Your job contains 1 sequence.
>psy6521
MNSAFRCIQSKNPCKLAFSLNVAKINSNILSTIPVRYAGHSKWQNIRHIKAAKDQEKATL
FTNLSKKLKLAVKVTHQYVVLPN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6521
(83 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1306784 - symbol:Taco1 "translational activator of mi... 116 1.5e-06 1
UNIPROTKB|F1RRW7 - symbol:TACO1 "Uncharacterized protein"... 113 3.3e-06 1
UNIPROTKB|E1BJK7 - symbol:TACO1 "Uncharacterized protein"... 112 4.3e-06 1
CGD|CAL0002610 - symbol:orf19.805 species:5476 "Candida a... 111 5.1e-06 1
UNIPROTKB|Q5AHJ1 - symbol:CaO19.805 "Putative uncharacter... 111 5.1e-06 1
MGI|MGI:1917457 - symbol:Taco1 "translational activator o... 110 7.0e-06 1
UNIPROTKB|Q0C5U8 - symbol:HNE_0161 "Probable transcriptio... 106 1.4e-05 1
UNIPROTKB|E2RFJ8 - symbol:TACO1 "Uncharacterized protein"... 107 1.5e-05 1
UNIPROTKB|Q9BSH4 - symbol:TACO1 "Translational activator ... 106 2.0e-05 1
UNIPROTKB|P0A8A0 - symbol:yebC "conserved protein" specie... 100 6.2e-05 1
UNIPROTKB|Q83BE4 - symbol:CBU_1566 "Probable transcriptio... 98 0.00010 1
TIGR_CMR|CBU_1566 - symbol:CBU_1566 "conserved hypothetic... 98 0.00010 1
UNIPROTKB|Q8EEF0 - symbol:SO_2432 "Probable transcription... 98 0.00010 1
TIGR_CMR|SO_2432 - symbol:SO_2432 "conserved hypothetical... 98 0.00010 1
UNIPROTKB|Q5LUI2 - symbol:SPO1072 "Probable transcription... 97 0.00013 1
TIGR_CMR|SPO_1072 - symbol:SPO_1072 "conserved hypothetic... 97 0.00013 1
UNIPROTKB|Q609L3 - symbol:MCA1220 "Probable transcription... 96 0.00017 1
UNIPROTKB|Q3Z9B1 - symbol:DET0444 "Probable transcription... 96 0.00018 1
TIGR_CMR|DET_0444 - symbol:DET_0444 "conserved hypothetic... 96 0.00018 1
UNIPROTKB|P62036 - symbol:GSU1074 "Probable transcription... 95 0.00022 1
TIGR_CMR|GSU_1074 - symbol:GSU_1074 "conserved hypothetic... 95 0.00022 1
UNIPROTKB|Q2GKM2 - symbol:APH_0480 "Probable transcriptio... 91 0.00061 1
TIGR_CMR|APH_0480 - symbol:APH_0480 "conserved hypothetic... 91 0.00061 1
UNIPROTKB|Q48FC2 - symbol:PSPPH_3775 "Probable transcript... 90 0.00081 1
UNIPROTKB|Q87Y32 - symbol:PSPTO_3980 "Probable transcript... 90 0.00081 1
>RGD|1306784 [details] [associations]
symbol:Taco1 "translational activator of mitochondrially encoded
cytochrome c oxidase I" species:10116 "Rattus norvegicus"
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006417
"regulation of translation" evidence=IEA] RGD:1306784 GO:GO:0005739
GO:GO:0006417 EMBL:CH473948 Gene3D:1.10.10.200 InterPro:IPR017856
CTD:51204 Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 EMBL:BC166900 IPI:IPI00195878 RefSeq:NP_001101772.1
UniGene:Rn.137785 ProteinModelPortal:B2RYT9 GeneID:360645
KEGG:rno:360645 UCSC:RGD:1306784 NextBio:673599 Uniprot:B2RYT9
Length = 295
Score = 116 (45.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 35 VRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
V +AGH+KW +RHIK KD E++ +F+ L+ ++LAVK
Sbjct: 52 VAFAGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVK 90
>UNIPROTKB|F1RRW7 [details] [associations]
symbol:TACO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] HAMAP:MF_00693
GO:GO:0005739 Gene3D:1.10.10.200 InterPro:IPR017856 OMA:PDGNPTL
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 GeneTree:ENSGT00390000012820 EMBL:CU929939
Ensembl:ENSSSCT00000018825 Uniprot:F1RRW7
Length = 294
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 28 NILSTIPVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
++ + +P AGH+KW +RHIK KD E++ +F+ LS ++LAVK
Sbjct: 48 HVTAAVP---AGHNKWSKVRHIKGPKDTERSRIFSKLSLSIRLAVK 90
>UNIPROTKB|E1BJK7 [details] [associations]
symbol:TACO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] HAMAP:MF_00693
GO:GO:0005739 Gene3D:1.10.10.200 InterPro:IPR017856 CTD:51204
OMA:PDGNPTL Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 GeneTree:ENSGT00390000012820
EMBL:DAAA02049321 IPI:IPI00694593 RefSeq:NP_001192540.1
UniGene:Bt.112060 ProteinModelPortal:E1BJK7
Ensembl:ENSBTAT00000013031 GeneID:507536 KEGG:bta:507536
NextBio:20868111 Uniprot:E1BJK7
Length = 297
Score = 112 (44.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGH+KW +RHIK KD E++ +F+ LS ++LAVK
Sbjct: 58 AGHNKWSKVRHIKGPKDAERSRIFSKLSLSIRLAVK 93
>CGD|CAL0002610 [details] [associations]
symbol:orf19.805 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 CGD:CAL0002610 EMBL:AACQ01000019 EMBL:AACQ01000018
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 RefSeq:XP_720929.1 RefSeq:XP_721049.1
ProteinModelPortal:Q5AHJ1 STRING:Q5AHJ1 GeneID:3637216
GeneID:3637331 KEGG:cal:CaO19.805 KEGG:cal:CaO19.8423
Uniprot:Q5AHJ1
Length = 285
Score = 111 (44.1 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 19 SLNVAKINSNILSTIPVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
S + N+N+ T+ VR+AGHSKWQNIRH KA D K+ T +S +++ V+V
Sbjct: 10 STRIRGANTNL--TL-VRFAGHSKWQNIRHDKAKNDARKSKEATLISGRIESCVRV 62
>UNIPROTKB|Q5AHJ1 [details] [associations]
symbol:CaO19.805 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 CGD:CAL0002610 EMBL:AACQ01000019
EMBL:AACQ01000018 Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 RefSeq:XP_720929.1
RefSeq:XP_721049.1 ProteinModelPortal:Q5AHJ1 STRING:Q5AHJ1
GeneID:3637216 GeneID:3637331 KEGG:cal:CaO19.805
KEGG:cal:CaO19.8423 Uniprot:Q5AHJ1
Length = 285
Score = 111 (44.1 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 19 SLNVAKINSNILSTIPVRYAGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
S + N+N+ T+ VR+AGHSKWQNIRH KA D K+ T +S +++ V+V
Sbjct: 10 STRIRGANTNL--TL-VRFAGHSKWQNIRHDKAKNDARKSKEATLISGRIESCVRV 62
>MGI|MGI:1917457 [details] [associations]
symbol:Taco1 "translational activator of mitochondrially
encoded cytochrome c oxidase I" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1917457 GO:GO:0005739 GO:GO:0006417
EMBL:AL596331 Gene3D:1.10.10.200 InterPro:IPR017856 CTD:51204
eggNOG:COG0217 HOGENOM:HOG000228370 OMA:PDGNPTL OrthoDB:EOG4D26QM
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 EMBL:AK010072 EMBL:AK047078 EMBL:AK140143
EMBL:AK167963 EMBL:BC029182 IPI:IPI00137601 RefSeq:NP_081622.1
UniGene:Mm.343857 ProteinModelPortal:Q8K0Z7 SMR:Q8K0Z7
STRING:Q8K0Z7 PhosphoSite:Q8K0Z7 PaxDb:Q8K0Z7 PRIDE:Q8K0Z7
Ensembl:ENSMUST00000002048 GeneID:70207 KEGG:mmu:70207
UCSC:uc007lyb.1 GeneTree:ENSGT00390000012820 InParanoid:Q3TI86
NextBio:331168 Bgee:Q8K0Z7 CleanEx:MM_CCDC44 Genevestigator:Q8K0Z7
Uniprot:Q8K0Z7
Length = 294
Score = 110 (43.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGH+KW +RHIK KD E++ +F+ L+ ++LAVK
Sbjct: 55 AGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVK 90
>UNIPROTKB|Q0C5U8 [details] [associations]
symbol:HNE_0161 "Probable transcriptional regulatory
protein HNE_0161" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000158 GenomeReviews:CP000158_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
TIGRFAMs:TIGR01033 RefSeq:YP_758895.1 ProteinModelPortal:Q0C5U8
STRING:Q0C5U8 GeneID:4287459 KEGG:hne:HNE_0161 PATRIC:32213110
BioCyc:HNEP228405:GI69-208-MONOMER Uniprot:Q0C5U8
Length = 252
Score = 106 (42.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K +D+++A LF LSK++ +A K+
Sbjct: 2 AGHSKWANIQHRKGKQDKKRAVLFARLSKEITVASKM 38
>UNIPROTKB|E2RFJ8 [details] [associations]
symbol:TACO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0005739 Gene3D:1.10.10.200 InterPro:IPR017856
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 GeneTree:ENSGT00390000012820 OMA:NAKAENM
EMBL:AAEX03006356 RefSeq:XP_003639299.1 ProteinModelPortal:E2RFJ8
Ensembl:ENSCAFT00000020545 GeneID:100856685 KEGG:cfa:100856685
NextBio:20896251 Uniprot:E2RFJ8
Length = 298
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGH+KW +RHIK KD E++ +F+ L ++LAVK
Sbjct: 59 AGHNKWSKVRHIKGPKDAERSRIFSKLCLSIRLAVK 94
>UNIPROTKB|Q9BSH4 [details] [associations]
symbol:TACO1 "Translational activator of cytochrome c
oxidase 1" species:9606 "Homo sapiens" [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] GO:GO:0005739 GO:GO:0006417 EMBL:CH471109 MIM:256000
Orphanet:70474 Gene3D:1.10.10.200 InterPro:IPR017856 EMBL:AK315375
EMBL:BC005049 EMBL:BC007744 EMBL:AL833861 EMBL:AF090929
IPI:IPI00019903 RefSeq:NP_057444.2 UniGene:Hs.174134
ProteinModelPortal:Q9BSH4 SMR:Q9BSH4 IntAct:Q9BSH4
MINT:MINT-1460586 STRING:Q9BSH4 PhosphoSite:Q9BSH4 DMDM:33516968
PaxDb:Q9BSH4 PeptideAtlas:Q9BSH4 PRIDE:Q9BSH4 DNASU:51204
Ensembl:ENST00000258975 GeneID:51204 KEGG:hsa:51204 UCSC:uc002jbd.3
CTD:51204 GeneCards:GC17P061678 HGNC:HGNC:24316 HPA:HPA021626
HPA:HPA021643 HPA:HPA024294 MIM:612958 neXtProt:NX_Q9BSH4
PharmGKB:PA165433031 eggNOG:COG0217 HOGENOM:HOG000228370
InParanoid:Q9BSH4 OMA:PDGNPTL OrthoDB:EOG4D26QM PhylomeDB:Q9BSH4
GenomeRNAi:51204 NextBio:54250 ArrayExpress:Q9BSH4 Bgee:Q9BSH4
CleanEx:HS_CCDC44 Genevestigator:Q9BSH4 GermOnline:ENSG00000136463
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 Uniprot:Q9BSH4
Length = 297
Score = 106 (42.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGH+KW +RHIK KD E++ +F+ L ++LAVK
Sbjct: 58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVK 93
>UNIPROTKB|P0A8A0 [details] [associations]
symbol:yebC "conserved protein" species:83333 "Escherichia
coli K-12" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_00693 GO:GO:0005737
GO:GO:0006355 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006351 EMBL:X59551
EMBL:D10165 Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 PIR:C38113
RefSeq:NP_416378.1 RefSeq:YP_490126.1 PDB:1KON PDBsum:1KON
ProteinModelPortal:P0A8A0 SMR:P0A8A0 DIP:DIP-47886N IntAct:P0A8A0
MINT:MINT-1241216 PaxDb:P0A8A0 PRIDE:P0A8A0
EnsemblBacteria:EBESCT00000002866 EnsemblBacteria:EBESCT00000002867
EnsemblBacteria:EBESCT00000017567 GeneID:12932695 GeneID:946379
KEGG:ecj:Y75_p1840 KEGG:eco:b1864 PATRIC:32119051 EchoBASE:EB1127
EcoGene:EG11137 BioCyc:EcoCyc:EG11137-MONOMER
BioCyc:ECOL316407:JW1853-MONOMER EvolutionaryTrace:P0A8A0
Genevestigator:P0A8A0 Uniprot:P0A8A0
Length = 246
Score = 100 (40.3 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW N RH KAA+D ++ +FT + ++L A K+
Sbjct: 2 AGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKL 38
>UNIPROTKB|Q83BE4 [details] [associations]
symbol:CBU_1566 "Probable transcriptional regulatory
protein CBU_1566" species:227377 "Coxiella burnetii RSA 493"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_820549.1 PDB:4F3Q
PDBsum:4F3Q ProteinModelPortal:Q83BE4 SMR:Q83BE4 PRIDE:Q83BE4
GeneID:1209476 KEGG:cbu:CBU_1566 PATRIC:17931895
BioCyc:CBUR227377:GJ7S-1545-MONOMER Uniprot:Q83BE4
Length = 244
Score = 98 (39.6 bits), Expect = 0.00010, P = 0.00010
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H KA +D ++ +FT L +++ +A ++
Sbjct: 2 AGHSKWANIKHAKARQDAKRGKVFTKLIREITVAARL 38
>TIGR_CMR|CBU_1566 [details] [associations]
symbol:CBU_1566 "conserved hypothetical protein TIGR01033"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_820549.1 PDB:4F3Q
PDBsum:4F3Q ProteinModelPortal:Q83BE4 SMR:Q83BE4 PRIDE:Q83BE4
GeneID:1209476 KEGG:cbu:CBU_1566 PATRIC:17931895
BioCyc:CBUR227377:GJ7S-1545-MONOMER Uniprot:Q83BE4
Length = 244
Score = 98 (39.6 bits), Expect = 0.00010, P = 0.00010
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H KA +D ++ +FT L +++ +A ++
Sbjct: 2 AGHSKWANIKHAKARQDAKRGKVFTKLIREITVAARL 38
>UNIPROTKB|Q8EEF0 [details] [associations]
symbol:SO_2432 "Probable transcriptional regulatory protein
SO_2432" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_718022.1
ProteinModelPortal:Q8EEF0 SMR:Q8EEF0 GeneID:1170145
KEGG:son:SO_2432 PATRIC:23524479 Uniprot:Q8EEF0
Length = 248
Score = 98 (39.6 bits), Expect = 0.00010, P = 0.00010
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHSKW NI+H KAA+D ++ LFT ++L ++ +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSAR 37
>TIGR_CMR|SO_2432 [details] [associations]
symbol:SO_2432 "conserved hypothetical protein TIGR01033"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_718022.1
ProteinModelPortal:Q8EEF0 SMR:Q8EEF0 GeneID:1170145
KEGG:son:SO_2432 PATRIC:23524479 Uniprot:Q8EEF0
Length = 248
Score = 98 (39.6 bits), Expect = 0.00010, P = 0.00010
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHSKW NI+H KAA+D ++ LFT ++L ++ +
Sbjct: 2 AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSAR 37
>UNIPROTKB|Q5LUI2 [details] [associations]
symbol:SPO1072 "Probable transcriptional regulatory protein
SPO1072" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 RefSeq:YP_166323.1
ProteinModelPortal:Q5LUI2 SMR:Q5LUI2 GeneID:3195080
KEGG:sil:SPO1072 PATRIC:23375445 OMA:TVMMAAI ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 Uniprot:Q5LUI2
Length = 246
Score = 97 (39.2 bits), Expect = 0.00013, P = 0.00013
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K +D ++ LF+ SK++ +A K+
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKFSKEITVAAKM 38
>TIGR_CMR|SPO_1072 [details] [associations]
symbol:SPO_1072 "conserved hypothetical protein TIGR01033"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 RefSeq:YP_166323.1
ProteinModelPortal:Q5LUI2 SMR:Q5LUI2 GeneID:3195080
KEGG:sil:SPO1072 PATRIC:23375445 OMA:TVMMAAI ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 Uniprot:Q5LUI2
Length = 246
Score = 97 (39.2 bits), Expect = 0.00013, P = 0.00013
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
AGHSKW NI+H K +D ++ LF+ SK++ +A K+
Sbjct: 2 AGHSKWANIQHRKGRQDAARSKLFSKFSKEITVAAKM 38
>UNIPROTKB|Q609L3 [details] [associations]
symbol:MCA1220 "Probable transcriptional regulatory protein
MCA1220" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AE017282 GenomeReviews:AE017282_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217 OMA:PDGNPTL
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 ProtClustDB:PRK00110 TIGRFAMs:TIGR01033
RefSeq:YP_113684.1 ProteinModelPortal:Q609L3 SMR:Q609L3
GeneID:3104302 KEGG:mca:MCA1220 PATRIC:22606274
HOGENOM:HOG000228371 Uniprot:Q609L3
Length = 248
Score = 96 (38.9 bits), Expect = 0.00017, P = 0.00017
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLA 71
AGHSKW NI+H K A+D ++ LFT L +++ +A
Sbjct: 2 AGHSKWANIQHRKGAQDAKRGKLFTKLIREITVA 35
>UNIPROTKB|Q3Z9B1 [details] [associations]
symbol:DET0444 "Probable transcriptional regulatory protein
DET0444" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:YP_181188.1
ProteinModelPortal:Q3Z9B1 SMR:Q3Z9B1 STRING:Q3Z9B1 GeneID:3230215
KEGG:det:DET0444 PATRIC:21607957 BioCyc:DETH243164:GJNF-444-MONOMER
Uniprot:Q3Z9B1
Length = 251
Score = 96 (38.9 bits), Expect = 0.00018, P = 0.00018
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
+GHSKW I+H K A D ++ LFT LS+++ A K
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKLSREIIFAAK 37
>TIGR_CMR|DET_0444 [details] [associations]
symbol:DET_0444 "conserved hypothetical protein TIGR01033"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:YP_181188.1
ProteinModelPortal:Q3Z9B1 SMR:Q3Z9B1 STRING:Q3Z9B1 GeneID:3230215
KEGG:det:DET0444 PATRIC:21607957 BioCyc:DETH243164:GJNF-444-MONOMER
Uniprot:Q3Z9B1
Length = 251
Score = 96 (38.9 bits), Expect = 0.00018, P = 0.00018
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
+GHSKW I+H K A D ++ LFT LS+++ A K
Sbjct: 2 SGHSKWATIKHAKGAADAKRGQLFTKLSREIIFAAK 37
>UNIPROTKB|P62036 [details] [associations]
symbol:GSU1074 "Probable transcriptional regulatory protein
GSU1074" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_952127.1
ProteinModelPortal:P62036 SMR:P62036 GeneID:2688637
KEGG:gsu:GSU1074 PATRIC:22024914
BioCyc:GSUL243231:GH27-1069-MONOMER Uniprot:P62036
Length = 247
Score = 95 (38.5 bits), Expect = 0.00022, P = 0.00022
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
+GH+KW IRH K A D ++ +FT L K++ +A K+
Sbjct: 2 SGHNKWSTIRHKKGAADAKRGKVFTKLIKEITVAAKI 38
>TIGR_CMR|GSU_1074 [details] [associations]
symbol:GSU_1074 "conserved hypothetical protein TIGR01033"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_952127.1
ProteinModelPortal:P62036 SMR:P62036 GeneID:2688637
KEGG:gsu:GSU1074 PATRIC:22024914
BioCyc:GSUL243231:GH27-1069-MONOMER Uniprot:P62036
Length = 247
Score = 95 (38.5 bits), Expect = 0.00022, P = 0.00022
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVKV 74
+GH+KW IRH K A D ++ +FT L K++ +A K+
Sbjct: 2 SGHNKWSTIRHKKGAADAKRGKVFTKLIKEITVAAKI 38
>UNIPROTKB|Q2GKM2 [details] [associations]
symbol:APH_0480 "Probable transcriptional regulatory
protein APH_0480" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 RefSeq:YP_505079.1 ProteinModelPortal:Q2GKM2
STRING:Q2GKM2 GeneID:3930251 KEGG:aph:APH_0480 PATRIC:20949596
OMA:YLFDHVG BioCyc:APHA212042:GHPM-506-MONOMER Uniprot:Q2GKM2
Length = 245
Score = 91 (37.1 bits), Expect = 0.00061, P = 0.00061
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHS++ NI+H K A+D ++A LFT L K++ +A +
Sbjct: 2 AGHSQFANIKHRKGAQDAKRAKLFTKLRKEIIVAAR 37
>TIGR_CMR|APH_0480 [details] [associations]
symbol:APH_0480 "conserved hypothetical protein TIGR01033"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 RefSeq:YP_505079.1 ProteinModelPortal:Q2GKM2
STRING:Q2GKM2 GeneID:3930251 KEGG:aph:APH_0480 PATRIC:20949596
OMA:YLFDHVG BioCyc:APHA212042:GHPM-506-MONOMER Uniprot:Q2GKM2
Length = 245
Score = 91 (37.1 bits), Expect = 0.00061, P = 0.00061
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHS++ NI+H K A+D ++A LFT L K++ +A +
Sbjct: 2 AGHSQFANIKHRKGAQDAKRAKLFTKLRKEIIVAAR 37
>UNIPROTKB|Q48FC2 [details] [associations]
symbol:PSPPH_3775 "Probable transcriptional regulatory
protein PSPPH_3775" species:264730 "Pseudomonas syringae pv.
phaseolicola 1448A" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00693 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:YP_275915.1
ProteinModelPortal:Q48FC2 SMR:Q48FC2 STRING:Q48FC2 GeneID:3558456
KEGG:psp:PSPPH_3775 PATRIC:19976987 Uniprot:Q48FC2
Length = 248
Score = 90 (36.7 bits), Expect = 0.00081, P = 0.00081
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHSKW NI+H K +D +K +FT ++L +A +
Sbjct: 2 AGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAAR 37
>UNIPROTKB|Q87Y32 [details] [associations]
symbol:PSPTO_3980 "Probable transcriptional regulatory
protein PSPTO_3980" species:223283 "Pseudomonas syringae pv. tomato
str. DC3000" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00693 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:AE016853
GenomeReviews:AE016853_GR Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_793744.1
ProteinModelPortal:Q87Y32 SMR:Q87Y32 GeneID:1185656
KEGG:pst:PSPTO_3980 PATRIC:19999437
BioCyc:PSYR223283:GJIX-4045-MONOMER Uniprot:Q87Y32
Length = 248
Score = 90 (36.7 bits), Expect = 0.00081, P = 0.00081
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 38 AGHSKWQNIRHIKAAKDQEKATLFTNLSKKLKLAVK 73
AGHSKW NI+H K +D +K +FT ++L +A +
Sbjct: 2 AGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAAR 37
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.129 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 83 83 0.00091 102 3 11 22 0.39 29
29 0.44 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 530 (56 KB)
Total size of DFA: 104 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.79u 0.13s 8.92t Elapsed: 00:00:00
Total cpu time: 8.79u 0.13s 8.92t Elapsed: 00:00:00
Start: Thu Aug 15 16:04:20 2013 End: Thu Aug 15 16:04:20 2013