BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6521
(83 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2RYT9|TACO1_RAT Translational activator of cytochrome c oxidase 1 OS=Rattus
norvegicus GN=Taco1 PE=2 SV=1
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 35 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
V +AGH+KW +RHIK KD E++ +F+ L+ ++LAVK
Sbjct: 52 VAFAGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVK 90
>sp|Q0C5U8|Y161_HYPNA Probable transcriptional regulatory protein HNE_0161
OS=Hyphomonas neptunium (strain ATCC 15444) GN=HNE_0161
PE=3 SV=1
Length = 252
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K +D+++A LF LSK++ +A K+
Sbjct: 2 AGHSKWANIQHRKGKQDKKRAVLFARLSKEITVASKM 38
>sp|Q8K0Z7|TACO1_MOUSE Translational activator of cytochrome c oxidase 1 OS=Mus musculus
GN=Taco1 PE=2 SV=1
Length = 294
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGH+KW +RHIK KD E++ +F+ L+ ++LAVK
Sbjct: 55 AGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVK 90
>sp|B8CXG6|Y1235_HALOH Probable transcriptional regulatory protein Hore_12350
OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM
9562) GN=Hore_12350 PE=3 SV=1
Length = 253
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHSKW NI+H KA +D+++ LF+ LSK + +A +
Sbjct: 2 AGHSKWANIKHKKAKEDRKRGKLFSKLSKMITVAAR 37
>sp|Q8RIE0|Y1661_FUSNN Probable transcriptional regulatory protein FN1661
OS=Fusobacterium nucleatum subsp. nucleatum (strain
ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=FN1661 PE=3 SV=1
Length = 249
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
+GHSKW NI+H K A+D+++A LFT ++L +A K
Sbjct: 2 SGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAK 37
>sp|B2A5L8|Y1800_NATTJ Probable transcriptional regulatory protein Nther_1800
OS=Natranaerobius thermophilus (strain ATCC BAA-1301 /
DSM 18059 / JW/NM-WN-LF) GN=Nther_1800 PE=3 SV=1
Length = 250
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHSKW NI+H KA D+++ LF+ LSK++ +A K
Sbjct: 2 AGHSKWANIKHKKARVDEKRGKLFSKLSKEIIVAAK 37
>sp|B3GY39|Y1210_ACTP7 Probable transcriptional regulatory protein APP7_1210
OS=Actinobacillus pleuropneumoniae serotype 7 (strain
AP76) GN=APP7_1210 PE=3 SV=1
Length = 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDV 43
>sp|B0BQ92|Y1171_ACTPJ Probable transcriptional regulatory protein APJL_1171
OS=Actinobacillus pleuropneumoniae serotype 3 (strain
JL03) GN=APJL_1171 PE=3 SV=1
Length = 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDV 43
>sp|A3N1F5|Y1151_ACTP2 Probable transcriptional regulatory protein APL_1151
OS=Actinobacillus pleuropneumoniae serotype 5b (strain
L20) GN=APL_1151 PE=3 SV=1
Length = 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDV 43
>sp|Q7VNF3|Y596_HAEDU Probable transcriptional regulatory protein HD_0596
OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724)
GN=HD_0596 PE=3 SV=1
Length = 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDV 43
>sp|A5UGD1|Y4390_HAEIG Probable transcriptional regulatory protein CGSHiGG_04390
OS=Haemophilus influenzae (strain PittGG)
GN=CGSHiGG_04390 PE=3 SV=1
Length = 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDV 43
>sp|Q4QNM3|Y433_HAEI8 Probable transcriptional regulatory protein NTHI0433
OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0433
PE=3 SV=1
Length = 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDV 43
>sp|P44634|Y315_HAEIN Probable transcriptional regulatory protein HI_0315
OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=HI_0315 PE=1 SV=1
Length = 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDV 43
>sp|A5UAH5|Y1480_HAEIE Probable transcriptional regulatory protein CGSHiEE_01480
OS=Haemophilus influenzae (strain PittEE)
GN=CGSHiEE_01480 PE=3 SV=1
Length = 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDV 43
>sp|Q0VRK0|Y750_ALCBS Probable transcriptional regulatory protein ABO_0750
OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 /
DSM 11573) GN=ABO_0750 PE=3 SV=1
Length = 247
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H KAA+D ++ +FT L ++L +A K+
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKM 38
>sp|Q65UP3|Y710_MANSM Probable transcriptional regulatory protein MS0710 OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=MS0710 PE=3 SV=1
Length = 247
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H KAA+D ++ +FT L ++L A K+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKI 38
>sp|A6VQA7|Y1803_ACTSZ Probable transcriptional regulatory protein Asuc_1803
OS=Actinobacillus succinogenes (strain ATCC 55618 /
130Z) GN=Asuc_1803 PE=3 SV=1
Length = 247
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H KAA+D ++ +FT L ++L A K+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKI 38
>sp|Q0ALW8|Y2433_MARMM Probable transcriptional regulatory protein Mmar10_2433
OS=Maricaulis maris (strain MCS10) GN=Mmar10_2433 PE=3
SV=1
Length = 253
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K +D+ ++ LF+ LSK++ +A K+
Sbjct: 2 AGHSKWANIQHRKGRQDKLRSKLFSRLSKEISIAAKL 38
>sp|Q3A233|Y2335_PELCD Probable transcriptional regulatory protein Pcar_2335
OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
GN=Pcar_2335 PE=3 SV=1
Length = 248
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K A+D ++ +FT L K++ +A K+
Sbjct: 2 AGHSKWANIKHRKGAQDAKRGKIFTKLIKEITVAAKI 38
>sp|Q9CM61|Y980_PASMU Probable transcriptional regulatory protein PM0980 OS=Pasteurella
multocida (strain Pm70) GN=PM0980 PE=3 SV=1
Length = 246
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDV 43
>sp|Q0I244|Y508_HAES1 Probable transcriptional regulatory protein HS_0508
OS=Haemophilus somnus (strain 129Pt) GN=HS_0508 PE=3
SV=1
Length = 246
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDV 43
>sp|B0UVY2|Y1763_HAES2 Probable transcriptional regulatory protein HSM_1763
OS=Haemophilus somnus (strain 2336) GN=HSM_1763 PE=3
SV=1
Length = 246
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKVTHQYV 79
AGHSKW NI+H KAA+D ++ +FT L ++L A K+ V
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDV 43
>sp|Q9BSH4|TACO1_HUMAN Translational activator of cytochrome c oxidase 1 OS=Homo sapiens
GN=TACO1 PE=1 SV=1
Length = 297
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGH+KW +RHIK KD E++ +F+ L ++LAVK
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVK 93
>sp|Q8KBW7|Y1665_CHLTE Probable transcriptional regulatory protein CT1665 OS=Chlorobium
tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN=CT1665
PE=3 SV=1
Length = 251
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
+GHSKW I+ KAA DQ++ +LFT L K++ +A K+
Sbjct: 2 SGHSKWATIKRKKAATDQKRGSLFTKLVKEITIAAKM 38
>sp|B8F5G8|Y943_HAEPS Probable transcriptional regulatory protein HAPS_0943
OS=Haemophilus parasuis serovar 5 (strain SH0165)
GN=HAPS_0943 PE=3 SV=1
Length = 246
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H KAA+D ++ +FT L ++L A K+
Sbjct: 2 AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKL 38
>sp|Q0AX12|Y1435_SYNWW Probable transcriptional regulatory protein Swol_1435
OS=Syntrophomonas wolfei subsp. wolfei (strain
Goettingen) GN=Swol_1435 PE=3 SV=1
Length = 251
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHSKW NI+H KA D+++ FT ++K++ +AV+
Sbjct: 2 AGHSKWANIKHKKARSDEKRGKEFTKIAKEITIAVR 37
>sp|Q2Y5G2|Y2722_NITMU Probable transcriptional regulatory protein Nmul_A2722
OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849) GN=Nmul_A2722 PE=3 SV=1
Length = 240
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H KAA+D ++ +FT L K++ +A ++
Sbjct: 2 AGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARL 38
>sp|A8LJ00|Y2762_DINSH Probable transcriptional regulatory protein Dshi_2762
OS=Dinoroseobacter shibae (strain DFL 12) GN=Dshi_2762
PE=3 SV=1
Length = 246
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K +D+ +A LF+ LSK++ +A K+
Sbjct: 2 AGHSKWANIQHRKGRQDKLRAKLFSKLSKEITVAAKM 38
>sp|Q0AJA6|Y281_NITEC Probable transcriptional regulatory protein Neut_0281
OS=Nitrosomonas eutropha (strain C91) GN=Neut_0281 PE=3
SV=1
Length = 241
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H KAA+D ++ +FT L K++ +A ++
Sbjct: 2 AGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARL 38
>sp|Q82XP6|Y210_NITEU Probable transcriptional regulatory protein NE0210
OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC
14298) GN=NE0210 PE=3 SV=1
Length = 241
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H KAA+D ++ +FT L K++ +A ++
Sbjct: 2 AGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARL 38
>sp|B3QLZ4|Y525_CHLP8 Probable transcriptional regulatory protein Cpar_0525
OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0525
PE=3 SV=1
Length = 251
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
+GHSKW I+ KAA DQ++ LFT L K++ +A K+
Sbjct: 2 SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKM 38
>sp|Q3AU82|Y165_CHLCH Probable transcriptional regulatory protein Cag_0165
OS=Chlorobium chlorochromatii (strain CaD3) GN=Cag_0165
PE=3 SV=2
Length = 250
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
+GHSKW I+ KAA DQ++ LFT L K++ +A K+
Sbjct: 2 SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKM 38
>sp|Q28LW5|Y3380_JANSC Probable transcriptional regulatory protein Jann_3380
OS=Jannaschia sp. (strain CCS1) GN=Jann_3380 PE=3 SV=1
Length = 255
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K +D+ +A +F+ +SK++ +A K+
Sbjct: 2 AGHSKWANIQHRKGRQDKLRAKVFSKMSKEITVAAKM 38
>sp|A1BDW8|Y538_CHLPD Probable transcriptional regulatory protein Cpha266_0538
OS=Chlorobium phaeobacteroides (strain DSM 266)
GN=Cpha266_0538 PE=3 SV=1
Length = 250
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
+GHSKW I+ KAA DQ++ LFT L K++ +A K+
Sbjct: 2 SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKM 38
>sp|B7IHX7|Y1246_THEAB Probable transcriptional regulatory protein THA_1246
OS=Thermosipho africanus (strain TCF52B) GN=THA_1246
PE=3 SV=1
Length = 252
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
+GH+KW NI+H KAA+D +K+ +FT L +++ +A K
Sbjct: 2 SGHNKWANIKHRKAAQDAKKSKIFTKLIREIIVAAK 37
>sp|Q168H2|Y2018_ROSDO Probable transcriptional regulatory protein RD1_2018
OS=Roseobacter denitrificans (strain ATCC 33942 / OCh
114) GN=RD1_2018 PE=3 SV=1
Length = 246
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K +D +A LF+ LSK++ +A K+
Sbjct: 2 AGHSKWANIQHRKGRQDAVRAKLFSKLSKEITVAAKM 38
>sp|B8FQV9|Y3629_DESHD Probable transcriptional regulatory protein Dhaf_3629
OS=Desulfitobacterium hafniense (strain DCB-2 / DSM
10664) GN=Dhaf_3629 PE=3 SV=1
Length = 252
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
+GHSKW NI+H KA D +K +FT L ++L +A +
Sbjct: 2 SGHSKWANIKHKKAKADAQKGKIFTKLGRELIVAAR 37
>sp|Q24UN3|Y2470_DESHY Probable transcriptional regulatory protein DSY2470
OS=Desulfitobacterium hafniense (strain Y51) GN=DSY2470
PE=3 SV=1
Length = 252
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
+GHSKW NI+H KA D +K +FT L ++L +A +
Sbjct: 2 SGHSKWANIKHKKAKADAQKGKIFTKLGRELIVAAR 37
>sp|Q1GFE0|Y1893_RUEST Probable transcriptional regulatory protein TM1040_1893
OS=Ruegeria sp. (strain TM1040) GN=TM1040_1893 PE=3
SV=2
Length = 246
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K +D ++ LF+ LSK++ +A K+
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKLSKEITVAAKM 38
>sp|A0L4W1|Y479_MAGSM Probable transcriptional regulatory protein Mmc1_0479
OS=Magnetococcus sp. (strain MC-1) GN=Mmc1_0479 PE=3
SV=1
Length = 250
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K A+D ++ +FT L K++ ++ ++
Sbjct: 2 AGHSKWANIKHRKGAQDAKRGKIFTRLIKEITVSARM 38
>sp|A1AW54|Y394_RUTMC Probable transcriptional regulatory protein Rmag_0394 OS=Ruthia
magnifica subsp. Calyptogena magnifica GN=Rmag_0394
PE=3 SV=1
Length = 246
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K A+D ++ +FT L K++ ++ K+
Sbjct: 2 AGHSKWHNIQHRKGAQDAKRGKIFTKLIKEIVISAKI 38
>sp|B4S5F5|Y496_PROA2 Probable transcriptional regulatory protein Paes_0496
OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413)
GN=Paes_0496 PE=3 SV=1
Length = 250
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
+GHSKW I+ KAA DQ++ LFT L +++ +A K+
Sbjct: 2 SGHSKWSTIKRKKAATDQKRGNLFTKLVREITIAAKM 38
>sp|A5FS26|Y421_DEHSB Probable transcriptional regulatory protein DehaBAV1_0421
OS=Dehalococcoides sp. (strain BAV1) GN=DehaBAV1_0421
PE=3 SV=1
Length = 251
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
+GHSKW I+H K A D ++ LFT LS+++ A K
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKLSREIIFAAK 37
>sp|Q2SCK9|Y4926_HAHCH Probable transcriptional regulatory protein HCH_04926 OS=Hahella
chejuensis (strain KCTC 2396) GN=HCH_04926 PE=3 SV=1
Length = 248
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHSKW NI+H KA++D ++ +FT L +++ +A K
Sbjct: 2 AGHSKWANIKHRKASQDAKRGKIFTKLIREITVAAK 37
>sp|Q4A9L4|Y471_MYCHJ Probable transcriptional regulatory protein MHJ_0471
OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 /
NCTC 10110) GN=MHJ_0471 PE=3 SV=1
Length = 242
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAV 72
AGHSKW NI+H K A+D KA +F SK++ +AV
Sbjct: 2 AGHSKWANIKHRKGAQDALKAKIFNKFSKEIMVAV 36
>sp|Q4A7P8|Y474_MYCH7 Probable transcriptional regulatory protein MHP7448_0474
OS=Mycoplasma hyopneumoniae (strain 7448)
GN=MHP7448_0474 PE=3 SV=1
Length = 242
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAV 72
AGHSKW NI+H K A+D KA +F SK++ +AV
Sbjct: 2 AGHSKWANIKHRKGAQDALKAKIFNKFSKEIMVAV 36
>sp|Q9RGC3|Y472_MYCH2 Probable transcriptional regulatory protein mhp472 OS=Mycoplasma
hyopneumoniae (strain 232) GN=mhp472 PE=3 SV=2
Length = 242
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAV 72
AGHSKW NI+H K A+D KA +F SK++ +AV
Sbjct: 2 AGHSKWANIKHRKGAQDALKAKIFNKFSKEIMVAV 36
>sp|B4SDW5|Y657_PELPB Probable transcriptional regulatory protein Ppha_0657
OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 /
BU-1) GN=Ppha_0657 PE=3 SV=1
Length = 250
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
+GHSKW I+ KA DQ++ +LFT L K++ +A K+
Sbjct: 2 SGHSKWATIKRKKAVTDQKRGSLFTKLVKEITIAAKM 38
>sp|B0TF65|Y1757_HELMI Probable transcriptional regulatory protein Helmi_17570
OS=Heliobacterium modesticaldum (strain ATCC 51547 /
Ice1) GN=Helmi_17570 PE=3 SV=1
Length = 255
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHSKW NI+H KA D +K +FT + ++L +A +
Sbjct: 2 AGHSKWANIKHRKAKVDAQKGKIFTKIGRELIVAAR 37
>sp|B8GUJ7|Y2237_THISH Probable transcriptional regulatory protein Tgr7_2237
OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=Tgr7_2237
PE=3 SV=1
Length = 249
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K A+D ++ LFT L K++ +A ++
Sbjct: 2 AGHSKWANIQHRKNAQDAKRGKLFTKLIKEITVAARM 38
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.129 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,454,444
Number of Sequences: 539616
Number of extensions: 731722
Number of successful extensions: 2439
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1854
Number of HSP's gapped (non-prelim): 585
length of query: 83
length of database: 191,569,459
effective HSP length: 54
effective length of query: 29
effective length of database: 162,430,195
effective search space: 4710475655
effective search space used: 4710475655
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)