DUF28 [Sphaerobacter thermophilus DSM
20745]
Length = 248
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ KAA D +K F+ +++++ +AV+E GG +P+ N RL ++ K+
Sbjct: 2 AGHSKWAQIKRQKAAADFKKGATFSKIAREIHVAVRE-GGPNPDANLRLRMALERAKREG 60
Query: 88 MPMTTIENAIKSCN 101
MP TIE AI +
Sbjct: 61 MPNDTIERAIAKAS 74
>gi|403416166|emb|CCM02866.1| predicted protein [Fibroporia radiculosa]
Length = 270
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
+ ++GH+KW I+ K A D K L++ +K + LAV+ GG DP N LA+ I K
Sbjct: 20 ISHSGHNKWSKIKERKGANDLRKGVLYSKANKDILLAVRTGGSVDPEQNATLAAVIKKVK 79
Query: 85 KSSMPMTTIENAIK 98
+P IENA+K
Sbjct: 80 SQGVPKDNIENALK 93
>gi|253997453|ref|YP_003049517.1| hypothetical protein Mmol_2088 [Methylotenera mobilis JLW8]
gi|253984132|gb|ACT48990.1| protein of unknown function DUF28 [Methylotenera mobilis JLW8]
Length = 241
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT + K++ ++ + GGG DPN N RL + + K+ +
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKIFTKIIKEITVSARLGGG-DPNMNPRLRAAVALAKEEN 60
Query: 88 MPMTTIENAIK 98
MP I AIK
Sbjct: 61 MPSDNITRAIK 71
>gi|386714943|ref|YP_006181266.1| hypothetical protein HBHAL_3647 [Halobacillus halophilus DSM 2266]
gi|384074499|emb|CCG45992.1| UPF0082 family protein [Halobacillus halophilus DSM 2266]
Length = 250
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K A+D ++ LF L++++ +A ++GGG DP N L +D K ++
Sbjct: 2 AGHSKWSNIKRRKGAQDAKRGKLFMKLAREIFMAARQGGG-DPEMNPNLRLAVDKAKSNN 60
Query: 88 MPMTTIENAIKSC 100
MP I+ AIK
Sbjct: 61 MPNENIDRAIKKA 73
>gi|322420880|ref|YP_004200103.1| hypothetical protein GM18_3392 [Geobacter sp. M18]
gi|320127267|gb|ADW14827.1| protein of unknown function DUF28 [Geobacter sp. M18]
Length = 247
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ +FT L K++ +A K GGG D + N RL + ID K +
Sbjct: 2 SGHNKWSTIKHKKGAADAKRGKVFTKLIKEITVAAKLGGG-DADGNPRLRTAIDKAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP +E AIK Y E + + P G+A LV M+ R
Sbjct: 61 MPKDNVERAIKKGVGGLEGVNYEETTYEGYGPG----------GTAVLVEVMTDNR 106
>gi|71909676|ref|YP_287263.1| hypothetical protein Daro_4067 [Dechloromonas aromatica RCB]
gi|119391993|sp|Q478D8.1|Y4067_DECAR RecName: Full=Probable transcriptional regulatory protein Daro_4067
gi|71849297|gb|AAZ48793.1| Protein of unknown function DUF28 [Dechloromonas aromatica RCB]
Length = 241
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ F+ ++K++ +A K GGG D N N RL +D K +
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGAAFSKIAKEITVASKMGGG-DINFNPRLRVAVDKAKGVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP I+ AIK Y+E+
Sbjct: 61 MPKDKIDTAIKKGTGELEGVEYIEI 85
>gi|57234746|ref|YP_181188.1| hypothetical protein DET0444 [Dehalococcoides ethenogenes 195]
gi|119392003|sp|Q3Z9B1.1|Y444_DEHE1 RecName: Full=Probable transcriptional regulatory protein DET0444
gi|57225194|gb|AAW40251.1| conserved hypothetical protein TIGR01033 [Dehalococcoides
ethenogenes 195]
Length = 251
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT LS+++ A K+GG + P N RL I K +
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKLSREIIFAAKQGGPS-PEGNARLRLAIQKAKDNR 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK + +E+ + P G A LV+ MS R
Sbjct: 61 MPSDNIERAIKKGSGELEGATVIEIILEGYGPG----------GVAVLVNGMSDNR 106
>gi|254516711|ref|ZP_05128770.1| conserved hypothetical protein TIGR01033 [gamma proteobacterium
NOR5-3]
gi|219675134|gb|EED31501.1| conserved hypothetical protein TIGR01033 [gamma proteobacterium
NOR5-3]
Length = 248
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L +A K+GG P N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKMFTKLIRELVVAAKQGGPL-PEDNPRLRAAVDKALGSN 60
Query: 88 MPMTTIENAI 97
M TI+ AI
Sbjct: 61 MTRDTIDRAI 70
>gi|339502710|ref|YP_004690130.1| hypothetical protein RLO149_c011630 [Roseobacter litoralis Och 149]
gi|338756703|gb|AEI93167.1| hypothetical protein DUF28 [Roseobacter litoralis Och 149]
Length = 246
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +A LF+ LSK++ +A K G DP N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDAVRAKLFSKLSKEITVAAK-MGDPDPEKNPRLRLAVKEAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP I+ AIK V + Y E+ + P G A +V M+ R
Sbjct: 61 MPKDNIDRAIKKSQVGDGDE-YEEIRYEGYGPN----------GVAVIVETMTDNR 105
>gi|258405868|ref|YP_003198610.1| hypothetical protein Dret_1748 [Desulfohalobium retbaense DSM
5692]
gi|257798095|gb|ACV69032.1| protein of unknown function DUF28 [Desulfohalobium retbaense DSM
5692]
Length = 249
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K A+D ++ +FT ++K++ LA K GGG D + N RL + ++ K +
Sbjct: 2 AGHSKWANIKRRKGAQDAKRGKIFTRVTKEIMLAAKLGGG-DLDGNSRLRAAVESAKSVN 60
Query: 88 MPMTTIENAIK 98
+P IE AIK
Sbjct: 61 LPKDKIETAIK 71
>gi|406904640|gb|EKD46351.1| hypothetical protein ACD_68C00019G0001 [uncultured bacterium]
Length = 243
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KA DQ++A +FT + + LA KE GG+D TN++L ID + +
Sbjct: 2 SGHSKWSTIKRQKAVTDQKRAQVFTKFAAAISLAAKE-GGSDLETNFKLRLAIDRARAMN 60
Query: 88 MPMTTIENAIKSCNVP 103
MP I AI+ P
Sbjct: 61 MPHDNITRAIERATKP 76
>gi|359459336|ref|ZP_09247899.1| hypothetical protein ACCM5_11449 [Acaryochloris sp. CCMEE 5410]
Length = 253
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +K +F LS+ + +A + G DPN N++L S ID K +
Sbjct: 2 AGHSKWANIKRQKARVDAKKGKVFARLSRAIIVAARH-GSADPNGNFQLRSAIDKAKAAG 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
+P I+ AI + G L+ W+ + G A L+ AM+ R +
Sbjct: 61 IPNENIDRAIAKGS------GQLDAEGDQWEEIRY--EGYGIGGVALLIEAMTDNRNRTA 112
Query: 148 ANF 150
A+
Sbjct: 113 ADL 115
>gi|407715729|ref|YP_006837009.1| hypothetical protein Q91_0466 [Cycloclasticus sp. P1]
gi|407256065|gb|AFT66506.1| hypothetical protein Q91_0466 [Cycloclasticus sp. P1]
Length = 248
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIR K A+D ++ LFT L +++ +A K G DP+ N RL + +D ++
Sbjct: 2 AGHSKWANIRFRKGAQDAKRGKLFTKLIREITVATK-AAGPDPDNNPRLRAAVDKGLSNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRV 142
M TIE AIK + + + E+ + P IA +V CL +R
Sbjct: 61 MKRDTIETAIKKGSGTTDSENFDEIRYEGYGPA-GIAIIVD-----CLTDNKNRT 109
>gi|347531849|ref|YP_004838612.1| hypothetical protein RHOM_07835 [Roseburia hominis A2-183]
gi|345501997|gb|AEN96680.1| hypothetical protein RHOM_07835 [Roseburia hominis A2-183]
Length = 242
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N++LA I + ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTIIGREIAVAVKE-GGPDPANNFKLAQVIAKARSNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK N Y + + P+ G+A +V ++ + +
Sbjct: 61 MPNDTIERGIKKAAGDGNSVNYEFCTYEGYGPS----------GTAIIVKCLTDNKNRTA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|406994633|gb|EKE13603.1| hypothetical protein ACD_12C00893G0007 [uncultured bacterium]
Length = 237
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGG-TDPNTNYRLASTIDYCKKS 86
+GHSKW NI+ K D+ KA++F +S + +AV EGGG +P+ N +L ID K S
Sbjct: 2 SGHSKWANIKRKKGVNDKIKASVFAKMSHLITIAVLEGGGIVEPDNNVKLRLAIDKAKSS 61
Query: 87 SMPMTTIENAIKSCNVPENI 106
+MP I+ AI+ P+ +
Sbjct: 62 NMPKENIKRAIEKGFGPDRL 81
>gi|420157930|ref|ZP_14664754.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium sp.
MSTE9]
gi|394755277|gb|EJF38524.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium sp.
MSTE9]
Length = 246
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K D KA +FT + ++L +AVKEGGG DP +N +L I K ++
Sbjct: 2 SGHSKWSTIKRKKEKIDGAKAKIFTKIGRELAVAVKEGGGPDPRSNSKLKDCIAKAKAAN 61
Query: 88 MPMTTIENAIK 98
+P IE IK
Sbjct: 62 VPNDNIERIIK 72
>gi|331663361|ref|ZP_08364271.1| protein YebC, partial [Escherichia coli TA143]
gi|331059160|gb|EGI31137.1| protein YebC [Escherichia coli TA143]
Length = 75
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + ID ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|296331673|ref|ZP_06874142.1| hypothetical protein BSU6633_11223 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675368|ref|YP_003867040.1| hypothetical protein BSUW23_13470 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151268|gb|EFG92148.1| hypothetical protein BSU6633_11223 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413612|gb|ADM38731.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 240
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++ +F L+K++ +A KEGG DP N L I+ K ++
Sbjct: 2 AGHSKWKNIQKRKNAQDAKRGKIFMKLAKEIYVAAKEGGA-DPEANSALRLVIEKAKGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP I+ AIK + Y E++ + P+ IA +V
Sbjct: 61 MPNENIDRAIKKAAGSLDGSSYEEITYEGYGPS-GIAVMVE 100
>gi|335041526|ref|ZP_08534553.1| hypothetical protein MAMP_00031 [Methylophaga aminisulfidivorans
MP]
gi|333788140|gb|EGL54022.1| hypothetical protein MAMP_00031 [Methylophaga aminisulfidivorans
MP]
Length = 249
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ +A K GG+DP +N RL + ID ++
Sbjct: 2 AGHSKWANIQHRKGAQDAKRGKLFTKLIREITVAAKM-GGSDPASNPRLRAAIDKALGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M IE A K Y E+ + P G+A +V M+ R
Sbjct: 61 MTKDVIERATKRGAGELEGVNYEEIRYEGYGPN----------GTAIMVDCMTDNR 106
>gi|294669541|ref|ZP_06734608.1| hypothetical protein NEIELOOT_01440 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308454|gb|EFE49697.1| hypothetical protein NEIELOOT_01440 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 241
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D ++ +FT L K++ +A + GGG DP N RL +D S+
Sbjct: 2 AGHSKWANIQHKKARADAQRGKIFTRLIKEITVAARLGGG-DPGANPRLRLAMDKAAASN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|431753369|ref|ZP_19542043.1| hypothetical protein OKI_05285 [Enterococcus faecium E2620]
gi|430612276|gb|ELB49327.1| hypothetical protein OKI_05285 [Enterococcus faecium E2620]
Length = 240
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-AGGPDPSMNPTLRLVVDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP +E AIK + Y E++ + P +G LV A++ R +
Sbjct: 61 MPNDNVERAIKKATSAVDETNYDEITYEGYGP----------DGVGILVHALTDNRNRTA 110
Query: 148 AN 149
N
Sbjct: 111 TN 112
>gi|406913038|gb|EKD52525.1| protein of unknown function DUF28 [uncultured bacterium]
Length = 249
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++A +F + K++ +A + GGG DPN N RL I+ K S
Sbjct: 2 SGHSKWSTIKHKKGAADAKRAQIFGKIIKEVTVASRLGGG-DPNANPRLRLAIEKAKAQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELS 113
+P IE AIK Y E+S
Sbjct: 61 LPKDNIERAIKKGTGELEGESYEEIS 86
>gi|169334008|ref|ZP_02861201.1| hypothetical protein ANASTE_00400 [Anaerofustis stercorihominis
DSM 17244]
gi|169258725|gb|EDS72691.1| DNA-binding regulatory protein, YebC/PmpR family [Anaerofustis
stercorihominis DSM 17244]
Length = 256
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H KA D +K ++T ++K + +A +E GG DP+ N +L I K ++
Sbjct: 11 SGHSKWSTIKHKKAKTDAQKGKIYTKMAKLIAVAARE-GGADPDLNAKLKDAIAKAKSNN 69
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 70 MPNDNIERAIK 80
>gi|332298168|ref|YP_004440090.1| hypothetical protein Trebr_1536 [Treponema brennaborense DSM
12168]
gi|332181271|gb|AEE16959.1| UPF0082 protein yeeN [Treponema brennaborense DSM 12168]
Length = 246
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT K++ +A + GGG DP +N RL + + + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKFIKEISIAARMGGG-DPGSNPRLRTAMLKARAAN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|88705603|ref|ZP_01103313.1| protein containing DUF28 [Congregibacter litoralis KT71]
gi|88700116|gb|EAQ97225.1| protein containing DUF28 [Congregibacter litoralis KT71]
Length = 248
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L +A K+GG P N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKMFTKLIRELVVAAKQGGPL-PEDNPRLRAAVDKALGSN 60
Query: 88 MPMTTIENAI 97
M TI+ AI
Sbjct: 61 MTRDTIDRAI 70
>gi|407473505|ref|YP_006787905.1| YebC/PmpR family DNA-binding regulatory protein [Clostridium
acidurici 9a]
gi|407050013|gb|AFS78058.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium
acidurici 9a]
Length = 247
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI++ K D ++ +FT L + + +A +E GG DP N L S I+ K +
Sbjct: 2 AGHSKWNNIKNKKGKMDAQRGKMFTKLGRYITVAARE-GGDDPEYNAALKSAIEKAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRV 142
MP IE AIK Y E++ + P+ +A V CL +R
Sbjct: 61 MPNDNIERAIKKGTGDLEGANYEEITYEGYGPS-GVAVFVD-----CLTDNRNRT 109
>gi|406984952|gb|EKE05859.1| hypothetical protein ACD_19C00176G0081 [uncultured bacterium]
Length = 236
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHS + I+ K KD K +F LSK + +A+K GGG PN N++L ID K+ +
Sbjct: 2 SGHSHFATIKRQKGLKDAAKGNVFGKLSKNISIAIKSGGGVSPNMNFKLRIAIDKAKEFN 61
Query: 88 MPMTTIENAIKSCNVP-ENI 106
MP I+ +KS ENI
Sbjct: 62 MPKDNIDRILKSAESKMENI 81
>gi|420100047|ref|ZP_14611244.1| hypothetical protein ECO9455_10129, partial [Escherichia coli
O111:H11 str. CVM9455]
gi|394421923|gb|EJE95349.1| hypothetical protein ECO9455_10129, partial [Escherichia coli
O111:H11 str. CVM9455]
Length = 293
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + ID ++
Sbjct: 49 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAIDKALSNN 107
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 108 MTRDTLNRAI 117
>gi|325579046|ref|ZP_08149002.1| YebC like protein [Haemophilus parainfluenzae ATCC 33392]
gi|345429664|ref|YP_004822782.1| hypothetical protein PARA_10870 [Haemophilus parainfluenzae T3T1]
gi|301155725|emb|CBW15193.1| conserved protein [Haemophilus parainfluenzae T3T1]
gi|325159281|gb|EGC71415.1| YebC like protein [Haemophilus parainfluenzae ATCC 33392]
Length = 246
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVGANPRLRAAVDKALSSN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|94264072|ref|ZP_01287871.1| Protein of unknown function DUF28 [delta proteobacterium MLMS-1]
gi|93455488|gb|EAT05678.1| Protein of unknown function DUF28 [delta proteobacterium MLMS-1]
Length = 249
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K A D ++ +F+ L+K++ +A + GGG D N RL S + K +
Sbjct: 2 AGHSKWANIKRRKGAVDAKRGKIFSRLNKEIMVAARLGGG-DSTGNPRLRSALAAAKAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
MP +E AIK Y E++ + P G A LV AM+ RVR
Sbjct: 61 MPKENVERAIKKGTGELEGAAYEEITYEGYGPG----------GVAVLVEAMTDNRVR 108
>gi|345876117|ref|ZP_08827894.1| hypothetical protein l11_19820 [Neisseria weaveri LMG 5135]
gi|417956833|ref|ZP_12599772.1| hypothetical protein l13_01780 [Neisseria weaveri ATCC 51223]
gi|343967338|gb|EGV35585.1| hypothetical protein l11_19820 [Neisseria weaveri LMG 5135]
gi|343969962|gb|EGV38164.1| hypothetical protein l13_01780 [Neisseria weaveri ATCC 51223]
Length = 242
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NIRH K +D ++ +FT L K++ +A K GGG DP +N RL +D ++
Sbjct: 2 AGHSKWANIRHKKERQDAKRGKIFTRLIKEITVAAKMGGG-DPASNPRLRLAMDKAFDNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP I+ AI Y+EL
Sbjct: 61 MPKDNIQRAIDKGTGNLEGVEYIEL 85
>gi|297521467|ref|ZP_06939853.1| hypothetical protein EcolOP_27764 [Escherichia coli OP50]
Length = 98
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + ID ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|193215491|ref|YP_001996690.1| hypothetical protein Ctha_1786 [Chloroherpeton thalassium ATCC
35110]
gi|226695964|sp|B3QTP5.1|Y1786_CHLT3 RecName: Full=Probable transcriptional regulatory protein Ctha_1786
gi|193088968|gb|ACF14243.1| protein of unknown function DUF28 [Chloroherpeton thalassium ATCC
35110]
Length = 250
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KAA DQ++ LFT L K++ ++ + GGG DP+ N RL I+ + +S
Sbjct: 2 SGHSKWATIKRKKAATDQKRGKLFTKLVKEITISARMGGG-DPDGNPRLRLAIENARANS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ A++ + Y E+S + P
Sbjct: 61 MPAENIKRAVQRGTGEIDGANYEEISYEGYGP 92
>gi|82523874|emb|CAI78822.1| hypothetical protein [uncultured candidate division WS3
bacterium]
Length = 201
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K D + +FT L ++L +A + GGG DP +N RL + I K S+
Sbjct: 2 SGHSKWATIKRKKEKVDAARGRVFTKLIRELTVAARSGGG-DPVSNIRLRTAIQAAKDSN 60
Query: 88 MPMTTIENAIK 98
MP + IE AIK
Sbjct: 61 MPQSNIEKAIK 71
>gi|165976578|ref|YP_001652171.1| hypothetical protein APJL_1171 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307246066|ref|ZP_07528148.1| hypothetical protein appser1_12690 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255048|ref|ZP_07536866.1| hypothetical protein appser9_12820 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259484|ref|ZP_07541209.1| hypothetical protein appser11_12810 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|226696252|sp|B0BQ92.1|Y1171_ACTPJ RecName: Full=Probable transcriptional regulatory protein APJL_1171
gi|165876679|gb|ABY69727.1| hypothetical protein APJL_1171 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306853001|gb|EFM85224.1| hypothetical protein appser1_12690 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861921|gb|EFM93897.1| hypothetical protein appser9_12820 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866420|gb|EFM98283.1| hypothetical protein appser11_12810 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 246
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL S +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRSAVDKALSNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|124008996|ref|ZP_01693681.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123985422|gb|EAY25330.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 248
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT L K++ +A K G DP TN RL I K +
Sbjct: 2 AGHSKWANIKHRKGAQDAKRGKIFTKLIKEITVAAK-IGSPDPETNPRLRLAIQNAKGVN 60
Query: 88 MPMTTIENAIKSC 100
MP IE AIK
Sbjct: 61 MPKDNIERAIKKA 73
>gi|182413289|ref|YP_001818355.1| hypothetical protein Oter_1471 [Opitutus terrae PB90-1]
gi|226734183|sp|B1ZSR1.1|Y1471_OPITP RecName: Full=Probable transcriptional regulatory protein
Oter_1471
gi|177840503|gb|ACB74755.1| protein of unknown function DUF28 [Opitutus terrae PB90-1]
Length = 248
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++ +KA D K +F+ LS+ + LA K GGG DPN N RL + + + ++
Sbjct: 2 AGHNKWSKVKRLKAVTDARKGKVFSRLSRDITLAAKAGGG-DPNGNARLRTLLLKARDAN 60
Query: 88 MPMTTIENAIK 98
MP ++ A+K
Sbjct: 61 MPADNVDRAVK 71
>gi|32033872|ref|ZP_00134143.1| COG0217: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208621|ref|YP_001053846.1| hypothetical protein APL_1151 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|190150479|ref|YP_001969004.1| hypothetical protein APP7_1210 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303250099|ref|ZP_07336301.1| hypothetical protein APP6_1511 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303253273|ref|ZP_07339422.1| hypothetical protein APP2_0580 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248174|ref|ZP_07530202.1| hypothetical protein appser2_11550 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307250407|ref|ZP_07532354.1| hypothetical protein appser4_11880 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252789|ref|ZP_07534680.1| hypothetical protein appser6_13030 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307257205|ref|ZP_07538977.1| hypothetical protein appser10_12050 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307261633|ref|ZP_07543301.1| hypothetical protein appser12_11940 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307263823|ref|ZP_07545428.1| hypothetical protein appser13_12330 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|166228895|sp|A3N1F5.1|Y1151_ACTP2 RecName: Full=Probable transcriptional regulatory protein APL_1151
gi|226696275|sp|B3GY39.1|Y1210_ACTP7 RecName: Full=Probable transcriptional regulatory protein APP7_1210
gi|126097413|gb|ABN74241.1| hypothetical protein APL_1151 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915610|gb|ACE61862.1| hypothetical protein APP7_1210 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302647955|gb|EFL78162.1| hypothetical protein APP2_0580 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302651162|gb|EFL81316.1| hypothetical protein APP6_1511 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306855351|gb|EFM87526.1| hypothetical protein appser2_11550 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306857536|gb|EFM89645.1| hypothetical protein appser4_11880 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859821|gb|EFM91843.1| hypothetical protein appser6_13030 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306864367|gb|EFM96278.1| hypothetical protein appser10_12050 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306868756|gb|EFN00565.1| hypothetical protein appser12_11940 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306870812|gb|EFN02551.1| hypothetical protein appser13_12330 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 246
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL S +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRSAVDKALSNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|419718294|ref|ZP_14245618.1| DNA-binding regulatory protein, YebC/PmpR family
[Lachnoanaerobaculum saburreum F0468]
gi|383305510|gb|EIC96871.1| DNA-binding regulatory protein, YebC/PmpR family
[Lachnoanaerobaculum saburreum F0468]
Length = 242
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DPN N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGPDPNNNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
+P TIE IK S N +N Y GY
Sbjct: 61 VPNDTIERGIKKAAGDINSVNYEQNTYEGY 90
>gi|317124985|ref|YP_004099097.1| hypothetical protein Intca_1858 [Intrasporangium calvum DSM
43043]
gi|315589073|gb|ADU48370.1| protein of unknown function DUF28 [Intrasporangium calvum DSM
43043]
Length = 256
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAAKD ++ LF L K +++A ++GGG DP N L I KK+S
Sbjct: 2 SGHSKWATTKHQKAAKDAKRGKLFAKLIKNIEVAARQGGG-DPAGNPTLYDAIQKAKKTS 60
Query: 88 MPMTTIENAIK 98
+P I+ A+K
Sbjct: 61 VPNDNIDRALK 71
>gi|386388773|ref|ZP_10073626.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
paraphrohaemolyticus HK411]
gi|385697287|gb|EIG27722.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
paraphrohaemolyticus HK411]
Length = 246
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL S +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRSAVDKALSNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|350553201|ref|ZP_08922384.1| UPF0082 protein yeeN [Thiorhodospira sibirica ATCC 700588]
gi|349791537|gb|EGZ45418.1| UPF0082 protein yeeN [Thiorhodospira sibirica ATCC 700588]
Length = 245
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L K++ +A + GG+D N N RL +D ++
Sbjct: 2 AGHSKWANIQHRKNAQDAKRGKLFTKLIKEITVAARM-GGSDINANPRLRQAVDKALDAN 60
Query: 88 MPMTTIENAIK 98
M TIE A K
Sbjct: 61 MTKDTIERATK 71
>gi|255262233|ref|ZP_05341575.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255104568|gb|EET47242.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 246
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ ++ LF+ L+K++ +A K G DP+ N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDKLRSKLFSKLAKEITVAAKM-GDPDPDNNPRLRMAVKEAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
+P I+ AIK E Y E+ + P+ G A +V AM+ R
Sbjct: 61 VPKDVIDRAIKKSQAGEG-DNYDEIRYEGYGPS----------GVAVIVEAMTDNR 105
>gi|387774113|ref|ZP_10129387.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
parahaemolyticus HK385]
gi|386902663|gb|EIJ67498.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
parahaemolyticus HK385]
Length = 246
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL S +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRSAVDKALSNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|407691786|ref|YP_006816575.1| hypothetical protein ASU2_00970 [Actinobacillus suis H91-0380]
gi|407387843|gb|AFU18336.1| hypothetical protein ASU2_00970 [Actinobacillus suis H91-0380]
Length = 246
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL S +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVSANPRLRSAVDKALSNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|260912900|ref|ZP_05919385.1| YebC like protein [Pasteurella dagmatis ATCC 43325]
gi|260632890|gb|EEX51056.1| YebC like protein [Pasteurella dagmatis ATCC 43325]
Length = 246
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D S+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVSANPRLRAAVDKALSSN 60
Query: 88 MPMTTIENAIK 98
M TI AI
Sbjct: 61 MTRDTINRAID 71
>gi|322515239|ref|ZP_08068237.1| YebC like protein [Actinobacillus ureae ATCC 25976]
gi|322118744|gb|EFX90950.1| YebC like protein [Actinobacillus ureae ATCC 25976]
Length = 246
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL S +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVSANPRLRSAVDKALSNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|315651757|ref|ZP_07904762.1| glucose-1-phosphate adenylyltransferase [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315486012|gb|EFU76389.1| glucose-1-phosphate adenylyltransferase [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 253
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DPN N +L I K ++
Sbjct: 13 SGHSKFANIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGPDPNNNSKLRDVIAKAKANN 71
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
+P TIE IK S N +N Y GY
Sbjct: 72 VPNDTIERGIKKAAGDINSVNYEQNTYEGY 101
>gi|456062822|ref|YP_007501792.1| hypothetical protein D521_0488 [beta proteobacterium CB]
gi|455440119|gb|AGG33057.1| hypothetical protein D521_0488 [beta proteobacterium CB]
Length = 239
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T L K++ +A K GGG D TN RL ID K ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGKIWTKLIKEITVAAKLGGG-DIATNPRLRLAIDKAKDAN 60
Query: 88 MPMTTIENAIK 98
MP ++ AI+
Sbjct: 61 MPNDNVQRAIQ 71
>gi|336114519|ref|YP_004569286.1| hypothetical protein BCO26_1841 [Bacillus coagulans 2-6]
gi|335367949|gb|AEH53900.1| protein of unknown function DUF28 [Bacillus coagulans 2-6]
Length = 240
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW+NI+ K A+D ++ +F L+K++ +A K G DP N L I+ K ++
Sbjct: 2 SGHSKWKNIQGRKNAQDAKRGKIFQKLAKEIYVAAK--NGPDPEANSSLRLVIEKAKAAN 59
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRF 144
MP I+ AI+ N +N Y E++ + P + +L + ++ RV F
Sbjct: 60 MPNDNIKRAIEKANGSQNAEHYEEITYEGYGPGGVAVMVTALTDNKNRTASNVRVAF 116
>gi|225027968|ref|ZP_03717160.1| hypothetical protein EUBHAL_02228 [Eubacterium hallii DSM 3353]
gi|224954682|gb|EEG35891.1| DNA-binding regulatory protein, YebC/PmpR family [Eubacterium
hallii DSM 3353]
Length = 244
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGPDPANNSKLRDVIAKAKSNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP TIE IK N Y++ + + P
Sbjct: 61 MPNDTIERGIKKAAGDANSVNYVQNTYEGYGP 92
>gi|452851617|ref|YP_007493301.1| conserved protein of unknown function [Desulfovibrio piezophilus]
gi|451895271|emb|CCH48150.1| conserved protein of unknown function [Desulfovibrio piezophilus]
Length = 247
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +KA FT +K + LA K GGG P N L I K +
Sbjct: 2 AGHSKWANIQHRKGRQDAKKAKFFTKAAKDIILAAKAGGGN-PEDNSGLRLAIQKAKAVN 60
Query: 88 MPMTTIENAIK 98
+P I+NAIK
Sbjct: 61 LPKDKIDNAIK 71
>gi|340357232|ref|ZP_08679854.1| glucose-1-phosphate adenylyltransferase [Sporosarcina newyorkensis
2681]
gi|339617999|gb|EGQ22602.1| glucose-1-phosphate adenylyltransferase [Sporosarcina newyorkensis
2681]
Length = 240
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI++ K A+D ++ +F +S+++ +A K GG DP+TN L ID K ++
Sbjct: 2 AGHSKWKNIQNRKGAQDAKRGKIFQKMSREIYVAAK-SGGDDPDTNPALRLAIDKSKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS------R 141
+P I+ AI Y E+ + P +A LV CL + R
Sbjct: 61 VPNDVIQRAIDKATGAGADENYEEVIYEGYGPG-GVAVLVY-----CLTENRNRTGPNIR 114
Query: 142 VRF---------PPSANFISNRLG-LFLECSEPITRMKQASVLLA-TALAHNVFPVPGG 189
V F S N++ R G LF+E + I + A +LLA A A ++ G
Sbjct: 115 VAFNKNGGSLGESGSVNYLFERKGRLFIERTAEID--EDAIMLLALEAGAEDILSTEDG 171
>gi|302879791|ref|YP_003848355.1| hypothetical protein Galf_2594 [Gallionella capsiferriformans ES-2]
gi|302582580|gb|ADL56591.1| protein of unknown function DUF28 [Gallionella capsiferriformans
ES-2]
Length = 241
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ +A + GG+DP N RL +D ++
Sbjct: 2 AGHSKWANIQHRKGKQDAKRGKIFTRLIKEITVAARM-GGSDPTGNPRLRLAMDKAYANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP +E AIK + Y+E+ + + G+A +V M+ +
Sbjct: 61 MPKDNVERAIKRGSGELEGVQYMEIRYEGY----------GINGAAVMVDCMTDNKMRAV 110
Query: 148 AN 149
A+
Sbjct: 111 AD 112
>gi|313884405|ref|ZP_07818166.1| DNA-binding regulatory protein, YebC/PmpR family [Eremococcus
coleocola ACS-139-V-Col8]
gi|312620189|gb|EFR31617.1| DNA-binding regulatory protein, YebC/PmpR family [Eremococcus
coleocola ACS-139-V-Col8]
Length = 244
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 24 LVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYC 83
+ + +GH+KW I++ K A+D K +F LSK++ +A K GGG DP+ N L +D
Sbjct: 1 MKKMSGHNKWSKIKNKKGAEDARKGAVFGKLSKEIFMAAKNGGG-DPSMNSTLRMVLDKA 59
Query: 84 KKSSMPMTTIENAIKSCNVPENIYGYLELS 113
K +MP I AIK ++ Y E++
Sbjct: 60 KAENMPKDNITRAIKKATDAGDMTNYDEIT 89
>gi|363542807|ref|ZP_09312390.1| hypothetical protein MoviS_02029 [Mycoplasma ovipneumoniae SC01]
Length = 242
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D KA +F SK++ ++V + GG DPN+N L I + S
Sbjct: 2 AGHSKWANIKHRKGAQDALKAKIFNKFSKEIMVSVAK-GGPDPNSNPALRLIISKARAKS 60
Query: 88 MPMTTIENAI 97
MP IE AI
Sbjct: 61 MPKANIEKAI 70
>gi|170769424|ref|ZP_02903877.1| conserved hypothetical protein [Escherichia albertii TW07627]
gi|170121748|gb|EDS90679.1| conserved hypothetical protein [Escherichia albertii TW07627]
Length = 246
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + ID ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|225848858|ref|YP_002729022.1| hypothetical protein SULAZ_1049 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644599|gb|ACN99649.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 251
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI++ KA D + +FT + K++ +A + GGG DP N RL I+ K+ +
Sbjct: 2 AGHSKWHNIKNKKAKMDAIRGKIFTKVIKEITVAARLGGG-DPEANPRLRMAIEKAKEVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK Y E+ + P EG A +V A + R +
Sbjct: 61 MPSENIERAIKRGTGELEGVNYEEVRYEGYGP----------EGVAIIVEATTDNRNRTT 110
Query: 148 A 148
A
Sbjct: 111 A 111
>gi|45201043|ref|NP_986613.1| AGL053Cp [Ashbya gossypii ATCC 10895]
gi|44985826|gb|AAS54437.1| AGL053Cp [Ashbya gossypii ATCC 10895]
gi|374109864|gb|AEY98769.1| FAGL053Cp [Ashbya gossypii FDAG1]
Length = 281
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H KA D E+ LFT ++ ++ +AVK+GG DP N RLA+ I+ K++
Sbjct: 27 SGHNKWSTIKHDKAKNDAERNRLFTRMANQISVAVKQGGSADPTLNLRLAAAIEAASKAN 86
Query: 88 MPMTTIENAIK 98
+ IENAI+
Sbjct: 87 VTKKVIENAIR 97
>gi|359300466|ref|ZP_09186305.1| hypothetical protein Haemo_09959 [Haemophilus [parainfluenzae] CCUG
13788]
gi|402305199|ref|ZP_10824258.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
sputorum HK 2154]
gi|400376312|gb|EJP29199.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
sputorum HK 2154]
Length = 246
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL S +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVASNPRLRSAVDKALSNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|415768181|ref|ZP_11483520.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|348658135|gb|EGY75711.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
D17P-2]
Length = 246
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D ++N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|331647461|ref|ZP_08348553.1| protein YebC [Escherichia coli M605]
gi|331043185|gb|EGI15323.1| protein YebC [Escherichia coli M605]
Length = 246
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + ID ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|15802277|ref|NP_288301.1| hypothetical protein Z2916 [Escherichia coli O157:H7 str. EDL933]
gi|15831828|ref|NP_310601.1| hypothetical protein ECs2574 [Escherichia coli O157:H7 str.
Sakai]
gi|26248130|ref|NP_754170.1| hypothetical protein c2278 [Escherichia coli CFT073]
gi|91211089|ref|YP_541075.1| hypothetical protein UTI89_C2068 [Escherichia coli UTI89]
gi|110641982|ref|YP_669712.1| hypothetical protein ECP_1808 [Escherichia coli 536]
gi|117624016|ref|YP_852929.1| hypothetical protein APECO1_914 [Escherichia coli APEC O1]
gi|157156937|ref|YP_001463167.1| hypothetical protein EcE24377A_2094 [Escherichia coli E24377A]
gi|157161333|ref|YP_001458651.1| hypothetical protein EcHS_A1957 [Escherichia coli HS]
gi|168747891|ref|ZP_02772913.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168757898|ref|ZP_02782905.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168762342|ref|ZP_02787349.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168770847|ref|ZP_02795854.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168776589|ref|ZP_02801596.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168783164|ref|ZP_02808171.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168789729|ref|ZP_02814736.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168801900|ref|ZP_02826907.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|170683235|ref|YP_001743380.1| hypothetical protein EcSMS35_1322 [Escherichia coli SMS-3-5]
gi|188492343|ref|ZP_02999613.1| conserved hypothetical protein TIGR01033 [Escherichia coli 53638]
gi|191172997|ref|ZP_03034531.1| conserved hypothetical protein [Escherichia coli F11]
gi|195940290|ref|ZP_03085672.1| hypothetical protein EscherichcoliO157_28499 [Escherichia coli
O157:H7 str. EC4024]
gi|208810508|ref|ZP_03252384.1| conserved hypothetical protein TIGR01033 [Escherichia coli
O157:H7 str. EC4206]
gi|208816910|ref|ZP_03258030.1| conserved hypothetical protein TIGR01033 [Escherichia coli
O157:H7 str. EC4045]
gi|208820490|ref|ZP_03260810.1| conserved hypothetical protein TIGR01033 [Escherichia coli
O157:H7 str. EC4042]
gi|209400343|ref|YP_002270947.1| hypothetical protein ECH74115_2600 [Escherichia coli O157:H7 str.
EC4115]
gi|215487077|ref|YP_002329508.1| hypothetical protein E2348C_1989 [Escherichia coli O127:H6 str.
E2348/69]
gi|217328746|ref|ZP_03444827.1| conserved hypothetical protein TIGR01033 [Escherichia coli
O157:H7 str. TW14588]
gi|218548575|ref|YP_002382366.1| hypothetical protein EFER_1208 [Escherichia fergusonii ATCC
35469]
gi|218554452|ref|YP_002387365.1| hypothetical protein ECIAI1_1951 [Escherichia coli IAI1]
gi|218558729|ref|YP_002391642.1| hypothetical protein ECS88_1922 [Escherichia coli S88]
gi|218689802|ref|YP_002398014.1| hypothetical protein ECED1_2069 [Escherichia coli ED1a]
gi|218695430|ref|YP_002403097.1| hypothetical protein EC55989_2043 [Escherichia coli 55989]
gi|218699564|ref|YP_002407193.1| hypothetical protein ECIAI39_1185 [Escherichia coli IAI39]
gi|218705365|ref|YP_002412884.1| hypothetical protein ECUMN_2162 [Escherichia coli UMN026]
gi|222156608|ref|YP_002556747.1| hypothetical protein LF82_2923 [Escherichia coli LF82]
gi|227885708|ref|ZP_04003513.1| conserved hypothetical protein [Escherichia coli 83972]
gi|237705818|ref|ZP_04536299.1| yebC [Escherichia sp. 3_2_53FAA]
gi|251785312|ref|YP_002999616.1| hypothetical protein B21_01823 [Escherichia coli BL21(DE3)]
gi|253773179|ref|YP_003036010.1| hypothetical protein ECBD_1774 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161924|ref|YP_003045032.1| hypothetical protein ECB_01835 [Escherichia coli B str. REL606]
gi|254288712|ref|YP_003054460.1| hypothetical protein ECD_01835 [Escherichia coli BL21(DE3)]
gi|254793488|ref|YP_003078325.1| hypothetical protein ECSP_2438 [Escherichia coli O157:H7 str.
TW14359]
gi|260855804|ref|YP_003229695.1| hypothetical protein ECO26_2716 [Escherichia coli O26:H11 str.
11368]
gi|260868399|ref|YP_003234801.1| hypothetical protein ECO111_2386 [Escherichia coli O111:H- str.
11128]
gi|261227635|ref|ZP_05941916.1| hypothetical protein EscherichiacoliO157_23996 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261258199|ref|ZP_05950732.1| hypothetical protein EscherichiacoliO157EcO_20602 [Escherichia
coli O157:H7 str. FRIK966]
gi|291283046|ref|YP_003499864.1| hypothetical protein G2583_2316 [Escherichia coli O55:H7 str.
CB9615]
gi|293405359|ref|ZP_06649351.1| UPF0082 protein yebC [Escherichia coli FVEC1412]
gi|293410176|ref|ZP_06653752.1| hypothetical protein ECEG_01132 [Escherichia coli B354]
gi|293415179|ref|ZP_06657822.1| hypothetical protein ECDG_01735 [Escherichia coli B185]
gi|298381001|ref|ZP_06990600.1| yebC protein [Escherichia coli FVEC1302]
gi|300824194|ref|ZP_07104312.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
119-7]
gi|300899114|ref|ZP_07117397.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
198-1]
gi|300924953|ref|ZP_07140880.1| hypothetical protein HMPREF9548_03065 [Escherichia coli MS 182-1]
gi|300928895|ref|ZP_07144400.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
187-1]
gi|300935839|ref|ZP_07150797.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
21-1]
gi|300982168|ref|ZP_07175903.1| hypothetical protein HMPREF9553_02062 [Escherichia coli MS 200-1]
gi|300994107|ref|ZP_07180690.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
45-1]
gi|301018300|ref|ZP_07182809.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
69-1]
gi|301050782|ref|ZP_07197639.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
185-1]
gi|301327653|ref|ZP_07220861.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
78-1]
gi|306814306|ref|ZP_07448472.1| hypothetical protein ECNC101_19736 [Escherichia coli NC101]
gi|307314224|ref|ZP_07593834.1| protein of unknown function DUF28 [Escherichia coli W]
gi|312967067|ref|ZP_07781285.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|331657913|ref|ZP_08358875.1| protein YebC [Escherichia coli TA206]
gi|331668559|ref|ZP_08369407.1| protein YebC [Escherichia coli TA271]
gi|331673394|ref|ZP_08374162.1| protein YebC [Escherichia coli TA280]
gi|331677745|ref|ZP_08378420.1| protein YebC [Escherichia coli H591]
gi|331683370|ref|ZP_08383971.1| protein YebC [Escherichia coli H299]
gi|366157443|ref|ZP_09457305.1| hypothetical protein ETW09_00745 [Escherichia sp. TW09308]
gi|378712692|ref|YP_005277585.1| hypothetical protein [Escherichia coli KO11FL]
gi|386599662|ref|YP_006101168.1| YebC/PmpR family DNA-binding regulatory protein [Escherichia coli
IHE3034]
gi|386604169|ref|YP_006110469.1| hypothetical protein UM146_07830 [Escherichia coli UM146]
gi|386609253|ref|YP_006124739.1| hypothetical protein ECW_m2040 [Escherichia coli W]
gi|386619450|ref|YP_006139030.1| hypothetical protein ECNA114_1928 [Escherichia coli NA114]
gi|386624493|ref|YP_006144221.1| hypothetical protein CE10_2150 [Escherichia coli O7:K1 str. CE10]
gi|386629566|ref|YP_006149286.1| hypothetical protein i02_2094 [Escherichia coli str. 'clone D
i2']
gi|386634486|ref|YP_006154205.1| hypothetical protein i14_2094 [Escherichia coli str. 'clone D
i14']
gi|386639391|ref|YP_006106189.1| hypothetical protein ECABU_c21260 [Escherichia coli ABU 83972]
gi|386701164|ref|YP_006165001.1| hypothetical protein KO11_13375 [Escherichia coli KO11FL]
gi|386709726|ref|YP_006173447.1| hypothetical protein WFL_10010 [Escherichia coli W]
gi|387507113|ref|YP_006159369.1| hypothetical protein ECO55CA74_11150 [Escherichia coli O55:H7
str. RM12579]
gi|387607484|ref|YP_006096340.1| hypothetical protein EC042_2031 [Escherichia coli 042]
gi|387612352|ref|YP_006115468.1| hypothetical protein ETEC_1897 [Escherichia coli ETEC H10407]
gi|387617203|ref|YP_006120225.1| hypothetical protein NRG857_09345 [Escherichia coli O83:H1 str.
NRG 857C]
gi|387829777|ref|YP_003349714.1| hypothetical protein ECSF_1724 [Escherichia coli SE15]
gi|387882972|ref|YP_006313274.1| hypothetical protein CDCO157_2409 [Escherichia coli Xuzhou21]
gi|404375227|ref|ZP_10980415.1| UPF0082 protein yebC [Escherichia sp. 1_1_43]
gi|407469668|ref|YP_006783889.1| hypothetical protein O3O_15015 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407481668|ref|YP_006778817.1| hypothetical protein O3K_10610 [Escherichia coli O104:H4 str.
2011C-3493]
gi|410482218|ref|YP_006769764.1| hypothetical protein O3M_10585 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415792287|ref|ZP_11495812.1| hypothetical protein ECEPECA14_5459 [Escherichia coli EPECa14]
gi|415818037|ref|ZP_11507953.1| hypothetical protein ECOK1180_0650 [Escherichia coli OK1180]
gi|415826112|ref|ZP_11513387.1| hypothetical protein ECOK1357_0309 [Escherichia coli OK1357]
gi|415842459|ref|ZP_11523133.1| hypothetical protein ECRN5871_4929 [Escherichia coli RN587/1]
gi|416312377|ref|ZP_11657578.1| protein of unknown function DUF28 [Escherichia coli O157:H7 str.
1044]
gi|416323092|ref|ZP_11664701.1| hypothetical protein ECoD_05063 [Escherichia coli O157:H7 str.
EC1212]
gi|416327347|ref|ZP_11667354.1| hypothetical protein ECF_02227 [Escherichia coli O157:H7 str.
1125]
gi|416337528|ref|ZP_11673891.1| hypothetical protein EcoM_03340 [Escherichia coli WV_060327]
gi|416346900|ref|ZP_11679991.1| hypothetical protein ECoL_05064 [Escherichia coli EC4100B]
gi|416773952|ref|ZP_11873946.1| hypothetical protein ECO5101_14689 [Escherichia coli O157:H7 str.
G5101]
gi|416785955|ref|ZP_11878851.1| hypothetical protein ECO9389_19185 [Escherichia coli O157:H- str.
493-89]
gi|416796934|ref|ZP_11883768.1| hypothetical protein ECO2687_06392 [Escherichia coli O157:H- str.
H 2687]
gi|416808378|ref|ZP_11888423.1| hypothetical protein ECO7815_20070 [Escherichia coli O55:H7 str.
3256-97]
gi|416827632|ref|ZP_11897648.1| hypothetical protein ECO5905_21790 [Escherichia coli O55:H7 str.
USDA 5905]
gi|416829012|ref|ZP_11898306.1| hypothetical protein ECOSU61_18914 [Escherichia coli O157:H7 str.
LSU-61]
gi|416897791|ref|ZP_11927439.1| hypothetical protein ECSTEC7V_2238 [Escherichia coli STEC_7v]
gi|417084808|ref|ZP_11952447.1| hypothetical protein i01_02456 [Escherichia coli cloneA_i1]
gi|417114814|ref|ZP_11965950.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 1.2741]
gi|417134785|ref|ZP_11979570.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 5.0588]
gi|417138133|ref|ZP_11981866.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 97.0259]
gi|417154810|ref|ZP_11992939.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 96.0497]
gi|417195346|ref|ZP_12015760.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 4.0522]
gi|417206986|ref|ZP_12019621.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli JB1-95]
gi|417221828|ref|ZP_12025268.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 96.154]
gi|417247755|ref|ZP_12040511.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 9.0111]
gi|417265982|ref|ZP_12053351.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 3.3884]
gi|417283908|ref|ZP_12071205.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 3003]
gi|417287338|ref|ZP_12074625.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli TW07793]
gi|417298098|ref|ZP_12085340.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 900105 (10e)]
gi|417308336|ref|ZP_12095189.1| hypothetical protein PPECC33_17610 [Escherichia coli PCN033]
gi|417581342|ref|ZP_12232147.1| hypothetical protein ECSTECB2F1_1998 [Escherichia coli STEC_B2F1]
gi|417586745|ref|ZP_12237517.1| hypothetical protein ECSTECC16502_2372 [Escherichia coli
STEC_C165-02]
gi|417592017|ref|ZP_12242716.1| hypothetical protein EC253486_2615 [Escherichia coli 2534-86]
gi|417596996|ref|ZP_12247644.1| hypothetical protein EC30301_2132 [Escherichia coli 3030-1]
gi|417602461|ref|ZP_12253031.1| hypothetical protein ECSTEC94C_2250 [Escherichia coli STEC_94C]
gi|417662456|ref|ZP_12312037.1| hypothetical protein ECAA86_02033 [Escherichia coli AA86]
gi|417667253|ref|ZP_12316801.1| hypothetical protein ECSTECO31_2057 [Escherichia coli STEC_O31]
gi|417755911|ref|ZP_12403995.1| hypothetical protein ECDEC2B_2228 [Escherichia coli DEC2B]
gi|417805385|ref|ZP_12452341.1| hypothetical protein HUSEC_10504 [Escherichia coli O104:H4 str.
LB226692]
gi|417833106|ref|ZP_12479554.1| hypothetical protein HUSEC41_10092 [Escherichia coli O104:H4 str.
01-09591]
gi|417865256|ref|ZP_12510300.1| hypothetical protein C22711_2188 [Escherichia coli O104:H4 str.
C227-11]
gi|418945655|ref|ZP_13498423.1| hypothetical protein T22_20634 [Escherichia coli O157:H43 str.
T22]
gi|418997100|ref|ZP_13544700.1| hypothetical protein ECDEC1A_2016 [Escherichia coli DEC1A]
gi|419002325|ref|ZP_13549861.1| hypothetical protein ECDEC1B_2222 [Escherichia coli DEC1B]
gi|419007919|ref|ZP_13555359.1| hypothetical protein ECDEC1C_2225 [Escherichia coli DEC1C]
gi|419013700|ref|ZP_13561055.1| hypothetical protein ECDEC1D_2548 [Escherichia coli DEC1D]
gi|419018530|ref|ZP_13565841.1| hypothetical protein ECDEC1E_2229 [Escherichia coli DEC1E]
gi|419024172|ref|ZP_13571403.1| hypothetical protein ECDEC2A_2300 [Escherichia coli DEC2A]
gi|419029218|ref|ZP_13576390.1| hypothetical protein ECDEC2C_2256 [Escherichia coli DEC2C]
gi|419034822|ref|ZP_13581913.1| hypothetical protein ECDEC2D_2063 [Escherichia coli DEC2D]
gi|419039817|ref|ZP_13586858.1| hypothetical protein ECDEC2E_2129 [Escherichia coli DEC2E]
gi|419045506|ref|ZP_13592452.1| hypothetical protein ECDEC3A_2467 [Escherichia coli DEC3A]
gi|419051402|ref|ZP_13598283.1| hypothetical protein ECDEC3B_2692 [Escherichia coli DEC3B]
gi|419057403|ref|ZP_13604218.1| hypothetical protein ECDEC3C_2980 [Escherichia coli DEC3C]
gi|419062783|ref|ZP_13609522.1| hypothetical protein ECDEC3D_2569 [Escherichia coli DEC3D]
gi|419069684|ref|ZP_13615320.1| hypothetical protein ECDEC3E_2757 [Escherichia coli DEC3E]
gi|419075674|ref|ZP_13621205.1| hypothetical protein ECDEC3F_2762 [Escherichia coli DEC3F]
gi|419080919|ref|ZP_13626376.1| hypothetical protein ECDEC4A_2514 [Escherichia coli DEC4A]
gi|419086553|ref|ZP_13631923.1| hypothetical protein ECDEC4B_2472 [Escherichia coli DEC4B]
gi|419092478|ref|ZP_13637771.1| hypothetical protein ECDEC4C_2558 [Escherichia coli DEC4C]
gi|419098368|ref|ZP_13643581.1| hypothetical protein ECDEC4D_2473 [Escherichia coli DEC4D]
gi|419104177|ref|ZP_13649318.1| hypothetical protein ECDEC4E_2486 [Escherichia coli DEC4E]
gi|419109729|ref|ZP_13654796.1| hypothetical protein ECDEC4F_2542 [Escherichia coli DEC4F]
gi|419115071|ref|ZP_13660092.1| hypothetical protein ECDEC5A_2237 [Escherichia coli DEC5A]
gi|419120683|ref|ZP_13665649.1| hypothetical protein ECDEC5B_2497 [Escherichia coli DEC5B]
gi|419126146|ref|ZP_13671035.1| hypothetical protein ECDEC5C_2311 [Escherichia coli DEC5C]
gi|419131801|ref|ZP_13676642.1| hypothetical protein ECDEC5D_2551 [Escherichia coli DEC5D]
gi|419136685|ref|ZP_13681484.1| hypothetical protein ECDEC5E_2177 [Escherichia coli DEC5E]
gi|419159367|ref|ZP_13703876.1| hypothetical protein ECDEC6D_2172 [Escherichia coli DEC6D]
gi|419164587|ref|ZP_13709044.1| hypothetical protein ECDEC6E_2303 [Escherichia coli DEC6E]
gi|419197265|ref|ZP_13740658.1| hypothetical protein ECDEC8A_2366 [Escherichia coli DEC8A]
gi|419203720|ref|ZP_13746915.1| hypothetical protein ECDEC8B_2600 [Escherichia coli DEC8B]
gi|419209782|ref|ZP_13752869.1| hypothetical protein ECDEC8C_2987 [Escherichia coli DEC8C]
gi|419215852|ref|ZP_13758854.1| hypothetical protein ECDEC8D_2609 [Escherichia coli DEC8D]
gi|419221660|ref|ZP_13764590.1| hypothetical protein ECDEC8E_2457 [Escherichia coli DEC8E]
gi|419226961|ref|ZP_13769826.1| hypothetical protein ECDEC9A_2368 [Escherichia coli DEC9A]
gi|419232489|ref|ZP_13775270.1| hypothetical protein ECDEC9B_2066 [Escherichia coli DEC9B]
gi|419238079|ref|ZP_13780804.1| hypothetical protein ECDEC9C_2294 [Escherichia coli DEC9C]
gi|419243518|ref|ZP_13786159.1| hypothetical protein ECDEC9D_2091 [Escherichia coli DEC9D]
gi|419249340|ref|ZP_13791929.1| hypothetical protein ECDEC9E_2564 [Escherichia coli DEC9E]
gi|419255138|ref|ZP_13797660.1| hypothetical protein ECDEC10A_2649 [Escherichia coli DEC10A]
gi|419261356|ref|ZP_13803781.1| hypothetical protein ECDEC10B_2935 [Escherichia coli DEC10B]
gi|419267479|ref|ZP_13809836.1| hypothetical protein ECDEC10C_2980 [Escherichia coli DEC10C]
gi|419272850|ref|ZP_13815151.1| hypothetical protein ECDEC10D_2601 [Escherichia coli DEC10D]
gi|419278240|ref|ZP_13820494.1| hypothetical protein ECDEC10E_2188 [Escherichia coli DEC10E]
gi|419284293|ref|ZP_13826476.1| hypothetical protein ECDEC10F_2952 [Escherichia coli DEC10F]
gi|419345495|ref|ZP_13886873.1| hypothetical protein ECDEC13A_2052 [Escherichia coli DEC13A]
gi|419349916|ref|ZP_13891260.1| hypothetical protein ECDEC13B_1855 [Escherichia coli DEC13B]
gi|419355312|ref|ZP_13896574.1| hypothetical protein ECDEC13C_2340 [Escherichia coli DEC13C]
gi|419360338|ref|ZP_13901559.1| hypothetical protein ECDEC13D_2110 [Escherichia coli DEC13D]
gi|419365444|ref|ZP_13906609.1| hypothetical protein ECDEC13E_2149 [Escherichia coli DEC13E]
gi|419370288|ref|ZP_13911409.1| hypothetical protein ECDEC14A_2030 [Escherichia coli DEC14A]
gi|419375738|ref|ZP_13916767.1| hypothetical protein ECDEC14B_2311 [Escherichia coli DEC14B]
gi|419381054|ref|ZP_13922010.1| hypothetical protein ECDEC14C_2206 [Escherichia coli DEC14C]
gi|419386329|ref|ZP_13927210.1| hypothetical protein ECDEC14D_2133 [Escherichia coli DEC14D]
gi|419391796|ref|ZP_13932611.1| hypothetical protein ECDEC15A_2395 [Escherichia coli DEC15A]
gi|419396868|ref|ZP_13937638.1| hypothetical protein ECDEC15B_2161 [Escherichia coli DEC15B]
gi|419402202|ref|ZP_13942927.1| hypothetical protein ECDEC15C_2114 [Escherichia coli DEC15C]
gi|419407344|ref|ZP_13948035.1| hypothetical protein ECDEC15D_2046 [Escherichia coli DEC15D]
gi|419412884|ref|ZP_13953539.1| hypothetical protein ECDEC15E_2387 [Escherichia coli DEC15E]
gi|419700659|ref|ZP_14228265.1| hypothetical protein OQA_08891 [Escherichia coli SCI-07]
gi|419806026|ref|ZP_14331146.1| hypothetical protein ECAI27_27830 [Escherichia coli AI27]
gi|419878119|ref|ZP_14399596.1| hypothetical protein ECO9534_04133 [Escherichia coli O111:H11
str. CVM9534]
gi|419880416|ref|ZP_14401810.1| hypothetical protein ECO9545_17796 [Escherichia coli O111:H11
str. CVM9545]
gi|419887878|ref|ZP_14408430.1| hypothetical protein ECO9570_00789 [Escherichia coli O111:H8 str.
CVM9570]
gi|419897213|ref|ZP_14416806.1| hypothetical protein ECO9574_14381 [Escherichia coli O111:H8 str.
CVM9574]
gi|419901587|ref|ZP_14420913.1| hypothetical protein ECO9942_13401 [Escherichia coli O26:H11 str.
CVM9942]
gi|419905429|ref|ZP_14424396.1| hypothetical protein ECO10026_11534 [Escherichia coli O26:H11
str. CVM10026]
gi|419916403|ref|ZP_14434712.1| hypothetical protein ECKD2_00871 [Escherichia coli KD2]
gi|419932434|ref|ZP_14449744.1| hypothetical protein EC5761_02699 [Escherichia coli 576-1]
gi|419946697|ref|ZP_14463086.1| hypothetical protein ECHM605_21513 [Escherichia coli HM605]
gi|419950152|ref|ZP_14466372.1| hypothetical protein ECMT8_12321 [Escherichia coli CUMT8]
gi|420091476|ref|ZP_14603223.1| hypothetical protein ECO9602_08029 [Escherichia coli O111:H8 str.
CVM9602]
gi|420093740|ref|ZP_14605375.1| hypothetical protein ECO9634_01889 [Escherichia coli O111:H8 str.
CVM9634]
gi|420107896|ref|ZP_14618206.1| hypothetical protein ECO9553_05125 [Escherichia coli O111:H11
str. CVM9553]
gi|420114030|ref|ZP_14623718.1| hypothetical protein ECO10021_23826 [Escherichia coli O26:H11
str. CVM10021]
gi|420123691|ref|ZP_14632572.1| hypothetical protein ECO10030_13154 [Escherichia coli O26:H11
str. CVM10030]
gi|420127872|ref|ZP_14636452.1| hypothetical protein ECO10224_20870 [Escherichia coli O26:H11
str. CVM10224]
gi|420133840|ref|ZP_14642010.1| hypothetical protein ECO9952_10429 [Escherichia coli O26:H11 str.
CVM9952]
gi|420269774|ref|ZP_14772146.1| hypothetical protein ECPA22_2714 [Escherichia coli PA22]
gi|420275629|ref|ZP_14777930.1| hypothetical protein ECPA40_2870 [Escherichia coli PA40]
gi|420280898|ref|ZP_14783145.1| hypothetical protein ECTW06591_2331 [Escherichia coli TW06591]
gi|420286783|ref|ZP_14788980.1| hypothetical protein ECTW10246_2906 [Escherichia coli TW10246]
gi|420292611|ref|ZP_14794743.1| hypothetical protein ECTW11039_2735 [Escherichia coli TW11039]
gi|420298397|ref|ZP_14800460.1| hypothetical protein ECTW09109_2861 [Escherichia coli TW09109]
gi|420304034|ref|ZP_14806041.1| hypothetical protein ECTW10119_2965 [Escherichia coli TW10119]
gi|420309667|ref|ZP_14811611.1| hypothetical protein ECEC1738_2719 [Escherichia coli EC1738]
gi|420315113|ref|ZP_14816996.1| hypothetical protein ECEC1734_2591 [Escherichia coli EC1734]
gi|421812546|ref|ZP_16248293.1| hypothetical protein EC80416_2327 [Escherichia coli 8.0416]
gi|421818580|ref|ZP_16254092.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 10.0821]
gi|421824201|ref|ZP_16259595.1| hypothetical protein ECFRIK920_2616 [Escherichia coli FRIK920]
gi|421831088|ref|ZP_16266386.1| hypothetical protein ECPA7_3231 [Escherichia coli PA7]
gi|422335206|ref|ZP_16416207.1| UPF0082 protein yebC [Escherichia coli 4_1_47FAA]
gi|422359615|ref|ZP_16440252.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
110-3]
gi|422366978|ref|ZP_16447435.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
153-1]
gi|422371680|ref|ZP_16452055.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
16-3]
gi|422375819|ref|ZP_16456081.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
60-1]
gi|422381555|ref|ZP_16461719.1| hypothetical protein HMPREF9532_03086 [Escherichia coli MS 57-2]
gi|422749090|ref|ZP_16803002.1| yebC [Escherichia coli H252]
gi|422755201|ref|ZP_16809026.1| yebC [Escherichia coli H263]
gi|422761110|ref|ZP_16814869.1| yebC [Escherichia coli E1167]
gi|422766430|ref|ZP_16820157.1| yebC [Escherichia coli E1520]
gi|422781233|ref|ZP_16834018.1| yebC [Escherichia coli TW10509]
gi|422786454|ref|ZP_16839193.1| yebC [Escherichia coli H489]
gi|422799154|ref|ZP_16847653.1| yebC [Escherichia coli M863]
gi|422805875|ref|ZP_16854307.1| yebC [Escherichia fergusonii B253]
gi|422829268|ref|ZP_16877435.1| hypothetical protein ESNG_01940 [Escherichia coli B093]
gi|422835825|ref|ZP_16883877.1| hypothetical protein ESOG_03478 [Escherichia coli E101]
gi|422838218|ref|ZP_16886191.1| hypothetical protein ESPG_00877 [Escherichia coli H397]
gi|422956758|ref|ZP_16969232.1| UPF0082 protein yebC [Escherichia coli H494]
gi|422973351|ref|ZP_16975735.1| UPF0082 protein yebC [Escherichia coli TA124]
gi|422987918|ref|ZP_16978694.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. C227-11]
gi|422994799|ref|ZP_16985563.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. C236-11]
gi|422999939|ref|ZP_16990693.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 09-7901]
gi|423003550|ref|ZP_16994296.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 04-8351]
gi|423010115|ref|ZP_17000853.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-3677]
gi|423019342|ref|ZP_17010051.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4404]
gi|423024508|ref|ZP_17015205.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4522]
gi|423030325|ref|ZP_17021013.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4623]
gi|423038157|ref|ZP_17028831.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423043277|ref|ZP_17033944.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045019|ref|ZP_17035680.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423053552|ref|ZP_17042360.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423060516|ref|ZP_17049312.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423705851|ref|ZP_17680234.1| UPF0082 protein yebC [Escherichia coli B799]
gi|423711550|ref|ZP_17685859.1| hypothetical protein ECPA31_2549 [Escherichia coli PA31]
gi|424077705|ref|ZP_17814759.1| hypothetical protein ECFDA505_2680 [Escherichia coli FDA505]
gi|424084081|ref|ZP_17820642.1| hypothetical protein ECFDA517_2937 [Escherichia coli FDA517]
gi|424090501|ref|ZP_17826529.1| hypothetical protein ECFRIK1996_2720 [Escherichia coli FRIK1996]
gi|424097026|ref|ZP_17832446.1| hypothetical protein ECFRIK1985_2830 [Escherichia coli FRIK1985]
gi|424103365|ref|ZP_17838241.1| hypothetical protein ECFRIK1990_2834 [Escherichia coli FRIK1990]
gi|424110088|ref|ZP_17844407.1| hypothetical protein EC93001_2833 [Escherichia coli 93-001]
gi|424115794|ref|ZP_17849725.1| hypothetical protein ECPA3_2611 [Escherichia coli PA3]
gi|424122163|ref|ZP_17855576.1| hypothetical protein ECPA5_2671 [Escherichia coli PA5]
gi|424128288|ref|ZP_17861264.1| hypothetical protein ECPA9_2789 [Escherichia coli PA9]
gi|424134479|ref|ZP_17867025.1| hypothetical protein ECPA10_2821 [Escherichia coli PA10]
gi|424141118|ref|ZP_17873096.1| hypothetical protein ECPA14_2778 [Escherichia coli PA14]
gi|424147545|ref|ZP_17879006.1| hypothetical protein ECPA15_2905 [Escherichia coli PA15]
gi|424153478|ref|ZP_17884493.1| hypothetical protein ECPA24_2585 [Escherichia coli PA24]
gi|424235971|ref|ZP_17889944.1| hypothetical protein ECPA25_2448 [Escherichia coli PA25]
gi|424313558|ref|ZP_17895851.1| hypothetical protein ECPA28_2792 [Escherichia coli PA28]
gi|424449901|ref|ZP_17901675.1| hypothetical protein ECPA32_2728 [Escherichia coli PA32]
gi|424456070|ref|ZP_17907298.1| hypothetical protein ECPA33_2722 [Escherichia coli PA33]
gi|424462377|ref|ZP_17912947.1| hypothetical protein ECPA39_2709 [Escherichia coli PA39]
gi|424468775|ref|ZP_17918689.1| hypothetical protein ECPA41_2729 [Escherichia coli PA41]
gi|424475360|ref|ZP_17924769.1| hypothetical protein ECPA42_2875 [Escherichia coli PA42]
gi|424481101|ref|ZP_17930143.1| hypothetical protein ECTW07945_2666 [Escherichia coli TW07945]
gi|424487280|ref|ZP_17935907.1| hypothetical protein ECTW09098_2750 [Escherichia coli TW09098]
gi|424493689|ref|ZP_17941593.1| hypothetical protein ECTW09195_2774 [Escherichia coli TW09195]
gi|424500544|ref|ZP_17947544.1| hypothetical protein ECEC4203_2687 [Escherichia coli EC4203]
gi|424506699|ref|ZP_17953212.1| hypothetical protein ECEC4196_2655 [Escherichia coli EC4196]
gi|424514186|ref|ZP_17958964.1| hypothetical protein ECTW14313_2628 [Escherichia coli TW14313]
gi|424520477|ref|ZP_17964671.1| hypothetical protein ECTW14301_2575 [Escherichia coli TW14301]
gi|424526385|ref|ZP_17970169.1| hypothetical protein ECEC4421_2661 [Escherichia coli EC4421]
gi|424532550|ref|ZP_17975955.1| hypothetical protein ECEC4422_2794 [Escherichia coli EC4422]
gi|424538552|ref|ZP_17981569.1| hypothetical protein ECEC4013_2890 [Escherichia coli EC4013]
gi|424544519|ref|ZP_17987043.1| hypothetical protein ECEC4402_2674 [Escherichia coli EC4402]
gi|424550784|ref|ZP_17992731.1| hypothetical protein ECEC4439_2626 [Escherichia coli EC4439]
gi|424557030|ref|ZP_17998507.1| hypothetical protein ECEC4436_2608 [Escherichia coli EC4436]
gi|424563378|ref|ZP_18004436.1| hypothetical protein ECEC4437_2763 [Escherichia coli EC4437]
gi|424569451|ref|ZP_18010102.1| hypothetical protein ECEC4448_2654 [Escherichia coli EC4448]
gi|424575577|ref|ZP_18015750.1| hypothetical protein ECEC1845_2602 [Escherichia coli EC1845]
gi|424581436|ref|ZP_18021158.1| hypothetical protein ECEC1863_2336 [Escherichia coli EC1863]
gi|424753409|ref|ZP_18181366.1| hypothetical protein CFSAN001629_23766 [Escherichia coli O26:H11
str. CFSAN001629]
gi|424760791|ref|ZP_18188396.1| hypothetical protein CFSAN001630_14427 [Escherichia coli O111:H11
str. CFSAN001630]
gi|424770392|ref|ZP_18197597.1| hypothetical protein CFSAN001632_09937 [Escherichia coli O111:H8
str. CFSAN001632]
gi|424815973|ref|ZP_18241124.1| hypothetical protein ECD227_1090 [Escherichia fergusonii ECD227]
gi|425098283|ref|ZP_18501077.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 3.4870]
gi|425104463|ref|ZP_18506828.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 5.2239]
gi|425110293|ref|ZP_18512290.1| hypothetical protein EC60172_2880 [Escherichia coli 6.0172]
gi|425126082|ref|ZP_18527346.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 8.0586]
gi|425131938|ref|ZP_18532841.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 8.2524]
gi|425138306|ref|ZP_18538775.1| hypothetical protein EC100833_2799 [Escherichia coli 10.0833]
gi|425144265|ref|ZP_18544326.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 10.0869]
gi|425150332|ref|ZP_18550013.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 88.0221]
gi|425156178|ref|ZP_18555505.1| hypothetical protein ECPA34_2772 [Escherichia coli PA34]
gi|425162690|ref|ZP_18561629.1| hypothetical protein ECFDA506_3131 [Escherichia coli FDA506]
gi|425168363|ref|ZP_18566909.1| hypothetical protein ECFDA507_2808 [Escherichia coli FDA507]
gi|425174452|ref|ZP_18572623.1| hypothetical protein ECFDA504_2761 [Escherichia coli FDA504]
gi|425180393|ref|ZP_18578173.1| hypothetical protein ECFRIK1999_2867 [Escherichia coli FRIK1999]
gi|425186630|ref|ZP_18583989.1| hypothetical protein ECFRIK1997_2899 [Escherichia coli FRIK1997]
gi|425193499|ref|ZP_18590348.1| hypothetical protein ECNE1487_3132 [Escherichia coli NE1487]
gi|425199889|ref|ZP_18596207.1| hypothetical protein ECNE037_3066 [Escherichia coli NE037]
gi|425206337|ref|ZP_18602217.1| hypothetical protein ECFRIK2001_3132 [Escherichia coli FRIK2001]
gi|425212073|ref|ZP_18607559.1| hypothetical protein ECPA4_2854 [Escherichia coli PA4]
gi|425218202|ref|ZP_18613248.1| hypothetical protein ECPA23_2732 [Escherichia coli PA23]
gi|425224718|ref|ZP_18619281.1| hypothetical protein ECPA49_2838 [Escherichia coli PA49]
gi|425230952|ref|ZP_18625080.1| hypothetical protein ECPA45_2858 [Escherichia coli PA45]
gi|425237102|ref|ZP_18630861.1| hypothetical protein ECTT12B_2742 [Escherichia coli TT12B]
gi|425243165|ref|ZP_18636545.1| hypothetical protein ECMA6_2904 [Escherichia coli MA6]
gi|425249323|ref|ZP_18642319.1| hypothetical protein EC5905_2968 [Escherichia coli 5905]
gi|425255101|ref|ZP_18647693.1| hypothetical protein ECCB7326_2726 [Escherichia coli CB7326]
gi|425261388|ref|ZP_18653475.1| hypothetical protein ECEC96038_2650 [Escherichia coli EC96038]
gi|425267427|ref|ZP_18659111.1| hypothetical protein EC5412_2706 [Escherichia coli 5412]
gi|425278112|ref|ZP_18669376.1| hypothetical protein ECARS42123_2224 [Escherichia coli ARS4.2123]
gi|425294881|ref|ZP_18685165.1| hypothetical protein ECPA38_2628 [Escherichia coli PA38]
gi|425300633|ref|ZP_18690577.1| hypothetical protein EC07798_2490 [Escherichia coli 07798]
gi|425311568|ref|ZP_18700813.1| hypothetical protein ECEC1735_2722 [Escherichia coli EC1735]
gi|425317495|ref|ZP_18706348.1| hypothetical protein ECEC1736_2612 [Escherichia coli EC1736]
gi|425323600|ref|ZP_18712033.1| hypothetical protein ECEC1737_2622 [Escherichia coli EC1737]
gi|425329763|ref|ZP_18717730.1| hypothetical protein ECEC1846_2586 [Escherichia coli EC1846]
gi|425335930|ref|ZP_18723420.1| hypothetical protein ECEC1847_2599 [Escherichia coli EC1847]
gi|425342355|ref|ZP_18729335.1| hypothetical protein ECEC1848_2786 [Escherichia coli EC1848]
gi|425348166|ref|ZP_18734738.1| hypothetical protein ECEC1849_2539 [Escherichia coli EC1849]
gi|425354467|ref|ZP_18740612.1| hypothetical protein ECEC1850_2773 [Escherichia coli EC1850]
gi|425360439|ref|ZP_18746172.1| hypothetical protein ECEC1856_2606 [Escherichia coli EC1856]
gi|425366565|ref|ZP_18751851.1| hypothetical protein ECEC1862_2598 [Escherichia coli EC1862]
gi|425372987|ref|ZP_18757722.1| hypothetical protein ECEC1864_2776 [Escherichia coli EC1864]
gi|425379641|ref|ZP_18763752.1| hypothetical protein ECEC1865_2712 [Escherichia coli EC1865]
gi|425385812|ref|ZP_18769460.1| hypothetical protein ECEC1866_2454 [Escherichia coli EC1866]
gi|425392500|ref|ZP_18775699.1| hypothetical protein ECEC1868_2787 [Escherichia coli EC1868]
gi|425398655|ref|ZP_18781444.1| hypothetical protein ECEC1869_2783 [Escherichia coli EC1869]
gi|425404687|ref|ZP_18787018.1| hypothetical protein ECEC1870_2528 [Escherichia coli EC1870]
gi|425411264|ref|ZP_18793107.1| hypothetical protein ECNE098_2886 [Escherichia coli NE098]
gi|425417572|ref|ZP_18798917.1| hypothetical protein ECFRIK523_2731 [Escherichia coli FRIK523]
gi|425428826|ref|ZP_18809520.1| hypothetical protein EC01304_2838 [Escherichia coli 0.1304]
gi|428947186|ref|ZP_19019573.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 88.1467]
gi|428953422|ref|ZP_19025271.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 88.1042]
gi|428959343|ref|ZP_19030723.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 89.0511]
gi|428965796|ref|ZP_19036653.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 90.0091]
gi|428971522|ref|ZP_19041941.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 90.0039]
gi|428978172|ref|ZP_19048061.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 90.2281]
gi|428983990|ref|ZP_19053445.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 93.0055]
gi|428990169|ref|ZP_19059216.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 93.0056]
gi|428995942|ref|ZP_19064623.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 94.0618]
gi|429002065|ref|ZP_19070304.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 95.0183]
gi|429008313|ref|ZP_19075915.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 95.1288]
gi|429014800|ref|ZP_19081769.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 95.0943]
gi|429020634|ref|ZP_19087209.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0428]
gi|429026715|ref|ZP_19092810.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0427]
gi|429032789|ref|ZP_19098395.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0939]
gi|429038934|ref|ZP_19104124.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0932]
gi|429044827|ref|ZP_19109594.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0107]
gi|429050417|ref|ZP_19115017.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 97.0003]
gi|429055656|ref|ZP_19120048.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 97.1742]
gi|429061300|ref|ZP_19125367.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 97.0007]
gi|429067390|ref|ZP_19130936.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0672]
gi|429073395|ref|ZP_19136686.1| hypothetical protein EC990678_2500 [Escherichia coli 99.0678]
gi|429078720|ref|ZP_19141884.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0713]
gi|429719374|ref|ZP_19254313.1| hypothetical protein MO3_02098 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429724717|ref|ZP_19259584.1| hypothetical protein MO5_00703 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429776422|ref|ZP_19308404.1| hypothetical protein C212_01023 [Escherichia coli O104:H4 str.
11-02030]
gi|429781197|ref|ZP_19313129.1| hypothetical protein C213_01019 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783456|ref|ZP_19315372.1| hypothetical protein C214_01020 [Escherichia coli O104:H4 str.
11-02092]
gi|429790828|ref|ZP_19322686.1| hypothetical protein C215_01020 [Escherichia coli O104:H4 str.
11-02093]
gi|429796560|ref|ZP_19328379.1| hypothetical protein C216_01020 [Escherichia coli O104:H4 str.
11-02281]
gi|429798253|ref|ZP_19330055.1| hypothetical protein C217_01020 [Escherichia coli O104:H4 str.
11-02318]
gi|429806766|ref|ZP_19338494.1| hypothetical protein C218_01020 [Escherichia coli O104:H4 str.
11-02913]
gi|429811114|ref|ZP_19342815.1| hypothetical protein C219_01019 [Escherichia coli O104:H4 str.
11-03439]
gi|429817186|ref|ZP_19348828.1| hypothetical protein C220_01020 [Escherichia coli O104:H4 str.
11-04080]
gi|429822397|ref|ZP_19353996.1| hypothetical protein C221_01019 [Escherichia coli O104:H4 str.
11-03943]
gi|429826640|ref|ZP_19357776.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0109]
gi|429832913|ref|ZP_19363393.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 97.0010]
gi|429912914|ref|ZP_19378870.1| hypothetical protein MO7_00686 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429913786|ref|ZP_19379734.1| hypothetical protein O7C_00675 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429918828|ref|ZP_19384761.1| hypothetical protein O7E_00692 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429924635|ref|ZP_19390549.1| hypothetical protein O7G_01495 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429928573|ref|ZP_19394475.1| hypothetical protein O7I_00369 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429935125|ref|ZP_19401012.1| hypothetical protein O7K_01937 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429940796|ref|ZP_19406670.1| hypothetical protein O7M_02499 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429948429|ref|ZP_19414284.1| hypothetical protein O7O_05032 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429951074|ref|ZP_19416922.1| hypothetical protein S7Y_02497 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429954370|ref|ZP_19420206.1| hypothetical protein S91_00744 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432353779|ref|ZP_19597053.1| hypothetical protein WCA_02752 [Escherichia coli KTE2]
gi|432358195|ref|ZP_19601424.1| hypothetical protein WCC_02145 [Escherichia coli KTE4]
gi|432362821|ref|ZP_19605992.1| hypothetical protein WCE_01841 [Escherichia coli KTE5]
gi|432372536|ref|ZP_19615581.1| hypothetical protein WCO_01560 [Escherichia coli KTE11]
gi|432377015|ref|ZP_19620012.1| hypothetical protein WCQ_01888 [Escherichia coli KTE12]
gi|432381529|ref|ZP_19624474.1| hypothetical protein WCU_01671 [Escherichia coli KTE15]
gi|432387345|ref|ZP_19630235.1| hypothetical protein WCY_02593 [Escherichia coli KTE16]
gi|432392273|ref|ZP_19635113.1| hypothetical protein WE9_02586 [Escherichia coli KTE21]
gi|432397657|ref|ZP_19640438.1| hypothetical protein WEI_02576 [Escherichia coli KTE25]
gi|432402132|ref|ZP_19644885.1| hypothetical protein WEK_02315 [Escherichia coli KTE26]
gi|432406873|ref|ZP_19649582.1| hypothetical protein WEO_02057 [Escherichia coli KTE28]
gi|432412078|ref|ZP_19654744.1| hypothetical protein WG9_02557 [Escherichia coli KTE39]
gi|432422126|ref|ZP_19664674.1| hypothetical protein A137_02543 [Escherichia coli KTE178]
gi|432426303|ref|ZP_19668808.1| hypothetical protein A139_01689 [Escherichia coli KTE181]
gi|432432073|ref|ZP_19674505.1| hypothetical protein A13K_02358 [Escherichia coli KTE187]
gi|432435969|ref|ZP_19678362.1| hypothetical protein A13M_01677 [Escherichia coli KTE188]
gi|432441275|ref|ZP_19683616.1| hypothetical protein A13O_02096 [Escherichia coli KTE189]
gi|432446395|ref|ZP_19688694.1| hypothetical protein A13S_02431 [Escherichia coli KTE191]
gi|432449879|ref|ZP_19692151.1| hypothetical protein A13W_00826 [Escherichia coli KTE193]
gi|432456890|ref|ZP_19699077.1| hypothetical protein A15C_02676 [Escherichia coli KTE201]
gi|432460920|ref|ZP_19703071.1| hypothetical protein A15I_01787 [Escherichia coli KTE204]
gi|432465851|ref|ZP_19707942.1| hypothetical protein A15K_01789 [Escherichia coli KTE205]
gi|432471161|ref|ZP_19713208.1| hypothetical protein A15M_02042 [Escherichia coli KTE206]
gi|432476043|ref|ZP_19718043.1| hypothetical protein A15Q_02227 [Escherichia coli KTE208]
gi|432485621|ref|ZP_19727537.1| hypothetical protein A15Y_02100 [Escherichia coli KTE212]
gi|432489474|ref|ZP_19731355.1| hypothetical protein A171_01393 [Escherichia coli KTE213]
gi|432495923|ref|ZP_19737722.1| hypothetical protein A173_03082 [Escherichia coli KTE214]
gi|432500218|ref|ZP_19741978.1| hypothetical protein A177_02308 [Escherichia coli KTE216]
gi|432504590|ref|ZP_19746320.1| hypothetical protein A17E_01643 [Escherichia coli KTE220]
gi|432514096|ref|ZP_19751322.1| hypothetical protein A17M_01948 [Escherichia coli KTE224]
gi|432517933|ref|ZP_19755125.1| hypothetical protein A17U_00895 [Escherichia coli KTE228]
gi|432523964|ref|ZP_19761096.1| hypothetical protein A17Y_02076 [Escherichia coli KTE230]
gi|432534112|ref|ZP_19771090.1| hypothetical protein A193_02548 [Escherichia coli KTE234]
gi|432538031|ref|ZP_19774934.1| hypothetical protein A195_01644 [Escherichia coli KTE235]
gi|432543379|ref|ZP_19780228.1| hypothetical protein A197_01960 [Escherichia coli KTE236]
gi|432548869|ref|ZP_19785643.1| hypothetical protein A199_02330 [Escherichia coli KTE237]
gi|432553822|ref|ZP_19790549.1| hypothetical protein A1S3_02216 [Escherichia coli KTE47]
gi|432558945|ref|ZP_19795623.1| hypothetical protein A1S7_02591 [Escherichia coli KTE49]
gi|432568857|ref|ZP_19805375.1| hypothetical protein A1SE_02437 [Escherichia coli KTE53]
gi|432573893|ref|ZP_19810375.1| hypothetical protein A1SI_02587 [Escherichia coli KTE55]
gi|432584005|ref|ZP_19820404.1| hypothetical protein A1SM_03225 [Escherichia coli KTE57]
gi|432588121|ref|ZP_19824477.1| hypothetical protein A1SO_02471 [Escherichia coli KTE58]
gi|432593079|ref|ZP_19829397.1| hypothetical protein A1SS_02497 [Escherichia coli KTE60]
gi|432597842|ref|ZP_19834118.1| hypothetical protein A1SW_02555 [Escherichia coli KTE62]
gi|432602389|ref|ZP_19838633.1| hypothetical protein A1U5_02224 [Escherichia coli KTE66]
gi|432607686|ref|ZP_19843875.1| hypothetical protein A1U7_02684 [Escherichia coli KTE67]
gi|432611598|ref|ZP_19847761.1| hypothetical protein A1UG_01951 [Escherichia coli KTE72]
gi|432616830|ref|ZP_19852951.1| hypothetical protein A1UM_02263 [Escherichia coli KTE75]
gi|432622066|ref|ZP_19858100.1| hypothetical protein A1UO_01937 [Escherichia coli KTE76]
gi|432631603|ref|ZP_19867532.1| hypothetical protein A1UW_01976 [Escherichia coli KTE80]
gi|432641248|ref|ZP_19877085.1| hypothetical protein A1W1_02109 [Escherichia coli KTE83]
gi|432646362|ref|ZP_19882152.1| hypothetical protein A1W5_02107 [Escherichia coli KTE86]
gi|432651299|ref|ZP_19887056.1| hypothetical protein A1W7_02300 [Escherichia coli KTE87]
gi|432655940|ref|ZP_19891646.1| hypothetical protein A1WE_02051 [Escherichia coli KTE93]
gi|432666233|ref|ZP_19901815.1| hypothetical protein A1Y3_02832 [Escherichia coli KTE116]
gi|432670946|ref|ZP_19906477.1| hypothetical protein A1Y7_02482 [Escherichia coli KTE119]
gi|432680445|ref|ZP_19915822.1| hypothetical protein A1YW_02189 [Escherichia coli KTE143]
gi|432694609|ref|ZP_19929816.1| hypothetical protein A31I_02081 [Escherichia coli KTE162]
gi|432699216|ref|ZP_19934374.1| hypothetical protein A31M_01958 [Escherichia coli KTE169]
gi|432710771|ref|ZP_19945833.1| hypothetical protein WCG_04100 [Escherichia coli KTE6]
gi|432713572|ref|ZP_19948613.1| hypothetical protein WCI_01937 [Escherichia coli KTE8]
gi|432718985|ref|ZP_19953954.1| hypothetical protein WCK_02598 [Escherichia coli KTE9]
gi|432723281|ref|ZP_19958201.1| hypothetical protein WE1_02310 [Escherichia coli KTE17]
gi|432727868|ref|ZP_19962747.1| hypothetical protein WE3_02312 [Escherichia coli KTE18]
gi|432732551|ref|ZP_19967384.1| hypothetical protein WGK_02393 [Escherichia coli KTE45]
gi|432741559|ref|ZP_19976278.1| hypothetical protein WEE_02240 [Escherichia coli KTE23]
gi|432745840|ref|ZP_19980509.1| hypothetical protein WGG_01941 [Escherichia coli KTE43]
gi|432750334|ref|ZP_19984941.1| hypothetical protein WEQ_01751 [Escherichia coli KTE29]
gi|432754603|ref|ZP_19989154.1| hypothetical protein WEA_01578 [Escherichia coli KTE22]
gi|432759635|ref|ZP_19994130.1| hypothetical protein A1S1_01752 [Escherichia coli KTE46]
gi|432765220|ref|ZP_19999659.1| hypothetical protein A1S5_02778 [Escherichia coli KTE48]
gi|432770831|ref|ZP_20005175.1| hypothetical protein A1S9_03629 [Escherichia coli KTE50]
gi|432774953|ref|ZP_20009235.1| hypothetical protein A1SG_03038 [Escherichia coli KTE54]
gi|432778733|ref|ZP_20012976.1| hypothetical protein A1SQ_02396 [Escherichia coli KTE59]
gi|432783742|ref|ZP_20017923.1| hypothetical protein A1SY_02581 [Escherichia coli KTE63]
gi|432787679|ref|ZP_20021811.1| hypothetical protein A1U3_01789 [Escherichia coli KTE65]
gi|432793071|ref|ZP_20027156.1| hypothetical protein A1US_02284 [Escherichia coli KTE78]
gi|432799028|ref|ZP_20033051.1| hypothetical protein A1UU_03767 [Escherichia coli KTE79]
gi|432802017|ref|ZP_20035998.1| hypothetical protein A1W3_02272 [Escherichia coli KTE84]
gi|432809526|ref|ZP_20043419.1| hypothetical protein A1WM_00679 [Escherichia coli KTE101]
gi|432815563|ref|ZP_20049348.1| hypothetical protein A1Y1_01964 [Escherichia coli KTE115]
gi|432821116|ref|ZP_20054808.1| hypothetical protein A1Y5_02710 [Escherichia coli KTE118]
gi|432827260|ref|ZP_20060912.1| hypothetical protein A1YA_03975 [Escherichia coli KTE123]
gi|432831844|ref|ZP_20065418.1| hypothetical protein A1YM_03630 [Escherichia coli KTE135]
gi|432834857|ref|ZP_20068396.1| hypothetical protein A1YO_02210 [Escherichia coli KTE136]
gi|432839489|ref|ZP_20072976.1| hypothetical protein A1YQ_02447 [Escherichia coli KTE140]
gi|432844738|ref|ZP_20077637.1| hypothetical protein A1YS_02377 [Escherichia coli KTE141]
gi|432850851|ref|ZP_20081546.1| hypothetical protein A1YY_01675 [Escherichia coli KTE144]
gi|432869067|ref|ZP_20089862.1| hypothetical protein A313_00671 [Escherichia coli KTE147]
gi|432886806|ref|ZP_20100895.1| hypothetical protein A31C_02610 [Escherichia coli KTE158]
gi|432894680|ref|ZP_20106501.1| hypothetical protein A31K_03643 [Escherichia coli KTE165]
gi|432898839|ref|ZP_20109531.1| hypothetical protein A13U_02287 [Escherichia coli KTE192]
gi|432905028|ref|ZP_20113934.1| hypothetical protein A13Y_02300 [Escherichia coli KTE194]
gi|432912907|ref|ZP_20118717.1| hypothetical protein A13Q_02327 [Escherichia coli KTE190]
gi|432919285|ref|ZP_20123416.1| hypothetical protein A133_02328 [Escherichia coli KTE173]
gi|432927092|ref|ZP_20128632.1| hypothetical protein A135_02677 [Escherichia coli KTE175]
gi|432938044|ref|ZP_20136421.1| hypothetical protein A13C_00840 [Escherichia coli KTE183]
gi|432961885|ref|ZP_20151675.1| hypothetical protein A15E_02593 [Escherichia coli KTE202]
gi|432967988|ref|ZP_20156903.1| hypothetical protein A15G_03087 [Escherichia coli KTE203]
gi|432972019|ref|ZP_20160887.1| hypothetical protein A15O_02590 [Escherichia coli KTE207]
gi|432978465|ref|ZP_20167287.1| hypothetical protein A15S_04380 [Escherichia coli KTE209]
gi|432981269|ref|ZP_20170045.1| hypothetical protein A15W_02393 [Escherichia coli KTE211]
gi|432985548|ref|ZP_20174272.1| hypothetical protein A175_01997 [Escherichia coli KTE215]
gi|432990869|ref|ZP_20179533.1| hypothetical protein A179_02643 [Escherichia coli KTE217]
gi|432995524|ref|ZP_20184135.1| hypothetical protein A17A_02607 [Escherichia coli KTE218]
gi|433000100|ref|ZP_20188630.1| hypothetical protein A17K_02434 [Escherichia coli KTE223]
gi|433005312|ref|ZP_20193742.1| hypothetical protein A17S_02879 [Escherichia coli KTE227]
gi|433007810|ref|ZP_20196228.1| hypothetical protein A17W_00510 [Escherichia coli KTE229]
gi|433014000|ref|ZP_20202362.1| hypothetical protein WI5_01825 [Escherichia coli KTE104]
gi|433018825|ref|ZP_20207070.1| hypothetical protein WI7_01870 [Escherichia coli KTE105]
gi|433023629|ref|ZP_20211630.1| hypothetical protein WI9_01795 [Escherichia coli KTE106]
gi|433028794|ref|ZP_20216655.1| hypothetical protein WIA_01886 [Escherichia coli KTE109]
gi|433033604|ref|ZP_20221336.1| hypothetical protein WIC_02177 [Escherichia coli KTE112]
gi|433038784|ref|ZP_20226388.1| hypothetical protein WIE_02128 [Escherichia coli KTE113]
gi|433053371|ref|ZP_20240566.1| hypothetical protein WIK_02179 [Escherichia coli KTE122]
gi|433058248|ref|ZP_20245307.1| hypothetical protein WIM_02017 [Escherichia coli KTE124]
gi|433063259|ref|ZP_20250192.1| hypothetical protein WIO_02079 [Escherichia coli KTE125]
gi|433068148|ref|ZP_20254949.1| hypothetical protein WIQ_02030 [Escherichia coli KTE128]
gi|433072973|ref|ZP_20259638.1| hypothetical protein WIS_01928 [Escherichia coli KTE129]
gi|433077942|ref|ZP_20264493.1| hypothetical protein WIU_01813 [Escherichia coli KTE131]
gi|433082728|ref|ZP_20269193.1| hypothetical protein WIW_01870 [Escherichia coli KTE133]
gi|433087395|ref|ZP_20273779.1| hypothetical protein WIY_01843 [Escherichia coli KTE137]
gi|433096684|ref|ZP_20282881.1| hypothetical protein WK3_01886 [Escherichia coli KTE139]
gi|433101319|ref|ZP_20287416.1| hypothetical protein WK5_01874 [Escherichia coli KTE145]
gi|433106048|ref|ZP_20292039.1| hypothetical protein WK7_01915 [Escherichia coli KTE148]
gi|433111080|ref|ZP_20296945.1| hypothetical protein WK9_01943 [Escherichia coli KTE150]
gi|433115713|ref|ZP_20301517.1| hypothetical protein WKA_01902 [Escherichia coli KTE153]
gi|433120402|ref|ZP_20306080.1| hypothetical protein WKC_01825 [Escherichia coli KTE157]
gi|433125350|ref|ZP_20310925.1| hypothetical protein WKE_01846 [Escherichia coli KTE160]
gi|433139413|ref|ZP_20324684.1| hypothetical protein WKM_01694 [Escherichia coli KTE167]
gi|433144393|ref|ZP_20329545.1| hypothetical protein WKO_01926 [Escherichia coli KTE168]
gi|433149361|ref|ZP_20334397.1| hypothetical protein WKQ_02012 [Escherichia coli KTE174]
gi|433153930|ref|ZP_20338885.1| hypothetical protein WKS_01858 [Escherichia coli KTE176]
gi|433158897|ref|ZP_20343744.1| hypothetical protein WKU_01971 [Escherichia coli KTE177]
gi|433163640|ref|ZP_20348385.1| hypothetical protein WKW_01845 [Escherichia coli KTE179]
gi|433168761|ref|ZP_20353394.1| hypothetical protein WKY_01999 [Escherichia coli KTE180]
gi|433173729|ref|ZP_20358263.1| hypothetical protein WGQ_01990 [Escherichia coli KTE232]
gi|433178510|ref|ZP_20362922.1| hypothetical protein WGM_02151 [Escherichia coli KTE82]
gi|433183422|ref|ZP_20367687.1| hypothetical protein WGO_01860 [Escherichia coli KTE85]
gi|433188594|ref|ZP_20372697.1| hypothetical protein WGS_01665 [Escherichia coli KTE88]
gi|433198425|ref|ZP_20382337.1| hypothetical protein WGW_01969 [Escherichia coli KTE94]
gi|433203442|ref|ZP_20387223.1| hypothetical protein WGY_02023 [Escherichia coli KTE95]
gi|433208021|ref|ZP_20391702.1| hypothetical protein WI1_01785 [Escherichia coli KTE97]
gi|433212664|ref|ZP_20396267.1| hypothetical protein WI3_01843 [Escherichia coli KTE99]
gi|433323101|ref|ZP_20400471.1| hypothetical protein B185_006557 [Escherichia coli J96]
gi|442598191|ref|ZP_21015964.1| FIG000859: hypothetical protein YebC [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|442604533|ref|ZP_21019378.1| FIG000859: hypothetical protein YebC [Escherichia coli Nissle
1917]
gi|444925080|ref|ZP_21244486.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 09BKT078844]
gi|444930930|ref|ZP_21250016.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0814]
gi|444936223|ref|ZP_21255060.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0815]
gi|444941856|ref|ZP_21260430.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0816]
gi|444947388|ref|ZP_21265743.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0839]
gi|444953050|ref|ZP_21271191.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0848]
gi|444958555|ref|ZP_21276455.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1753]
gi|444963670|ref|ZP_21281329.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1775]
gi|444969603|ref|ZP_21287010.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1793]
gi|444974944|ref|ZP_21292126.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1805]
gi|444980439|ref|ZP_21297382.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli ATCC 700728]
gi|444985761|ref|ZP_21302576.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA11]
gi|444991047|ref|ZP_21307729.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA19]
gi|444996247|ref|ZP_21312786.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA13]
gi|445001881|ref|ZP_21318299.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA2]
gi|445007344|ref|ZP_21323627.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA47]
gi|445012459|ref|ZP_21328600.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA48]
gi|445018198|ref|ZP_21334193.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA8]
gi|445023849|ref|ZP_21339707.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 7.1982]
gi|445029090|ref|ZP_21344802.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1781]
gi|445034533|ref|ZP_21350095.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1762]
gi|445040250|ref|ZP_21355656.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA35]
gi|445045370|ref|ZP_21360662.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 3.4880]
gi|445050968|ref|ZP_21366062.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 95.0083]
gi|445056778|ref|ZP_21371667.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0670]
gi|450215912|ref|ZP_21895592.1| hypothetical protein C202_09046 [Escherichia coli O08]
gi|452968381|ref|ZP_21966608.1| hypothetical protein EC4009_RS06815 [Escherichia coli O157:H7
str. EC4009]
gi|54040166|sp|P67176.1|YEBC_ECO57 RecName: Full=Probable transcriptional regulatory protein YebC
gi|54042647|sp|P67175.1|YEBC_ECOL6 RecName: Full=Probable transcriptional regulatory protein YebC
gi|118577828|sp|Q0TGW8.1|YEBC_ECOL5 RecName: Full=Probable transcriptional regulatory protein YebC
gi|119392016|sp|Q1RAS0.1|YEBC_ECOUT RecName: Full=Probable transcriptional regulatory protein YebC
gi|12515920|gb|AAG56854.1|AE005408_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26108533|gb|AAN80735.1|AE016761_310 Protein yebC [Escherichia coli CFT073]
gi|13362042|dbj|BAB35997.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|91072663|gb|ABE07544.1| hypothetical protein UTI89_C2068 [Escherichia coli UTI89]
gi|110343574|gb|ABG69811.1| putative cytoplasmic protein [Escherichia coli 536]
gi|115513140|gb|ABJ01215.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157067013|gb|ABV06268.1| conserved hypothetical protein TIGR01033 [Escherichia coli HS]
gi|157078967|gb|ABV18675.1| conserved hypothetical protein TIGR01033 [Escherichia coli
E24377A]
gi|170520953|gb|ACB19131.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187768083|gb|EDU31927.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188017405|gb|EDU55527.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188487542|gb|EDU62645.1| conserved hypothetical protein TIGR01033 [Escherichia coli 53638]
gi|188999493|gb|EDU68479.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189355163|gb|EDU73582.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189360282|gb|EDU78701.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189367318|gb|EDU85734.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189370673|gb|EDU89089.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189376041|gb|EDU94457.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|190906708|gb|EDV66313.1| conserved hypothetical protein [Escherichia coli F11]
gi|208725024|gb|EDZ74731.1| conserved hypothetical protein TIGR01033 [Escherichia coli
O157:H7 str. EC4206]
gi|208731253|gb|EDZ79942.1| conserved hypothetical protein TIGR01033 [Escherichia coli
O157:H7 str. EC4045]
gi|208740613|gb|EDZ88295.1| conserved hypothetical protein TIGR01033 [Escherichia coli
O157:H7 str. EC4042]
gi|209161743|gb|ACI39176.1| conserved hypothetical protein TIGR01033 [Escherichia coli
O157:H7 str. EC4115]
gi|209767438|gb|ACI82031.1| hypothetical protein ECs2574 [Escherichia coli]
gi|209767440|gb|ACI82032.1| hypothetical protein ECs2574 [Escherichia coli]
gi|209767442|gb|ACI82033.1| hypothetical protein ECs2574 [Escherichia coli]
gi|209767444|gb|ACI82034.1| hypothetical protein ECs2574 [Escherichia coli]
gi|209767446|gb|ACI82035.1| hypothetical protein ECs2574 [Escherichia coli]
gi|215265149|emb|CAS09537.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|217318093|gb|EEC26520.1| conserved hypothetical protein TIGR01033 [Escherichia coli
O157:H7 str. TW14588]
gi|218352162|emb|CAU97901.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218356116|emb|CAQ88733.1| conserved hypothetical protein [Escherichia fergusonii ATCC
35469]
gi|218361220|emb|CAQ98804.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|218365498|emb|CAR03225.1| conserved hypothetical protein [Escherichia coli S88]
gi|218369550|emb|CAR17319.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218427366|emb|CAR08261.2| conserved hypothetical protein [Escherichia coli ED1a]
gi|218432462|emb|CAR13355.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|222033613|emb|CAP76354.1| UPF0082 protein yebC [Escherichia coli LF82]
gi|226900575|gb|EEH86834.1| yebC [Escherichia sp. 3_2_53FAA]
gi|227837281|gb|EEJ47747.1| conserved hypothetical protein [Escherichia coli 83972]
gi|242377585|emb|CAQ32340.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253324223|gb|ACT28825.1| protein of unknown function DUF28 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973825|gb|ACT39496.1| hypothetical protein ECB_01835 [Escherichia coli B str. REL606]
gi|253978019|gb|ACT43689.1| hypothetical protein ECD_01835 [Escherichia coli BL21(DE3)]
gi|254592888|gb|ACT72249.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|257754453|dbj|BAI25955.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257764755|dbj|BAI36250.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|281178934|dbj|BAI55264.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284921784|emb|CBG34857.1| conserved hypothetical protein [Escherichia coli 042]
gi|290762919|gb|ADD56880.1| UPF0082 protein yebC [Escherichia coli O55:H7 str. CB9615]
gi|291427567|gb|EFF00594.1| UPF0082 protein yebC [Escherichia coli FVEC1412]
gi|291432827|gb|EFF05806.1| hypothetical protein ECDG_01735 [Escherichia coli B185]
gi|291470644|gb|EFF13128.1| hypothetical protein ECEG_01132 [Escherichia coli B354]
gi|294491341|gb|ADE90097.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli IHE3034]
gi|298278443|gb|EFI19957.1| yebC protein [Escherichia coli FVEC1302]
gi|300297537|gb|EFJ53922.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
185-1]
gi|300307324|gb|EFJ61844.1| hypothetical protein HMPREF9553_02062 [Escherichia coli MS 200-1]
gi|300357271|gb|EFJ73141.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
198-1]
gi|300399736|gb|EFJ83274.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
69-1]
gi|300406369|gb|EFJ89907.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
45-1]
gi|300418889|gb|EFK02200.1| hypothetical protein HMPREF9548_03065 [Escherichia coli MS 182-1]
gi|300458951|gb|EFK22444.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
21-1]
gi|300463123|gb|EFK26616.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
187-1]
gi|300523265|gb|EFK44334.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
119-7]
gi|300845801|gb|EFK73561.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
78-1]
gi|305852465|gb|EFM52916.1| hypothetical protein ECNC101_19736 [Escherichia coli NC101]
gi|306906193|gb|EFN36711.1| protein of unknown function DUF28 [Escherichia coli W]
gi|307553883|gb|ADN46658.1| conserved hypothetical protein [Escherichia coli ABU 83972]
gi|307626653|gb|ADN70957.1| hypothetical protein UM146_07830 [Escherichia coli UM146]
gi|309702088|emb|CBJ01402.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|312288531|gb|EFR16433.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312946464|gb|ADR27291.1| hypothetical protein NRG857_09345 [Escherichia coli O83:H1 str.
NRG 857C]
gi|315061170|gb|ADT75497.1| conserved protein [Escherichia coli W]
gi|315286567|gb|EFU46002.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
110-3]
gi|315290343|gb|EFU49719.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
153-1]
gi|315296555|gb|EFU55852.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
16-3]
gi|320188565|gb|EFW63227.1| hypothetical protein ECoD_05063 [Escherichia coli O157:H7 str.
EC1212]
gi|320194420|gb|EFW69051.1| hypothetical protein EcoM_03340 [Escherichia coli WV_060327]
gi|320198058|gb|EFW72666.1| hypothetical protein ECoL_05064 [Escherichia coli EC4100B]
gi|320641718|gb|EFX11106.1| hypothetical protein ECO5101_14689 [Escherichia coli O157:H7 str.
G5101]
gi|320647078|gb|EFX15911.1| hypothetical protein ECO9389_19185 [Escherichia coli O157:H- str.
493-89]
gi|320652361|gb|EFX20659.1| hypothetical protein ECO2687_06392 [Escherichia coli O157:H- str.
H 2687]
gi|320657962|gb|EFX25724.1| hypothetical protein ECO7815_20070 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320658535|gb|EFX26229.1| hypothetical protein ECO5905_21790 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320668433|gb|EFX35260.1| hypothetical protein ECOSU61_18914 [Escherichia coli O157:H7 str.
LSU-61]
gi|323152647|gb|EFZ38923.1| hypothetical protein ECEPECA14_5459 [Escherichia coli EPECa14]
gi|323180661|gb|EFZ66206.1| hypothetical protein ECOK1180_0650 [Escherichia coli OK1180]
gi|323186360|gb|EFZ71710.1| hypothetical protein ECOK1357_0309 [Escherichia coli OK1357]
gi|323186872|gb|EFZ72191.1| hypothetical protein ECRN5871_4929 [Escherichia coli RN587/1]
gi|323378253|gb|ADX50521.1| protein of unknown function DUF28 [Escherichia coli KO11FL]
gi|323937122|gb|EGB33402.1| yebC [Escherichia coli E1520]
gi|323952366|gb|EGB48239.1| yebC [Escherichia coli H252]
gi|323956495|gb|EGB52237.1| yebC [Escherichia coli H263]
gi|323961919|gb|EGB57518.1| yebC [Escherichia coli H489]
gi|323968286|gb|EGB63693.1| yebC [Escherichia coli M863]
gi|323977951|gb|EGB73037.1| yebC [Escherichia coli TW10509]
gi|324007229|gb|EGB76448.1| hypothetical protein HMPREF9532_03086 [Escherichia coli MS 57-2]
gi|324012867|gb|EGB82086.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
60-1]
gi|324113600|gb|EGC07575.1| yebC [Escherichia fergusonii B253]
gi|324118924|gb|EGC12813.1| yebC [Escherichia coli E1167]
gi|325496993|gb|EGC94852.1| hypothetical protein ECD227_1090 [Escherichia fergusonii ECD227]
gi|326342244|gb|EGD66025.1| protein of unknown function DUF28 [Escherichia coli O157:H7 str.
1044]
gi|326343794|gb|EGD67556.1| hypothetical protein ECF_02227 [Escherichia coli O157:H7 str.
1125]
gi|327252993|gb|EGE64647.1| hypothetical protein ECSTEC7V_2238 [Escherichia coli STEC_7v]
gi|330911674|gb|EGH40184.1| hypothetical protein ECAA86_02033 [Escherichia coli AA86]
gi|331056161|gb|EGI28170.1| protein YebC [Escherichia coli TA206]
gi|331063753|gb|EGI35664.1| protein YebC [Escherichia coli TA271]
gi|331069592|gb|EGI40979.1| protein YebC [Escherichia coli TA280]
gi|331074205|gb|EGI45525.1| protein YebC [Escherichia coli H591]
gi|331079585|gb|EGI50782.1| protein YebC [Escherichia coli H299]
gi|333969951|gb|AEG36756.1| hypothetical protein ECNA114_1928 [Escherichia coli NA114]
gi|338770186|gb|EGP24953.1| hypothetical protein PPECC33_17610 [Escherichia coli PCN033]
gi|340733988|gb|EGR63118.1| hypothetical protein HUSEC41_10092 [Escherichia coli O104:H4 str.
01-09591]
gi|340740288|gb|EGR74513.1| hypothetical protein HUSEC_10504 [Escherichia coli O104:H4 str.
LB226692]
gi|341918545|gb|EGT68158.1| hypothetical protein C22711_2188 [Escherichia coli O104:H4 str.
C227-11]
gi|345338248|gb|EGW70679.1| hypothetical protein ECSTECC16502_2372 [Escherichia coli
STEC_C165-02]
gi|345339965|gb|EGW72390.1| hypothetical protein ECSTECB2F1_1998 [Escherichia coli STEC_B2F1]
gi|345340677|gb|EGW73095.1| hypothetical protein EC253486_2615 [Escherichia coli 2534-86]
gi|345350127|gb|EGW82402.1| hypothetical protein ECSTEC94C_2250 [Escherichia coli STEC_94C]
gi|345355308|gb|EGW87519.1| hypothetical protein EC30301_2132 [Escherichia coli 3030-1]
gi|349738231|gb|AEQ12937.1| conserved protein, UPF0082 family [Escherichia coli O7:K1 str.
CE10]
gi|354861634|gb|EHF22072.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. C236-11]
gi|354868987|gb|EHF29399.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. C227-11]
gi|354871083|gb|EHF31483.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 04-8351]
gi|354872910|gb|EHF33287.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 09-7901]
gi|354881483|gb|EHF41813.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-3677]
gi|354891201|gb|EHF51436.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4404]
gi|354894034|gb|EHF54231.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4522]
gi|354896181|gb|EHF56357.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354899156|gb|EHF59306.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4623]
gi|354900891|gb|EHF61023.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354913920|gb|EHF73908.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354917649|gb|EHF77612.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354919590|gb|EHF79533.1| UPF0082 protein yebC [Escherichia coli O104:H4 str. 11-4632 C4]
gi|355351983|gb|EHG01170.1| hypothetical protein i01_02456 [Escherichia coli cloneA_i1]
gi|355420465|gb|AER84662.1| hypothetical protein i02_2094 [Escherichia coli str. 'clone D
i2']
gi|355425385|gb|AER89581.1| hypothetical protein i14_2094 [Escherichia coli str. 'clone D
i14']
gi|371597104|gb|EHN85929.1| UPF0082 protein yebC [Escherichia coli TA124]
gi|371599059|gb|EHN87849.1| UPF0082 protein yebC [Escherichia coli H494]
gi|371610001|gb|EHN98533.1| hypothetical protein ESNG_01940 [Escherichia coli B093]
gi|371611598|gb|EHO00120.1| hypothetical protein ESOG_03478 [Escherichia coli E101]
gi|371614142|gb|EHO02627.1| hypothetical protein ESPG_00877 [Escherichia coli H397]
gi|373243807|gb|EHP63305.1| UPF0082 protein yebC [Escherichia coli 4_1_47FAA]
gi|374359107|gb|AEZ40814.1| hypothetical protein ECO55CA74_11150 [Escherichia coli O55:H7
str. RM12579]
gi|375319029|gb|EHS65307.1| hypothetical protein T22_20634 [Escherichia coli O157:H43 str.
T22]
gi|377845717|gb|EHU10739.1| hypothetical protein ECDEC1A_2016 [Escherichia coli DEC1A]
gi|377846428|gb|EHU11440.1| hypothetical protein ECDEC1C_2225 [Escherichia coli DEC1C]
gi|377849376|gb|EHU14350.1| hypothetical protein ECDEC1B_2222 [Escherichia coli DEC1B]
gi|377858684|gb|EHU23523.1| hypothetical protein ECDEC1D_2548 [Escherichia coli DEC1D]
gi|377862260|gb|EHU27073.1| hypothetical protein ECDEC1E_2229 [Escherichia coli DEC1E]
gi|377865653|gb|EHU30444.1| hypothetical protein ECDEC2A_2300 [Escherichia coli DEC2A]
gi|377876162|gb|EHU40770.1| hypothetical protein ECDEC2B_2228 [Escherichia coli DEC2B]
gi|377880256|gb|EHU44827.1| hypothetical protein ECDEC2C_2256 [Escherichia coli DEC2C]
gi|377881892|gb|EHU46449.1| hypothetical protein ECDEC2D_2063 [Escherichia coli DEC2D]
gi|377894068|gb|EHU58493.1| hypothetical protein ECDEC2E_2129 [Escherichia coli DEC2E]
gi|377895103|gb|EHU59516.1| hypothetical protein ECDEC3A_2467 [Escherichia coli DEC3A]
gi|377895726|gb|EHU60137.1| hypothetical protein ECDEC3B_2692 [Escherichia coli DEC3B]
gi|377906684|gb|EHU70926.1| hypothetical protein ECDEC3C_2980 [Escherichia coli DEC3C]
gi|377912020|gb|EHU76185.1| hypothetical protein ECDEC3D_2569 [Escherichia coli DEC3D]
gi|377914742|gb|EHU78864.1| hypothetical protein ECDEC3E_2757 [Escherichia coli DEC3E]
gi|377923291|gb|EHU87258.1| hypothetical protein ECDEC3F_2762 [Escherichia coli DEC3F]
gi|377928401|gb|EHU92312.1| hypothetical protein ECDEC4A_2514 [Escherichia coli DEC4A]
gi|377932973|gb|EHU96819.1| hypothetical protein ECDEC4B_2472 [Escherichia coli DEC4B]
gi|377943767|gb|EHV07476.1| hypothetical protein ECDEC4C_2558 [Escherichia coli DEC4C]
gi|377944684|gb|EHV08386.1| hypothetical protein ECDEC4D_2473 [Escherichia coli DEC4D]
gi|377949990|gb|EHV13621.1| hypothetical protein ECDEC4E_2486 [Escherichia coli DEC4E]
gi|377958936|gb|EHV22448.1| hypothetical protein ECDEC4F_2542 [Escherichia coli DEC4F]
gi|377961605|gb|EHV25072.1| hypothetical protein ECDEC5A_2237 [Escherichia coli DEC5A]
gi|377968890|gb|EHV32281.1| hypothetical protein ECDEC5B_2497 [Escherichia coli DEC5B]
gi|377976201|gb|EHV39512.1| hypothetical protein ECDEC5C_2311 [Escherichia coli DEC5C]
gi|377977204|gb|EHV40505.1| hypothetical protein ECDEC5D_2551 [Escherichia coli DEC5D]
gi|377985019|gb|EHV48241.1| hypothetical protein ECDEC5E_2177 [Escherichia coli DEC5E]
gi|378009411|gb|EHV72367.1| hypothetical protein ECDEC6D_2172 [Escherichia coli DEC6D]
gi|378010669|gb|EHV73614.1| hypothetical protein ECDEC6E_2303 [Escherichia coli DEC6E]
gi|378048577|gb|EHW10931.1| hypothetical protein ECDEC8A_2366 [Escherichia coli DEC8A]
gi|378050431|gb|EHW12759.1| hypothetical protein ECDEC8B_2600 [Escherichia coli DEC8B]
gi|378055013|gb|EHW17281.1| hypothetical protein ECDEC8C_2987 [Escherichia coli DEC8C]
gi|378062336|gb|EHW24513.1| hypothetical protein ECDEC8D_2609 [Escherichia coli DEC8D]
gi|378067147|gb|EHW29273.1| hypothetical protein ECDEC8E_2457 [Escherichia coli DEC8E]
gi|378076052|gb|EHW38065.1| hypothetical protein ECDEC9A_2368 [Escherichia coli DEC9A]
gi|378078982|gb|EHW40961.1| hypothetical protein ECDEC9B_2066 [Escherichia coli DEC9B]
gi|378084629|gb|EHW46531.1| hypothetical protein ECDEC9C_2294 [Escherichia coli DEC9C]
gi|378092126|gb|EHW53953.1| hypothetical protein ECDEC9D_2091 [Escherichia coli DEC9D]
gi|378096713|gb|EHW58483.1| hypothetical protein ECDEC9E_2564 [Escherichia coli DEC9E]
gi|378101302|gb|EHW62989.1| hypothetical protein ECDEC10A_2649 [Escherichia coli DEC10A]
gi|378107472|gb|EHW69092.1| hypothetical protein ECDEC10B_2935 [Escherichia coli DEC10B]
gi|378112251|gb|EHW73831.1| hypothetical protein ECDEC10C_2980 [Escherichia coli DEC10C]
gi|378117567|gb|EHW79081.1| hypothetical protein ECDEC10D_2601 [Escherichia coli DEC10D]
gi|378129239|gb|EHW90611.1| hypothetical protein ECDEC10E_2188 [Escherichia coli DEC10E]
gi|378133878|gb|EHW95211.1| hypothetical protein ECDEC10F_2952 [Escherichia coli DEC10F]
gi|378187413|gb|EHX48025.1| hypothetical protein ECDEC13A_2052 [Escherichia coli DEC13A]
gi|378202037|gb|EHX62477.1| hypothetical protein ECDEC13C_2340 [Escherichia coli DEC13C]
gi|378202277|gb|EHX62716.1| hypothetical protein ECDEC13B_1855 [Escherichia coli DEC13B]
gi|378205268|gb|EHX65683.1| hypothetical protein ECDEC13D_2110 [Escherichia coli DEC13D]
gi|378213929|gb|EHX74239.1| hypothetical protein ECDEC13E_2149 [Escherichia coli DEC13E]
gi|378218675|gb|EHX78946.1| hypothetical protein ECDEC14A_2030 [Escherichia coli DEC14A]
gi|378220662|gb|EHX80914.1| hypothetical protein ECDEC14B_2311 [Escherichia coli DEC14B]
gi|378229043|gb|EHX89193.1| hypothetical protein ECDEC14C_2206 [Escherichia coli DEC14C]
gi|378232152|gb|EHX92254.1| hypothetical protein ECDEC14D_2133 [Escherichia coli DEC14D]
gi|378238520|gb|EHX98521.1| hypothetical protein ECDEC15A_2395 [Escherichia coli DEC15A]
gi|378245219|gb|EHY05157.1| hypothetical protein ECDEC15B_2161 [Escherichia coli DEC15B]
gi|378248061|gb|EHY07976.1| hypothetical protein ECDEC15C_2114 [Escherichia coli DEC15C]
gi|378255594|gb|EHY15452.1| hypothetical protein ECDEC15D_2046 [Escherichia coli DEC15D]
gi|378259269|gb|EHY19082.1| hypothetical protein ECDEC15E_2387 [Escherichia coli DEC15E]
gi|380348435|gb|EIA36717.1| hypothetical protein OQA_08891 [Escherichia coli SCI-07]
gi|383392691|gb|AFH17649.1| hypothetical protein KO11_13375 [Escherichia coli KO11FL]
gi|383405418|gb|AFH11661.1| hypothetical protein WFL_10010 [Escherichia coli W]
gi|384470997|gb|EIE55088.1| hypothetical protein ECAI27_27830 [Escherichia coli AI27]
gi|385713243|gb|EIG50179.1| UPF0082 protein yebC [Escherichia coli B799]
gi|386140233|gb|EIG81385.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 1.2741]
gi|386152639|gb|EIH03928.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 5.0588]
gi|386158118|gb|EIH14455.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 97.0259]
gi|386167899|gb|EIH34415.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 96.0497]
gi|386189388|gb|EIH78154.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 4.0522]
gi|386197442|gb|EIH91646.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli JB1-95]
gi|386201630|gb|EII00621.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 96.154]
gi|386209122|gb|EII19613.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 9.0111]
gi|386231975|gb|EII59322.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 3.3884]
gi|386243851|gb|EII85584.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 3003]
gi|386249671|gb|EII95842.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli TW07793]
gi|386258366|gb|EIJ13845.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 900105 (10e)]
gi|386796430|gb|AFJ29464.1| hypothetical protein CDCO157_2409 [Escherichia coli Xuzhou21]
gi|388335876|gb|EIL02425.1| hypothetical protein ECO9534_04133 [Escherichia coli O111:H11
str. CVM9534]
gi|388355791|gb|EIL20613.1| hypothetical protein ECO9574_14381 [Escherichia coli O111:H8 str.
CVM9574]
gi|388361795|gb|EIL25872.1| hypothetical protein ECO9570_00789 [Escherichia coli O111:H8 str.
CVM9570]
gi|388369240|gb|EIL32855.1| hypothetical protein ECO9545_17796 [Escherichia coli O111:H11
str. CVM9545]
gi|388375745|gb|EIL38746.1| hypothetical protein ECO9942_13401 [Escherichia coli O26:H11 str.
CVM9942]
gi|388381296|gb|EIL43864.1| hypothetical protein ECO10026_11534 [Escherichia coli O26:H11
str. CVM10026]
gi|388396127|gb|EIL57256.1| hypothetical protein ECKD2_00871 [Escherichia coli KD2]
gi|388412334|gb|EIL72425.1| hypothetical protein ECHM605_21513 [Escherichia coli HM605]
gi|388417349|gb|EIL77203.1| hypothetical protein EC5761_02699 [Escherichia coli 576-1]
gi|388417467|gb|EIL77309.1| hypothetical protein ECMT8_12321 [Escherichia coli CUMT8]
gi|390645108|gb|EIN24292.1| hypothetical protein ECFDA517_2937 [Escherichia coli FDA517]
gi|390645161|gb|EIN24344.1| hypothetical protein ECFRIK1996_2720 [Escherichia coli FRIK1996]
gi|390645982|gb|EIN25120.1| hypothetical protein ECFDA505_2680 [Escherichia coli FDA505]
gi|390663572|gb|EIN41068.1| hypothetical protein EC93001_2833 [Escherichia coli 93-001]
gi|390664884|gb|EIN42212.1| hypothetical protein ECFRIK1985_2830 [Escherichia coli FRIK1985]
gi|390666003|gb|EIN43209.1| hypothetical protein ECFRIK1990_2834 [Escherichia coli FRIK1990]
gi|390681563|gb|EIN57356.1| hypothetical protein ECPA3_2611 [Escherichia coli PA3]
gi|390684606|gb|EIN60217.1| hypothetical protein ECPA5_2671 [Escherichia coli PA5]
gi|390685585|gb|EIN61055.1| hypothetical protein ECPA9_2789 [Escherichia coli PA9]
gi|390701434|gb|EIN75658.1| hypothetical protein ECPA10_2821 [Escherichia coli PA10]
gi|390703085|gb|EIN77136.1| hypothetical protein ECPA15_2905 [Escherichia coli PA15]
gi|390703783|gb|EIN77778.1| hypothetical protein ECPA14_2778 [Escherichia coli PA14]
gi|390715483|gb|EIN88328.1| hypothetical protein ECPA22_2714 [Escherichia coli PA22]
gi|390726927|gb|EIN99355.1| hypothetical protein ECPA25_2448 [Escherichia coli PA25]
gi|390727250|gb|EIN99667.1| hypothetical protein ECPA24_2585 [Escherichia coli PA24]
gi|390729720|gb|EIO01880.1| hypothetical protein ECPA28_2792 [Escherichia coli PA28]
gi|390745140|gb|EIO15960.1| hypothetical protein ECPA32_2728 [Escherichia coli PA32]
gi|390745976|gb|EIO16751.1| hypothetical protein ECPA31_2549 [Escherichia coli PA31]
gi|390747529|gb|EIO18082.1| hypothetical protein ECPA33_2722 [Escherichia coli PA33]
gi|390759410|gb|EIO28808.1| hypothetical protein ECPA40_2870 [Escherichia coli PA40]
gi|390769893|gb|EIO38789.1| hypothetical protein ECPA41_2729 [Escherichia coli PA41]
gi|390771363|gb|EIO40050.1| hypothetical protein ECPA39_2709 [Escherichia coli PA39]
gi|390771827|gb|EIO40482.1| hypothetical protein ECPA42_2875 [Escherichia coli PA42]
gi|390782839|gb|EIO50473.1| hypothetical protein ECTW06591_2331 [Escherichia coli TW06591]
gi|390790963|gb|EIO58358.1| hypothetical protein ECTW10246_2906 [Escherichia coli TW10246]
gi|390796731|gb|EIO63997.1| hypothetical protein ECTW07945_2666 [Escherichia coli TW07945]
gi|390798410|gb|EIO65606.1| hypothetical protein ECTW11039_2735 [Escherichia coli TW11039]
gi|390808587|gb|EIO75426.1| hypothetical protein ECTW09109_2861 [Escherichia coli TW09109]
gi|390809733|gb|EIO76515.1| hypothetical protein ECTW09098_2750 [Escherichia coli TW09098]
gi|390816720|gb|EIO83180.1| hypothetical protein ECTW10119_2965 [Escherichia coli TW10119]
gi|390829251|gb|EIO94859.1| hypothetical protein ECEC4203_2687 [Escherichia coli EC4203]
gi|390832340|gb|EIO97598.1| hypothetical protein ECTW09195_2774 [Escherichia coli TW09195]
gi|390833920|gb|EIO98896.1| hypothetical protein ECEC4196_2655 [Escherichia coli EC4196]
gi|390848965|gb|EIP12413.1| hypothetical protein ECTW14301_2575 [Escherichia coli TW14301]
gi|390850591|gb|EIP13952.1| hypothetical protein ECTW14313_2628 [Escherichia coli TW14313]
gi|390852293|gb|EIP15462.1| hypothetical protein ECEC4421_2661 [Escherichia coli EC4421]
gi|390863639|gb|EIP25771.1| hypothetical protein ECEC4422_2794 [Escherichia coli EC4422]
gi|390867999|gb|EIP29765.1| hypothetical protein ECEC4013_2890 [Escherichia coli EC4013]
gi|390873640|gb|EIP34821.1| hypothetical protein ECEC4402_2674 [Escherichia coli EC4402]
gi|390880512|gb|EIP41188.1| hypothetical protein ECEC4439_2626 [Escherichia coli EC4439]
gi|390885156|gb|EIP45405.1| hypothetical protein ECEC4436_2608 [Escherichia coli EC4436]
gi|390896602|gb|EIP55988.1| hypothetical protein ECEC4437_2763 [Escherichia coli EC4437]
gi|390900554|gb|EIP59773.1| hypothetical protein ECEC4448_2654 [Escherichia coli EC4448]
gi|390901114|gb|EIP60298.1| hypothetical protein ECEC1738_2719 [Escherichia coli EC1738]
gi|390908814|gb|EIP67615.1| hypothetical protein ECEC1734_2591 [Escherichia coli EC1734]
gi|390921247|gb|EIP79470.1| hypothetical protein ECEC1863_2336 [Escherichia coli EC1863]
gi|390922137|gb|EIP80245.1| hypothetical protein ECEC1845_2602 [Escherichia coli EC1845]
gi|394383061|gb|EJE60669.1| hypothetical protein ECO9602_08029 [Escherichia coli O111:H8 str.
CVM9602]
gi|394387417|gb|EJE64844.1| hypothetical protein ECO10224_20870 [Escherichia coli O26:H11
str. CVM10224]
gi|394398253|gb|EJE74440.1| hypothetical protein ECO9634_01889 [Escherichia coli O111:H8 str.
CVM9634]
gi|394410230|gb|EJE84640.1| hypothetical protein ECO10021_23826 [Escherichia coli O26:H11
str. CVM10021]
gi|394411491|gb|EJE85719.1| hypothetical protein ECO9553_05125 [Escherichia coli O111:H11
str. CVM9553]
gi|394416346|gb|EJE90142.1| hypothetical protein ECO10030_13154 [Escherichia coli O26:H11
str. CVM10030]
gi|394424003|gb|EJE97208.1| hypothetical protein ECO9952_10429 [Escherichia coli O26:H11 str.
CVM9952]
gi|397785500|gb|EJK96350.1| hypothetical protein ECSTECO31_2057 [Escherichia coli STEC_O31]
gi|404291288|gb|EJZ48178.1| UPF0082 protein yebC [Escherichia sp. 1_1_43]
gi|406777380|gb|AFS56804.1| hypothetical protein O3M_10585 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407053965|gb|AFS74016.1| hypothetical protein O3K_10610 [Escherichia coli O104:H4 str.
2011C-3493]
gi|407065703|gb|AFS86750.1| hypothetical protein O3O_15015 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408067130|gb|EKH01573.1| hypothetical protein ECPA7_3231 [Escherichia coli PA7]
gi|408070911|gb|EKH05267.1| hypothetical protein ECFRIK920_2616 [Escherichia coli FRIK920]
gi|408076241|gb|EKH10469.1| hypothetical protein ECPA34_2772 [Escherichia coli PA34]
gi|408082015|gb|EKH16007.1| hypothetical protein ECFDA506_3131 [Escherichia coli FDA506]
gi|408084485|gb|EKH18257.1| hypothetical protein ECFDA507_2808 [Escherichia coli FDA507]
gi|408093250|gb|EKH26349.1| hypothetical protein ECFDA504_2761 [Escherichia coli FDA504]
gi|408099120|gb|EKH31774.1| hypothetical protein ECFRIK1999_2867 [Escherichia coli FRIK1999]
gi|408106935|gb|EKH39026.1| hypothetical protein ECFRIK1997_2899 [Escherichia coli FRIK1997]
gi|408110675|gb|EKH42462.1| hypothetical protein ECNE1487_3132 [Escherichia coli NE1487]
gi|408117797|gb|EKH48971.1| hypothetical protein ECNE037_3066 [Escherichia coli NE037]
gi|408123605|gb|EKH54344.1| hypothetical protein ECFRIK2001_3132 [Escherichia coli FRIK2001]
gi|408129595|gb|EKH59814.1| hypothetical protein ECPA4_2854 [Escherichia coli PA4]
gi|408141047|gb|EKH70527.1| hypothetical protein ECPA23_2732 [Escherichia coli PA23]
gi|408142738|gb|EKH72087.1| hypothetical protein ECPA49_2838 [Escherichia coli PA49]
gi|408147855|gb|EKH76764.1| hypothetical protein ECPA45_2858 [Escherichia coli PA45]
gi|408156200|gb|EKH84407.1| hypothetical protein ECTT12B_2742 [Escherichia coli TT12B]
gi|408163324|gb|EKH91191.1| hypothetical protein ECMA6_2904 [Escherichia coli MA6]
gi|408165744|gb|EKH93421.1| hypothetical protein EC5905_2968 [Escherichia coli 5905]
gi|408176669|gb|EKI03506.1| hypothetical protein ECCB7326_2726 [Escherichia coli CB7326]
gi|408183618|gb|EKI10043.1| hypothetical protein ECEC96038_2650 [Escherichia coli EC96038]
gi|408184448|gb|EKI10771.1| hypothetical protein EC5412_2706 [Escherichia coli 5412]
gi|408203037|gb|EKI28095.1| hypothetical protein ECARS42123_2224 [Escherichia coli ARS4.2123]
gi|408216780|gb|EKI41094.1| hypothetical protein EC07798_2490 [Escherichia coli 07798]
gi|408220400|gb|EKI44456.1| hypothetical protein ECPA38_2628 [Escherichia coli PA38]
gi|408229763|gb|EKI53190.1| hypothetical protein ECEC1735_2722 [Escherichia coli EC1735]
gi|408241143|gb|EKI63793.1| hypothetical protein ECEC1736_2612 [Escherichia coli EC1736]
gi|408245176|gb|EKI67569.1| hypothetical protein ECEC1737_2622 [Escherichia coli EC1737]
gi|408249555|gb|EKI71485.1| hypothetical protein ECEC1846_2586 [Escherichia coli EC1846]
gi|408260041|gb|EKI81176.1| hypothetical protein ECEC1847_2599 [Escherichia coli EC1847]
gi|408262023|gb|EKI82976.1| hypothetical protein ECEC1848_2786 [Escherichia coli EC1848]
gi|408267673|gb|EKI88120.1| hypothetical protein ECEC1849_2539 [Escherichia coli EC1849]
gi|408277618|gb|EKI97405.1| hypothetical protein ECEC1850_2773 [Escherichia coli EC1850]
gi|408279913|gb|EKI99496.1| hypothetical protein ECEC1856_2606 [Escherichia coli EC1856]
gi|408291563|gb|EKJ10160.1| hypothetical protein ECEC1862_2598 [Escherichia coli EC1862]
gi|408293903|gb|EKJ12324.1| hypothetical protein ECEC1864_2776 [Escherichia coli EC1864]
gi|408298329|gb|EKJ16275.1| hypothetical protein ECEC1865_2712 [Escherichia coli EC1865]
gi|408310526|gb|EKJ27567.1| hypothetical protein ECEC1868_2787 [Escherichia coli EC1868]
gi|408311377|gb|EKJ28387.1| hypothetical protein ECEC1866_2454 [Escherichia coli EC1866]
gi|408323615|gb|EKJ39577.1| hypothetical protein ECEC1869_2783 [Escherichia coli EC1869]
gi|408328039|gb|EKJ43656.1| hypothetical protein ECNE098_2886 [Escherichia coli NE098]
gi|408328994|gb|EKJ44533.1| hypothetical protein ECEC1870_2528 [Escherichia coli EC1870]
gi|408339111|gb|EKJ53731.1| hypothetical protein ECFRIK523_2731 [Escherichia coli FRIK523]
gi|408348769|gb|EKJ62850.1| hypothetical protein EC01304_2838 [Escherichia coli 0.1304]
gi|408551744|gb|EKK28982.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 5.2239]
gi|408552586|gb|EKK29758.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 3.4870]
gi|408553156|gb|EKK30287.1| hypothetical protein EC60172_2880 [Escherichia coli 6.0172]
gi|408574361|gb|EKK50138.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 8.0586]
gi|408582478|gb|EKK57693.1| hypothetical protein EC100833_2799 [Escherichia coli 10.0833]
gi|408583144|gb|EKK58322.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 8.2524]
gi|408594726|gb|EKK69007.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 10.0869]
gi|408598290|gb|EKK72249.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 88.0221]
gi|408602326|gb|EKK76047.1| hypothetical protein EC80416_2327 [Escherichia coli 8.0416]
gi|408613680|gb|EKK86967.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 10.0821]
gi|421935631|gb|EKT93319.1| hypothetical protein CFSAN001629_23766 [Escherichia coli O26:H11
str. CFSAN001629]
gi|421942590|gb|EKT99917.1| hypothetical protein CFSAN001632_09937 [Escherichia coli O111:H8
str. CFSAN001632]
gi|421945462|gb|EKU02678.1| hypothetical protein CFSAN001630_14427 [Escherichia coli O111:H11
str. CFSAN001630]
gi|427207718|gb|EKV77886.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 88.1042]
gi|427209379|gb|EKV79418.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 89.0511]
gi|427210653|gb|EKV80508.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 88.1467]
gi|427226354|gb|EKV94944.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 90.2281]
gi|427226685|gb|EKV95274.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 90.0091]
gi|427229489|gb|EKV97803.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 90.0039]
gi|427244850|gb|EKW12159.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 93.0056]
gi|427245454|gb|EKW12738.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 93.0055]
gi|427247707|gb|EKW14759.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 94.0618]
gi|427263528|gb|EKW29286.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 95.0943]
gi|427264108|gb|EKW29799.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 95.0183]
gi|427266351|gb|EKW31800.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 95.1288]
gi|427278618|gb|EKW43074.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0428]
gi|427282574|gb|EKW46819.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0427]
gi|427285151|gb|EKW49154.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0939]
gi|427294388|gb|EKW57573.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0932]
gi|427301406|gb|EKW64268.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0107]
gi|427301836|gb|EKW64690.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 97.0003]
gi|427315560|gb|EKW77552.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 97.1742]
gi|427317843|gb|EKW79734.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 97.0007]
gi|427322448|gb|EKW84081.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0672]
gi|427330181|gb|EKW91459.1| hypothetical protein EC990678_2500 [Escherichia coli 99.0678]
gi|427330577|gb|EKW91847.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0713]
gi|429255257|gb|EKY39592.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 96.0109]
gi|429257029|gb|EKY41132.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 97.0010]
gi|429346301|gb|EKY83081.1| hypothetical protein C212_01023 [Escherichia coli O104:H4 str.
11-02030]
gi|429348142|gb|EKY84913.1| hypothetical protein C213_01019 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354843|gb|EKY91539.1| hypothetical protein C214_01020 [Escherichia coli O104:H4 str.
11-02092]
gi|429363043|gb|EKY99687.1| hypothetical protein C215_01020 [Escherichia coli O104:H4 str.
11-02093]
gi|429364942|gb|EKZ01560.1| hypothetical protein C216_01020 [Escherichia coli O104:H4 str.
11-02281]
gi|429366666|gb|EKZ03268.1| hypothetical protein C217_01020 [Escherichia coli O104:H4 str.
11-02318]
gi|429377130|gb|EKZ13655.1| hypothetical protein C218_01020 [Escherichia coli O104:H4 str.
11-02913]
gi|429381641|gb|EKZ18126.1| hypothetical protein C221_01019 [Escherichia coli O104:H4 str.
11-03943]
gi|429384667|gb|EKZ21124.1| hypothetical protein C219_01019 [Escherichia coli O104:H4 str.
11-03439]
gi|429393340|gb|EKZ29736.1| hypothetical protein C220_01020 [Escherichia coli O104:H4 str.
11-04080]
gi|429394031|gb|EKZ30417.1| hypothetical protein MO3_02098 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429407550|gb|EKZ43803.1| hypothetical protein O7C_00675 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429408407|gb|EKZ44645.1| hypothetical protein MO5_00703 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429409853|gb|EKZ46079.1| hypothetical protein O7G_01495 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429426541|gb|EKZ62630.1| hypothetical protein O7M_02499 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429426947|gb|EKZ63034.1| hypothetical protein O7I_00369 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429431511|gb|EKZ67560.1| hypothetical protein O7E_00692 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429433912|gb|EKZ69942.1| hypothetical protein O7K_01937 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429440873|gb|EKZ76850.1| hypothetical protein O7O_05032 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429444451|gb|EKZ80397.1| hypothetical protein S91_00744 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429450080|gb|EKZ85978.1| hypothetical protein S7Y_02497 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429453941|gb|EKZ89809.1| hypothetical protein MO7_00686 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430876020|gb|ELB99541.1| hypothetical protein WCA_02752 [Escherichia coli KTE2]
gi|430878179|gb|ELC01611.1| hypothetical protein WCC_02145 [Escherichia coli KTE4]
gi|430887360|gb|ELC10187.1| hypothetical protein WCE_01841 [Escherichia coli KTE5]
gi|430897029|gb|ELC19256.1| hypothetical protein WCO_01560 [Escherichia coli KTE11]
gi|430899307|gb|ELC21412.1| hypothetical protein WCQ_01888 [Escherichia coli KTE12]
gi|430906738|gb|ELC28243.1| hypothetical protein WCY_02593 [Escherichia coli KTE16]
gi|430908532|gb|ELC29925.1| hypothetical protein WCU_01671 [Escherichia coli KTE15]
gi|430915761|gb|ELC36839.1| hypothetical protein WEI_02576 [Escherichia coli KTE25]
gi|430920090|gb|ELC41010.1| hypothetical protein WE9_02586 [Escherichia coli KTE21]
gi|430926962|gb|ELC47549.1| hypothetical protein WEK_02315 [Escherichia coli KTE26]
gi|430929632|gb|ELC50141.1| hypothetical protein WEO_02057 [Escherichia coli KTE28]
gi|430935304|gb|ELC55626.1| hypothetical protein WG9_02557 [Escherichia coli KTE39]
gi|430944885|gb|ELC64974.1| hypothetical protein A137_02543 [Escherichia coli KTE178]
gi|430953622|gb|ELC72520.1| hypothetical protein A13K_02358 [Escherichia coli KTE187]
gi|430956643|gb|ELC75317.1| hypothetical protein A139_01689 [Escherichia coli KTE181]
gi|430964391|gb|ELC81838.1| hypothetical protein A13M_01677 [Escherichia coli KTE188]
gi|430967116|gb|ELC84478.1| hypothetical protein A13O_02096 [Escherichia coli KTE189]
gi|430972668|gb|ELC89636.1| hypothetical protein A13S_02431 [Escherichia coli KTE191]
gi|430981455|gb|ELC98183.1| hypothetical protein A13W_00826 [Escherichia coli KTE193]
gi|430982772|gb|ELC99461.1| hypothetical protein A15C_02676 [Escherichia coli KTE201]
gi|430989633|gb|ELD06087.1| hypothetical protein A15I_01787 [Escherichia coli KTE204]
gi|430994332|gb|ELD10663.1| hypothetical protein A15K_01789 [Escherichia coli KTE205]
gi|430998379|gb|ELD14620.1| hypothetical protein A15M_02042 [Escherichia coli KTE206]
gi|431005984|gb|ELD20991.1| hypothetical protein A15Q_02227 [Escherichia coli KTE208]
gi|431016018|gb|ELD29565.1| hypothetical protein A15Y_02100 [Escherichia coli KTE212]
gi|431021510|gb|ELD34833.1| hypothetical protein A171_01393 [Escherichia coli KTE213]
gi|431024466|gb|ELD37631.1| hypothetical protein A173_03082 [Escherichia coli KTE214]
gi|431029088|gb|ELD42120.1| hypothetical protein A177_02308 [Escherichia coli KTE216]
gi|431039573|gb|ELD50393.1| hypothetical protein A17E_01643 [Escherichia coli KTE220]
gi|431042694|gb|ELD53182.1| hypothetical protein A17M_01948 [Escherichia coli KTE224]
gi|431051981|gb|ELD61643.1| hypothetical protein A17U_00895 [Escherichia coli KTE228]
gi|431053066|gb|ELD62702.1| hypothetical protein A17Y_02076 [Escherichia coli KTE230]
gi|431061262|gb|ELD70581.1| hypothetical protein A193_02548 [Escherichia coli KTE234]
gi|431069945|gb|ELD78265.1| hypothetical protein A195_01644 [Escherichia coli KTE235]
gi|431074978|gb|ELD82515.1| hypothetical protein A197_01960 [Escherichia coli KTE236]
gi|431080689|gb|ELD87484.1| hypothetical protein A199_02330 [Escherichia coli KTE237]
gi|431085122|gb|ELD91245.1| hypothetical protein A1S3_02216 [Escherichia coli KTE47]
gi|431091996|gb|ELD97704.1| hypothetical protein A1S7_02591 [Escherichia coli KTE49]
gi|431100708|gb|ELE05678.1| hypothetical protein A1SE_02437 [Escherichia coli KTE53]
gi|431108604|gb|ELE12576.1| hypothetical protein A1SI_02587 [Escherichia coli KTE55]
gi|431116324|gb|ELE19772.1| hypothetical protein A1SM_03225 [Escherichia coli KTE57]
gi|431120454|gb|ELE23452.1| hypothetical protein A1SO_02471 [Escherichia coli KTE58]
gi|431128057|gb|ELE30349.1| hypothetical protein A1SS_02497 [Escherichia coli KTE60]
gi|431130709|gb|ELE32792.1| hypothetical protein A1SW_02555 [Escherichia coli KTE62]
gi|431138784|gb|ELE40596.1| hypothetical protein A1U7_02684 [Escherichia coli KTE67]
gi|431140963|gb|ELE42728.1| hypothetical protein A1U5_02224 [Escherichia coli KTE66]
gi|431149022|gb|ELE50295.1| hypothetical protein A1UG_01951 [Escherichia coli KTE72]
gi|431155070|gb|ELE55831.1| hypothetical protein A1UM_02263 [Escherichia coli KTE75]
gi|431159765|gb|ELE60309.1| hypothetical protein A1UO_01937 [Escherichia coli KTE76]
gi|431171071|gb|ELE71252.1| hypothetical protein A1UW_01976 [Escherichia coli KTE80]
gi|431180399|gb|ELE80286.1| hypothetical protein A1W5_02107 [Escherichia coli KTE86]
gi|431183513|gb|ELE83329.1| hypothetical protein A1W1_02109 [Escherichia coli KTE83]
gi|431191168|gb|ELE90553.1| hypothetical protein A1W7_02300 [Escherichia coli KTE87]
gi|431191998|gb|ELE91372.1| hypothetical protein A1WE_02051 [Escherichia coli KTE93]
gi|431201608|gb|ELF00305.1| hypothetical protein A1Y3_02832 [Escherichia coli KTE116]
gi|431211020|gb|ELF09003.1| hypothetical protein A1Y7_02482 [Escherichia coli KTE119]
gi|431221375|gb|ELF18696.1| hypothetical protein A1YW_02189 [Escherichia coli KTE143]
gi|431234808|gb|ELF30202.1| hypothetical protein A31I_02081 [Escherichia coli KTE162]
gi|431244465|gb|ELF38773.1| hypothetical protein A31M_01958 [Escherichia coli KTE169]
gi|431249563|gb|ELF43718.1| hypothetical protein WCG_04100 [Escherichia coli KTE6]
gi|431257375|gb|ELF50299.1| hypothetical protein WCI_01937 [Escherichia coli KTE8]
gi|431262797|gb|ELF54786.1| hypothetical protein WCK_02598 [Escherichia coli KTE9]
gi|431265835|gb|ELF57397.1| hypothetical protein WE1_02310 [Escherichia coli KTE17]
gi|431273557|gb|ELF64631.1| hypothetical protein WE3_02312 [Escherichia coli KTE18]
gi|431275738|gb|ELF66765.1| hypothetical protein WGK_02393 [Escherichia coli KTE45]
gi|431283250|gb|ELF74109.1| hypothetical protein WEE_02240 [Escherichia coli KTE23]
gi|431291977|gb|ELF82473.1| hypothetical protein WGG_01941 [Escherichia coli KTE43]
gi|431297251|gb|ELF86909.1| hypothetical protein WEQ_01751 [Escherichia coli KTE29]
gi|431302804|gb|ELF91983.1| hypothetical protein WEA_01578 [Escherichia coli KTE22]
gi|431308808|gb|ELF97087.1| hypothetical protein A1S1_01752 [Escherichia coli KTE46]
gi|431310981|gb|ELF99161.1| hypothetical protein A1S5_02778 [Escherichia coli KTE48]
gi|431316031|gb|ELG03930.1| hypothetical protein A1S9_03629 [Escherichia coli KTE50]
gi|431318668|gb|ELG06363.1| hypothetical protein A1SG_03038 [Escherichia coli KTE54]
gi|431326886|gb|ELG14231.1| hypothetical protein A1SQ_02396 [Escherichia coli KTE59]
gi|431329610|gb|ELG16896.1| hypothetical protein A1SY_02581 [Escherichia coli KTE63]
gi|431337396|gb|ELG24484.1| hypothetical protein A1U3_01789 [Escherichia coli KTE65]
gi|431339815|gb|ELG26869.1| hypothetical protein A1US_02284 [Escherichia coli KTE78]
gi|431343895|gb|ELG30851.1| hypothetical protein A1UU_03767 [Escherichia coli KTE79]
gi|431348994|gb|ELG35836.1| hypothetical protein A1W3_02272 [Escherichia coli KTE84]
gi|431362294|gb|ELG48872.1| hypothetical protein A1WM_00679 [Escherichia coli KTE101]
gi|431364619|gb|ELG51150.1| hypothetical protein A1Y1_01964 [Escherichia coli KTE115]
gi|431367963|gb|ELG54431.1| hypothetical protein A1Y5_02710 [Escherichia coli KTE118]
gi|431372509|gb|ELG58171.1| hypothetical protein A1YA_03975 [Escherichia coli KTE123]
gi|431375814|gb|ELG61137.1| hypothetical protein A1YM_03630 [Escherichia coli KTE135]
gi|431385217|gb|ELG69204.1| hypothetical protein A1YO_02210 [Escherichia coli KTE136]
gi|431389641|gb|ELG73352.1| hypothetical protein A1YQ_02447 [Escherichia coli KTE140]
gi|431395065|gb|ELG78578.1| hypothetical protein A1YS_02377 [Escherichia coli KTE141]
gi|431400173|gb|ELG83555.1| hypothetical protein A1YY_01675 [Escherichia coli KTE144]
gi|431410983|gb|ELG94126.1| hypothetical protein A313_00671 [Escherichia coli KTE147]
gi|431416851|gb|ELG99322.1| hypothetical protein A31C_02610 [Escherichia coli KTE158]
gi|431422593|gb|ELH04785.1| hypothetical protein A31K_03643 [Escherichia coli KTE165]
gi|431426491|gb|ELH08535.1| hypothetical protein A13U_02287 [Escherichia coli KTE192]
gi|431433328|gb|ELH15000.1| hypothetical protein A13Y_02300 [Escherichia coli KTE194]
gi|431440336|gb|ELH21665.1| hypothetical protein A13Q_02327 [Escherichia coli KTE190]
gi|431444599|gb|ELH25621.1| hypothetical protein A133_02328 [Escherichia coli KTE173]
gi|431445319|gb|ELH26246.1| hypothetical protein A135_02677 [Escherichia coli KTE175]
gi|431464128|gb|ELH44250.1| hypothetical protein A13C_00840 [Escherichia coli KTE183]
gi|431471105|gb|ELH50998.1| hypothetical protein A15G_03087 [Escherichia coli KTE203]
gi|431474841|gb|ELH54647.1| hypothetical protein A15E_02593 [Escherichia coli KTE202]
gi|431480637|gb|ELH60356.1| hypothetical protein A15S_04380 [Escherichia coli KTE209]
gi|431482720|gb|ELH62422.1| hypothetical protein A15O_02590 [Escherichia coli KTE207]
gi|431492024|gb|ELH71627.1| hypothetical protein A15W_02393 [Escherichia coli KTE211]
gi|431494951|gb|ELH74537.1| hypothetical protein A179_02643 [Escherichia coli KTE217]
gi|431500985|gb|ELH79971.1| hypothetical protein A175_01997 [Escherichia coli KTE215]
gi|431507237|gb|ELH85523.1| hypothetical protein A17A_02607 [Escherichia coli KTE218]
gi|431510117|gb|ELH88364.1| hypothetical protein A17K_02434 [Escherichia coli KTE223]
gi|431515217|gb|ELH93044.1| hypothetical protein A17S_02879 [Escherichia coli KTE227]
gi|431524343|gb|ELI01290.1| hypothetical protein A17W_00510 [Escherichia coli KTE229]
gi|431531986|gb|ELI08641.1| hypothetical protein WI5_01825 [Escherichia coli KTE104]
gi|431532888|gb|ELI09392.1| hypothetical protein WI7_01870 [Escherichia coli KTE105]
gi|431537280|gb|ELI13428.1| hypothetical protein WI9_01795 [Escherichia coli KTE106]
gi|431543463|gb|ELI18444.1| hypothetical protein WIA_01886 [Escherichia coli KTE109]
gi|431552244|gb|ELI26206.1| hypothetical protein WIE_02128 [Escherichia coli KTE113]
gi|431553594|gb|ELI27520.1| hypothetical protein WIC_02177 [Escherichia coli KTE112]
gi|431570891|gb|ELI43799.1| hypothetical protein WIM_02017 [Escherichia coli KTE124]
gi|431571767|gb|ELI44637.1| hypothetical protein WIK_02179 [Escherichia coli KTE122]
gi|431583093|gb|ELI55103.1| hypothetical protein WIO_02079 [Escherichia coli KTE125]
gi|431585840|gb|ELI57787.1| hypothetical protein WIQ_02030 [Escherichia coli KTE128]
gi|431589094|gb|ELI60313.1| hypothetical protein WIS_01928 [Escherichia coli KTE129]
gi|431597613|gb|ELI67519.1| hypothetical protein WIU_01813 [Escherichia coli KTE131]
gi|431603055|gb|ELI72482.1| hypothetical protein WIW_01870 [Escherichia coli KTE133]
gi|431607115|gb|ELI76486.1| hypothetical protein WIY_01843 [Escherichia coli KTE137]
gi|431616945|gb|ELI85968.1| hypothetical protein WK3_01886 [Escherichia coli KTE139]
gi|431620449|gb|ELI89326.1| hypothetical protein WK5_01874 [Escherichia coli KTE145]
gi|431628384|gb|ELI96760.1| hypothetical protein WK9_01943 [Escherichia coli KTE150]
gi|431629272|gb|ELI97638.1| hypothetical protein WK7_01915 [Escherichia coli KTE148]
gi|431635239|gb|ELJ03454.1| hypothetical protein WKA_01902 [Escherichia coli KTE153]
gi|431643497|gb|ELJ11189.1| hypothetical protein WKC_01825 [Escherichia coli KTE157]
gi|431646735|gb|ELJ14227.1| hypothetical protein WKE_01846 [Escherichia coli KTE160]
gi|431661791|gb|ELJ28603.1| hypothetical protein WKM_01694 [Escherichia coli KTE167]
gi|431662939|gb|ELJ29707.1| hypothetical protein WKO_01926 [Escherichia coli KTE168]
gi|431672025|gb|ELJ38298.1| hypothetical protein WKQ_02012 [Escherichia coli KTE174]
gi|431675387|gb|ELJ41532.1| hypothetical protein WKS_01858 [Escherichia coli KTE176]
gi|431678931|gb|ELJ44849.1| hypothetical protein WKU_01971 [Escherichia coli KTE177]
gi|431688727|gb|ELJ54245.1| hypothetical protein WKW_01845 [Escherichia coli KTE179]
gi|431689085|gb|ELJ54602.1| hypothetical protein WKY_01999 [Escherichia coli KTE180]
gi|431693619|gb|ELJ59031.1| hypothetical protein WGQ_01990 [Escherichia coli KTE232]
gi|431704874|gb|ELJ69499.1| hypothetical protein WGM_02151 [Escherichia coli KTE82]
gi|431706637|gb|ELJ71207.1| hypothetical protein WGS_01665 [Escherichia coli KTE88]
gi|431707894|gb|ELJ72423.1| hypothetical protein WGO_01860 [Escherichia coli KTE85]
gi|431722510|gb|ELJ86476.1| hypothetical protein WGY_02023 [Escherichia coli KTE95]
gi|431723091|gb|ELJ87053.1| hypothetical protein WGW_01969 [Escherichia coli KTE94]
gi|431730440|gb|ELJ94004.1| hypothetical protein WI1_01785 [Escherichia coli KTE97]
gi|431734946|gb|ELJ98322.1| hypothetical protein WI3_01843 [Escherichia coli KTE99]
gi|432348269|gb|ELL42720.1| hypothetical protein B185_006557 [Escherichia coli J96]
gi|441653204|emb|CCQ01667.1| FIG000859: hypothetical protein YebC [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|441714790|emb|CCQ05355.1| FIG000859: hypothetical protein YebC [Escherichia coli Nissle
1917]
gi|444540024|gb|ELV19731.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0814]
gi|444542828|gb|ELV22164.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 09BKT078844]
gi|444548710|gb|ELV27074.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0815]
gi|444559780|gb|ELV36981.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0839]
gi|444561817|gb|ELV38920.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0816]
gi|444565917|gb|ELV42760.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0848]
gi|444575358|gb|ELV51600.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1753]
gi|444579501|gb|ELV55487.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1775]
gi|444581743|gb|ELV57581.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1793]
gi|444595341|gb|ELV70445.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA11]
gi|444595521|gb|ELV70623.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli ATCC 700728]
gi|444598248|gb|ELV73184.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1805]
gi|444609168|gb|ELV83627.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA19]
gi|444609538|gb|ELV83996.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA13]
gi|444617440|gb|ELV91556.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA2]
gi|444626349|gb|ELW00145.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA47]
gi|444626730|gb|ELW00522.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA48]
gi|444631910|gb|ELW05493.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA8]
gi|444641201|gb|ELW14440.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 7.1982]
gi|444644136|gb|ELW17260.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1781]
gi|444647409|gb|ELW20383.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.1762]
gi|444656021|gb|ELW28557.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli PA35]
gi|444662836|gb|ELW35088.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 3.4880]
gi|444667645|gb|ELW39679.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 95.0083]
gi|444671031|gb|ELW42870.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 99.0670]
gi|449318752|gb|EMD08814.1| hypothetical protein C202_09046 [Escherichia coli O08]
Length = 246
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + ID ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|417629040|ref|ZP_12279280.1| hypothetical protein ECSTECMHI813_1956 [Escherichia coli
STEC_MHI813]
gi|345374254|gb|EGX06207.1| hypothetical protein ECSTECMHI813_1956 [Escherichia coli
STEC_MHI813]
Length = 246
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + ID ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|374814417|ref|ZP_09718154.1| hypothetical protein TpriZ_11164 [Treponema primitia ZAS-1]
Length = 246
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT L K++ +A + GGG+ P+ N RL + I + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQIFTKLIKEISIAARMGGGS-PDANPRLRTAILKARGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ AIK Y EL + P
Sbjct: 61 MPKDNIDRAIKKGTGELEGVNYEELIYEAYAP 92
>gi|190571591|ref|YP_001975949.1| hypothetical protein WPa_1214 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018996|ref|ZP_03334803.1| hypothetical protein C1A_768 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|226696279|sp|B3CNE0.1|Y1214_WOLPP RecName: Full=Probable transcriptional regulatory protein WP1214
gi|190357863|emb|CAQ55322.1| hypothetical protein WP1214 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995105|gb|EEB55746.1| hypothetical protein C1A_768 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 246
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS++ NI+H K A+D +++ FT L +++ +A K+ G TDP N RL S I +K +
Sbjct: 2 AGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQ-GLTDPELNPRLRSAIFSARKEN 60
Query: 88 MPMTTIENAIKSCNVPENIYG--YLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
+P IE AIK N N+ G Y E+ P+ G+A +V A++ R R
Sbjct: 61 LPKDKIETAIK--NAAGNVAGESYEEIQYEGCGPS----------GAALIVHALTNNRNR 108
Query: 144 FPPSANFISNRLG 156
+I +R G
Sbjct: 109 TASEIRYIFSRKG 121
>gi|373458763|ref|ZP_09550530.1| UPF0082 protein yeeN [Caldithrix abyssi DSM 13497]
gi|371720427|gb|EHO42198.1| UPF0082 protein yeeN [Caldithrix abyssi DSM 13497]
Length = 251
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H KA D ++ +FT + K++ +A + GGG DP N RL I K ++
Sbjct: 2 SGHSKWHSIKHKKARVDAQRGRIFTKIIKEITVAARLGGG-DPEANPRLRVAIAQAKAAN 60
Query: 88 MPMTTIENAIK 98
MP I+NAI+
Sbjct: 61 MPAKNIDNAIR 71
>gi|119952831|ref|YP_945040.1| hypothetical protein BT0025 [Borrelia turicatae 91E135]
gi|254799456|sp|A1QYH8.1|Y025_BORT9 RecName: Full=Probable transcriptional regulatory protein BT0025
gi|119861602|gb|AAX17370.1| hypothetical cytosolic protein [Borrelia turicatae 91E135]
Length = 244
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT L +++ +A K GGG D +N RL ++ + S+
Sbjct: 2 SGHSKWSTIKRKKGALDAKRNKIFTKLIREISIAAKMGGG-DIESNSRLRLAVNKARVSN 60
Query: 88 MPMTTIENAIKSCNVPENI-YGYLELSCLPWKP 119
MP IE AIK + +NI Y EL+ + P
Sbjct: 61 MPKDNIEKAIKKGSGDDNIGSEYFELTYEAYAP 93
>gi|94986293|ref|YP_605657.1| hypothetical protein Dgeo_2194 [Deinococcus geothermalis DSM 11300]
gi|118574115|sp|Q1IW96.1|Y2194_DEIGD RecName: Full=Probable transcriptional regulatory protein Dgeo_2194
gi|94556574|gb|ABF46488.1| protein of unknown function DUF28 [Deinococcus geothermalis DSM
11300]
Length = 244
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ K A D++++ +++ + ++ AV+ GG DP N L + I K +
Sbjct: 2 AGHSKWAQIKRKKGANDKKRSAIYSKHIRAIQAAVRSGGSGDPAANLALKNAIAAAKADT 61
Query: 88 MPMTTIENAIK-SCNVPENIYGYLELSCLPWKP 119
+P IENAIK + E Y E++ + P
Sbjct: 62 VPADNIENAIKRAVGAAEGAADYKEVTYEGYGP 94
>gi|15639465|ref|NP_218915.1| hypothetical protein TP0474 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025705|ref|YP_001933477.1| hypothetical protein TPASS_0474 [Treponema pallidum subsp. pallidum
SS14]
gi|338706436|ref|YP_004673204.1| hypothetical protein TPCCA_0474 [Treponema paraluiscuniculi
Cuniculi A]
gi|378972981|ref|YP_005221585.1| hypothetical protein TPESAMD_0474 [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|378974048|ref|YP_005222654.1| hypothetical protein TPEGAU_0474 [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|378975109|ref|YP_005223717.1| hypothetical protein TPADAL_0474 [Treponema pallidum subsp.
pallidum DAL-1]
gi|378981957|ref|YP_005230262.1| hypothetical protein TPECDC2_0474 [Treponema pallidum subsp.
pertenue str. CDC2]
gi|384421991|ref|YP_005631350.1| hypothetical protein TPChic_0474 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|408502348|ref|YP_006869792.1| hypothetical protein TPAMA_0474 [Treponema pallidum subsp. pallidum
str. Mexico A]
gi|6226380|sp|O83487.1|Y474_TREPA RecName: Full=Probable transcriptional regulatory protein TP_0474
gi|226706230|sp|B2S369.1|Y474_TREPS RecName: Full=Probable transcriptional regulatory protein
TPASS_0474
gi|3322762|gb|AAC65461.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018280|gb|ACD70898.1| hypothetical protein TPASS_0474 [Treponema pallidum subsp. pallidum
SS14]
gi|291059857|gb|ADD72592.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Chicago]
gi|335344497|gb|AEH40413.1| conserved hypothetical protein [Treponema paraluiscuniculi Cuniculi
A]
gi|374677304|gb|AEZ57597.1| hypothetical protein TPESAMD_0474 [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|374678374|gb|AEZ58666.1| hypothetical protein TPECDC2_0474 [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374679443|gb|AEZ59734.1| hypothetical protein TPEGAU_0474 [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|374680507|gb|AEZ60797.1| hypothetical protein TPADAL_0474 [Treponema pallidum subsp.
pallidum DAL-1]
gi|408475711|gb|AFU66476.1| hypothetical protein TPAMA_0474 [Treponema pallidum subsp. pallidum
str. Mexico A]
Length = 245
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT K++ +A + GG DP N RL + I + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKFIKEISVAARMAGG-DPQANPRLRTAILKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK + Y EL + P G A LV ++ + +
Sbjct: 61 MPKDNIERAIKKGTGELSGSSYEELVYEGYAPG----------GVAVLVEVLTDNKNRAA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|345865428|ref|ZP_08817612.1| UPF0082 protein [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345123434|gb|EGW53330.1| UPF0082 protein [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 248
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA D+++ ++T L +++ +A + GGG D N RL +D ++
Sbjct: 2 AGHSKWANIKHKKAANDKKRGKIWTKLIREITVAARMGGG-DIGANPRLRLAVDKGLGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP TI+ A+K Y EL + P G+A +V M+ R
Sbjct: 61 MPKDTIDRAVKRGAGAGEGENYDELRYEGYGPG----------GAAVIVDCMTDNR 106
>gi|320537069|ref|ZP_08037047.1| conserved hypothetical protein TIGR01033 [Treponema phagedenis
F0421]
gi|320146072|gb|EFW37710.1| conserved hypothetical protein TIGR01033 [Treponema phagedenis
F0421]
Length = 247
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT K++ +A + GGG DP N RL + I + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQMFTKFIKEISIAARMGGG-DPAANPRLRTAILKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK Y EL + P G A LV ++ + +
Sbjct: 61 MPKDNIERAIKKGTGELGGSNYEELIYEGYAPG----------GVAILVEVLTDNKNRAA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|261868505|ref|YP_003256427.1| hypothetical protein D11S_1850 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|365966262|ref|YP_004947824.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|416075942|ref|ZP_11585210.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|416089733|ref|ZP_11587975.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|444344625|ref|ZP_21152846.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|444348898|ref|ZP_21156449.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|261413837|gb|ACX83208.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348005485|gb|EGY45963.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|348009328|gb|EGY49488.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|365745175|gb|AEW76080.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|443543759|gb|ELT53901.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|443545971|gb|ELT55694.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D ++N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|392531870|ref|ZP_10279007.1| hypothetical protein CmalA3_14227 [Carnobacterium maltaromaticum
ATCC 35586]
Length = 241
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F +S+++ +AVK GG DP+TN +L ID K ++
Sbjct: 2 SGHSKWSNIQGRKNAQDAKRGQIFQKISREIYMAVK-SGGPDPSTNPQLRMMIDKAKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV 127
MP ++ AI + Y E++ + P IA LV
Sbjct: 61 MPNDNVKRAIAKGSQSGEGENYEEITYEGYGPN-GIAVLV 99
>gi|407003785|gb|EKE20312.1| hypothetical protein ACD_8C00022G0018 [uncultured bacterium]
Length = 238
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHS W I+ K D ++A +FT + + +A KEGGG DP N++L ID + +
Sbjct: 2 SGHSHWAGIKQRKGVNDAKRAGVFTKYGRLITIAAKEGGG-DPEMNFKLKMAIDRARYEN 60
Query: 88 MPMTTIENAIK 98
MP TIE A+K
Sbjct: 61 MPKDTIERAVK 71
>gi|283785602|ref|YP_003365467.1| hypothetical protein ROD_19051 [Citrobacter rodentium ICC168]
gi|282949056|emb|CBG88659.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
Length = 247
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + ID ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAIDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|419914081|ref|ZP_14432487.1| hypothetical protein ECKD1_13008, partial [Escherichia coli KD1]
gi|388387542|gb|EIL49157.1| hypothetical protein ECKD1_13008, partial [Escherichia coli KD1]
Length = 178
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + ID ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|416103194|ref|ZP_11589187.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346812|ref|ZP_21154773.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|348007929|gb|EGY48208.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|443541242|gb|ELT51696.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D ++N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|296135362|ref|YP_003642604.1| hypothetical protein Tint_0880 [Thiomonas intermedia K12]
gi|410693044|ref|YP_003623665.1| conserved hypothetical protein, yebC [Thiomonas sp. 3As]
gi|294339468|emb|CAZ87827.1| conserved hypothetical protein, yebC [Thiomonas sp. 3As]
gi|295795484|gb|ADG30274.1| protein of unknown function DUF28 [Thiomonas intermedia K12]
Length = 240
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T + +++ A + GGG DPN N RL +D K ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGKVWTKIIREISAAARLGGG-DPNANPRLRLAVDKAKAAN 60
Query: 88 MPMTTIENAI-KSCNVPENIYGYLEL 112
MP T++ I K+ E ++ Y E+
Sbjct: 61 MPADTVKKNIDKATGALEGVH-YEEI 85
>gi|159045302|ref|YP_001534096.1| hypothetical protein Dshi_2762 [Dinoroseobacter shibae DFL 12]
gi|189039764|sp|A8LJ00.1|Y2762_DINSH RecName: Full=Probable transcriptional regulatory protein
Dshi_2762
gi|157913062|gb|ABV94495.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ +A LF+ LSK++ +A K G DP+ N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDKLRAKLFSKLSKEITVAAKM-GDPDPDKNPRLRLAVKEAKSQS 60
Query: 88 MPMTTIENAIK 98
+P IE AIK
Sbjct: 61 VPKDVIERAIK 71
>gi|387130674|ref|YP_006293564.1| YebC/PmpR family DNA-binding regulatory protein [Methylophaga sp.
JAM7]
gi|386271963|gb|AFJ02877.1| DNA-binding regulatory protein, YebC/PmpR family [Methylophaga
sp. JAM7]
Length = 249
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ +A + GG+DP +N RL + ID S+
Sbjct: 2 AGHSKWANIQHRKGAQDAKRGKLFTRLIREITVAARM-GGSDPASNPRLRAAIDKALGSN 60
Query: 88 MPMTTIENAIK 98
M IE A K
Sbjct: 61 MTKDVIERASK 71
>gi|378823765|ref|ZP_09846357.1| DNA-binding regulatory protein, YebC/PmpR family [Sutterella
parvirubra YIT 11816]
gi|378597418|gb|EHY30714.1| DNA-binding regulatory protein, YebC/PmpR family [Sutterella
parvirubra YIT 11816]
Length = 247
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +++ L+T L +++ +A + GGG DP+TN RL + + +
Sbjct: 2 AGHSKWANIQHRKGRQDAKRSNLWTKLVREIIVAARMGGG-DPDTNSRLRLALVKARGGN 60
Query: 88 MPMTTIENAI 97
+P TI+NAI
Sbjct: 61 VPKDTIQNAI 70
>gi|260432977|ref|ZP_05786948.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416805|gb|EEX10064.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 231
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ LSK++ +A K G DP N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKLSKEITVAAK-MGDPDPEKNPRLRLAVKEAKSQS 60
Query: 88 MPMTTIENAIKSC 100
MP IE AIK
Sbjct: 61 MPKDNIERAIKKA 73
>gi|84686295|ref|ZP_01014190.1| hypothetical protein 1099457000256_RB2654_08827 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665822|gb|EAQ12297.1| hypothetical protein RB2654_08827 [Rhodobacterales bacterium
HTCC2654]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ L+K++ +A K G DP+ N RL + K +S
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKLAKEITVAAK-MGDPDPDKNPRLRLAVKEAKSNS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
+P I+ AIK E Y E+ + P G A +V AM+ R
Sbjct: 61 VPKDVIDRAIKKSQAGEG-DDYEEIRYEGYGPN----------GVAVIVEAMTDNR 105
>gi|372266979|ref|ZP_09503027.1| hypothetical protein AlS89_03732 [Alteromonas sp. S89]
Length = 247
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT + ++L +A K GG +P+ N L +TID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKVFTKIIRELTVAAKSGG--NPDDNPALRATIDKALGAN 59
Query: 88 MPMTTIENAI 97
M TI+ AI
Sbjct: 60 MKRDTIDKAI 69
>gi|333997570|ref|YP_004530182.1| hypothetical protein TREPR_2938 [Treponema primitia ZAS-2]
gi|333739511|gb|AEF85001.1| conserved hypothetical protein [Treponema primitia ZAS-2]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT L K++ +A + GGG+ P+ N RL + I + ++
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQIFTKLIKEISIAARMGGGS-PDANPRLRTAILKARGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ AIK Y EL + P
Sbjct: 61 MPKDNIDRAIKKGTGELEGVNYEELIYEAYAP 92
>gi|257095107|ref|YP_003168748.1| hypothetical protein CAP2UW1_3562 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047631|gb|ACV36819.1| protein of unknown function DUF28 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 241
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D++++ F+ ++K++ ++ K GGG D N RL +D K +
Sbjct: 2 AGHSKWANIQHRKGRQDEKRSASFSKIAKEITVSAKMGGG-DAAFNPRLRLAVDKAKGVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP I+NAIK Y+E+
Sbjct: 61 MPKDKIDNAIKKGTGELEGVDYVEI 85
>gi|291612981|ref|YP_003523138.1| hypothetical protein Slit_0511 [Sideroxydans lithotrophicus ES-1]
gi|291583093|gb|ADE10751.1| protein of unknown function DUF28 [Sideroxydans lithotrophicus
ES-1]
Length = 243
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ +A K GG+DP+ N RL ++ +
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGQIFTRLIKEITVASKL-GGSDPDINPRLRLAMEKAYDQN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK Y+EL + + G+A +V M+
Sbjct: 61 MPKDNVERAIKRGAGELEGVDYMELRYEGY----------GINGAAVMVDCMT 103
>gi|387120412|ref|YP_006286295.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415763621|ref|ZP_11482170.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416031456|ref|ZP_11572526.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416066874|ref|ZP_11582121.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|444334505|ref|ZP_21150033.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|348001601|gb|EGY42336.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348002402|gb|EGY43091.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348654513|gb|EGY70126.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385874904|gb|AFI86463.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|443550289|gb|ELT58670.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVGSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|451981357|ref|ZP_21929716.1| conserved hypothetical protein UPF0082, DUF28 [Nitrospina gracilis
3/211]
gi|451761422|emb|CCQ90974.1| conserved hypothetical protein UPF0082, DUF28 [Nitrospina gracilis
3/211]
Length = 251
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ +FT L K++ +A + GGG D N N RL + I K+ +
Sbjct: 2 SGHSKWSTIKHKKGAADAKRGKIFTKLIKEITVAARLGGG-DANANPRLRTAIAAAKEQN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I AIK Y E++ + P
Sbjct: 61 MPQDNINRAIKKGTGELEGASYEEITYEGYGP 92
>gi|85709537|ref|ZP_01040602.1| glucose-1-phosphate adenylyl transferase [Erythrobacter sp. NAP1]
gi|85688247|gb|EAQ28251.1| glucose-1-phosphate adenylyl transferase [Erythrobacter sp. NAP1]
Length = 248
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI H K A+D++++ LF+ LS+++ +A K G DP+ N RL I+ K S
Sbjct: 2 AGHSKFKNIMHRKGAQDKKRSNLFSKLSREITVAAKM-GAPDPDMNPRLRLAINTAKGQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP I+ AI + + Y E+ + P GSA +V A++ R
Sbjct: 61 MPKDNIQRAIDKASAADG-ENYEEVRYEGYGPG----------GSAIIVEALTDNR 105
>gi|146295998|ref|YP_001179769.1| hypothetical protein [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166227541|sp|A4XI43.1|Y964_CALS8 RecName: Full=Probable transcriptional regulatory protein Csac_0964
gi|145409574|gb|ABP66578.1| protein of unknown function DUF28 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 242
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NIRH K D +K +F+ L ++L + V + G DP TN +L I K ++
Sbjct: 2 SGHSKWANIRHKKEKTDAQKGKIFSKLGREL-MVVAKMYGPDPETNPKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MPM I IK + GY +++ + P G A +V AM+ R
Sbjct: 61 MPMDKIMGFIKRAAGEIDTTGYEDITYEGYGPG----------GVAVIVEAMTNNR 106
>gi|225389173|ref|ZP_03758897.1| hypothetical protein CLOSTASPAR_02919 [Clostridium asparagiforme
DSM 15981]
gi|225044763|gb|EEG55009.1| hypothetical protein CLOSTASPAR_02919 [Clostridium asparagiforme
DSM 15981]
Length = 242
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKEGG DP N +L I K ++
Sbjct: 2 SGHSKFANIKHKKERNDAAKGKIFTVIGREIAVAVKEGGA-DPANNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ IK N Y L+ + P+ G A +V ++ + +
Sbjct: 61 MPNDTIDRGIKKAAGDANAVNYEVLTYEGYGPS----------GVAIIVDTLTDNKNRTA 110
Query: 148 ANFIS 152
AN S
Sbjct: 111 ANVRS 115
>gi|167855801|ref|ZP_02478554.1| hypothetical protein HPS_03174 [Haemophilus parasuis 29755]
gi|167853080|gb|EDS24341.1| hypothetical protein HPS_03174 [Haemophilus parasuis 29755]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D ++N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DTSSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI
Sbjct: 61 MTRDTINRAID 71
>gi|219871143|ref|YP_002475518.1| hypothetical protein HAPS_0943 [Haemophilus parasuis SH0165]
gi|254807278|sp|B8F5G8.1|Y943_HAEPS RecName: Full=Probable transcriptional regulatory protein
HAPS_0943
gi|219691347|gb|ACL32570.1| aspartyl-tRNA synthetase [Haemophilus parasuis SH0165]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D ++N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DTSSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI
Sbjct: 61 MTRDTINRAID 71
>gi|393236484|gb|EJD44032.1| YebC-like protein [Auricularia delicata TFB-10046 SS5]
Length = 263
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 26 RYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGT-DPNTNYRLASTIDYCK 84
R +GHSKW I+H K A D+ ++ ++ ++++ AV+ GGG+ DP N LA+ + K
Sbjct: 16 RASGHSKWSKIKHTKGAADKARSVVYVKYIREIESAVRLGGGSVDPEINSSLANALKRSK 75
Query: 85 KSSMPMTTIENAIK 98
+ +P IENA+K
Sbjct: 76 AAGLPKDNIENALK 89
>gi|429735141|ref|ZP_19269118.1| DNA-binding regulatory protein, YebC/PmpR family [Aggregatibacter
actinomycetemcomitans Y4]
gi|429150081|gb|EKX93031.1| DNA-binding regulatory protein, YebC/PmpR family [Aggregatibacter
actinomycetemcomitans Y4]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVGSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|373107923|ref|ZP_09522215.1| YebC/PmpR family DNA-binding regulatory protein [Stomatobaculum
longum]
gi|371650508|gb|EHO15968.1| YebC/PmpR family DNA-binding regulatory protein [Stomatobaculum
longum]
Length = 243
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGPDPANNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
+P TI N IK S N +N+Y GY
Sbjct: 61 VPNDTINNGIKKAAGGLDSVNYEQNVYEGY 90
>gi|257888643|ref|ZP_05668296.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257897402|ref|ZP_05677055.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257899962|ref|ZP_05679615.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|293378839|ref|ZP_06624994.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium PC4.1]
gi|293571067|ref|ZP_06682108.1| conserved hypothetical protein [Enterococcus faecium E980]
gi|430842698|ref|ZP_19460610.1| hypothetical protein OGO_02393 [Enterococcus faecium E1007]
gi|431043713|ref|ZP_19493003.1| hypothetical protein OIE_05693 [Enterococcus faecium E1590]
gi|431084332|ref|ZP_19496002.1| hypothetical protein OIG_05431 [Enterococcus faecium E1604]
gi|431115422|ref|ZP_19497839.1| hypothetical protein OII_04541 [Enterococcus faecium E1613]
gi|431600924|ref|ZP_19522409.1| hypothetical protein OK5_05278 [Enterococcus faecium E1861]
gi|431739277|ref|ZP_19528214.1| hypothetical protein OK9_05434 [Enterococcus faecium E1972]
gi|431742259|ref|ZP_19531154.1| hypothetical protein OKA_05579 [Enterococcus faecium E2039]
gi|431758721|ref|ZP_19547346.1| hypothetical protein OKO_02522 [Enterococcus faecium E3083]
gi|431763485|ref|ZP_19552035.1| hypothetical protein OKS_04625 [Enterococcus faecium E3548]
gi|257824697|gb|EEV51629.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257833967|gb|EEV60388.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257837874|gb|EEV62948.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|291608850|gb|EFF38131.1| conserved hypothetical protein [Enterococcus faecium E980]
gi|292642380|gb|EFF60535.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium PC4.1]
gi|430492922|gb|ELA69263.1| hypothetical protein OGO_02393 [Enterococcus faecium E1007]
gi|430561301|gb|ELB00571.1| hypothetical protein OIE_05693 [Enterococcus faecium E1590]
gi|430564876|gb|ELB04053.1| hypothetical protein OIG_05431 [Enterococcus faecium E1604]
gi|430568581|gb|ELB07621.1| hypothetical protein OII_04541 [Enterococcus faecium E1613]
gi|430590081|gb|ELB28166.1| hypothetical protein OK5_05278 [Enterococcus faecium E1861]
gi|430596107|gb|ELB33958.1| hypothetical protein OK9_05434 [Enterococcus faecium E1972]
gi|430600415|gb|ELB38064.1| hypothetical protein OKA_05579 [Enterococcus faecium E2039]
gi|430617089|gb|ELB53975.1| hypothetical protein OKO_02522 [Enterococcus faecium E3083]
gi|430622258|gb|ELB58995.1| hypothetical protein OKS_04625 [Enterococcus faecium E3548]
Length = 240
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-AGGPDPSMNPALRLVVDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP +E AIK + Y E++ + P
Sbjct: 61 MPNDNVERAIKKATSAVDETNYDEITYEGYGP 92
>gi|336396014|ref|ZP_08577413.1| hypothetical protein LfarK3_09880 [Lactobacillus farciminis KCTC
3681]
Length = 244
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K+A+D ++ +F LS++L +A K GG+DPN N L +D + ++
Sbjct: 2 SGHSKWHNIQGRKSAQDAKRGKIFQKLSRELFMAAK-AGGSDPNDNAALRLIVDKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP I+ A+ + + + Y E++ + P G A LV A++
Sbjct: 61 MPKDNIKRALDKADGGSDDH-YDEVTYEGYAPG----------GVAVLVEALT 102
>gi|254467141|ref|ZP_05080552.1| conserved hypothetical protein TIGR01033 [Rhodobacterales bacterium
Y4I]
gi|206688049|gb|EDZ48531.1| conserved hypothetical protein TIGR01033 [Rhodobacterales bacterium
Y4I]
Length = 268
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ L+K++ +A K G DP+ N RL + K S
Sbjct: 24 AGHSKWANIQHRKGRQDAARSKLFSKLAKEITVAAKM-GDPDPDKNPRLRLAVKEAKSQS 82
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
+P IE AIK + + Y E+ + P G A +V AM+ + +
Sbjct: 83 VPKDVIERAIKKA-IGGDAENYDEIRYEGYGPA----------GVAVIVEAMTDNKNRTA 131
Query: 148 ANFIS 152
+N S
Sbjct: 132 SNVRS 136
>gi|171913244|ref|ZP_02928714.1| hypothetical protein VspiD_18730 [Verrucomicrobium spinosum DSM
4136]
Length = 250
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++HIKA D ++ +F+ SK+L LA K GG++P N RL + I + +
Sbjct: 2 AGHNKWSKVKHIKAVVDAKRGKVFSKFSKELTLAAKL-GGSNPELNARLRTAILNARAMN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPGDNIERAIK 71
>gi|357052976|ref|ZP_09114080.1| hypothetical protein HMPREF9467_01052 [Clostridium clostridioforme
2_1_49FAA]
gi|355386401|gb|EHG33441.1| hypothetical protein HMPREF9467_01052 [Clostridium clostridioforme
2_1_49FAA]
Length = 242
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N +L I K ++
Sbjct: 2 SGHSKFANIKHKKERNDAAKGKIFTVIGREIAVAVKE-GGADPANNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ IK N Y L+ + P G A +V ++ + +
Sbjct: 61 MPNDTIDRGIKKAAGDANSVDYETLTYEGYGPN----------GVAIIVDTLTDNKNRTA 110
Query: 148 ANFIS 152
AN S
Sbjct: 111 ANVRS 115
>gi|405980967|ref|ZP_11039296.1| YebC/PmpR family DNA-binding regulatory protein [Actinomyces
neuii BVS029A5]
gi|404392986|gb|EJZ88043.1| YebC/PmpR family DNA-binding regulatory protein [Actinomyces
neuii BVS029A5]
Length = 254
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GGG DPN N L I KK+S
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARTGGG-DPNGNPTLYDAIQKAKKNS 60
Query: 88 MPMTTIENAIK 98
+P I+ A+K
Sbjct: 61 VPADNIDRAVK 71
>gi|379726935|ref|YP_005319120.1| hypothetical protein MPD5_0346 [Melissococcus plutonius DAT561]
gi|376317838|dbj|BAL61625.1| hypothetical protein MPD5_0346 [Melissococcus plutonius DAT561]
Length = 240
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP N L +D K ++
Sbjct: 2 SGHSKWNNIQGRKNAQDAKRGKIFQKLSREIYMAAKT-GGIDPAMNPSLRLAVDKGKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ AIK + + Y E++ + P G+A LV A++ R +
Sbjct: 61 MPNDNIDRAIKKASSSTDGENYDEVTYEGYGPG----------GTAILVYALTDNRNRTA 110
Query: 148 AN 149
N
Sbjct: 111 TN 112
>gi|229817632|ref|ZP_04447914.1| hypothetical protein BIFANG_02902 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785421|gb|EEP21535.1| hypothetical protein BIFANG_02902 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 251
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A ++GGG DP+ N L I KK+S
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARQGGG-DPDGNPSLYDAIYKAKKAS 60
Query: 88 MPMTTIENAIK 98
MP I+ A+K
Sbjct: 61 MPADNIKRAVK 71
>gi|29654857|ref|NP_820549.1| hypothetical protein CBU_1566 [Coxiella burnetii RSA 493]
gi|153208307|ref|ZP_01946686.1| conserved hypothetical protein TIGR01033 [Coxiella burnetii 'MSU
Goat Q177']
gi|154706307|ref|YP_001423842.1| hypothetical protein CBUD_0422 [Coxiella burnetii Dugway 5J108-111]
gi|161830968|ref|YP_001597403.1| hypothetical protein COXBURSA331_A1752 [Coxiella burnetii RSA 331]
gi|212212082|ref|YP_002303018.1| hypothetical protein CbuG_0446 [Coxiella burnetii CbuG_Q212]
gi|212219278|ref|YP_002306065.1| hypothetical protein CbuK_1793 [Coxiella burnetii CbuK_Q154]
gi|33516993|sp|Q83BE4.1|Y1566_COXBU RecName: Full=Probable transcriptional regulatory protein CBU_1566
gi|189038999|sp|A9N9A0.1|Y1752_COXBR RecName: Full=Probable transcriptional regulatory protein
COXBURSA331_A1752
gi|189040287|sp|A9KF43.1|Y422_COXBN RecName: Full=Probable transcriptional regulatory protein CBUD_0422
gi|226695969|sp|B6J503.1|Y1793_COXB1 RecName: Full=Probable transcriptional regulatory protein CbuK_1793
gi|226706190|sp|B6IYU5.1|Y446_COXB2 RecName: Full=Probable transcriptional regulatory protein CbuG_0446
gi|29542126|gb|AAO91063.1| hypothetical cytosolic protein [Coxiella burnetii RSA 493]
gi|120576091|gb|EAX32715.1| conserved hypothetical protein TIGR01033 [Coxiella burnetii 'MSU
Goat Q177']
gi|154355593|gb|ABS77055.1| hypothetical cytosolic protein [Coxiella burnetii Dugway 5J108-111]
gi|161762835|gb|ABX78477.1| conserved hypothetical protein TIGR01033 [Coxiella burnetii RSA
331]
gi|212010492|gb|ACJ17873.1| hypothetical cytosolic protein [Coxiella burnetii CbuG_Q212]
gi|212013540|gb|ACJ20920.1| hypothetical cytosolic protein [Coxiella burnetii CbuK_Q154]
Length = 244
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 28/176 (15%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L +++ +A + GG D ++N RL + +D ++
Sbjct: 2 AGHSKWANIKHAKARQDAKRGKVFTKLIREITVAARL-GGEDIDSNPRLRAVVDKAFAAN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL------- 126
MP TI AIK N+ E Y GY + + CL ++A +
Sbjct: 61 MPKDTITRAIKRGAGSGAGDNLVEVRYEGYGPSGVAVMVDCLTDNKNRTVAEVRHAFSKC 120
Query: 127 ---VSLEGS-ACLVSAMSRVRFPPSANFISNRLGLFLEC-SEPITRMKQASVLLAT 177
+ EGS A L + FPP+++ + + LE +E +T S+ + T
Sbjct: 121 DGNLGTEGSVAYLFKQRGLITFPPNSDE-EKIMEIALEVGAEDVTTNDDGSIDVTT 175
>gi|416061424|ref|ZP_11581166.1| LOW QUALITY PROTEIN: dATP pyrophosphohydrolase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347997749|gb|EGY38720.1| LOW QUALITY PROTEIN: dATP pyrophosphohydrolase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 138
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVGSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|332687177|ref|YP_004456951.1| hypothetical protein MPTP_1717 [Melissococcus plutonius ATCC 35311]
gi|332371186|dbj|BAK22142.1| hypothetical protein MPTP_1717 [Melissococcus plutonius ATCC 35311]
Length = 240
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP N L +D K ++
Sbjct: 2 SGHSKWNNIQGRKNAQDAKRGKIFQKLSREIYMAAKT-GGIDPAMNPSLRLAVDKGKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ AIK + + Y E++ + P G+A LV A++ R +
Sbjct: 61 MPNDNIDRAIKKASSSTDGENYDEVTYEGYGPG----------GTAILVYALTDNRNRTA 110
Query: 148 AN 149
N
Sbjct: 111 TN 112
>gi|194433920|ref|ZP_03066192.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|194417792|gb|EDX33889.1| conserved hypothetical protein [Shigella dysenteriae 1012]
Length = 262
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 18 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 76
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 77 MTRDTLNRAI 86
>gi|417372763|ref|ZP_12142973.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|353604386|gb|EHC59185.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
Length = 265
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 21 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 79
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 80 MTRDTLNRAI 89
>gi|213621162|ref|ZP_03373945.1| hypothetical protein SentesTyp_28112 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 202
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|430854023|ref|ZP_19471745.1| hypothetical protein OGW_05363 [Enterococcus faecium E1258]
gi|430539700|gb|ELA79940.1| hypothetical protein OGW_05363 [Enterococcus faecium E1258]
Length = 240
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-AGGPDPSMNPALRLVVDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP +E AIK + Y E++ + P G LV A++ R +
Sbjct: 61 MPNDNVERAIKKATSAVDETNYDEITYEGYGPG----------GVGILVHALTENRNRTA 110
Query: 148 AN 149
N
Sbjct: 111 TN 112
>gi|395230679|ref|ZP_10408980.1| yebC [Citrobacter sp. A1]
gi|421847677|ref|ZP_16280811.1| hypothetical protein D186_21581 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424733042|ref|ZP_18161612.1| integrase [Citrobacter sp. L17]
gi|394715622|gb|EJF21430.1| yebC [Citrobacter sp. A1]
gi|411770955|gb|EKS54683.1| hypothetical protein D186_21581 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422892590|gb|EKU32445.1| integrase [Citrobacter sp. L17]
gi|455645922|gb|EMF24965.1| hypothetical protein H262_04045 [Citrobacter freundii GTC 09479]
Length = 247
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|337279762|ref|YP_004619234.1| hypothetical protein Rta_21200 [Ramlibacter tataouinensis TTB310]
gi|334730839|gb|AEG93215.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 241
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T + +++ +A ++GGG D N N RL +D K ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGKIWTRVIREIMVAARQGGG-DLNANPRLRLAVDKAKAAN 60
Query: 88 MPMTTIENAIKSC 100
MP TI+ I
Sbjct: 61 MPADTIKRNIDKA 73
>gi|160939247|ref|ZP_02086598.1| hypothetical protein CLOBOL_04141 [Clostridium bolteae ATCC
BAA-613]
gi|158438210|gb|EDP15970.1| hypothetical protein CLOBOL_04141 [Clostridium bolteae ATCC
BAA-613]
Length = 242
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKEGG DP N +L I K ++
Sbjct: 2 SGHSKFANIKHKKERNDAAKGKIFTVIGREIAVAVKEGGA-DPANNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ IK N Y L+ + P G A +V ++ + +
Sbjct: 61 MPNDTIDRGIKKAAGDANSVNYETLTYEGYGPN----------GVAIIVDTLTDNKNRTA 110
Query: 148 ANFIS 152
AN S
Sbjct: 111 ANVRS 115
>gi|328956971|ref|YP_004374357.1| hypothetical protein CAR_c06470 [Carnobacterium sp. 17-4]
gi|328673295|gb|AEB29341.1| hypothetical protein CAR_c06470 [Carnobacterium sp. 17-4]
Length = 241
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F +S+++ +AVK GG DPN N L +D K ++
Sbjct: 2 SGHSKWSNIQGRKNAQDAKRGKIFQKISREIYMAVK-SGGPDPNLNPSLRMVMDKAKSNN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP +E AIK + Y E+ + P +G+A LV ++
Sbjct: 61 MPNDNVERAIKKGSTTGENENYDEVIYEGYGP----------KGTAVLVHTLT 103
>gi|261337768|ref|ZP_05965652.1| protein YebC [Bifidobacterium gallicum DSM 20093]
gi|270277221|gb|EFA23075.1| protein YebC [Bifidobacterium gallicum DSM 20093]
Length = 251
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A ++GGG DP+ N L I KK+S
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARQGGG-DPDGNPSLYDAIYKAKKAS 60
Query: 88 MPMTTIENAIK 98
MP I+ A+K
Sbjct: 61 MPADNIKRAVK 71
>gi|206900756|ref|YP_002251322.1| hypothetical protein DICTH_1505 [Dictyoglomus thermophilum
H-6-12]
gi|226734671|sp|B5YFL4.1|Y1505_DICT6 RecName: Full=Probable transcriptional regulatory protein
DICTH_1505
gi|206739859|gb|ACI18917.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12]
Length = 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KAA D +K LF+ LSK++ +A K GGG +P TN RL + I+ K+++
Sbjct: 2 SGHSKWANIKHRKAAADAKKGKLFSQLSKEIIIAAKHGGG-NPETNPRLRAAIERAKEAN 60
Query: 88 MPMTTIENAI 97
MP IE AI
Sbjct: 61 MPKENIEKAI 70
>gi|320352801|ref|YP_004194140.1| hypothetical protein Despr_0673 [Desulfobulbus propionicus DSM
2032]
gi|320121303|gb|ADW16849.1| protein of unknown function DUF28 [Desulfobulbus propionicus DSM
2032]
Length = 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT L K++ +A K GGG DP N RL S I K +
Sbjct: 2 SGHSKWSTIKRKKGANDAKRGKIFTKLIKEITIAAKMGGG-DPEGNPRLRSAITVAKSEN 60
Query: 88 MPMTTIENAIK 98
MP I+ AIK
Sbjct: 61 MPKENIDRAIK 71
>gi|449327929|gb|AGE94230.1| hypothetical protein [Citrobacter amalonaticus Y19]
Length = 247
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|418721584|ref|ZP_13280760.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
borgpetersenii str. UI 09149]
gi|410741937|gb|EKQ90688.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
borgpetersenii str. UI 09149]
Length = 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIKK--------GTGELEGVVYEECL--YECFGPAGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|157145357|ref|YP_001452676.1| hypothetical protein CKO_01097 [Citrobacter koseri ATCC BAA-895]
gi|166228559|sp|A8AFH7.1|Y1097_CITK8 RecName: Full=Probable transcriptional regulatory protein
CKO_01097
gi|157082562|gb|ABV12240.1| hypothetical protein CKO_01097 [Citrobacter koseri ATCC BAA-895]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|213580154|ref|ZP_03361980.1| hypothetical protein SentesTyph_02645 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 75
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|407010522|gb|EKE25393.1| hypothetical protein ACD_5C00179G0006 [uncultured bacterium]
Length = 238
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+ K A+D ++A++FT + + +A KEGG + +TN++L +D + +
Sbjct: 2 SGHNKWSGIKDRKGAQDSKRASIFTKYGRLITIAAKEGGSS-MDTNFKLKMVVDQARSFN 60
Query: 88 MPMTTIENAIK 98
MP TIE AIK
Sbjct: 61 MPKETIERAIK 71
>gi|425055284|ref|ZP_18458765.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 505]
gi|403034226|gb|EJY45690.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 505]
Length = 251
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D K ++
Sbjct: 13 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-AGGPDPSMNPALRLVVDKAKAAN 71
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP +E AIK + Y E++ + P
Sbjct: 72 MPNDNVERAIKKATSAVDETNYDEITYEGYGP 103
>gi|19112366|ref|NP_595574.1| mitochondrial translational activator of cytochrome C oxidase I
(predicted) [Schizosaccharomyces pombe 972h-]
gi|74626722|sp|O43075.2|YGWC_SCHPO RecName: Full=Probable transcriptional regulatory protein
C8D2.12c
gi|6682314|emb|CAA17827.2| mitochondrial translational activator of cytochrome C oxidase I
(predicted) [Schizosaccharomyces pombe]
Length = 293
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K+A DQ ++ LS+ + LAV++ G +P N RLA+ ++ KK S
Sbjct: 30 SGHNKWSKIKHKKSANDQARSLQIGKLSQGIILAVRQEGA-NPELNMRLATLLESAKKIS 88
Query: 88 MPMTTIENAI 97
MP + IENAI
Sbjct: 89 MPKSGIENAI 98
>gi|421094068|ref|ZP_15554789.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
borgpetersenii str. 200801926]
gi|410363209|gb|EKP14241.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
borgpetersenii str. 200801926]
gi|456886713|gb|EMF97839.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
borgpetersenii str. 200701203]
Length = 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIKK--------GTGELEGVVYEECL--YECFGPAGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|283832738|ref|ZP_06352479.1| protein YebC [Citrobacter youngae ATCC 29220]
gi|291072421|gb|EFE10530.1| protein YebC [Citrobacter youngae ATCC 29220]
Length = 247
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|319762839|ref|YP_004126776.1| hypothetical protein Alide_2149 [Alicycliphilus denitrificans BC]
gi|330824918|ref|YP_004388221.1| hypothetical protein Alide2_2338 [Alicycliphilus denitrificans
K601]
gi|317117400|gb|ADU99888.1| protein of unknown function DUF28 [Alicycliphilus denitrificans BC]
gi|329310290|gb|AEB84705.1| UPF0082 protein yeeN [Alicycliphilus denitrificans K601]
Length = 239
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 15/119 (12%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T + +++ +A ++GGG DP N RL ID K ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARQGGG-DPAANPRLRLAIDKAKAAN 60
Query: 88 MPMTTIE-NAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
MP I+ N K+ E I Y E+ + + G+A +V M+ RVR
Sbjct: 61 MPADRIKYNIDKASGTLEGI-NYEEIRYEGY----------GIGGAAIIVDTMTDNRVR 108
>gi|237731901|ref|ZP_04562382.1| yebC [Citrobacter sp. 30_2]
gi|365107578|ref|ZP_09335905.1| UPF0082 protein yebC [Citrobacter freundii 4_7_47CFAA]
gi|420366896|ref|ZP_14867720.1| hypothetical protein SF123566_8138 [Shigella flexneri 1235-66]
gi|226907440|gb|EEH93358.1| yebC [Citrobacter sp. 30_2]
gi|363641277|gb|EHL80677.1| UPF0082 protein yebC [Citrobacter freundii 4_7_47CFAA]
gi|391323780|gb|EIQ80404.1| hypothetical protein SF123566_8138 [Shigella flexneri 1235-66]
Length = 247
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|153812754|ref|ZP_01965422.1| hypothetical protein RUMOBE_03161 [Ruminococcus obeum ATCC 29174]
gi|149831114|gb|EDM86203.1| DNA-binding regulatory protein, YebC/PmpR family [Ruminococcus
obeum ATCC 29174]
Length = 247
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D +K +FT + +++ +AVK GG DPN N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAKKGKVFTVIGREIVMAVK-AGGADPNNNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSC 100
MP TIE IK
Sbjct: 61 MPNDTIERGIKKA 73
>gi|110805808|ref|YP_689328.1| hypothetical protein SFV_1866 [Shigella flexneri 5 str. 8401]
gi|110615356|gb|ABF04023.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|82776450|ref|YP_402799.1| hypothetical protein SDY_1151 [Shigella dysenteriae Sd197]
gi|309789260|ref|ZP_07683853.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|119392018|sp|Q32H97.1|YEBC_SHIDS RecName: Full=Probable transcriptional regulatory protein YebC
gi|81240598|gb|ABB61308.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308923014|gb|EFP68528.1| conserved hypothetical protein [Shigella dysenteriae 1617]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|253578409|ref|ZP_04855681.1| hypothetical protein RSAG_00642 [Ruminococcus sp. 5_1_39B_FAA]
gi|251850727|gb|EES78685.1| hypothetical protein RSAG_00642 [Ruminococcus sp. 5_1_39BFAA]
Length = 243
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D +K +FT + ++L +AVK GG DPN N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAKKGKIFTVIGRELVMAVK-AGGPDPNNNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSC 100
MP TIE IK
Sbjct: 61 MPNDTIERGIKKA 73
>gi|168187962|ref|ZP_02622597.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169294195|gb|EDS76328.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D K +FT + ++L LA ++ GG++P+TN +L I K ++
Sbjct: 2 SGHSKWHNIQAKKGKNDAAKGKVFTKIGRELILAARD-GGSNPDTNSKLRDVIAKAKAAN 60
Query: 88 MPMTTIENAIK 98
MP TI+ AIK
Sbjct: 61 MPNDTIDRAIK 71
>gi|116329114|ref|YP_798834.1| hypothetical protein LBL_2537 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|122283104|sp|Q04YE4.1|Y2537_LEPBL RecName: Full=Probable transcriptional regulatory protein LBL_2537
gi|116121858|gb|ABJ79901.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIKK--------GTGELEGVVYEECL--YECFGPAGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|419923563|ref|ZP_14441500.1| hypothetical protein EC54115_11217 [Escherichia coli 541-15]
gi|388393356|gb|EIL54738.1| hypothetical protein EC54115_11217 [Escherichia coli 541-15]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|431771733|ref|ZP_19560110.1| hypothetical protein OM3_05540 [Enterococcus faecium E1644]
gi|431774664|ref|ZP_19562969.1| hypothetical protein OM5_02429 [Enterococcus faecium E2369]
gi|430632723|gb|ELB68924.1| hypothetical protein OM3_05540 [Enterococcus faecium E1644]
gi|430633549|gb|ELB69704.1| hypothetical protein OM5_02429 [Enterococcus faecium E2369]
Length = 240
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-AGGPDPSMNPALRLVVDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP +E AIK + Y E++ + P
Sbjct: 61 MPNDNVERAIKKATSAVDETNYDEITYEGYGP 92
>gi|302385988|ref|YP_003821810.1| hypothetical protein Closa_1590 [Clostridium saccharolyticum WM1]
gi|302196616|gb|ADL04187.1| protein of unknown function DUF28 [Clostridium saccharolyticum WM1]
Length = 242
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + ++L +AVKE GG DP N RL I K ++
Sbjct: 2 SGHSKFANIKHKKERNDAAKGKIFTVIGRELAVAVKE-GGPDPANNSRLRDIIAKAKANN 60
Query: 88 MPMTTIENAIKSC 100
MP TIE IK
Sbjct: 61 MPNDTIERGIKKA 73
>gi|16129817|ref|NP_416378.1| conserved protein, UPF0082 family [Escherichia coli str. K-12
substr. MG1655]
gi|30063274|ref|NP_837445.1| hypothetical protein S1940 [Shigella flexneri 2a str. 2457T]
gi|74311806|ref|YP_310225.1| hypothetical protein SSON_1277 [Shigella sonnei Ss046]
gi|170019791|ref|YP_001724745.1| hypothetical protein EcolC_1768 [Escherichia coli ATCC 8739]
gi|170081520|ref|YP_001730840.1| hypothetical protein ECDH10B_2005 [Escherichia coli str. K-12
substr. DH10B]
gi|191168081|ref|ZP_03029880.1| conserved hypothetical protein [Escherichia coli B7A]
gi|193066058|ref|ZP_03047115.1| conserved hypothetical protein [Escherichia coli E22]
gi|194429661|ref|ZP_03062179.1| conserved hypothetical protein [Escherichia coli B171]
gi|194439052|ref|ZP_03071135.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|209919231|ref|YP_002293315.1| hypothetical protein ECSE_2040 [Escherichia coli SE11]
gi|238901079|ref|YP_002926875.1| hypothetical protein BWG_1678 [Escherichia coli BW2952]
gi|260844207|ref|YP_003221985.1| hypothetical protein ECO103_2054 [Escherichia coli O103:H2 str.
12009]
gi|293446251|ref|ZP_06662673.1| hypothetical protein ECCG_00399 [Escherichia coli B088]
gi|300816244|ref|ZP_07096466.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
107-1]
gi|300904748|ref|ZP_07122578.1| hypothetical protein HMPREF9536_02819 [Escherichia coli MS 84-1]
gi|300917559|ref|ZP_07134214.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
115-1]
gi|300951486|ref|ZP_07165321.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
116-1]
gi|300956623|ref|ZP_07168902.1| hypothetical protein HMPREF9547_02440 [Escherichia coli MS 175-1]
gi|301029314|ref|ZP_07192411.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
196-1]
gi|301304453|ref|ZP_07210565.1| hypothetical protein HMPREF9347_03058 [Escherichia coli MS 124-1]
gi|301645620|ref|ZP_07245549.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
146-1]
gi|309794245|ref|ZP_07688669.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
145-7]
gi|312969905|ref|ZP_07784088.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331642478|ref|ZP_08343613.1| protein YebC [Escherichia coli H736]
gi|331653273|ref|ZP_08354278.1| protein YebC [Escherichia coli M718]
gi|332278966|ref|ZP_08391379.1| conserved hypothetical protein [Shigella sp. D9]
gi|383177926|ref|YP_005455931.1| hypothetical protein SSON53_06875 [Shigella sonnei 53G]
gi|384543493|ref|YP_005727556.1| hypothetical protein SFxv_2098 [Shigella flexneri 2002017]
gi|386280926|ref|ZP_10058590.1| UPF0082 protein yebC [Escherichia sp. 4_1_40B]
gi|386595324|ref|YP_006091724.1| hypothetical protein [Escherichia coli DH1]
gi|386614421|ref|YP_006134087.1| hypothetical protein UMNK88_2336 [Escherichia coli UMNK88]
gi|386704410|ref|YP_006168257.1| hypothetical protein P12B_c1221 [Escherichia coli P12b]
gi|387621584|ref|YP_006129211.1| hypothetical protein ECDH1ME8569_1810 [Escherichia coli DH1]
gi|388477938|ref|YP_490126.1| hypothetical protein Y75_p1840 [Escherichia coli str. K-12
substr. W3110]
gi|414575551|ref|ZP_11432752.1| hypothetical protein SS323385_1393 [Shigella sonnei 3233-85]
gi|415775303|ref|ZP_11487219.1| conserved hypothetical protein [Escherichia coli 3431]
gi|415805137|ref|ZP_11501346.1| hypothetical protein ECE128010_5109 [Escherichia coli E128010]
gi|415809639|ref|ZP_11502368.1| hypothetical protein ECLT68_0636 [Escherichia coli LT-68]
gi|415850893|ref|ZP_11527688.1| hypothetical protein SS53G_4475 [Shigella sonnei 53G]
gi|415854082|ref|ZP_11529940.1| hypothetical protein SF2457T_0885 [Shigella flexneri 2a str.
2457T]
gi|415861201|ref|ZP_11534867.1| glucose-1-phosphate adenylyl transferase [Escherichia coli MS
85-1]
gi|415873657|ref|ZP_11540877.1| glucose-1-phosphate adenylyl transferase [Escherichia coli MS
79-10]
gi|417121579|ref|ZP_11971007.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 97.0246]
gi|417149903|ref|ZP_11989821.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 1.2264]
gi|417167957|ref|ZP_12000579.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 99.0741]
gi|417172918|ref|ZP_12002951.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 3.2608]
gi|417187576|ref|ZP_12012242.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 93.0624]
gi|417231894|ref|ZP_12033292.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 5.0959]
gi|417252245|ref|ZP_12044008.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 4.0967]
gi|417261712|ref|ZP_12049200.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 2.3916]
gi|417271453|ref|ZP_12058802.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 2.4168]
gi|417276960|ref|ZP_12064286.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 3.2303]
gi|417291615|ref|ZP_12078896.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli B41]
gi|417608453|ref|ZP_12258959.1| hypothetical protein ECSTECDG1313_2845 [Escherichia coli
STEC_DG131-3]
gi|417613286|ref|ZP_12263747.1| hypothetical protein ECSTECEH250_2339 [Escherichia coli
STEC_EH250]
gi|417618426|ref|ZP_12268846.1| hypothetical protein ECG581_2230 [Escherichia coli G58-1]
gi|417623658|ref|ZP_12273962.1| hypothetical protein ECSTECH18_2407 [Escherichia coli STEC_H.1.8]
gi|417634781|ref|ZP_12284995.1| hypothetical protein ECSTECS1191_2694 [Escherichia coli
STEC_S1191]
gi|417639400|ref|ZP_12289550.1| hypothetical protein ECTX1999_2103 [Escherichia coli TX1999]
gi|417701853|ref|ZP_12350977.1| hypothetical protein SFK218_2088 [Shigella flexneri K-218]
gi|417707693|ref|ZP_12356736.1| hypothetical protein SFVA6_2500 [Shigella flexneri VA-6]
gi|417712749|ref|ZP_12361729.1| hypothetical protein SFK272_2476 [Shigella flexneri K-272]
gi|417717425|ref|ZP_12366341.1| hypothetical protein SFK227_2150 [Shigella flexneri K-227]
gi|417722747|ref|ZP_12371568.1| hypothetical protein SFK304_1840 [Shigella flexneri K-304]
gi|417728588|ref|ZP_12377301.1| hypothetical protein SFK671_2250 [Shigella flexneri K-671]
gi|417733685|ref|ZP_12382341.1| hypothetical protein SF274771_2229 [Shigella flexneri 2747-71]
gi|417738731|ref|ZP_12387317.1| hypothetical protein SF434370_2063 [Shigella flexneri 4343-70]
gi|417743533|ref|ZP_12392068.1| hypothetical protein SF293071_2157 [Shigella flexneri 2930-71]
gi|417828115|ref|ZP_12474676.1| hypothetical protein SFJ1713_2116 [Shigella flexneri J1713]
gi|417943539|ref|ZP_12586787.1| hypothetical protein IAE_01010 [Escherichia coli XH140A]
gi|417974963|ref|ZP_12615764.1| hypothetical protein IAM_01465 [Escherichia coli XH001]
gi|418044058|ref|ZP_12682207.1| hypothetical protein ECW26_44380 [Escherichia coli W26]
gi|418256257|ref|ZP_12880340.1| hypothetical protein SF660363_2156 [Shigella flexneri 6603-63]
gi|418264308|ref|ZP_12884832.1| hypothetical protein SSMOSELEY_1643 [Shigella sonnei str.
Moseley]
gi|418303134|ref|ZP_12914928.1| hypothetical protein UMNF18_2321 [Escherichia coli UMNF18]
gi|418957767|ref|ZP_13509690.1| hypothetical protein OQE_19300 [Escherichia coli J53]
gi|419142622|ref|ZP_13687369.1| hypothetical protein ECDEC6A_2265 [Escherichia coli DEC6A]
gi|419148552|ref|ZP_13693217.1| hypothetical protein ECDEC6B_2599 [Escherichia coli DEC6B]
gi|419154058|ref|ZP_13698626.1| hypothetical protein ECDEC6C_2214 [Escherichia coli DEC6C]
gi|419170424|ref|ZP_13714314.1| hypothetical protein ECDEC7A_2076 [Escherichia coli DEC7A]
gi|419175173|ref|ZP_13719018.1| hypothetical protein ECDEC7B_2075 [Escherichia coli DEC7B]
gi|419181073|ref|ZP_13724690.1| hypothetical protein ECDEC7C_2201 [Escherichia coli DEC7C]
gi|419186510|ref|ZP_13730027.1| hypothetical protein ECDEC7D_2242 [Escherichia coli DEC7D]
gi|419191795|ref|ZP_13735255.1| hypothetical protein ECDEC7E_2072 [Escherichia coli DEC7E]
gi|419289760|ref|ZP_13831855.1| hypothetical protein ECDEC11A_2111 [Escherichia coli DEC11A]
gi|419295092|ref|ZP_13837138.1| hypothetical protein ECDEC11B_2161 [Escherichia coli DEC11B]
gi|419300411|ref|ZP_13842412.1| hypothetical protein ECDEC11C_2284 [Escherichia coli DEC11C]
gi|419306508|ref|ZP_13848412.1| hypothetical protein ECDEC11D_2072 [Escherichia coli DEC11D]
gi|419311535|ref|ZP_13853402.1| hypothetical protein ECDEC11E_2066 [Escherichia coli DEC11E]
gi|419316947|ref|ZP_13858759.1| hypothetical protein ECDEC12A_2249 [Escherichia coli DEC12A]
gi|419323100|ref|ZP_13864804.1| hypothetical protein ECDEC12B_2590 [Escherichia coli DEC12B]
gi|419329037|ref|ZP_13870651.1| hypothetical protein ECDEC12C_2240 [Escherichia coli DEC12C]
gi|419334654|ref|ZP_13876193.1| hypothetical protein ECDEC12D_2412 [Escherichia coli DEC12D]
gi|419340125|ref|ZP_13881600.1| hypothetical protein ECDEC12E_2254 [Escherichia coli DEC12E]
gi|419808960|ref|ZP_14333846.1| hypothetical protein UWO_00365 [Escherichia coli O32:H37 str. P4]
gi|419865474|ref|ZP_14387856.1| hypothetical protein ECO9340_15279 [Escherichia coli O103:H25
str. CVM9340]
gi|419869502|ref|ZP_14391706.1| hypothetical protein ECO9450_18481 [Escherichia coli O103:H2 str.
CVM9450]
gi|419930568|ref|ZP_14448166.1| hypothetical protein EC5411_19815 [Escherichia coli 541-1]
gi|419941961|ref|ZP_14458612.1| hypothetical protein EC75_21554 [Escherichia coli 75]
gi|420320585|ref|ZP_14822421.1| hypothetical protein SF285071_2203 [Shigella flexneri 2850-71]
gi|420331419|ref|ZP_14833089.1| hypothetical protein SFK1770_2626 [Shigella flexneri K-1770]
gi|420341990|ref|ZP_14843482.1| hypothetical protein SFK404_2573 [Shigella flexneri K-404]
gi|420358073|ref|ZP_14859071.1| hypothetical protein SS322685_1877 [Shigella sonnei 3226-85]
gi|420362941|ref|ZP_14863845.1| hypothetical protein SS482266_1383 [Shigella sonnei 4822-66]
gi|420372688|ref|ZP_14872909.1| hypothetical protein SF123566_2906 [Shigella flexneri 1235-66]
gi|420385861|ref|ZP_14885219.1| hypothetical protein ECEPECA12_2222 [Escherichia coli EPECa12]
gi|420391548|ref|ZP_14890805.1| hypothetical protein ECEPECC34262_2377 [Escherichia coli EPEC
C342-62]
gi|421774224|ref|ZP_16210837.1| hypothetical protein ECAD30_03460 [Escherichia coli AD30]
gi|422354014|ref|ZP_16434761.1| hypothetical protein HMPREF9542_03343 [Escherichia coli MS 117-3]
gi|422772259|ref|ZP_16825947.1| hypothetical protein ERDG_02817 [Escherichia coli E482]
gi|422774235|ref|ZP_16827891.1| yebC [Escherichia coli H120]
gi|422790889|ref|ZP_16843593.1| hypothetical protein ERHG_01371 [Escherichia coli TA007]
gi|422816854|ref|ZP_16865068.1| UPF0082 protein yebC [Escherichia coli M919]
gi|423704669|ref|ZP_17679092.1| UPF0082 protein yebC [Escherichia coli H730]
gi|424838226|ref|ZP_18262863.1| hypothetical protein SF5M90T_1819 [Shigella flexneri 5a str.
M90T]
gi|425115248|ref|ZP_18517056.1| hypothetical protein EC80566_1904 [Escherichia coli 8.0566]
gi|425119967|ref|ZP_18521673.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 8.0569]
gi|425272978|ref|ZP_18664411.1| hypothetical protein ECTW15901_2204 [Escherichia coli TW15901]
gi|425283459|ref|ZP_18674519.1| hypothetical protein ECTW00353_2069 [Escherichia coli TW00353]
gi|425288742|ref|ZP_18679610.1| hypothetical protein EC3006_2219 [Escherichia coli 3006]
gi|425305414|ref|ZP_18695156.1| hypothetical protein ECN1_1839 [Escherichia coli N1]
gi|425422579|ref|ZP_18803759.1| hypothetical protein EC01288_1935 [Escherichia coli 0.1288]
gi|427804998|ref|ZP_18972065.1| hypothetical protein BN16_24071 [Escherichia coli chi7122]
gi|427809554|ref|ZP_18976619.1| hypothetical protein BN17_22821 [Escherichia coli]
gi|432369990|ref|ZP_19613079.1| hypothetical protein WCM_03937 [Escherichia coli KTE10]
gi|432417092|ref|ZP_19659703.1| hypothetical protein WGI_02597 [Escherichia coli KTE44]
gi|432481206|ref|ZP_19723164.1| hypothetical protein A15U_02321 [Escherichia coli KTE210]
gi|432531251|ref|ZP_19768280.1| hypothetical protein A191_04499 [Escherichia coli KTE233]
gi|432564063|ref|ZP_19800653.1| hypothetical protein A1SA_02702 [Escherichia coli KTE51]
gi|432580612|ref|ZP_19817038.1| hypothetical protein A1SK_04384 [Escherichia coli KTE56]
gi|432627450|ref|ZP_19863430.1| hypothetical protein A1UQ_02288 [Escherichia coli KTE77]
gi|432637092|ref|ZP_19872968.1| hypothetical protein A1UY_02447 [Escherichia coli KTE81]
gi|432661099|ref|ZP_19896745.1| hypothetical protein A1WY_02512 [Escherichia coli KTE111]
gi|432674903|ref|ZP_19910376.1| hypothetical protein A1YU_01447 [Escherichia coli KTE142]
gi|432685652|ref|ZP_19920954.1| hypothetical protein A31A_02502 [Escherichia coli KTE156]
gi|432691804|ref|ZP_19927035.1| hypothetical protein A31G_04022 [Escherichia coli KTE161]
gi|432704622|ref|ZP_19939726.1| hypothetical protein A31Q_02491 [Escherichia coli KTE171]
gi|432737354|ref|ZP_19972120.1| hypothetical protein WGE_02599 [Escherichia coli KTE42]
gi|432805930|ref|ZP_20039868.1| hypothetical protein A1WA_01833 [Escherichia coli KTE91]
gi|432861996|ref|ZP_20086756.1| hypothetical protein A311_02488 [Escherichia coli KTE146]
gi|432882104|ref|ZP_20098184.1| hypothetical protein A317_04470 [Escherichia coli KTE154]
gi|432934524|ref|ZP_20134033.1| hypothetical protein A13E_03185 [Escherichia coli KTE184]
gi|432947733|ref|ZP_20142889.1| hypothetical protein A153_02646 [Escherichia coli KTE196]
gi|432955298|ref|ZP_20147238.1| hypothetical protein A155_02515 [Escherichia coli KTE197]
gi|433043457|ref|ZP_20230957.1| hypothetical protein WIG_01982 [Escherichia coli KTE117]
gi|433048144|ref|ZP_20235513.1| hypothetical protein WII_02084 [Escherichia coli KTE120]
gi|433092289|ref|ZP_20278563.1| hypothetical protein WK1_01922 [Escherichia coli KTE138]
gi|433130407|ref|ZP_20315852.1| hypothetical protein WKG_02139 [Escherichia coli KTE163]
gi|433135095|ref|ZP_20320449.1| hypothetical protein WKI_02029 [Escherichia coli KTE166]
gi|433193850|ref|ZP_20377849.1| hypothetical protein WGU_02164 [Escherichia coli KTE90]
gi|442590230|ref|ZP_21009012.1| FIG000859: hypothetical protein YebC [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|443617944|ref|YP_007381800.1| hypothetical protein APECO78_13135 [Escherichia coli APEC O78]
gi|450189513|ref|ZP_21890576.1| hypothetical protein A364_09695 [Escherichia coli SEPT362]
gi|450244522|ref|ZP_21900373.1| hypothetical protein C201_08464 [Escherichia coli S17]
gi|67476510|sp|P0A8A0.1|YEBC_ECOLI RecName: Full=Probable transcriptional regulatory protein YebC
gi|67476511|sp|P0A8A1.1|YEBC_SHIFL RecName: Full=Probable transcriptional regulatory protein YebC
gi|119392019|sp|Q3Z2M2.1|YEBC_SHISS RecName: Full=Probable transcriptional regulatory protein YebC
gi|42173|emb|CAA42126.1| ORF246 [Escherichia coli K-12]
gi|216652|dbj|BAA01031.1| Orf26 [Escherichia coli]
gi|1736511|dbj|BAA15675.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|1788171|gb|AAC74934.1| conserved protein, UPF0082 family [Escherichia coli str. K-12
substr. MG1655]
gi|30041526|gb|AAP17254.1| hypothetical protein S1940 [Shigella flexneri 2a str. 2457T]
gi|73855283|gb|AAZ87990.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|169754719|gb|ACA77418.1| protein of unknown function DUF28 [Escherichia coli ATCC 8739]
gi|169889355|gb|ACB03062.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|190901879|gb|EDV61629.1| conserved hypothetical protein [Escherichia coli B7A]
gi|192926295|gb|EDV80932.1| conserved hypothetical protein [Escherichia coli E22]
gi|194412303|gb|EDX28607.1| conserved hypothetical protein [Escherichia coli B171]
gi|194422011|gb|EDX38015.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|195182926|dbj|BAG66494.1| hypothetical protein [Escherichia coli O111:H-]
gi|209912490|dbj|BAG77564.1| conserved hypothetical protein [Escherichia coli SE11]
gi|238860331|gb|ACR62329.1| conserved protein [Escherichia coli BW2952]
gi|257759354|dbj|BAI30851.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|260449013|gb|ACX39435.1| protein of unknown function DUF28 [Escherichia coli DH1]
gi|281601279|gb|ADA74263.1| hypothetical protein SFxv_2098 [Shigella flexneri 2002017]
gi|291323081|gb|EFE62509.1| hypothetical protein ECCG_00399 [Escherichia coli B088]
gi|299877740|gb|EFI85951.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
196-1]
gi|300316605|gb|EFJ66389.1| hypothetical protein HMPREF9547_02440 [Escherichia coli MS 175-1]
gi|300403332|gb|EFJ86870.1| hypothetical protein HMPREF9536_02819 [Escherichia coli MS 84-1]
gi|300415213|gb|EFJ98523.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
115-1]
gi|300449236|gb|EFK12856.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
116-1]
gi|300530934|gb|EFK51996.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
107-1]
gi|300840304|gb|EFK68064.1| hypothetical protein HMPREF9347_03058 [Escherichia coli MS 124-1]
gi|301076152|gb|EFK90958.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
146-1]
gi|308122150|gb|EFO59412.1| conserved hypothetical protein TIGR01033 [Escherichia coli MS
145-7]
gi|310338190|gb|EFQ03279.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|313650640|gb|EFS15042.1| hypothetical protein SF2457T_0885 [Shigella flexneri 2a str.
2457T]
gi|315136507|dbj|BAJ43666.1| hypothetical protein ECDH1ME8569_1810 [Escherichia coli DH1]
gi|315257304|gb|EFU37272.1| glucose-1-phosphate adenylyl transferase [Escherichia coli MS
85-1]
gi|315617913|gb|EFU98511.1| conserved hypothetical protein [Escherichia coli 3431]
gi|323158651|gb|EFZ44665.1| hypothetical protein ECE128010_5109 [Escherichia coli E128010]
gi|323165012|gb|EFZ50802.1| hypothetical protein SS53G_4475 [Shigella sonnei 53G]
gi|323174757|gb|EFZ60373.1| hypothetical protein ECLT68_0636 [Escherichia coli LT-68]
gi|323940468|gb|EGB36659.1| hypothetical protein ERDG_02817 [Escherichia coli E482]
gi|323948250|gb|EGB44238.1| yebC [Escherichia coli H120]
gi|323972628|gb|EGB67831.1| hypothetical protein ERHG_01371 [Escherichia coli TA007]
gi|324018007|gb|EGB87226.1| hypothetical protein HMPREF9542_03343 [Escherichia coli MS 117-3]
gi|331039276|gb|EGI11496.1| protein YebC [Escherichia coli H736]
gi|331049371|gb|EGI21443.1| protein YebC [Escherichia coli M718]
gi|332101318|gb|EGJ04664.1| conserved hypothetical protein [Shigella sp. D9]
gi|332343590|gb|AEE56924.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332756765|gb|EGJ87112.1| hypothetical protein SF434370_2063 [Shigella flexneri 4343-70]
gi|332757658|gb|EGJ87991.1| hypothetical protein SF274771_2229 [Shigella flexneri 2747-71]
gi|332758052|gb|EGJ88378.1| hypothetical protein SFK671_2250 [Shigella flexneri K-671]
gi|332766840|gb|EGJ97041.1| hypothetical protein SF293071_2157 [Shigella flexneri 2930-71]
gi|333003475|gb|EGK23018.1| hypothetical protein SFVA6_2500 [Shigella flexneri VA-6]
gi|333004717|gb|EGK24240.1| hypothetical protein SFK272_2476 [Shigella flexneri K-272]
gi|333004760|gb|EGK24282.1| hypothetical protein SFK218_2088 [Shigella flexneri K-218]
gi|333018438|gb|EGK37736.1| hypothetical protein SFK227_2150 [Shigella flexneri K-227]
gi|333018606|gb|EGK37900.1| hypothetical protein SFK304_1840 [Shigella flexneri K-304]
gi|335575439|gb|EGM61722.1| hypothetical protein SFJ1713_2116 [Shigella flexneri J1713]
gi|339415232|gb|AEJ56904.1| hypothetical protein UMNF18_2321 [Escherichia coli UMNF18]
gi|342364865|gb|EGU28964.1| hypothetical protein IAE_01010 [Escherichia coli XH140A]
gi|342930864|gb|EGU99586.1| glucose-1-phosphate adenylyl transferase [Escherichia coli MS
79-10]
gi|344195572|gb|EGV49641.1| hypothetical protein IAM_01465 [Escherichia coli XH001]
gi|345359043|gb|EGW91222.1| hypothetical protein ECSTECDG1313_2845 [Escherichia coli
STEC_DG131-3]
gi|345362797|gb|EGW94942.1| hypothetical protein ECSTECEH250_2339 [Escherichia coli
STEC_EH250]
gi|345376799|gb|EGX08732.1| hypothetical protein ECG581_2230 [Escherichia coli G58-1]
gi|345379176|gb|EGX11091.1| hypothetical protein ECSTECH18_2407 [Escherichia coli STEC_H.1.8]
gi|345388272|gb|EGX18083.1| hypothetical protein ECSTECS1191_2694 [Escherichia coli
STEC_S1191]
gi|345393798|gb|EGX23567.1| hypothetical protein ECTX1999_2103 [Escherichia coli TX1999]
gi|359332342|dbj|BAL38789.1| conserved protein [Escherichia coli str. K-12 substr. MDS42]
gi|377994802|gb|EHV57926.1| hypothetical protein ECDEC6B_2599 [Escherichia coli DEC6B]
gi|377996931|gb|EHV60039.1| hypothetical protein ECDEC6A_2265 [Escherichia coli DEC6A]
gi|377998425|gb|EHV61517.1| hypothetical protein ECDEC6C_2214 [Escherichia coli DEC6C]
gi|378016655|gb|EHV79535.1| hypothetical protein ECDEC7A_2076 [Escherichia coli DEC7A]
gi|378024441|gb|EHV87095.1| hypothetical protein ECDEC7C_2201 [Escherichia coli DEC7C]
gi|378030214|gb|EHV92818.1| hypothetical protein ECDEC7D_2242 [Escherichia coli DEC7D]
gi|378034704|gb|EHV97268.1| hypothetical protein ECDEC7B_2075 [Escherichia coli DEC7B]
gi|378039738|gb|EHW02226.1| hypothetical protein ECDEC7E_2072 [Escherichia coli DEC7E]
gi|378131691|gb|EHW93048.1| hypothetical protein ECDEC11A_2111 [Escherichia coli DEC11A]
gi|378142179|gb|EHX03381.1| hypothetical protein ECDEC11B_2161 [Escherichia coli DEC11B]
gi|378149943|gb|EHX11063.1| hypothetical protein ECDEC11D_2072 [Escherichia coli DEC11D]
gi|378151790|gb|EHX12897.1| hypothetical protein ECDEC11C_2284 [Escherichia coli DEC11C]
gi|378158636|gb|EHX19654.1| hypothetical protein ECDEC11E_2066 [Escherichia coli DEC11E]
gi|378167206|gb|EHX28121.1| hypothetical protein ECDEC12B_2590 [Escherichia coli DEC12B]
gi|378170932|gb|EHX31807.1| hypothetical protein ECDEC12A_2249 [Escherichia coli DEC12A]
gi|378172021|gb|EHX32881.1| hypothetical protein ECDEC12C_2240 [Escherichia coli DEC12C]
gi|378184016|gb|EHX44654.1| hypothetical protein ECDEC12D_2412 [Escherichia coli DEC12D]
gi|378190047|gb|EHX50633.1| hypothetical protein ECDEC12E_2254 [Escherichia coli DEC12E]
gi|383102578|gb|AFG40087.1| hypothetical protein P12B_c1221 [Escherichia coli P12b]
gi|383467278|gb|EID62299.1| hypothetical protein SF5M90T_1819 [Shigella flexneri 5a str.
M90T]
gi|383473009|gb|EID65039.1| hypothetical protein ECW26_44380 [Escherichia coli W26]
gi|384379376|gb|EIE37244.1| hypothetical protein OQE_19300 [Escherichia coli J53]
gi|385157890|gb|EIF19880.1| hypothetical protein UWO_00365 [Escherichia coli O32:H37 str. P4]
gi|385539525|gb|EIF86357.1| UPF0082 protein yebC [Escherichia coli M919]
gi|385705312|gb|EIG42377.1| UPF0082 protein yebC [Escherichia coli H730]
gi|386122109|gb|EIG70722.1| UPF0082 protein yebC [Escherichia sp. 4_1_40B]
gi|386148431|gb|EIG94868.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 97.0246]
gi|386160915|gb|EIH22720.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 1.2264]
gi|386170983|gb|EIH43031.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 99.0741]
gi|386180616|gb|EIH58090.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 3.2608]
gi|386181233|gb|EIH63996.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 93.0624]
gi|386204893|gb|EII09404.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 5.0959]
gi|386217820|gb|EII34305.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 4.0967]
gi|386224839|gb|EII47174.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 2.3916]
gi|386235153|gb|EII67129.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 2.4168]
gi|386240449|gb|EII77373.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli 3.2303]
gi|386253937|gb|EIJ03627.1| DNA-binding regulatory protein, YebC/PmpR family [Escherichia
coli B41]
gi|388337240|gb|EIL03742.1| hypothetical protein ECO9340_15279 [Escherichia coli O103:H25
str. CVM9340]
gi|388342707|gb|EIL08741.1| hypothetical protein ECO9450_18481 [Escherichia coli O103:H2 str.
CVM9450]
gi|388399109|gb|EIL59913.1| hypothetical protein EC75_21554 [Escherichia coli 75]
gi|388399960|gb|EIL60734.1| hypothetical protein EC5411_19815 [Escherichia coli 541-1]
gi|391249879|gb|EIQ09103.1| hypothetical protein SF285071_2203 [Shigella flexneri 2850-71]
gi|391253356|gb|EIQ12532.1| hypothetical protein SFK1770_2626 [Shigella flexneri K-1770]
gi|391268797|gb|EIQ27718.1| hypothetical protein SFK404_2573 [Shigella flexneri K-404]
gi|391285988|gb|EIQ44553.1| hypothetical protein SS322685_1877 [Shigella sonnei 3226-85]
gi|391287076|gb|EIQ45608.1| hypothetical protein SS323385_1393 [Shigella sonnei 3233-85]
gi|391295408|gb|EIQ53567.1| hypothetical protein SS482266_1383 [Shigella sonnei 4822-66]
gi|391305909|gb|EIQ63677.1| hypothetical protein ECEPECA12_2222 [Escherichia coli EPECa12]
gi|391313313|gb|EIQ70906.1| hypothetical protein ECEPECC34262_2377 [Escherichia coli EPEC
C342-62]
gi|391318000|gb|EIQ75227.1| hypothetical protein SF123566_2906 [Shigella flexneri 1235-66]
gi|397898136|gb|EJL14529.1| hypothetical protein SF660363_2156 [Shigella flexneri 6603-63]
gi|397902121|gb|EJL18451.1| hypothetical protein SSMOSELEY_1643 [Shigella sonnei str.
Moseley]
gi|408194237|gb|EKI19725.1| hypothetical protein ECTW15901_2204 [Escherichia coli TW15901]
gi|408202747|gb|EKI27809.1| hypothetical protein ECTW00353_2069 [Escherichia coli TW00353]
gi|408214910|gb|EKI39318.1| hypothetical protein EC3006_2219 [Escherichia coli 3006]
gi|408229396|gb|EKI52828.1| hypothetical protein ECN1_1839 [Escherichia coli N1]
gi|408344817|gb|EKJ59166.1| hypothetical protein EC01288_1935 [Escherichia coli 0.1288]
gi|408460854|gb|EKJ84632.1| hypothetical protein ECAD30_03460 [Escherichia coli AD30]
gi|408569666|gb|EKK45653.1| hypothetical protein EC80566_1904 [Escherichia coli 8.0566]
gi|408570908|gb|EKK46864.1| DNA-binding regulatory , YebC/PmpR family protein [Escherichia
coli 8.0569]
gi|412963180|emb|CCK47099.1| hypothetical protein BN16_24071 [Escherichia coli chi7122]
gi|412969733|emb|CCJ44372.1| hypothetical protein BN17_22821 [Escherichia coli]
gi|430885617|gb|ELC08488.1| hypothetical protein WCM_03937 [Escherichia coli KTE10]
gi|430940454|gb|ELC60637.1| hypothetical protein WGI_02597 [Escherichia coli KTE44]
gi|431007863|gb|ELD22674.1| hypothetical protein A15U_02321 [Escherichia coli KTE210]
gi|431054479|gb|ELD64049.1| hypothetical protein A191_04499 [Escherichia coli KTE233]
gi|431094655|gb|ELE00286.1| hypothetical protein A1SA_02702 [Escherichia coli KTE51]
gi|431105443|gb|ELE09778.1| hypothetical protein A1SK_04384 [Escherichia coli KTE56]
gi|431164143|gb|ELE64544.1| hypothetical protein A1UQ_02288 [Escherichia coli KTE77]
gi|431172081|gb|ELE72232.1| hypothetical protein A1UY_02447 [Escherichia coli KTE81]
gi|431200215|gb|ELE98941.1| hypothetical protein A1WY_02512 [Escherichia coli KTE111]
gi|431215404|gb|ELF13100.1| hypothetical protein A1YU_01447 [Escherichia coli KTE142]
gi|431222687|gb|ELF19963.1| hypothetical protein A31A_02502 [Escherichia coli KTE156]
gi|431227279|gb|ELF24416.1| hypothetical protein A31G_04022 [Escherichia coli KTE161]
gi|431243928|gb|ELF38256.1| hypothetical protein A31Q_02491 [Escherichia coli KTE171]
gi|431284454|gb|ELF75312.1| hypothetical protein WGE_02599 [Escherichia coli KTE42]
gi|431355051|gb|ELG41765.1| hypothetical protein A1WA_01833 [Escherichia coli KTE91]
gi|431405743|gb|ELG88976.1| hypothetical protein A311_02488 [Escherichia coli KTE146]
gi|431411610|gb|ELG94721.1| hypothetical protein A317_04470 [Escherichia coli KTE154]
gi|431453505|gb|ELH33912.1| hypothetical protein A13E_03185 [Escherichia coli KTE184]
gi|431457711|gb|ELH38048.1| hypothetical protein A153_02646 [Escherichia coli KTE196]
gi|431467969|gb|ELH47975.1| hypothetical protein A155_02515 [Escherichia coli KTE197]
gi|431556428|gb|ELI30207.1| hypothetical protein WIG_01982 [Escherichia coli KTE117]
gi|431566250|gb|ELI39289.1| hypothetical protein WII_02084 [Escherichia coli KTE120]
gi|431610835|gb|ELI80119.1| hypothetical protein WK1_01922 [Escherichia coli KTE138]
gi|431647455|gb|ELJ14939.1| hypothetical protein WKG_02139 [Escherichia coli KTE163]
gi|431657958|gb|ELJ24920.1| hypothetical protein WKI_02029 [Escherichia coli KTE166]
gi|431717152|gb|ELJ81254.1| hypothetical protein WGU_02164 [Escherichia coli KTE90]
gi|441609511|emb|CCP94925.1| FIG000859: hypothetical protein YebC [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|443422452|gb|AGC87356.1| hypothetical protein APECO78_13135 [Escherichia coli APEC O78]
gi|449321207|gb|EMD11222.1| hypothetical protein C201_08464 [Escherichia coli S17]
gi|449321456|gb|EMD11468.1| hypothetical protein A364_09695 [Escherichia coli SEPT362]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|400754937|ref|YP_006563305.1| hypothetical protein PGA2_c20690 [Phaeobacter gallaeciensis 2.10]
gi|398654090|gb|AFO88060.1| hypothetical protein PGA2_c20690 [Phaeobacter gallaeciensis 2.10]
Length = 271
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ LSK++ +A K G DP N RL + K S
Sbjct: 27 AGHSKWANIQHRKGRQDAARSKLFSKLSKEITVAAKM-GDPDPEKNPRLRLAVKEAKSQS 85
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
+P I+ AIK E Y E+ + P G A +V AM+ R
Sbjct: 86 VPKDVIDRAIKKSTAGEG-DDYEEIRYEGYGPN----------GVAVIVEAMTDNR 130
>gi|227552674|ref|ZP_03982723.1| protein of hypothetical function DUF28 [Enterococcus faecium
TX1330]
gi|424762087|ref|ZP_18189613.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecalis TX1337RF]
gi|227178203|gb|EEI59175.1| protein of hypothetical function DUF28 [Enterococcus faecium
TX1330]
gi|402425815|gb|EJV57960.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium TX1337RF]
Length = 251
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D K ++
Sbjct: 13 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-AGGPDPSMNPALRLVVDKAKAAN 71
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP +E AIK + Y E++ + P
Sbjct: 72 MPNDNVERAIKKATSAVDETNYDEITYEGYGP 103
>gi|193069908|ref|ZP_03050857.1| conserved hypothetical protein [Escherichia coli E110019]
gi|192956808|gb|EDV87262.1| conserved hypothetical protein [Escherichia coli E110019]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|445499047|ref|ZP_21465902.1| YebC-like DNA-binding protein [Janthinobacterium sp. HH01]
gi|444789042|gb|ELX10590.1| YebC-like DNA-binding protein [Janthinobacterium sp. HH01]
Length = 241
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA D ++ ++T L K++ +A + GGG D +N RL +D ++
Sbjct: 2 AGHSKWANIKHKKAATDAKRGKIWTRLIKEITVAARMGGG-DLTSNPRLRLAVDKAADAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
MP ++ AI E+ Y E+ + + G+A +V M+ RVR
Sbjct: 61 MPKDNVQRAITRGTGGEDGAAYEEVRYEGY----------GVGGAAVIVDCMTDNRVR 108
>gi|82543703|ref|YP_407650.1| hypothetical protein SBO_1187 [Shigella boydii Sb227]
gi|417681578|ref|ZP_12330952.1| hypothetical protein SB359474_1316 [Shigella boydii 3594-74]
gi|420352029|ref|ZP_14853193.1| hypothetical protein SB444474_1126 [Shigella boydii 4444-74]
gi|119392017|sp|Q322D6.1|YEBC_SHIBS RecName: Full=Probable transcriptional regulatory protein YebC
gi|81245114|gb|ABB65822.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|332096563|gb|EGJ01557.1| hypothetical protein SB359474_1316 [Shigella boydii 3594-74]
gi|391285590|gb|EIQ44168.1| hypothetical protein SB444474_1126 [Shigella boydii 4444-74]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|418737147|ref|ZP_13293545.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|410747306|gb|EKR00212.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
Length = 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIKK--------GTGELEGVVYEECL--YECFGPAGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|332981535|ref|YP_004462976.1| hypothetical protein Mahau_0956 [Mahella australiensis 50-1 BON]
gi|332699213|gb|AEE96154.1| protein of unknown function DUF28 [Mahella australiensis 50-1 BON]
Length = 250
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A D ++ +FT + ++L +AV+ GG +P N L I K ++
Sbjct: 2 SGHSKWANIKRKKEATDAQRGKIFTKIGRELAIAVRH-GGDNPEANSTLRDAIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TIE IK + Y EL + P G A +V A S R S
Sbjct: 61 MPNDTIERIIKKAAGALDSVNYEELVYEGYGPG----------GVAIIVEATSDNRNRTS 110
Query: 148 ANF 150
++
Sbjct: 111 SDI 113
>gi|183219483|ref|YP_001837479.1| hypothetical protein LEPBI_I0056 [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189909626|ref|YP_001961181.1| hypothetical protein LBF_0056 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|226734028|sp|B0S959.1|Y056_LEPBA RecName: Full=Probable transcriptional regulatory protein
LBF_0056
gi|226734029|sp|B0SJP0.1|Y056_LEPBP RecName: Full=Probable transcriptional regulatory protein
LEPBI_I0056
gi|167774302|gb|ABZ92603.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777905|gb|ABZ96203.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 247
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW IR K A D ++ +FT ++K++ +A KEGGG D N RL + K ++
Sbjct: 2 SGHSKWATIRRKKGAIDAKRGAIFTRIAKEISVAAKEGGG-DQEGNPRLRLAVTKAKAAN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|187731444|ref|YP_001879758.1| hypothetical protein SbBS512_E1108 [Shigella boydii CDC 3083-94]
gi|416270948|ref|ZP_11642877.1| hypothetical protein SDB_03147 [Shigella dysenteriae CDC 74-1112]
gi|416295984|ref|ZP_11651288.1| hypothetical protein SGF_01709 [Shigella flexneri CDC 796-83]
gi|420325706|ref|ZP_14827467.1| hypothetical protein SFCCH060_2029 [Shigella flexneri CCH060]
gi|420336336|ref|ZP_14837923.1| hypothetical protein SFK315_2082 [Shigella flexneri K-315]
gi|420379517|ref|ZP_14878997.1| hypothetical protein SD22575_1385 [Shigella dysenteriae 225-75]
gi|421682685|ref|ZP_16122493.1| hypothetical protein SF148580_2034 [Shigella flexneri 1485-80]
gi|187428436|gb|ACD07710.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|320174357|gb|EFW49506.1| hypothetical protein SDB_03147 [Shigella dysenteriae CDC 74-1112]
gi|320186109|gb|EFW60853.1| hypothetical protein SGF_01709 [Shigella flexneri CDC 796-83]
gi|391252502|gb|EIQ11697.1| hypothetical protein SFCCH060_2029 [Shigella flexneri CCH060]
gi|391262589|gb|EIQ21608.1| hypothetical protein SFK315_2082 [Shigella flexneri K-315]
gi|391304334|gb|EIQ62148.1| hypothetical protein SD22575_1385 [Shigella dysenteriae 225-75]
gi|404340344|gb|EJZ66768.1| hypothetical protein SF148580_2034 [Shigella flexneri 1485-80]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|161502987|ref|YP_001570099.1| hypothetical protein SARI_01049 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|189041144|sp|A9MND4.1|YEBC_SALAR RecName: Full=Probable transcriptional regulatory protein YebC
gi|160864334|gb|ABX20957.1| hypothetical protein SARI_01049 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 247
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|69245439|ref|ZP_00603434.1| Protein of unknown function DUF28 [Enterococcus faecium DO]
gi|257879850|ref|ZP_05659503.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257882576|ref|ZP_05662229.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257886026|ref|ZP_05665679.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257891691|ref|ZP_05671344.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257894166|ref|ZP_05673819.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|260559523|ref|ZP_05831704.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|261206674|ref|ZP_05921372.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289565035|ref|ZP_06445489.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|293553688|ref|ZP_06674312.1| conserved hypothetical protein [Enterococcus faecium E1039]
gi|293563189|ref|ZP_06677645.1| conserved hypothetical protein [Enterococcus faecium E1162]
gi|293570111|ref|ZP_06681191.1| conserved hypothetical protein [Enterococcus faecium E1071]
gi|294614904|ref|ZP_06694795.1| hypothetical protein EfmE1636_0985 [Enterococcus faecium E1636]
gi|294623700|ref|ZP_06702533.1| conserved hypothetical protein [Enterococcus faecium U0317]
gi|383329924|ref|YP_005355808.1| hypothetical protein EFAU004_02610 [Enterococcus faecium Aus0004]
gi|406579484|ref|ZP_11054715.1| hypothetical protein GMD4E_01395 [Enterococcus sp. GMD4E]
gi|406581807|ref|ZP_11056942.1| hypothetical protein GMD3E_01482 [Enterococcus sp. GMD3E]
gi|406584231|ref|ZP_11059266.1| hypothetical protein GMD2E_02122 [Enterococcus sp. GMD2E]
gi|406589698|ref|ZP_11064125.1| hypothetical protein GMD1E_03414 [Enterococcus sp. GMD1E]
gi|410937635|ref|ZP_11369494.1| hypothetical protein GMD5E_A08913 [Enterococcus sp. GMD5E]
gi|415892948|ref|ZP_11550047.1| conserved hypothetical protein [Enterococcus faecium E4453]
gi|416132448|ref|ZP_11597901.1| conserved hypothetical protein [Enterococcus faecium E4452]
gi|427397654|ref|ZP_18890136.1| UPF0082 protein [Enterococcus durans FB129-CNAB-4]
gi|430821488|ref|ZP_19440095.1| hypothetical protein OG9_04991 [Enterococcus faecium E0045]
gi|430824325|ref|ZP_19442889.1| hypothetical protein OGA_05338 [Enterococcus faecium E0120]
gi|430827190|ref|ZP_19445354.1| hypothetical protein OGC_04894 [Enterococcus faecium E0164]
gi|430830004|ref|ZP_19448073.1| hypothetical protein OGE_05088 [Enterococcus faecium E0269]
gi|430832565|ref|ZP_19450608.1| hypothetical protein OGG_05145 [Enterococcus faecium E0333]
gi|430835072|ref|ZP_19453071.1| hypothetical protein OGI_02253 [Enterococcus faecium E0679]
gi|430837164|ref|ZP_19455139.1| hypothetical protein OGK_04821 [Enterococcus faecium E0680]
gi|430839950|ref|ZP_19457886.1| hypothetical protein OGM_02386 [Enterococcus faecium E0688]
gi|430845360|ref|ZP_19463254.1| hypothetical protein OGQ_02616 [Enterococcus faecium E1050]
gi|430847153|ref|ZP_19465000.1| hypothetical protein OGS_01463 [Enterococcus faecium E1133]
gi|430851330|ref|ZP_19469080.1| hypothetical protein OGU_05215 [Enterococcus faecium E1185]
gi|430856270|ref|ZP_19473969.1| hypothetical protein OI1_04833 [Enterococcus faecium E1392]
gi|430859204|ref|ZP_19476819.1| hypothetical protein OI3_04281 [Enterococcus faecium E1552]
gi|430861030|ref|ZP_19478622.1| hypothetical protein OI5_03821 [Enterococcus faecium E1573]
gi|430867731|ref|ZP_19482629.1| hypothetical protein OI7_05132 [Enterococcus faecium E1574]
gi|430906589|ref|ZP_19485024.1| hypothetical protein OI9_04854 [Enterococcus faecium E1575]
gi|430964163|ref|ZP_19487611.1| hypothetical protein OIA_04708 [Enterococcus faecium E1576]
gi|431014808|ref|ZP_19490350.1| hypothetical protein OIC_04961 [Enterococcus faecium E1578]
gi|431216464|ref|ZP_19501215.1| hypothetical protein OIK_04668 [Enterococcus faecium E1620]
gi|431239327|ref|ZP_19503630.1| hypothetical protein OIM_04832 [Enterococcus faecium E1622]
gi|431265350|ref|ZP_19506052.1| hypothetical protein OIO_05210 [Enterococcus faecium E1623]
gi|431312213|ref|ZP_19508863.1| hypothetical protein OIQ_05406 [Enterococcus faecium E1626]
gi|431387259|ref|ZP_19511622.1| hypothetical protein OIS_05007 [Enterococcus faecium E1627]
gi|431449122|ref|ZP_19513963.1| hypothetical protein OIU_05169 [Enterococcus faecium E1630]
gi|431512499|ref|ZP_19515926.1| hypothetical protein OIW_03958 [Enterococcus faecium E1634]
gi|431560979|ref|ZP_19519611.1| hypothetical protein OK3_05519 [Enterococcus faecium E1731]
gi|431668792|ref|ZP_19524154.1| hypothetical protein OK7_04791 [Enterococcus faecium E1904]
gi|431744830|ref|ZP_19533696.1| hypothetical protein OKC_05033 [Enterococcus faecium E2071]
gi|431747450|ref|ZP_19536244.1| hypothetical protein OKE_05044 [Enterococcus faecium E2134]
gi|431749949|ref|ZP_19538679.1| hypothetical protein OKG_02125 [Enterococcus faecium E2297]
gi|431756201|ref|ZP_19544839.1| hypothetical protein OKK_05244 [Enterococcus faecium E2883]
gi|431761113|ref|ZP_19549700.1| hypothetical protein OKQ_05253 [Enterococcus faecium E3346]
gi|431766081|ref|ZP_19554577.1| hypothetical protein OKY_04556 [Enterococcus faecium E4215]
gi|431768631|ref|ZP_19557065.1| hypothetical protein OM1_04677 [Enterococcus faecium E1321]
gi|431777750|ref|ZP_19566001.1| hypothetical protein OM7_05586 [Enterococcus faecium E2560]
gi|431780446|ref|ZP_19568625.1| hypothetical protein OM9_02261 [Enterococcus faecium E4389]
gi|431783152|ref|ZP_19571274.1| hypothetical protein OMA_05155 [Enterococcus faecium E6012]
gi|431784108|ref|ZP_19572153.1| hypothetical protein OMC_03000 [Enterococcus faecium E6045]
gi|447913809|ref|YP_007395221.1| hypothetical protein M7W_2566 [Enterococcus faecium NRRL B-2354]
gi|68195821|gb|EAN10257.1| Protein of unknown function DUF28 [Enterococcus faecium DO]
gi|257814078|gb|EEV42836.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257818234|gb|EEV45562.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257821882|gb|EEV49012.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257828051|gb|EEV54677.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257830545|gb|EEV57152.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|260074622|gb|EEW62943.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|260079167|gb|EEW66860.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289163242|gb|EFD11088.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|291587483|gb|EFF19367.1| conserved hypothetical protein [Enterococcus faecium E1071]
gi|291592190|gb|EFF23808.1| hypothetical protein EfmE1636_0985 [Enterococcus faecium E1636]
gi|291596915|gb|EFF28133.1| conserved hypothetical protein [Enterococcus faecium U0317]
gi|291602263|gb|EFF32491.1| conserved hypothetical protein [Enterococcus faecium E1039]
gi|291604839|gb|EFF34317.1| conserved hypothetical protein [Enterococcus faecium E1162]
gi|364092986|gb|EHM35301.1| conserved hypothetical protein [Enterococcus faecium E4453]
gi|364093283|gb|EHM35566.1| conserved hypothetical protein [Enterococcus faecium E4452]
gi|378939618|gb|AFC64690.1| hypothetical protein EFAU004_02610 [Enterococcus faecium Aus0004]
gi|404455520|gb|EKA02367.1| hypothetical protein GMD4E_01395 [Enterococcus sp. GMD4E]
gi|404458995|gb|EKA05368.1| hypothetical protein GMD3E_01482 [Enterococcus sp. GMD3E]
gi|404464421|gb|EKA09962.1| hypothetical protein GMD2E_02122 [Enterococcus sp. GMD2E]
gi|404470450|gb|EKA15083.1| hypothetical protein GMD1E_03414 [Enterococcus sp. GMD1E]
gi|410733768|gb|EKQ75690.1| hypothetical protein GMD5E_A08913 [Enterococcus sp. GMD5E]
gi|425721965|gb|EKU84865.1| UPF0082 protein [Enterococcus durans FB129-CNAB-4]
gi|430438404|gb|ELA48838.1| hypothetical protein OG9_04991 [Enterococcus faecium E0045]
gi|430441340|gb|ELA51455.1| hypothetical protein OGA_05338 [Enterococcus faecium E0120]
gi|430444370|gb|ELA54225.1| hypothetical protein OGC_04894 [Enterococcus faecium E0164]
gi|430479322|gb|ELA56578.1| hypothetical protein OGE_05088 [Enterococcus faecium E0269]
gi|430479851|gb|ELA57061.1| hypothetical protein OGG_05145 [Enterococcus faecium E0333]
gi|430484740|gb|ELA61702.1| hypothetical protein OGI_02253 [Enterococcus faecium E0679]
gi|430487594|gb|ELA64314.1| hypothetical protein OGK_04821 [Enterococcus faecium E0680]
gi|430490190|gb|ELA66732.1| hypothetical protein OGM_02386 [Enterococcus faecium E0688]
gi|430495765|gb|ELA71901.1| hypothetical protein OGQ_02616 [Enterococcus faecium E1050]
gi|430534292|gb|ELA74753.1| hypothetical protein OGU_05215 [Enterococcus faecium E1185]
gi|430537826|gb|ELA78141.1| hypothetical protein OGS_01463 [Enterococcus faecium E1133]
gi|430544046|gb|ELA84091.1| hypothetical protein OI3_04281 [Enterococcus faecium E1552]
gi|430545103|gb|ELA85097.1| hypothetical protein OI1_04833 [Enterococcus faecium E1392]
gi|430550118|gb|ELA89927.1| hypothetical protein OI7_05132 [Enterococcus faecium E1574]
gi|430550619|gb|ELA90402.1| hypothetical protein OI5_03821 [Enterococcus faecium E1573]
gi|430554547|gb|ELA94149.1| hypothetical protein OI9_04854 [Enterococcus faecium E1575]
gi|430555224|gb|ELA94768.1| hypothetical protein OIA_04708 [Enterococcus faecium E1576]
gi|430559632|gb|ELA98980.1| hypothetical protein OIC_04961 [Enterococcus faecium E1578]
gi|430569829|gb|ELB08809.1| hypothetical protein OIK_04668 [Enterococcus faecium E1620]
gi|430571934|gb|ELB10806.1| hypothetical protein OIM_04832 [Enterococcus faecium E1622]
gi|430576185|gb|ELB14854.1| hypothetical protein OIO_05210 [Enterococcus faecium E1623]
gi|430579162|gb|ELB17698.1| hypothetical protein OIQ_05406 [Enterococcus faecium E1626]
gi|430580816|gb|ELB19282.1| hypothetical protein OIS_05007 [Enterococcus faecium E1627]
gi|430585514|gb|ELB23799.1| hypothetical protein OIU_05169 [Enterococcus faecium E1630]
gi|430586418|gb|ELB24675.1| hypothetical protein OIW_03958 [Enterococcus faecium E1634]
gi|430589820|gb|ELB27920.1| hypothetical protein OK3_05519 [Enterococcus faecium E1731]
gi|430599958|gb|ELB37640.1| hypothetical protein OK7_04791 [Enterococcus faecium E1904]
gi|430604990|gb|ELB42412.1| hypothetical protein OKC_05033 [Enterococcus faecium E2071]
gi|430606277|gb|ELB43635.1| hypothetical protein OKE_05044 [Enterococcus faecium E2134]
gi|430610900|gb|ELB48030.1| hypothetical protein OKG_02125 [Enterococcus faecium E2297]
gi|430615656|gb|ELB52600.1| hypothetical protein OKK_05244 [Enterococcus faecium E2883]
gi|430622487|gb|ELB59208.1| hypothetical protein OKQ_05253 [Enterococcus faecium E3346]
gi|430627151|gb|ELB63668.1| hypothetical protein OKY_04556 [Enterococcus faecium E4215]
gi|430628853|gb|ELB65283.1| hypothetical protein OM1_04677 [Enterococcus faecium E1321]
gi|430639043|gb|ELB74934.1| hypothetical protein OM7_05586 [Enterococcus faecium E2560]
gi|430639858|gb|ELB75713.1| hypothetical protein OM9_02261 [Enterococcus faecium E4389]
gi|430645825|gb|ELB81327.1| hypothetical protein OMA_05155 [Enterococcus faecium E6012]
gi|430650149|gb|ELB85503.1| hypothetical protein OMC_03000 [Enterococcus faecium E6045]
gi|445189518|gb|AGE31160.1| hypothetical protein M7W_2566 [Enterococcus faecium NRRL B-2354]
Length = 240
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-AGGPDPSMNPALRLVVDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP +E AIK + Y E++ + P
Sbjct: 61 MPNDNVERAIKKATSAVDETNYDEITYEGYGP 92
>gi|416278647|ref|ZP_11644651.1| hypothetical protein SGB_00148 [Shigella boydii ATCC 9905]
gi|417671948|ref|ZP_12321430.1| hypothetical protein SD15574_1533 [Shigella dysenteriae 155-74]
gi|417689903|ref|ZP_12339131.1| hypothetical protein SB521682_2156 [Shigella boydii 5216-82]
gi|420347167|ref|ZP_14848569.1| hypothetical protein SB96558_2112 [Shigella boydii 965-58]
gi|320182598|gb|EFW57487.1| hypothetical protein SGB_00148 [Shigella boydii ATCC 9905]
gi|332090041|gb|EGI95141.1| hypothetical protein SB521682_2156 [Shigella boydii 5216-82]
gi|332095261|gb|EGJ00288.1| hypothetical protein SD15574_1533 [Shigella dysenteriae 155-74]
gi|391271691|gb|EIQ30559.1| hypothetical protein SB96558_2112 [Shigella boydii 965-58]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|315634726|ref|ZP_07890010.1| YebC like protein [Aggregatibacter segnis ATCC 33393]
gi|315476674|gb|EFU67422.1| YebC like protein [Aggregatibacter segnis ATCC 33393]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI+ N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|22219064|pdb|1KON|A Chain A, Crystal Structure Of E.Coli Yebc
Length = 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 5 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 63
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 64 MTRDTLNRAI 73
>gi|444921761|ref|ZP_21241592.1| Putative transcriptional regulatory protein [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507139|gb|ELV07320.1| Putative transcriptional regulatory protein [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 248
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT L +++ +A + G DP +N RL +D ++
Sbjct: 2 AGHSKWANIQHRKGAQDAKRGKIFTRLIREITIATRMAGNGDPASNPRLRLAMDKALSNN 61
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 62 MSKDTMERAIK 72
>gi|85375730|ref|YP_459792.1| hypothetical protein ELI_14515 [Erythrobacter litoralis HTCC2594]
gi|84788813|gb|ABC64995.1| glucose-1-phosphate adenylyl transferase [Erythrobacter litoralis
HTCC2594]
Length = 248
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI H K A+D++++ LF+ LS+++ +A K G DP+ N RL ++ K S
Sbjct: 2 AGHSKFKNIMHRKGAQDKKRSNLFSKLSREITVAAKM-GTPDPDMNPRLRLAVNTAKAQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP I+ AI + ++ Y E+ + P GSA +V A++ R
Sbjct: 61 MPKDNIQRAIDKASAGDD-ENYEEVRYEGYGPG----------GSAIIVEALTDNR 105
>gi|157423294|gb|AAI53516.1| Zgc:162204 [Danio rerio]
Length = 272
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
V +AGH+KW ++ IK KD +A + + +++AV+E GG +P N LA ++ C+
Sbjct: 31 VSWAGHNKWSKVKDIKIPKDAARARVIAKYTMMIRIAVRE-GGPNPELNVGLAQILEQCR 89
Query: 85 KSSMPMTTIENAIK 98
++P TTIE A+K
Sbjct: 90 NKNLPKTTIEGALK 103
>gi|116330276|ref|YP_799994.1| hypothetical protein LBJ_0543 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|122281961|sp|Q04V34.1|Y543_LEPBJ RecName: Full=Probable transcriptional regulatory protein LBJ_0543
gi|116123965|gb|ABJ75236.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIKK--------GTGELEGVVYEECL--YECFGPAGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|113460653|ref|YP_718719.1| hypothetical protein HS_0508 [Haemophilus somnus 129PT]
gi|123327177|sp|Q0I244.1|Y508_HAES1 RecName: Full=Probable transcriptional regulatory protein HS_0508
gi|112822696|gb|ABI24785.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVGANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|350572171|ref|ZP_08940477.1| YebC like protein [Neisseria wadsworthii 9715]
gi|349790565|gb|EGZ44472.1| YebC like protein [Neisseria wadsworthii 9715]
Length = 242
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP +N RL +D ++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARLGGG-DPASNPRLRLAMDKAWDAN 60
Query: 88 MPMTTIENAIK--SCNVPENIY------GY------LELSCLPWKPTLSIARL 126
MP ++ AI + NV Y GY L + CL T ++A +
Sbjct: 61 MPKDNVQRAIDKGTGNVEGADYVELRYEGYGIGGAALMVDCLTDNKTRTVADV 113
>gi|251793069|ref|YP_003007795.1| hypothetical protein NT05HA_1356 [Aggregatibacter aphrophilus
NJ8700]
gi|422336610|ref|ZP_16417583.1| hypothetical protein HMPREF9335_00771 [Aggregatibacter
aphrophilus F0387]
gi|247534462|gb|ACS97708.1| conserved hypothetical protein [Aggregatibacter aphrophilus
NJ8700]
gi|353346796|gb|EHB91081.1| hypothetical protein HMPREF9335_00771 [Aggregatibacter
aphrophilus F0387]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|213417417|ref|ZP_03350559.1| hypothetical protein Salmonentericaenterica_05737 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 191
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|399993342|ref|YP_006573582.1| hypothetical protein PGA1_c21770 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398657897|gb|AFO91863.1| hypothetical protein PGA1_c21770 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ LSK++ +A K G DP N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKLSKEITVAAKM-GDPDPEKNPRLRLAVKEAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
+P I+ AIK E Y E+ + P G A +V AM+ R
Sbjct: 61 VPKDVIDRAIKKSTAGEG-DDYEEIRYEGYGPN----------GVAVIVEAMTDNR 105
>gi|170718044|ref|YP_001785083.1| hypothetical protein HSM_1763 [Haemophilus somnus 2336]
gi|226695950|sp|B0UVY2.1|Y1763_HAES2 RecName: Full=Probable transcriptional regulatory protein
HSM_1763
gi|168826173|gb|ACA31544.1| protein of unknown function DUF28 [Haemophilus somnus 2336]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVGANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|424779954|ref|ZP_18206840.1| hypothetical protein C683_0189 [Catellicoccus marimammalium
M35/04/3]
gi|422843493|gb|EKU27930.1| hypothetical protein C683_0189 [Catellicoccus marimammalium
M35/04/3]
Length = 241
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K+A+D ++ +F LS+++ +A K GG DP N L +D + +
Sbjct: 2 SGHSKWNNIKGRKSAQDAKRGKIFQKLSREIYVAAK-AGGPDPTANSSLRLVMDKARAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ AIK Y+EL+ + P
Sbjct: 61 MPKDNIQRAIKKATESGAGDHYMELTFEGYGP 92
>gi|421582943|ref|ZP_16028472.1| hypothetical protein CFSAN00328_03170, partial [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|402532409|gb|EJW39601.1| hypothetical protein CFSAN00328_03170, partial [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
Length = 249
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 5 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 63
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 64 MTRDTLNRAI 73
>gi|418789554|ref|ZP_13345341.1| hypothetical protein SEEN447_17108 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392760795|gb|EJA17630.1| hypothetical protein SEEN447_17108 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|168241528|ref|ZP_02666460.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194448488|ref|YP_002045952.1| hypothetical protein SeHA_C2113 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|386591736|ref|YP_006088136.1| hypothetical protein SU5_02510 [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|419730439|ref|ZP_14257385.1| hypothetical protein SEEH1579_03752 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419732124|ref|ZP_14259030.1| hypothetical protein SEEH1563_18154 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419738296|ref|ZP_14265061.1| hypothetical protein SEEH1573_15620 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419742312|ref|ZP_14268986.1| hypothetical protein SEEH1566_03517 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419747448|ref|ZP_14273968.1| hypothetical protein SEEH1565_15225 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421570956|ref|ZP_16016639.1| hypothetical protein CFSAN00322_12244 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421574706|ref|ZP_16020327.1| hypothetical protein CFSAN00325_07804 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421579687|ref|ZP_16025249.1| hypothetical protein CFSAN00326_09732 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|194406792|gb|ACF67011.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205339568|gb|EDZ26332.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|381294447|gb|EIC35586.1| hypothetical protein SEEH1579_03752 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381302664|gb|EIC43696.1| hypothetical protein SEEH1573_15620 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381302973|gb|EIC44002.1| hypothetical protein SEEH1563_18154 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381314183|gb|EIC54957.1| hypothetical protein SEEH1566_03517 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381318602|gb|EIC59322.1| hypothetical protein SEEH1565_15225 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383798780|gb|AFH45862.1| hypothetical protein YebC [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|402521162|gb|EJW28500.1| hypothetical protein CFSAN00326_09732 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402522591|gb|EJW29913.1| hypothetical protein CFSAN00322_12244 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402524906|gb|EJW32203.1| hypothetical protein CFSAN00325_07804 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|423140403|ref|ZP_17128041.1| hypothetical protein SEHO0A_01920 [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379052957|gb|EHY70848.1| hypothetical protein SEHO0A_01920 [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|416421661|ref|ZP_11689659.1| hypothetical protein SEEM315_16039 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416433735|ref|ZP_11697158.1| hypothetical protein SEEM971_05408 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416436556|ref|ZP_11698358.1| hypothetical protein SEEM973_09207 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416449018|ref|ZP_11706669.1| hypothetical protein SEEM974_06015 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416452337|ref|ZP_11708888.1| hypothetical protein SEEM201_06708 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416456506|ref|ZP_11711510.1| hypothetical protein SEEM202_10408 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416469385|ref|ZP_11718497.1| hypothetical protein SEEM954_10722 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416481725|ref|ZP_11723459.1| hypothetical protein SEEM054_02947 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416491034|ref|ZP_11726926.1| hypothetical protein SEEM675_03606 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416498168|ref|ZP_11730094.1| hypothetical protein SEEM965_14328 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416542602|ref|ZP_11751668.1| hypothetical protein SEEM19N_06216 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416579305|ref|ZP_11771163.1| hypothetical protein SEEM801_19092 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416585176|ref|ZP_11774729.1| hypothetical protein SEEM507_21561 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416589938|ref|ZP_11777454.1| hypothetical protein SEEM877_13418 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416601234|ref|ZP_11784898.1| hypothetical protein SEEM867_03722 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416604356|ref|ZP_11786116.1| hypothetical protein SEEM180_10987 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416612031|ref|ZP_11791210.1| hypothetical protein SEEM600_18980 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416619502|ref|ZP_11795164.1| hypothetical protein SEEM581_09044 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416629478|ref|ZP_11800142.1| hypothetical protein SEEM501_00615 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416638802|ref|ZP_11804170.1| hypothetical protein SEEM460_06835 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416651718|ref|ZP_11811235.1| hypothetical protein SEEM020_014715 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416666427|ref|ZP_11817501.1| hypothetical protein SEEM0077_21392 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416677004|ref|ZP_11822108.1| hypothetical protein SEEM0047_10500 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416699356|ref|ZP_11828632.1| hypothetical protein SEEM0055_06011 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416705015|ref|ZP_11830627.1| hypothetical protein SEEM0052_14766 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416711003|ref|ZP_11834961.1| hypothetical protein SEEM3312_13729 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416716871|ref|ZP_11839163.1| hypothetical protein SEEM5258_11026 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416722006|ref|ZP_11843065.1| hypothetical protein SEEM1156_16671 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416731579|ref|ZP_11849462.1| hypothetical protein SEEM9199_00854 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416737391|ref|ZP_11852623.1| hypothetical protein SEEM8282_15583 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416751152|ref|ZP_11860006.1| hypothetical protein SEEM8283_09076 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416758744|ref|ZP_11863842.1| hypothetical protein SEEM8284_21635 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416762304|ref|ZP_11866300.1| hypothetical protein SEEM8285_19099 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416771672|ref|ZP_11872907.1| hypothetical protein SEEM8287_03882 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418484078|ref|ZP_13053082.1| hypothetical protein SEEM906_02365 [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418490937|ref|ZP_13057468.1| hypothetical protein SEEM5278_12841 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418493741|ref|ZP_13060203.1| hypothetical protein SEEM5318_04752 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418497596|ref|ZP_13064013.1| hypothetical protein SEEM5320_03375 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418502329|ref|ZP_13068701.1| hypothetical protein SEEM5321_11012 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418509513|ref|ZP_13075807.1| hypothetical protein SEEM5327_18430 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418527732|ref|ZP_13093688.1| hypothetical protein SEEM8286_10456 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|322616899|gb|EFY13807.1| hypothetical protein SEEM315_16039 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618137|gb|EFY15029.1| hypothetical protein SEEM971_05408 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625808|gb|EFY22627.1| hypothetical protein SEEM973_09207 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626260|gb|EFY23070.1| hypothetical protein SEEM974_06015 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632674|gb|EFY29419.1| hypothetical protein SEEM201_06708 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322639018|gb|EFY35711.1| hypothetical protein SEEM202_10408 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640458|gb|EFY37111.1| hypothetical protein SEEM954_10722 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644223|gb|EFY40768.1| hypothetical protein SEEM054_02947 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649545|gb|EFY45977.1| hypothetical protein SEEM675_03606 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655453|gb|EFY51761.1| hypothetical protein SEEM965_14328 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660232|gb|EFY56470.1| hypothetical protein SEEM19N_06216 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662913|gb|EFY59120.1| hypothetical protein SEEM801_19092 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668098|gb|EFY64257.1| hypothetical protein SEEM507_21561 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674142|gb|EFY70236.1| hypothetical protein SEEM877_13418 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675504|gb|EFY71578.1| hypothetical protein SEEM867_03722 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683082|gb|EFY79098.1| hypothetical protein SEEM180_10987 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686776|gb|EFY82754.1| hypothetical protein SEEM600_18980 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195333|gb|EFZ80513.1| hypothetical protein SEEM581_09044 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199225|gb|EFZ84320.1| hypothetical protein SEEM501_00615 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204050|gb|EFZ89065.1| hypothetical protein SEEM460_06835 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323217465|gb|EGA02184.1| hypothetical protein SEEM0077_21392 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221956|gb|EGA06346.1| hypothetical protein SEEM0047_10500 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224434|gb|EGA08722.1| hypothetical protein SEEM0055_06011 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231487|gb|EGA15600.1| hypothetical protein SEEM0052_14766 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235929|gb|EGA20008.1| hypothetical protein SEEM3312_13729 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240499|gb|EGA24542.1| hypothetical protein SEEM5258_11026 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245391|gb|EGA29391.1| hypothetical protein SEEM1156_16671 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247811|gb|EGA31749.1| hypothetical protein SEEM9199_00854 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253610|gb|EGA37438.1| hypothetical protein SEEM8282_15583 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255039|gb|EGA38827.1| hypothetical protein SEEM8283_09076 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260272|gb|EGA43893.1| hypothetical protein SEEM8284_21635 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266863|gb|EGA50349.1| hypothetical protein SEEM8285_19099 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269069|gb|EGA52525.1| hypothetical protein SEEM8287_03882 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|366059863|gb|EHN24130.1| hypothetical protein SEEM906_02365 [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366063886|gb|EHN28097.1| hypothetical protein SEEM5318_04752 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366064053|gb|EHN28262.1| hypothetical protein SEEM5278_12841 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366075353|gb|EHN39410.1| hypothetical protein SEEM5320_03375 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366075685|gb|EHN39737.1| hypothetical protein SEEM5321_11012 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366078220|gb|EHN42225.1| hypothetical protein SEEM5327_18430 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366827465|gb|EHN54371.1| hypothetical protein SEEM020_014715 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372204360|gb|EHP17888.1| hypothetical protein SEEM8286_10456 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|16760849|ref|NP_456466.1| hypothetical protein STY2107 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16765241|ref|NP_460856.1| hypothetical protein STM1899 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29141459|ref|NP_804801.1| hypothetical protein t0978 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56413182|ref|YP_150257.1| hypothetical protein SPA0970 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161613545|ref|YP_001587510.1| hypothetical protein SPAB_01265 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167552465|ref|ZP_02346218.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167994200|ref|ZP_02575292.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168234039|ref|ZP_02659097.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168238529|ref|ZP_02663587.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168259826|ref|ZP_02681799.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168462569|ref|ZP_02696500.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168820723|ref|ZP_02832723.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194444208|ref|YP_002041164.1| hypothetical protein SNSL254_A2058 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194469640|ref|ZP_03075624.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736427|ref|YP_002114934.1| hypothetical protein SeSA_A2053 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250988|ref|YP_002146123.1| hypothetical protein SeAg_B1224 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264424|ref|ZP_03164498.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197362108|ref|YP_002141745.1| hypothetical protein SSPA0904 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198244624|ref|YP_002215186.1| hypothetical protein SeD_A1348 [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200390301|ref|ZP_03216912.1| conserved hypothetical protein TIGR01033 [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205352395|ref|YP_002226196.1| hypothetical protein SG1153 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856580|ref|YP_002243231.1| hypothetical protein SEN1104 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213426400|ref|ZP_03359150.1| hypothetical protein SentesTyphi_12659 [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213649295|ref|ZP_03379348.1| hypothetical protein SentesTy_19640 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213855275|ref|ZP_03383515.1| hypothetical protein SentesT_14892 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|238912041|ref|ZP_04655878.1| hypothetical protein SentesTe_13046 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|374980923|ref|ZP_09722253.1| hypothetical protein SEE_03001 [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|375000964|ref|ZP_09725304.1| hypothetical protein SEENIN0B_01267 [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|375118667|ref|ZP_09763834.1| UPF0082 protein yebC [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|375123197|ref|ZP_09768361.1| hypothetical protein SG9_1181 [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|378445290|ref|YP_005232922.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450504|ref|YP_005237863.1| hypothetical protein STM14_2310 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378699771|ref|YP_005181728.1| hypothetical protein SL1344_1834 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378955462|ref|YP_005212949.1| hypothetical protein SPUL_1783 [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|378959135|ref|YP_005216621.1| hypothetical protein STBHUCCB_10490 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378984465|ref|YP_005247620.1| hypothetical protein STMDT12_C19240 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378989245|ref|YP_005252409.1| hypothetical protein STMUK_1879 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379701084|ref|YP_005242812.1| protein YebC [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383496578|ref|YP_005397267.1| hypothetical protein UMN798_2003 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|409249655|ref|YP_006885477.1| UPF0082 protein yebC [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416504812|ref|ZP_11733394.1| hypothetical protein SEEM031_07744 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416512313|ref|ZP_11737702.1| hypothetical protein SEEM710_18471 [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416527974|ref|ZP_11743622.1| hypothetical protein SEEM010_17083 [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416535146|ref|ZP_11747510.1| hypothetical protein SEEM030_21723 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416550547|ref|ZP_11756039.1| hypothetical protein SEEM29N_07787 [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416562474|ref|ZP_11762174.1| hypothetical protein SEEM42N_03960 [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416570723|ref|ZP_11766218.1| hypothetical protein SEEM41H_18022 [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|417325734|ref|ZP_12111618.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|417333081|ref|ZP_12116756.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|417341163|ref|ZP_12122308.1| putative Integrase [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|417348460|ref|ZP_12127402.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|417364732|ref|ZP_12137578.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417382889|ref|ZP_12148725.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417390355|ref|ZP_12153863.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|417414875|ref|ZP_12158680.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|417457582|ref|ZP_12163841.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|417473884|ref|ZP_12169165.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|417510172|ref|ZP_12175155.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|417517787|ref|ZP_12180298.1| hypothetical protein LTSEUGA_1858 [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|417538359|ref|ZP_12190972.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|418513317|ref|ZP_13079548.1| hypothetical protein SEEPO729_02459 [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|418760794|ref|ZP_13316947.1| hypothetical protein SEEN185_08684 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418764809|ref|ZP_13320902.1| hypothetical protein SEEN199_18917 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418772438|ref|ZP_13328442.1| hypothetical protein SEEN539_04764 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418775626|ref|ZP_13331584.1| hypothetical protein SEEN953_09107 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418778109|ref|ZP_13334022.1| hypothetical protein SEEN188_08183 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418783232|ref|ZP_13339080.1| hypothetical protein SEEN559_00670 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418794716|ref|ZP_13350434.1| hypothetical protein SEEN449_21365 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418796951|ref|ZP_13352642.1| hypothetical protein SEEN567_18160 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418800795|ref|ZP_13356443.1| hypothetical protein SEEN202_05769 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418809452|ref|ZP_13365004.1| hypothetical protein SEEN550_19952 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418813605|ref|ZP_13369126.1| hypothetical protein SEEN513_08642 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418814872|ref|ZP_13370380.1| hypothetical protein SEEN538_10068 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418822659|ref|ZP_13378070.1| hypothetical protein SEEN425_14077 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418824909|ref|ZP_13380241.1| hypothetical protein SEEN462_23456 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418833676|ref|ZP_13388595.1| hypothetical protein SEEN486_22397 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836674|ref|ZP_13391558.1| hypothetical protein SEEN543_04328 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418840553|ref|ZP_13395382.1| hypothetical protein SEEN554_18484 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418844998|ref|ZP_13399784.1| hypothetical protein SEEN443_19112 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418850587|ref|ZP_13405303.1| hypothetical protein SEEN978_17271 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418852289|ref|ZP_13406991.1| hypothetical protein SEEN593_02665 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418859050|ref|ZP_13413659.1| hypothetical protein SEEN470_03746 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418863480|ref|ZP_13418018.1| hypothetical protein SEEN536_21350 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418868140|ref|ZP_13422583.1| hypothetical protein SEEN176_21439 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419789369|ref|ZP_14315049.1| hypothetical protein SEENLE01_21315 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419794385|ref|ZP_14319999.1| hypothetical protein SEENLE15_17274 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421358625|ref|ZP_15808922.1| hypothetical protein SEEE3139_11265 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421362595|ref|ZP_15812847.1| hypothetical protein SEEE0166_08212 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421367795|ref|ZP_15817988.1| hypothetical protein SEEE0631_11441 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370537|ref|ZP_15820702.1| hypothetical protein SEEE0424_02520 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378025|ref|ZP_15828114.1| hypothetical protein SEEE3076_17461 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421382634|ref|ZP_15832680.1| hypothetical protein SEEE4917_17767 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421387638|ref|ZP_15837637.1| hypothetical protein SEEE6622_20163 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421391741|ref|ZP_15841707.1| hypothetical protein SEEE6670_18111 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421395055|ref|ZP_15844994.1| hypothetical protein SEEE6426_12087 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421401319|ref|ZP_15851195.1| hypothetical protein SEEE6437_21413 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403079|ref|ZP_15852933.1| hypothetical protein SEEE7246_07476 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421410446|ref|ZP_15860227.1| hypothetical protein SEEE7250_21909 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412711|ref|ZP_15862465.1| hypothetical protein SEEE1427_10446 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421416704|ref|ZP_15866423.1| hypothetical protein SEEE2659_07891 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421421698|ref|ZP_15871366.1| hypothetical protein SEEE1757_10319 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421425126|ref|ZP_15874762.1| hypothetical protein SEEE5101_04866 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421431994|ref|ZP_15881571.1| hypothetical protein SEEE8B1_16776 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421436590|ref|ZP_15886117.1| hypothetical protein SEEE5518_16632 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421441348|ref|ZP_15890818.1| hypothetical protein SEEE1618_17864 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421446715|ref|ZP_15896127.1| hypothetical protein SEEE3079_21804 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421447824|ref|ZP_15897220.1| hypothetical protein SEEE6482_04655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421884123|ref|ZP_16315339.1| hypothetical protein SS209_01289 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|422026096|ref|ZP_16372505.1| hypothetical protein B571_09600 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422031126|ref|ZP_16377305.1| hypothetical protein B572_09681 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427550332|ref|ZP_18927812.1| hypothetical protein B576_09683 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427566444|ref|ZP_18932527.1| hypothetical protein B577_09109 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427586540|ref|ZP_18937316.1| hypothetical protein B573_09090 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427609893|ref|ZP_18942181.1| hypothetical protein B574_09381 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427633751|ref|ZP_18947076.1| hypothetical protein B575_09684 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427656139|ref|ZP_18951841.1| hypothetical protein B578_09349 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427661286|ref|ZP_18956753.1| hypothetical protein B579_09989 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427668918|ref|ZP_18961554.1| hypothetical protein B580_09692 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427767159|ref|ZP_18966726.1| hypothetical protein B581_11397 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|436609935|ref|ZP_20513766.1| hypothetical protein SEE22704_10363 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436730369|ref|ZP_20519284.1| hypothetical protein SEE30663_14305 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436797512|ref|ZP_20523258.1| hypothetical protein SEECHS44_08206 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436811420|ref|ZP_20530300.1| hypothetical protein SEEE1882_20947 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436815791|ref|ZP_20533342.1| hypothetical protein SEEE1884_13468 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436838938|ref|ZP_20537258.1| hypothetical protein SEEE1594_10439 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436851385|ref|ZP_20541984.1| hypothetical protein SEEE1566_11483 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436858149|ref|ZP_20546669.1| hypothetical protein SEEE1580_12575 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436865324|ref|ZP_20551291.1| hypothetical protein SEEE1543_13370 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436875503|ref|ZP_20557410.1| hypothetical protein SEEE1441_21831 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436883374|ref|ZP_20561803.1| hypothetical protein SEEE1810_21449 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436887765|ref|ZP_20564094.1| hypothetical protein SEEE1558_10104 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436896444|ref|ZP_20569200.1| hypothetical protein SEEE1018_13027 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436906423|ref|ZP_20575269.1| hypothetical protein SEEE1010_21201 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436911628|ref|ZP_20577457.1| hypothetical protein SEEE1729_09580 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436921103|ref|ZP_20583574.1| hypothetical protein SEEE0895_17694 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436930513|ref|ZP_20588738.1| hypothetical protein SEEE0899_20916 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436935580|ref|ZP_20591020.1| hypothetical protein SEEE1457_09621 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436942769|ref|ZP_20595715.1| hypothetical protein SEEE1747_10787 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436951738|ref|ZP_20600793.1| hypothetical protein SEEE0968_13619 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436964553|ref|ZP_20606189.1| hypothetical protein SEEE1444_18046 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436971470|ref|ZP_20609863.1| hypothetical protein SEEE1445_13816 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436985540|ref|ZP_20615060.1| hypothetical protein SEEE1559_17547 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436991493|ref|ZP_20617504.1| hypothetical protein SEEE1565_06970 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437012294|ref|ZP_20624807.1| hypothetical protein SEEE1808_21463 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437020736|ref|ZP_20627547.1| hypothetical protein SEEE1811_12324 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437029972|ref|ZP_20631154.1| hypothetical protein SEEE0956_07716 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437042389|ref|ZP_20635980.1| hypothetical protein SEEE1455_09251 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437052446|ref|ZP_20641869.1| hypothetical protein SEEE1575_16471 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437058100|ref|ZP_20644947.1| hypothetical protein SEEE1725_09414 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437067393|ref|ZP_20650313.1| hypothetical protein SEEE1745_13748 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437075791|ref|ZP_20654154.1| hypothetical protein SEEE1791_10302 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437086646|ref|ZP_20660655.1| hypothetical protein SEEE1795_20682 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437095378|ref|ZP_20664482.1| hypothetical protein SEEE6709_17372 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437100414|ref|ZP_20665901.1| hypothetical protein SEEE9058_01527 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437125995|ref|ZP_20674264.1| hypothetical protein SEEE0816_21337 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437134513|ref|ZP_20678937.1| hypothetical protein SEEE0819_22019 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437139756|ref|ZP_20682020.1| hypothetical protein SEEE3072_14746 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437147104|ref|ZP_20686656.1| hypothetical protein SEEE3089_15336 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437155395|ref|ZP_20691614.1| hypothetical protein SEEE9163_17581 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437158111|ref|ZP_20693053.1| hypothetical protein SEEE151_01955 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437171689|ref|ZP_20700793.1| hypothetical protein SEEEN202_18632 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437177338|ref|ZP_20703818.1| hypothetical protein SEEE3991_11281 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437187566|ref|ZP_20710047.1| hypothetical protein SEEE3618_20333 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437210670|ref|ZP_20712782.1| hypothetical protein SEEE1831_11447 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437261156|ref|ZP_20718226.1| hypothetical protein SEEE2490_12569 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437265756|ref|ZP_20720571.1| hypothetical protein SEEEL909_01803 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437281984|ref|ZP_20728985.1| hypothetical protein SEEEL913_21676 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437286579|ref|ZP_20730233.1| hypothetical protein SEEE4941_05348 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437308429|ref|ZP_20735470.1| hypothetical protein SEEE7015_09152 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437328678|ref|ZP_20740973.1| hypothetical protein SEEE7927_14147 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437344039|ref|ZP_20746053.1| hypothetical protein SEEECHS4_17129 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437372407|ref|ZP_20749434.1| hypothetical protein SEEE2558_13174 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437431647|ref|ZP_20756113.1| hypothetical protein SEEE2217_22834 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437435417|ref|ZP_20756503.1| hypothetical protein SEEE4018_01603 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437462593|ref|ZP_20762744.1| hypothetical protein SEEE6211_10384 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437478522|ref|ZP_20767535.1| hypothetical protein SEEE4441_11879 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437489710|ref|ZP_20770494.1| hypothetical protein SEEE4647_04025 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437506347|ref|ZP_20775630.1| hypothetical protein SEEE9845_07566 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437530052|ref|ZP_20780489.1| hypothetical protein SEEE9317_09361 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437553328|ref|ZP_20783970.1| hypothetical protein SEEE0116_04020 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437575214|ref|ZP_20790010.1| hypothetical protein SEEE1117_11634 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437592028|ref|ZP_20795006.1| hypothetical protein SEEE1392_14464 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437601479|ref|ZP_20797723.1| hypothetical protein SEEE0268_05137 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437617250|ref|ZP_20802886.1| hypothetical protein SEEE0316_08405 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437631566|ref|ZP_20806414.1| hypothetical protein SEEE0436_03382 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437657774|ref|ZP_20811209.1| hypothetical protein SEEE1319_04113 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437678304|ref|ZP_20817663.1| hypothetical protein SEEE4481_14340 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437688257|ref|ZP_20819691.1| hypothetical protein SEEE6297_00982 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437712663|ref|ZP_20827138.1| hypothetical protein SEEE4220_16233 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437719609|ref|ZP_20828673.1| hypothetical protein SEEE1616_00405 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437770880|ref|ZP_20835565.1| hypothetical protein SEEE2651_12987 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437802866|ref|ZP_20838459.1| hypothetical protein SEEE3944_02853 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437837293|ref|ZP_20845728.1| hypothetical protein SEEERB17_008743 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|438061761|ref|ZP_20856734.1| hypothetical protein SEEE5646_22958 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438090078|ref|ZP_20860380.1| hypothetical protein SEEE2625_14351 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438101192|ref|ZP_20864143.1| hypothetical protein SEEE1976_10455 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438112452|ref|ZP_20869049.1| hypothetical protein SEEE3407_12588 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438133148|ref|ZP_20873941.1| hypothetical protein SEEP9120_11019 [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|440764835|ref|ZP_20943859.1| hypothetical protein F434_17766 [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440768254|ref|ZP_20947227.1| hypothetical protein F514_11414 [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440774703|ref|ZP_20953590.1| hypothetical protein F515_19958 [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445137926|ref|ZP_21383779.1| hypothetical protein SEEG9184_016956 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|445148172|ref|ZP_21388682.1| hypothetical protein SEEDSL_008912 [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445150070|ref|ZP_21389531.1| hypothetical protein SEEDHWS_013959 [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445167834|ref|ZP_21394664.1| hypothetical protein SEE8A_015743 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445196733|ref|ZP_21400623.1| hypothetical protein SE20037_13610 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445221494|ref|ZP_21403185.1| hypothetical protein SEE10_006346 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445241961|ref|ZP_21407767.1| hypothetical protein SEE436_007763 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445338552|ref|ZP_21416125.1| hypothetical protein SEE18569_011281 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445349189|ref|ZP_21419968.1| hypothetical protein SEE13_007837 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445362295|ref|ZP_21424136.1| hypothetical protein SEE23_017403 [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|54040167|sp|P67180.1|YEBC_SALTI RecName: Full=Probable transcriptional regulatory protein YebC
gi|54042650|sp|P67179.1|YEBC_SALTY RecName: Full=Probable transcriptional regulatory protein YebC
gi|67461916|sp|Q5PMZ4.1|YEBC_SALPA RecName: Full=Probable transcriptional regulatory protein YebC
gi|25318108|pir||AG0743 conserved hypothetical protein STY2107 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16420435|gb|AAL20815.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16503146|emb|CAD05650.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137086|gb|AAO68650.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56127439|gb|AAV76945.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|161362909|gb|ABX66677.1| hypothetical protein SPAB_01265 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402871|gb|ACF63093.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194456004|gb|EDX44843.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711929|gb|ACF91150.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195633896|gb|EDX52248.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197093585|emb|CAR59048.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197214691|gb|ACH52088.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197242679|gb|EDY25299.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197288645|gb|EDY28020.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197939140|gb|ACH76473.1| conserved hypothetical protein TIGR01033 [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|199602746|gb|EDZ01292.1| conserved hypothetical protein TIGR01033 [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205272176|emb|CAR37034.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205322905|gb|EDZ10744.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205327899|gb|EDZ14663.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205331992|gb|EDZ18756.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205342638|gb|EDZ29402.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205350673|gb|EDZ37304.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206708383|emb|CAR32687.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261247069|emb|CBG24890.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267993882|gb|ACY88767.1| hypothetical protein STM14_2310 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158419|emb|CBW17928.1| hypothetical protein SL1344_1834 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912893|dbj|BAJ36867.1| hypothetical protein STMDT12_C19240 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320085483|emb|CBY95264.1| UPF0082 protein yebC [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321224543|gb|EFX49606.1| hypothetical protein SEE_03001 [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323130183|gb|ADX17613.1| protein YebC [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|326622934|gb|EGE29279.1| UPF0082 protein yebC [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|326627447|gb|EGE33790.1| hypothetical protein SG9_1181 [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|332988792|gb|AEF07775.1| hypothetical protein STMUK_1879 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353075652|gb|EHB41412.1| hypothetical protein SEENIN0B_01267 [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353575158|gb|EHC37973.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|353575528|gb|EHC38241.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|353579766|gb|EHC41226.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|353596335|gb|EHC53355.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353613505|gb|EHC65592.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353618989|gb|EHC69521.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353624321|gb|EHC73381.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353633772|gb|EHC80499.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|353647105|gb|EHC90319.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353649547|gb|EHC92143.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|353650857|gb|EHC93107.1| hypothetical protein LTSEUGA_1858 [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353666657|gb|EHD04395.1| Putative Integrase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|357206073|gb|AET54119.1| hypothetical protein SPUL_1783 [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|357958225|gb|EHJ82927.1| putative Integrase [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|363554731|gb|EHL38965.1| hypothetical protein SEEM010_17083 [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363557260|gb|EHL41467.1| hypothetical protein SEEM031_07744 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363566288|gb|EHL50305.1| hypothetical protein SEEM030_21723 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363568330|gb|EHL52313.1| hypothetical protein SEEM29N_07787 [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363569825|gb|EHL53774.1| hypothetical protein SEEM710_18471 [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363572805|gb|EHL56693.1| hypothetical protein SEEM42N_03960 [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363575176|gb|EHL59034.1| hypothetical protein SEEM41H_18022 [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366082214|gb|EHN46151.1| hypothetical protein SEEPO729_02459 [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|374353007|gb|AEZ44768.1| hypothetical protein STBHUCCB_10490 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|379986204|emb|CCF87612.1| hypothetical protein SS209_01289 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|380463399|gb|AFD58802.1| hypothetical protein UMN798_2003 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|392615128|gb|EIW97568.1| hypothetical protein SEENLE15_17274 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392615154|gb|EIW97593.1| hypothetical protein SEENLE01_21315 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392732552|gb|EIZ89763.1| hypothetical protein SEEN539_04764 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392741758|gb|EIZ98853.1| hypothetical protein SEEN199_18917 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392742346|gb|EIZ99436.1| hypothetical protein SEEN185_08684 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392748699|gb|EJA05685.1| hypothetical protein SEEN953_09107 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392755923|gb|EJA12822.1| hypothetical protein SEEN188_08183 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392757652|gb|EJA14538.1| hypothetical protein SEEN559_00670 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392760930|gb|EJA17761.1| hypothetical protein SEEN449_21365 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392770324|gb|EJA27052.1| hypothetical protein SEEN567_18160 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392773537|gb|EJA30233.1| hypothetical protein SEEN550_19952 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392774831|gb|EJA31526.1| hypothetical protein SEEN513_08642 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392783362|gb|EJA39987.1| hypothetical protein SEEN202_05769 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392786916|gb|EJA43464.1| hypothetical protein SEEN425_14077 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392793251|gb|EJA49695.1| hypothetical protein SEEN538_10068 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392795096|gb|EJA51479.1| hypothetical protein SEEN486_22397 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392801035|gb|EJA57265.1| hypothetical protein SEEN543_04328 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392811043|gb|EJA67055.1| hypothetical protein SEEN554_18484 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392813807|gb|EJA69771.1| hypothetical protein SEEN443_19112 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392818437|gb|EJA74321.1| hypothetical protein SEEN978_17271 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392819054|gb|EJA74929.1| hypothetical protein SEEN462_23456 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392829505|gb|EJA85175.1| hypothetical protein SEEN593_02665 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392831289|gb|EJA86923.1| hypothetical protein SEEN470_03746 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392833348|gb|EJA88963.1| hypothetical protein SEEN536_21350 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392838046|gb|EJA93610.1| hypothetical protein SEEN176_21439 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|395986315|gb|EJH95479.1| hypothetical protein SEEE0631_11441 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395987065|gb|EJH96228.1| hypothetical protein SEEE3139_11265 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395990419|gb|EJH99550.1| hypothetical protein SEEE0166_08212 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395997330|gb|EJI06371.1| hypothetical protein SEEE3076_17461 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395997742|gb|EJI06782.1| hypothetical protein SEEE4917_17767 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396006620|gb|EJI15583.1| hypothetical protein SEEE0424_02520 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396008463|gb|EJI17397.1| hypothetical protein SEEE6622_20163 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396010704|gb|EJI19616.1| hypothetical protein SEEE6670_18111 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396013792|gb|EJI22679.1| hypothetical protein SEEE6426_12087 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396021384|gb|EJI30210.1| hypothetical protein SEEE6437_21413 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396022579|gb|EJI31392.1| hypothetical protein SEEE7250_21909 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396030110|gb|EJI38845.1| hypothetical protein SEEE7246_07476 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396039799|gb|EJI48423.1| hypothetical protein SEEE1427_10446 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396041013|gb|EJI49636.1| hypothetical protein SEEE1757_10319 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396044881|gb|EJI53476.1| hypothetical protein SEEE2659_07891 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396051245|gb|EJI59763.1| hypothetical protein SEEE8B1_16776 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396052932|gb|EJI61437.1| hypothetical protein SEEE5518_16632 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396057596|gb|EJI66066.1| hypothetical protein SEEE5101_04866 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396062297|gb|EJI70710.1| hypothetical protein SEEE3079_21804 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396064951|gb|EJI73334.1| hypothetical protein SEEE1618_17864 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396074121|gb|EJI82412.1| hypothetical protein SEEE6482_04655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|414018387|gb|EKT02040.1| hypothetical protein B571_09600 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414019175|gb|EKT02797.1| hypothetical protein B576_09683 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414021090|gb|EKT04653.1| hypothetical protein B572_09681 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414032681|gb|EKT15674.1| hypothetical protein B577_09109 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414034556|gb|EKT17482.1| hypothetical protein B573_09090 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414037615|gb|EKT20377.1| hypothetical protein B574_09381 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414047480|gb|EKT29758.1| hypothetical protein B578_09349 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414048973|gb|EKT31200.1| hypothetical protein B575_09684 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414053454|gb|EKT35450.1| hypothetical protein B579_09989 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414059685|gb|EKT41242.1| hypothetical protein B580_09692 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414065235|gb|EKT46008.1| hypothetical protein B581_11397 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|434941092|gb|ELL47590.1| hypothetical protein SEEP9120_11019 [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434960854|gb|ELL54196.1| hypothetical protein SEECHS44_08206 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434964051|gb|ELL57073.1| hypothetical protein SEEE1882_20947 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434970127|gb|ELL62774.1| hypothetical protein SEE22704_10363 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434973907|gb|ELL66295.1| hypothetical protein SEEE1884_13468 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434980246|gb|ELL72167.1| hypothetical protein SEEE1594_10439 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434980688|gb|ELL72597.1| hypothetical protein SEE30663_14305 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|434986687|gb|ELL78338.1| hypothetical protein SEEE1566_11483 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434990301|gb|ELL81851.1| hypothetical protein SEEE1580_12575 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434995094|gb|ELL86411.1| hypothetical protein SEEE1441_21831 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|434996359|gb|ELL87675.1| hypothetical protein SEEE1543_13370 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435001819|gb|ELL92908.1| hypothetical protein SEEE1810_21449 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435009475|gb|ELM00261.1| hypothetical protein SEEE1558_10104 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435015000|gb|ELM05557.1| hypothetical protein SEEE1010_21201 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435016333|gb|ELM06859.1| hypothetical protein SEEE1018_13027 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435025873|gb|ELM16004.1| hypothetical protein SEEE1729_09580 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435027225|gb|ELM17354.1| hypothetical protein SEEE0895_17694 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435032168|gb|ELM22112.1| hypothetical protein SEEE0899_20916 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435038418|gb|ELM28199.1| hypothetical protein SEEE1457_09621 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435042968|gb|ELM32685.1| hypothetical protein SEEE1747_10787 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435048410|gb|ELM37975.1| hypothetical protein SEEE1444_18046 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435052205|gb|ELM41707.1| hypothetical protein SEEE0968_13619 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435057759|gb|ELM47128.1| hypothetical protein SEEE1445_13816 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435062380|gb|ELM51562.1| hypothetical protein SEEE1559_17547 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435063614|gb|ELM52762.1| hypothetical protein SEEE1808_21463 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435068070|gb|ELM57099.1| hypothetical protein SEEE1565_06970 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435079364|gb|ELM68075.1| hypothetical protein SEEE1811_12324 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435083006|gb|ELM71617.1| hypothetical protein SEEE0956_07716 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435084314|gb|ELM72900.1| hypothetical protein SEEE1455_09251 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435091046|gb|ELM79447.1| hypothetical protein SEEE1575_16471 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435093913|gb|ELM82252.1| hypothetical protein SEEE1725_09414 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435096114|gb|ELM84387.1| hypothetical protein SEEE1745_13748 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435102792|gb|ELM90895.1| hypothetical protein SEEE1795_20682 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435105088|gb|ELM93125.1| hypothetical protein SEEE1791_10302 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435109755|gb|ELM97701.1| hypothetical protein SEEE6709_17372 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435117076|gb|ELN04788.1| hypothetical protein SEEE0816_21337 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435119992|gb|ELN07594.1| hypothetical protein SEEE0819_22019 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435125210|gb|ELN12658.1| hypothetical protein SEEE9058_01527 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435131161|gb|ELN18388.1| hypothetical protein SEEE3072_14746 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435134734|gb|ELN21860.1| hypothetical protein SEEE3089_15336 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435138263|gb|ELN25290.1| hypothetical protein SEEE9163_17581 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435146211|gb|ELN33005.1| hypothetical protein SEEEN202_18632 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435152773|gb|ELN39396.1| hypothetical protein SEEE151_01955 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435155018|gb|ELN41576.1| hypothetical protein SEEE3991_11281 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435156810|gb|ELN43281.1| hypothetical protein SEEE3618_20333 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435163612|gb|ELN49748.1| hypothetical protein SEEE2490_12569 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435168602|gb|ELN54434.1| hypothetical protein SEEEL913_21676 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177120|gb|ELN62452.1| hypothetical protein SEEEL909_01803 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435184476|gb|ELN69405.1| hypothetical protein SEEE4941_05348 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435186024|gb|ELN70880.1| hypothetical protein SEEE7015_09152 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435190941|gb|ELN75513.1| hypothetical protein SEEE7927_14147 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435191093|gb|ELN75660.1| hypothetical protein SEEECHS4_17129 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435198658|gb|ELN82815.1| hypothetical protein SEEE2217_22834 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435203592|gb|ELN87334.1| hypothetical protein SEEE1831_11447 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435206158|gb|ELN89706.1| hypothetical protein SEEE2558_13174 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435213912|gb|ELN96778.1| hypothetical protein SEEE4018_01603 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435219259|gb|ELO01622.1| hypothetical protein SEEE6211_10384 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435221341|gb|ELO03614.1| hypothetical protein SEEE4441_11879 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435231513|gb|ELO12758.1| hypothetical protein SEEE4647_04025 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435234538|gb|ELO15392.1| hypothetical protein SEEE9845_07566 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435244828|gb|ELO24936.1| hypothetical protein SEEE9317_09361 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435244975|gb|ELO25082.1| hypothetical protein SEEE0116_04020 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435245179|gb|ELO25266.1| hypothetical protein SEEE1117_11634 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435253638|gb|ELO33108.1| hypothetical protein SEEE1392_14464 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435261015|gb|ELO40177.1| hypothetical protein SEEE0316_08405 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435261249|gb|ELO40410.1| hypothetical protein SEEE0268_05137 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435270970|gb|ELO49450.1| hypothetical protein SEEE1319_04113 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435273434|gb|ELO51703.1| hypothetical protein SEEE4481_14340 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435282974|gb|ELO60572.1| hypothetical protein SEEE6297_00982 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435283366|gb|ELO60941.1| hypothetical protein SEEE0436_03382 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435287224|gb|ELO64432.1| hypothetical protein SEEE4220_16233 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435295169|gb|ELO71695.1| hypothetical protein SEEE1616_00405 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435299191|gb|ELO75359.1| hypothetical protein SEEERB17_008743 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435303601|gb|ELO79458.1| hypothetical protein SEEE3944_02853 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435306066|gb|ELO81441.1| hypothetical protein SEEE2651_12987 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435313384|gb|ELO87066.1| hypothetical protein SEEE5646_22958 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435316649|gb|ELO89762.1| hypothetical protein SEEE2625_14351 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435324764|gb|ELO96692.1| hypothetical protein SEEE1976_10455 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435330530|gb|ELP01796.1| hypothetical protein SEEE3407_12588 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|436412926|gb|ELP10864.1| hypothetical protein F515_19958 [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436415518|gb|ELP13437.1| hypothetical protein F434_17766 [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|436418134|gb|ELP16020.1| hypothetical protein F514_11414 [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444843768|gb|ELX69021.1| hypothetical protein SEEDSL_008912 [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444843841|gb|ELX69088.1| hypothetical protein SEEG9184_016956 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444857281|gb|ELX82294.1| hypothetical protein SEEDHWS_013959 [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444864316|gb|ELX89118.1| hypothetical protein SE20037_13610 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444865131|gb|ELX89911.1| hypothetical protein SEE8A_015743 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444870290|gb|ELX94816.1| hypothetical protein SEE10_006346 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444872689|gb|ELX97007.1| hypothetical protein SEE18569_011281 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444875687|gb|ELX99884.1| hypothetical protein SEE13_007837 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444884275|gb|ELY08116.1| hypothetical protein SEE23_017403 [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|444890900|gb|ELY14194.1| hypothetical protein SEE436_007763 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|430762637|ref|YP_007218494.1| protein of unknown function DUF28 [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430012261|gb|AGA35013.1| protein of unknown function DUF28 [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ +A + GG DP +N RL D ++
Sbjct: 2 AGHSKWANIQHRKNAQDAKRGKLFTKLIREITVAAR-AGGADPASNPRLRLATDKALAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ A+K Y E+ + P G+A LV M+ R
Sbjct: 61 MTRDTIDRAVKRGAGAMEGDAYEEVRYEGYGPG----------GAAILVDCMTDNR 106
>gi|339999705|ref|YP_004730588.1| hypothetical protein SBG_1734 [Salmonella bongori NCTC 12419]
gi|339513066|emb|CCC30810.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|326681263|ref|XP_003201765.1| PREDICTED: translational activator of cytochrome c oxidase 1-like
[Danio rerio]
Length = 308
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
V +AGH+KW ++ IK KD +A + + +++AV+E GG +P N LA ++ C+
Sbjct: 67 VSWAGHNKWSKVKDIKIPKDAARARVIAKYTMMIRIAVRE-GGPNPELNVGLAQILEQCR 125
Query: 85 KSSMPMTTIENAIK 98
++P TTIE A+K
Sbjct: 126 NKNLPKTTIEGALK 139
>gi|314938219|ref|ZP_07845519.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133a04]
gi|314943114|ref|ZP_07849913.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133C]
gi|314949311|ref|ZP_07852654.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0082]
gi|314952245|ref|ZP_07855260.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133A]
gi|314992103|ref|ZP_07857553.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133B]
gi|314996285|ref|ZP_07861341.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133a01]
gi|389869739|ref|YP_006377162.1| hypothetical protein HMPREF0351_12556 [Enterococcus faecium DO]
gi|424789585|ref|ZP_18216230.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium V689]
gi|424797368|ref|ZP_18222966.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium S447]
gi|424849922|ref|ZP_18274349.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R501]
gi|424859977|ref|ZP_18283952.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R499]
gi|424869309|ref|ZP_18293021.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R497]
gi|424952111|ref|ZP_18367149.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R496]
gi|424954020|ref|ZP_18368943.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R494]
gi|424957025|ref|ZP_18371777.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R446]
gi|424960819|ref|ZP_18375300.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1986]
gi|424965084|ref|ZP_18379111.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1190]
gi|424967586|ref|ZP_18381279.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1140]
gi|424970935|ref|ZP_18384409.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1139]
gi|424974718|ref|ZP_18387935.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1137]
gi|424977471|ref|ZP_18390482.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1123]
gi|424979747|ref|ZP_18392581.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV99]
gi|424985880|ref|ZP_18398337.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV69]
gi|424986864|ref|ZP_18399266.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV38]
gi|424989904|ref|ZP_18402146.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV26]
gi|424995158|ref|ZP_18407055.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV168]
gi|424999149|ref|ZP_18410789.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV165]
gi|425001038|ref|ZP_18412574.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV161]
gi|425004981|ref|ZP_18416264.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV102]
gi|425008910|ref|ZP_18419964.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV1]
gi|425011300|ref|ZP_18422209.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium E422]
gi|425012928|ref|ZP_18423685.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium E417]
gi|425017680|ref|ZP_18428176.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium C621]
gi|425020436|ref|ZP_18430741.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium C497]
gi|425030240|ref|ZP_18435434.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium C1904]
gi|425033022|ref|ZP_18438025.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 515]
gi|425036366|ref|ZP_18441129.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 514]
gi|425038378|ref|ZP_18442996.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 513]
gi|425041979|ref|ZP_18446351.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 511]
gi|425046807|ref|ZP_18450795.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 510]
gi|425048036|ref|ZP_18451961.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 509]
gi|425053668|ref|ZP_18457198.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 506]
gi|425059181|ref|ZP_18462531.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 504]
gi|425061478|ref|ZP_18464704.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 503]
gi|313589529|gb|EFR68374.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133a01]
gi|313593317|gb|EFR72162.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133B]
gi|313595640|gb|EFR74485.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133A]
gi|313598173|gb|EFR77018.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133C]
gi|313642415|gb|EFS06995.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0133a04]
gi|313644317|gb|EFS08897.1| conserved hypothetical protein TIGR01033 [Enterococcus faecium
TX0082]
gi|388534988|gb|AFK60180.1| protein of hypothetical function DUF28 [Enterococcus faecium DO]
gi|402916507|gb|EJX37373.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R501]
gi|402921215|gb|EJX41674.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium S447]
gi|402921861|gb|EJX42279.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium V689]
gi|402926055|gb|EJX46123.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R499]
gi|402927718|gb|EJX47653.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R496]
gi|402935805|gb|EJX55021.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R497]
gi|402937805|gb|EJX56877.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R494]
gi|402944657|gb|EJX63055.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium R446]
gi|402944964|gb|EJX63343.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1190]
gi|402945756|gb|EJX64087.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1986]
gi|402954076|gb|EJX71731.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1140]
gi|402955675|gb|EJX73186.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1137]
gi|402960428|gb|EJX77572.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1139]
gi|402964963|gb|EJX81711.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV69]
gi|402965751|gb|EJX82441.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium P1123]
gi|402968189|gb|EJX84683.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV99]
gi|402975693|gb|EJX91633.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV38]
gi|402978057|gb|EJX93822.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV168]
gi|402980107|gb|EJX95736.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV165]
gi|402980826|gb|EJX96406.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV26]
gi|402987650|gb|EJY02697.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV161]
gi|402988022|gb|EJY03051.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV102]
gi|402991256|gb|EJY06062.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium ERV1]
gi|402997465|gb|EJY11786.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium E422]
gi|403002267|gb|EJY16260.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium E417]
gi|403003819|gb|EJY17674.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium C1904]
gi|403003888|gb|EJY17737.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium C621]
gi|403009242|gb|EJY22701.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium C497]
gi|403011429|gb|EJY24739.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 515]
gi|403015001|gb|EJY27949.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 514]
gi|403019625|gb|EJY32212.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 513]
gi|403023144|gb|EJY35430.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 510]
gi|403025001|gb|EJY37113.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 511]
gi|403029328|gb|EJY41089.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 506]
gi|403031762|gb|EJY43352.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 509]
gi|403036246|gb|EJY47603.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 504]
gi|403041226|gb|EJY52254.1| DNA-binding regulatory protein, YebC/PmpR family [Enterococcus
faecium 503]
Length = 251
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D K ++
Sbjct: 13 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-AGGPDPSMNPALRLVVDKAKAAN 71
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP +E AIK + Y E++ + P
Sbjct: 72 MPNDNVERAIKKATSAVDETNYDEITYEGYGP 103
>gi|118443572|ref|YP_877892.1| hypothetical protein NT01CX_1819 [Clostridium novyi NT]
gi|166219528|sp|A0PZU0.1|Y1819_CLONN RecName: Full=Probable transcriptional regulatory protein
NT01CX_1819
gi|118134028|gb|ABK61072.1| conserved hypothetical protein [Clostridium novyi NT]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D K +FT + ++L LA ++ GG++P+TN +L I K ++
Sbjct: 2 SGHSKWHNIQAKKGKNDAAKGRIFTKIGRELILAARD-GGSNPDTNAKLRDVIAKAKAAN 60
Query: 88 MPMTTIENAIK 98
MP TI+ AIK
Sbjct: 61 MPNDTIDRAIK 71
>gi|77163675|ref|YP_342200.1| hypothetical protein Noc_0137 [Nitrosococcus oceani ATCC 19707]
gi|254435466|ref|ZP_05048973.1| conserved hypothetical protein TIGR01033 [Nitrosococcus oceani
AFC27]
gi|119391262|sp|Q3JES6.1|Y137_NITOC RecName: Full=Probable transcriptional regulatory protein
Noc_0137
gi|76881989|gb|ABA56670.1| Protein of unknown function DUF28 [Nitrosococcus oceani ATCC
19707]
gi|207088577|gb|EDZ65849.1| conserved hypothetical protein TIGR01033 [Nitrosococcus oceani
AFC27]
Length = 248
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI++ K A+D ++ LFT L +++ +A + GG DP T+ RL + ID ++
Sbjct: 2 AGHSKWANIQYRKGAQDAKRGKLFTRLIREITVAARLEGG-DPATSPRLRTAIDKAFAAN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|62180477|ref|YP_216894.1| hypothetical protein SC1907 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224583596|ref|YP_002637394.1| hypothetical protein SPC_1814 [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|375114806|ref|ZP_09759976.1| UPF0082 protein yebC [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|75482767|sp|Q57N98.1|YEBC_SALCH RecName: Full=Probable transcriptional regulatory protein YebC
gi|62128110|gb|AAX65813.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224468123|gb|ACN45953.1| hypothetical protein SPC_1814 [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|322714952|gb|EFZ06523.1| UPF0082 protein yebC [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|416892604|ref|ZP_11923928.1| dATP pyrophosphohydrolase [Aggregatibacter aphrophilus ATCC
33389]
gi|347814302|gb|EGY30951.1| dATP pyrophosphohydrolase [Aggregatibacter aphrophilus ATCC
33389]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI AI+
Sbjct: 61 MTRDTINRAIE 71
>gi|294085858|ref|YP_003552618.1| hypothetical protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665433|gb|ADE40534.1| hypothetical cytosolic protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +F L K+L +A + TDP++N RL + + + ++
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKIFGRLIKELTVAAR--SSTDPDSNPRLRTALSAARAAN 59
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE +K E Y E+ + P G+A +V AM+ R
Sbjct: 60 MPKDNIERVLKRAEGGEG-ENYDEIRYEGYGPG----------GTALIVDAMTDNR 104
>gi|257464829|ref|ZP_05629200.1| hypothetical protein AM202_06235 [Actinobacillus minor 202]
gi|257450489|gb|EEV24532.1| hypothetical protein AM202_06235 [Actinobacillus minor 202]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVGSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|204930987|ref|ZP_03221813.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|452119902|ref|YP_007470150.1| hypothetical protein CFSAN001992_01935 [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|204320031|gb|EDZ05236.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|451908906|gb|AGF80712.1| hypothetical protein CFSAN001992_01935 [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|130485903|ref|NP_001076342.1| translational activator of cytochrome c oxidase 1 [Danio rerio]
gi|126631718|gb|AAI33904.1| Zgc:162204 protein [Danio rerio]
Length = 272
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
V +AGH+KW ++ IK KD +A + + +++AV+E GG +P N LA ++ C+
Sbjct: 31 VSWAGHNKWSKVKDIKIPKDAARARVIAKYTMMIRIAVRE-GGPNPELNVGLAQILEQCR 89
Query: 85 KSSMPMTTIENAIK 98
++P TTIE A+K
Sbjct: 90 NKNLPKTTIEGALK 103
>gi|405952921|gb|EKC20672.1| hypothetical protein CGI_10005632 [Crassostrea gigas]
Length = 242
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK+ NI+H K A+D +K+ L K + AVK GG TDP N +LA I+ KKSS
Sbjct: 2 AGHSKFSNIKHRKEAQDSKKSALMGQYVKLAQSAVKMGGSTDPKLNPKLAQVIESAKKSS 61
Query: 88 MPMTTI 93
+ + TI
Sbjct: 62 LGVETI 67
>gi|213162205|ref|ZP_03347915.1| hypothetical protein Salmoneentericaenterica_20298 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
Length = 182
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALANN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|88811439|ref|ZP_01126694.1| hypothetical protein NB231_11909 [Nitrococcus mobilis Nb-231]
gi|88791328|gb|EAR22440.1| hypothetical protein NB231_11909 [Nitrococcus mobilis Nb-231]
Length = 247
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT L +++ +A + GG +P+ N RL ID +
Sbjct: 2 AGHSKWANIQHRKKAQDAKRGKIFTKLIREITVAAR-VGGPNPDLNPRLRLAIDRALSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLE 111
MP IE AIK + + Y E
Sbjct: 61 MPKDNIERAIKRGAGTDELESYEE 84
>gi|119384640|ref|YP_915696.1| hypothetical protein Pden_1905 [Paracoccus denitrificans PD1222]
gi|166227488|sp|A1B3A6.1|Y1905_PARDP RecName: Full=Probable transcriptional regulatory protein Pden_1905
gi|119374407|gb|ABL70000.1| protein of unknown function DUF28 [Paracoccus denitrificans PD1222]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ ++ LF+ L+K++ +A K G DP N RL + K +S
Sbjct: 2 AGHSKWANIQHRKGKQDKLRSKLFSKLAKEITVAAK-MGDPDPEKNPRLRLAVKEAKSNS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ AIK + Y E+ + P G A +V AM+ R +
Sbjct: 61 MPKDVIDRAIKKSQGG-DAENYDEIRYEGYGPN----------GIAIIVEAMTDNRNRTA 109
Query: 148 ANFIS 152
+N S
Sbjct: 110 SNVRS 114
>gi|254441031|ref|ZP_05054524.1| conserved hypothetical protein TIGR01033 [Octadecabacter
antarcticus 307]
gi|198251109|gb|EDY75424.1| conserved hypothetical protein TIGR01033 [Octadecabacter
antarcticus 307]
Length = 251
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ + LF+ LSK++ +A K G DP+ N RL I K S
Sbjct: 2 AGHSKWANIQHRKGRQDKLRGKLFSKLSKEITIAAKM-GDPDPDHNPRLRMAIKEAKGLS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP I+ AIK + + Y E+ + P G A +V AM+
Sbjct: 61 MPKDNIDRAIKKA-IGGDAENYDEIRYEGYGPG----------GVAVIVEAMT 102
>gi|390566281|ref|ZP_10246714.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390170464|emb|CCF86059.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 249
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ KA D + +F+ L++++ +AV+E GG +P N RL I+ K+
Sbjct: 2 AGHSKWAQIKRQKAVTDYRRGAVFSKLAREIHVAVRE-GGANPEGNLRLRMAIERAKREG 60
Query: 88 MPMTTIENAIKSCN 101
MP TI+ A+ +
Sbjct: 61 MPNDTIDRALAKAS 74
>gi|416168919|ref|ZP_11608077.1| hypothetical protein NMBOX9930304_0536, partial [Neisseria
meningitidis OX99.30304]
gi|325130683|gb|EGC53423.1| hypothetical protein NMBOX9930304_0536 [Neisseria meningitidis
OX99.30304]
Length = 167
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|15677497|ref|NP_274653.1| hypothetical protein NMB1648 [Neisseria meningitidis MC58]
gi|385850810|ref|YP_005897325.1| hypothetical protein NMBM04240196_0588 [Neisseria meningitidis
M04-240196]
gi|385852754|ref|YP_005899268.1| hypothetical protein NMBH4476_0579 [Neisseria meningitidis H44/76]
gi|416160215|ref|ZP_11606105.1| hypothetical protein NMXN1568_0540 [Neisseria meningitidis N1568]
gi|416195771|ref|ZP_11617847.1| hypothetical protein NMBCU385_0543 [Neisseria meningitidis CU385]
gi|418288807|ref|ZP_12901237.1| hypothetical protein NMY233_1516 [Neisseria meningitidis NM233]
gi|418291075|ref|ZP_12903137.1| hypothetical protein NMY220_1536 [Neisseria meningitidis NM220]
gi|421551307|ref|ZP_15997302.1| hypothetical protein NMEN69166_1732 [Neisseria meningitidis 69166]
gi|421559671|ref|ZP_16005541.1| hypothetical protein NMEN92045_1644 [Neisseria meningitidis 92045]
gi|421561674|ref|ZP_16007513.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM2657]
gi|421568130|ref|ZP_16013858.1| hypothetical protein NMEN3001_1708 [Neisseria meningitidis NM3001]
gi|427827158|ref|ZP_18994201.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|433465622|ref|ZP_20423096.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM422]
gi|433471982|ref|ZP_20429362.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 68094]
gi|433473041|ref|ZP_20430405.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 97021]
gi|433478154|ref|ZP_20435469.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 70012]
gi|433481590|ref|ZP_20438855.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2006087]
gi|433483575|ref|ZP_20440805.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2002038]
gi|433486787|ref|ZP_20443978.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 97014]
gi|433488825|ref|ZP_20445979.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis M13255]
gi|433491009|ref|ZP_20448126.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM418]
gi|433505491|ref|ZP_20462426.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 9506]
gi|433507638|ref|ZP_20464541.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 9757]
gi|433509804|ref|ZP_20466665.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 12888]
gi|433511838|ref|ZP_20468656.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 4119]
gi|433526643|ref|ZP_20483268.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 69096]
gi|433539446|ref|ZP_20495917.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 70030]
gi|33517103|sp|Q9JYC7.1|Y1648_NEIMB RecName: Full=Probable transcriptional regulatory protein NMB1648
gi|7226899|gb|AAF41997.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|316984991|gb|EFV63945.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325128682|gb|EGC51548.1| hypothetical protein NMXN1568_0540 [Neisseria meningitidis N1568]
gi|325140707|gb|EGC63221.1| hypothetical protein NMBCU385_0543 [Neisseria meningitidis CU385]
gi|325199758|gb|ADY95213.1| hypothetical protein NMBH4476_0579 [Neisseria meningitidis H44/76]
gi|325205633|gb|ADZ01086.1| hypothetical protein NMBM04240196_0588 [Neisseria meningitidis
M04-240196]
gi|372200528|gb|EHP14593.1| hypothetical protein NMY220_1536 [Neisseria meningitidis NM220]
gi|372200982|gb|EHP14966.1| hypothetical protein NMY233_1516 [Neisseria meningitidis NM233]
gi|402328068|gb|EJU63449.1| hypothetical protein NMEN69166_1732 [Neisseria meningitidis 69166]
gi|402334788|gb|EJU70065.1| hypothetical protein NMEN92045_1644 [Neisseria meningitidis 92045]
gi|402336979|gb|EJU72234.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM2657]
gi|402342436|gb|EJU77601.1| hypothetical protein NMEN3001_1708 [Neisseria meningitidis NM3001]
gi|432201584|gb|ELK57663.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM422]
gi|432207023|gb|ELK63019.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 68094]
gi|432210642|gb|ELK66598.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 97021]
gi|432214081|gb|ELK69989.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 70012]
gi|432217421|gb|ELK73289.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2006087]
gi|432221005|gb|ELK76821.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 97014]
gi|432221700|gb|ELK77505.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2002038]
gi|432222010|gb|ELK77811.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis M13255]
gi|432226267|gb|ELK81999.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM418]
gi|432239807|gb|ELK95352.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 9506]
gi|432240184|gb|ELK95725.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 9757]
gi|432245514|gb|ELL00983.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 12888]
gi|432246090|gb|ELL01549.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 4119]
gi|432259275|gb|ELL14547.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 69096]
gi|432272203|gb|ELL27316.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 70030]
Length = 242
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP +N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGSNPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|300112850|ref|YP_003759425.1| hypothetical protein Nwat_0126 [Nitrosococcus watsonii C-113]
gi|299538787|gb|ADJ27104.1| protein of unknown function DUF28 [Nitrosococcus watsonii C-113]
Length = 249
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI++ K A+D ++ LFT L +++ +A + GG DP T+ RL + ID ++
Sbjct: 2 AGHSKWANIQYRKGAQDAKRGKLFTRLIREITVAARLEGG-DPATSPRLRTAIDKAFAAN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|240949853|ref|ZP_04754179.1| hypothetical protein AM305_01861 [Actinobacillus minor NM305]
gi|240295707|gb|EER46409.1| hypothetical protein AM305_01861 [Actinobacillus minor NM305]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGG-DVGSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|422022674|ref|ZP_16369181.1| hypothetical protein OO7_08965 [Providencia sneebia DSM 19967]
gi|414095844|gb|EKT57504.1| hypothetical protein OO7_08965 [Providencia sneebia DSM 19967]
Length = 247
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A + GGG DP+TN RL + +D ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAARLGGG-DPDTNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|381183452|ref|ZP_09892186.1| hypothetical protein KKC_09162 [Listeriaceae bacterium TTU M1-001]
gi|380316655|gb|EIA20040.1| hypothetical protein KKC_09162 [Listeriaceae bacterium TTU M1-001]
Length = 244
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW+NI+ K A+D ++A +F L+K++ +A K G DP N L +D K ++
Sbjct: 2 AGHSKWKNIQGRKNAQDSKRAKIFQKLAKEIYVAAK--NGPDPTLNPALRLVMDKAKAAN 59
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ AI+ + ++ Y E+S + P+ G A LV A++ + S
Sbjct: 60 MPNDNIDRAIQKASGNQSGENYDEVSYEGYGPS----------GVAVLVHALTDNKNRTS 109
Query: 148 AN 149
N
Sbjct: 110 TN 111
>gi|227875450|ref|ZP_03993591.1| protein of hypothetical function DUF28 [Mobiluncus mulieris ATCC
35243]
gi|269977298|ref|ZP_06184271.1| DNA-binding regulatory protein, YebC/PmpR family [Mobiluncus
mulieris 28-1]
gi|306818762|ref|ZP_07452484.1| YebC like protein [Mobiluncus mulieris ATCC 35239]
gi|227844004|gb|EEJ54172.1| protein of hypothetical function DUF28 [Mobiluncus mulieris ATCC
35243]
gi|269934601|gb|EEZ91162.1| DNA-binding regulatory protein, YebC/PmpR family [Mobiluncus
mulieris 28-1]
gi|304648448|gb|EFM45751.1| YebC like protein [Mobiluncus mulieris ATCC 35239]
Length = 253
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GGG DP N L I KKSS
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARTGGG-DPAGNPTLFDAIQKAKKSS 60
Query: 88 MPMTTIENAIKSCNVPEN 105
+P IE A+K + E+
Sbjct: 61 VPADNIERAVKRGSGAES 78
>gi|257055534|ref|YP_003133366.1| hypothetical protein Svir_15040 [Saccharomonospora viridis DSM
43017]
gi|256585406|gb|ACU96539.1| conserved hypothetical protein TIGR01033 [Saccharomonospora
viridis DSM 43017]
Length = 249
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW +H KAA D ++ LF L K +++A + GGG DP+ N L I KK+S
Sbjct: 2 AGHSKWATTKHKKAALDAKRGKLFAKLVKNIEVAARTGGG-DPDGNPTLYDAIQKAKKNS 60
Query: 88 MPMTTIENAIK 98
+P IE A K
Sbjct: 61 VPQDNIERARK 71
>gi|443320063|ref|ZP_21049191.1| DNA-binding regulatory protein, YebC/PmpR family [Gloeocapsa sp.
PCC 73106]
gi|442790215|gb|ELR99820.1| DNA-binding regulatory protein, YebC/PmpR family [Gloeocapsa sp.
PCC 73106]
Length = 250
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D ++ FT LS+ + +A ++ G DPN N++L S ID K +
Sbjct: 2 AGHSKWANIKRQKARVDAKRGKTFTQLSRAIIVAARQ-GFPDPNANFQLRSAIDKAKAAG 60
Query: 88 MPMTTIENAI 97
+P IE AI
Sbjct: 61 IPNENIERAI 70
>gi|296282046|ref|ZP_06860044.1| hypothetical protein CbatJ_00410 [Citromicrobium bathyomarinum
JL354]
Length = 247
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI H K A+D++++ LF+ LS+++ +A K G DP+ N RL ++ K S
Sbjct: 2 AGHSKFKNIMHRKGAQDKKRSNLFSKLSREITVAAKM-GMPDPDMNPRLRLAVNAAKAQS 60
Query: 88 MPMTTIENAIK--SCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFP 145
MP I+ AI S N +N Y E+ + P GSA +V A++ R
Sbjct: 61 MPKDNIQRAIDKASANDGDN---YEEVRYEGYGPG----------GSAIIVEALTDNRNR 107
Query: 146 PSANF 150
+ N
Sbjct: 108 TATNI 112
>gi|408374573|ref|ZP_11172258.1| hypothetical protein A11A3_10771 [Alcanivorax hongdengensis
A-11-3]
gi|407765531|gb|EKF73983.1| hypothetical protein A11A3_10771 [Alcanivorax hongdengensis
A-11-3]
Length = 244
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L +A K GG +P N RL + +D +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKM-GGPEPADNPRLRAAMDKALGQN 60
Query: 88 MPMTTIENAIK 98
M TI+ AIK
Sbjct: 61 MTKDTIDRAIK 71
>gi|307701103|ref|ZP_07638128.1| DNA-binding regulatory protein, YebC/PmpR family [Mobiluncus
mulieris FB024-16]
gi|307614098|gb|EFN93342.1| DNA-binding regulatory protein, YebC/PmpR family [Mobiluncus
mulieris FB024-16]
Length = 253
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GGG DP N L I KKSS
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVATRTGGG-DPAGNPTLFDAIQKAKKSS 60
Query: 88 MPMTTIENAIKSCNVPEN 105
+P IE A+K + E+
Sbjct: 61 VPADNIERAVKRGSGAES 78
>gi|238650874|ref|YP_002916729.1| hypothetical protein RPR_05505 [Rickettsia peacockii str. Rustic]
gi|259647082|sp|C4K280.1|Y5505_RICPU RecName: Full=Probable transcriptional regulatory protein RPR_05505
gi|238624972|gb|ACR47678.1| hypothetical protein RPR_05505 [Rickettsia peacockii str. Rustic]
Length = 253
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D ++A +FT L +++ +A K G +P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDTKRAKVFTKLIREIVIAAKTGSSNNPENNPRLRNALTAARIQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
+P I+ A+ S N N Y E+
Sbjct: 62 LPKERIDKALNSANDSSNNENYTEI 86
>gi|429745092|ref|ZP_19278535.1| DNA-binding regulatory protein, YebC/PmpR family [Neisseria sp.
oral taxon 020 str. F0370]
gi|429161299|gb|EKY03716.1| DNA-binding regulatory protein, YebC/PmpR family [Neisseria sp.
oral taxon 020 str. F0370]
Length = 241
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D ++ +FT L K++ +A + GGG DP +N RL +D ++
Sbjct: 2 AGHSKWANIQHKKARADAQRGKIFTRLIKEITVAARLGGG-DPASNPRLRLAMDKAWDAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVDYIEL 85
>gi|145588803|ref|YP_001155400.1| hypothetical protein Pnuc_0618 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|189040566|sp|A4SWH2.1|Y618_POLSQ RecName: Full=Probable transcriptional regulatory protein
Pnuc_0618
gi|145047209|gb|ABP33836.1| protein of unknown function DUF28 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 239
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T L K++ +A K GGG D N RL ID K ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGKIWTKLIKEITVAAKMGGG-DLTANPRLRLAIDKAKDAN 60
Query: 88 MPMTTIENAIK 98
MP ++ AI+
Sbjct: 61 MPNDNVQRAIQ 71
>gi|398338077|ref|ZP_10522782.1| hypothetical protein LkmesMB_22523 [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 249
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL + K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAVLKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK G +L + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIKK--------GTGDLEGVTYEECLY--ECFGPGGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L +A
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESA 145
>gi|405967229|gb|EKC32415.1| hypothetical protein CGI_10004333 [Crassostrea gigas]
Length = 185
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK+ NI+H K A+D +K+ L K + AVK GG TDP N +LA I+ KKSS
Sbjct: 2 AGHSKFSNIKHRKEAQDSKKSALMGQYVKLAQSAVKMGGSTDPKLNPKLAQVIESAKKSS 61
Query: 88 MPMTTIE 94
+ + TI+
Sbjct: 62 LGVETIK 68
>gi|309812854|ref|ZP_07706587.1| DNA-binding regulatory protein, YebC/PmpR family [Dermacoccus sp.
Ellin185]
gi|308433176|gb|EFP57075.1| DNA-binding regulatory protein, YebC/PmpR family [Dermacoccus sp.
Ellin185]
Length = 270
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GGG DP N L I KKSS
Sbjct: 15 SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEVAARSGGG-DPTGNPTLYDAIQKAKKSS 73
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWK 118
+P I+ A+K + E G E L ++
Sbjct: 74 VPNDNIDRAVKRGSGAE--AGGAEYQALTYE 102
>gi|254490177|ref|ZP_05103368.1| conserved hypothetical protein TIGR01033 [Methylophaga
thiooxidans DMS010]
gi|224464663|gb|EEF80921.1| conserved hypothetical protein TIGR01033 [Methylophaga
thiooxydans DMS010]
Length = 249
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ +A + GG+DP +N RL + ID ++
Sbjct: 2 AGHSKWANIQHRKGAQDAKRGKLFTKLIREITVAARM-GGSDPASNPRLRAAIDKALGNN 60
Query: 88 MPMTTIENAIK 98
M IE A K
Sbjct: 61 MTKDVIERATK 71
>gi|333978128|ref|YP_004516073.1| hypothetical protein Desku_0663 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821609|gb|AEG14272.1| UPF0082 protein yeeN [Desulfotomaculum kuznetsovii DSM 6115]
Length = 242
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KA D ++ LFT LS+++ +A + GGG DP+ N RL + I K+++
Sbjct: 2 SGHSKWSTIKRKKAKVDAQRGKLFTRLSREIIVAARLGGG-DPDANPRLKAAIQRAKEAN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
+P I+ AI+ + N E IY GY
Sbjct: 61 IPNENIQRAIQKGTGELGAANYEELIYEGY 90
>gi|145631437|ref|ZP_01787207.1| dATP pyrophosphohydrolase [Haemophilus influenzae R3021]
gi|319775817|ref|YP_004138305.1| hypothetical protein HICON_11610 [Haemophilus influenzae F3047]
gi|419839283|ref|ZP_14362696.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
haemolyticus HK386]
gi|144982974|gb|EDJ90483.1| dATP pyrophosphohydrolase [Haemophilus influenzae R3021]
gi|317450408|emb|CBY86624.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|386909591|gb|EIJ74260.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus
haemolyticus HK386]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|398331189|ref|ZP_10515894.1| hypothetical protein LalesM3_03919 [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 249
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AI+ G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIRK--------GTGELEGVVYEECL--YECFGSGGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|350562952|ref|ZP_08931775.1| protein of unknown function DUF28 [Thioalkalimicrobium aerophilum
AL3]
gi|349779818|gb|EGZ34159.1| protein of unknown function DUF28 [Thioalkalimicrobium aerophilum
AL3]
Length = 251
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 11/181 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D +K +FT L ++L +A K GG P N RL + +D + +
Sbjct: 2 AGHSKWANIKHRKARQDAKKGKVFTKLIRELVVAAK-AGGPHPEDNPRLRAAVDKALREN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
M TI+ AI + Y E+ + P +A +V CL +R
Sbjct: 61 MKRDTIDKAIARGAGNQEGDDYEEIRYEGYAPA-GVAVMVD-----CLTDNRNRTVGEVR 114
Query: 148 ANFISNRLGLFLECSEPITRMKQASVLLATALAHNVFP----VPGGPNRRTPLGGSIPRL 203
F L + S +KQ + LA + G + + GSI +
Sbjct: 115 HAFTKKGGNLGTDGSVAYMFVKQGLIQFEPGLAEDAVMEAAIEAGAEDVKVDSDGSIAVV 174
Query: 204 T 204
T
Sbjct: 175 T 175
>gi|145636551|ref|ZP_01792219.1| dATP pyrophosphohydrolase [Haemophilus influenzae PittHH]
gi|145270376|gb|EDK10311.1| dATP pyrophosphohydrolase [Haemophilus influenzae PittHH]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRTAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|404328503|ref|ZP_10968951.1| hypothetical protein SvinD2_00350 [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 241
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A D + +F LSK + L + GGG DP+ N L I+ K ++
Sbjct: 2 SGHSKWNNIQHKKNAMDAIRGKIFMKLSKDIFLEARHGGG-DPDMNAGLRHAIEKAKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I AIK + Y E++ + P
Sbjct: 61 MPNDNISRAIKKATGDLDGVTYDEITYEGYGP 92
>gi|334144114|ref|YP_004537270.1| hypothetical protein Thicy_1024 [Thioalkalimicrobium cyclicum ALM1]
gi|333965025|gb|AEG31791.1| UPF0082 protein yeeN [Thioalkalimicrobium cyclicum ALM1]
Length = 251
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D +K +FT L ++L +A K GG P N RL S ID +
Sbjct: 2 AGHSKWANIKHRKARQDAKKGKVFTKLIRELVVAAK-AGGPHPEDNPRLRSAIDKALGEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSR 141
M TI+ AI + Y E+ + P +A +V CL +R
Sbjct: 61 MRRDTIDKAIARGAGNQEGDDYEEIRYEGYAPA-GVAVMVD-----CLTDNRNR 108
>gi|417840764|ref|ZP_12486872.1| UPF0082 protein [Haemophilus haemolyticus M19501]
gi|341950575|gb|EGT77162.1| UPF0082 protein [Haemophilus haemolyticus M19501]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|417845373|ref|ZP_12491402.1| UPF0082 protein [Haemophilus haemolyticus M21639]
gi|341955209|gb|EGT81670.1| UPF0082 protein [Haemophilus haemolyticus M21639]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|254454053|ref|ZP_05067490.1| conserved hypothetical protein TIGR01033 [Octadecabacter arcticus
238]
gi|198268459|gb|EDY92729.1| conserved hypothetical protein TIGR01033 [Octadecabacter arcticus
238]
Length = 251
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ + LF+ LSK++ +A K G DP+ N RL I K S
Sbjct: 2 AGHSKWANIQHRKGRQDKLRGKLFSKLSKEITIAAKM-GDPDPDHNPRLRMAIKEAKVLS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP I+ AIK + + Y E+ + P G A +V AM+
Sbjct: 61 MPKDNIDRAIKKA-IGGDAENYDEIRYEGYGPG----------GVAVIVEAMT 102
>gi|103485832|ref|YP_615393.1| hypothetical protein Sala_0337 [Sphingopyxis alaskensis RB2256]
gi|118574345|sp|Q1GWB2.1|Y337_SPHAL RecName: Full=Probable transcriptional regulatory protein Sala_0337
gi|98975909|gb|ABF52060.1| protein of unknown function DUF28 [Sphingopyxis alaskensis RB2256]
Length = 248
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI H K A+D++++ LF+ LS+++ +A K G DP+ N RL + ++ K S
Sbjct: 2 AGHSKFKNIMHRKGAQDKKRSALFSKLSREITVAAKM-GLPDPDANARLRAAVNAAKAQS 60
Query: 88 MPMTTIENAIKSCN 101
MP I+ AI +
Sbjct: 61 MPKDNIQRAIDKAS 74
>gi|342904011|ref|ZP_08725813.1| UPF0082 protein [Haemophilus haemolyticus M21621]
gi|342904687|ref|ZP_08726486.1| UPF0082 protein [Haemophilus haemolyticus M21621]
gi|341953108|gb|EGT79622.1| UPF0082 protein [Haemophilus haemolyticus M21621]
gi|341954020|gb|EGT80514.1| UPF0082 protein [Haemophilus haemolyticus M21621]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|229829046|ref|ZP_04455115.1| hypothetical protein GCWU000342_01131 [Shuttleworthia satelles DSM
14600]
gi|229792209|gb|EEP28323.1| hypothetical protein GCWU000342_01131 [Shuttleworthia satelles DSM
14600]
Length = 242
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGPDPGNNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPT 120
+P TIE IK + Y++ + + P+
Sbjct: 61 VPNDTIERGIKKAAGDADSVNYIQATYEGYGPS 93
>gi|417843033|ref|ZP_12489110.1| UPF0082 protein [Haemophilus haemolyticus M21127]
gi|341950267|gb|EGT76856.1| UPF0082 protein [Haemophilus haemolyticus M21127]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|162455673|ref|YP_001618040.1| hypothetical protein sce7391 [Sorangium cellulosum So ce56]
gi|161166255|emb|CAN97560.1| hypothetical protein sce7391 [Sorangium cellulosum So ce56]
Length = 284
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ LFT L K++ +A + GGG DPN N RL I+ K +
Sbjct: 37 SGHSKWATIKRKKGALDAKRGKLFTKLIKEITVASRMGGG-DPNGNPRLRKAINDAKGQA 95
Query: 88 MPMTTIENAIK 98
MP TI+ AI+
Sbjct: 96 MPADTIKRAIQ 106
>gi|329123661|ref|ZP_08252221.1| YebC like protein [Haemophilus aegyptius ATCC 11116]
gi|327469860|gb|EGF15325.1| YebC like protein [Haemophilus aegyptius ATCC 11116]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGIGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|319942478|ref|ZP_08016789.1| hypothetical protein HMPREF9464_02008 [Sutterella wadsworthensis
3_1_45B]
gi|319803951|gb|EFW00867.1| hypothetical protein HMPREF9464_02008 [Sutterella wadsworthensis
3_1_45B]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K +D +++ L+T L +++ +A + GGG DP+TN RL + + +
Sbjct: 2 SGHSKWANIQHRKGRQDAKRSNLWTKLVREIIVAARMGGG-DPDTNSRLRLALIKARGGN 60
Query: 88 MPMTTIENAI 97
+P TI+NAI
Sbjct: 61 VPKDTIQNAI 70
>gi|89071234|ref|ZP_01158415.1| hypothetical protein OG2516_04648 [Oceanicola granulosus HTCC2516]
gi|89043247|gb|EAR49476.1| hypothetical protein OG2516_04648 [Oceanicola granulosus HTCC2516]
Length = 249
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LF+ L+K++ +A K G DP+ N RL + K +S
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKLAKEITVAAKM-GDPDPDKNPRLRLAVKEAKSNS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
+P I+ AIK V + Y E+ + P G A +V AM+ R
Sbjct: 61 VPKDVIDRAIKKA-VGGDAENYEEIRYEGYGPG----------GVAVIVEAMTDNR 105
>gi|395225307|ref|ZP_10403834.1| DNA-binding regulatory protein, YebC/PmpR family [Thiovulum sp. ES]
gi|394446554|gb|EJF07375.1| DNA-binding regulatory protein, YebC/PmpR family [Thiovulum sp. ES]
Length = 238
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K A D ++ LFT L K + A K+GGG DP+ N L + K +S
Sbjct: 2 AGHSKWANIKRRKGAVDAKRGVLFTKLVKDIVTAAKQGGG-DPDMNPSLRLAVQKAKDNS 60
Query: 88 MPMTTIENAIKSC 100
MP I+ AI
Sbjct: 61 MPHDNIQRAIDKA 73
>gi|456865061|gb|EMF83426.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira weilii
serovar Topaz str. LT2116]
Length = 249
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRIGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK ++ G + CL G A +VSA++ + R
Sbjct: 61 MPKDNIERAIKKGT--GDLEGVVYEECL--------YECFGSGGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM 168
P I +LG L S ++R+
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRL 133
>gi|255065724|ref|ZP_05317579.1| protein YebC [Neisseria sicca ATCC 29256]
gi|255050042|gb|EET45506.1| protein YebC [Neisseria sicca ATCC 29256]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|298369963|ref|ZP_06981279.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281423|gb|EFI22912.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|291563835|emb|CBL42651.1| conserved hypothetical protein TIGR01033 [butyrate-producing
bacterium SS3/4]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+K+ NI+H K D K +FT + +++ +AVKE GG DP N +L I K ++
Sbjct: 2 SGHNKFSNIKHKKEKNDAAKGKIFTVIGREIAVAVKE-GGADPANNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ IK N Y L+ + P+ G A +V ++ + +
Sbjct: 61 MPNDTIDRGIKKAAGDLNSVNYENLTYEGYGPS----------GVAIIVDTLTDNKNRTA 110
Query: 148 ANFIS 152
AN S
Sbjct: 111 ANVRS 115
>gi|417770411|ref|ZP_12418319.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418682672|ref|ZP_13243886.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418706519|ref|ZP_13267366.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|418712581|ref|ZP_13273318.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. UI 08452]
gi|421115021|ref|ZP_15575435.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|400325594|gb|EJO77869.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|409947552|gb|EKN97548.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Pomona str. Pomona]
gi|410013742|gb|EKO71819.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410763848|gb|EKR34568.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|410790951|gb|EKR84635.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. UI 08452]
gi|455665733|gb|EMF31235.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Pomona str. Fox 32256]
Length = 249
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AI+ G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIRK--------GTGELEGVTYEECL--YECFGPGGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|358067471|ref|ZP_09153950.1| hypothetical protein HMPREF9333_00831 [Johnsonella ignava ATCC
51276]
gi|356694387|gb|EHI56049.1| hypothetical protein HMPREF9333_00831 [Johnsonella ignava ATCC
51276]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DPN N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTIIGREIAVAVKE-GGPDPNNNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSC 100
+P TIE IK
Sbjct: 61 VPNDTIERGIKKA 73
>gi|225077141|ref|ZP_03720340.1| hypothetical protein NEIFLAOT_02196 [Neisseria flavescens
NRL30031/H210]
gi|224951489|gb|EEG32698.1| hypothetical protein NEIFLAOT_02196 [Neisseria flavescens
NRL30031/H210]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|313667975|ref|YP_004048259.1| hypothetical protein NLA_6360 [Neisseria lactamica 020-06]
gi|313005437|emb|CBN86872.1| conserved hypothetical protein [Neisseria lactamica 020-06]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|121635288|ref|YP_975533.1| hypothetical protein NMC1563 [Neisseria meningitidis FAM18]
gi|218768670|ref|YP_002343182.1| hypothetical protein NMA1902 [Neisseria meningitidis Z2491]
gi|254805403|ref|YP_003083624.1| hypothetical protein NMO_1466 [Neisseria meningitidis alpha14]
gi|261400903|ref|ZP_05987028.1| protein YebC [Neisseria lactamica ATCC 23970]
gi|268599682|ref|ZP_06133849.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|304386882|ref|ZP_07369144.1| YebC like protein [Neisseria meningitidis ATCC 13091]
gi|385323742|ref|YP_005878181.1| hypothetical protein NMV_0736 [Neisseria meningitidis 8013]
gi|385328915|ref|YP_005883218.1| hypothetical protein NMBB_1882 [Neisseria meningitidis alpha710]
gi|385338487|ref|YP_005892360.1| hypothetical protein NMAA_1365 [Neisseria meningitidis WUE 2594]
gi|385340503|ref|YP_005894375.1| hypothetical protein NMBG2136_1518 [Neisseria meningitidis G2136]
gi|385341487|ref|YP_005895358.1| hypothetical protein NMBM01240149_0541 [Neisseria meningitidis
M01-240149]
gi|385857682|ref|YP_005904194.1| hypothetical protein NMBNZ0533_1621 [Neisseria meningitidis
NZ-05/33]
gi|416177048|ref|ZP_11609899.1| hypothetical protein NMBM6190_0481 [Neisseria meningitidis M6190]
gi|416182291|ref|ZP_11611961.1| hypothetical protein NMBM13399_0592 [Neisseria meningitidis M13399]
gi|416186876|ref|ZP_11613983.1| hypothetical protein NMBM0579_0595 [Neisseria meningitidis M0579]
gi|416191022|ref|ZP_11615995.1| hypothetical protein NMBES14902_0637 [Neisseria meningitidis
ES14902]
gi|416212424|ref|ZP_11621887.1| hypothetical protein NMBM01240013_0656 [Neisseria meningitidis
M01-240013]
gi|421538381|ref|ZP_15984557.1| hypothetical protein NMEN93003_1364 [Neisseria meningitidis 93003]
gi|421540895|ref|ZP_15987032.1| hypothetical protein NMEN93004_1769 [Neisseria meningitidis 93004]
gi|421542923|ref|ZP_15989025.1| hypothetical protein NMEN255_1567 [Neisseria meningitidis NM255]
gi|421544942|ref|ZP_15991010.1| hypothetical protein NMEN140_1507 [Neisseria meningitidis NM140]
gi|421547030|ref|ZP_15993070.1| hypothetical protein NMEN183_1542 [Neisseria meningitidis NM183]
gi|421549277|ref|ZP_15995295.1| hypothetical protein NMEN2781_1739 [Neisseria meningitidis NM2781]
gi|421553236|ref|ZP_15999202.1| hypothetical protein NMEN576_1570 [Neisseria meningitidis NM576]
gi|421557626|ref|ZP_16003527.1| hypothetical protein NMEN80179_1701 [Neisseria meningitidis 80179]
gi|421563819|ref|ZP_16009634.1| hypothetical protein NMEN2795_1654 [Neisseria meningitidis NM2795]
gi|433467728|ref|ZP_20425179.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 87255]
gi|433469769|ref|ZP_20427181.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 98080]
gi|433476094|ref|ZP_20433431.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 88050]
gi|433493031|ref|ZP_20450119.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM586]
gi|433495147|ref|ZP_20452211.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM762]
gi|433497320|ref|ZP_20454351.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis M7089]
gi|433499413|ref|ZP_20456419.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis M7124]
gi|433501350|ref|ZP_20458333.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM174]
gi|433503365|ref|ZP_20460324.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM126]
gi|433513994|ref|ZP_20470781.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 63049]
gi|433516162|ref|ZP_20472927.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2004090]
gi|433518072|ref|ZP_20474814.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 96023]
gi|433520359|ref|ZP_20477074.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 65014]
gi|433522419|ref|ZP_20479104.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 61103]
gi|433524558|ref|ZP_20481216.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 97020]
gi|433528743|ref|ZP_20485351.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM3652]
gi|433530952|ref|ZP_20487536.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM3642]
gi|433533220|ref|ZP_20489779.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2007056]
gi|433534939|ref|ZP_20491475.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2001212]
gi|433537130|ref|ZP_20493631.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 77221]
gi|433541532|ref|ZP_20497979.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 63006]
gi|33517102|sp|Q9JTB0.1|Y1902_NEIMA RecName: Full=Probable transcriptional regulatory protein NMA1902
gi|166231411|sp|A1KV56.1|Y1563_NEIMF RecName: Full=Probable transcriptional regulatory protein NMC1563
gi|120866994|emb|CAM10757.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
gi|121052678|emb|CAM09019.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
gi|254668945|emb|CBA07203.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
gi|261392129|emb|CAX49629.1| conserved hypothetical protein [Neisseria meningitidis 8013]
gi|268583813|gb|EEZ48489.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|269209266|gb|EEZ75721.1| protein YebC [Neisseria lactamica ATCC 23970]
gi|304339041|gb|EFM05133.1| YebC like protein [Neisseria meningitidis ATCC 13091]
gi|308389767|gb|ADO32087.1| hypothetical protein NMBB_1882 [Neisseria meningitidis alpha710]
gi|319410901|emb|CBY91295.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
gi|325132768|gb|EGC55450.1| hypothetical protein NMBM6190_0481 [Neisseria meningitidis M6190]
gi|325134686|gb|EGC57325.1| hypothetical protein NMBM13399_0592 [Neisseria meningitidis M13399]
gi|325136702|gb|EGC59302.1| hypothetical protein NMBM0579_0595 [Neisseria meningitidis M0579]
gi|325138669|gb|EGC61224.1| hypothetical protein NMBES14902_0637 [Neisseria meningitidis
ES14902]
gi|325144886|gb|EGC67173.1| hypothetical protein NMBM01240013_0656 [Neisseria meningitidis
M01-240013]
gi|325198747|gb|ADY94203.1| hypothetical protein NMBG2136_1518 [Neisseria meningitidis G2136]
gi|325201693|gb|ADY97147.1| hypothetical protein NMBM01240149_0541 [Neisseria meningitidis
M01-240149]
gi|325208571|gb|ADZ04023.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
gi|389605264|emb|CCA44184.1| UPF0082 protein MCA1220 [Neisseria meningitidis alpha522]
gi|402316186|gb|EJU51736.1| hypothetical protein NMEN255_1567 [Neisseria meningitidis NM255]
gi|402316408|gb|EJU51953.1| hypothetical protein NMEN93003_1364 [Neisseria meningitidis 93003]
gi|402317552|gb|EJU53089.1| hypothetical protein NMEN93004_1769 [Neisseria meningitidis 93004]
gi|402322229|gb|EJU57694.1| hypothetical protein NMEN183_1542 [Neisseria meningitidis NM183]
gi|402322435|gb|EJU57896.1| hypothetical protein NMEN140_1507 [Neisseria meningitidis NM140]
gi|402324667|gb|EJU60099.1| hypothetical protein NMEN2781_1739 [Neisseria meningitidis NM2781]
gi|402328547|gb|EJU63915.1| hypothetical protein NMEN576_1570 [Neisseria meningitidis NM576]
gi|402334339|gb|EJU69629.1| hypothetical protein NMEN80179_1701 [Neisseria meningitidis 80179]
gi|402339899|gb|EJU75106.1| hypothetical protein NMEN2795_1654 [Neisseria meningitidis NM2795]
gi|432201839|gb|ELK57913.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 87255]
gi|432202021|gb|ELK58090.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 98080]
gi|432209203|gb|ELK65174.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 88050]
gi|432226964|gb|ELK82680.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM586]
gi|432228889|gb|ELK84583.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM762]
gi|432232496|gb|ELK88140.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis M7089]
gi|432233256|gb|ELK88887.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis M7124]
gi|432234129|gb|ELK89751.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM174]
gi|432239607|gb|ELK95157.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM126]
gi|432246305|gb|ELL01758.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 63049]
gi|432252080|gb|ELL07439.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2004090]
gi|432252590|gb|ELL07943.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 96023]
gi|432252940|gb|ELL08288.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 65014]
gi|432258270|gb|ELL13558.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 61103]
gi|432258785|gb|ELL14066.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 97020]
gi|432264422|gb|ELL19626.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM3652]
gi|432265452|gb|ELL20646.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2007056]
gi|432265762|gb|ELL20954.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis NM3642]
gi|432270689|gb|ELL25825.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 2001212]
gi|432272491|gb|ELL27599.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 77221]
gi|432276655|gb|ELL31711.1| DNA-binding regulatory , YebC/PmpR family protein [Neisseria
meningitidis 63006]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|24213420|ref|NP_710901.1| hypothetical protein LA_0720 [Leptospira interrogans serovar Lai
str. 56601]
gi|45658716|ref|YP_002802.1| hypothetical protein LIC12886 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386073060|ref|YP_005987377.1| hypothetical protein LIF_A0586 [Leptospira interrogans serovar Lai
str. IPAV]
gi|417760114|ref|ZP_12408142.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. 2002000624]
gi|417764294|ref|ZP_12412264.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|417775724|ref|ZP_12423575.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. 2002000621]
gi|417786754|ref|ZP_12434442.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. C10069]
gi|418669662|ref|ZP_13231041.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|418673802|ref|ZP_13235113.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. 2002000623]
gi|418688663|ref|ZP_13249807.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. FPW2026]
gi|418702019|ref|ZP_13262937.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418711254|ref|ZP_13272019.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|418722454|ref|ZP_13281620.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. UI 12621]
gi|418729656|ref|ZP_13288203.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. UI 12758]
gi|421083760|ref|ZP_15544631.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
santarosai str. HAI1594]
gi|421101977|ref|ZP_15562587.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|421121047|ref|ZP_15581348.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. Brem 329]
gi|421125676|ref|ZP_15585921.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421135272|ref|ZP_15595396.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|33517031|sp|Q8F839.1|Y720_LEPIN RecName: Full=Probable transcriptional regulatory protein LA_0720
gi|49037276|sp|P62038.1|Y2886_LEPIC RecName: Full=Probable transcriptional regulatory protein LIC_12886
gi|24194184|gb|AAN47919.1|AE011259_10 conserved hypothetical protein [Leptospira interrogans serovar Lai
str. 56601]
gi|45601960|gb|AAS71439.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353456849|gb|AER01394.1| conserved hypothetical protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|400353530|gb|EJP05699.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|400362163|gb|EJP18107.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. FPW2026]
gi|409944073|gb|EKN89662.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. 2002000624]
gi|409950029|gb|EKO04560.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. C10069]
gi|409963822|gb|EKO27544.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. UI 12621]
gi|410020530|gb|EKO87331.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410346036|gb|EKO97068.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. Brem 329]
gi|410368122|gb|EKP23500.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410433677|gb|EKP78017.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
santarosai str. HAI1594]
gi|410436782|gb|EKP85893.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|410574598|gb|EKQ37629.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. 2002000621]
gi|410579080|gb|EKQ46930.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. 2002000623]
gi|410754593|gb|EKR16243.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|410759151|gb|EKR25370.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410768407|gb|EKR43655.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|410775834|gb|EKR55825.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans str. UI 12758]
gi|455791809|gb|EMF43603.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Lora str. TE 1992]
gi|456824629|gb|EMF73055.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Canicola str. LT1962]
gi|456969473|gb|EMG10477.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
gi|456988000|gb|EMG23179.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
interrogans serovar Copenhageni str. LT2050]
Length = 249
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AI+ G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIRK--------GTGELEGVTYEECL--YECFGPGGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|421616329|ref|ZP_16057343.1| hypothetical protein B597_05482 [Pseudomonas stutzeri KOS6]
gi|409781712|gb|EKN61289.1| hypothetical protein B597_05482 [Pseudomonas stutzeri KOS6]
Length = 249
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L ++L +A K GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKRGKIFTKLIRELTVAAKHGGGV-PADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M I+ AI ELS + P+ G A ++ AM+ R
Sbjct: 61 MSRDVIDRAIARGAGSSEADNMTELSYEGYAPS----------GVAIIIEAMTDNR 106
>gi|340361415|ref|ZP_08683843.1| YebC like protein [Neisseria macacae ATCC 33926]
gi|349608910|ref|ZP_08888326.1| hypothetical protein HMPREF1028_00301 [Neisseria sp. GT4A_CT1]
gi|339888644|gb|EGQ78084.1| YebC like protein [Neisseria macacae ATCC 33926]
gi|348615246|gb|EGY64774.1| hypothetical protein HMPREF1028_00301 [Neisseria sp. GT4A_CT1]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|259501480|ref|ZP_05744382.1| glucose-1-phosphate adenylyltransferase [Lactobacillus iners DSM
13335]
gi|302191551|ref|ZP_07267805.1| hypothetical protein LineA_06049 [Lactobacillus iners AB-1]
gi|309803904|ref|ZP_07697988.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LactinV 11V1-d]
gi|309806210|ref|ZP_07700226.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LactinV 03V1-b]
gi|309808350|ref|ZP_07702253.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LactinV 01V1-a]
gi|309809489|ref|ZP_07703347.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners SPIN 2503V10-D]
gi|312871681|ref|ZP_07731770.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LEAF 3008A-a]
gi|312872829|ref|ZP_07732892.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LEAF 2062A-h1]
gi|312873671|ref|ZP_07733717.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LEAF 2052A-d]
gi|312875256|ref|ZP_07735265.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LEAF 2053A-b]
gi|315653329|ref|ZP_07906251.1| glucose-1-phosphate adenylyltransferase [Lactobacillus iners ATCC
55195]
gi|325911877|ref|ZP_08174281.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners UPII 143-D]
gi|325913061|ref|ZP_08175432.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners UPII 60-B]
gi|329920006|ref|ZP_08276884.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners SPIN 1401G]
gi|349612389|ref|ZP_08891610.1| hypothetical protein HMPREF1027_01037 [Lactobacillus sp. 7_1_47FAA]
gi|259167111|gb|EEW51606.1| glucose-1-phosphate adenylyltransferase [Lactobacillus iners DSM
13335]
gi|308163999|gb|EFO66262.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LactinV 11V1-d]
gi|308167429|gb|EFO69592.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LactinV 03V1-b]
gi|308168413|gb|EFO70528.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LactinV 01V1-a]
gi|308170161|gb|EFO72196.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners SPIN 2503V10-D]
gi|311089219|gb|EFQ47654.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LEAF 2053A-b]
gi|311090771|gb|EFQ49169.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LEAF 2052A-d]
gi|311091638|gb|EFQ50019.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LEAF 2062A-h1]
gi|311092781|gb|EFQ51136.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners LEAF 3008A-a]
gi|315489254|gb|EFU78894.1| glucose-1-phosphate adenylyltransferase [Lactobacillus iners ATCC
55195]
gi|325476383|gb|EGC79545.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners UPII 143-D]
gi|325477617|gb|EGC80758.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners UPII 60-B]
gi|328936777|gb|EGG33217.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
iners SPIN 1401G]
gi|348608985|gb|EGY58952.1| hypothetical protein HMPREF1027_01037 [Lactobacillus sp. 7_1_47FAA]
Length = 243
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D +K +F LS++L +A K GG DP+ N L +D + ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKKGKIFQKLSRELFMAAK-SGGPDPSGNPSLRLVMDKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP + IE AIK + + Y E++ + P G A LV A++
Sbjct: 61 MPKSNIERAIKKAEGNSDEH-YDEITYEGYAPG----------GVAVLVEALT 102
>gi|167772172|ref|ZP_02444225.1| hypothetical protein ANACOL_03547 [Anaerotruncus colihominis DSM
17241]
gi|167665970|gb|EDS10100.1| DNA-binding regulatory protein, YebC/PmpR family [Anaerotruncus
colihominis DSM 17241]
Length = 247
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++A +FT + +++ +A +E GG DPN N RLA+ I K ++
Sbjct: 2 SGHSKWANIKRKKEKTDGQRAKIFTKIGREITVAARE-GGPDPNNNSRLATLIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPT 120
+P IE +K E Y E++ + P+
Sbjct: 61 VPNDNIERLLKKAG--EGKEDYEEITYEGYGPS 91
>gi|419798168|ref|ZP_14323594.1| DNA-binding regulatory protein, YebC/PmpR family [Neisseria sicca
VK64]
gi|385695901|gb|EIG26437.1| DNA-binding regulatory protein, YebC/PmpR family [Neisseria sicca
VK64]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|229845016|ref|ZP_04465153.1| hypothetical protein CGSHi6P18H1_04662 [Haemophilus influenzae
6P18H1]
gi|229812150|gb|EEP47842.1| hypothetical protein CGSHi6P18H1_04662 [Haemophilus influenzae
6P18H1]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|261379885|ref|ZP_05984458.1| protein YebC [Neisseria subflava NJ9703]
gi|319637842|ref|ZP_07992608.1| hypothetical protein HMPREF0604_00231 [Neisseria mucosa C102]
gi|284797584|gb|EFC52931.1| protein YebC [Neisseria subflava NJ9703]
gi|317400997|gb|EFV81652.1| hypothetical protein HMPREF0604_00231 [Neisseria mucosa C102]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|296315222|ref|ZP_06865163.1| protein YebC [Neisseria polysaccharea ATCC 43768]
gi|385855668|ref|YP_005902181.1| hypothetical protein NMBM01240355_1567 [Neisseria meningitidis
M01-240355]
gi|421555334|ref|ZP_16001268.1| hypothetical protein NMEN98008_1593 [Neisseria meningitidis 98008]
gi|422110969|ref|ZP_16380794.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|296837859|gb|EFH21797.1| protein YebC [Neisseria polysaccharea ATCC 43768]
gi|309378379|emb|CBX22980.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|325204609|gb|ADZ00063.1| hypothetical protein NMBM01240355_1567 [Neisseria meningitidis
M01-240355]
gi|402330848|gb|EJU66192.1| hypothetical protein NMEN98008_1593 [Neisseria meningitidis 98008]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|261379116|ref|ZP_05983689.1| protein YebC [Neisseria cinerea ATCC 14685]
gi|269144438|gb|EEZ70856.1| protein YebC [Neisseria cinerea ATCC 14685]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|16272269|ref|NP_438481.1| hypothetical protein HI0315 [Haemophilus influenzae Rd KW20]
gi|68248922|ref|YP_248034.1| hypothetical protein NTHI0433 [Haemophilus influenzae 86-028NP]
gi|145628665|ref|ZP_01784465.1| Holliday junction resolvase [Haemophilus influenzae 22.1-21]
gi|145632566|ref|ZP_01788300.1| hypothetical protein CGSHi3655_02089 [Haemophilus influenzae 3655]
gi|145638772|ref|ZP_01794381.1| dATP pyrophosphohydrolase [Haemophilus influenzae PittII]
gi|145640259|ref|ZP_01795843.1| hypothetical protein CGSHiR3021_09380 [Haemophilus influenzae
R3021]
gi|148825406|ref|YP_001290159.1| hypothetical protein CGSHiEE_01480 [Haemophilus influenzae PittEE]
gi|148827467|ref|YP_001292220.1| hypothetical protein CGSHiGG_04390 [Haemophilus influenzae PittGG]
gi|229846403|ref|ZP_04466511.1| hypothetical protein CGSHi7P49H1_07020 [Haemophilus influenzae
7P49H1]
gi|260581217|ref|ZP_05849036.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|319896647|ref|YP_004134840.1| hypothetical protein HIBPF02590 [Haemophilus influenzae F3031]
gi|378696505|ref|YP_005178463.1| hypothetical protein HIB_04330 [Haemophilus influenzae 10810]
gi|386265289|ref|YP_005828781.1| hypothetical protein R2846_0265 [Haemophilus influenzae R2846]
gi|1175837|sp|P44634.1|Y315_HAEIN RecName: Full=Probable transcriptional regulatory protein HI_0315
gi|81336667|sp|Q4QNM3.1|Y433_HAEI8 RecName: Full=Probable transcriptional regulatory protein NTHI0433
gi|166227256|sp|A5UGD1.1|Y4390_HAEIG RecName: Full=Probable transcriptional regulatory protein
CGSHiGG_04390
gi|166231382|sp|A5UAH5.1|Y1480_HAEIE RecName: Full=Probable transcriptional regulatory protein
CGSHiEE_01480
gi|1573285|gb|AAC21979.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|68057121|gb|AAX87374.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144979135|gb|EDJ88821.1| Holliday junction resolvase [Haemophilus influenzae 22.1-21]
gi|144986761|gb|EDJ93313.1| hypothetical protein CGSHi3655_02089 [Haemophilus influenzae 3655]
gi|145272367|gb|EDK12275.1| dATP pyrophosphohydrolase [Haemophilus influenzae PittII]
gi|145274845|gb|EDK14707.1| hypothetical protein CGSHiR3021_09380 [Haemophilus influenzae
22.4-21]
gi|148715566|gb|ABQ97776.1| hypothetical protein CGSHiEE_01480 [Haemophilus influenzae PittEE]
gi|148718709|gb|ABQ99836.1| hypothetical protein CGSHiGG_04390 [Haemophilus influenzae PittGG]
gi|229810496|gb|EEP46214.1| hypothetical protein CGSHi7P49H1_07020 [Haemophilus influenzae
7P49H1]
gi|260092142|gb|EEW76086.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|301169024|emb|CBW28621.1| conserved protein [Haemophilus influenzae 10810]
gi|309750262|gb|ADO80246.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
gi|309972525|gb|ADO95726.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
gi|317432149|emb|CBY80500.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|241759107|ref|ZP_04757217.1| conserved hypothetical protein [Neisseria flavescens SK114]
gi|241320634|gb|EER56898.1| conserved hypothetical protein [Neisseria flavescens SK114]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|217967996|ref|YP_002353502.1| hypothetical protein Dtur_1615 [Dictyoglomus turgidum DSM 6724]
gi|226734745|sp|B8E2P4.1|Y1615_DICTD RecName: Full=Probable transcriptional regulatory protein
Dtur_1615
gi|217337095|gb|ACK42888.1| protein of unknown function DUF28 [Dictyoglomus turgidum DSM
6724]
Length = 249
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H KAA D +K LF+ LSK++ +A K GGG +P TN RL + I+ ++++
Sbjct: 2 SGHSKWANIKHRKAAADAKKGKLFSQLSKEIIIAAKHGGG-NPETNPRLRAAIERAREAN 60
Query: 88 MPMTTIENAI 97
MP IE AI
Sbjct: 61 MPKENIEKAI 70
>gi|373467471|ref|ZP_09558768.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus sp.
oral taxon 851 str. F0397]
gi|371758672|gb|EHO47435.1| DNA-binding regulatory protein, YebC/PmpR family [Haemophilus sp.
oral taxon 851 str. F0397]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVGANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|357419872|ref|YP_004932864.1| hypothetical protein Tlie_1034 [Thermovirga lienii DSM 17291]
gi|355397338|gb|AER66767.1| protein of unknown function DUF28 [Thermovirga lienii DSM 17291]
Length = 250
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D +K F + + +A +E GG DP N RL + ++ + ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKKGREFQKHIRAIMVAARE-GGADPALNIRLKAALERARAAN 60
Query: 88 MPMTTIENAIK 98
+P IE AIK
Sbjct: 61 VPNDNIEKAIK 71
>gi|261365817|ref|ZP_05978700.1| protein YebC [Neisseria mucosa ATCC 25996]
gi|288565625|gb|EFC87185.1| protein YebC [Neisseria mucosa ATCC 25996]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|59801645|ref|YP_208357.1| hypothetical protein NGO1291 [Neisseria gonorrhoeae FA 1090]
gi|240014539|ref|ZP_04721452.1| hypothetical protein NgonD_07819 [Neisseria gonorrhoeae DGI18]
gi|240121061|ref|ZP_04734023.1| hypothetical protein NgonPI_04689 [Neisseria gonorrhoeae PID24-1]
gi|254494085|ref|ZP_05107256.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268597527|ref|ZP_06131694.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268604057|ref|ZP_06138224.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268682516|ref|ZP_06149378.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268686958|ref|ZP_06153820.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|291043418|ref|ZP_06569139.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293398720|ref|ZP_06642896.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
gi|67462013|sp|Q5F792.1|Y1291_NEIG1 RecName: Full=Probable transcriptional regulatory protein NGO1291
gi|59718540|gb|AAW89945.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|226513125|gb|EEH62470.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268551315|gb|EEZ46334.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268588188|gb|EEZ52864.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268622800|gb|EEZ55200.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268627242|gb|EEZ59642.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|291012654|gb|EFE04639.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291610860|gb|EFF39959.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|421565971|ref|ZP_16011735.1| hypothetical protein NMEN3081_1774 [Neisseria meningitidis NM3081]
gi|402342364|gb|EJU77531.1| hypothetical protein NMEN3081_1774 [Neisseria meningitidis NM3081]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|303249143|ref|ZP_07335383.1| protein of unknown function DUF28 [Desulfovibrio fructosovorans
JJ]
gi|302489468|gb|EFL49415.1| protein of unknown function DUF28 [Desulfovibrio fructosovorans
JJ]
Length = 245
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K+ +D +K+ FT ++K+L LA + GG D N RL S I K +
Sbjct: 2 AGHSKWHNIQARKSVQDAKKSKFFTKVTKELMLAAR-AGGADTALNTRLKSAIAAAKAVN 60
Query: 88 MPMTTIENAIK 98
+P IE AIK
Sbjct: 61 LPKDKIEQAIK 71
>gi|145634686|ref|ZP_01790395.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA]
gi|260582587|ref|ZP_05850377.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127]
gi|145268231|gb|EDK08226.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA]
gi|260094398|gb|EEW78296.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D + N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVSANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|406920198|gb|EKD58302.1| hypothetical protein ACD_56C00150G0001 [uncultured bacterium]
Length = 238
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHS W I+ K D ++A +FT + + +A KEGGG P N++L ID + +
Sbjct: 2 SGHSHWAGIKQRKGVNDAKRANVFTKYGRLITIAAKEGGGK-PEMNFKLKMAIDQARYVN 60
Query: 88 MPMTTIENAIK--------SCNVPENIY-GY 109
MP TIE AIK ++ E IY GY
Sbjct: 61 MPKETIERAIKKGTGELKDGADIEEIIYEGY 91
>gi|28211819|ref|NP_782763.1| hypothetical protein CTC02215 [Clostridium tetani E88]
gi|33517010|sp|Q891Z5.1|Y2215_CLOTE RecName: Full=Probable transcriptional regulatory protein CTC_02215
gi|28204261|gb|AAO36700.1| glucose-1-phosphate adenylyltransferase [Clostridium tetani E88]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++ +FT + ++L +A KE GG++P+TN +L I + ++
Sbjct: 2 SGHSKWHNIQAKKGKMDAKRGKIFTKIGRELIIASKE-GGSNPDTNSKLRDVIAKARANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVS 128
MP TI AIK Y E++ + P +A +VS
Sbjct: 61 MPQDTISRAIKKGAGELEGVNYEEMTYEGYGPN-GVAFVVS 100
>gi|302875045|ref|YP_003843678.1| hypothetical protein Clocel_2171 [Clostridium cellulovorans 743B]
gi|307690336|ref|ZP_07632782.1| hypothetical protein Ccel74_19436 [Clostridium cellulovorans
743B]
gi|302577902|gb|ADL51914.1| protein of unknown function DUF28 [Clostridium cellulovorans
743B]
Length = 245
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++ +FT L K++ +A K GG++P+TN +L I K ++
Sbjct: 2 SGHSKWHNIQAKKGKADAKRGKIFTKLGKEIMVAAK--GGSNPDTNAKLRDVIAKAKAAN 59
Query: 88 MPMTTIENAIK 98
MP TI A+K
Sbjct: 60 MPADTISRAVK 70
>gi|240016985|ref|ZP_04723525.1| hypothetical protein NgonFA_07427 [Neisseria gonorrhoeae FA6140]
gi|268601724|ref|ZP_06135891.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268585855|gb|EEZ50531.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|170757190|ref|YP_001782708.1| hypothetical protein CLD_1467 [Clostridium botulinum B1 str. Okra]
gi|429246554|ref|ZP_19209872.1| hypothetical protein CFSAN001628_015843 [Clostridium botulinum
CFSAN001628]
gi|226734179|sp|B1IMF6.1|Y1467_CLOBK RecName: Full=Probable transcriptional regulatory protein CLD_1467
gi|169122402|gb|ACA46238.1| conserved hypothetical protein TIGR01033 [Clostridium botulinum B1
str. Okra]
gi|428756470|gb|EKX79024.1| hypothetical protein CFSAN001628_015843 [Clostridium botulinum
CFSAN001628]
Length = 246
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++ +FT + K++ +AVK+GG + ++N RL I K ++
Sbjct: 2 SGHSKWHNIQAKKGKADAKRGKIFTKIGKEIVVAVKQGGPS-ADSNPRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP TIE +IK + N Y ++ + P IA LV +
Sbjct: 61 MPNDTIERSIKKASGELNAVDYETITYEGYGPA-GIAVLVDV 101
>gi|334337150|ref|YP_004542302.1| hypothetical protein Isova_1656 [Isoptericola variabilis 225]
gi|334107518|gb|AEG44408.1| UPF0082 protein yeeN [Isoptericola variabilis 225]
Length = 252
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GGG DP N L I KKSS
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEVAARTGGG-DPAGNPTLFDAIQKAKKSS 60
Query: 88 MPMTTIENAIK 98
+P IE A+K
Sbjct: 61 VPNDNIERAVK 71
>gi|418752288|ref|ZP_13308557.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
santarosai str. MOR084]
gi|409967357|gb|EKO35185.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
santarosai str. MOR084]
gi|456873375|gb|EMF88750.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
santarosai str. ST188]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AI+ G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIRK--------GTGELEGIVYEECL--YECFGPAGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|359684785|ref|ZP_09254786.1| hypothetical protein Lsan2_09009 [Leptospira santarosai str.
2000030832]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AI+ G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIRK--------GTGELEGIVYEECL--YECFGPAGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|254367572|ref|ZP_04983596.1| hypothetical protein FTHG_00834 [Francisella tularensis subsp.
holarctica 257]
gi|134253386|gb|EBA52480.1| hypothetical protein FTHG_00834 [Francisella tularensis subsp.
holarctica 257]
Length = 221
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L +++ +A + GGG D + N RL + I ++
Sbjct: 2 AGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGG-DKDANPRLRAAIATALANN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY 109
M TIE AI +S NV E Y GY
Sbjct: 61 MSKDTIERAIVKGAGGDESANVEEVRYEGY 90
>gi|386855531|ref|YP_006259708.1| hypothetical protein DGo_CA0323 [Deinococcus gobiensis I-0]
gi|379999060|gb|AFD24250.1| UPF0082 protein [Deinococcus gobiensis I-0]
Length = 244
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ K A D++++ +++ + ++ AV+ GG DP N L + I K +
Sbjct: 2 AGHSKWAQIKRKKGANDKKRSAMYSKHIRAIQAAVRSGGSGDPAGNLSLKNAIAAAKTDT 61
Query: 88 MPMTTIENAIK-SCNVPENIYGYLELSCLPWKP 119
+P IENAIK + E Y E++ + P
Sbjct: 62 VPADNIENAIKRAVGAGEGAAEYKEVTYEGYGP 94
>gi|417840041|ref|ZP_12486197.1| UPF0082 protein [Haemophilus haemolyticus M19107]
gi|341950508|gb|EGT77096.1| UPF0082 protein [Haemophilus haemolyticus M19107]
Length = 246
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVTANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY------LELSCLPWKPTLSIARL 126
M TI AI N+ IY GY + + CL +I+++
Sbjct: 61 MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQV 113
>gi|269792535|ref|YP_003317439.1| hypothetical protein [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100170|gb|ACZ19157.1| protein of unknown function DUF28 [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 250
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D +K ++ L++ + A K GG DPN N+RL I+ + +
Sbjct: 2 AGHSKWANIKHRKAAQDAKKGAVYQRLTRAIIAAAKA-GGGDPNANFRLKVAIERARAGN 60
Query: 88 MPMTTIENAIK 98
+PM IE AIK
Sbjct: 61 VPMDNIERAIK 71
>gi|406942523|gb|EKD74739.1| hypothetical protein ACD_44C00350G0012 [uncultured bacterium]
Length = 238
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ ++ +GG D TN RL + +D ++
Sbjct: 2 AGHSKWANIQHRKNAQDAKRGKLFTKLIREITVSASQGGA-DTATNPRLRTAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTRDTVERAIK 71
>gi|406905387|gb|EKD46864.1| hypothetical protein ACD_67C00036G0002 [uncultured bacterium]
Length = 238
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHS W I+ K D ++A +FT + + +A KEGGG P N++L ID + +
Sbjct: 2 SGHSHWAGIKQRKGVNDAKRANVFTKYGRLITIAAKEGGGK-PEMNFKLQMAIDRARLEN 60
Query: 88 MPMTTIENAIK 98
MP TIE AIK
Sbjct: 61 MPKDTIERAIK 71
>gi|386286101|ref|ZP_10063303.1| hypothetical protein DOK_01899 [gamma proteobacterium BDW918]
gi|385280923|gb|EIF44833.1| hypothetical protein DOK_01899 [gamma proteobacterium BDW918]
Length = 248
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L +++ +A K GG T P N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAGQDAKRGKIFTKLIREIVVAAKAGGPT-PEDNPRLRAVVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELS 113
M TI+ AI + Y E+S
Sbjct: 61 MKRDTIDKAIARGAGNADSDNYDEVS 86
>gi|347757941|ref|YP_004865503.1| hypothetical protein MICA_1178 [Micavibrio aeruginosavorus ARL-13]
gi|347590459|gb|AEP09501.1| conserved hypothetical protein [Micavibrio aeruginosavorus ARL-13]
Length = 250
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS+++NI H K +D ++A +FT + +++ +AVK GGG+DP N RL + + + ++ +
Sbjct: 2 AGHSQFKNIMHRKGRQDAKRAKVFTKIGREIIVAVK-GGGSDPGANPRLRAAMLWAREEN 60
Query: 88 MPMTTIENAIKSC 100
MP I+ AI S
Sbjct: 61 MPNDRIKRAIDSA 73
>gi|428224357|ref|YP_007108454.1| hypothetical protein GEI7407_0904 [Geitlerinema sp. PCC 7407]
gi|427984258|gb|AFY65402.1| protein of unknown function DUF28 [Geitlerinema sp. PCC 7407]
Length = 256
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +KAT+FT +S+++ +A + G DP+ N++L + I+ K +
Sbjct: 2 AGHSKWANIKRQKARVDAKKATVFTKISREIIVAARS-GLPDPDGNFQLRTAIEKAKAAG 60
Query: 88 MPMTTIENAI 97
+P IE AI
Sbjct: 61 IPNDNIERAI 70
>gi|42518829|ref|NP_964759.1| hypothetical protein LJ0904 [Lactobacillus johnsonii NCC 533]
gi|227889668|ref|ZP_04007473.1| protein of hypothetical function DUF28 [Lactobacillus johnsonii
ATCC 33200]
gi|268319775|ref|YP_003293431.1| hypothetical protein FI9785_1304 [Lactobacillus johnsonii FI9785]
gi|385826178|ref|YP_005862520.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|417837868|ref|ZP_12484106.1| hypothetical protein PF01_00971 [Lactobacillus johnsonii pf01]
gi|49036509|sp|P62037.1|Y904_LACJO RecName: Full=Probable transcriptional regulatory protein LJ_0904
gi|41583115|gb|AAS08725.1| hypothetical protein LJ_0904 [Lactobacillus johnsonii NCC 533]
gi|227849811|gb|EEJ59897.1| protein of hypothetical function DUF28 [Lactobacillus johnsonii
ATCC 33200]
gi|262398150|emb|CAX67164.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
gi|329667622|gb|AEB93570.1| hypothetical protein LJP_1248c [Lactobacillus johnsonii DPC 6026]
gi|338761411|gb|EGP12680.1| hypothetical protein PF01_00971 [Lactobacillus johnsonii pf01]
Length = 243
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D + ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-SGGPDPSGNPTLRMVMDKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP T IE AIK + + Y E++ + P G A LV A++
Sbjct: 61 MPKTNIERAIKKAEGNSDEH-YDEITYEGYAPG----------GVAVLVEALT 102
>gi|116629905|ref|YP_815077.1| hypothetical protein LGAS_1276 [Lactobacillus gasseri ATCC 33323]
gi|238853649|ref|ZP_04644017.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282851506|ref|ZP_06260871.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
gasseri 224-1]
gi|311110459|ref|ZP_07711856.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
gi|420148474|ref|ZP_14655742.1| Putative transcriptional regulatory protein [Lactobacillus gasseri
CECT 5714]
gi|122273157|sp|Q042I3.1|Y1276_LACGA RecName: Full=Probable transcriptional regulatory protein LGAS_1276
gi|116095487|gb|ABJ60639.1| hypothetical protein LGAS_1276 [Lactobacillus gasseri ATCC 33323]
gi|238833687|gb|EEQ25956.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282557474|gb|EFB63071.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
gasseri 224-1]
gi|311065613|gb|EFQ45953.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
gi|398400026|gb|EJN53622.1| Putative transcriptional regulatory protein [Lactobacillus gasseri
CECT 5714]
Length = 243
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D + ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-SGGPDPSGNPTLRMVMDKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP T IE AIK + + Y E++ + P G A LV A++
Sbjct: 61 MPKTNIERAIKKAEGNSDEH-YDEITYEGYAPG----------GVAVLVEALT 102
>gi|410451243|ref|ZP_11305261.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira sp.
Fiocruz LV3954]
gi|418745315|ref|ZP_13301655.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
santarosai str. CBC379]
gi|421110322|ref|ZP_15570821.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
santarosai str. JET]
gi|410015020|gb|EKO77134.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira sp.
Fiocruz LV3954]
gi|410793777|gb|EKR91692.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
santarosai str. CBC379]
gi|410804311|gb|EKS10430.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
santarosai str. JET]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AI+ G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAIRK--------GTGELEGIVYEECL--YECFGPAGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|408417804|ref|YP_006759218.1| hypothetical protein TOL2_C03440 [Desulfobacula toluolica Tol2]
gi|405105017|emb|CCK78514.1| conserved uncharacterized protein [Desulfobacula toluolica Tol2]
Length = 247
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K A D ++ LFT L K++ +A + GGG DP N RL + + +
Sbjct: 2 SGHSKWSTIKHKKGATDAKRGKLFTKLIKEITVAARMGGG-DPEANPRLRHALSIARSQN 60
Query: 88 MPMTTIENAIK 98
MP T E A+K
Sbjct: 61 MPKDTSERAVK 71
>gi|358062982|ref|ZP_09149611.1| hypothetical protein HMPREF9473_01673 [Clostridium hathewayi
WAL-18680]
gi|356698845|gb|EHI60376.1| hypothetical protein HMPREF9473_01673 [Clostridium hathewayi
WAL-18680]
Length = 242
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + +++ +AVKE GG DP N +L I K ++
Sbjct: 2 SGHSKFANIKHKKERNDAAKGKVFTVIGREIAVAVKE-GGADPANNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ IK N Y L+ + P G A +V ++ + +
Sbjct: 61 MPNDTIDRGIKKAAGDANSVNYEVLTYEGYGPN----------GVAIIVDTLTDNKNRTA 110
Query: 148 ANFIS 152
AN S
Sbjct: 111 ANVRS 115
>gi|414084375|ref|YP_006993083.1| hypothetical protein BN424_2328 [Carnobacterium maltaromaticum
LMA28]
gi|412997959|emb|CCO11768.1| conserved hypothetical protein [Carnobacterium maltaromaticum
LMA28]
Length = 241
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F +S+++ +AVK GG DP+TN +L +D K ++
Sbjct: 2 SGHSKWSNIQGRKNAQDTKRGQIFQKISREIYMAVK-SGGPDPSTNPQLRMMMDKAKSAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLV 127
MP ++ AI + Y E++ + P IA LV
Sbjct: 61 MPNDNVKRAIAKGSQSGEGENYEEITYEGYGPN-GIAVLV 99
>gi|406835282|ref|ZP_11094876.1| hypothetical protein SpalD1_26688 [Schlesneria paludicola DSM
18645]
Length = 281
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS W NI K D+++ LF L++ + +A + GGG DP N L ID KK+S
Sbjct: 32 AGHSHWANIAFKKGLVDKKRGKLFGKLARYIIVAARRGGG-DPAANLALRYAIDRAKKAS 90
Query: 88 MPMTTIENAIK 98
MP TIE A+K
Sbjct: 91 MPNDTIERAVK 101
>gi|387889626|ref|YP_006319924.1| hypothetical protein EBL_c23240 [Escherichia blattae DSM 4481]
gi|414593095|ref|ZP_11442743.1| hypothetical protein YeeN [Escherichia blattae NBRC 105725]
gi|386924459|gb|AFJ47413.1| hypothetical protein EBL_c23240 [Escherichia blattae DSM 4481]
gi|403195928|dbj|GAB80395.1| hypothetical protein YeeN [Escherichia blattae NBRC 105725]
Length = 248
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N RH KAA+D ++ +FT + ++L A + GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAARLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|359728331|ref|ZP_09267027.1| hypothetical protein Lwei2_16019 [Leptospira weilii str.
2006001855]
gi|417778541|ref|ZP_12426346.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira weilii
str. 2006001853]
gi|410781334|gb|EKR65908.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira weilii
str. 2006001853]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE AIK ++ G + CL G A +VSA++ + R
Sbjct: 61 MPKDNIERAIKKGT--GDLEGVVYEECL--------YECFGSGGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|359781355|ref|ZP_09284579.1| hypothetical protein PPL19_09867 [Pseudomonas psychrotolerans L19]
gi|359370419|gb|EHK70986.1| hypothetical protein PPL19_09867 [Pseudomonas psychrotolerans L19]
Length = 248
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 17/124 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +K +FT + ++L +A ++GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKKGKIFTKIIRELTVAARQGGGV-PADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIK---SCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRF 144
M TI+ AI EN+ EL+ + P+ G A +V AM+ R
Sbjct: 61 MTRDTIDRAIARGVGAGEGENVE---ELTYEGYAPS----------GVAIIVEAMTDNRN 107
Query: 145 PPSA 148
+A
Sbjct: 108 RTAA 111
>gi|304440194|ref|ZP_07400084.1| glucose-1-phosphate adenylyltransferase [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371243|gb|EFM24859.1| glucose-1-phosphate adenylyltransferase [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 246
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI++ K +D + +FT L + + +A KE GG DP N L ID K +
Sbjct: 2 SGHSKWNNIKNKKGKEDARRGKIFTKLGRYIMVAAKE-GGPDPEYNASLKVAIDKAKAEN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPNDNIERAIK 71
>gi|294056004|ref|YP_003549662.1| hypothetical protein [Coraliomargarita akajimensis DSM 45221]
gi|293615337|gb|ADE55492.1| protein of unknown function DUF28 [Coraliomargarita akajimensis
DSM 45221]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ LF+ LSK + LA + GGG DP N RL + I K ++
Sbjct: 2 SGHSKWATIKRAKGAADAKRGKLFSVLSKDITLAARSGGG-DPGFNPRLRTCILKAKAAN 60
Query: 88 MPMTTIENAIK 98
MP I+ AIK
Sbjct: 61 MPADNIDRAIK 71
>gi|241895679|ref|ZP_04782975.1| protein of hypothetical function DUF28 [Weissella paramesenteroides
ATCC 33313]
gi|241871046|gb|EER74797.1| protein of hypothetical function DUF28 [Weissella paramesenteroides
ATCC 33313]
Length = 240
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F L++ L A K GG DP++N L ID K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKIFQKLARDLYTAAK-AGGVDPDSNSSLRLVIDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP I+ A+ + N Y EL+ + P G A LV A++
Sbjct: 61 MPKDNIQRALDKASGA-NGANYQELTYEGYGPA----------GIAVLVEALT 102
>gi|392421992|ref|YP_006458596.1| hypothetical protein A458_14720 [Pseudomonas stutzeri CCUG 29243]
gi|390984180|gb|AFM34173.1| hypothetical protein A458_14720 [Pseudomonas stutzeri CCUG 29243]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L ++L +A K GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKRGKIFTKLIRELTVAAKHGGGV-PADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M I+ AI ELS + P+ G A ++ AM+ R
Sbjct: 61 MSRDVIDRAIARGAGSSEADNMTELSYEGYAPS----------GVAIIIEAMTDNR 106
>gi|254468275|ref|ZP_05081681.1| conserved hypothetical protein TIGR01033 [beta proteobacterium
KB13]
gi|207087085|gb|EDZ64368.1| conserved hypothetical protein TIGR01033 [beta proteobacterium
KB13]
Length = 241
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L K++ ++ + GG DPN N RL + I K +
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGKIFTKLIKEITVSARMSGG-DPNFNPRLRAAIAAAKDEN 60
Query: 88 MPMTTIENAIK 98
MP I AIK
Sbjct: 61 MPAENITRAIK 71
>gi|374708717|ref|ZP_09713151.1| hypothetical protein SinuC_00760 [Sporolactobacillus inulinus CASD]
Length = 243
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+H K A D + +F LSK + L + GGG DP+ N L I+ K ++
Sbjct: 2 SGHSKWNNIQHKKNAVDAARGKIFMRLSKDIFLEARHGGG-DPSMNSGLRHAIEKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I AIK + Y E++ + P
Sbjct: 61 MPNDNISRAIKKATGDLDGVTYEEITYEGYGP 92
>gi|300361336|ref|ZP_07057513.1| glucose-1-phosphate adenylyltransferase [Lactobacillus gasseri
JV-V03]
gi|300353955|gb|EFJ69826.1| glucose-1-phosphate adenylyltransferase [Lactobacillus gasseri
JV-V03]
Length = 243
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D + ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-SGGPDPSGNPTLRMVMDKARAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP T IE AIK + + Y E++ + P G A LV A++
Sbjct: 61 MPKTNIERAIKKAEGNSDEH-YDEITYEGYAPG----------GVAVLVEALT 102
>gi|167957416|ref|ZP_02544490.1| hypothetical protein cdiviTM7_02035 [candidate division TM7
single-cell isolate TM7c]
gi|169836840|ref|ZP_02870028.1| hypothetical protein cdivTM_06994 [candidate division TM7
single-cell isolate TM7a]
Length = 239
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ K A D ++ +FT + K++ +A ++ GTDP+ N LA I+ K ++
Sbjct: 2 AGHSKWAKIKRDKGANDAKRGAIFTRIGKQIAIAARK--GTDPSMNPALALAIEKAKAAN 59
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP + I+ AI N +N E++ + P
Sbjct: 60 MPNSNIQRAIDRVN-DKNAAALEEITYEAYGP 90
>gi|126735109|ref|ZP_01750855.1| hypothetical protein RCCS2_14569 [Roseobacter sp. CCS2]
gi|126715664|gb|EBA12529.1| hypothetical protein RCCS2_14569 [Roseobacter sp. CCS2]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ ++ LF+ L+K++ +A K G DP+ N RL + K SS
Sbjct: 2 AGHSKWANIQHRKGRQDKLRSKLFSKLAKEITVAAK-MGDPDPDKNPRLRLAVKEAKSSS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
+P I+ AIK + Y E+ + P G A +V AM+ R
Sbjct: 61 VPKDVIDRAIKKSQGG-DAENYDEIRYEGYGPN----------GVAVIVEAMTDNR 105
>gi|315640546|ref|ZP_07895654.1| glucose-1-phosphate adenylyltransferase [Enterococcus italicus DSM
15952]
gi|315483750|gb|EFU74238.1| glucose-1-phosphate adenylyltransferase [Enterococcus italicus DSM
15952]
Length = 240
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GGG + + N L ID K ++
Sbjct: 2 SGHSKWNNIQGRKNAQDAKRGKIFQKLSREIYIAAKAGGG-EVSMNPGLRLVIDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP IE AIK Y EL+ + P G A LV A++ R
Sbjct: 61 MPNDNIERAIKKATSGIEGSNYEELTYEGYGPN----------GVAILVEALTDNRNRTQ 110
Query: 148 AN 149
N
Sbjct: 111 TN 112
>gi|402216739|gb|EJT96823.1| YebC-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 25 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCK 84
+R +GHSKW I+H KA +D +KA L+ ++ ++ +A ++GG DP N L + K
Sbjct: 24 IRQSGHSKWSKIKHGKAIQDAQKANLYNRMASEIVIAARKGGSPDPALNVSLQLILAKAK 83
Query: 85 KSSMPMTTIENAIK 98
+ +P IE+A+K
Sbjct: 84 RLGVPRDNIESALK 97
>gi|282896803|ref|ZP_06304809.1| Protein of unknown function DUF28 [Raphidiopsis brookii D9]
gi|281198212|gb|EFA73102.1| Protein of unknown function DUF28 [Raphidiopsis brookii D9]
Length = 252
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +K ++FT LS+ + +A K G DP N++L + ID K +
Sbjct: 2 AGHSKWANIKRQKAVVDAKKGSVFTQLSRAIIIAAK-NGIPDPTGNFQLRTAIDKAKAAG 60
Query: 88 MPMTTIENAI 97
+P IE AI
Sbjct: 61 IPNDNIERAI 70
>gi|121594258|ref|YP_986154.1| hypothetical protein Ajs_1898 [Acidovorax sp. JS42]
gi|222110896|ref|YP_002553160.1| hypothetical protein Dtpsy_1703 [Acidovorax ebreus TPSY]
gi|166227483|sp|A1W753.1|Y1898_ACISJ RecName: Full=Probable transcriptional regulatory protein Ajs_1898
gi|120606338|gb|ABM42078.1| protein of unknown function DUF28 [Acidovorax sp. JS42]
gi|221730340|gb|ACM33160.1| protein of unknown function DUF28 [Acidovorax ebreus TPSY]
Length = 239
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 15/119 (12%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T + +++ +A + GGG DP+ N RL ID K ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARTGGG-DPSANPRLRLAIDKAKAAN 60
Query: 88 MPMTTIE-NAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
MP I+ N K+ E + Y E+ + + G+A +V M+ RVR
Sbjct: 61 MPADRIKYNIDKASGTLEGV-SYEEIRYEGY----------GIGGAAIIVDTMTDNRVR 108
>gi|332528320|ref|ZP_08404320.1| hypothetical protein HGR_00425 [Hylemonella gracilis ATCC 19624]
gi|332042191|gb|EGI78517.1| hypothetical protein HGR_00425 [Hylemonella gracilis ATCC 19624]
Length = 239
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+++ ++T + +++ +A + GGG DP+ N RL ID K ++
Sbjct: 2 AGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARAGGG-DPSANPRLRLAIDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
MP ++ I + Y E+ + + G+A +V M+ RVR
Sbjct: 61 MPADRVKYNIDKATGNQEGVNYEEIRYEGY----------GIGGAAIIVDTMTDNRVR 108
>gi|282900371|ref|ZP_06308321.1| protein of unknown function DUF28 [Cylindrospermopsis raciborskii
CS-505]
gi|281194684|gb|EFA69631.1| protein of unknown function DUF28 [Cylindrospermopsis raciborskii
CS-505]
Length = 252
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +K ++FT LS+ + +A K G DP N++L + ID K +
Sbjct: 2 AGHSKWANIKRQKAVVDAKKGSVFTQLSRAIIIAAK-NGIPDPTGNFQLRTAIDKAKAAG 60
Query: 88 MPMTTIENAI 97
+P IE AI
Sbjct: 61 IPNDNIERAI 70
>gi|90580114|ref|ZP_01235922.1| hypothetical protein VAS14_18051 [Photobacterium angustum S14]
gi|90438999|gb|EAS64182.1| hypothetical protein VAS14_18051 [Photobacterium angustum S14]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK+ NI+H KAA+D ++ +FT L +++ +A KE GG++P N RL + ID ++
Sbjct: 2 AGHSKFANIKHRKAAQDAKRGKIFTKLIREITVAAKE-GGSEPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M TI A+
Sbjct: 61 MTRDTINRAV 70
>gi|336325692|ref|YP_004605658.1| hypothetical protein CRES_1138 [Corynebacterium resistens DSM
45100]
gi|336101674|gb|AEI09494.1| hypothetical protein CRES_1138 [Corynebacterium resistens DSM
45100]
Length = 250
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW +H KAA D ++ F L K +++A + GGG DP+ N L I KKSS
Sbjct: 2 AGHSKWATTKHKKAANDAKRGKEFAKLIKNIEVAARTGGG-DPSANPTLQDAITKAKKSS 60
Query: 88 MPMTTIENAIK 98
+P I+ A+K
Sbjct: 61 VPNDNIDRAVK 71
>gi|149194291|ref|ZP_01871388.1| hypothetical protein CMTB2_06816 [Caminibacter mediatlanticus TB-2]
gi|149135466|gb|EDM23945.1| hypothetical protein CMTB2_06816 [Caminibacter mediatlanticus TB-2]
Length = 238
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++HIKA +D +K+ +FT + + A ++GGG +P+ N L I+ K S
Sbjct: 2 AGHNKWSKVKHIKAKEDAKKSKIFTKHVRAIMTAARQGGG-NPDNNPALRLAIERAKADS 60
Query: 88 MPMTTIENAIKSC 100
MPM I+ AI
Sbjct: 61 MPMQNIQRAIDKA 73
>gi|431926644|ref|YP_007239678.1| YebC/PmpR family DNA-binding regulatory protein [Pseudomonas
stutzeri RCH2]
gi|431824931|gb|AGA86048.1| DNA-binding regulatory protein, YebC/PmpR family [Pseudomonas
stutzeri RCH2]
Length = 249
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L ++L +A K GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKRGKIFTKLIRELTVAAKHGGGV-PADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M I+ AI ELS + P+ G A ++ AM+ R
Sbjct: 61 MSRDVIDRAIARGAGSSEADNMTELSYEGYAPS----------GVAIIIEAMTDNR 106
>gi|67459191|ref|YP_246815.1| hypothetical protein RF_0799 [Rickettsia felis URRWXCal2]
gi|75536377|sp|Q4ULC3.1|Y799_RICFE RecName: Full=Probable transcriptional regulatory protein RF_0799
gi|67004724|gb|AAY61650.1| unknown [Rickettsia felis URRWXCal2]
Length = 252
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ AVK G P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAVKTGSSNIPENNPRLRNALTAARSQN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S + N Y E+ + P G A +V A++
Sbjct: 62 LPKERIDKAINSAD-DANTENYTEIRYEGYAPN----------GIAIIVEALT 103
>gi|194099052|ref|YP_002002133.1| hypothetical protein NGK_1508 [Neisseria gonorrhoeae NCCP11945]
gi|226734673|sp|B4RMZ8.1|Y1508_NEIG2 RecName: Full=Probable transcriptional regulatory protein
NGK_1508
gi|193934342|gb|ACF30166.1| UPF0082 protein [Neisseria gonorrhoeae NCCP11945]
Length = 242
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIK 98
MP ++ AI
Sbjct: 61 MPKDNVQRAID 71
>gi|349574447|ref|ZP_08886397.1| YebC like protein [Neisseria shayeganii 871]
gi|348013993|gb|EGY52887.1| YebC like protein [Neisseria shayeganii 871]
Length = 242
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D ++ +FT L K++ +A + GGG DP +N RL +D ++
Sbjct: 2 AGHSKWANIQHKKARVDAKRGKIFTRLIKEITVAARLGGG-DPTSNPRLRLAMDKAWDAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVDYIEL 85
>gi|268595178|ref|ZP_06129345.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268684680|ref|ZP_06151542.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|385336069|ref|YP_005890016.1| hypothetical protein NGTW08_1185 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|268548567|gb|EEZ43985.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268624964|gb|EEZ57364.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|317164612|gb|ADV08153.1| hypothetical protein NGTW08_1185 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 242
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L K++ +A + GGG DP N RL ++ +++
Sbjct: 2 AGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGG-DPGANPRLRLALEKAAENN 60
Query: 88 MPMTTIENAIK 98
MP ++ AI
Sbjct: 61 MPKDNVQRAID 71
>gi|427704328|ref|YP_007047550.1| YebC/PmpR family DNA-binding regulatory protein [Cyanobium
gracile PCC 6307]
gi|427347496|gb|AFY30209.1| DNA-binding regulatory protein, YebC/PmpR family [Cyanobium
gracile PCC 6307]
Length = 258
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ KA D + LFT L +++ +A + GG DP N++L + I+ K +
Sbjct: 2 AGHSKWAQIKRTKAVVDARRGALFTRLGREITVAAR--GGADPAGNFQLRTAIEKAKVAG 59
Query: 88 MPMTTIENAI 97
+P IE A+
Sbjct: 60 LPNANIERAV 69
>gi|260587636|ref|ZP_05853549.1| glucose-1-phosphate adenylyltransferase [Blautia hansenii DSM
20583]
gi|331084074|ref|ZP_08333181.1| hypothetical protein HMPREF0992_02105 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541901|gb|EEX22470.1| glucose-1-phosphate adenylyltransferase [Blautia hansenii DSM
20583]
gi|330402436|gb|EGG82006.1| hypothetical protein HMPREF0992_02105 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 242
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D +K +FT + +++ +AVKE GG DP N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAKKGKIFTVIGREIVVAVKE-GGPDPANNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPT 120
MP TIE IK N + L+ + P+
Sbjct: 61 MPNDTIERGIKKAAGDSNADNFEVLTYEGYGPS 93
>gi|225630084|ref|YP_002726875.1| hypothetical protein WRi_002620 [Wolbachia sp. wRi]
gi|254765053|sp|C0R5P2.1|Y2620_WOLWR RecName: Full=Probable transcriptional regulatory protein
WRi_002620
gi|225592065|gb|ACN95084.1| hypothetical protein WRi_002620 [Wolbachia sp. wRi]
Length = 246
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS++ NI+H K A+D +++ FT L +++ +A K+ G DP N RL S I +K +
Sbjct: 2 AGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQ-GLPDPELNPRLRSAIFAARKEN 60
Query: 88 MPMTTIENAIKSCNVPENIYG--YLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
+P IE AIK N N+ G Y E+ P+ G+A +V A++ R R
Sbjct: 61 LPKDKIETAIK--NATGNVAGENYEEIQYEGHGPS----------GTALIVHALTNNRNR 108
Query: 144 FPPSANFISNRLG 156
+I +R G
Sbjct: 109 TASEVRYIFSRKG 121
>gi|86608824|ref|YP_477586.1| hypothetical protein CYB_1350 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119391259|sp|Q2JLT1.1|Y1350_SYNJB RecName: Full=Probable transcriptional regulatory protein
CYB_1350
gi|86557366|gb|ABD02323.1| conserved hypothetical protein TIGR01033 [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 249
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +K +LFT LS+ + +A + G DP+ N++L + ++ K +
Sbjct: 2 AGHSKWANIKRQKARVDAKKGSLFTKLSRAIIVAAR-NGLPDPDGNFQLRAAVEKAKAAG 60
Query: 88 MPMTTIENAI 97
MP IE AI
Sbjct: 61 MPSENIERAI 70
>gi|198282208|ref|YP_002218529.1| hypothetical protein Lferr_0060 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218666356|ref|YP_002424573.1| hypothetical protein AFE_0059 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|416000561|ref|ZP_11560699.1| hypothetical protein GGI1_20463 [Acidithiobacillus sp. GGI-221]
gi|226734030|sp|B7J3G0.1|Y059_ACIF2 RecName: Full=Probable transcriptional regulatory protein AFE_0059
gi|226734031|sp|B5EJL6.1|Y060_ACIF5 RecName: Full=Probable transcriptional regulatory protein
Lferr_0060
gi|198246729|gb|ACH82322.1| protein of unknown function DUF28 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218518569|gb|ACK79155.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
gi|339835973|gb|EGQ63600.1| hypothetical protein GGI1_20463 [Acidithiobacillus sp. GGI-221]
Length = 250
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KA KD ++ +FT L +++ +A + GGG DP +N RL +D ++
Sbjct: 2 SGHSKWSTIKFKKALKDAKRGKIFTRLIREITVAARAGGG-DPASNSRLRLALDKAYGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
M TIE AIK Y E++ + P G A L+ M+ +VR
Sbjct: 61 MTKDTIERAIKRGTGELEGVDYEEVTYEGYGPG----------GVAILIETMTDNKVRTV 110
Query: 146 PSANFISNRLG 156
I ++ G
Sbjct: 111 AEVRHIFSKRG 121
>gi|384085949|ref|ZP_09997124.1| hypothetical protein AthiA1_10639 [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 250
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KA KD ++ +FT L +++ +A + GGG DP +N RL +D ++
Sbjct: 2 SGHSKWSTIKFKKALKDAKRGKIFTRLIREITVAARAGGG-DPGSNSRLRLALDKAYGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
M TIE A+K Y E++ + P G A L+ M+ +VR
Sbjct: 61 MTKDTIERAVKRGTGELEGVDYEEVTYEGYGPA----------GVAILIETMTDNKVRTV 110
Query: 146 PSANFISNRLG 156
I ++ G
Sbjct: 111 AEIRHIFSKRG 121
>gi|379011546|ref|YP_005269358.1| hypothetical protein Awo_c16870 [Acetobacterium woodii DSM 1030]
gi|375302335|gb|AFA48469.1| hypothetical protein T [Acetobacterium woodii DSM 1030]
Length = 245
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K D ++ +FT L+K + +A +E GG+DP+ N +L I K ++
Sbjct: 2 SGHSKWSTIKHKKGKADAKRGQIFTKLAKYIAVASRE-GGSDPDMNAKLKEAIIKAKAAN 60
Query: 88 MPMTTIENAIK 98
MP I+ AIK
Sbjct: 61 MPNDNIDRAIK 71
>gi|354617063|ref|ZP_09034572.1| UPF0082 protein yeeN [Saccharomonospora paurometabolica YIM 90007]
gi|353218584|gb|EHB83314.1| UPF0082 protein yeeN [Saccharomonospora paurometabolica YIM 90007]
Length = 249
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GGG DP N L I KK+S
Sbjct: 2 SGHSKWATTKHKKAALDAKRGKLFAKLVKNVEVAARTGGG-DPEANPTLYDAIQKAKKNS 60
Query: 88 MPMTTIENAIKSCNVPE 104
+P IE A + N E
Sbjct: 61 VPQDNIERARRRGNGEE 77
>gi|357635760|ref|ZP_09133638.1| protein of unknown function DUF28 [Desulfovibrio sp. FW1012B]
gi|357584314|gb|EHJ49647.1| protein of unknown function DUF28 [Desulfovibrio sp. FW1012B]
Length = 245
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K+ +D +K+ FT ++K+L LA K GG D N RL + I K +
Sbjct: 2 AGHSKWHNIQARKSVQDAKKSKFFTKVTKELMLATK-AGGADTALNNRLKTAIAAAKAVN 60
Query: 88 MPMTTIENAIK 98
+P IE AIK
Sbjct: 61 LPKDKIEQAIK 71
>gi|295425963|ref|ZP_06818638.1| glucose-1-phosphate adenylyltransferase [Lactobacillus amylolyticus
DSM 11664]
gi|295064346|gb|EFG55279.1| glucose-1-phosphate adenylyltransferase [Lactobacillus amylolyticus
DSM 11664]
Length = 243
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L ID + ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKIFQKLSREIYMAAK-SGGPDPSGNPNLRMVIDKARANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRF--- 144
MP IE AIK + + Y E++ + P + +L + ++ RV F
Sbjct: 61 MPKNNIERAIKKAEGNSDEH-YDEITYEGYAPGGVAVFVEALTDNKNRTASDVRVAFTRN 119
Query: 145 ------PPSANFISNRLGLFLECSEPITRMKQASVLL 175
S +++ +R G ++ T + VLL
Sbjct: 120 GGSLGATGSVSYMFDRKG-YIVIDRSTTDADEDQVLL 155
>gi|89075784|ref|ZP_01162172.1| hypothetical protein SKA34_03054 [Photobacterium sp. SKA34]
gi|89048516|gb|EAR54091.1| hypothetical protein SKA34_03054 [Photobacterium sp. SKA34]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK+ NI+H KAA+D ++ +FT L +++ +A KE GG++P N RL + ID ++
Sbjct: 2 AGHSKFANIKHRKAAQDAKRGKIFTKLIREITVAAKE-GGSEPENNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M TI A+
Sbjct: 61 MTRDTINRAV 70
>gi|341614058|ref|ZP_08700927.1| hypothetical protein CJLT1_03857 [Citromicrobium sp. JLT1363]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI H K A+D++++ LF+ LS+++ +A K G DP+ N RL ++ K S
Sbjct: 2 AGHSKFKNIMHRKGAQDKKRSNLFSKLSREITVAAKM-GLPDPDMNPRLRLAVNAAKAQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP I+ AI + + Y E+ + P GSA +V A++ R +
Sbjct: 61 MPKDNIQRAIDKASASDG-ENYEEVRYEGYGPG----------GSAIIVEALTDNRNRTA 109
Query: 148 ANF 150
N
Sbjct: 110 TNI 112
>gi|410463690|ref|ZP_11317189.1| DNA-binding regulatory protein, YebC/PmpR family [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409983188|gb|EKO39578.1| DNA-binding regulatory protein, YebC/PmpR family [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 244
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K+ +D +K+ FT ++K+L LA + GG D N RL S I K +
Sbjct: 2 AGHSKWHNIQARKSVQDAKKSKFFTKVTKELMLAAR-AGGADTALNQRLKSAIAAAKAVN 60
Query: 88 MPMTTIENAIK 98
+P I+ AIK
Sbjct: 61 LPKDKIDQAIK 71
>gi|399155809|ref|ZP_10755876.1| hypothetical protein SclubSA_02685 [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 250
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H KAA+D ++ FT L K+L +A + GG+D + N RL + + K S
Sbjct: 2 SGHSKWSTIKHRKAAQDAKRGKAFTKLIKELTIAAR-IGGSDLDANPRLRTAVANAKSQS 60
Query: 88 MPMTTIENAIK 98
MP I+ AIK
Sbjct: 61 MPKDNIDRAIK 71
>gi|239907721|ref|YP_002954462.1| hypothetical protein DMR_30850 [Desulfovibrio magneticus RS-1]
gi|259646936|sp|C4XIK1.1|Y3085_DESMR RecName: Full=Probable transcriptional regulatory protein
DMR_30850
gi|239797587|dbj|BAH76576.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 244
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K+ +D +K+ FT ++K+L LA + GG D N RL S I K +
Sbjct: 2 AGHSKWHNIQARKSVQDAKKSKFFTKVTKELMLAAR-AGGADTALNQRLKSAIAAAKAVN 60
Query: 88 MPMTTIENAIK 98
+P I+ AIK
Sbjct: 61 LPKDKIDQAIK 71
>gi|149184939|ref|ZP_01863256.1| glucose-1-phosphate adenylyl transferase [Erythrobacter sp. SD-21]
gi|148831050|gb|EDL49484.1| glucose-1-phosphate adenylyl transferase [Erythrobacter sp. SD-21]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI H K A+D++++ LF+ LS+++ +A K G DP+ N RL ++ K S
Sbjct: 2 AGHSKFKNIMHRKGAQDKKRSNLFSKLSREITVAAKM-GMPDPDMNPRLRLAVNAAKSQS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP I+ AI + + Y E+ + P GSA +V A++ R
Sbjct: 61 MPKDNIQRAIDKASAS-DAENYEEVRYEGYGPG----------GSAIIVEALTDNR 105
>gi|428778406|ref|YP_007170192.1| YebC/PmpR family DNA-binding regulatory protein [Dactylococcopsis
salina PCC 8305]
gi|428692685|gb|AFZ48835.1| DNA-binding regulatory protein, YebC/PmpR family
[Dactylococcopsis salina PCC 8305]
Length = 253
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ KA D +K FT LS+ + +A + GG DP N++L + I+ K +S
Sbjct: 2 AGHSKWANIKRQKARVDAKKGKTFTQLSRAIIVAAR-NGGPDPEANFQLRTAIEKAKAAS 60
Query: 88 MPMTTIENAI 97
+P I+ AI
Sbjct: 61 IPNDNIDRAI 70
>gi|89256280|ref|YP_513642.1| hypothetical protein FTL_0929 [Francisella tularensis subsp.
holarctica LVS]
gi|115314732|ref|YP_763455.1| hypothetical protein FTH_0908 [Francisella tularensis subsp.
holarctica OSU18]
gi|156502346|ref|YP_001428411.1| hypothetical protein FTA_0979 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254367615|ref|ZP_04983636.1| hypothetical protein FTHG_00883 [Francisella tularensis subsp.
holarctica 257]
gi|254369263|ref|ZP_04985275.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|290953115|ref|ZP_06557736.1| hypothetical protein FtulhU_01559 [Francisella tularensis subsp.
holarctica URFT1]
gi|422938692|ref|YP_007011839.1| hypothetical protein FTS_0912 [Francisella tularensis subsp.
holarctica FSC200]
gi|423050628|ref|YP_007009062.1| hypothetical protein F92_05115 [Francisella tularensis subsp.
holarctica F92]
gi|119392012|sp|Q2A3R0.1|Y929_FRATH RecName: Full=Probable transcriptional regulatory protein FTL_0929
gi|122325247|sp|Q0BM66.1|Y908_FRATO RecName: Full=Probable transcriptional regulatory protein FTH_0908
gi|166227544|sp|A7NBV2.1|Y979_FRATF RecName: Full=Probable transcriptional regulatory protein FTA_0979
gi|89144111|emb|CAJ79368.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
gi|115129631|gb|ABI82818.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134253426|gb|EBA52520.1| hypothetical protein FTHG_00883 [Francisella tularensis subsp.
holarctica 257]
gi|156252949|gb|ABU61455.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157122213|gb|EDO66353.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|407293843|gb|AFT92749.1| hypothetical protein FTS_0912 [Francisella tularensis subsp.
holarctica FSC200]
gi|421951350|gb|AFX70599.1| hypothetical protein F92_05115 [Francisella tularensis subsp.
holarctica F92]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L +++ +A + GGG D + N RL + I ++
Sbjct: 2 AGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGG-DKDANPRLRAAIATALANN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY 109
M TIE AI +S NV E Y GY
Sbjct: 61 MSKDTIERAIVKGAGGDESANVEEVRYEGY 90
>gi|407005945|gb|EKE21954.1| hypothetical protein ACD_7C00086G0006 [uncultured bacterium]
Length = 246
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H K D ++A +FT +++ + + +EGGG D N++L +D + +
Sbjct: 2 SGHSKWSSIKHKKGINDAKRANVFTKIARMIAIGAREGGG-DLAVNFKLKMLVDKARSVN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|374702817|ref|ZP_09709687.1| hypothetical protein PseS9_05339 [Pseudomonas sp. S9]
Length = 249
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L ++L +A +GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKGRQDAKRGKIFTKLIRELTVAASQGGGV-PADNPRLRLAVDKAPTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ AI + ELS + P+ G A +V AM+ R
Sbjct: 61 MTRDTIDRAIARGVGSTDGEKVEELSYEGYAPS----------GVAIIVEAMTDNR 106
>gi|261343865|ref|ZP_05971510.1| protein YebC [Providencia rustigianii DSM 4541]
gi|282568252|gb|EFB73787.1| protein YebC [Providencia rustigianii DSM 4541]
Length = 247
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A + GGG DP TN RL + ID ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAARLGGG-DPATNPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|386393780|ref|ZP_10078561.1| DNA-binding regulatory protein, YebC/PmpR family [Desulfovibrio
sp. U5L]
gi|385734658|gb|EIG54856.1| DNA-binding regulatory protein, YebC/PmpR family [Desulfovibrio
sp. U5L]
Length = 245
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+ K+ +D +K+ FT ++K+L LA K GG D N RL + I K +
Sbjct: 2 AGHSKWHNIQARKSVQDAKKSKFFTKVTKELMLATK-AGGADTALNNRLKTAIAAAKAVN 60
Query: 88 MPMTTIENAIK 98
+P IE AIK
Sbjct: 61 LPKDKIEQAIK 71
>gi|146329317|ref|YP_001210063.1| hypothetical protein DNO_1179 [Dichelobacter nodosus VCS1703A]
gi|166228903|sp|A5EXG2.1|Y1179_DICNV RecName: Full=Probable transcriptional regulatory protein
DNO_1179
gi|146232787|gb|ABQ13765.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
Length = 244
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L ++L +A + GG+D N N RL + + +
Sbjct: 2 AGHSKWANIKHKKAKEDAKRGKIFTRLIRELTVAARH-GGSDINANPRLRLAVSKAQAEN 60
Query: 88 MPMTTIENAIK 98
M T+E AIK
Sbjct: 61 MTKETMERAIK 71
>gi|403049678|ref|ZP_10904162.1| hypothetical protein SclubSAR_04824, partial [SAR86 cluster
bacterium SAR86D]
Length = 124
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D + ++T + +++ +A K GG DP+ N RL +D ++
Sbjct: 2 AGHSKWANIKHRKARQDASRGKVWTKVIREITVAAK--GGPDPDDNPRLRLALDKANAAN 59
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP I+ AI+ + + E+ + P G A +V AMS R
Sbjct: 60 MPKDNIKRAIEKGSGTGDTGALEEIVLEGYGPG----------GVAIMVEAMSDNR 105
>gi|225024075|ref|ZP_03713267.1| hypothetical protein EIKCOROL_00943 [Eikenella corrodens ATCC
23834]
gi|224943100|gb|EEG24309.1| hypothetical protein EIKCOROL_00943 [Eikenella corrodens ATCC
23834]
Length = 242
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA D ++ +FT L K++ +A + GGG DP +N RL +D ++
Sbjct: 2 AGHSKWANIQHKKARVDAQRGKIFTKLIKEITVAARLGGG-DPASNPRLRLAMDKAWDAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLEL 112
MP ++ AI Y+EL
Sbjct: 61 MPKDNVQRAIDKGTGNLEGVEYIEL 85
>gi|418292002|ref|ZP_12903953.1| hypothetical protein PstZobell_01922 [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379063436|gb|EHY76179.1| hypothetical protein PstZobell_01922 [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 249
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L ++L +A K GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKRGKIFTKLIRELTVAAKHGGGV-PADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M I+ AI ELS + P+ G A ++ AM+ R
Sbjct: 61 MSRDVIDRAIARGAGSSEADNMTELSYEGYAPS----------GVAIIIEAMTDNR 106
>gi|383501644|ref|YP_005415003.1| hypothetical protein MC5_04230 [Rickettsia australis str. Cutlack]
gi|378932655|gb|AFC71160.1| hypothetical protein MC5_04230 [Rickettsia australis str. Cutlack]
Length = 252
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI+H K A+D+++A +FT L +++ AVK G P N RL + + + +
Sbjct: 2 AGHSKFKNIQHRKGAQDKKRAKIFTKLIREIVTAVKTGSSNIPENNPRLRNALTAARSHN 61
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
+P I+ AI S + N Y E+ + P G A +V A++
Sbjct: 62 LPKERIDKAINSAD-DANTENYTEIRYEGYAPN----------GIAIIVEALT 103
>gi|92113968|ref|YP_573896.1| hypothetical protein Csal_1845 [Chromohalobacter salexigens DSM
3043]
gi|119391288|sp|Q1QWG1.1|Y1845_CHRSD RecName: Full=Probable transcriptional regulatory protein
Csal_1845
gi|91797058|gb|ABE59197.1| protein of unknown function DUF28 [Chromohalobacter salexigens
DSM 3043]
Length = 249
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +F+ L ++L +A ++GGG + N RL + ID ++
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFSKLIRELTVASRQGGG-EVADNPRLRAAIDKALANN 60
Query: 88 MPMTTIENAIK 98
M TI+ AI+
Sbjct: 61 MTKDTIQRAIE 71
>gi|269138788|ref|YP_003295489.1| hypothetical protein ETAE_1437 [Edwardsiella tarda EIB202]
gi|387867467|ref|YP_005698936.1| hypothetical protein ETAF_1332 [Edwardsiella tarda FL6-60]
gi|267984449|gb|ACY84278.1| hypothetical protein ETAE_1437 [Edwardsiella tarda EIB202]
gi|304558780|gb|ADM41444.1| hypothetical protein ETAF_1332 [Edwardsiella tarda FL6-60]
Length = 264
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 18 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 76
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 77 MTRDTLNRAI 86
>gi|146283146|ref|YP_001173299.1| hypothetical protein PST_2811 [Pseudomonas stutzeri A1501]
gi|339494910|ref|YP_004715203.1| hypothetical protein PSTAB_2833 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|386021527|ref|YP_005939551.1| hypothetical protein PSTAA_2934 [Pseudomonas stutzeri DSM 4166]
gi|145571351|gb|ABP80457.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
gi|327481499|gb|AEA84809.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
gi|338802282|gb|AEJ06114.1| hypothetical protein PSTAB_2833 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 249
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L ++L +A K GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKRGKIFTKLIRELTVAAKHGGGV-PADNPRLRLAVDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M I+ AI ELS + P+ G A ++ AM+ R
Sbjct: 61 MSREVIDRAIARGAGSNEADNMTELSYEGYAPS----------GVAIIIEAMTDNR 106
>gi|292490333|ref|YP_003525772.1| hypothetical protein Nhal_0175 [Nitrosococcus halophilus Nc4]
gi|291578928|gb|ADE13385.1| protein of unknown function DUF28 [Nitrosococcus halophilus Nc4]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI++ K A+D ++ LFT L +++ +A + GG DP T+ RL ID ++
Sbjct: 2 AGHSKWANIQYRKGAQDAKRGKLFTKLIREITVAARLEGG-DPATSPRLRIAIDKALAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
MP IE AIK Y E+ + P G A +V M+ R
Sbjct: 61 MPKDNIERAIKRGTGDMEGVAYEEIRYEGYGP----------HGVAVMVDCMTDNR 106
>gi|226945721|ref|YP_002800794.1| hypothetical protein Avin_36720 [Azotobacter vinelandii DJ]
gi|226720648|gb|ACO79819.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 249
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT L ++L +A K GGG P N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKRGKIFTKLIRELTVAAKHGGGN-PADNPRLRLAMDKALTAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ AI ELS + P+ G A +V A++ R
Sbjct: 61 MTRDTIDRAIARGAGTSEADNMAELSYEGYAPS----------GVAIIVEALTDNR 106
>gi|58699373|ref|ZP_00374140.1| conserved hypothetical protein TIGR01033 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534114|gb|EAL58346.1| conserved hypothetical protein TIGR01033 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHS++ NI+H K A+D +++ FT L +++ +A K+ G DP N RL S I +K +
Sbjct: 4 AGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQ-GLPDPELNPRLRSAIFAARKEN 62
Query: 88 MPMTTIENAIKSCNVPENIYG--YLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVR 143
+P IE AIK N N+ G Y E+ P+ G+A +V A++ R R
Sbjct: 63 LPKDKIETAIK--NATGNVAGENYEEIQYEGHGPS----------GTALIVHALTNNRNR 110
Query: 144 FPPSANFISNRLG 156
+I +R G
Sbjct: 111 TASEVRYIFSRKG 123
>gi|403714156|ref|ZP_10940119.1| putative transcriptional regulator [Kineosphaera limosa NBRC
100340]
gi|403211826|dbj|GAB94802.1| putative transcriptional regulator [Kineosphaera limosa NBRC
100340]
Length = 275
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GGG DP N L I KKSS
Sbjct: 22 SGHSKWATTKHKKAALDAKRGKLFAKLIKNIEVAARTGGG-DPTGNPTLYDAIQKAKKSS 80
Query: 88 MPMTTIENAIK 98
+P I+ A+K
Sbjct: 81 VPNDNIDRAVK 91
>gi|238919500|ref|YP_002933015.1| conserved hypothetical protein TIGR01033 [Edwardsiella ictaluri
93-146]
gi|259646443|sp|C5B9S9.1|Y1596_EDWI9 RecName: Full=Probable transcriptional regulatory protein
NT01EI_1596
gi|238869069|gb|ACR68780.1| conserved hypothetical protein TIGR01033 [Edwardsiella ictaluri
93-146]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|326803199|ref|YP_004321017.1| DNA-binding regulatory protein, YebC/PmpR family [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650563|gb|AEA00746.1| DNA-binding regulatory protein, YebC/PmpR family [Aerococcus urinae
ACS-120-V-Col10a]
Length = 243
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I++ K A+D ++A +F LS+++ +AVK+ GG D + N L +D K ++
Sbjct: 2 SGHNKWSKIKNTKGAEDAKRAKIFQKLSREIYMAVKQ-GGPDADANPSLRMVMDKAKAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP T IE AI + Y E++ + P
Sbjct: 61 MPKTNIERAIDKGSNTAGGEDYDEVTYEGYGP 92
>gi|70732091|ref|YP_261847.1| hypothetical protein PFL_4766 [Pseudomonas protegens Pf-5]
gi|119372135|sp|Q4K7D6.1|Y4766_PSEF5 RecName: Full=Probable transcriptional regulatory protein PFL_4766
gi|68346390|gb|AAY93996.1| DNA-binding regulatory protein, YebC/PmpR family [Pseudomonas
protegens Pf-5]
Length = 248
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ +FT ++L +A ++GGG DPN+N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKRGKIFTKWIRELTVAARQGGG-DPNSNPRLRLALDKALGAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
M I+ AI +EL+ + P G A +V M+ R +
Sbjct: 61 MSRDIIDRAIARGTGAAGSDDVVELTYEGYGPN----------GVAVMVECMTDNRNRTA 110
Query: 148 A 148
A
Sbjct: 111 A 111
>gi|451964560|ref|ZP_21917824.1| putative transcriptional regulatory protein [Edwardsiella tarda
NBRC 105688]
gi|451316680|dbj|GAC63186.1| putative transcriptional regulatory protein [Edwardsiella tarda
NBRC 105688]
Length = 248
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP+ N RL + +D ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDANPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|381404250|ref|ZP_09928934.1| hypothetical protein S7A_08360 [Pantoea sp. Sc1]
gi|380737449|gb|EIB98512.1| hypothetical protein S7A_08360 [Pantoea sp. Sc1]
Length = 247
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP +N RL + +D ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPGSNPRLRAAMDKALSNN 60
Query: 88 MPMTTIENAI 97
M T++ AI
Sbjct: 61 MTRDTMDRAI 70
>gi|407004528|gb|EKE20893.1| protein of unknown function DUF28 [uncultured bacterium]
Length = 239
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +I+H K D ++A +FT +++ + + +EGGG D N++L +D + +
Sbjct: 2 SGHSKWSSIKHKKGINDAKRANVFTKIARMIAIGAREGGG-DLAVNFKLKMLVDKARSVN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|271967394|ref|YP_003341590.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270510569|gb|ACZ88847.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 250
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GG DP+ N L I +KSS
Sbjct: 2 SGHSKWATTKHKKAALDSKRGKLFAKLIKNIEVAART-GGPDPDGNPTLYDAITKARKSS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTL-------SIARLVSLEGSACLVS--- 137
+P+ IE A K G LE W+ + +A L+ CL
Sbjct: 61 VPIDNIERARKRG-------GGLEAGGADWQTIMYEGYAPGGVAVLIE-----CLTDNRN 108
Query: 138 -AMSRVRF-----------PPSANFISNRLGLFLECSEPITRMKQASVLLA 176
A S VR P S +++ NR G+ L P + + VL A
Sbjct: 109 RAASEVRVALTRNGGSLADPGSVSYMFNRKGVVL---VPKGELSEDDVLTA 156
>gi|416048282|ref|ZP_11576242.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347993292|gb|EGY34664.1| dATP pyrophosphohydrolase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
Length = 246
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KAA+D ++ +FT L ++L A K GGG D +N RL + +D ++
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGG-DVGSNPRLRAAVDKALSNN 60
Query: 88 MPMTTIENAIK 98
M TI I+
Sbjct: 61 MTRDTINRVIE 71
>gi|421837888|ref|ZP_16271935.1| hypothetical protein CFSAN001627_20023 [Clostridium botulinum
CFSAN001627]
gi|409739850|gb|EKN40376.1| hypothetical protein CFSAN001627_20023 [Clostridium botulinum
CFSAN001627]
Length = 258
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++ +FT + K++ +AVK+GG + ++N RL I K ++
Sbjct: 2 SGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPS-ADSNPRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP TIE +IK + N Y ++ + P IA LV +
Sbjct: 61 MPNDTIERSIKKASGELNAVDYETITYEGYGPA-GIAVLVDV 101
>gi|410939200|ref|ZP_11371035.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
noguchii str. 2006001870]
gi|410785705|gb|EKR74661.1| DNA-binding regulatory protein, YebC/PmpR family [Leptospira
noguchii str. 2006001870]
Length = 249
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ K A D ++ +FT + K++ +A K GGG DP N RL I K +
Sbjct: 2 SGHSKWATIKRKKDAIDSKRGAIFTRVGKEITVAAKMGGG-DPEGNPRLRLAILKAKSVN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS--RVRFP 145
MP IE A++ G EL + ++ L G A +VSA++ + R
Sbjct: 61 MPKDNIERAVRK--------GTGELEGVTYEECL--YECFGPGGIAIMVSAVTDKKSRTT 110
Query: 146 PSANFISNRLGLFLECSEPITRM--KQASVLLATA 178
P I +LG L S ++R+ K+ ++L ++
Sbjct: 111 PEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESS 145
>gi|269468787|gb|EEZ80391.1| hypothetical protein Sup05_0827 [uncultured SUP05 cluster
bacterium]
Length = 246
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ +FT L K++ +A K GGG N N L ID ++
Sbjct: 2 AGHSKWHNIQHRKGAQDAKRGKIFTKLIKEIVIAAKVGGGVIEN-NPSLRMVIDKALAAN 60
Query: 88 MPMTTIENAIK 98
M TIE+A+K
Sbjct: 61 MKRDTIESAVK 71
>gi|406987131|gb|EKE07568.1| hypothetical protein ACD_18C00053G0005 [uncultured bacterium]
Length = 242
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D+ ++ LFT L+K + +A + GGG D N+ L ID K +
Sbjct: 2 SGHSKWHNIQGKKGKADKARSNLFTKLAKTITVAAQLGGG-DVEMNFSLRLAIDKAKTGN 60
Query: 88 MPMTTIENAIK 98
MP IE AIK
Sbjct: 61 MPKDNIERAIK 71
>gi|317491785|ref|ZP_07950220.1| hypothetical protein HMPREF0864_00983 [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316920219|gb|EFV41543.1| hypothetical protein HMPREF0864_00983 [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 248
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP N RL + ID ++
Sbjct: 2 AGHSKWANTKHRKAAQDSKRGKIFTKIIRELVTAAKLGGG-DPGANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|308187175|ref|YP_003931306.1| hypothetical protein Pvag_1669 [Pantoea vagans C9-1]
gi|308057685|gb|ADO09857.1| UPF0082 protein [Pantoea vagans C9-1]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP +N RL + +D ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPGSNPRLRAAMDKALANN 60
Query: 88 MPMTTIENAI 97
M T++ AI
Sbjct: 61 MTRDTMDRAI 70
>gi|157371019|ref|YP_001479008.1| hypothetical protein Spro_2779 [Serratia proteamaculans 568]
gi|333927720|ref|YP_004501299.1| hypothetical protein SerAS12_2873 [Serratia sp. AS12]
gi|333932674|ref|YP_004506252.1| hypothetical protein SerAS9_2872 [Serratia plymuthica AS9]
gi|386329543|ref|YP_006025713.1| hypothetical protein [Serratia sp. AS13]
gi|166988611|sp|A8GFJ0.1|Y2779_SERP5 RecName: Full=Probable transcriptional regulatory protein
Spro_2779
gi|157322783|gb|ABV41880.1| protein of unknown function DUF28 [Serratia proteamaculans 568]
gi|333474281|gb|AEF45991.1| protein of unknown function DUF28 [Serratia plymuthica AS9]
gi|333491780|gb|AEF50942.1| protein of unknown function DUF28 [Serratia sp. AS12]
gi|333961876|gb|AEG28649.1| protein of unknown function DUF28 [Serratia sp. AS13]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP N RL + ID ++
Sbjct: 2 AGHSKWANTKHRKAAQDSKRGKIFTKIIRELVTAAKLGGG-DPGANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|398835766|ref|ZP_10593123.1| DNA-binding regulatory protein, YebC/PmpR family [Herbaspirillum
sp. YR522]
gi|398215204|gb|EJN01769.1| DNA-binding regulatory protein, YebC/PmpR family [Herbaspirillum
sp. YR522]
Length = 241
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ + ++T L K++ +A + GGG D +TN RL +D ++
Sbjct: 2 AGHSKWANIQHRKGRQDERRGRIWTRLIKEITVAARMGGG-DADTNPRLRLAVDRASDAN 60
Query: 88 MPMTTIENAIK 98
MP + AI+
Sbjct: 61 MPKDNVTRAIQ 71
>gi|424834769|ref|ZP_18259464.1| hypothetical protein IYC_13379 [Clostridium sporogenes PA 3679]
gi|365978454|gb|EHN14532.1| hypothetical protein IYC_13379 [Clostridium sporogenes PA 3679]
Length = 246
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++ +FT + K++ +AVK+GG + ++N RL I K ++
Sbjct: 2 SGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPS-ADSNPRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP TIE +IK + N Y ++ + P IA LV +
Sbjct: 61 MPNDTIERSIKKASGELNAVDYETITYEGYGPA-GIAVLVDV 101
>gi|304396237|ref|ZP_07378119.1| protein of unknown function DUF28 [Pantoea sp. aB]
gi|440757582|ref|ZP_20936766.1| hypothetical protein F385_596 [Pantoea agglomerans 299R]
gi|304356606|gb|EFM20971.1| protein of unknown function DUF28 [Pantoea sp. aB]
gi|436428705|gb|ELP26358.1| hypothetical protein F385_596 [Pantoea agglomerans 299R]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP +N RL + +D ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPGSNPRLRAAMDKALANN 60
Query: 88 MPMTTIENAI 97
M T++ AI
Sbjct: 61 MTRDTMDRAI 70
>gi|270262225|ref|ZP_06190497.1| hypothetical protein SOD_b04330 [Serratia odorifera 4Rx13]
gi|421783957|ref|ZP_16220400.1| hypothetical protein B194_3008 [Serratia plymuthica A30]
gi|270044101|gb|EFA17193.1| hypothetical protein SOD_b04330 [Serratia odorifera 4Rx13]
gi|407753820|gb|EKF63960.1| hypothetical protein B194_3008 [Serratia plymuthica A30]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP N RL + ID ++
Sbjct: 2 AGHSKWANTKHRKAAQDSKRGKIFTKIIRELVTAAKLGGG-DPGANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|254485951|ref|ZP_05099156.1| conserved hypothetical protein TIGR01033 [Roseobacter sp. GAI101]
gi|214042820|gb|EEB83458.1| conserved hypothetical protein TIGR01033 [Roseobacter sp. GAI101]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D+ +A +F+ +SK++ +A K G DP+ N RL + K S
Sbjct: 2 AGHSKWANIQHRKGRQDKLRAKVFSKMSKEITVAAK-MGDPDPDKNPRLRLAVKEAKSVS 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
+P I+ AIK + Y E+ + P G A +V AM+ R
Sbjct: 61 VPKDVIDRAIKKSQAGDG-EDYEEIRYEGYGPN----------GVAVIVEAMTDNR 105
>gi|218780798|ref|YP_002432116.1| hypothetical protein Dalk_2958 [Desulfatibacillum alkenivorans
AK-01]
gi|226701573|sp|B8FL13.1|Y2958_DESAA RecName: Full=Probable transcriptional regulatory protein
Dalk_2958
gi|218762182|gb|ACL04648.1| protein of unknown function DUF28 [Desulfatibacillum alkenivorans
AK-01]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GH+KW I+H K A D ++ +F+ L K++ +A + GGG DP+ N RL + I+ K +
Sbjct: 2 SGHNKWSTIKHKKGAADAKRGKVFSKLIKEITIAARMGGG-DPDANPRLRTAINAAKAEN 60
Query: 88 MPMTTIENAIK 98
MP E AIK
Sbjct: 61 MPKDNWERAIK 71
>gi|148242932|ref|YP_001228089.1| hypothetical protein SynRCC307_1833 [Synechococcus sp. RCC307]
gi|166227213|sp|A5GV27.1|Y1833_SYNR3 RecName: Full=Probable transcriptional regulatory protein
SynRCC307_1833
gi|147851242|emb|CAK28736.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
Length = 253
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ KA D ++ +FT L +++ +A + G DP+ N++L + I+ K +
Sbjct: 2 AGHSKWSQIKRTKAVVDAKRGAVFTRLGREISVAAR--AGADPDGNFQLRTAINKAKAAG 59
Query: 88 MPMTTIENAI-KSCNV 102
+P IE AI K C
Sbjct: 60 VPAANIERAIAKGCGA 75
>gi|254557054|ref|YP_003063471.1| hypothetical protein JDM1_1887 [Lactobacillus plantarum JDM1]
gi|300768047|ref|ZP_07077953.1| glucose-1-phosphate adenylyltransferase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|380032985|ref|YP_004889976.1| YebC/PmpR family DNA-binding regulatory protein [Lactobacillus
plantarum WCFS1]
gi|418275780|ref|ZP_12891103.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448821760|ref|YP_007414922.1| putative transcriptional regulatory protein [Lactobacillus
plantarum ZJ316]
gi|33517009|sp|Q88V33.1|Y2253_LACPL RecName: Full=Probable transcriptional regulatory protein lp_2253
gi|254045981|gb|ACT62774.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
gi|300494396|gb|EFK29558.1| glucose-1-phosphate adenylyltransferase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|342242228|emb|CCC79462.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
plantarum WCFS1]
gi|376009331|gb|EHS82660.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448275257|gb|AGE39776.1| putative transcriptional regulatory protein [Lactobacillus
plantarum ZJ316]
Length = 242
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F +S++L +AVK GG DP++N +L +D K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKISRELYMAVK-AGGPDPDSNAQLRLVMDKAKAAN 60
Query: 88 MPMTTIENAIK--SCNVPENIYGYLELSCLPWKPTLSIARLV 127
MP I+ A+ S + EN Y E++ + P IA LV
Sbjct: 61 MPKDNIKRAVDKGSGSGAEN---YEEVTYEGYGPG-GIAVLV 98
>gi|312196175|ref|YP_004016236.1| hypothetical protein FraEuI1c_2327 [Frankia sp. EuI1c]
gi|311227511|gb|ADP80366.1| protein of unknown function DUF28 [Frankia sp. EuI1c]
Length = 251
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KA KD + LF L K +++A K GGG DP N LA I K S
Sbjct: 2 SGHSKWATTKHQKAVKDARRGKLFAKLIKTIEVAAKTGGG-DPAGNPTLADAIAKAKSQS 60
Query: 88 MPMTTIENAIK 98
+P I+ A+K
Sbjct: 61 VPNENIDRAVK 71
>gi|147677359|ref|YP_001211574.1| hypothetical protein PTH_1024 [Pelotomaculum thermopropionicum SI]
gi|189038544|sp|A5D3F8.1|Y1024_PELTS RecName: Full=Probable transcriptional regulatory protein PTH_1024
gi|146273456|dbj|BAF59205.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum
SI]
Length = 243
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+ KA D ++ +FT L++++ +A ++GGG DP +N RL + I K+++
Sbjct: 2 SGHSKWSTIKRKKAKVDAQRGKIFTRLAREIIVAARQGGG-DPESNVRLKAAIQRAKEAN 60
Query: 88 MPMTTIENAIK-------SCNVPENIY-GY 109
+P I AI+ N E IY GY
Sbjct: 61 VPNENIMRAIQKGTGELGGANYEEIIYEGY 90
>gi|372277276|ref|ZP_09513312.1| hypothetical protein PSL1_19421 [Pantoea sp. SL1_M5]
gi|390434874|ref|ZP_10223412.1| hypothetical protein PaggI_08582 [Pantoea agglomerans IG1]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP +N RL + +D ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPGSNPRLRAAMDKALANN 60
Query: 88 MPMTTIENAI 97
M T++ AI
Sbjct: 61 MTRDTMDRAI 70
>gi|334881995|emb|CCB82940.1| UPF0082 protein lp_2253 [Lactobacillus pentosus MP-10]
gi|339639197|emb|CCC18428.1| UPF0082 protein lp_2253 [Lactobacillus pentosus IG1]
Length = 242
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F +S++L +AVK GG DP++N +L +D K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKISRELYMAVK-AGGPDPDSNAQLRLVMDKAKAAN 60
Query: 88 MPMTTIENAIK--SCNVPENIYGYLELSCLPWKPTLSIARLV 127
MP I+ A+ S + EN Y E++ + P IA LV
Sbjct: 61 MPKDNIKRAVDKGSGSGAEN---YEEVTYEGYGPG-GIAVLV 98
>gi|319944358|ref|ZP_08018632.1| YebC like protein [Lautropia mirabilis ATCC 51599]
gi|319742319|gb|EFV94732.1| YebC like protein [Lautropia mirabilis ATCC 51599]
Length = 242
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D ++ LFT L K++ +A K GG DP N RL ++ +
Sbjct: 2 AGHSKWANIQHRKGRQDAKRGALFTRLIKEITVAAKMAGG-DPAMNPRLRLAMEKAADGN 60
Query: 88 MPMTTIENAIK 98
MP T++ AI+
Sbjct: 61 MPKDTVQRAIQ 71
>gi|308181048|ref|YP_003925176.1| hypothetical protein LPST_C1866 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308046539|gb|ADN99082.1| hypothetical protein LPST_C1866 [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 242
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F +S++L +AVK GG DP++N +L +D K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKISRELYMAVK-AGGPDPDSNAQLRLVMDKAKAAN 60
Query: 88 MPMTTIENAIK--SCNVPENIYGYLELSCLPWKPTLSIARLV 127
MP I+ A+ S + EN Y E++ + P IA LV
Sbjct: 61 MPKDNIKRAVDKGSGSGAEN---YEEVTYEGYGPG-GIAVLV 98
>gi|298346874|ref|YP_003719561.1| hypothetical protein HMPREF0573_11748 [Mobiluncus curtisii ATCC
43063]
gi|304389421|ref|ZP_07371384.1| YebC like protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315655419|ref|ZP_07908319.1| YebC like protein [Mobiluncus curtisii ATCC 51333]
gi|315656668|ref|ZP_07909555.1| YebC like protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|298236935|gb|ADI68067.1| protein of hypothetical function DUF28 [Mobiluncus curtisii ATCC
43063]
gi|304327231|gb|EFL94466.1| YebC like protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315490359|gb|EFU79984.1| YebC like protein [Mobiluncus curtisii ATCC 51333]
gi|315492623|gb|EFU82227.1| YebC like protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 252
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GGG DP N L I KKSS
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARTGGG-DPAGNPTLFDAIQKAKKSS 60
Query: 88 MPMTTIENAIKSCNVPEN 105
+P I+ A+K + E+
Sbjct: 61 VPADNIDRAVKRGSGAES 78
>gi|427390112|ref|ZP_18884518.1| YebC/PmpR family DNA-binding regulatory protein [Actinobaculum
massiliae ACS-171-V-Col2]
gi|425733127|gb|EKU95933.1| YebC/PmpR family DNA-binding regulatory protein [Actinobaculum
massiliae ACS-171-V-Col2]
Length = 250
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ +F L K +++A + GGG DP+ N L I K++S
Sbjct: 2 SGHSKWATTKHKKAANDAKRGKMFARLVKNIEVAARTGGG-DPDGNPTLYDAIQKAKRAS 60
Query: 88 MPMTTIENAIK 98
+P I+ A+K
Sbjct: 61 VPADNIDRAVK 71
>gi|392949240|ref|ZP_10314827.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
pentosus KCA1]
gi|392435552|gb|EIW13489.1| DNA-binding regulatory protein, YebC/PmpR family [Lactobacillus
pentosus KCA1]
Length = 242
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F +S++L +AVK GG DP++N +L +D K ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKISRELYMAVK-AGGPDPDSNAQLRLVMDKAKAAN 60
Query: 88 MPMTTIENAIK--SCNVPENIYGYLELSCLPWKPTLSIARLV 127
MP I+ A+ S + EN Y E++ + P IA LV
Sbjct: 61 MPKDNIKRAVDKGSGSGAEN---YEEVTYEGYGPG-GIAVLV 98
>gi|383640876|ref|ZP_09953282.1| hypothetical protein SeloA3_03278 [Sphingomonas elodea ATCC 31461]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI H K A+D++++ +F+ LS+++ +A K G DP+ N RL + I+ K S
Sbjct: 2 AGHSKFKNIMHRKGAQDKKRSAMFSKLSREITVAAKM-GLPDPDMNPRLRAAINAAKAQS 60
Query: 88 MPMTTIENAIKSCNVPE 104
MP I+ AI + E
Sbjct: 61 MPKDNIQRAIDKASKGE 77
>gi|170761256|ref|YP_001788393.1| hypothetical protein CLK_2466 [Clostridium botulinum A3 str. Loch
Maree]
gi|226701597|sp|B1L0B5.1|Y2466_CLOBM RecName: Full=Probable transcriptional regulatory protein CLK_2466
gi|169408245|gb|ACA56656.1| conserved hypothetical protein TIGR01033 [Clostridium botulinum A3
str. Loch Maree]
Length = 246
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++ +FT + K++ +AVK+GG + ++N RL I K ++
Sbjct: 2 SGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPS-ADSNPRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP TIE +IK + N Y ++ + P IA LV +
Sbjct: 61 MPNDTIERSIKKASGELNAVDYETITYEGYGPA-GIAVLVDV 101
>gi|395244749|ref|ZP_10421703.1| UPF0082 protein LBGG_00571 [Lactobacillus hominis CRBIP 24.179]
gi|394482955|emb|CCI82711.1| UPF0082 protein LBGG_00571 [Lactobacillus hominis CRBIP 24.179]
Length = 243
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K A+D ++ +F LS+++ +A K GG DP+ N L +D + ++
Sbjct: 2 SGHSKWHNIQGRKNAQDAKRGKVFQKLSREIYMAAK-SGGPDPSGNPSLRLVMDKARAAN 60
Query: 88 MPMTTIENAIKSC--NVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMS 140
MP T IE AIK N E+ Y E++ + P G A LV A++
Sbjct: 61 MPKTNIERAIKKAEGNSEEH---YDEITYEGYAPG----------GVAVLVEALT 102
>gi|386822463|ref|ZP_10109676.1| hypothetical protein Q5A_00015 [Serratia plymuthica PRI-2C]
gi|386380630|gb|EIJ21354.1| hypothetical protein Q5A_00015 [Serratia plymuthica PRI-2C]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP N RL + ID ++
Sbjct: 2 AGHSKWANTKHRKAAQDSKRGKIFTKIIRELVTAAKLGGG-DPGANPRLRAAIDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTLNRAI 70
>gi|326386110|ref|ZP_08207734.1| hypothetical protein Y88_2002 [Novosphingobium nitrogenifigens DSM
19370]
gi|326209335|gb|EGD60128.1| hypothetical protein Y88_2002 [Novosphingobium nitrogenifigens DSM
19370]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI H K A+D++++ +F+ LS+++ +A K G DP+ N RL + I+ K S
Sbjct: 2 AGHSKFKNIMHRKGAQDKKRSAMFSKLSREITVAAKM-GMPDPDMNPRLRAAINAAKAQS 60
Query: 88 MPMTTIENAIKSCN 101
MP I+ AI +
Sbjct: 61 MPKDNIQRAIDKAS 74
>gi|116625018|ref|YP_827174.1| hypothetical protein Acid_5948 [Candidatus Solibacter usitatus
Ellin6076]
gi|122252543|sp|Q01TY1.1|Y5948_SOLUE RecName: Full=Probable transcriptional regulatory protein
Acid_5948
gi|116228180|gb|ABJ86889.1| protein of unknown function DUF28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 248
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H KAA D ++ FT L K++ +A + GG DP+ N RL S I K S
Sbjct: 2 SGHSKWATIKHKKAATDAKRGRAFTRLIKEITIAARNGG--DPDGNPRLRSAILAAKNVS 59
Query: 88 MPMTTIENAI 97
MP I+ AI
Sbjct: 60 MPSDNIKKAI 69
>gi|379709795|ref|YP_005265000.1| hypothetical protein NOCYR_3600 [Nocardia cyriacigeorgica GUH-2]
gi|374847294|emb|CCF64364.1| conserved protein of unknown function [Nocardia cyriacigeorgica
GUH-2]
Length = 250
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A + GGG DP+ N L I KKSS
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEVAARTGGG-DPDGNPTLYDAIQKAKKSS 60
Query: 88 MPMTTIENAIK 98
+P IE A K
Sbjct: 61 VPNDNIERARK 71
>gi|391232052|ref|ZP_10268258.1| DNA-binding regulatory protein, YebC/PmpR family [Opitutaceae
bacterium TAV1]
gi|391221713|gb|EIQ00134.1| DNA-binding regulatory protein, YebC/PmpR family [Opitutaceae
bacterium TAV1]
Length = 240
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++ KA D K +F+ LS+ + LA K GGG DP N RL + + ++++
Sbjct: 2 AGHNKWSKVKRQKAVTDARKGKVFSRLSRDITLAAKAGGG-DPEGNARLRTLLAKAREAN 60
Query: 88 MPMTTIENAIK 98
MP ++ A+K
Sbjct: 61 MPADNVDRAVK 71
>gi|87301201|ref|ZP_01084042.1| hypothetical protein WH5701_14986 [Synechococcus sp. WH 5701]
gi|87284169|gb|EAQ76122.1| hypothetical protein WH5701_14986 [Synechococcus sp. WH 5701]
Length = 257
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ KA D + +FT L +++ +A + G DP N++L + ID K +
Sbjct: 2 AGHSKWAQIKRQKAVVDARRGVVFTRLGREITVAARH--GADPAGNFQLRTAIDKAKAAG 59
Query: 88 MPMTTIENAI 97
MP IE A+
Sbjct: 60 MPSANIERAV 69
>gi|422679998|ref|ZP_16738271.1| hypothetical protein PSYTB_06602, partial [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|331009345|gb|EGH89401.1| hypothetical protein PSYTB_06602 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 217
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +K +FT ++L +A ++GGG DP +N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGG-DPGSNPRLRLALDKALGAN 60
Query: 88 MPMTTIENAI 97
M TI+ A+
Sbjct: 61 MTRDTIDRAV 70
>gi|226356933|ref|YP_002786673.1| hypothetical protein Deide_19240 [Deinococcus deserti VCD115]
gi|226318923|gb|ACO46919.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 242
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW I+ K A D+ ++ +++ + ++ AV+ GG DP N L + I K +
Sbjct: 2 AGHSKWSQIKRKKGANDKRRSAMYSKHIRAIQAAVRSGGSGDPGGNLSLKNAIAAAKADT 61
Query: 88 MPMTTIENAIK-SCNVPENIYGYLELSCLPWKP 119
+P+ I+NAIK + E Y +++ + P
Sbjct: 62 VPVDNIDNAIKRAVGAGEGAADYKDVTYEGYGP 94
>gi|187778346|ref|ZP_02994819.1| hypothetical protein CLOSPO_01938 [Clostridium sporogenes ATCC
15579]
gi|187771971|gb|EDU35773.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium
sporogenes ATCC 15579]
Length = 246
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++ +FT + K++ +AVK+GG + ++N RL I K ++
Sbjct: 2 SGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPS-ADSNPRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP TIE +IK + N Y ++ + P IA LV +
Sbjct: 61 MPNDTIERSIKKASGELNAVDYETITYEGYGPA-GIAVLVDV 101
>gi|422608620|ref|ZP_16680596.1| hypothetical protein PSYMO_26974 [Pseudomonas syringae pv. mori
str. 301020]
gi|330892238|gb|EGH24899.1| hypothetical protein PSYMO_26974 [Pseudomonas syringae pv. mori
str. 301020]
Length = 248
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +K +FT ++L +A ++GGG DP +N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGG-DPGSNPRLRLALDKALGAN 60
Query: 88 MPMTTIENAI 97
M TI+ A+
Sbjct: 61 MTRDTIDRAV 70
>gi|183601644|ref|ZP_02963014.1| hypothetical protein BIFLAC_03292 [Bifidobacterium animalis
subsp. lactis HN019]
gi|219683822|ref|YP_002470205.1| hypothetical protein BLA_1344 [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190858|ref|YP_002968252.1| hypothetical protein Balac_0823 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196264|ref|YP_002969819.1| hypothetical protein Balat_0823 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384191105|ref|YP_005576853.1| cytosolic protein [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192250|ref|YP_005577997.1| protein YebC [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|384193852|ref|YP_005579598.1| YebC family protein [Bifidobacterium animalis subsp. lactis BLC1]
gi|384195416|ref|YP_005581161.1| hypothetical protein BalV_0794 [Bifidobacterium animalis subsp.
lactis V9]
gi|387820725|ref|YP_006300768.1| protein YebC [Bifidobacterium animalis subsp. lactis B420]
gi|387822398|ref|YP_006302347.1| protein YebC [Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679384|ref|ZP_17654260.1| hypothetical protein FEM_12364 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|254800047|sp|B8DUF0.1|Y1344_BIFA0 RecName: Full=Probable transcriptional regulatory protein
BLA_1344
gi|183219250|gb|EDT89891.1| hypothetical protein BIFLAC_03292 [Bifidobacterium animalis
subsp. lactis HN019]
gi|219621472|gb|ACL29629.1| conserved hypothetical protein [Bifidobacterium animalis subsp.
lactis AD011]
gi|240249250|gb|ACS46190.1| hypothetical protein Balac_0823 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250818|gb|ACS47757.1| hypothetical protein Balat_0823 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289178597|gb|ADC85843.1| Hypothetical cytosolic protein [Bifidobacterium animalis subsp.
lactis BB-12]
gi|295793847|gb|ADG33382.1| hypothetical protein BalV_0794 [Bifidobacterium animalis subsp.
lactis V9]
gi|340364987|gb|AEK30278.1| YebC [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|345282711|gb|AEN76565.1| YebC family protein [Bifidobacterium animalis subsp. lactis BLC1]
gi|366041495|gb|EHN17990.1| hypothetical protein FEM_12364 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386653426|gb|AFJ16556.1| YebC [Bifidobacterium animalis subsp. lactis B420]
gi|386655006|gb|AFJ18135.1| YebC [Bifidobacterium animalis subsp. lactis Bi-07]
Length = 251
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A ++GGG DP+ N L I KK+S
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARQGGG-DPDGNPALYDAIYKAKKAS 60
Query: 88 MPMTTIENAI 97
MP I+ A+
Sbjct: 61 MPADNIKRAV 70
>gi|182439807|ref|YP_001827526.1| hypothetical protein SGR_6014 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326780471|ref|ZP_08239736.1| UPF0082 protein yeeN [Streptomyces griseus XylebKG-1]
gi|226707774|sp|B1W3G1.1|Y6014_STRGG RecName: Full=Probable transcriptional regulatory protein
SGR_6014
gi|178468323|dbj|BAG22843.1| conserved hypothetical protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326660804|gb|EGE45650.1| UPF0082 protein yeeN [Streptomyces griseus XylebKG-1]
Length = 250
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KA D ++ LF L K +++A + GG DP+ N L I KKSS
Sbjct: 2 SGHSKWATTKHKKAVIDAKRGKLFAKLIKNIEVAARS-GGVDPDGNPTLVDAIQKAKKSS 60
Query: 88 MPMTTIENAIK 98
+P IE+A+K
Sbjct: 61 VPNKNIESAVK 71
>gi|160895307|ref|ZP_02076078.1| hypothetical protein CLOL250_02866 [Clostridium sp. L2-50]
gi|156863000|gb|EDO56431.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium sp.
L2-50]
Length = 246
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSK+ NI+H K D K +FT + K++ +AVKE GG +P+ N +L I K ++
Sbjct: 2 SGHSKFANIKHKKEKNDAAKGKIFTIIGKEIAIAVKE-GGANPDNNSKLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFPPS 147
MP TI+ I N Y+ + + P G+A +V ++ + +
Sbjct: 61 MPNDTIKRGIDRAAGDANSVNYVANTYEGYGPN----------GTAIIVDTLTDNKNRTA 110
Query: 148 AN 149
AN
Sbjct: 111 AN 112
>gi|153940103|ref|YP_001392351.1| hypothetical protein CLI_3132 [Clostridium botulinum F str.
Langeland]
gi|168181763|ref|ZP_02616427.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium
botulinum Bf]
gi|237796529|ref|YP_002864081.1| hypothetical protein CLJ_B3338 [Clostridium botulinum Ba4 str. 657]
gi|384463326|ref|YP_005675921.1| hypothetical protein CBF_3121 [Clostridium botulinum F str. 230613]
gi|166229389|sp|A7GHU1.1|Y3132_CLOBL RecName: Full=Probable transcriptional regulatory protein CLI_3132
gi|259646958|sp|C3KTD5.1|Y3338_CLOB6 RecName: Full=Probable transcriptional regulatory protein CLJ_B3338
gi|152935999|gb|ABS41497.1| conserved hypothetical protein TIGR01033 [Clostridium botulinum F
str. Langeland]
gi|182674985|gb|EDT86946.1| DNA-binding regulatory protein, YebC/PmpR family [Clostridium
botulinum Bf]
gi|229261005|gb|ACQ52038.1| conserved hypothetical protein TIGR01033 [Clostridium botulinum Ba4
str. 657]
gi|295320343|gb|ADG00721.1| conserved hypothetical protein TIGR01033 [Clostridium botulinum F
str. 230613]
Length = 246
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW NI+ K D ++ +FT + K++ +AVK+GG + ++N RL I K ++
Sbjct: 2 SGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPS-ADSNPRLRDVIAKAKANN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSL 129
MP TIE +IK + N Y ++ + P IA LV +
Sbjct: 61 MPNDTIERSIKKASGELNAVDYETITYEGYGPA-GIAVLVDV 101
>gi|28871125|ref|NP_793744.1| hypothetical protein PSPTO_3980 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|33517005|sp|Q87Y32.1|Y3980_PSESM RecName: Full=Probable transcriptional regulatory protein
PSPTO_3980
gi|28854375|gb|AAO57439.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 248
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K +D +K +FT ++L +A ++GGG DP +N RL +D ++
Sbjct: 2 AGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGG-DPGSNPRLRLALDKALGAN 60
Query: 88 MPMTTIENAI 97
M TI+ A+
Sbjct: 61 MTRDTIDRAV 70
>gi|373851213|ref|ZP_09594014.1| UPF0082 protein yeeN [Opitutaceae bacterium TAV5]
gi|372477378|gb|EHP37387.1| UPF0082 protein yeeN [Opitutaceae bacterium TAV5]
Length = 240
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGH+KW ++ KA D K +F+ LS+ + LA K GGG DP N RL + + ++++
Sbjct: 2 AGHNKWSKVKRQKAVTDARKGKVFSRLSRDITLAAKAGGG-DPEGNARLRTLLAKAREAN 60
Query: 88 MPMTTIENAIK 98
MP ++ A+K
Sbjct: 61 MPADNVDRAVK 71
>gi|387824732|ref|YP_005824203.1| hypothetical protein FN3523_1149 [Francisella cf. novicida 3523]
gi|332184198|gb|AEE26452.1| hypothetical protein FN3523_1149 [Francisella cf. novicida 3523]
Length = 248
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L +++ +A + GGG D + N RL + I ++
Sbjct: 2 AGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGG-DKDANPRLRAAIATALANN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY 109
M TIE A+ +S NV E Y GY
Sbjct: 61 MSKDTIERAVVKGVGGDESANVEEVRYEGY 90
>gi|347753050|ref|YP_004860615.1| hypothetical protein Bcoa_2659 [Bacillus coagulans 36D1]
gi|347585568|gb|AEP01835.1| protein of unknown function DUF28 [Bacillus coagulans 36D1]
Length = 239
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW+NI+ K A+D ++ +F L+K++ +A K G DP N L I+ K ++
Sbjct: 2 SGHSKWKNIQGRKNAQDAKRGKIFQKLAKEIYVAAK--NGPDPEANSSLRLVIEKAKAAN 59
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRF 144
MP I+ AI+ + +N Y E++ + P + +L + ++ RV F
Sbjct: 60 MPNDNIKRAIEKASGSQNAEHYEEITYEGYGPGGVAVMVTALTDNKNRTASNVRVAF 116
>gi|350559538|ref|ZP_08928378.1| protein of unknown function DUF28 [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349781806|gb|EGZ36089.1| protein of unknown function DUF28 [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 246
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H K A+D ++ LFT L +++ +A + GG DP +N RL D ++
Sbjct: 2 AGHSKWANIQHRKNAQDAKRGKLFTKLIREITVAAR-AGGADPASNPRLRLATDKALAAN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVR 143
M TI+ A K Y E+ + P G+A LV M+ R
Sbjct: 61 MTRDTIDRAAKRGAGAMEGDAYEEVRYEGYGPG----------GAAILVDCMTDNR 106
>gi|448242554|ref|YP_007406607.1| hypothetical protein, UPF0082 family [Serratia marcescens WW4]
gi|445212918|gb|AGE18588.1| hypothetical protein, UPF0082 family [Serratia marcescens WW4]
gi|453065269|gb|EMF06232.1| hypothetical protein F518_09243 [Serratia marcescens VGH107]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP++N RL + +D ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDSNPRLRAAMDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTMNRAI 70
>gi|440231175|ref|YP_007344968.1| DNA-binding regulatory protein, YebC/PmpR family [Serratia
marcescens FGI94]
gi|440052880|gb|AGB82783.1| DNA-binding regulatory protein, YebC/PmpR family [Serratia
marcescens FGI94]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW N +H KAA+D ++ +FT + ++L A K GGG DP++N RL + +D ++
Sbjct: 2 AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGG-DPDSNPRLRAAMDKALSNN 60
Query: 88 MPMTTIENAI 97
M T+ AI
Sbjct: 61 MTRDTMNRAI 70
>gi|381165514|ref|ZP_09874744.1| DNA-binding regulatory protein, YebC/PmpR family
[Saccharomonospora azurea NA-128]
gi|418463641|ref|ZP_13034637.1| hypothetical protein SZMC14600_21778 [Saccharomonospora azurea
SZMC 14600]
gi|359732124|gb|EHK81145.1| hypothetical protein SZMC14600_21778 [Saccharomonospora azurea
SZMC 14600]
gi|379257419|gb|EHY91345.1| DNA-binding regulatory protein, YebC/PmpR family
[Saccharomonospora azurea NA-128]
Length = 249
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW +H KAA D ++ LF L K +++A + GGG DP N L I KK+S
Sbjct: 2 AGHSKWATTKHKKAALDAKRGKLFAKLIKNIEVAARTGGG-DPEGNPTLYDAIQKAKKNS 60
Query: 88 MPMTTIENAIK 98
+P IE A K
Sbjct: 61 VPQDNIERARK 71
>gi|118497619|ref|YP_898669.1| hypothetical protein FTN_1028 [Francisella novicida U112]
gi|195536320|ref|ZP_03079327.1| conserved hypothetical protein [Francisella novicida FTE]
gi|166228361|sp|A0Q6Q0.1|Y1028_FRATN RecName: Full=Probable transcriptional regulatory protein FTN_1028
gi|118423525|gb|ABK89915.1| conserved protein of unknown function [Francisella novicida U112]
gi|194372797|gb|EDX27508.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
Length = 248
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSKW NI+H KA +D ++ +FT L +++ +A + GGG D + N RL + I ++
Sbjct: 2 AGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGG-DKDANPRLRAAIATALANN 60
Query: 88 MPMTTIENAI-------KSCNVPENIY-GY 109
M TIE A+ +S NV E Y GY
Sbjct: 61 MSKDTIERAVVKGAGGDESANVEEVRYEGY 90
>gi|386866994|ref|YP_006279988.1| hypothetical protein BANAN_04065 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385701077|gb|AFI63025.1| hypothetical protein BANAN_04065 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
Length = 251
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW +H KAA D ++ LF L K +++A ++GGG DP+ N L I KK+S
Sbjct: 2 SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARQGGG-DPDGNPALYDAIYKAKKAS 60
Query: 88 MPMTTIENAI 97
MP I+ A+
Sbjct: 61 MPADNIKRAV 70
>gi|374314837|ref|YP_005061265.1| DNA-binding regulatory protein, YebC/PmpR family [Sphaerochaeta
pleomorpha str. Grapes]
gi|359350481|gb|AEV28255.1| DNA-binding regulatory protein, YebC/PmpR family [Sphaerochaeta
pleomorpha str. Grapes]
Length = 249
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
+GHSKW I+H K D ++ FT L K++ +A K GG+DP+TN RL + + + +
Sbjct: 2 SGHSKWATIKHKKGIADAKRGQKFTKLIKEISVAAK-MGGSDPDTNARLRTAVLKARAEN 60
Query: 88 MPMTTIENAIKSCNVPENIYGYLELSCLPWKP 119
MP I+ AIK Y EL+ + P
Sbjct: 61 MPKDNIDRAIKKGAGELGTSVYYELTYEGYAP 92
>gi|334142841|ref|YP_004536049.1| hypothetical protein [Novosphingobium sp. PP1Y]
gi|359399303|ref|ZP_09192307.1| hypothetical protein NSU_1993 [Novosphingobium pentaromativorans
US6-1]
gi|333940873|emb|CCA94231.1| conserved hypothetical protein [Novosphingobium sp. PP1Y]
gi|357599343|gb|EHJ61057.1| hypothetical protein NSU_1993 [Novosphingobium pentaromativorans
US6-1]
Length = 247
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 28 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKEGGGTDPNTNYRLASTIDYCKKSS 87
AGHSK++NI H K A+D++++ +F+ LS+++ +A K G DP+ N RL + ++ K S
Sbjct: 2 AGHSKFKNIMHRKGAQDKKRSAMFSKLSREITVAAKM-GMPDPDMNPRLRAAVNAAKAQS 60
Query: 88 MPMTTIENAIK--SCNVPENIYGYLELSCLPWKPTLSIARLVSLEGSACLVSAMSRVRFP 145
MP I+ AI S N EN Y E+ + P G A +V A++ R
Sbjct: 61 MPKDNIQRAIDKASKNDGEN---YEEVRYEGYGPG----------GVALIVEALTDNRNR 107
Query: 146 PSANF 150
+ N
Sbjct: 108 TATNV 112
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,303,147,131
Number of Sequences: 23463169
Number of extensions: 123378155
Number of successful extensions: 267123
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2593
Number of HSP's successfully gapped in prelim test: 1058
Number of HSP's that attempted gapping in prelim test: 262178
Number of HSP's gapped (non-prelim): 3696
length of query: 208
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 72
effective length of database: 9,168,204,383
effective search space: 660110715576
effective search space used: 660110715576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)