Your job contains 1 sequence.
>psy6522
MLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFL
PKICQRLGPLLDKELKPNFPGLKSLLSGGSQSLLRSEKSLAKSVLSSYDYIARQHGTSLL
VPNSVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPL
SRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA
TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE
VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF
LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYY
KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF
NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQ
GEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLF
EPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDTELLPDITTNDDGHVE
IVEGSERNGERPVEVEGQRHYNDHGHVYIQTSHVHVLRSRANGESSAATEGTSPSGTAPT
AQNKNFVKRLPLSQHKIVVERINAFAEIESEEFIKESKKLFDSSTTTQPLVVKKEKKKKV
VRQARTRAEYSEHIQDQYEDPDNLSLSGSEESASDSDQSQVDVSDLCESSSSSGGTSSSD
YSDWIHEGVNLEPPKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYY
PQMGDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPP
RMCCLKLAVMKPNGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMID
DAWWWGTIEGKPSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKEATEPGGSLPVEPE
EIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISSLSEENSHSDS
SSESGSSSQSSEEDSEDEDWTRHGKARRMPPRRTNRVGTSLGRQYRENPSDVSDYDSGDR
YAMRARQSKQVQSVQAGRRGQTIVTSRTRGKQSYNKFSGRGRGRKAPESEDEVEGEEEEE
SNDQSEEEEVEENSEEEEEEEAVPRRRPVRRANVAKVKRAVPPAPDTSTSRLRSVRQNGR
AKRTNGRQSSSLLMTCSGDSDSEDNSQEEEQYGSRRARRTRTKGQSYAVHSSETETESEE
EESQAAQVSFSRRGRMRKPTAKLRGLE
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6522
(1407 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011785 - symbol:BRWD3 "BRWD3" species:7227 "Droso... 1336 1.5e-226 5
MGI|MGI:3029414 - symbol:Brwd3 "bromodomain and WD repeat... 1259 1.6e-209 5
UNIPROTKB|F1N1C9 - symbol:BRWD3 "Uncharacterized protein"... 1236 9.4e-209 5
RGD|1559445 - symbol:Brwd3 "bromodomain and WD repeat dom... 1249 1.5e-207 5
UNIPROTKB|Q6RI45 - symbol:BRWD3 "Bromodomain and WD repea... 1253 4.8e-206 4
UNIPROTKB|F1N8L6 - symbol:BRWD3 "Uncharacterized protein"... 1228 3.8e-202 3
UNIPROTKB|E1BSG1 - symbol:BRWD1 "Uncharacterized protein"... 1238 7.5e-197 4
MGI|MGI:1890651 - symbol:Brwd1 "bromodomain and WD repeat... 1205 3.4e-196 5
ZFIN|ZDB-GENE-050208-261 - symbol:phip "pleckstrin homolo... 1247 4.5e-196 4
UNIPROTKB|F1MPF7 - symbol:PHIP "Uncharacterized protein" ... 1195 1.3e-193 4
RGD|1309030 - symbol:Brwd1 "bromodomain and WD repeat dom... 1192 9.2e-193 4
MGI|MGI:1932404 - symbol:Phip "pleckstrin homology domain... 1196 2.9e-192 4
UNIPROTKB|Q9NSI6 - symbol:BRWD1 "Bromodomain and WD repea... 1211 5.2e-192 3
UNIPROTKB|Q8WWQ0 - symbol:PHIP "PH-interacting protein" s... 1192 2.9e-191 4
UNIPROTKB|F1MTQ0 - symbol:BRWD1 "Uncharacterized protein"... 1214 3.2e-191 2
ZFIN|ZDB-GENE-041111-120 - symbol:brwd1 "bromodomain and ... 1204 9.4e-191 4
UNIPROTKB|F1NXP9 - symbol:PHIP "Uncharacterized protein" ... 1206 1.7e-189 3
TAIR|locus:2061997 - symbol:AT2G47410 "AT2G47410" species... 317 6.8e-62 4
RGD|1564964 - symbol:Phip "pleckstrin homology domain int... 642 1.1e-59 3
TAIR|locus:2158044 - symbol:AT5G49430 "AT5G49430" species... 278 1.8e-58 4
DICTYBASE|DDB_G0285837 - symbol:DDB_G0285837 "BRWD group ... 381 8.8e-37 5
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 187 6.7e-18 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 176 5.2e-17 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 176 9.7e-17 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 176 9.7e-17 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 176 9.7e-17 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 176 9.7e-17 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 176 9.7e-17 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 168 6.2e-16 3
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 177 6.6e-16 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 176 8.4e-16 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 166 3.2e-15 3
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 140 2.0e-14 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 166 2.2e-14 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 202 3.2e-14 2
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 218 4.9e-14 1
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 153 6.6e-14 3
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 150 1.1e-13 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 149 1.9e-13 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 147 2.0e-13 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 147 2.0e-13 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 145 2.1e-13 2
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 210 2.2e-13 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 145 2.6e-13 2
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 209 3.2e-13 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 145 3.2e-13 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 144 3.3e-13 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 146 4.0e-13 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 145 4.5e-13 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 173 1.3e-12 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 173 1.3e-12 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 168 1.4e-12 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 173 1.6e-12 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 201 1.7e-12 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 173 2.3e-12 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 173 2.4e-12 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 173 2.9e-12 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 200 2.9e-12 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 169 3.2e-12 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 198 3.6e-12 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 177 3.8e-12 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 177 3.8e-12 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 198 4.7e-12 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 163 4.8e-12 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 163 4.8e-12 2
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 150 8.6e-12 2
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 154 8.9e-12 3
DICTYBASE|DDB_G0287635 - symbol:prpf4 "pre-mRNA processin... 197 9.2e-12 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 149 9.8e-12 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 194 1.3e-11 1
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 176 1.3e-11 2
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 177 1.4e-11 3
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 189 1.7e-11 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 193 1.9e-11 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 192 2.1e-11 1
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 146 2.4e-11 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 189 3.0e-11 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 189 3.0e-11 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 189 3.0e-11 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 189 3.0e-11 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 189 3.0e-11 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 189 3.0e-11 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 189 3.0e-11 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 189 3.0e-11 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 189 3.0e-11 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 188 3.9e-11 1
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 164 4.5e-11 2
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 155 4.8e-11 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 143 4.9e-11 2
UNIPROTKB|B5FZ19 - symbol:EIF3I "Eukaryotic translation i... 184 5.1e-11 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 186 6.5e-11 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 187 7.5e-11 1
SGD|S000001885 - symbol:CDC4 "F-box protein required for ... 190 8.1e-11 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 188 8.1e-11 1
UNIPROTKB|H9L227 - symbol:PRPF19 "Pre-mRNA-processing fac... 164 9.1e-11 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 185 1.4e-10 1
UNIPROTKB|E1C6T8 - symbol:EIF3I "Uncharacterized protein"... 180 1.5e-10 1
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 152 1.6e-10 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 182 1.8e-10 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 181 2.3e-10 1
WARNING: Descriptions of 574 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0011785 [details] [associations]
symbol:BRWD3 "BRWD3" species:7227 "Drosophila melanogaster"
[GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IGI]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IGI] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:AE014297 GO:GO:0007095 GO:GO:0006911 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0046427 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HSSP:Q92793
FlyBase:FBgn0011785 RefSeq:NP_732982.1 UniGene:Dm.5099
ProteinModelPortal:Q9VC96 SMR:Q9VC96 IntAct:Q9VC96 STRING:Q9VC96
EnsemblMetazoa:FBtr0084604 GeneID:42898 KEGG:dme:Dmel_CG31132
UCSC:CG31132-RA InParanoid:Q9VC96 OMA:KSRFENH PhylomeDB:Q9VC96
GenomeRNAi:42898 NextBio:831161 ArrayExpress:Q9VC96 Bgee:Q9VC96
Uniprot:Q9VC96
Length = 2232
Score = 1336 (475.4 bits), Expect = 1.5e-226, Sum P(5) = 1.5e-226
Identities = 272/549 (49%), Positives = 367/549 (66%)
Query: 123 NSVKVHNTVNVLRSREYSGPLSRSLM-ISSHKTSLLVPNSV---KVHNTVNVLRSREYSG 178
NS+ N+LR++E + RSL + + +P+SV HN VL RE+ G
Sbjct: 99 NSLLGTGRQNLLRTKE-TVYCHRSLRDYCTRLNGVSLPDSVLTKPTHNLDRVLTGREHGG 157
Query: 179 PLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 238
+ R L++ + Y + +GHLS+V+CVLFD+ G I+TGADDLLIK+W A DG+L
Sbjct: 158 EVRRKLLVPTDLYRRTKLLRRTVGHLSSVYCVLFDRTGRYIITGADDLLIKIWSAADGRL 217
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
LATLRG S EI+DIAI+ N +LAAG++D +R+W++QT +PI+VL H G+IT VNFCP
Sbjct: 218 LATLRGASSEITDIAINLDNTMLAAGSLDHILRVWDMQTTSPIAVLSAHTGMITSVNFCP 277
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 358
+ YL +TSTDG I FW+Y T +P ++E++RPG A ++C++FSPGG
Sbjct: 278 SPRSDLKYLVTTSTDGSIAFWQYSTPRGQKITFAPKPTQYHEKLRPGQAQMMCTTFSPGG 337
Query: 359 LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+FLA GS DHHVRVY M G D P ILE E ++D VDS+QWSH LRF+SGS+DGTA IW
Sbjct: 338 IFLAAGSADHHVRVYMM-GEDGPKRILETEAYTDAVDSVQWSHRGLRFISGSKDGTAHIW 396
Query: 419 YYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD 478
++ QW+ +L M L E E K++KVTMVAWDASDR+VITA+N +F IKIWD
Sbjct: 397 TFESQQWKSSKLCMTERLASCPEP--EEGKRLKVTMVAWDASDRYVITAVN-DFTIKIWD 453
Query: 479 AFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGY--KWFHNI 536
+ + L +VL+GH +E++VLES+P D VLLSAGHDG + +WDI ++G F N
Sbjct: 454 SKSAKLHRVLRGHKDELYVLESNPRDEHVLLSAGHDGQVFLWDI----EQGVCVANFLND 509
Query: 537 VEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGG-FKRPQNIPRELFFHTDYRTLNR 595
++GQG G++FD KWSPDGT A TDS+GH+L++GLG ++ + +P ELFFHTD+R L R
Sbjct: 510 IDGQGHGSVFDAKWSPDGTMIAATDSHGHILIFGLGVCIEKYKMLPTELFFHTDFRPLLR 569
Query: 596 PNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDTELLPDITTND 655
DE T + PHLMPPPFLVD +G P+P QR VPGRE+ +L+P++T
Sbjct: 570 DAQ--HHVVDEQTQIMPHLMPPPFLVDADGNPHPSRFQRFVPGRESCSLDQLIPNLTVGV 627
Query: 656 DGHVEIVEG 664
DG V I +G
Sbjct: 628 DG-VVIDDG 635
Score = 796 (285.3 bits), Expect = 1.5e-226, Sum P(5) = 1.5e-226
Identities = 139/255 (54%), Positives = 190/255 (74%)
Query: 878 EVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPW 937
E+P++Y+P++WL+EV+P+KAPYYPQMGDEV++F+QG+ KY+DAVR K +Y+LS S PW
Sbjct: 985 EIPELYRPAEWLSEVIPRKAPYYPQMGDEVVYFRQGHAKYLDAVRLKKVYKLSH-SSEPW 1043
Query: 938 GNLILQEPELVKVVGIKYEIAPPRMCCLKLAVMKPNGKLTNEFFNIKYHDMPDVIDFFVL 997
L++ ELV+V+GIKYEI PPR+CCLKLA++ G +T F IKYHDMPDV+DF VL
Sbjct: 1044 NFHTLRDHELVRVIGIKYEIRPPRLCCLKLAIIDEEGNMTGTTFKIKYHDMPDVLDFLVL 1103
Query: 998 RQIYETAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTK----SPFLGYKILWDNNEREN 1053
RQ ++ A+ R W++GDRF MI D WW G IE + + + S F+ +++ WDN E E
Sbjct: 1104 RQTFDLAVQRNWSIGDRFRCMIVDGWWMGQIESRHALSADFPDSSFMCFRVRWDNGEYEF 1163
Query: 1054 LSPWDLEPPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEV 1113
+SPWD+EP + + E GG++PV PEEI+ LY P+ +EW +GDRD TC +II GLE+V
Sbjct: 1164 MSPWDMEPIDQQRVPDEVGGAVPVLPEEIRATLYQPKSEEWHRGDRDGTCRRIINGLEQV 1223
Query: 1114 MGLSVAEPFLVPVDI 1128
M LS+AE FL PVD+
Sbjct: 1224 MRLSIAEHFLAPVDL 1238
Score = 255 (94.8 bits), Expect = 1.6e-100, Sum P(5) = 1.6e-100
Identities = 82/287 (28%), Positives = 132/287 (45%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI K+L GP E AKVL +E K +LP R DW+G H QT E+ + ++ A+ L +
Sbjct: 19 LISKFLAAGPLEETAKVLIRELEEKKVLPRRLDWQGNEHEQTFEELERKYKHIGANHLLE 78
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
IC RLGPL+D+EL P+ P ++++ S DY R +G SL P
Sbjct: 79 ICSRLGPLVDRELPPSVPGINSLLGTGRQNLLRTKETVYCH-RSLRDYCTRLNGVSL--P 135
Query: 123 NSV---KVHNTVNVLRSREYSGPLSRSLMISS---HKTSLLVPNSVKVHNTVNVL--RSR 174
+SV HN VL RE+ G + R L++ + +T LL + + VL R+
Sbjct: 136 DSVLTKPTHNLDRVLTGREHGGEVRRKLLVPTDLYRRTKLLRRTVGHLSSVYCVLFDRTG 195
Query: 175 EYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR 234
Y + L+I ++ R G S + + + ++ G+ D ++++W +
Sbjct: 196 RYIITGADDLLIKIWSAADGRLLATLRGASSEITDIAINLDNTMLAAGSLDHILRVWDMQ 255
Query: 235 DGKLLATLRGCSGEISDIAI--DNRNIL--LAAGTVDKTIRIWNLQT 277
+A L +G I+ + R+ L L + D +I W T
Sbjct: 256 TTSPIAVLSAHTGMITSVNFCPSPRSDLKYLVTTSTDGSIAFWQYST 302
Score = 68 (29.0 bits), Expect = 1.5e-226, Sum P(5) = 1.5e-226
Identities = 13/20 (65%), Positives = 17/20 (85%)
Query: 1387 QVSFSRRGRMRKPTAKLRGL 1406
QV+ S RGR+RKP+AK RG+
Sbjct: 2210 QVNVSSRGRVRKPSAKARGI 2229
Score = 51 (23.0 bits), Expect = 1.5e-226, Sum P(5) = 1.5e-226
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 844 WIHE--GVNLEPPKRVRR 859
W+ + G NLEPPKR +R
Sbjct: 921 WVADTPGPNLEPPKRSKR 938
Score = 50 (22.7 bits), Expect = 1.5e-226, Sum P(5) = 1.5e-226
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 1166 ARRMPPRRTNRVGTSLGRQYRENPSDVSDYDSGDRYAMRARQSKQVQ-SVQAGRRGQTIV 1224
ARR+P V S + E+ D D D + + R R ++ +V A G V
Sbjct: 1526 ARRLP------VANSSEDEDEEDDDDDDDDDDEEEASTRGRSRRRNGVAVSASSSGSNRV 1579
Query: 1225 TSRTRGKQSYNKFS 1238
TS + +Q K S
Sbjct: 1580 TSSSAAQQRRGKSS 1593
Score = 45 (20.9 bits), Expect = 5.2e-226, Sum P(5) = 5.2e-226
Identities = 19/67 (28%), Positives = 27/67 (40%)
Query: 1165 KARRMPPRRTNRV-GTSLGRQYRENPSDVSDYDSGDRYAMRARQSKQVQSVQAGRRGQTI 1223
K RR+ N G SL R+ R S + A ++ + Q Q GRR
Sbjct: 1682 KRRRLNKSPANAAPGPSLPRRTRRIAGS-----SAEEAASHSQHDESTQDSQIGRRKGRS 1736
Query: 1224 VTSRTRG 1230
+SR+ G
Sbjct: 1737 ASSRSIG 1743
Score = 43 (20.2 bits), Expect = 8.4e-226, Sum P(5) = 8.4e-226
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 1190 SDVSDYDSGDRYAMRARQSKQVQSVQAGRRGQTIVTSRTRGKQ-SYNKFSGRGRGRK 1245
SD S D +R +Q ++ +A +R + S + SYN GRG R+
Sbjct: 1609 SDASS-DEEERAQSNDSSPQQTRTRRARQRQRLSDDSNINDSEDSYNPNEGRGSRRR 1664
Score = 42 (19.8 bits), Expect = 1.1e-225, Sum P(5) = 1.1e-225
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 1162 RHGKARRMPPRRTNRVGTSLGRQYRENPSDVSDYDSGDRYAMRARQ---SKQVQSVQAGR 1218
R+G A +NRV +S Q R S S+ + + + +A S + + Q+
Sbjct: 1564 RNGVAVSASSSGSNRVTSSSAAQQRRGKSSSSEEEEEEETSAQATSDASSDEEERAQSND 1623
Query: 1219 RG-QTIVTSRTRGKQ 1232
Q T R R +Q
Sbjct: 1624 SSPQQTRTRRARQRQ 1638
Score = 42 (19.8 bits), Expect = 4.6e-144, Sum P(4) = 4.6e-144
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1078 EPEEIQELLYHPRPDEWPQGDRDATCE 1104
+ EE +E+L P D+ P R A +
Sbjct: 1833 DSEEAEEILPTPTKDDLPSTSRAALAQ 1859
Score = 37 (18.1 bits), Expect = 2.0e-140, Sum P(3) = 2.0e-140
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 654 NDDGHVEIVEGSERNGERPVEVE 676
N D H E S+ + ER E E
Sbjct: 2176 NGDAHASSQERSQASTERDQEEE 2198
>MGI|MGI:3029414 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:3029414 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HOVERGEN:HBG108248
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AK050539
EMBL:AK139563 EMBL:AK163354 EMBL:BX000698 EMBL:AL731764
EMBL:BC082562 IPI:IPI00652540 IPI:IPI00660178 IPI:IPI00750468
RefSeq:NP_001074946.1 UniGene:Mm.100112 UniGene:Mm.426127
ProteinModelPortal:A2AHJ4 SMR:A2AHJ4 PhosphoSite:A2AHJ4
PRIDE:A2AHJ4 Ensembl:ENSMUST00000101283 Ensembl:ENSMUST00000150434
GeneID:382236 KEGG:mmu:382236 UCSC:uc009ucm.1 UCSC:uc009ucn.1
HOGENOM:HOG000203884 InParanoid:A2AHJ4 ChiTaRS:BRWD3 NextBio:403145
Bgee:A2AHJ4 CleanEx:MM_BRWD3 Genevestigator:A2AHJ4 Uniprot:A2AHJ4
Length = 1799
Score = 1259 (448.2 bits), Expect = 1.6e-209, Sum P(5) = 1.6e-209
Identities = 263/528 (49%), Positives = 346/528 (65%)
Query: 160 NSVKVHNTVNVLRSREYSGPLSRFLMI-SSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEV 218
N VK N VN+ +R+ +G SRF + S Y +++ H LGHLS+V+CV FD+ G
Sbjct: 136 NYVKPPNVVNITSARQLTG-CSRFSHVFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRR 194
Query: 219 IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 278
I TG+DD L+K+W DG+LLATLRG S EISD+A++ N L+AAG+ DK +R+W L+T
Sbjct: 195 IFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTC 254
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV-FHE-PV 336
AP++VL GH IT + FCP YL ST DG I FW++ + KT+ F + PV
Sbjct: 255 APVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHV-----KTMKFRDRPV 309
Query: 337 MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDS 396
F ER RPG I CSSFS GG+F+ TGS DH +R+Y + G + P I E+E H+DKV +
Sbjct: 310 KFTERSRPG-VQISCSSFSSGGMFITTGSTDHVIRIYYL-GSEIPEKIAELESHTDKVVA 367
Query: 397 IQWSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN-KKIKVT 453
+Q+ ++ LRFVSGSRDGTA IW Y+ +W+ I LDM T + TS E K+KVT
Sbjct: 368 VQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMSGNNLTSAEDKVTKLKVT 427
Query: 454 MVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH 513
MVAWD D VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPFD R++LSAGH
Sbjct: 428 MVAWDRYDTTVITAVN-NFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGH 486
Query: 514 DGLIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLG 572
DG I IWD+ +K R Y N++EGQG GA+FD K+SPDG A TDS+GHLL++G G
Sbjct: 487 DGNIFIWDLDRGTKIRNY---FNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFG 543
Query: 573 GFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEV 632
K + IP ++FFHTDYR L R + DE T PHLMPPPFLVD++G P+P +
Sbjct: 544 CSKYYEKIPDQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTKF 601
Query: 633 QRLVPGRENADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 677
QRLVPGREN D +L+P + N DG V E V G + N + ++G
Sbjct: 602 QRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQEESILDG 649
Score = 704 (252.9 bits), Expect = 1.6e-209, Sum P(5) = 1.6e-209
Identities = 136/289 (47%), Positives = 185/289 (64%)
Query: 847 EGVNLEPPKRVRRHTKVKPIQ-VSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGD 905
E + LE ++ + TK K VS+ + P E + P W+ + +P+++P+ PQMGD
Sbjct: 888 ENLKLEDRQKKPKQTKKKKGGLVSMAGE--PNE--EWLAPQ-WILDTIPRRSPFVPQMGD 942
Query: 906 EVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCL 965
E+++F+QG++ YV AVR IY ++ L+ PW + L+E E VK+VGIKYEI PP +CCL
Sbjct: 943 ELIYFRQGHEAYVRAVRKSKIYSVN-LQKQPWNKMDLREQEFVKIVGIKYEIGPPTLCCL 1001
Query: 966 KLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWW 1024
KLA + P +GK+T E F+IKYHDMPDVIDF VL Q Y A R W +GDRF S+IDDAWW
Sbjct: 1002 KLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWW 1061
Query: 1025 WGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKE-ATEPGGSLPVEP 1079
+GT+E + P S F Y + WDNNERE +SPWD+EP +G E G +PV
Sbjct: 1062 FGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPDGTAFPDEVGAGIPVSQ 1121
Query: 1080 EEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
EE+ LLY P+ EW RD CE++I G+ ++ L A PF VPVD+
Sbjct: 1122 EELTALLYKPQEGEWGAHSRDEECERVIQGINNLLSLDFASPFAVPVDL 1170
Score = 232 (86.7 bits), Expect = 2.7e-85, Sum P(5) = 2.7e-85
Identities = 77/287 (26%), Positives = 129/287 (44%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI ++L+ GPC+++A+VL +E L+P R DWEG H ++ ++ +++ ++ +L K
Sbjct: 15 LIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGKEHRRSFEDLVAANAHIPPDYLLK 74
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
IC+R+GPLLDKE+ + P K ++ + + A G +P
Sbjct: 75 ICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKSTLWNGSAFAALHRGRPPELP 134
Query: 123 -NSVKVHNTVNVLRSREYSG--------PLSRSLMISSHKTSLLVPNSVKVHNTVNVLRS 173
N VK N VN+ +R+ +G P S I HK L +SV V RS
Sbjct: 135 VNYVKPPNVVNITSARQLTGCSRFSHVFPSSAYQHIKMHKRILGHLSSVYC---VAFDRS 191
Query: 174 --REYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLW 231
R ++G S ++ + R GH + + + + +I G+ D ++++W
Sbjct: 192 GRRIFTG--SDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVW 249
Query: 232 RARDGKLLATLRGCSGEISDIAI-----DNRNILLAAGTVDKTIRIW 273
R +A L+G S I+ I L + G D TI W
Sbjct: 250 CLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGA-DGTICFW 295
Score = 55 (24.4 bits), Expect = 1.6e-209, Sum P(5) = 1.6e-209
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVK 864
WI + G+NL+PPKR R K
Sbjct: 859 WIADAGINLQPPKRQTRQATQK 880
Score = 50 (22.7 bits), Expect = 1.6e-209, Sum P(5) = 1.6e-209
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 1354 SRRAR-RTRTKGQSYAVHXXXXXXXXXXXXXQAAQVSFSRRGRMRKPTAKLR 1404
SR R +TR +G+ ++ + SR GR+RK T K R
Sbjct: 1739 SRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRSGRVRKMTEKAR 1790
Score = 40 (19.1 bits), Expect = 1.6e-209, Sum P(5) = 1.6e-209
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 1217 GRRGQTIVTSRTRGKQSYNKFSGRGRGR 1244
G RG+ R RG + GRGRGR
Sbjct: 1682 GGRGRG---GRGRGGRGRGGGGGRGRGR 1706
Score = 38 (18.4 bits), Expect = 3.5e-12, Sum P(4) = 3.5e-12
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 376 DGVDSPLGILEVEE--HSDKVDS 396
DG+D+P+ V+E S DS
Sbjct: 1361 DGIDTPMDFSTVKETLESGNYDS 1383
>UNIPROTKB|F1N1C9 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00700000104382 OMA:MTGNNLP InterPro:IPR011044
SUPFAM:SSF50969 EMBL:DAAA02072255 IPI:IPI00686367
Ensembl:ENSBTAT00000021597 Uniprot:F1N1C9
Length = 1658
Score = 1236 (440.2 bits), Expect = 9.4e-209, Sum P(5) = 9.4e-209
Identities = 258/520 (49%), Positives = 341/520 (65%)
Query: 168 VNVLRSREYSGPLSRFLMI-SSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDL 226
VN+ +R+ +G SRF I S Y +++ H LGHLS+V+CV FD+ G I TG+DD
Sbjct: 1 VNITSARQLTG-CSRFSHIFPSAAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDC 59
Query: 227 LIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVG 286
L+K+W DG+LLATLRG S EISD+A++ N L+AAG+ DK +R+W L+T AP++VL G
Sbjct: 60 LVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQG 119
Query: 287 HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV-FHE-PVMFNERIRP 344
H IT + FCP YL ST DG I FW++ + KT+ F + PV F ER RP
Sbjct: 120 HSASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHV-----KTMKFKDRPVKFTERSRP 174
Query: 345 GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS-- 402
G I CSSFS GG+F+ TGS DH +R+Y + G + P I E+E H+DKV ++Q+ ++
Sbjct: 175 G-VQISCSSFSSGGMFITTGSTDHVIRIYYL-GSEIPEKIAELESHTDKVVAVQFCNNGD 232
Query: 403 HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN-KKIKVTMVAWDASD 461
LRFVSGSRDGTA IW Y+ +W+ I LDM T + S E K+KVTMVAWD D
Sbjct: 233 SLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMTGNNLPSGEDKVTKLKVTMVAWDRYD 292
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPFD R++LSAGHDG I +WD
Sbjct: 293 TTVITAVN-NFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFVWD 351
Query: 522 I-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNI 580
+ +K R Y N++EGQG GA+FD K+SPDG A TDS+GHLL++G G K + I
Sbjct: 352 LDRGTKIRNY---FNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCSKYYEKI 408
Query: 581 PRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRE 640
P ++FFHTDYR L R + DE T PHLMPPPFLVD++G P+P + QRLVPGRE
Sbjct: 409 PDQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRE 466
Query: 641 NADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 677
N D +L+P + N DG V E V G + N + ++G
Sbjct: 467 NCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDG 506
Score = 702 (252.2 bits), Expect = 9.4e-209, Sum P(5) = 9.4e-209
Identities = 134/283 (47%), Positives = 182/283 (64%)
Query: 852 EPPKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFFK 911
E K+ ++ K K VS+ + P E + + P W+ + +P+++P+ PQMGDE+++F+
Sbjct: 752 ERQKKPKQTRKKKGGLVSMAGE--PNE--EWFAPQ-WILDTIPRRSPFVPQMGDELIYFR 806
Query: 912 QGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVMK 971
QG++ YV AVR Y ++ L+ PW + L+E E VK+VGIKYEI PP +CCLKLA +
Sbjct: 807 QGHEAYVRAVRKSKTYSVN-LQKQPWNKMDLREQEFVKIVGIKYEIGPPTLCCLKLAFLD 865
Query: 972 P-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIEG 1030
P +GK+T E F+IKYHDMPDVIDF VL Q Y A R W +GDRF S+IDDAWW+GT+E
Sbjct: 866 PISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVES 925
Query: 1031 K----PSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKE-ATEPGGSLPVEPEEIQEL 1085
+ P S F Y + WDNNERE +SPWD+EP EG E G +PV EE+ L
Sbjct: 926 QQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTAL 985
Query: 1086 LYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
LY P+ EW RD CE++I G+ ++ L A PF VPVD+
Sbjct: 986 LYKPQEGEWGAHSRDEECERVIQGINHLLSLDFASPFAVPVDL 1028
Score = 50 (22.7 bits), Expect = 9.4e-209, Sum P(5) = 9.4e-209
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVK 864
W + G+NL+PPKR R K
Sbjct: 716 WTADAGINLQPPKRQTRQATQK 737
Score = 50 (22.7 bits), Expect = 9.4e-209, Sum P(5) = 9.4e-209
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 1354 SRRAR-RTRTKGQSYAVHXXXXXXXXXXXXXQAAQVSFSRRGRMRKPTAKLR 1404
SR R +TR +G+ ++ + SR GR+RK T K R
Sbjct: 1598 SRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRSGRVRKMTEKAR 1649
Score = 42 (19.8 bits), Expect = 9.4e-209, Sum P(5) = 9.4e-209
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 1217 GRRGQTIVTSRTRGKQSYNKFSGRGRGR 1244
G RG+ R RG + GRGRGR
Sbjct: 1541 GGRGRG---GRGRGSRGRGGGGGRGRGR 1565
Score = 37 (18.1 bits), Expect = 1.5e-134, Sum P(4) = 1.5e-134
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 1160 WTRHGKARRMPPRRTNRVGT 1179
WT PP+R R T
Sbjct: 716 WTADAGINLQPPKRQTRQAT 735
>RGD|1559445 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10116 "Rattus norvegicus" [GO:0007010 "cytoskeleton
organization" evidence=ISO] [GO:0008360 "regulation of cell shape"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 RGD:1559445 GO:GO:0007010
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00700000104382
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969
IPI:IPI00361975 ProteinModelPortal:D3Z8C5
Ensembl:ENSRNOT00000050336 UCSC:RGD:1559445 Uniprot:D3Z8C5
Length = 1799
Score = 1249 (444.7 bits), Expect = 1.5e-207, Sum P(5) = 1.5e-207
Identities = 263/528 (49%), Positives = 341/528 (64%)
Query: 160 NSVKVHNTVNVLRSREYSGPLSRFL-MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEV 218
N VK N VN+ R+ +G SRF S Y +++ H LGHLS+V+CV FD+ G
Sbjct: 136 NYVKPPNVVNIXSXRQXTG-CSRFXHXFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRR 194
Query: 219 IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 278
I TG+DD L+K+W DG+LLATLRG S EISD+A++ N L+AAG+ DK +R+W L+T
Sbjct: 195 IFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTC 254
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV-FHE-PV 336
AP++VL GH IT + FCP YL ST DG I FW++ + KT+ F + PV
Sbjct: 255 APVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHV-----KTMKFRDRPV 309
Query: 337 MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDS 396
F ER RPG I CSSFS GG+F+ TGS DH +R+Y + G + P I E+E H+DKV +
Sbjct: 310 KFTERSRPG-VQISCSSFSSGGMFITTGSTDHVIRIYYL-GSEIPEKIAELESHTDKVVA 367
Query: 397 IQWSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN-KKIKVT 453
Q + LRFVSGSRDGTA IW Y+ +W+ I LDM T + TS E K+KVT
Sbjct: 368 XQXCXNGKSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMSGNNLTSTEDKVTKLKVT 427
Query: 454 MVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH 513
MVAWD D VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPFD R++LSAGH
Sbjct: 428 MVAWDRYDTTVITAVN-NFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGH 486
Query: 514 DGLIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLG 572
DG I IWD+ +K R Y N++EGQG GA+FD K+SPDG A TDS+GHLL++G G
Sbjct: 487 DGNIFIWDLDRGTKIRNY---FNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFG 543
Query: 573 GFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEV 632
K + IP ++FFHTDYR L R + DE T PHLMPPPFLVD++G P+P +
Sbjct: 544 CSKYYEKIPDQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTKF 601
Query: 633 QRLVPGRENADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 677
QRLVPGREN D +L+P + N DG V E V G + N + ++G
Sbjct: 602 QRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQEESILDG 649
Score = 703 (252.5 bits), Expect = 1.5e-207, Sum P(5) = 1.5e-207
Identities = 126/247 (51%), Positives = 167/247 (67%)
Query: 888 WLAEVVPKKAPYYPQMGDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPEL 947
W+ + +P+++P+ PQMGDE+++F+QG++ YV AVR IY ++ L+ PW + L+E E
Sbjct: 925 WILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVN-LQKQPWNKMDLREQEF 983
Query: 948 VKVVGIKYEIAPPRMCCLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIA 1006
VK+VGIKYEI PP +CCLKLA + P +GK+T E F+IKYHDMPDVIDF VL Q Y A
Sbjct: 984 VKIVGIKYEIGPPTLCCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKE 1043
Query: 1007 REWNVGDRFCSMIDDAWWWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEPP 1062
R W +GDRF S+IDDAWW+GT+E + P S F Y + WDNNERE +SPWD+EP
Sbjct: 1044 RNWQIGDRFRSIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPI 1103
Query: 1063 KEGKE-ATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEP 1121
EG E G +PV EE+ LLY P+ EW RD CE++I G+ ++ L A P
Sbjct: 1104 PEGTAFPDEVGAGIPVSQEELTALLYKPQEGEWGAHSRDEECERVIQGINNLLSLDFASP 1163
Query: 1122 FLVPVDI 1128
F VPVD+
Sbjct: 1164 FAVPVDL 1170
Score = 231 (86.4 bits), Expect = 1.5e-84, Sum P(5) = 1.5e-84
Identities = 77/287 (26%), Positives = 128/287 (44%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI ++L+ GPC+++A+VL +E L+P R DWEG H ++ ++ +++ ++ +L K
Sbjct: 15 LIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGKEHRRSFEDLVAANAHIPPDYLLK 74
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
IC+R+GPLLDKE+ + P K ++ + + A G +P
Sbjct: 75 ICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKNTLWNGSAFAALHRGRPPELP 134
Query: 123 -NSVKVHNTVNVLRSREYSG--------PLSRSLMISSHKTSLLVPNSVKVHNTVNVLRS 173
N VK N VN+ R+ +G P S I HK L +SV V RS
Sbjct: 135 VNYVKPPNVVNIXSXRQXTGCSRFXHXFPSSAYQHIKMHKRILGHLSSVYC---VAFDRS 191
Query: 174 --REYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLW 231
R ++G S ++ + R GH + + + + +I G+ D ++++W
Sbjct: 192 GRRIFTG--SDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVW 249
Query: 232 RARDGKLLATLRGCSGEISDIAI-----DNRNILLAAGTVDKTIRIW 273
R +A L+G S I+ I L + G D TI W
Sbjct: 250 CLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGA-DGTICFW 295
Score = 50 (22.7 bits), Expect = 1.5e-207, Sum P(5) = 1.5e-207
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVK 864
W + G+NL+PPKR R K
Sbjct: 858 WTADAGINLQPPKRQTRQATQK 879
Score = 50 (22.7 bits), Expect = 1.5e-207, Sum P(5) = 1.5e-207
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 1354 SRRAR-RTRTKGQSYAVHXXXXXXXXXXXXXQAAQVSFSRRGRMRKPTAKLR 1404
SR R +TR +G+ ++ + SR GR+RK T K R
Sbjct: 1739 SRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRSGRVRKMTEKAR 1790
Score = 40 (19.1 bits), Expect = 1.5e-207, Sum P(5) = 1.5e-207
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 1217 GRRGQTIVTSRTRGKQSYNKFSGRGRGR 1244
G RG+ R RG + GRGRGR
Sbjct: 1682 GGRGRG---GRGRGGRGRGGGGGRGRGR 1706
Score = 38 (18.4 bits), Expect = 7.6e-134, Sum P(4) = 7.6e-134
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 1160 WTRHGKARRMPPRRTNRVGTSLGRQYRENPSDVSDYDSGDRYAMRARQSKQVQSVQAG 1217
WT PP+R R T + Y + D + S DR ++ KQ + + G
Sbjct: 858 WTADAGINLQPPKRQTRQATQ--KIYSSS-EDENVKSSEDRQ----KKPKQTRKKKGG 908
>UNIPROTKB|Q6RI45 [details] [associations]
symbol:BRWD3 "Bromodomain and WD repeat-containing protein
3" species:9606 "Homo sapiens" [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
EMBL:AY497046 EMBL:AY497047 EMBL:AY497048 EMBL:AY497049
EMBL:AY497050 EMBL:AY497051 EMBL:AY497052 EMBL:AY497053
EMBL:AY497054 EMBL:AY497055 EMBL:AY497056 EMBL:AY497057
EMBL:AY497058 EMBL:AY497059 EMBL:AY497060 EMBL:AL590031
EMBL:AL512504 EMBL:AL669934 EMBL:BC111490 EMBL:AK095887
IPI:IPI00167547 IPI:IPI00843754 IPI:IPI00844073 IPI:IPI00844236
IPI:IPI00844349 RefSeq:NP_694984.4 UniGene:Hs.147027
UniGene:Hs.613180 HSSP:P16649 ProteinModelPortal:Q6RI45
IntAct:Q6RI45 STRING:Q6RI45 PhosphoSite:Q6RI45 PaxDb:Q6RI45
PRIDE:Q6RI45 Ensembl:ENST00000373275 GeneID:254065 KEGG:hsa:254065
UCSC:uc004edo.3 CTD:254065 GeneCards:GC0XM079926 HGNC:HGNC:17342
HPA:HPA012802 MIM:300553 MIM:300659 neXtProt:NX_Q6RI45 Orphanet:323
PharmGKB:PA134900775 HOVERGEN:HBG108248 InParanoid:Q6RI45
OMA:MTGNNLP OrthoDB:EOG4X3H0H GenomeRNAi:254065 NextBio:92253
Bgee:Q6RI45 CleanEx:HS_BRWD3 Genevestigator:Q6RI45
InterPro:IPR011044 SUPFAM:SSF50969 Uniprot:Q6RI45
Length = 1802
Score = 1253 (446.1 bits), Expect = 4.8e-206, Sum P(4) = 4.8e-206
Identities = 265/529 (50%), Positives = 347/529 (65%)
Query: 160 NSVKVHNTVNVLRSREYSGPLSRFLMI-SSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEV 218
N VK N VN+ +R+ +G SRF I S Y +++ H LGHLS+V+CV FD+ G
Sbjct: 136 NYVKPPNVVNITSARQLTG-CSRFGHIFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRR 194
Query: 219 IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 278
I TG+DD L+K+W DG+LLATLRG S EISD+A++ N L+AAG+ DK +R+W L+T
Sbjct: 195 IFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTC 254
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFN-YLASTSTDGCIGFWKYKLDIDISKTV-FHE-P 335
AP++VL GH IT + FCP G N YL ST DG I FW++ + KT+ F + P
Sbjct: 255 APVAVLQGHSASITSIQFCP-STKGTNRYLTSTGADGTICFWQWHV-----KTMKFRDRP 308
Query: 336 VMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVD 395
V F ER RPG I CSSFS GG+F+ TGS DH +R+Y + G + P I E+E H+DKV
Sbjct: 309 VKFTERSRPG-VQISCSSFSSGGMFITTGSTDHVIRIYYL-GSEVPEKIAELESHTDKVV 366
Query: 396 SIQWSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN-KKIKV 452
++Q+ ++ LRFVSGSRDGTA IW Y+ +W+ I LDM T + S E K+KV
Sbjct: 367 AVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMTGNNLPSGEDKITKLKV 426
Query: 453 TMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG 512
TMVAWD D VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPFD R++LSAG
Sbjct: 427 TMVAWDRYDTTVITAVN-NFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAG 485
Query: 513 HDGLIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 571
HDG I IWD+ +K R Y N++EGQG GA+FD K+SPDG A TDS+GHLL++G
Sbjct: 486 HDGNIFIWDLDRGTKIRNY---FNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGF 542
Query: 572 GGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPE 631
G K + IP ++FFHTDYR L R + DE T PHLMPPPFLVD++G P+P +
Sbjct: 543 GCSKYYEKIPDQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTK 600
Query: 632 VQRLVPGRENADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 677
QRLVPGREN D +L+P + N DG V E V G + N + ++G
Sbjct: 601 FQRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDG 649
Score = 706 (253.6 bits), Expect = 4.8e-206, Sum P(4) = 4.8e-206
Identities = 134/283 (47%), Positives = 183/283 (64%)
Query: 852 EPPKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFFK 911
E K+ ++ K K VS+ + P E + + P W+ + +P+++P+ PQMGDE+++F+
Sbjct: 896 ERQKKPKQTRKKKGGLVSIAGE--PNE--EWFAPQ-WILDTIPRRSPFVPQMGDELIYFR 950
Query: 912 QGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVMK 971
QG++ YV AVR IY ++ L+ PW + L+E E VK+VGIKYE+ PP +CCLKLA +
Sbjct: 951 QGHEAYVRAVRKSKIYSVN-LQKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLD 1009
Query: 972 P-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIEG 1030
P +GK+T E F+IKYHDMPDVIDF VL Q Y A R W +GDRF S+IDDAWW+GT+E
Sbjct: 1010 PISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVES 1069
Query: 1031 K----PSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKE-ATEPGGSLPVEPEEIQEL 1085
+ P S F Y + WDNNERE +SPWD+EP EG E G +PV EE+ L
Sbjct: 1070 QQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTAL 1129
Query: 1086 LYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
LY P+ EW RD CE++I G+ ++ L A PF VPVD+
Sbjct: 1130 LYKPQEGEWGAHSRDEECERVIQGINHLLSLDFASPFAVPVDL 1172
Score = 238 (88.8 bits), Expect = 2.9e-86, Sum P(4) = 2.9e-86
Identities = 77/286 (26%), Positives = 130/286 (45%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI ++L+ GPC+++A+VL +E L+P R DWEG H ++ ++ +++ ++ +L K
Sbjct: 15 LIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGKEHRRSFEDLVAANAHIPPDYLLK 74
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
IC+R+GPLLDKE+ + P K ++ + + A G +P
Sbjct: 75 ICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKSTLWNGSAFAALHRGRPPELP 134
Query: 123 -NSVKVHNTVNVLRSREYSG--------PLSRSLMISSHKTSLLVPNSVKVHNTVNVLRS 173
N VK N VN+ +R+ +G P S I HK L +SV V RS
Sbjct: 135 VNYVKPPNVVNITSARQLTGCSRFGHIFPSSAYQHIKMHKRILGHLSSVYC---VAFDRS 191
Query: 174 --REYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLW 231
R ++G S ++ + R GH + + + + +I G+ D ++++W
Sbjct: 192 GRRIFTG--SDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVW 249
Query: 232 RARDGKLLATLRGCSGEISDI----AIDNRNILLAAGTVDKTIRIW 273
R +A L+G S I+ I + N L + D TI W
Sbjct: 250 CLRTCAPVAVLQGHSASITSIQFCPSTKGTNRYLTSTGADGTICFW 295
Score = 54 (24.1 bits), Expect = 4.8e-206, Sum P(4) = 4.8e-206
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVK 864
W + G+NL+PPKR R T K
Sbjct: 860 WTADAGINLQPPKRQTRQTTRK 881
Score = 50 (22.7 bits), Expect = 4.8e-206, Sum P(4) = 4.8e-206
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 1354 SRRAR-RTRTKGQSYAVHXXXXXXXXXXXXXQAAQVSFSRRGRMRKPTAKLR 1404
SR R +TR +G+ ++ + SR GR+RK T K R
Sbjct: 1742 SRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRSGRVRKMTEKAR 1793
>UNIPROTKB|F1N8L6 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
OMA:MTGNNLP InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02013450
EMBL:AADN02013451 IPI:IPI00578454 Ensembl:ENSGALT00000011586
Uniprot:F1N8L6
Length = 1495
Score = 1228 (437.3 bits), Expect = 3.8e-202, Sum P(3) = 3.8e-202
Identities = 256/526 (48%), Positives = 338/526 (64%)
Query: 160 NSVKVHNTVNVLRSREYSGPLSRFL-MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEV 218
N K N VN+L +R+ +G RF + + Y ++ H LGHLS+V+C+ FD+ G
Sbjct: 73 NYGKPPNVVNILSARQLTG-CGRFSHLFPTSTYQQMKMHKRILGHLSSVYCIAFDRSGRR 131
Query: 219 IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 278
I TG+DD L+K+W DG+LL+TLRG S EISD+A++ N LLAAG+ DK +R+W L+T
Sbjct: 132 IFTGSDDCLVKIWATDDGRLLSTLRGHSAEISDMAVNYENTLLAAGSCDKIVRVWCLRTC 191
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMF 338
AP++VL GH IT + F P YL ST DG I FW++ + K PV F
Sbjct: 192 APVAVLQGHSASITSIQFSPARKGTTRYLTSTGADGTICFWQWHANTMKFKD---RPVKF 248
Query: 339 NERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQ 398
ER RPG I CSSFS GG+F+ATGS DH +R+Y + G +SP + E+E H+DKV ++Q
Sbjct: 249 AERSRPG-VQISCSSFSSGGMFIATGSTDHVIRIYYL-GSESPEKMAELESHTDKVVAVQ 306
Query: 399 WSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN-KKIKVTMV 455
+ ++ LRFVSGSRDGTA +W Y +W+ + LDM T + S E K+KVTMV
Sbjct: 307 FCNNGDSLRFVSGSRDGTARVWQYHQQEWKSVVLDMATKMTGNNVASGEDKVTKLKVTMV 366
Query: 456 AWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDG 515
AWD D VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPFD R++LSAGHDG
Sbjct: 367 AWDRYDATVITAVN-NFLLKVWNSSTGQLLHSLSGHDDEVFVLEAHPFDQRIVLSAGHDG 425
Query: 516 LIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGF 574
I IWDI +K R Y N++EGQG GA+FD K+SPDG A TDS+GHLL++G G
Sbjct: 426 NIFIWDIDKGTKIRNY---FNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHLLLFGFGCS 482
Query: 575 KRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQR 634
K + IP ++FFHTDYR L R + DE T PHLMPPPFLVD++G P+P QR
Sbjct: 483 KYYEKIPDQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTRFQR 540
Query: 635 LVPGRENADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 677
LVPGREN D +L+P + N DG V E V G + N + ++G
Sbjct: 541 LVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDG 586
Score = 718 (257.8 bits), Expect = 3.8e-202, Sum P(3) = 3.8e-202
Identities = 135/291 (46%), Positives = 189/291 (64%)
Query: 847 EGVNLEPPKRV-RRHTKVKPIQVSLPKQLIPEE-VP-DIYKPSDWLAEVVPKKAPYYPQM 903
E NL+ K V ++ K+K + P L+ E P + + W+ + +P+++P+ PQM
Sbjct: 826 EDENLKGTKGVEQKRRKLKQPRKKKPSGLLSMEGEPSEEWLAPQWILDTIPRRSPFVPQM 885
Query: 904 GDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMC 963
GDE+++F+QG++ YV AVR IY ++ ++ PW + L+E E VK VGIKYE+ PP +C
Sbjct: 886 GDEIIYFRQGHEAYVRAVRKAKIYSIN-MQKQPWNKMELREQEFVKTVGIKYEVGPPTLC 944
Query: 964 CLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA 1022
CLKLA + P GK+T E F+IKYHDMPDVIDF VL Q Y A R W +GDRF S+IDDA
Sbjct: 945 CLKLAFLDPITGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDA 1004
Query: 1023 WWWGTIEGK-PSPTKSP---FLGYKILWDNNERENLSPWDLEPPKEGKEATEP-GGSLPV 1077
WW+GT+E + P + P F Y + WDNNERE +SPWD+EP EG E G +PV
Sbjct: 1005 WWFGTVESQQPFQAEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAYPEEVGAGVPV 1064
Query: 1078 EPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
P+E+ LLY P+ EW RD CE++I G+E+++ L ++ PF VPVD+
Sbjct: 1065 TPDELTALLYKPQEGEWGAHSRDEECERVIRGIEQLLSLDISNPFAVPVDL 1115
Score = 105 (42.0 bits), Expect = 3.0e-73, Sum P(3) = 3.0e-73
Identities = 55/236 (23%), Positives = 93/236 (39%)
Query: 54 NVTASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIAR 113
++ +L +IC+RLGPLLDKE+ + K ++ + A
Sbjct: 3 HIPPDYLLRICERLGPLLDKEIPQSVLGVQTLLGVGRQSLLRAAKDFRHTLWKGSAFAAL 62
Query: 114 QHGTSLLVP-NSVKVHNTVNVLRSREYSG--------PLSRSLMISSHKTSLLVPNSVKV 164
G +P N K N VN+L +R+ +G P S + HK L +SV
Sbjct: 63 HRGRPPELPVNYGKPPNVVNILSARQLTGCGRFSHLFPTSTYQQMKMHKRILGHLSSVYC 122
Query: 165 HNTVNVLRS--REYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTG 222
+ RS R ++G S ++ + R GH + + + + ++ G
Sbjct: 123 ---IAFDRSGRRIFTG--SDDCLVKIWATDDGRLLSTLRGHSAEISDMAVNYENTLLAAG 177
Query: 223 ADDLLIKLWRARDGKLLATLRGCSGEISDIAID-----NRNILLAAGTVDKTIRIW 273
+ D ++++W R +A L+G S I+ I L + G D TI W
Sbjct: 178 SCDKIVRVWCLRTCAPVAVLQGHSASITSIQFSPARKGTTRYLTSTGA-DGTICFW 232
Score = 49 (22.3 bits), Expect = 3.8e-202, Sum P(3) = 3.8e-202
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVK 864
W + G+NL+PPKR R K
Sbjct: 799 WTADAGINLQPPKRQTRQAARK 820
Score = 41 (19.5 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 785 RTRAEYSEHIQDQYEDP 801
RT + S H+ D E+P
Sbjct: 1433 RTSSSVSSHVSDTTEEP 1449
Score = 38 (18.4 bits), Expect = 1.9e-130, Sum P(3) = 1.9e-130
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 1091 PDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
PD W + C++++ + E +EPF PVD+
Sbjct: 1246 PDAWKE-----QCKQLLNLIYE---REDSEPFRQPVDL 1275
Score = 38 (18.4 bits), Expect = 8.0e-127, Sum P(2) = 8.0e-127
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 691 TSHVHVLRSRANGESSAATEGTSPSGTAPTAQNKN 725
+SHV G ++ PS + AQN++
Sbjct: 1439 SSHVSDTTEEPLGSAAGEEVEVQPSSSGSNAQNRS 1473
>UNIPROTKB|E1BSG1 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02010822
EMBL:AADN02010823 IPI:IPI00586943 Ensembl:ENSGALT00000025882
OMA:SRETNST Uniprot:E1BSG1
Length = 2293
Score = 1238 (440.9 bits), Expect = 7.5e-197, Sum P(4) = 7.5e-197
Identities = 247/504 (49%), Positives = 336/504 (66%)
Query: 166 NTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADD 225
N V V R+R+ +G Y +++ H LGHLS+V+CV FD+ G I TG+DD
Sbjct: 151 NLVEVYRARQLTGYAKFSTSFPGSMYQHVKMHRRILGHLSSVYCVAFDRTGHRIFTGSDD 210
Query: 226 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV 285
L+K+W +G+L ATLRG S EISD+A++ N ++AAG+ DK IR+W L+T AP++VL
Sbjct: 211 CLVKIWSTHNGRLFATLRGHSAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPVAVLH 270
Query: 286 GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPG 345
GH G IT + F P+ Y+ ST DG + FW++ D S + PV F E+ RPG
Sbjct: 271 GHTGSITSLQFSPMVKGSLRYMVSTGADGNVCFWQWDTD---SMKFSNRPVKFTEKPRPG 327
Query: 346 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 405
+LCSSFS GG+FLATGS DH +R+Y G ++P I E+E H+DKVDSIQ+S+S R
Sbjct: 328 -VQMLCSSFSVGGMFLATGSTDHVIRMYYF-GSETPERIAELESHADKVDSIQFSNSGDR 385
Query: 406 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVI 465
F+SGSRDGTA IW ++ ++WR I LDM+ LP + ++ + KVTM+AW+ D +V+
Sbjct: 386 FISGSRDGTARIWRFEEAEWRSILLDMSDRLPGDMCSDEDKFMRPKVTMIAWNQDDNYVV 445
Query: 466 TAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 525
TA+N N +K+W++ G L+ L GH +EVFVLE+HPFDSR++LSAGHDG I IWDI +
Sbjct: 446 TAVN-NHLLKVWNSSTGQLLHDLVGHADEVFVLETHPFDSRIMLSAGHDGNIFIWDI--T 502
Query: 526 KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELF 585
K K + N++EGQG GA+FD K+SPDG A TDS+GHLL++G G K + IP ++F
Sbjct: 503 KGTKTKHYFNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHLLIFGFGCSKPYEKIPDQMF 562
Query: 586 FHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDT 645
FHTDYR L R + + DE T PHLMPPPFLVD++G P+P + QRLVPGREN+ D
Sbjct: 563 FHTDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTKYQRLVPGRENSADE 620
Query: 646 ELLPD---ITTNDDGHVEIVEGSE 666
L+P + T+D VE V G +
Sbjct: 621 HLIPQLGYVATSDGEVVEQVIGQQ 644
Score = 677 (243.4 bits), Expect = 7.5e-197, Sum P(4) = 7.5e-197
Identities = 128/287 (44%), Positives = 183/287 (63%)
Query: 853 PPKRVRRHTKVKPIQ-----VSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEV 907
PPKR RR + KP + P Q + E+ + P W+ + +++P+ PQMGDEV
Sbjct: 909 PPKRRRRKRRKKPRPKKQEGANTPTQPVNSELSYDWHPPVWITDTALRRSPFVPQMGDEV 968
Query: 908 MFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKL 967
++F+QG++ Y++AVR IYEL+ PW ++L++ ELVK+VGI+YE+ PP +CCLKL
Sbjct: 969 IYFRQGHEAYIEAVRRNNIYELNP-HKEPWRKVVLRDQELVKIVGIRYEVGPPTLCCLKL 1027
Query: 968 AVMK-PNGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWG 1026
A + GK T++ F+IKYHDMPDVIDF +LRQ Y+ A R W DRF S+IDDAWW+G
Sbjct: 1028 AFIDHATGKHTDKSFSIKYHDMPDVIDFLILRQFYDEARQRNWQASDRFRSIIDDAWWFG 1087
Query: 1027 TIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKEATEP-GGSLPVEPEE 1081
T+ G+ P S F Y + WDN E E LSPWD+EP + + E G S+ V EE
Sbjct: 1088 TVLGQEPYQPQYPDSHFQCYSVKWDNGEVEKLSPWDMEPISDNVDQPEELGASVSVTFEE 1147
Query: 1082 IQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
+++LLY P EW RD CE+II+G+++++ L ++ F PVD+
Sbjct: 1148 MEKLLYKPEEGEWGMRSRDEACERIISGIDQLLTLDISAAFAGPVDL 1194
Score = 207 (77.9 bits), Expect = 1.9e-77, Sum P(4) = 1.9e-77
Identities = 70/260 (26%), Positives = 112/260 (43%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI ++L GPC +VL +E LLP+R DWEG H ++ E+ S+ +V L +
Sbjct: 24 LIARFLSTGPCRGTLRVLVQELEQHQLLPKRLDWEGNEHYRSYEELVLSNKHVAPDHLLQ 83
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
IC+R+GP+LDKE+ P+ K +V + A G P
Sbjct: 84 ICKRIGPILDKEIPPSISRVNSLLGAGRQSLLRTAKDCRNTVWKGSAFAALHRGRPPEFP 143
Query: 123 -NSVKVHNTVNVLRSREYSG--------PLSRSLMISSHKTSLLVPNSVKVHNTVNVLRS 173
N N V V R+R+ +G P S + H+ L +SV +
Sbjct: 144 VNYGTPPNLVEVYRARQLTGYAKFSTSFPGSMYQHVKMHRRILGHLSSVYCV-AFDRTGH 202
Query: 174 REYSGPLSRFLMI-SSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR 232
R ++G + I S+H N R GH + + + + +I G+ D +I++W
Sbjct: 203 RIFTGSDDCLVKIWSTH---NGRLFATLRGHSAEISDMAVNYENTMIAAGSCDKMIRVWC 259
Query: 233 ARDGKLLATLRGCSGEISDI 252
R +A L G +G I+ +
Sbjct: 260 LRTCAPVAVLHGHTGSITSL 279
Score = 63 (27.2 bits), Expect = 5.3e-128, Sum P(2) = 5.3e-128
Identities = 28/103 (27%), Positives = 43/103 (41%)
Query: 631 EVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHGHVYIQ 690
EV+ V +EN +D++ T +D + SE N +VE R++ G
Sbjct: 2052 EVEIEVTKKENDNDSQTKR--TESDAALKNTFDSSEENSTNH-KVENGRNWRTSGQSTSA 2108
Query: 691 TSHVHVLRSRANGESSAATEGTSPSGTAPTAQNKNFVKRLPLS 733
+H HV S S A T A +++ +KRL LS
Sbjct: 2109 YNH-HVSNSEEEVSSELAKRETKTIRRARNKRSRAPLKRLKLS 2150
Score = 52 (23.4 bits), Expect = 7.5e-197, Sum P(4) = 7.5e-197
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVK 864
WI + G+NL+PP R R V+
Sbjct: 872 WIADAGINLQPPVRTSRRKAVR 893
Score = 42 (19.8 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1214 VQAGRRGQTIVTSRTRG---KQSYNKFSGRGRG 1243
+ AG G + T+G K +N G+G G
Sbjct: 488 LSAGHDGNIFIWDITKGTKTKHYFNMIEGQGHG 520
Score = 41 (19.5 bits), Expect = 3.8e-60, Sum P(4) = 3.8e-60
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 676 EGQRHYNDHGHVYIQTSHV---HVLR 698
EG HY + + + HV H+L+
Sbjct: 58 EGNEHYRSYEELVLSNKHVAPDHLLQ 83
Score = 38 (18.4 bits), Expect = 7.5e-197, Sum P(4) = 7.5e-197
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 1317 QNGRAKRTNGRQSSS 1331
+NGR RT+G+ +S+
Sbjct: 2094 ENGRNWRTSGQSTSA 2108
Score = 38 (18.4 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 1065 GKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDAT 1102
G E E L +++ + + D + G RD T
Sbjct: 357 GSETPERIAELESHADKVDSIQFSNSGDRFISGSRDGT 394
>MGI|MGI:1890651 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:1890651 GO:GO:0005634 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 CTD:54014 HOVERGEN:HBG080933 KO:K11798
ChiTaRS:BRWD1 EMBL:AJ292467 EMBL:AJ292468 EMBL:AC144797
EMBL:AC152502 IPI:IPI00121655 IPI:IPI01007673 RefSeq:NP_001096649.1
RefSeq:NP_660107.2 UniGene:Mm.240871 UniGene:Mm.482469
ProteinModelPortal:Q921C3 SMR:Q921C3 IntAct:Q921C3
PhosphoSite:Q921C3 PRIDE:Q921C3 Ensembl:ENSMUST00000023631
Ensembl:ENSMUST00000099502 Ensembl:ENSMUST00000113829 GeneID:93871
KEGG:mmu:93871 UCSC:uc008aci.2 UCSC:uc008ack.2
GeneTree:ENSGT00700000104382 HOGENOM:HOG000095265 InParanoid:Q921C3
NextBio:351749 Bgee:Q921C3 CleanEx:MM_BRWD1 Genevestigator:Q921C3
GermOnline:ENSMUSG00000022914 Uniprot:Q921C3
Length = 2304
Score = 1205 (429.2 bits), Expect = 3.4e-196, Sum P(5) = 3.4e-196
Identities = 241/498 (48%), Positives = 330/498 (66%)
Query: 168 VNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLL 227
V + R R+ +G + Y +++ H LGHLSAV+CV FD+ G I TG+DD L
Sbjct: 150 VEIHRGRQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCL 209
Query: 228 IKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGH 287
+K+W +G+LL+TLRG S EISD+A++ N L+AAG+ DK IR+W L+T AP++VL GH
Sbjct: 210 VKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIRVWCLRTCAPVAVLQGH 269
Query: 288 QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 347
G IT + F P+ Y+ ST DG + FW++ L+ S P+ F E+ RPG
Sbjct: 270 TGSITSLQFSPMAKGPQRYMVSTGADGTVCFWQWDLE---SLKFSPRPLKFTEKPRPG-V 325
Query: 348 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV 407
+LCSSFS GG+FLATGS DH +R+Y + G D+P I E+E H+DKVDSIQ+ ++ RF+
Sbjct: 326 QMLCSSFSVGGMFLATGSTDHVIRMYFL-GFDAPEKIAELESHTDKVDSIQFCNNGDRFL 384
Query: 408 SGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITA 467
SGSRDGTA IW ++ +WR I LDM+ + + +E K KVTM+AW+ D V+TA
Sbjct: 385 SGSRDGTARIWRFEQLEWRSILLDMSARISGDTSSEEERFMKPKVTMIAWNQDDSTVVTA 444
Query: 468 INFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
+N + +K+W ++ G L+ L GH +EVFVLE+HPFDSR++LSAGHDG I IWDI +K
Sbjct: 445 VN-DHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDI--TKG 501
Query: 528 RGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFH 587
K + N++EGQG GA+FD K+S DG A TDS+GHLL++G G K + IP ++FFH
Sbjct: 502 IKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGFGCSKPYEKIPDQMFFH 561
Query: 588 TDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDTEL 647
TDYR L R + + DE T PHLMPPPFLVD++G P+P + QRLVPGREN+ D L
Sbjct: 562 TDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRENSADEHL 619
Query: 648 LPDI--TTNDDGHVEIVE 663
+P + DG E++E
Sbjct: 620 VPQLGYVATSDG--EVIE 635
Score = 693 (249.0 bits), Expect = 3.4e-196, Sum P(5) = 3.4e-196
Identities = 132/291 (45%), Positives = 191/291 (65%)
Query: 850 NLEPPKRVRRHTKV-KPIQVSLPKQLIPEEVPDI-----YKPSDWLAEVVPKKAPYYPQM 903
N+ PPKR R+ K KP + SL +++ P E+ ++ + P W+ + +K+P+ PQM
Sbjct: 904 NISPPKRRRKRRKESKPKRESL-RRMTPAELANMEHLYEFHPPVWITDTTLRKSPFVPQM 962
Query: 904 GDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMC 963
GDEVM+F+QG++ Y++AVR IYEL+ PW + L++ ELVK+VG++YE+ PP +C
Sbjct: 963 GDEVMYFRQGHEAYIEAVRRNNIYELNP-HKEPWRKMDLRDQELVKIVGLRYEVGPPTLC 1021
Query: 964 CLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA 1022
CLKLA + P G+LT++ F+I+YHDMPDVIDF VLRQ Y+ A R W DRF S+IDDA
Sbjct: 1022 CLKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQPCDRFRSIIDDA 1081
Query: 1023 WWWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPV 1077
WW+GT+ + P S F Y + WDN E E LSPWD+EP P E G S+ V
Sbjct: 1082 WWFGTVLSQEPYQPQYPDSHFQCYIVRWDNTETEKLSPWDMEPIPDNVDPPEELGASISV 1141
Query: 1078 EPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
+E+++LLY P+ EW Q RD C++II+G+++++ L +A F PVD+
Sbjct: 1142 TSDELEKLLYKPQEGEWGQRSRDEECDRIISGIDQLLNLDIAAAFAGPVDL 1192
Score = 227 (85.0 bits), Expect = 2.7e-80, Sum P(5) = 2.7e-80
Identities = 104/400 (26%), Positives = 177/400 (44%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI +YL GPC AA+VL +E LLP+R DWEG H+++ E+ S+ +V L +
Sbjct: 21 LIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHVAPDHLLQ 80
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
ICQR+GP+LDKE+ P+ K +V + A G +P
Sbjct: 81 ICQRIGPMLDKEVPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMP 140
Query: 123 -NSVKVHNTVNVLRSREYSGPLSRSL-----MISSHKTSLLVPNSVKVHNTVNVLRS--R 174
N + V + R R+ +G + S M K + + V R+ R
Sbjct: 141 VNYGPPPSLVEIHRGRQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHR 200
Query: 175 EYSGPLSRFLMI-SSHK---YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKL 230
++G + I S+H S LR H + ++ V ++ +I G+ D +I++
Sbjct: 201 IFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMA----VNYENT--LIAAGSCDKIIRV 254
Query: 231 WRARDGKLLATLRGCSGEI-----SDIAIDNRNILLAAGTVDKTIRIW--NLQTL--API 281
W R +A L+G +G I S +A + +++ G D T+ W +L++L +P
Sbjct: 255 WCLRTCAPVAVLQGHTGSITSLQFSPMAKGPQRYMVSTGA-DGTVCFWQWDLESLKFSPR 313
Query: 282 SVLVGHQGIITGVNF-CP-LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFN 339
+ + GV C V G +LA+ STD I Y L D + + E
Sbjct: 314 PLKFTEKPR-PGVQMLCSSFSVGGM-FLATGSTDHVIRM--YFLGFDAPEKIA-ELESHT 368
Query: 340 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
+++ ++ C++ G FL+ GS D R+++ + ++
Sbjct: 369 DKV---DSIQFCNN---GDRFLS-GSRDGTARIWRFEQLE 401
Score = 46 (21.3 bits), Expect = 3.4e-196, Sum P(5) = 3.4e-196
Identities = 14/55 (25%), Positives = 20/55 (36%)
Query: 1163 HGKARRMPPRRTNRVGTSLGRQYRENPSDVSDYDSGDRYAMRARQSKQVQSVQAG 1217
H + P N++ + ENPS + D Q K +QS Q G
Sbjct: 1968 HCEVPEAQPACRNKLPEPEHQDSAENPSQAASADLNSGGGSSFEQRKSIQSRQMG 2022
Score = 42 (19.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1214 VQAGRRGQTIVTSRTRG---KQSYNKFSGRGRG 1243
+ AG G + T+G K +N G+G G
Sbjct: 485 LSAGHDGSIFIWDITKGIKMKHYFNMIEGQGHG 517
Score = 41 (19.5 bits), Expect = 3.4e-196, Sum P(5) = 3.4e-196
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 844 WIHE-GVNLEPPKRV---RRHTK 862
W + G+NL+PP R+ RR T+
Sbjct: 869 WTADTGINLQPPLRMSCRRRVTR 891
Score = 38 (18.4 bits), Expect = 2.7e-125, Sum P(4) = 2.7e-125
Identities = 12/41 (29%), Positives = 14/41 (34%)
Query: 1016 CSMIDDAWWWGTIEGKPSPTKSPFLGYKILWDNNERENLSP 1056
CS DD W G S + S W + NL P
Sbjct: 839 CSSEDDEWRNDRRSGSDSDSSSDSSSQYSDWTADTGINLQP 879
Score = 37 (18.1 bits), Expect = 3.4e-196, Sum P(5) = 3.4e-196
Identities = 14/48 (29%), Positives = 18/48 (37%)
Query: 624 NGTPYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGER 671
NG P R R + D + P+I G VE V +N R
Sbjct: 679 NGLPSGEGTPRRGSFRRLSLDIQSPPNIGLRRSGQVEGVRQMHQNAPR 726
>ZFIN|ZDB-GENE-050208-261 [details] [associations]
symbol:phip "pleckstrin homology domain interacting
protein" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017956 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 SMART:SM00384 ZFIN:ZDB-GENE-050208-261
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:CR759802 EMBL:CR735144 IPI:IPI00634562
Ensembl:ENSDART00000138106 Bgee:E9QJ97 Uniprot:E9QJ97
Length = 1805
Score = 1247 (444.0 bits), Expect = 4.5e-196, Sum P(4) = 4.5e-196
Identities = 270/554 (48%), Positives = 343/554 (61%)
Query: 166 NTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADD 225
N + SR +G ++ + Y +++ H LGHLS+V+CV FD+ G I TG+DD
Sbjct: 145 NIAETIHSRRLNGSYRLGQLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDD 204
Query: 226 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV 285
L+K+W DG LLATLRG + EISD+A++ N LLAAG+ DK IR+W LQT AP++VL
Sbjct: 205 CLVKIWATDDGHLLATLRGHAAEISDMAVNYENTLLAAGSCDKMIRVWCLQTCAPLAVLE 264
Query: 286 GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE-PVMFNERIRP 344
GH IT + F PL +L+ST DG I FW++ D F + P F ER RP
Sbjct: 265 GHAASITSLQFSPLCSGNKRFLSSTGADGTICFWQW----DARTLKFGQRPSKFIERPRP 320
Query: 345 GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL 404
G ++CSSFS GG+FLATGS DH +RVY G P I E+E H+DKVDSIQ+SHS
Sbjct: 321 G-VQMICSSFSAGGMFLATGSTDHIIRVYYFGG-GQPEKISELESHTDKVDSIQFSHSGD 378
Query: 405 RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP--HTKETSDETNKKIKVTMVAWDASDR 462
RFVSGSRDGTA IW + WR I LDM T LP + ++ K+KVTMVAWD +D
Sbjct: 379 RFVSGSRDGTARIWQLQQQDWRSILLDMATKLPGKYNPPPLEDKVTKLKVTMVAWDCNDN 438
Query: 463 WVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
VITA N N +K+W+++ G+L+ VL GH +EVFVLE HPFDSRVL SAGHDG I+WD+
Sbjct: 439 TVITAAN-NLTLKVWNSYTGNLIHVLMGHEDEVFVLEPHPFDSRVLFSAGHDGNAIVWDL 497
Query: 523 LSS-KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIP 581
K R Y N++EGQG GA+FD K SPDG A TDS+GHLL++G G R I
Sbjct: 498 ARGVKIRSY---FNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSRYDKIA 554
Query: 582 RELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGREN 641
++FFHTDYR L R F DE T PHLMPPPFLVD++G P+PP QRLVPGREN
Sbjct: 555 DQMFFHTDYRPLIRDAHNF--VLDEQTQQAPHLMPPPFLVDVDGNPHPPRFQRLVPGREN 612
Query: 642 ADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHGHVYIQTSHVHVLRSRA 701
+ +L+P + G ++V G P++ QR + Q + SRA
Sbjct: 613 CREEQLIPQMGLTSSGLNQVVSQQAAEGSSPLDSMIQRLQQE------QDQRLGS-DSRA 665
Query: 702 N-GESSAATEGTSP 714
N G S+ TE TSP
Sbjct: 666 NRGSVSSPTEVTSP 679
Score = 634 (228.2 bits), Expect = 4.5e-196, Sum P(4) = 4.5e-196
Identities = 130/302 (43%), Positives = 190/302 (62%)
Query: 847 EGVNLEPPKRVRRHTKVKPIQV-SLPKQLIPEE----VPDI---------YKPSDWLAEV 892
+G + K+ RR K KP + +LPK+ P+E +P++ + PS+W+ +
Sbjct: 878 DGEKKKDSKKERR--KEKPDKDGALPKKKKPKEKRKRIPELQNQGLTLEEWLPSNWITDT 935
Query: 893 VPKKAPYYPQMGDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVG 952
+P++ P+ PQMGDEV +F+QG++ YV+ + I+ ++ + PW L L+E EL+K+VG
Sbjct: 936 MPRRCPFTPQMGDEVYYFRQGHEAYVEMAKKNKIFSINP-KKQPWHKLELREQELLKIVG 994
Query: 953 IKYEIAPPRMCCLKLAVMKPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNV 1011
IKYE+ P +CCLKLA + P+ GKLT F+IKYHDMPDVIDF VLRQ ++ A R W +
Sbjct: 995 IKYEVGLPTLCCLKLAFLDPDSGKLTGGSFSIKYHDMPDVIDFLVLRQQFDNARQRNWMI 1054
Query: 1012 GDRFCSMIDDAWWWGTIEGK-PSPTKSP---FLGYKILWDNNERENLSPWDLEP-PKEGK 1066
GDRF ++IDDAWW+GTIE + P + P F Y + WDN + E +SPWD+E P E
Sbjct: 1055 GDRFRAVIDDAWWFGTIESQEPYQAEYPDSLFQCYNVCWDNGDTEKMSPWDMEEVPDEVV 1114
Query: 1067 EATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPV 1126
E G S+ + +E + LLY P EW R+ CE+II G+ ++ L VA+PF +PV
Sbjct: 1115 FPEELGLSMALTQDEQKALLYKPLDGEWGSRTRNQECERIIRGINQLCTLDVAKPFELPV 1174
Query: 1127 DI 1128
D+
Sbjct: 1175 DL 1176
Score = 178 (67.7 bits), Expect = 3.6e-70, Sum P(4) = 3.6e-70
Identities = 69/290 (23%), Positives = 120/290 (41%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI ++LE GPC +AA+ L V+ K LLP+R DW G H + + + +++ L +
Sbjct: 18 LIARFLEAGPCQDAAETLIREVQQKELLPKRIDWTGKEHPGSYENLVKLYRHISPDHLLQ 77
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
+C+R+ PLL++E+ + P KS K V+ +A H P
Sbjct: 78 VCERVSPLLEREVPASVPGVNSLLGTGRQSVLRTNKS-CKHVVWKGSALAALHCGRPPEP 136
Query: 123 NSV--KVHNTVNVLRSREYSGPLSRSLMISS--------HKTSLLVPNSVKVHNTVNVLR 172
+ N + SR +G ++ + HK L +SV T +
Sbjct: 137 PVIFGSPPNIAETIHSRRLNGSYRLGQLVPTAVYQHMKMHKRILGHLSSVYCV-TFDRTG 195
Query: 173 SREYSGPLSRFLMI----SSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLI 228
R ++G + I H + LR H + ++ V ++ ++ G+ D +I
Sbjct: 196 RRIFTGSDDCLVKIWATDDGHLLATLRGHAAEISDMA----VNYENT--LLAAGSCDKMI 249
Query: 229 KLWRARDGKLLATLRGCSGEISDIAID-----NRNILLAAGTVDKTIRIW 273
++W + LA L G + I+ + N+ L + G D TI W
Sbjct: 250 RVWCLQTCAPLAVLEGHAASITSLQFSPLCSGNKRFLSSTGA-DGTICFW 298
Score = 48 (22.0 bits), Expect = 4.5e-196, Sum P(4) = 4.5e-196
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVK 864
W + G+NLEPPK+ K K
Sbjct: 848 WTADAGINLEPPKKTSVKKKKK 869
Score = 45 (20.9 bits), Expect = 4.0e-134, Sum P(4) = 4.0e-134
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 1095 PQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
P D A E+ LE + +EPF PVD+
Sbjct: 1305 PSSDPQAWKERCRELLELIFQCEDSEPFRQPVDL 1338
Score = 42 (19.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/120 (22%), Positives = 45/120 (37%)
Query: 575 KRPQNIPRELFFHTDYRTL-NRPNGLFEPTYDEVTNLP-----PHLMPPPFLVDLNGTPY 628
K+ PR F H + L +G T + +NL P P + TP
Sbjct: 1647 KKDTESPRRNFSHEEELMLPTGDDGGASSTAQD-SNLSDSGEYPKARGRPRITKTIDTPA 1705
Query: 629 PPEVQRLVPGRENADDTELLPDIT---TNDDGHVEIVEGSERNGERPVEVEGQR--HYND 683
PP + L ++ E+ P + +++ V I E G+ +G+R YN+
Sbjct: 1706 PPSPKTLRRSSRRGNE-EITPHTSGSAQSEEPEVYIGEDGSSKGQMKTRNQGRRTAFYNE 1764
Score = 41 (19.5 bits), Expect = 4.5e-196, Sum P(4) = 4.5e-196
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 1353 GSRRAR-RTRTKGQSYAVHXXXXXXXXXXXXX-QAAQVSF--SRRGRMRKPTAKLR 1404
GS + + +TR +G+ A + + A ++F S +GR+RK T K +
Sbjct: 1744 GSSKGQMKTRNQGRRTAFYNEEDSEEEQRQLLFEDASITFGTSSKGRVRKLTEKAK 1799
>UNIPROTKB|F1MPF7 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IEA]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008284 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:DAAA02025391 IPI:IPI00686987 Ensembl:ENSBTAT00000034372
Uniprot:F1MPF7
Length = 1759
Score = 1195 (425.7 bits), Expect = 1.3e-193, Sum P(4) = 1.3e-193
Identities = 254/549 (46%), Positives = 340/549 (61%)
Query: 169 NVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLI 228
+ L SR+ +G ++ + Y +++ H LGHLS+V+CV FD+ G I TG+DD L+
Sbjct: 85 DTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLV 144
Query: 229 KLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQ 288
K+W DG+LLATLRG + EISD+A++ N ++AAG+ DK IR+W L+T AP++VL GH
Sbjct: 145 KIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHS 204
Query: 289 GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 348
IT + F PL YL+ST DG I FW + D K + P F ER RPG
Sbjct: 205 ASITSLQFSPLCSGSKRYLSSTGADGTICFWLW--DAGTLK-INPRPAKFTERPRPG-VQ 260
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
++CSSFS GG+FLATGS DH +RVY G P I E+E H+DKVDSIQ+S++ RFVS
Sbjct: 261 MICSSFSAGGMFLATGSTDHIIRVYFF-GSGQPEKISELEFHTDKVDSIQFSNTSNRFVS 319
Query: 409 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK--KIKVTMVAWDASDRWVIT 466
GSRDGTA IW +K +W+ I LDM T P + +K K+KVTMVAWD D VIT
Sbjct: 320 GSRDGTARIWQFKRREWKSILLDMAT-RPAGQNLQGIEDKITKMKVTMVAWDRHDNTVIT 378
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS- 525
A+N N +K+W+++ G L+ VL GH +EVFVLE HPFD RVL SAGHDG +I+WD+
Sbjct: 379 AVN-NMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARGV 437
Query: 526 KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELF 585
K R Y F N++EGQG GA+FD K SPDG A TDS+GHLL++G G + I ++F
Sbjct: 438 KIRSY--F-NMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSKYDKIADQMF 494
Query: 586 FHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDT 645
FH+DYR L R F DE T PHLMPPPFLVD++G P+P QRLVPGREN +
Sbjct: 495 FHSDYRPLIRDANNF--VLDEQTQQAPHLMPPPFLVDVDGNPHPSRYQRLVPGRENCREE 552
Query: 646 ELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHGHVYIQTSHVHVLRSRANGES 705
+L+P + G +++ P++ QR + + + + G +
Sbjct: 553 QLIPQMGVTSSGLNQVLSQQANQDISPLDSMIQRLQQEQDLRRSGEAAISNTSRLSRGST 612
Query: 706 SAATEGTSP 714
S+ +E SP
Sbjct: 613 SSTSEVHSP 621
Score = 655 (235.6 bits), Expect = 1.3e-193, Sum P(4) = 1.3e-193
Identities = 128/286 (44%), Positives = 178/286 (62%)
Query: 851 LEPPKRVRRHTKVKPIQVS-LPKQ-LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 908
+ P K+ + K K + V L + L EE + PS W+ + +P++ P+ PQMGDEV
Sbjct: 847 VSPKKKKPKERKQKRLAVGELTENGLTLEE----WLPSTWITDTLPRRCPFVPQMGDEVY 902
Query: 909 FFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLA 968
+F+QG++ YV+ R IY ++ + PW + L+E EL+K+VGIKYE+ P +CCLKLA
Sbjct: 903 YFRQGHEAYVEMARKNKIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLA 961
Query: 969 VMKPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGT 1027
+ P+ GKLT F +KYHDMPDVIDF VLRQ +E A R WN+GDRF S+IDDAWW+GT
Sbjct: 962 FLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFEDAKYRRWNIGDRFRSVIDDAWWFGT 1021
Query: 1028 IEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVEPEEI 1082
IE + P S F Y + WDN + E +SPWD+E P E G S+P+ E
Sbjct: 1022 IESQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDVET 1081
Query: 1083 QELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
+ L+Y P EW RD CE+I+TG+ ++M L +A F+ PVD+
Sbjct: 1082 RSLIYKPLDGEWGSNPRDEECERIVTGINQLMTLDIASAFVAPVDL 1127
Score = 81 (33.6 bits), Expect = 1.1e-63, Sum P(4) = 1.1e-63
Identities = 54/229 (23%), Positives = 90/229 (39%)
Query: 60 LPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH-GTS 118
L +IC RLGPLL++E+ + P KS K V+ +A H G
Sbjct: 12 LLQICHRLGPLLEQEIPQSVPGVQTLLGAGRQSLLRTNKS-CKHVVWKGSALAALHCGRP 70
Query: 119 LLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISS--------HKTSLLVPNSVKVHNTVN 169
P N + + L SR+ +G ++ + HK L +SV T +
Sbjct: 71 PESPINYGSPPSIADTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCV-TFD 129
Query: 170 VLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIK 229
R ++G S ++ + R GH + + + + +I G+ D +I+
Sbjct: 130 RTGRRIFTG--SDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIR 187
Query: 230 LWRARDGKLLATLRGCSGEISDIAID-----NRNILLAAGTVDKTIRIW 273
+W R LA L+G S I+ + ++ L + G D TI W
Sbjct: 188 VWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGA-DGTICFW 235
Score = 57 (25.1 bits), Expect = 1.3e-193, Sum P(4) = 1.3e-193
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVKPIQVS 869
W + G+NL+PPK++ +H K K + S
Sbjct: 792 WTADAGINLQPPKKIPKH-KTKKAESS 817
Score = 43 (20.2 bits), Expect = 1.3e-193, Sum P(4) = 1.3e-193
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 1353 GSRRARRTRTKGQSYAVHXXXXXXXXXXXXX-QAAQVSF--SRRGRMRKPTAKLR 1404
GS RTR +G+ A + + ++F S RGR+RK T K +
Sbjct: 1699 GSEPHMRTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTSSRGRVRKLTEKAK 1753
>RGD|1309030 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0007010 "cytoskeleton organization" evidence=IEA;ISO]
[GO:0008360 "regulation of cell shape" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 RGD:1309030 GO:GO:0005737 GO:GO:0007010 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS OrthoDB:EOG470TGD
GeneTree:ENSGT00700000104382 EMBL:AC112406 IPI:IPI00762963
Ensembl:ENSRNOT00000002231 UCSC:RGD:1309030 ArrayExpress:D4AAI9
Uniprot:D4AAI9
Length = 2303
Score = 1192 (424.7 bits), Expect = 9.2e-193, Sum P(4) = 9.2e-193
Identities = 238/498 (47%), Positives = 329/498 (66%)
Query: 168 VNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLL 227
V++ R ++ +G + Y +++ H LGHLSAV+CV FD+ G I TG+DD L
Sbjct: 150 VDIHRGKQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCL 209
Query: 228 IKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGH 287
+K+W +G+LL+TLRG S EISD+A++ N L+AAG+ DK IR+W L+T AP++VL GH
Sbjct: 210 VKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIRVWCLRTCAPVAVLQGH 269
Query: 288 QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 347
G IT + F P+ Y+ ST DG + FW++ L+ S P+ F E+ RPG
Sbjct: 270 TGSITSLQFSPMAKGPQRYMVSTGADGTVCFWQWDLE---SLKFSPRPLKFTEKPRPG-V 325
Query: 348 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV 407
+LCSSFS GG+FLATGS DH +R+Y + G ++P I E+E H+DKVDSIQ+ ++ RF+
Sbjct: 326 QMLCSSFSVGGMFLATGSTDHVIRMYFL-GFEAPEKIAELESHTDKVDSIQFCNNGDRFL 384
Query: 408 SGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITA 467
SGSRDGTA IW ++ +W+ I LDM + +E K KVTM+AW+ D V+TA
Sbjct: 385 SGSRDGTARIWRFEQLEWKSILLDMAARISGDTSAEEERFMKPKVTMIAWNQDDSTVVTA 444
Query: 468 INFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
+N + +K+W ++ G L+ L GH +EVFVLE+HPFDSR++LSAGHDG I IWDI +K
Sbjct: 445 VN-DHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDI--TKG 501
Query: 528 RGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFH 587
K + N++EGQG GA+FD K+S DG A TDS+GHLL++G G K + IP ++FFH
Sbjct: 502 IKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGFGCSKPYEKIPDQMFFH 561
Query: 588 TDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDTEL 647
TDYR L R + + DE T PHLMPPPFLVD++G P+P + QRLVPGREN+ D L
Sbjct: 562 TDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRENSADEHL 619
Query: 648 LPDI--TTNDDGHVEIVE 663
+P + DG E++E
Sbjct: 620 VPQLGYVATSDG--EVIE 635
Score = 697 (250.4 bits), Expect = 9.2e-193, Sum P(4) = 9.2e-193
Identities = 133/291 (45%), Positives = 190/291 (65%)
Query: 850 NLEPPKRVRRHTKV-KPIQVSLPKQLIPEEVPDI-----YKPSDWLAEVVPKKAPYYPQM 903
N+ PPKR R+ K KP + SL ++ P E+ ++ + P W+ + +K+P+ PQM
Sbjct: 904 NISPPKRRRKRRKESKPKRESL-RRTTPAELANMEPLYEFHPPVWITDTTLRKSPFVPQM 962
Query: 904 GDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMC 963
GDEVM+F+QG++ Y++AVR IYEL+ PW + L++ ELVK+VG++YE+ PP +C
Sbjct: 963 GDEVMYFRQGHEAYIEAVRRNNIYELNP-NKEPWRKMDLRDQELVKIVGLRYEVGPPTLC 1021
Query: 964 CLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA 1022
CLKLA + P G+LT++ F+I+YHDMPDVIDF VLRQ Y+ A R W DRF S+IDDA
Sbjct: 1022 CLKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQPSDRFRSIIDDA 1081
Query: 1023 WWWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPV 1077
WW+GT+ + P S F Y + WDN E E LSPWD+EP P E G S+ V
Sbjct: 1082 WWFGTVLSQEPYQPQYPDSHFQCYSVRWDNTEIEKLSPWDMEPIPDNVDPPEELGASISV 1141
Query: 1078 EPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
+E+++LLY P+ EW Q RD CE+II+G+++++ L +A F PVD+
Sbjct: 1142 TSDELEKLLYKPQDGEWGQRSRDEECERIISGIDQLLNLDIAAAFAGPVDL 1192
Score = 219 (82.2 bits), Expect = 7.9e-80, Sum P(4) = 7.9e-80
Identities = 102/400 (25%), Positives = 177/400 (44%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI +YL GPC AA+VL +E LLP+R DWEG H+++ E+ S+ +V L +
Sbjct: 21 LIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHVAPDHLLQ 80
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
ICQR+GP+LDKE P+ K +V + A G +P
Sbjct: 81 ICQRIGPMLDKEAPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMP 140
Query: 123 -NSVKVHNTVNVLRSREYSGPLSRSL-----MISSHKTSLLVPNSVKVHNTVNVLRS--R 174
N + V++ R ++ +G + S M K + + V R+ R
Sbjct: 141 VNYGPPPSLVDIHRGKQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHR 200
Query: 175 EYSGPLSRFLMI-SSHK---YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKL 230
++G + I S+H S LR H + ++ V ++ +I G+ D +I++
Sbjct: 201 IFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMA----VNYENT--LIAAGSCDKIIRV 254
Query: 231 WRARDGKLLATLRGCSGEI-----SDIAIDNRNILLAAGTVDKTIRIW--NLQTL--API 281
W R +A L+G +G I S +A + +++ G D T+ W +L++L +P
Sbjct: 255 WCLRTCAPVAVLQGHTGSITSLQFSPMAKGPQRYMVSTGA-DGTVCFWQWDLESLKFSPR 313
Query: 282 SVLVGHQGIITGVNF-CP-LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFN 339
+ + GV C V G +LA+ STD I Y L + + + E
Sbjct: 314 PLKFTEKPR-PGVQMLCSSFSVGGM-FLATGSTDHVIRM--YFLGFEAPEKIA-ELESHT 368
Query: 340 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
+++ ++ C++ G FL+ GS D R+++ + ++
Sbjct: 369 DKV---DSIQFCNN---GDRFLS-GSRDGTARIWRFEQLE 401
Score = 42 (19.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1214 VQAGRRGQTIVTSRTRG---KQSYNKFSGRGRG 1243
+ AG G + T+G K +N G+G G
Sbjct: 485 LSAGHDGSIFIWDITKGIKMKHYFNMIEGQGHG 517
Score = 40 (19.1 bits), Expect = 9.2e-193, Sum P(4) = 9.2e-193
Identities = 15/51 (29%), Positives = 19/51 (37%)
Query: 621 VDLNGTPYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGER 671
V NG P R R + D + P+I G VE V +N R
Sbjct: 676 VTANGLPNEEGTPRRGSFRRLSLDIQSPPNIGLRRSGQVEGVRQMHQNAPR 726
Score = 40 (19.1 bits), Expect = 5.3e-122, Sum P(3) = 5.3e-122
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 855 KRVRRHTKVKPIQVSLPKQLIPEEVP 880
K+ R TKV P + P Q +VP
Sbjct: 1461 KQFRSQTKVIPQLMCSPSQSTSSKVP 1486
Score = 40 (19.1 bits), Expect = 3.6e-61, Sum P(4) = 3.6e-61
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 610 LPPHLMPPPFLVDLN 624
+P + PPP LVD++
Sbjct: 139 MPVNYGPPPSLVDIH 153
Score = 39 (18.8 bits), Expect = 9.2e-193, Sum P(4) = 9.2e-193
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 844 WIHE-GVNLEPPKRV---RRHTK 862
W + GV+LEPP R RR T+
Sbjct: 869 WTADTGVHLEPPLRTSCRRRVTR 891
>MGI|MGI:1932404 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10090 "Mus musculus" [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IGI;IMP] [GO:0008286
"insulin receptor signaling pathway" evidence=IDA] [GO:0010800
"positive regulation of peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0040008 "regulation of growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043568 "positive regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IDA] [GO:0045840 "positive regulation of mitosis"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 MGI:MGI:1932404 GO:GO:0005634 GO:GO:0008286
GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0045944
GO:GO:0010800 GO:GO:0006606 GO:GO:0040008 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0045840 GO:GO:0033138 GO:GO:0043568
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 HOGENOM:HOG000095265 HSSP:P16649
HOVERGEN:HBG108248 OrthoDB:EOG41ZF90 EMBL:AJ303103 EMBL:AB049460
EMBL:BC049950 EMBL:AK162189 EMBL:AF310251 IPI:IPI00311490
UniGene:Mm.221688 ProteinModelPortal:Q8VDD9 SMR:Q8VDD9
IntAct:Q8VDD9 STRING:Q8VDD9 PhosphoSite:Q8VDD9 PaxDb:Q8VDD9
PRIDE:Q8VDD9 UCSC:uc009qvv.1 InParanoid:Q8VDD9 CleanEx:MM_PHIP
Genevestigator:Q8VDD9 Uniprot:Q8VDD9
Length = 1821
Score = 1196 (426.1 bits), Expect = 2.9e-192, Sum P(4) = 2.9e-192
Identities = 258/551 (46%), Positives = 342/551 (62%)
Query: 169 NVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLI 228
+ L SR+ +G ++ + Y +++ H LGHLS+V+CV FD+ G I TG+DD L+
Sbjct: 148 DTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLV 207
Query: 229 KLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQ 288
K+W DG+LLATLRG + EISD+A++ N ++AAG+ DK IR+W L+T AP++VL GH
Sbjct: 208 KIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHS 267
Query: 289 GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 348
IT + F PL YL+ST DG I FW + D K + P F ER RPG
Sbjct: 268 ASITSLQFSPLCSGSKRYLSSTGADGTICFWLW--DAGTLK-INPRPTKFTERPRPG-VQ 323
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
++CSSFS GG+FLATGS DH +RVY G P I E+E H+DKVDSIQ+S++ RFVS
Sbjct: 324 MICSSFSAGGMFLATGSTDHIIRVYFF-GSGQPEKISELEFHTDKVDSIQFSNTSNRFVS 382
Query: 409 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK--KIKVTMVAWDASDRWVIT 466
GSRDGTA IW +K +W+ I LDM T P + +K K+KVTMVAWD D VIT
Sbjct: 383 GSRDGTARIWQFKRREWKSILLDMAT-RPAGQNLQGIEDKITKMKVTMVAWDRHDNTVIT 441
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS- 525
A+N N +K+W+++ G L+ VL GH +EVFVLE HPFD RVL SAGHDG +I+WD+
Sbjct: 442 AVN-NMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARGV 500
Query: 526 KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELF 585
K R Y F N++EGQG GA+FD K SPDG A TDS+GHLL++G G + I ++F
Sbjct: 501 KVRSY--F-NMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSKYDKIADQMF 557
Query: 586 FHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDT 645
FH+DYR L R F DE T PHLMPPPFLVD++G P+P QRLVPGREN +
Sbjct: 558 FHSDYRPLIRDANNF--VLDEQTQQAPHLMPPPFLVDVDGNPHPSRYQRLVPGRENCREE 615
Query: 646 ELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHGHVYIQTSHVHVLR-SRAN-G 703
+L+P + G +++ P++ QR + ++ V SR N G
Sbjct: 616 QLIPQMGVTSSGLNQVLSQQANQDISPLDSMIQRLQQEQD--LRRSGEAGVSNASRVNRG 673
Query: 704 ESSAATEGTSP 714
S+ +E SP
Sbjct: 674 SVSSTSEVHSP 684
Score = 641 (230.7 bits), Expect = 2.9e-192, Sum P(4) = 2.9e-192
Identities = 126/284 (44%), Positives = 176/284 (61%)
Query: 853 PPKRVRRHTKVKPIQVS-LPKQ-LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFF 910
P K+ + K K + V L + L EE + PS W+ + +P++ P+ PQMGDEV +F
Sbjct: 912 PKKKKPKERKQKRLAVGELTENGLTLEE----WLPSAWITDTLPRRCPFVPQMGDEVYYF 967
Query: 911 KQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVM 970
+QG++ YV+ R IY ++ + PW + L+E EL+K+VGIKYE+ P +CCLKLA +
Sbjct: 968 RQGHEAYVEMARKNKIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLAFL 1026
Query: 971 KPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIE 1029
P+ GKLT F +KYHDMPDVIDF VLRQ ++ A R WN+GDRF S+IDDAWW+GTIE
Sbjct: 1027 DPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRPWNIGDRFRSVIDDAWWFGTIE 1086
Query: 1030 GK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVEPEEIQE 1084
+ P S F Y + WDN + E +SPWD+E P E G S+P+ E +
Sbjct: 1087 SQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDVECRS 1146
Query: 1085 LLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
L+Y P EW RD CE+I+ G+ ++M L +A F+ PVD+
Sbjct: 1147 LIYKPLDGEWGANPRDEECERIVGGINQLMTLDIASAFVAPVDL 1190
Score = 191 (72.3 bits), Expect = 4.7e-74, Sum P(4) = 4.7e-74
Identities = 76/286 (26%), Positives = 121/286 (42%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI ++LE GPC +AA+VL V K LLP R DW G H +T + + ++ L +
Sbjct: 18 LIARFLEDGPCQQAAQVLIREVAEKELLPRRTDWTGKEHPRTYQNLVKYYRHLAPDHLLQ 77
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH-GTSLLV 121
IC RLGPLL++E+ + P KS K V+ +A H G
Sbjct: 78 ICHRLGPLLEQEIPQSVPGVQTLLGAGRQSLLRTNKS-CKHVVWKGSALAALHCGRPPES 136
Query: 122 P-NSVKVHNTVNVLRSREYSGPLSRSLMISS--------HKTSLLVPNSVKVHNTVNVLR 172
P N + + L SR+ +G ++ + HK L +SV T +
Sbjct: 137 PVNYGSPPSIADTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCV-TFDRTG 195
Query: 173 SREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR 232
R ++G S ++ + R GH + + + + +I G+ D +I++W
Sbjct: 196 RRIFTG--SDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWC 253
Query: 233 ARDGKLLATLRGCSGEISDIAID-----NRNILLAAGTVDKTIRIW 273
R LA L+G S I+ + ++ L + G D TI W
Sbjct: 254 LRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGA-DGTICFW 298
Score = 63 (27.2 bits), Expect = 2.9e-192, Sum P(4) = 2.9e-192
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVKP 865
W + G+NL+PPK+V +H KP
Sbjct: 855 WTADAGINLQPPKKVPKHKTKKP 877
Score = 43 (20.2 bits), Expect = 2.9e-192, Sum P(4) = 2.9e-192
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 1353 GSRRARRTRTKGQSYAVHXXXXXXXXXXXXX-QAAQVSF--SRRGRMRKPTAKLR 1404
GS RTR +G+ A + + ++F S RGR+RK T K +
Sbjct: 1761 GSEPHMRTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTSSRGRVRKLTEKAK 1815
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 1023 WWW--GTIEGKPSPTK 1036
W W GT++ P PTK
Sbjct: 298 WLWDAGTLKINPRPTK 313
Score = 39 (18.8 bits), Expect = 5.8e-129, Sum P(4) = 5.8e-129
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 1045 LWDNNERENLSPWDLEPPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCE 1104
L+++ +++ LS D E +E K+A PG S + R + C+
Sbjct: 1271 LYNSMKKKVLS--DSE--EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQ 1326
Query: 1105 KIITGLEEVMGLSVAEPFLVPVDI 1128
++ L + +EPF PVD+
Sbjct: 1327 EL---LNLIFQCEDSEPFRQPVDL 1347
>UNIPROTKB|Q9NSI6 [details] [associations]
symbol:BRWD1 "Bromodomain and WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AJ238214 EMBL:AJ292465 EMBL:AJ292466
EMBL:AB080586 EMBL:AB080587 EMBL:AF064861 EMBL:AF129408
EMBL:BC064602 EMBL:AL163279 EMBL:AJ222636 EMBL:AK002177
IPI:IPI00250716 IPI:IPI00289944 IPI:IPI00746752
RefSeq:NP_001007247.1 RefSeq:NP_061836.2 RefSeq:NP_387505.1
UniGene:Hs.627139 UniGene:Hs.654740 PDB:3Q2E PDBsum:3Q2E
ProteinModelPortal:Q9NSI6 SMR:Q9NSI6 IntAct:Q9NSI6 STRING:Q9NSI6
DMDM:97535778 PaxDb:Q9NSI6 PRIDE:Q9NSI6 Ensembl:ENST00000333229
Ensembl:ENST00000341322 Ensembl:ENST00000342449
Ensembl:ENST00000380800 GeneID:54014 KEGG:hsa:54014 UCSC:uc002yxk.2
UCSC:uc021wjf.1 CTD:54014 GeneCards:GC21M040556 HGNC:HGNC:12760
HPA:HPA030945 neXtProt:NX_Q9NSI6 PharmGKB:PA134906879
HOVERGEN:HBG080933 InParanoid:Q9NSI6 KO:K11798 OMA:NDNGERS
OrthoDB:EOG470TGD PhylomeDB:Q9NSI6 ChiTaRS:BRWD1
EvolutionaryTrace:Q9NSI6 GenomeRNAi:54014 NextBio:56274
ArrayExpress:Q9NSI6 Bgee:Q9NSI6 CleanEx:HS_BRWD1
Genevestigator:Q9NSI6 GermOnline:ENSG00000185658 Uniprot:Q9NSI6
Length = 2320
Score = 1211 (431.4 bits), Expect = 5.2e-192, Sum P(3) = 5.2e-192
Identities = 244/514 (47%), Positives = 338/514 (65%)
Query: 166 NTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADD 225
N V + R ++ +G + Y +++ H LGHLSAV+CV FD+ G I TG+DD
Sbjct: 148 NLVEIHRGKQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDD 207
Query: 226 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV 285
L+K+W +G+LL+TLRG S EISD+A++ N ++AAG+ DK IR+W L+T AP++VL
Sbjct: 208 CLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQ 267
Query: 286 GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPG 345
GH G IT + F P+ Y+ ST DG + FW++ L+ S P+ F E+ RPG
Sbjct: 268 GHTGSITSLQFSPMAKGSQRYMVSTGADGTVCFWQWDLE---SLKFSPRPLKFTEKPRPG 324
Query: 346 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 405
+LCSSFS GG+FLATGS DH +R+Y + G ++P I E+E H+DKVDSIQ+ ++ R
Sbjct: 325 -VQMLCSSFSVGGMFLATGSTDHVIRMYFL-GFEAPEKIAELESHTDKVDSIQFCNNGDR 382
Query: 406 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVI 465
F+SGSRDGTA IW ++ +WR I LDM T + + +E K KVTM+AW+ +D V+
Sbjct: 383 FLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSSEEERFMKPKVTMIAWNQNDSIVV 442
Query: 466 TAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 525
TA+N + +K+W+++ G L+ L GH +EVFVLE+HPFDSR++LSAGHDG I IWDI +
Sbjct: 443 TAVN-DHVLKVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDI--T 499
Query: 526 KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELF 585
K K + N++EGQG GA+FD K+S DG A TDS+GHLL++G G K + IP ++F
Sbjct: 500 KGTKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGFGCSKPYEKIPDQMF 559
Query: 586 FHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDT 645
FHTDYR L R + + DE T PHLMPPPFLVD++G P+P + QRLVPGREN+ D
Sbjct: 560 FHTDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTKYQRLVPGRENSADE 617
Query: 646 ELLPDI--TTNDDGHV--EIVE-GSERNGERPVE 674
L+P + DG V +I+ + N ER E
Sbjct: 618 HLIPQLGYVATSDGEVIEQIISLQTNDNDERSPE 651
Score = 685 (246.2 bits), Expect = 5.2e-192, Sum P(3) = 5.2e-192
Identities = 132/291 (45%), Positives = 190/291 (65%)
Query: 850 NLEPPKRVRRHTKV-KPIQVSLPKQLIPEEVPDI-----YKPSDWLAEVVPKKAPYYPQM 903
NL PPKR R+ K KP + +L +++ P E+ ++ + P W+ + +K+P+ PQM
Sbjct: 903 NLSPPKRRRKRKKENKPKKENL-RRMTPAELANMEHLYEFHPPVWITDTTLRKSPFVPQM 961
Query: 904 GDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMC 963
GDEV++F+QG++ Y++AVR IYEL+ PW + L++ ELVK+VGI+YE+ PP +C
Sbjct: 962 GDEVIYFRQGHEAYIEAVRRNNIYELNP-NKEPWRKMDLRDQELVKIVGIRYEVGPPTLC 1020
Query: 964 CLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA 1022
CLKLA + P GKL ++ F+I+YHDMPDVIDF VLRQ Y+ A R W DRF S+IDDA
Sbjct: 1021 CLKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFRSIIDDA 1080
Query: 1023 WWWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPV 1077
WW+GT+ + P S F Y + WDN E E LSPWD+EP P E G S+ V
Sbjct: 1081 WWFGTVLSQEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIPDNVDPPEELGASISV 1140
Query: 1078 EPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
+E+++LLY P+ EW Q RD C++II+G+++++ L +A F PVD+
Sbjct: 1141 TTDELEKLLYKPQAGEWGQKSRDEECDRIISGIDQLLNLDIAAAFAGPVDL 1191
Score = 230 (86.0 bits), Expect = 1.8e-80, Sum P(3) = 1.8e-80
Identities = 103/400 (25%), Positives = 178/400 (44%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI +YL GPC AA+VL +E LLP+R DWEG H+++ E+ S+ +V L +
Sbjct: 21 LIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHVAPDHLLQ 80
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
ICQR+GP+LDKE+ P+ K +V + A G +P
Sbjct: 81 ICQRIGPMLDKEIPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMP 140
Query: 123 -NSVKVHNTVNVLRSREYSGPLSRSL-----MISSHKTSLLVPNSVKVHNTVNVLRS--R 174
N N V + R ++ +G + S M K + + V R+ R
Sbjct: 141 VNYGSPPNLVEIHRGKQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHR 200
Query: 175 EYSGPLSRFLMI-SSHK---YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKL 230
++G + I S+H S LR H + ++ V ++ +I G+ D +I++
Sbjct: 201 IFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMA----VNYENT--MIAAGSCDKIIRV 254
Query: 231 WRARDGKLLATLRGCSGEI-----SDIAIDNRNILLAAGTVDKTIRIW--NLQTL--API 281
W R +A L+G +G I S +A ++ +++ G D T+ W +L++L +P
Sbjct: 255 WCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGA-DGTVCFWQWDLESLKFSPR 313
Query: 282 SVLVGHQGIITGVNF-CP-LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFN 339
+ + GV C V G +LA+ STD I Y L + + + E
Sbjct: 314 PLKFTEKPR-PGVQMLCSSFSVGGM-FLATGSTDHVIRM--YFLGFEAPEKIA-ELESHT 368
Query: 340 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
+++ ++ C++ G FL+ GS D R+++ + ++
Sbjct: 369 DKV---DSIQFCNN---GDRFLS-GSRDGTARIWRFEQLE 401
Score = 46 (21.3 bits), Expect = 2.9e-123, Sum P(2) = 2.9e-123
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 850 NLEPPKRVRRHTKVKPIQVSLPKQ 873
NL+P KR++ TK+ P V P Q
Sbjct: 1456 NLKP-KRLKSQTKIIPELVGSPTQ 1478
Score = 42 (19.8 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1214 VQAGRRGQTIVTSRTRG---KQSYNKFSGRGRG 1243
+ AG G + T+G K +N G+G G
Sbjct: 485 LSAGHDGSIFIWDITKGTKMKHYFNMIEGQGHG 517
Score = 42 (19.8 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 37/168 (22%), Positives = 61/168 (36%)
Query: 574 FKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPP--FLVDLNGTPYPPE 631
FK Q +L ++ G +P + NL P + + +L G+P
Sbjct: 1422 FKIGQKFNEKLRRSQRFKQRQNCKGDSQPN-KSIRNLKPKRLKSQTKIIPELVGSPTQST 1480
Query: 632 VQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGE-RPVEVEGQRHYNDHGHVYIQ 690
R + + +T+ D + E SER RP+ G +
Sbjct: 1481 SSRTAYLGTHKTSAGISSGVTSGDSS--DSAESSERRKRNRPI-TNGSTLSESEVEDSLA 1537
Query: 691 TSHVHVLRSRA--NGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHK 736
TS S + + ESS A E +S SG + ++ + V R +Q K
Sbjct: 1538 TSLSSSASSSSEESKESSRARESSSRSGLSRSSNLR--VTRTRAAQRK 1583
Score = 40 (19.1 bits), Expect = 5.2e-192, Sum P(3) = 5.2e-192
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 844 WIHE-GVNLEPPKRV---RRHTK 862
W + G+NL+PP R RR T+
Sbjct: 868 WTADAGINLQPPLRTSCRRRITR 890
Score = 39 (18.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 432 MNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH 491
+ TC+ + K+ ++ +K MV R A N +IKI +L + + G
Sbjct: 2203 VRTCMHNQKDAVQMPSETLKAKMVPEKVPRRCATVAAN---KIKIMS----NLKETISGP 2255
Query: 492 TNEVFVLES 500
N V++ +S
Sbjct: 2256 EN-VWIRKS 2263
>UNIPROTKB|Q8WWQ0 [details] [associations]
symbol:PHIP "PH-interacting protein" species:9606 "Homo
sapiens" [GO:0006606 "protein import into nucleus" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0033138 "positive regulation of
peptidyl-serine phosphorylation" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005158 "insulin receptor binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008286 "insulin
receptor signaling pathway" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0001932 "regulation of
protein phosphorylation" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0043568 "positive regulation of insulin-like growth factor
receptor signaling pathway" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0022604 "regulation of cell
morphogenesis" evidence=IMP] [GO:0045840 "positive regulation of
mitosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005634 GO:GO:0008286
GO:GO:0045893 GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 EMBL:CH471051
eggNOG:COG2319 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0045840
GO:GO:0001932 GO:GO:0033138 GO:GO:0043568 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 HOVERGEN:HBG108248 GO:GO:0005158 EMBL:AL450327
EMBL:AJ303102 EMBL:AL356776 EMBL:BC008909 EMBL:BC021905
EMBL:BC081569 EMBL:BC137488 EMBL:AK057039 EMBL:AK075124
EMBL:AL161957 EMBL:AF310250 IPI:IPI00291916 RefSeq:NP_060404.3
UniGene:Hs.511817 UniGene:Hs.606356 PDB:3MB3 PDBsum:3MB3
ProteinModelPortal:Q8WWQ0 SMR:Q8WWQ0 IntAct:Q8WWQ0
MINT:MINT-1422606 STRING:Q8WWQ0 PhosphoSite:Q8WWQ0 DMDM:308153472
PaxDb:Q8WWQ0 PRIDE:Q8WWQ0 Ensembl:ENST00000275034 GeneID:55023
KEGG:hsa:55023 UCSC:uc011dyp.2 CTD:55023 GeneCards:GC06M079644
H-InvDB:HIX0032894 HGNC:HGNC:15673 MIM:612870 neXtProt:NX_Q8WWQ0
PharmGKB:PA33265 InParanoid:Q8WWQ0 KO:K11797 OMA:PGTIQVN
OrthoDB:EOG41ZF90 ChiTaRS:PHIP EvolutionaryTrace:Q8WWQ0
GenomeRNAi:55023 NextBio:58406 ArrayExpress:Q8WWQ0 Bgee:Q8WWQ0
CleanEx:HS_PHIP Genevestigator:Q8WWQ0 Uniprot:Q8WWQ0
Length = 1821
Score = 1192 (424.7 bits), Expect = 2.9e-191, Sum P(4) = 2.9e-191
Identities = 249/514 (48%), Positives = 328/514 (63%)
Query: 169 NVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLI 228
+ L SR+ +G ++ + Y +++ H LGHLS+V+CV FD+ G I TG+DD L+
Sbjct: 148 DTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLV 207
Query: 229 KLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQ 288
K+W DG+LLATLRG + EISD+A++ N ++AAG+ DK IR+W L+T AP++VL GH
Sbjct: 208 KIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHS 267
Query: 289 GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 348
IT + F PL YL+ST DG I FW + D K + P F ER RPG
Sbjct: 268 ASITSLQFSPLCSGSKRYLSSTGADGTICFWLW--DAGTLK-INPRPAKFTERPRPG-VQ 323
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
++CSSFS GG+FLATGS DH +RVY G P I E+E H+DKVDSIQ+S++ RFVS
Sbjct: 324 MICSSFSAGGMFLATGSTDHIIRVYFF-GSGQPEKISELEFHTDKVDSIQFSNTSNRFVS 382
Query: 409 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK--KIKVTMVAWDASDRWVIT 466
GSRDGTA IW +K +W+ I LDM T P + +K K+KVTMVAWD D VIT
Sbjct: 383 GSRDGTARIWQFKRREWKSILLDMAT-RPAGQNLQGIEDKITKMKVTMVAWDRHDNTVIT 441
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS- 525
A+N N +K+W+++ G L+ VL GH +EVFVLE HPFD RVL SAGHDG +I+WD+
Sbjct: 442 AVN-NMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARGV 500
Query: 526 KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELF 585
K R Y F N++EGQG GA+FD K SPDG A TDS+GHLL++G G + I ++F
Sbjct: 501 KIRSY--F-NMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSKYDKIADQMF 557
Query: 586 FHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDT 645
FH+DYR L R F DE T PHLMPPPFLVD++G P+P QRLVPGREN +
Sbjct: 558 FHSDYRPLIRDANNF--VLDEQTQQAPHLMPPPFLVDVDGNPHPSRYQRLVPGRENCREE 615
Query: 646 ELLPDITTNDDGHVEIVEGSERNGERPVEVEGQR 679
+L+P + G +++ P++ QR
Sbjct: 616 QLIPQMGVTSSGLNQVLSQQANQEISPLDSMIQR 649
Score = 648 (233.2 bits), Expect = 2.9e-191, Sum P(4) = 2.9e-191
Identities = 126/286 (44%), Positives = 178/286 (62%)
Query: 851 LEPPKRVRRHTKVKPIQVS-LPKQ-LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 908
+ P K+ + K K + V L + L EE + PS W+ + +P++ P+ PQMGDEV
Sbjct: 910 ISPKKKKPKERKQKRLAVGELTENGLTLEE----WLPSTWITDTIPRRCPFVPQMGDEVY 965
Query: 909 FFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLA 968
+F+QG++ YV+ R IY ++ + PW + L+E EL+K+VGIKYE+ P +CCLKLA
Sbjct: 966 YFRQGHEAYVEMARKNKIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLA 1024
Query: 969 VMKPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGT 1027
+ P+ GKLT F +KYHDMPDVIDF VLRQ ++ A R WN+GDRF S+IDDAWW+GT
Sbjct: 1025 FLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGDRFRSVIDDAWWFGT 1084
Query: 1028 IEGK-PSPTKSP---FLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVEPEEI 1082
IE + P + P F Y + WDN + E +SPWD+E P E G S+P+ E
Sbjct: 1085 IESQEPLQLEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDGEC 1144
Query: 1083 QELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
+ L+Y P EW RD CE+I+ G+ ++M L +A F+ PVD+
Sbjct: 1145 RSLIYKPLDGEWGTNPRDEECERIVAGINQLMTLDIASAFVAPVDL 1190
Score = 191 (72.3 bits), Expect = 1.3e-73, Sum P(4) = 1.3e-73
Identities = 76/286 (26%), Positives = 121/286 (42%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI ++LE GPC +AA+VL V K LLP R DW G H +T + + ++ L +
Sbjct: 18 LIARFLEDGPCQQAAQVLIREVAEKELLPRRTDWTGKEHPRTYQNLVKYYRHLAPDHLLQ 77
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH-GTSLLV 121
IC RLGPLL++E+ + P KS K V+ +A H G
Sbjct: 78 ICHRLGPLLEQEIPQSVPGVQTLLGAGRQSLLRTNKS-CKHVVWKGSALAALHCGRPPES 136
Query: 122 P-NSVKVHNTVNVLRSREYSGPLSRSLMISS--------HKTSLLVPNSVKVHNTVNVLR 172
P N + + L SR+ +G ++ + HK L +SV T +
Sbjct: 137 PVNYGSPPSIADTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCV-TFDRTG 195
Query: 173 SREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR 232
R ++G S ++ + R GH + + + + +I G+ D +I++W
Sbjct: 196 RRIFTG--SDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWC 253
Query: 233 ARDGKLLATLRGCSGEISDIAID-----NRNILLAAGTVDKTIRIW 273
R LA L+G S I+ + ++ L + G D TI W
Sbjct: 254 LRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGA-DGTICFW 298
Score = 51 (23.0 bits), Expect = 2.9e-191, Sum P(4) = 2.9e-191
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVKPIQVS 869
W + G+NL+PPK+V ++ K K + S
Sbjct: 855 WTADAGINLQPPKKVPKN-KTKKAESS 880
Score = 43 (20.2 bits), Expect = 2.9e-191, Sum P(4) = 2.9e-191
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 1353 GSRRARRTRTKGQSYAVHXXXXXXXXXXXXX-QAAQVSF--SRRGRMRKPTAKLR 1404
GS RTR +G+ A + + ++F S RGR+RK T K +
Sbjct: 1761 GSEPHMRTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTSSRGRVRKLTEKAK 1815
Score = 40 (19.1 bits), Expect = 2.4e-127, Sum P(4) = 2.4e-127
Identities = 21/84 (25%), Positives = 35/84 (41%)
Query: 1045 LWDNNERENLSPWDLEPPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCE 1104
L+++ +++ LS D E E K+A PG S + R + CE
Sbjct: 1271 LYNSMKKKVLS--DSED--EEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCE 1326
Query: 1105 KIITGLEEVMGLSVAEPFLVPVDI 1128
++ L + +EPF PVD+
Sbjct: 1327 EL---LNLIFQCEDSEPFRQPVDL 1347
>UNIPROTKB|F1MTQ0 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS
GeneTree:ENSGT00700000104382 EMBL:DAAA02003179 IPI:IPI00685238
Ensembl:ENSBTAT00000018087 Uniprot:F1MTQ0
Length = 2322
Score = 1214 (432.4 bits), Expect = 3.2e-191, Sum P(2) = 3.2e-191
Identities = 245/514 (47%), Positives = 338/514 (65%)
Query: 166 NTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADD 225
N V + R ++ +G + Y +++ H LGHLSAV+CV FD+ G I TG+DD
Sbjct: 148 NLVEIHRGKQLTGCSTFSTAFPGAMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDD 207
Query: 226 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV 285
L+K+W +G+LL+TLRG S EISD+A++ N ++AAG+ DK IR+W L+T AP++VL
Sbjct: 208 CLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQ 267
Query: 286 GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPG 345
GH G IT + F P+ Y+ ST DG + FW++ L+ S P+ F E+ RPG
Sbjct: 268 GHTGSITSLQFSPMAKGSQRYMVSTGADGTVCFWQWDLE---SLKFSPRPLKFTEKPRPG 324
Query: 346 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 405
+LCSSFS GG+FLATGS DH +R+Y + G ++P I E+E H+DKVDSIQ+ ++ R
Sbjct: 325 -VQMLCSSFSVGGMFLATGSTDHVIRMYFL-GFEAPEKIAELESHTDKVDSIQFCNNGDR 382
Query: 406 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVI 465
F+SGSRDGTA IW ++ +WR I LDM T + +E K KVTM+AW+ +D V+
Sbjct: 383 FLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSLEEERFMKPKVTMIAWNQNDSIVV 442
Query: 466 TAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 525
TA+N + +K+W+++ G L+ L GH +EVFVLE+HPFDSR++LSAGHDG I IWDI +
Sbjct: 443 TAVN-DHVLKVWNSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDI--T 499
Query: 526 KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELF 585
K K + N++EGQG GA+FD K+S DG A TDS+GHLL++G G K + IP ++F
Sbjct: 500 KGTKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGFGCSKPYEKIPDQMF 559
Query: 586 FHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDT 645
FHTDYR L R + + DE T PHLMPPPFLVD++G P+P + QRLVPGREN+ D
Sbjct: 560 FHTDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTKYQRLVPGRENSADE 617
Query: 646 ELLPDI--TTNDDGHV--EIVE-GSERNGERPVE 674
L+P + DG V +I+ + NGER E
Sbjct: 618 HLVPQLGYVATSDGEVIEQIISLQTNDNGERSPE 651
Score = 686 (246.5 bits), Expect = 3.2e-191, Sum P(2) = 3.2e-191
Identities = 134/290 (46%), Positives = 189/290 (65%)
Query: 850 NLEPPKRVRRHTKV-KPIQVSLPKQLIPE--EVPDIYK--PSDWLAEVVPKKAPYYPQMG 904
NL PPKR R+ K KP + +L + E +V +Y+ P W+ + +K+P+ PQMG
Sbjct: 903 NLSPPKRRRKRKKENKPKKENLRRMTQAELADVEHLYEFHPPVWITDTTLRKSPFVPQMG 962
Query: 905 DEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCC 964
DEV++F+QG++ Y++AVR IYEL+ PW + L++ ELVK+VGI+YE+ PP +CC
Sbjct: 963 DEVIYFRQGHEAYIEAVRRNNIYELNP-NKEPWRKMDLRDQELVKIVGIRYEVGPPTLCC 1021
Query: 965 LKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAW 1023
LKLA + P GKL ++ F+I+YHDMPDVIDF VLRQ Y+ A R W DRF S+IDDAW
Sbjct: 1022 LKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFRSIIDDAW 1081
Query: 1024 WWGTI-EGKPSPTKSP---FLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVE 1078
W+GT+ +P + P F Y + WDN E E LSPWD+EP P E G S+ V
Sbjct: 1082 WFGTVLRQEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIPDNVDPPEELGASISVT 1141
Query: 1079 PEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
+E+++LLY P+ EW Q RD CE+II+G+++++ L +A F PVD+
Sbjct: 1142 SDELEKLLYKPQDGEWGQKSRDEECERIISGIDQLLNLDIAAAFAGPVDL 1191
Score = 230 (86.0 bits), Expect = 9.0e-82, Sum P(2) = 9.0e-82
Identities = 103/400 (25%), Positives = 178/400 (44%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK 62
LI +YL GPC AA+VL +E LLP+R DWEG H+++ E+ S+ +V L +
Sbjct: 21 LIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHVAPDHLLQ 80
Query: 63 ICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP 122
ICQR+GP+LDKE+ P+ K +V + A G +P
Sbjct: 81 ICQRIGPMLDKEIPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMP 140
Query: 123 -NSVKVHNTVNVLRSREYSGPLSRSL-----MISSHKTSLLVPNSVKVHNTVNVLRS--R 174
N N V + R ++ +G + S M K + + V R+ R
Sbjct: 141 VNYGSPPNLVEIHRGKQLTGCSTFSTAFPGAMYQHIKMHRRILGHLSAVYCVAFDRTGHR 200
Query: 175 EYSGPLSRFLMI-SSHK---YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKL 230
++G + I S+H S LR H + ++ V ++ +I G+ D +I++
Sbjct: 201 IFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMA----VNYENT--MIAAGSCDKIIRV 254
Query: 231 WRARDGKLLATLRGCSGEI-----SDIAIDNRNILLAAGTVDKTIRIW--NLQTL--API 281
W R +A L+G +G I S +A ++ +++ G D T+ W +L++L +P
Sbjct: 255 WCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGA-DGTVCFWQWDLESLKFSPR 313
Query: 282 SVLVGHQGIITGVNF-CP-LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFN 339
+ + GV C V G +LA+ STD I Y L + + + E
Sbjct: 314 PLKFTEKPR-PGVQMLCSSFSVGGM-FLATGSTDHVIRM--YFLGFEAPEKIA-ELESHT 368
Query: 340 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
+++ ++ C++ G FL+ GS D R+++ + ++
Sbjct: 369 DKV---DSIQFCNN---GDRFLS-GSRDGTARIWRFEQLE 401
Score = 42 (19.8 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1214 VQAGRRGQTIVTSRTRG---KQSYNKFSGRGRG 1243
+ AG G + T+G K +N G+G G
Sbjct: 485 LSAGHDGSIFIWDITKGTKMKHYFNMIEGQGHG 517
Score = 41 (19.5 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 432 MNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH 491
M TC+ + K+ ++ +K MV R A N +IKI +L + + G
Sbjct: 2205 MRTCVHNQKDAVPMPSETLKAKMVPEKVPRRCATVAAN---KIKIMS----NLKETISGP 2257
Query: 492 TNEVFVLES 500
N V++ +S
Sbjct: 2258 EN-VWIRKS 2265
Score = 38 (18.4 bits), Expect = 9.7e-123, Sum P(2) = 9.7e-123
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 674 EVEGQRHYNDHGHVYIQTSHVHVLRSRANG----ESSAATEGTSPSGTAPTAQNKN--FV 727
E + + H +D+GH +L+ +A E A +E S + KN F+
Sbjct: 1753 EEDSKSHDSDNGHSRTAGPSTSLLKLKAESISEEEEKANSETRKYSSRKYSTGRKNAPFL 1812
Query: 728 KRLPL 732
K+ L
Sbjct: 1813 KKAKL 1817
Score = 37 (18.1 bits), Expect = 1.2e-122, Sum P(2) = 1.2e-122
Identities = 12/54 (22%), Positives = 22/54 (40%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKK 896
W + G++L+PP R ++ S ++ E + + E PKK
Sbjct: 868 WTADAGIHLQPPLRTSSRRRITRFCSSSEDEMSAENLSPPKRRRKRKKENKPKK 921
>ZFIN|ZDB-GENE-041111-120 [details] [associations]
symbol:brwd1 "bromodomain and WD repeat domain
containing 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 ZFIN:ZDB-GENE-041111-120 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 EMBL:BX088654
EMBL:CT573306 IPI:IPI00898300 Ensembl:ENSDART00000115034
Uniprot:E7F145
Length = 2008
Score = 1204 (428.9 bits), Expect = 9.4e-191, Sum P(4) = 9.4e-191
Identities = 243/494 (49%), Positives = 328/494 (66%)
Query: 194 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIA 253
++ H LGHLSAV+C+ FD+ G I TG+DD L+K+W + DG+L +TLRG EISD+A
Sbjct: 1 MKMHRRILGHLSAVYCIAFDRTGSRIFTGSDDALVKIWSSFDGRLHSTLRGHYAEISDLA 60
Query: 254 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 313
++ N L+AAG+ DKTIR+W L+T AP++VL GH G IT + F P Y+ ST TD
Sbjct: 61 VNFENTLIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFVKGSKRYMVSTGTD 120
Query: 314 GCIGFWKYKLDIDISKTVFHEPV-MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
+ FW++ D++ F + F ER RPG +CSSFSPGG+FLATGS D +R+
Sbjct: 121 ATVCFWQW----DVNNNEFSDRQHKFTERPRPG-VQTVCSSFSPGGMFLATGSTDDVIRI 175
Query: 373 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW-YYKCSQWRFIRLD 431
Y + G SP + E++ H+DKVDSIQ+ HS RFVSGSRDGTA IW ++ QW+ + LD
Sbjct: 176 YYL-GSGSPEKLAELDSHTDKVDSIQFCHSGERFVSGSRDGTARIWRLHQRHQWKSVLLD 234
Query: 432 MNTCLPHTKETSDETNK-KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
M+ LP + +D+ N K KVTMV+WD D VITA+N N +K+W+++ G L+ VLKG
Sbjct: 235 MSATLPGSAPLTDDENFFKPKVTMVSWDRHDNTVITAVN-NHLLKVWNSYTGQLLHVLKG 293
Query: 491 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFH--NIVEGQGEGALFDG 548
H EVFVLE HP+D R++LSAGHDG + +WD++ +G K H N++EGQG GA+FD
Sbjct: 294 HEAEVFVLEPHPYDPRIMLSAGHDGNVFVWDLI----KGTKTMHYFNMIEGQGHGAVFDC 349
Query: 549 KWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVT 608
K++PDG A+TDS+GHL+++G G K + +P ++FFHTDYR L R F DE T
Sbjct: 350 KFTPDGHRFAMTDSHGHLVIFGFGSSKPYEKLPDQVFFHTDYRPLIRDTNGF--VLDEQT 407
Query: 609 NLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDTELLPDI--TTNDDGHVEIVEGSE 666
PHLMPPPFLVD++G P+PP QRLVPGREN D L+P + DG E+VE +
Sbjct: 408 QQAPHLMPPPFLVDVDGNPHPPRFQRLVPGRENIADEHLVPQLGYVATSDG--EVVE--Q 463
Query: 667 RNGERPVEVEGQRH 680
++ E E RH
Sbjct: 464 VISQQSAESEEVRH 477
Score = 645 (232.1 bits), Expect = 9.4e-191, Sum P(4) = 9.4e-191
Identities = 126/288 (43%), Positives = 179/288 (62%)
Query: 849 VNLEPPKRVRRHTKVKPI--QVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDE 906
V E R+H K K + S P+ I E+ + ++P W+ +VVP+K+P+ PQMGDE
Sbjct: 736 VGEEETSSPRKHKKAKSKTPKHSKPRPSINREISNEFRPPAWITDVVPRKSPFVPQMGDE 795
Query: 907 VMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLK 966
V++F+QG++ YVDAV +Y ++ L PW + L++ E VK+ GIKYE+ PP +CCLK
Sbjct: 796 VIYFRQGHEAYVDAVCRMNLYPIN-LDKQPWKKMQLRDQEFVKITGIKYEVCPPTLCCLK 854
Query: 967 LAVMKPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWW 1025
L + P GK+T+ F+IKYHDM DVIDF VLRQ Y+ A R W DRF S+IDDAWW+
Sbjct: 855 LTQIDPGTGKITDRTFSIKYHDMADVIDFLVLRQSYDEARNRVWTSNDRFRSVIDDAWWF 914
Query: 1026 GTIE-GKPSPTKSP---FLGYKILWDNNERENLSPWDLEPPKEGKEATEPGGS-LPVEPE 1080
G I +P ++ P F +K+ WDN E E LSPWD+E E E E + +PV E
Sbjct: 915 GAIVCHEPYQSEYPDSHFQCFKVKWDNGETEKLSPWDVEAIPENAEQPESASAGVPVTDE 974
Query: 1081 EIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
E+ ++LY P+ EW R+ +II G+E++M + + PF PVD+
Sbjct: 975 EMMDILYKPQRGEWGDRGREQESARIIAGIEQLMTVDITAPFSGPVDL 1022
Score = 80 (33.2 bits), Expect = 1.8e-60, Sum P(5) = 1.8e-60
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 191 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS 250
+S LR HY + L+ V F+ +I G+ D I++W R +A L+G SG I+
Sbjct: 46 HSTLRGHYAEISDLA----VNFENT--LIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSIT 99
Query: 251 DIAID-----NRNILLAAGTVDKTIRIW 273
+ ++ +++ GT D T+ W
Sbjct: 100 SLQFSPFVKGSKRYMVSTGT-DATVCFW 126
Score = 51 (23.0 bits), Expect = 9.4e-191, Sum P(4) = 9.4e-191
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 1190 SDVSDYDSGDRYAMRARQSKQVQSVQAGRRGQTIVTSRTRGKQSYNKFSGRGRGRK 1245
SD D S AMR R+++ + A +G +++R +S+ K +GR R +
Sbjct: 1344 SDEDDEHSSSSRAMR-RETRATRKKAAQNKG-----AKSRRPESHVKMNGRSRSHE 1393
Score = 49 (22.3 bits), Expect = 1.5e-190, Sum P(4) = 1.5e-190
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 1193 SDYDSGDRYAMRARQSKQVQSVQAGRRGQTIVTSRTRGKQSYNKFSGRGRGRK 1245
S DS D A Q + +S + G+ S S++K + R GR+
Sbjct: 1476 SSSDSDDEEEAAASQEESNESGSSASEGEKSAGSADSDSSSHSKKNSRTAGRR 1528
Score = 43 (20.2 bits), Expect = 3.9e-188, Sum P(3) = 3.9e-188
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 1166 ARRMPPRRT-NRV-GTSLGRQYRENPSDVSDYDSGDRYAMRARQSKQVQSVQAGRR 1219
+R P RR +R GT+ R+ R SD D D + R+ +++Q+ G+R
Sbjct: 1949 SRSSPKRRLRDRDRGTARSRKPRRVVSD----DDSDVSFEKPRRGRRIQTRNKGKR 2000
Score = 40 (19.1 bits), Expect = 1.3e-189, Sum P(4) = 1.3e-189
Identities = 13/72 (18%), Positives = 34/72 (47%)
Query: 1166 ARRMPPRRTNRVGTS---LGRQYRENPSDV-SDYDSGDRYAMRARQSKQVQSVQAGRRGQ 1221
A+ P + +++ + L + EN + SDY + + +++ R+S++ + +
Sbjct: 1217 AKAYTPNKRSKIYSMTLRLSAFFEENIRKIISDYKTAIKSSLKLRRSQRCRKKSQHQESV 1276
Query: 1222 TIVTSRTRGKQS 1233
+ TR K++
Sbjct: 1277 SFSQGSTRQKRA 1288
Score = 39 (18.8 bits), Expect = 9.4e-191, Sum P(4) = 9.4e-191
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 1313 RSVRQNGRAKRTNGR 1327
R +NGRA+R+ G+
Sbjct: 1897 RCKSENGRAQRSQGK 1911
Score = 39 (18.8 bits), Expect = 1.8e-60, Sum P(5) = 1.8e-60
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 691 TSHVHVLRSRANGESSAATEGTSPSGTAPTAQNKNFVK 728
T+ + L R +S + G+AP ++NF K
Sbjct: 216 TARIWRLHQRHQWKSVLLDMSATLPGSAPLTDDENFFK 253
Score = 38 (18.4 bits), Expect = 6.3e-127, Sum P(4) = 6.3e-127
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 1098 DRDATCEKIITGLEEVMGLSVAEPFLVPVD 1127
DRDA + L+ + +EPF PVD
Sbjct: 1142 DRDAWKDHCKRLLDYMFECEDSEPFRDPVD 1171
Score = 38 (18.4 bits), Expect = 9.9e-124, Sum P(3) = 9.9e-124
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 698 RSRANGESSAATEGTSPSGTAPTAQNKNFVK 728
+ +N S+A+EG +G+A + + + K
Sbjct: 1490 QEESNESGSSASEGEKSAGSADSDSSSHSKK 1520
>UNIPROTKB|F1NXP9 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0010800 "positive regulation
of peptidyl-threonine phosphorylation" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
GO:GO:0005634 GO:GO:0008286 GO:GO:0007010 GO:GO:0043066
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
GO:GO:0045944 GO:GO:0010800 GO:GO:0006606 GO:GO:0040008
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:AADN02002461 EMBL:AADN02002458 EMBL:AADN02002459
EMBL:AADN02002460 IPI:IPI00574522 Ensembl:ENSGALT00000025610
Uniprot:F1NXP9
Length = 1818
Score = 1206 (429.6 bits), Expect = 1.7e-189, Sum P(3) = 1.7e-189
Identities = 251/515 (48%), Positives = 330/515 (64%)
Query: 168 VNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLL 227
V+ L SR+ +G ++ + Y +++ H LGHLS+V+CV FD+ G I TG+DD L
Sbjct: 137 VDTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCL 196
Query: 228 IKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGH 287
+K+W DG+LLATLRG + EISD+A++ N ++AAG+ DK IR+W L+T AP++VL GH
Sbjct: 197 VKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGH 256
Query: 288 QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 347
IT + F PL YL+ST DG I FW + D K + P F ER RPG
Sbjct: 257 SASITSLQFSPLCSGSKRYLSSTGADGTICFWLW--DAGTLK-INPRPTKFTERPRPG-V 312
Query: 348 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV 407
++CSSFS GG+FLATGS DH +RVY G P I E+E H+DKVDSIQ+S+S RFV
Sbjct: 313 QMICSSFSAGGMFLATGSTDHIIRVYFF-GSGQPEKISELEFHTDKVDSIQFSNSSSRFV 371
Query: 408 SGSRDGTALIWYYKCSQWRFIRLDMNTCLP--HTKETSDETNKKIKVTMVAWDASDRWVI 465
SGSRDGTA IW +K +W+ I LDM T P T + ++ K+KVTMVAWD D VI
Sbjct: 372 SGSRDGTARIWQFKRREWKSILLDMAT-RPSGQTLQGVEDKITKLKVTMVAWDRHDNSVI 430
Query: 466 TAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 525
TA+N N +K+W++F G L+ +L GH +EVFVLE HPFD RVL SAGHDG +I+WD+
Sbjct: 431 TAVN-NMTLKVWNSFTGQLIHILMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARG 489
Query: 526 -KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPREL 584
K R Y F N++EGQG GA+FD K SPDG A TDS+GHLL++G G + I ++
Sbjct: 490 VKIRSY--F-NMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSKYDKIADQM 546
Query: 585 FFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADD 644
FFH+DYR L R F DE T PHLMPPPFLVD++G P+P QRLVPGREN +
Sbjct: 547 FFHSDYRPLIRDANNF--VLDEQTQQAPHLMPPPFLVDVDGNPHPARYQRLVPGRENCRE 604
Query: 645 TELLPDITTNDDGHVEIVEGSERNGERPVEVEGQR 679
+L+P + G +++ P++ QR
Sbjct: 605 EQLIPQMGVTSSGLNQVLSQQANQEVSPLDSMIQR 639
Score = 652 (234.6 bits), Expect = 1.7e-189, Sum P(3) = 1.7e-189
Identities = 129/290 (44%), Positives = 179/290 (61%)
Query: 847 EGVNLEPPKRVRRHTKVKPIQVSLPKQ--LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMG 904
+G + P KR + K K + V + + L EE + PS W+ + VP++ P+ PQMG
Sbjct: 898 DGPSTSPKKRKPKERKQKRLAVGVLAENGLTLEE----WLPSAWITDTVPRRCPFVPQMG 953
Query: 905 DEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCC 964
DEV +F+QG++ YV + IY ++ + PW + L+E EL+K+VGIKYE+ P +CC
Sbjct: 954 DEVYYFRQGHEAYVVMAKKNKIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCC 1012
Query: 965 LKLAVMKPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAW 1023
LKLA + P+ GKLT F +KYHDMPDVIDF VLRQ ++ A R WN+GDRF S+IDDAW
Sbjct: 1013 LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKHRRWNIGDRFRSVIDDAW 1072
Query: 1024 WWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVE 1078
W+GTIE + P S F Y + WDN + E +SPWD+E P E G S+P+
Sbjct: 1073 WFGTIESQEPLQPDYPDSLFQCYNVCWDNGDTEKMSPWDMELIPTNAVFPEELGTSVPLT 1132
Query: 1079 PEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
EE + LLY P EW RD C++II G+ ++M L +A F+ PVD+
Sbjct: 1133 DEERRTLLYKPLDGEWGSRTRDQECDRIIAGINQLMTLDIASAFVAPVDL 1182
Score = 140 (54.3 bits), Expect = 5.2e-68, Sum P(4) = 5.2e-68
Identities = 67/271 (24%), Positives = 111/271 (40%)
Query: 18 KVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPKICQRLGPLLDKELKP 77
+VL V K LLP+R DW G H ++ + + ++ L +IC RLGPLL++E+
Sbjct: 23 QVLIREVAEKELLPKRTDWTGKEHPRSYQNLVKYYRHLAPDHLLQICHRLGPLLEQEIPQ 82
Query: 78 NFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH-GTSLLVP-NSVKVHNTVNVLR 135
+ P KS K V+ +A H G P N + V+ L
Sbjct: 83 SVPGVQTLLGAGRQSLLRTNKS-CKHVVWKGSALAALHCGRPPESPVNYGSPPSIVDTLF 141
Query: 136 SREYSGPLSRSLMISS--------HKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMIS 187
SR+ +G ++ + HK L +SV T + R ++G S ++
Sbjct: 142 SRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCV-TFDRTGRRIFTG--SDDCLVK 198
Query: 188 SHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSG 247
+ R GH + + + + +I G+ D +I++W R LA L+G S
Sbjct: 199 IWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSA 258
Query: 248 EISDIAID-----NRNILLAAGTVDKTIRIW 273
I+ + ++ L + G D TI W
Sbjct: 259 SITSLQFSPLCSGSKRYLSSTGA-DGTICFW 288
Score = 52 (23.4 bits), Expect = 1.1e-128, Sum P(4) = 1.1e-128
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 844 WIHE-GVNLEPPKRVRRHTKVKPIQVSLPKQLIPEE 878
W + G+NL+PPK++ + K K + S + PE+
Sbjct: 847 WTADAGINLQPPKKIPK-LKTKKAESSSEDEEGPEK 881
Score = 49 (22.3 bits), Expect = 5.2e-68, Sum P(4) = 5.2e-68
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 363 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 403
T G+ VRVY+ + + ++ + +K+ + +HSH
Sbjct: 731 TAKGEEEVRVYRSE--EKRKHVMSHIQRENKIPTFSKNHSH 769
Score = 41 (19.5 bits), Expect = 1.1e-128, Sum P(4) = 1.1e-128
Identities = 19/85 (22%), Positives = 35/85 (41%)
Query: 1044 ILWDNNERENLSPWDLEPPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATC 1103
+L++ +++ LS D E E K+ PG S + + R + C
Sbjct: 1262 LLYNAMKKKVLSDSDEE---EEKDTNVPGTSTRKRKDHQPKRRLRNRAQSYDIQSWKKQC 1318
Query: 1104 EKIITGLEEVMGLSVAEPFLVPVDI 1128
+++ L + +EPF PVD+
Sbjct: 1319 QEL---LNLIFQCEDSEPFRQPVDL 1340
Score = 38 (18.4 bits), Expect = 1.7e-189, Sum P(3) = 1.7e-189
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 1359 RTRTKGQSYAVHXXXXXXXXXXXXX-QAAQVSF--SRRGRMRKPTAKLR 1404
RTR +G+ A + + ++F S RGR+RK T K +
Sbjct: 1764 RTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTSSRGRVRKLTEKAK 1812
>TAIR|locus:2061997 [details] [associations]
symbol:AT2G47410 "AT2G47410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0080008
KO:K11797 IPI:IPI00537086 RefSeq:NP_850474.3 UniGene:At.36365
ProteinModelPortal:F4IL43 PRIDE:F4IL43 EnsemblPlants:AT2G47410.1
GeneID:819354 KEGG:ath:AT2G47410 OMA:CDSSMIP Uniprot:F4IL43
Length = 1520
Score = 317 (116.6 bits), Expect = 6.8e-62, Sum P(4) = 6.8e-62
Identities = 76/243 (31%), Positives = 121/243 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH +AV+C +FD+ G ++TG+DD L+K+W LA+ RG G+I+D+A+ + N L+
Sbjct: 234 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALV 293
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+ + D IR+W L PISVL GH G +T + F P + + + L+S S DG W
Sbjct: 294 ASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSS-SDDGTCRIWDA 352
Query: 322 KLDIDISKTVFHEPVMFN--ERIRPGNAH-ILCSSFSPGGLFLATGSGDHHVRVYK---- 374
+ + + P N +H ILC +++ G TGS D + RV+
Sbjct: 353 RYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVWSASKP 412
Query: 375 -MDGVDSPLGILEV-EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 432
+D + P L+V H + V+ +Q+S + S + D Y K F ++
Sbjct: 413 NLDDAEQPTHELDVLRGHENDVNYVQFSGCAVAPKSSTADALKEDSYPKFKNSWFCHDNI 472
Query: 433 NTC 435
TC
Sbjct: 473 VTC 475
Score = 267 (99.0 bits), Expect = 6.8e-62, Sum P(4) = 6.8e-62
Identities = 82/252 (32%), Positives = 119/252 (47%)
Query: 403 HLRFVSGSRDGTALIW-------YYKCSQW-RFIRLDMNTC-LPHTKETSDETNKKIK-- 451
H V+ SRDG+A+IW + K +W + L + LP + +
Sbjct: 469 HDNIVTCSRDGSAIIWTPRSRKFHGKSGRWMKGYHLKVPPPPLPPQPPRGGPRQRFLPTP 528
Query: 452 --VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 509
V M+ W +R+V+ AI + +I +W+A +G LV L GH+ +VL+ HPF+ R+ +
Sbjct: 529 RGVNMIIWSLDNRFVLAAI-MDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAM 587
Query: 510 SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 569
SAG+DG IIWDI ++ V G L DGK+S DGT+ L+D G +
Sbjct: 588 SAGYDGKTIIWDI-------WEGIPIKVYEIGRFKLVDGKFSQDGTSIVLSDDVGQIYFL 640
Query: 570 GLGGFKRPQNIPRELFFHTDYRTLNRP-NGLFEPTYDEVTNLPPHLMP-PPFLVDLNGTP 627
G + +N + FF DYR L R NG D+ T L PH L D + P
Sbjct: 641 NTGQGESQKNAKYDQFFLGDYRPLIRDTNG---HVLDQETQLLPHRRNLQDLLCDSSMIP 697
Query: 628 YPPEVQRLVPGR 639
YP Q + R
Sbjct: 698 YPEPDQTMFQQR 709
Score = 186 (70.5 bits), Expect = 6.8e-62, Sum P(4) = 6.8e-62
Identities = 58/235 (24%), Positives = 109/235 (46%)
Query: 845 IHEGVNLEP-PKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKA-PYYPQ 902
+++ +LE P + ++ + VS P + + WL ++ Y PQ
Sbjct: 1176 VYDDASLEEWPSTSKAGSRSRSASVSKPSLHTGIRLNSVSGKISWLLLSEHEEGCRYIPQ 1235
Query: 903 MGDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPR- 961
+GDEV++FKQG+Q+++ ++K + + R R P L E+ KV + Y+ P
Sbjct: 1236 LGDEVIYFKQGHQEFL---KTKELNDRDRSRYLPRN---LGAVEICKVEKLNYDTYPGSG 1289
Query: 962 -MCC-LKLAVMKPNGK-LTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGD----- 1013
CC + L V+ + + + F + ++ + DF V + Y+ AI W +G+
Sbjct: 1290 DSCCKMTLRVLDSSSSHASRKEFQLTLPELINFPDFIVEKTRYDAAIQTNWKIGNECRVW 1349
Query: 1014 -RFCSMIDDAWWWGTIEGKPSPT----KSPFLGYKILWDNNERENLSPWDLEPPK 1063
R + AWW G IE + +SP+ Y+++++ E SPW+ + P+
Sbjct: 1350 WRDATGEGGAWWEGRIESSQVKSTDFPESPWERYRVVYETGETSLHSPWEFDNPE 1404
Score = 115 (45.5 bits), Expect = 7.2e-18, Sum P(3) = 7.2e-18
Identities = 58/253 (22%), Positives = 111/253 (43%)
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+IL A + K + +Q + I L GH+ + +C + Y+ + S D +
Sbjct: 208 SILSACHAIAKPSTM--VQKMQNIKKLRGHRNAV----YCAIFDRSGRYVITGSDDRLVK 261
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM-D 376
W + + ++ HE + + + NA +A+ S D +RV+++ D
Sbjct: 262 IWSMETALCLASCRGHEGDITDLAVSSNNA------------LVASASNDFVIRVWRLPD 309
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSH---SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 433
G+ P+ +L H+ V +I +S S + +S S DGT IW + SQW R+ +
Sbjct: 310 GM--PISVLR--GHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQW-LPRIYVP 364
Query: 434 TCLPHTKETSDETN--KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL------- 484
+ P T +N + ++ A++A+ +T + + ++W A +L
Sbjct: 365 S--PSDANTGSTSNASQSHQILCCAYNANGTIFVTGSS-DSNARVWSASKPNLDDAEQPT 421
Query: 485 --VQVLKGHTNEV 495
+ VL+GH N+V
Sbjct: 422 HELDVLRGHENDV 434
Score = 111 (44.1 bits), Expect = 2.8e-40, Sum P(4) = 2.8e-40
Identities = 45/181 (24%), Positives = 73/181 (40%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEV 301
LRG + D + G+ D+ ++IW+++T ++ GH+G IT L V
Sbjct: 232 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITD-----LAV 286
Query: 302 NGFNYL-ASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI--LCSSFSPGG 358
+ N L AS S D I W+ + IS H + P A + L SS G
Sbjct: 287 SSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGT 346
Query: 359 LFLATGSGDHHV-RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
+ + R+Y D+ G S ++ ++ + FV+GS D A +
Sbjct: 347 CRIWDARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARV 406
Query: 418 W 418
W
Sbjct: 407 W 407
Score = 97 (39.2 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV--LL 509
+T +A +++ V +A N +F I++W +G + VL+GHT V + P + V LL
Sbjct: 281 ITDLAVSSNNALVASASN-DFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLL 339
Query: 510 SAGHDGLIIIWD 521
S+ DG IWD
Sbjct: 340 SSSDDGTCRIWD 351
Score = 80 (33.2 bits), Expect = 3.2e-15, Sum P(4) = 3.2e-15
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 225 DLLIKLWRARDGKLLATLRGCSGE--ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS 282
D I +W A DG L+ L G S + D+ N I ++AG KTI IW++ PI
Sbjct: 549 DCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTI-IWDIWEGIPIK 607
Query: 283 VL-VGHQGIITG 293
V +G ++ G
Sbjct: 608 VYEIGRFKLVDG 619
Score = 67 (28.6 bits), Expect = 6.8e-62, Sum P(4) = 6.8e-62
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 3 LIIKYLEKGPCHEAAKVLTDLVEAKNLLPERY-DW 36
LI+ +L GPC L D + K LLP RY W
Sbjct: 48 LILHFLSIGPCERTFGHLRDEILEKGLLPRRYHSW 82
Score = 57 (25.1 bits), Expect = 1.7e-48, Sum P(4) = 1.7e-48
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 854 PKRVRRHTKVKPIQVSLPKQLIPEEVPD-IYKPSDWLAEVVP 894
PK+VRR ++K + P++L P+EV D + D A + P
Sbjct: 1063 PKKVRR-LRLKLRHPNSPRKLEPDEVADDLADGGDGFASIAP 1103
Score = 56 (24.8 bits), Expect = 1.3e-34, Sum P(4) = 1.3e-34
Identities = 24/103 (23%), Positives = 46/103 (44%)
Query: 131 VNVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMISSHK 190
++VLR ++G ++ ++ S + S+ S T + +R YS L R + + S
Sbjct: 313 ISVLRG--HTGAVT-AIAFSPRQASVYQLLSSSDDGTCRIWDAR-YSQWLPR-IYVPSPS 367
Query: 191 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRA 233
+N N + C ++ G + VTG+ D ++W A
Sbjct: 368 DANTGSTS-NASQSHQILCCAYNANGTIFVTGSSDSNARVWSA 409
Score = 55 (24.4 bits), Expect = 1.0e-12, Sum P(4) = 1.0e-12
Identities = 35/133 (26%), Positives = 53/133 (39%)
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+ L T RG + I ++DNR +L A +D I +WN + + L GH +
Sbjct: 523 RFLPTPRGVNMIIW--SLDNRFVL--AAIMDCRICVWNAADGSLVHCLTGHSE-----SS 573
Query: 297 CPLEVNGFN-YLA-STSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 354
L+V+ FN +A S DG W I I + + + I+ S
Sbjct: 574 YVLDVHPFNPRIAMSAGYDGKTIIWDIWEGIPIKVYEIGRFKLVDGKFSQDGTSIVLSDD 633
Query: 355 SPGGLFLATGSGD 367
FL TG G+
Sbjct: 634 VGQIYFLNTGQGE 646
Score = 47 (21.6 bits), Expect = 1.9e-47, Sum P(4) = 1.9e-47
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 877 EEVPDIYKPSDWLA-EVVPKKAPYYPQMGDEVM 908
EE+P + +P++ A E + + P+Y DE++
Sbjct: 1031 EEIP-VCEPTELTAPENIEEAQPFYGDEADEIL 1062
Score = 40 (19.1 bits), Expect = 9.8e-47, Sum P(4) = 9.8e-47
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 1190 SDVSD-YDSGDRYAMRARQSKQVQSVQAGRRGQTIVTSRTRGKQSYNKFSGR 1240
SDV + ++S + R + K S +GRR + I+ + R
Sbjct: 804 SDVENIHESSYHWKRRRKHPKVNVSTSSGRRDKRILDENDSSNSGIKRTKNR 855
Score = 39 (18.8 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 106 SSYDYIARQHGTSLLVPNSVKVHNTVNVLRSREYSGPLSRSLM 148
SS I R ++V S + H+ V R + + +RSL+
Sbjct: 844 SSNSGIKRTKNRRIVVKASKRKHSDVKASRPQRAAAQNARSLL 886
>RGD|1564964 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10116 "Rattus norvegicus" [GO:0001932 "regulation of
protein phosphorylation" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006606 "protein import into nucleus"
evidence=IEA;ISO] [GO:0007010 "cytoskeleton organization"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA;ISO] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA;ISO] [GO:0010800 "positive
regulation of peptidyl-threonine phosphorylation" evidence=IEA;ISO]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA;ISO]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IEA;ISO] [GO:0040008 "regulation of
growth" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO] [GO:0043568 "positive
regulation of insulin-like growth factor receptor signaling
pathway" evidence=ISO] [GO:0045840 "positive regulation of mitosis"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA;ISO]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1564964 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 GO:GO:0008284 GO:GO:0045944 GO:GO:0010800
GO:GO:0006606 GO:GO:0040008 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 IPI:IPI00911360
Ensembl:ENSRNOT00000011864 Uniprot:F1M3B3
Length = 1196
Score = 642 (231.1 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 126/284 (44%), Positives = 176/284 (61%)
Query: 853 PPKRVRRHTKVKPIQVS-LPKQ-LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFF 910
P K+ + K K + V L + L EE + PS W+ + +P++ P+ PQMGDEV +F
Sbjct: 286 PKKKKPKERKQKRLAVGELTENGLTLEE----WLPSAWITDTLPRRCPFVPQMGDEVYYF 341
Query: 911 KQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVM 970
+QG++ YV+ R IY ++ + PW + L+E EL+K+VGIKYE+ P +CCLKLA +
Sbjct: 342 RQGHEAYVEMARKNRIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLAFL 400
Query: 971 KPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIE 1029
P+ GKLT F +KYHDMPDVIDF VLRQ ++ A R WN+GDRF S+IDDAWW+GTIE
Sbjct: 401 DPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGDRFRSVIDDAWWFGTIE 460
Query: 1030 GK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVEPEEIQE 1084
+ P S F Y + WDN + E +SPWD+E P E G S+P+ E +
Sbjct: 461 SQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDVECRS 520
Query: 1085 LLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDI 1128
L+Y P EW RD CE+I+ G+ ++M L +A F+ PVD+
Sbjct: 521 LIYKPLDGEWGANPRDEECERIVGGINQLMTLDIASAFVAPVDL 564
Score = 56 (24.8 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 844 WIHE-GVNLEPPKRVRRH-TK 862
W + G+NL+PPK+V +H TK
Sbjct: 229 WTADAGINLQPPKKVPKHKTK 249
Score = 43 (20.2 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 1353 GSRRARRTRTKGQSYAVHXXXXXXXXXXXXX-QAAQVSF--SRRGRMRKPTAKLR 1404
GS RTR +G+ A + + ++F S RGR+RK T K +
Sbjct: 1136 GSEPHMRTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTSSRGRVRKLTEKAK 1190
>TAIR|locus:2158044 [details] [associations]
symbol:AT5G49430 "AT5G49430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0080008 KO:K11797 IPI:IPI00523511
RefSeq:NP_199754.2 UniGene:At.51087 ProteinModelPortal:F4K639
PRIDE:F4K639 EnsemblPlants:AT5G49430.1 GeneID:835003
KEGG:ath:AT5G49430 OMA:CCAFNAN Uniprot:F4K639
Length = 1677
Score = 278 (102.9 bits), Expect = 1.8e-58, Sum P(4) = 1.8e-58
Identities = 76/249 (30%), Positives = 121/249 (48%)
Query: 173 SREYSGPLSRFLMISSHKYSNLRQHYVNL----GHLSAVFCVLFDKLGEVIVTGADDLLI 228
+R + P R K S++ Q N+ GH +AV+C + D+ G ++TG+DD L+
Sbjct: 210 ARHHRAPSIRAACYVIAKPSSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLV 269
Query: 229 KLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQ 288
K+W LA+ RG G+I+D+A+ + NI +A+ + D IR+W L P+SVL GH
Sbjct: 270 KVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHT 329
Query: 289 GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF--HEPVMFNERIRPG- 345
G +T + F P + + L+S S DG W + + ++ P + P
Sbjct: 330 GAVTAIAFSPRPGSPYQLLSS-SDDGTCRIWDAR-GAQFAPRIYVPRPPSPDGKNSGPSS 387
Query: 346 -NA---H-ILCSSFSPGGLFLATGSGDHHVRVYKM--------DGVDSPLGILEV-EEHS 391
NA H I C +F+ G TGS D RVY + D + P ++V H
Sbjct: 388 SNAQQSHQIFCCAFNASGSVFVTGSSDTLARVYSVWSANKTNTDDPEQPNHEMDVLAGHE 447
Query: 392 DKVDSIQWS 400
+ V+ +Q+S
Sbjct: 448 NDVNYVQFS 456
Score = 257 (95.5 bits), Expect = 1.8e-58, Sum P(4) = 1.8e-58
Identities = 80/262 (30%), Positives = 125/262 (47%)
Query: 388 EEHSDKVDSIQWSHSHLRFVSGSRDGTALIW-------YYKCSQW-RFIRLDMNTC-LPH 438
+E+ K + + H ++ V+ SRDG+A+IW + K +W R L + +P
Sbjct: 472 DENVPKFKNSWFCHDNI--VTCSRDGSAIIWIPRLRRSHGKSCRWTRAYHLKVPPPPMPP 529
Query: 439 TKETSDETNKKIK----VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNE 494
+ + V M+AW +R+V+ AI + +I +W+A +G LV L GHT
Sbjct: 530 QPPRGGPRQRILPTPRGVNMIAWSLDNRFVLAAI-MDCRICVWNASDGSLVHSLTGHTAS 588
Query: 495 VFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVEGQGEGALFDGKWSPD 553
+V++ HPF+ R+ +SAG+DG I+WDI + Y H L DGK+SPD
Sbjct: 589 TYVMDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHY--------KLVDGKFSPD 640
Query: 554 GTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPH 613
GT+ L+D G L + G ++ + FF DYR L + + D+ + L P+
Sbjct: 641 GTSIILSDDVGQLYILSTGQGDSQKDAKYDQFFLGDYRPLIQDT--YGNVLDQESQLQPY 698
Query: 614 L--MPPPFLVDLNGTPYPPEVQ 633
M P L D PY Q
Sbjct: 699 RRNMEDP-LCDSGMIPYEEPYQ 719
Score = 219 (82.2 bits), Expect = 1.8e-58, Sum P(4) = 1.8e-58
Identities = 70/216 (32%), Positives = 109/216 (50%)
Query: 861 TKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAP-YYPQMGDEVMFFKQGYQKYVD 919
++ KPI+ P+QLI E V WL + ++ Y PQMGDEV + +QG+Q+Y++
Sbjct: 1357 SETKPIETKKPQQLI-ENV-------SWLTLSIHEEGSRYIPQMGDEVAYLRQGHQEYLN 1408
Query: 920 AVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPR--MCC-LKLAVMKPNGKL 976
+ E++ S GN+ + E+ KV ++Y P CC + L V+ PN ++
Sbjct: 1409 F---SSLREVAPWTSIKGGNI--KAVEICKVESLEYATLPGSGDSCCKMILKVIDPNSEV 1463
Query: 977 TNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMI-------DDAWWWGTIE 1029
N+ F + ++ DF V R YE AI R W D+ C + D +WW G I
Sbjct: 1464 FNKAFKLTLPEVVTFPDFLVERSRYEAAIQRNWTCRDK-CKVWWRDEGEEDGSWWEGRIL 1522
Query: 1030 G-KP-SPT--KSPFLGYKILWDNNERE-NL-SPWDL 1059
KP SP SP+ Y + + ++ E +L SPW+L
Sbjct: 1523 AVKPKSPDFPDSPWERYTVKYKSDPAETHLHSPWEL 1558
Score = 89 (36.4 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 225 DLLIKLWRARDGKLLATLRG--CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS 282
D I +W A DG L+ +L G S + D+ N I ++AG KTI +W++ PI
Sbjct: 565 DCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAGYDGKTI-VWDIWEGIPIQ 623
Query: 283 VL-VGHQGIITGVNFCP 298
+ + H ++ G F P
Sbjct: 624 IYDISHYKLVDG-KFSP 639
Score = 87 (35.7 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 70/315 (22%), Positives = 127/315 (40%)
Query: 275 LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 334
+Q + I L GH+ + +C + Y+ + S D + W ++ HE
Sbjct: 232 VQKMQNIKRLRGHRNAV----YCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHE 287
Query: 335 PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM-DGVDSPLGILEVEEHSDK 393
G+ L + S +F+A+ S D +RV+++ DG+ P+ +L H+
Sbjct: 288 ----------GDITDL--AVSSNNIFIASASNDCVIRVWRLPDGL--PVSVLR--GHTGA 331
Query: 394 VDSIQWSH---SHLRFVSGSRDGTALIWYYKCSQWR---FIRLDMNTCLPHTKETSDETN 447
V +I +S S + +S S DGT IW + +Q+ ++ + ++ +S
Sbjct: 332 VTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQ 391
Query: 448 KKIKVTMVAWDASDRWVITAINFNFQ--IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
+ ++ A++AS +T + +W A N + +E+ VL H D
Sbjct: 392 QSHQIFCCAFNASGSVFVTGSSDTLARVYSVWSA-NKTNTDDPEQPNHEMDVLAGHENDV 450
Query: 506 RVLLSAG--HDGLIIIWDILSSKQ-RGYK--WF-H-NIVEGQGEGALFDGKWSP-----D 553
+ +G + D + +K WF H NIV +G+ W P
Sbjct: 451 NYVQFSGCAAGSKFSVTDYSKDENVPKFKNSWFCHDNIVTCSRDGSAII--WIPRLRRSH 508
Query: 554 GTTCALTDSYGHLLV 568
G +C T +Y HL V
Sbjct: 509 GKSCRWTRAY-HLKV 522
Score = 73 (30.8 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 37/134 (27%), Positives = 59/134 (44%)
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
++L T RG + + ++DNR +L A +D I +WN + + L GH T +
Sbjct: 539 RILPTPRGVN--MIAWSLDNRFVL--AAIMDCRICVWNASDGSLVHSLTGH----TASTY 590
Query: 297 CPLEVNGFN-YLA-STSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 354
++V+ FN +A S DG W I I + + + P I+ S
Sbjct: 591 V-MDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILSD- 648
Query: 355 SPGGLF-LATGSGD 367
G L+ L+TG GD
Sbjct: 649 DVGQLYILSTGQGD 662
Score = 54 (24.1 bits), Expect = 1.8e-58, Sum P(4) = 1.8e-58
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 3 LIIKYLEKGPCHEAAKVLT-DLVEAKNLLPERYD-W 36
L++ L GPC + +L +L+E + LLP RY W
Sbjct: 55 LMLHLLSSGPCQKTYALLRHELLEHE-LLPRRYHAW 89
Score = 41 (19.5 bits), Expect = 5.1e-40, Sum P(4) = 5.1e-40
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 1165 KARRMPPRRTNRVGTSLGRQYRENPSDVSDYDSGDRYAMRARQSKQVQSVQAGRRGQTIV 1224
+++R ++ + TS GR+ ++ D + + R R+S+ + ++ R+
Sbjct: 833 RSKRKKHKKEAGIMTSSGRRVKKRNFD--ELEGAPSNKKRTRKSRSGRK-ESKRKSSKSK 889
Query: 1225 TSRTRGKQSYNKFS 1238
+SR R + N S
Sbjct: 890 SSRPRRAAARNALS 903
Score = 37 (18.1 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 697 LRSRANGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHK 736
LRS N +S+ T P T Q V L LS H+
Sbjct: 1344 LRSTRNRKSTYPFSETKPIETKKPQQLIENVSWLTLSIHE 1383
>DICTYBASE|DDB_G0285837 [details] [associations]
symbol:DDB_G0285837 "BRWD group protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 dictyBase:DDB_G0285837 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
EMBL:AAFI02000080 HSSP:Q03330 RefSeq:XP_638029.1
ProteinModelPortal:Q54MP8 EnsemblProtists:DDB0220685 GeneID:8625294
KEGG:ddi:DDB_G0285837 InParanoid:Q54MP8 OMA:DEITDIY Uniprot:Q54MP8
Length = 2200
Score = 381 (139.2 bits), Expect = 8.8e-37, Sum P(5) = 8.8e-37
Identities = 126/454 (27%), Positives = 214/454 (47%)
Query: 202 GHLSAV--FCVLFDKLGEVIVTGADDLLIKLWRARDGKL--LATLRG----CSGEISDIA 253
GHL + C FD ++ T ++D +I++W + +A+L G + I+ I+
Sbjct: 394 GHLGDITDMCTSFDN--SLLATASNDNVIRIWNLNSNQYDSIASLTGHDPSVNNTITSIS 451
Query: 254 -IDNRNI-LLAAGTVDKTIRIWNL-QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 310
+ N LL + ++WNL ++ IS+ + G + +N +N
Sbjct: 452 FLSNPTTRLLVSSDSFGQCKLWNLDKSNHVISLSLNDNGSQSTINTG--NINDEQIDTEM 509
Query: 311 STDGCIGFWKYK-LDIDISKTVFHEPVMF---NERIRPGNAH-ILCSSFSPGGLFLATGS 365
TD + + I+ T PG + I ++ + GG L S
Sbjct: 510 ITDAEVPILTATTITTAITTTATTATATIATTTTTTTPGKTNEITGTTMNKGGT-LIVAS 568
Query: 366 GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS-Q 424
D ++++ + P + +E H + ++Q+SH VSGS DGT +IW + +
Sbjct: 569 VDSSLKIWSTL-FNPPKLVNTLEGHPTTILALQYSHGSDAIVSGSYDGTVIIWRHSGGPK 627
Query: 425 WRFIRLDM-NTCLPHTKETSDETNKKIKVTM--VAWDASDRWVITAINFNFQIKIWDAFN 481
W + ++ NT P+ + + + K T V W DR++IT ++N I++W++ +
Sbjct: 628 WDHVIFNIKNTQRPNQANSHPKKVARSKATFKNVIWSHDDRFIITT-DYNM-IRVWNSLD 685
Query: 482 GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQG 541
G + HT+EV+V HPFDSR+++S+G+D +I+W I + + K F +++ G
Sbjct: 686 GSFHLEMAEHTSEVYVTSCHPFDSRLIMSSGYDSQVILWSIETGEI--IKKF--VLQEPG 741
Query: 542 -EGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQN----IPRELFFHTDYRTLNRP 596
+ + DG +SPDG +T+S G ++ LG N +P E +F TDY L R
Sbjct: 742 FQCQILDGCFSPDGQKFIVTNSTGKWFMFELGLGSDINNLKKLVPNEQYFLTDYHPLIRD 801
Query: 597 -NGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYP 629
NG DE+T PPHLMP LV+ G PYP
Sbjct: 802 ANG---NVLDELTQTPPHLMPRAMLVNYQGLPYP 832
Score = 215 (80.7 bits), Expect = 3.7e-19, Sum P(5) = 3.7e-19
Identities = 62/198 (31%), Positives = 97/198 (48%)
Query: 128 HNTVNVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMIS 187
+N +++ R+R S + R + + +P VK+ + +S + + L IS
Sbjct: 287 NNILSIQRNRYKSFTMMR---FTENPFDFSIPIPVKLSGQEVISKSLKSTSQLP----IS 339
Query: 188 SHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSG 247
YSN + + GH + +C+ FDK G + TG+DD L+K+W G+L+ATLRG G
Sbjct: 340 F--YSNFKNSLIVYGHKAPTYCLQFDKSGRLYFTGSDDHLVKVWSTYSGRLIATLRGHLG 397
Query: 248 EISDIAIDNRNILLAAGTVDKTIRIWNLQT--LAPISVLVGHQ----GIITGVNFCPLEV 301
+I+D+ N LLA + D IRIWNL + I+ L GH IT ++F L
Sbjct: 398 DITDMCTSFDNSLLATASNDNVIRIWNLNSNQYDSIASLTGHDPSVNNTITSISF--LSN 455
Query: 302 NGFNYLASTSTDGCIGFW 319
L S+ + G W
Sbjct: 456 PTTRLLVSSDSFGQCKLW 473
Score = 105 (42.0 bits), Expect = 8.8e-37, Sum P(5) = 8.8e-37
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 978 NEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA--WWWGTI----EGK 1031
+ F+ + YH + D+ D+ VL ++ +W V ++ M A W+ GTI +
Sbjct: 1347 SNFYTVIYH-VSDIPDYLVLASKVRKSMLTDWTVPNKRFRMFYPASGWYNGTIIEISDSD 1405
Query: 1032 PSPTKSPFLGYKILWDNNEREN-LSPWDLE 1060
P SP+ K+LWD+ E E+ ++ W+++
Sbjct: 1406 PLFPNSPWENIKVLWDDTEEEDRVNYWEID 1435
Score = 99 (39.9 bits), Expect = 2.3e-07, Sum P(5) = 2.3e-07
Identities = 20/70 (28%), Positives = 42/70 (60%)
Query: 457 WDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGL 516
+D S R T + + +K+W ++G L+ L+GH ++ + + FD+ +L +A +D +
Sbjct: 362 FDKSGRLYFTGSDDHL-VKVWSTYSGRLIATLRGHLGDITDMCTS-FDNSLLATASNDNV 419
Query: 517 IIIWDILSSK 526
I IW++ S++
Sbjct: 420 IRIWNLNSNQ 429
Score = 72 (30.4 bits), Expect = 8.8e-37, Sum P(5) = 8.8e-37
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 888 WLAEVVPKKAPYY-PQMGDEVMFFKQGYQKYVDAVRSKGI 926
WL+ +Y PQ+GD + +F QG+ KY++ GI
Sbjct: 1203 WLSITSTTSETFYSPQVGDFIFYFYQGHTKYLEKFPPNGI 1242
Score = 61 (26.5 bits), Expect = 0.00084, Sum P(5) = 0.00084
Identities = 28/128 (21%), Positives = 50/128 (39%)
Query: 351 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS 410
C F G TGS DH V+V+ L I + H + + S + + S
Sbjct: 359 CLQFDKSGRLYFTGSDDHLVKVWST--YSGRL-IATLRGHLGDITDMCTSFDNSLLATAS 415
Query: 411 RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINF 470
D IW +Q+ D L T N ++ ++ + + R ++++ +F
Sbjct: 416 NDNVIRIWNLNSNQY-----DSIASL--TGHDPSVNNTITSISFLS-NPTTRLLVSSDSF 467
Query: 471 NFQIKIWD 478
Q K+W+
Sbjct: 468 G-QCKLWN 474
Score = 44 (20.5 bits), Expect = 8.8e-37, Sum P(5) = 8.8e-37
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 102 KSVLSSYDYIARQHG 116
KS+ SSY +A QHG
Sbjct: 99 KSIFSSYRDLAIQHG 113
Score = 44 (20.5 bits), Expect = 8.8e-37, Sum P(5) = 8.8e-37
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 27 KN-LLPERYDWEGATHSQTLAEVASSHPNVTASFLPKI 63
KN LLP++ +W G + T E+ + ++ + + I
Sbjct: 64 KNDLLPKKVNWLGQQENFTSNELNEKYKHIQSDHIKSI 101
Score = 44 (20.5 bits), Expect = 7.3e-28, Sum P(4) = 7.3e-28
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1188 NPSDVSDYDSGDRYAMRARQSKQ 1210
NPSD S+ S D + +Q +Q
Sbjct: 933 NPSDASENSSEDEQQQQHQQQQQ 955
Score = 43 (20.2 bits), Expect = 9.2e-28, Sum P(4) = 9.2e-28
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 1187 ENPSDVSDYDSGDRYAMRARQSKQVQSVQAGRRGQTIVTSRTRGKQSYNKFS 1238
++ D DYDS D M R+ ++++ + +R TR S +KF+
Sbjct: 959 DDDDDDEDYDS-DGKKMSTRKKSKIKADKRKKRLLKQSKKFTRRNTSPSKFN 1009
Score = 43 (20.2 bits), Expect = 9.2e-28, Sum P(4) = 9.2e-28
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 633 QRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHG 685
+RL+ GR + + ++DDG ++ S +NG + ++ N +G
Sbjct: 1961 KRLITGRLTRSRSNQSNE-ESDDDGFIDDNNSSHQNGGKILDDSDNDDKNQNG 2012
Score = 38 (18.4 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 8/39 (20%), Positives = 20/39 (51%)
Query: 1198 GDRYAMRARQSKQVQSVQAGRRGQTIVTSRTRGKQSYNK 1236
GD+ + K V++ + +RG+ ++ + S+N+
Sbjct: 1138 GDKSKRNKKGKKNVKNKKVQKRGRKKSSTSSSSSTSHNQ 1176
Score = 37 (18.1 bits), Expect = 3.8e-27, Sum P(4) = 3.8e-27
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 641 NADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHGHVYIQTSHVHVLRSR 700
N D E DI+ +D H G +N R + + D G + + + R +
Sbjct: 1890 NGDGLE--GDISISDSEHDNSKTG--KNITRSLLSPSE----DEGGINVNRTPSKRGRKK 1941
Query: 701 ANGESSAATEGTSPSGT 717
AN ++ T T+ S T
Sbjct: 1942 ANATTTTTTTTTTTSST 1958
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 187 (70.9 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 51/154 (33%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 70 GHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 129
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G+ DKT+++W L T + L GH + NF P N + S S D + W
Sbjct: 130 VSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 185
Query: 322 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 354
+ + H +PV R G+ I+ SS+
Sbjct: 186 RTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 218
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 47/194 (24%), Positives = 90/194 (46%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ +IV+G+ D +++W R GK L TL S +S + + L+
Sbjct: 154 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 213
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 214 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 270
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 380
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 271 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEV 320
Query: 381 PLGILEVEEHSDKV 394
+ +++ H+D V
Sbjct: 321 ---VQKLQGHTDTV 331
Score = 120 (47.3 bits), Expect = 0.00088, P = 0.00088
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 449 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K+ ++ VAW + R +++ + + +K+W+ G ++ LKGH+N VF +P S ++
Sbjct: 114 KLGISDVAWSSDSRLLVSGSD-DKTLKVWELSTGKSLKTLKGHSNYVFCCNFNP-QSNLI 171
Query: 509 LSAGHDGLIIIWDILSSK 526
+S D + IWD+ + K
Sbjct: 172 VSGSFDESVRIWDVRTGK 189
Score = 110 (43.8 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 197 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 243
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 506
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 244 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 299
Query: 507 VLLSAGHDGLIIIWDILSSKQ 527
++S D ++ IW+ L SK+
Sbjct: 300 WIVSGSEDNMVYIWN-LQSKE 319
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 176 (67.0 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 76
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 77 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 132
Query: 322 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 354
K + H +PV R G+ I+ SS+
Sbjct: 133 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 165
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 101 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 160
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 161 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 217
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 380
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 218 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 267
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 422
+ +++ H+D V S + S + D T +W C
Sbjct: 268 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 308
Score = 127 (49.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 449 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K+ ++ VAW + +++A + + +KIWD +G ++ LKGH+N VF +P S ++
Sbjct: 61 KLGISDVAWSSDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 118
Query: 509 LSAGHDGLIIIWDILSSK 526
+S D + IWD+ + K
Sbjct: 119 VSGSFDESVRIWDVKTGK 136
Score = 109 (43.4 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 144 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 190
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 506
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 191 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 246
Query: 507 VLLSAGHDGLIIIWDILSSKQ 527
++S D L+ IW+ L +K+
Sbjct: 247 WIVSGSEDNLVYIWN-LQTKE 266
Score = 91 (37.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 117 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 175
Query: 524 SSK 526
S +
Sbjct: 176 SGQ 178
Score = 88 (36.0 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 70
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 360
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 71 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 117
Query: 361 LATGSGDHHVRVY 373
+ +GS D VR++
Sbjct: 118 IVSGSFDESVRIW 130
Score = 87 (35.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 153 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 210
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W Y + CL K + N+K + +W+++ N
Sbjct: 211 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 256
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 520
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 257 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 304
Score = 37 (18.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
H+ V S+++S + S S D IW
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIW 46
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 176 (67.0 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 322 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 354
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 380
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 422
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 127 (49.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 449 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K+ ++ VAW + +++A + + +KIWD +G ++ LKGH+N VF +P S ++
Sbjct: 87 KLGISDVAWSSDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 509 LSAGHDGLIIIWDILSSK 526
+S D + IWD+ + K
Sbjct: 145 VSGSFDESVRIWDVKTGK 162
Score = 109 (43.4 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 506
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 507 VLLSAGHDGLIIIWDILSSKQ 527
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 524 SSK 526
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 360
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 361 LATGSGDHHVRVY 373
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 520
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
Score = 37 (18.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
H+ V S+++S + S S D IW
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 176 (67.0 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 322 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 354
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 380
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 422
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 127 (49.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 449 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K+ ++ VAW + +++A + + +KIWD +G ++ LKGH+N VF +P S ++
Sbjct: 87 KLGISDVAWSSDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 509 LSAGHDGLIIIWDILSSK 526
+S D + IWD+ + K
Sbjct: 145 VSGSFDESVRIWDVKTGK 162
Score = 109 (43.4 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 506
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 507 VLLSAGHDGLIIIWDILSSKQ 527
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 524 SSK 526
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 360
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 361 LATGSGDHHVRVY 373
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 520
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
Score = 37 (18.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
H+ V S+++S + S S D IW
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 176 (67.0 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 322 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 354
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 380
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 422
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 127 (49.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 449 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K+ ++ VAW + +++A + + +KIWD +G ++ LKGH+N VF +P S ++
Sbjct: 87 KLGISDVAWSSDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 509 LSAGHDGLIIIWDILSSK 526
+S D + IWD+ + K
Sbjct: 145 VSGSFDESVRIWDVKTGK 162
Score = 109 (43.4 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 506
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 507 VLLSAGHDGLIIIWDILSSKQ 527
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 524 SSK 526
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 360
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 361 LATGSGDHHVRVY 373
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 520
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
Score = 37 (18.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
H+ V S+++S + S S D IW
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 176 (67.0 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 322 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 354
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 380
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 422
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 127 (49.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 449 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K+ ++ VAW + +++A + + +KIWD +G ++ LKGH+N VF +P S ++
Sbjct: 87 KLGISDVAWSSDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 509 LSAGHDGLIIIWDILSSK 526
+S D + IWD+ + K
Sbjct: 145 VSGSFDESVRIWDVKTGK 162
Score = 109 (43.4 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 506
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 507 VLLSAGHDGLIIIWDILSSKQ 527
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 524 SSK 526
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 360
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 361 LATGSGDHHVRVY 373
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 520
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
Score = 37 (18.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
H+ V S+++S + S S D IW
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 176 (67.0 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 322 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 354
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 380
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 422
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 127 (49.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 449 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K+ ++ VAW + +++A + + +KIWD +G ++ LKGH+N VF +P S ++
Sbjct: 87 KLGISDVAWSSDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 509 LSAGHDGLIIIWDILSSK 526
+S D + IWD+ + K
Sbjct: 145 VSGSFDESVRIWDVKTGK 162
Score = 109 (43.4 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 506
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 507 VLLSAGHDGLIIIWDILSSKQ 527
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 524 SSK 526
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 360
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 361 LATGSGDHHVRVY 373
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 520
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
Score = 37 (18.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
H+ V S+++S + S S D IW
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 168 (64.2 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 195 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
R+ + +GH + + LF +I+TG+ D LW A GK +ATL G EI D
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCF 311
Query: 255 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 314
D L+A + D T R++N T I+ L GH+G I+ ++F P G N L + S+D
Sbjct: 312 DYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNP---QG-NRLLTGSSDK 367
Query: 315 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W + + H +F+ C+ F+ G + TGS D+ R+++
Sbjct: 368 TARIWDVQTGQCLQVLEGHTDEIFS-----------CA-FNYKGNIVITGSKDNSCRIWR 415
Score = 157 (60.3 bits), Expect = 6.2e-16, Sum P(3) = 6.2e-16
Identities = 35/119 (29%), Positives = 65/119 (54%)
Query: 202 GHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH + V+ + F+ G+ I TG+ D KLW A GK T RG + EI ++ + ++ +
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTV 191
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+A G++D T ++W++Q+ + L GH I ++F + +G + + + S D + W
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSF---DTSG-DRIITGSFDHTVVVW 246
Score = 149 (57.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 49/175 (28%), Positives = 72/175 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + C+ F+ V+ TG+ D KLW + G+ + TL G EI ++ D +
Sbjct: 175 GHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI 234
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF---CPLEVNGFNYLASTSTDGCIGF 318
G+ D T+ +W+ T + L+GH I+ F C L + G S D
Sbjct: 235 ITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTG-------SMDKTCML 287
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
W D K V + + IL S F G +AT S D RVY
Sbjct: 288 W----DATSGKCV--------ATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
Score = 87 (35.7 bits), Expect = 6.2e-16, Sum P(3) = 6.2e-16
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
IL S F G +AT S D RVY + I ++E H ++ I ++ R ++
Sbjct: 306 ILDSCFDYTGKLIATASADGTARVYN---ATTRKCITKLEGHEGEISKISFNPQGNRLLT 362
Query: 409 GSRDGTALIWYYKCSQ 424
GS D TA IW + Q
Sbjct: 363 GSSDKTARIWDVQTGQ 378
Score = 84 (34.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
SF+P G L TGS D R++ + L +LE H+D++ S +++ ++GS+D
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDVQ-TGQCLQVLE--GHTDEIFSCAFNYKGNIVITGSKD 408
Query: 413 GTALIW 418
+ IW
Sbjct: 409 NSCRIW 414
Score = 83 (34.3 bits), Expect = 6.2e-16, Sum P(3) = 6.2e-16
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 475 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
+IWD G +QVL+GHT+E+F + + ++++ D IW
Sbjct: 370 RIWDVQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNSCRIW 414
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 177 (67.4 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
Y GHL ++ V F G+ + + + D IK+W A DGK TL G ISDIA
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQD 99
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+ L+ + + DKTI+IW++++ + L GH+ + GV+F P N + S S D +
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQS----NLIVSGSFDENVR 155
Query: 318 FW 319
W
Sbjct: 156 IW 157
Score = 158 (60.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 41/172 (23%), Positives = 82/172 (47%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + + + ++I + +DD IK+W GK++ TL+G + ++ + ++ L+
Sbjct: 86 GHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI 145
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G+ D+ +RIW++ T ++ H +TGV+F +G + S S DG + W
Sbjct: 146 VSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHF---NRDG-TLVVSGSYDGTVRIW-- 199
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
D + + N + FSP G F+ G+ D+ +R++
Sbjct: 200 --DTTTGQ-------LLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Score = 119 (46.9 bits), Expect = 0.00099, P = 0.00099
Identities = 47/181 (25%), Positives = 81/181 (44%)
Query: 184 LMISSHKYSNLRQHYVNLG--------HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD 235
L++S N+R VN G H V V F++ G ++V+G+ D +++W
Sbjct: 144 LIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTT 203
Query: 236 GKLLATLRGCSG-EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAP-ISVLVGHQGIITG 293
G+LL T+ G E+S + + AGT+D T+R+W+ + GH+
Sbjct: 204 GQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYC 263
Query: 294 VNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI-DISKTVF-HEPVMFNERIRPGNAHILC 351
+ F V ++ + S D I + Y L +I +T+ HE V+ P +I+
Sbjct: 264 I-FSTFSVTCGKWIVTGSEDNLI--YIYNLQTREIVQTLAGHEDVVLTVACHP-TENIIA 319
Query: 352 S 352
S
Sbjct: 320 S 320
Score = 100 (40.3 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 38/168 (22%), Positives = 72/168 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
F+ G + +GS D VR++ L + E+ + V +++S + ++G+ D
Sbjct: 180 FNRDGTLVVSGSYDGTVRIWDTT-TGQLLNTISTEDGKE-VSFVKFSPNGKFVLAGTLDN 237
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W Y ++ CL K + N+K + +W++T N
Sbjct: 238 TLRLWSYNNNK---------KCL---KTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNL- 284
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA-GHDGLIIIW 520
I I++ ++VQ L GH + V + HP ++ + A D + IW
Sbjct: 285 IYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 58 (25.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 24/104 (23%), Positives = 51/104 (49%)
Query: 428 IRL-DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL 484
+R+ D+NT C TK S ++ VT V ++ V++ +++ ++IWD G L
Sbjct: 154 VRIWDVNTGEC---TKMISAHSDP---VTGVHFNRDGTLVVSG-SYDGTVRIWDTTTGQL 206
Query: 485 VQVLKGHTN-EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
+ + EV ++ P + + +L+ D + +W ++K+
Sbjct: 207 LNTISTEDGKEVSFVKFSP-NGKFVLAGTLDNTLRLWSYNNNKK 249
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 176 (67.0 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 322 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 354
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 380
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTCHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEV 293
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 422
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 127 (49.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 449 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K+ ++ VAW + +++A + + +KIWD +G ++ LKGH+N VF +P S ++
Sbjct: 87 KLGISDVAWSSDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 509 LSAGHDGLIIIWDILSSK 526
+S D + IWD+ + K
Sbjct: 145 VSGSFDESVRIWDVKTGK 162
Score = 100 (40.3 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 36/141 (25%), Positives = 63/141 (44%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 506
V+ V + + ++++ A N +K+WD G ++ H NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTCHKNEKYCIFAN-FSVTGGK 272
Query: 507 VLLSAGHDGLIIIWDILSSKQ 527
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 524 SSK 526
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 360
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 361 LATGSGDHHVRVY 373
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 85 (35.0 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 36/169 (21%), Positives = 75/169 (44%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W Y S+ + ++ TC H N+K + +W+++ N
Sbjct: 237 TLKLWDY--SKGKCLKT--YTC--HK-------NEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 520
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEVVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
Score = 37 (18.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
H+ V S+++S + S S D IW
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/180 (29%), Positives = 87/180 (48%)
Query: 195 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
R+ + +GH + + F+ +I+TG+ D KLW A +GK +ATL G EI D
Sbjct: 252 RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCF 311
Query: 255 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 314
D L+A + D T RI++ T I+ L GH+G I+ ++F P G N+L + S+D
Sbjct: 312 DYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNP---QG-NHLLTGSSDK 367
Query: 315 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W + + H +F+ C+ F+ G + TGS D+ R+++
Sbjct: 368 TARIWDAQTGQCLQVLEGHTDEIFS-----------CA-FNYKGNIVITGSKDNTCRIWR 415
Score = 157 (60.3 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 31/105 (29%), Positives = 57/105 (54%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + C+ F+ ++ TG+ D KLW ++G+ + TLRG S EI ++ + +
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRI 234
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF---CPLEVNG 303
G+ D T+ +W+ T +++L+GH I+ +F C L + G
Sbjct: 235 ITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTG 279
Score = 153 (58.9 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 202 GHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH + V+ + F+ G+ I TG+ D KLW GK T RG + EI ++ + ++ L
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTL 191
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+A G++D T ++W++Q + L GH I ++F
Sbjct: 192 VATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
Score = 151 (58.2 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 51/175 (29%), Positives = 78/175 (44%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR-NILL 261
H+ + V +K G +TG+ D KLW G+ L TL G + IA +N +
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI 150
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A G+ DKT ++W+++T GH I ++F P +A+ S D W
Sbjct: 151 ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST----LVATGSMDTTAKLW-- 204
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
DI + V+ +R +A I+ SF+ G + TGS DH V V+ D
Sbjct: 205 --DIQNGEEVY--------TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
Score = 147 (56.8 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 49/181 (27%), Positives = 81/181 (44%)
Query: 193 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 252
N + Y GH + + + F+ G+ I+TG+ D + +W A G+ + L G EIS
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSA 267
Query: 253 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 312
+ + L+ G++DKT ++W+ ++ L GH I ++ C + G +A+ S
Sbjct: 268 SFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEI--LDSC-FDYTG-KLIATASA 323
Query: 313 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
DG + I+K HE I SF+P G L TGS D R+
Sbjct: 324 DGTARIFSAATRKCIAKLEGHE------------GEISKISFNPQGNHLLTGSSDKTARI 371
Query: 373 Y 373
+
Sbjct: 372 W 372
Score = 97 (39.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 343 RPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS 402
R A I+C SF+P +ATGS D +++ + + + + HS ++ S+ ++ S
Sbjct: 174 RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEE---VYTLRGHSAEIISLSFNTS 230
Query: 403 HLRFVSGSRDGTALIW 418
R ++GS D T ++W
Sbjct: 231 GDRIITGSFDHTVVVW 246
Score = 90 (36.7 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLG-ILEV-EEHSDKVDSIQWSHSHLRFVSGS 410
SF+P G L TGS D R++ D+ G L+V E H+D++ S +++ ++GS
Sbjct: 352 SFNPQGNHLLTGSSDKTARIW-----DAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGS 406
Query: 411 RDGTALIW 418
+D T IW
Sbjct: 407 KDNTCRIW 414
Score = 88 (36.0 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 475 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
+IWDA G +QVL+GHT+E+F + + ++++ D IW
Sbjct: 370 RIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNTCRIW 414
Score = 84 (34.6 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 451 KVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLS 510
++ ++++ S +IT +F+ + +WDA G V +L GH E+ S +D ++L+
Sbjct: 221 EIISLSFNTSGDRIITG-SFDHTVVVWDADTGRKVNILIGHCAEISSA-SFNWDCSLILT 278
Query: 511 AGHDGLIIIWDILSSK 526
D +WD + K
Sbjct: 279 GSMDKTCKLWDATNGK 294
Score = 82 (33.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 457 WDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES-HPFDSRVLLSAGHDG 515
WD S ++T + + K+WDA NG V L GH +E+ L+S + +++ +A DG
Sbjct: 271 WDCS--LILTG-SMDKTCKLWDATNGKCVATLTGHDDEI--LDSCFDYTGKLIATASADG 325
Query: 516 LIIIWDILSSK 526
I+ + K
Sbjct: 326 TARIFSAATRK 336
Score = 75 (31.5 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
IL S F G +AT S D R++ + I ++E H ++ I ++ ++
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFS---AATRKCIAKLEGHEGEISKISFNPQGNHLLT 362
Query: 409 GSRDGTALIW 418
GS D TA IW
Sbjct: 363 GSSDKTARIW 372
Score = 73 (30.8 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 342 IRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH 401
+R +A I+ SF+ G + TGS DH V V+ D + IL H ++ S ++
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD-TGRKVNILI--GHCAEISSASFNW 271
Query: 402 SHLRFVSGSRDGTALIW 418
++GS D T +W
Sbjct: 272 DCSLILTGSMDKTCKLW 288
Score = 46 (21.3 bits), Expect = 8.0e-12, Sum P(3) = 8.0e-12
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 347 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 406
A I +SF+ + TGS D +++ D + + + H D++ + ++
Sbjct: 262 AEISSASFNWDCSLILTGSMDKTCKLW--DATNGKC-VATLTGHDDEILDSCFDYTGKLI 318
Query: 407 VSGSRDGTALIW 418
+ S DGTA I+
Sbjct: 319 ATASADGTARIF 330
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 140 (54.3 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 36/119 (30%), Positives = 55/119 (46%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH SAV+ + F+ G +I +G+ D I LWR D K L+G I D+ +
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+ + + DKT+R W+++T I + H + CP G + S S DG W
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC--CPTR-RGPPLIISGSDDGTAKLW 166
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 39/156 (25%), Positives = 71/156 (45%)
Query: 218 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 277
+I++G+DD KLW R + T +I+ ++ + + G VD +++W+L+
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLRK 211
Query: 278 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 337
L GHQ ITG++ P +G +YL + D + W + ++ V +
Sbjct: 212 GEATMTLEGHQDTITGMSLSP---DG-SYLLTNGMDNKLCVWDMRPYAPQNRCV----KI 263
Query: 338 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
F ++L S+SP G + GS D V ++
Sbjct: 264 FEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIW 299
Score = 127 (49.8 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 449 KIKVTMVAW-DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 507
K ++T V++ DA+D+ + T + +K+WD G+ L+GH + + + P D
Sbjct: 180 KYQITAVSFSDAADK-IFTG-GVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSP-DGSY 236
Query: 508 LLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT--TCALTDSY 563
LL+ G D + +WD+ + + R K F + E L WSPDGT T +D
Sbjct: 237 LLTNGMDNKLCVWDMRPYAPQNRCVKIFEGH-QHNFEKNLLKCSWSPDGTKVTAGSSDRM 295
Query: 564 GHL 566
H+
Sbjct: 296 VHI 298
Score = 82 (33.9 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 37/179 (20%), Positives = 70/179 (39%)
Query: 344 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 403
P I SFS + TG D+ V+V+ + ++ + + E H D + + S
Sbjct: 178 PDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL---EGHQDTITGMSLSPDG 234
Query: 404 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 463
++ D +W + N C+ + + N + + +W + D
Sbjct: 235 SYLLTNGMDNKLCVWDMRPYA------PQNRCVKIFE--GHQHNFEKNLLKCSW-SPDGT 285
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+TA + + + IWD + + L GHT V HP + ++ S D I + +I
Sbjct: 286 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEP-IIGSCSSDKNIYLGEI 343
Score = 79 (32.9 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 191 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS 250
+ + + V GH +A+ + + G IV+ + D ++ W GK + + S ++
Sbjct: 83 HGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVN 142
Query: 251 DIAIDNRNI-LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
R L+ +G+ D T ++W+++ I I T V+F
Sbjct: 143 SCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQI-TAVSF 188
Score = 60 (26.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 21/93 (22%), Positives = 39/93 (41%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 300
L G + + + L+A+G+ D+ I +W + VL GH+ I +++
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTS-- 106
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH 333
+G + + S S D + W + I K H
Sbjct: 107 -DG-SQIVSASPDKTVRAWDVETGKQIKKMAEH 137
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/89 (21%), Positives = 39/89 (43%)
Query: 374 KMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW--YYKCSQWRFIRLD 431
+ +++P+ +L H V +++++ + SGS D +W + C + ++
Sbjct: 38 RTSSLEAPIMLLS--GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGH 95
Query: 432 MNTCLP-H-TKETSDETNKKIKVTMVAWD 458
N L H T + S + T+ AWD
Sbjct: 96 KNAILDLHWTSDGSQIVSASPDKTVRAWD 124
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
API +L GH + + F P G +AS S D I W+
Sbjct: 44 APIMLLSGHPSAVYTMKFNPA---G-TLIASGSHDREIFLWR 81
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 166 (63.5 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH +A+ V F GE + + A D LI +W A DG TL G S EISD+A + + L
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRL 96
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT+++W++++ + L GH + +F P N + S S D + W+
Sbjct: 97 VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPS----NLIVSGSFDESVKIWEV 152
Query: 322 K 322
K
Sbjct: 153 K 153
Score = 150 (57.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 45/172 (26%), Positives = 80/172 (46%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V + +V+ +DD +K+W R GK L TL+G S + + + L+
Sbjct: 79 GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLI 138
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G+ D++++IW ++T + L H I+ VNF NG + + S S DG W
Sbjct: 139 VSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNF---NCNG-SLIVSGSYDGLCRIWDA 194
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+T+ E GN + FSP G ++ T + D+ ++++
Sbjct: 195 ASG-QCLRTLADE----------GNPPVSFVKFSPNGKYILTATLDNTLKLW 235
Score = 149 (57.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+ C F+P + +GS D V++++ V + + + HSD + ++ ++ + VS
Sbjct: 126 VFCCDFNPPSNLIVSGSFDESVKIWE---VKTGKCLKTLSAHSDPISAVNFNCNGSLIVS 182
Query: 409 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 468
GS DG IW Q CL + +DE N V+ V + + ++++TA
Sbjct: 183 GSYDGLCRIWDAASGQ----------CL---RTLADEGNPP--VSFVKFSPNGKYILTAT 227
Query: 469 NFNFQIKIWDAFNGDLVQVLKGHTNEVFVL-ESHPFDSRV-LLSAGHDGLIIIWDILSSK 526
N +K+WD G ++ GH NE + L S R ++S D ++ IW+ L +K
Sbjct: 228 LDN-TLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWN-LQTK 285
Query: 527 Q 527
+
Sbjct: 286 E 286
Score = 119 (46.9 bits), Expect = 0.00095, P = 0.00095
Identities = 34/152 (22%), Positives = 64/152 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGE-ISDIAIDNRNILL 261
H + V F+ G +IV+G+ D L ++W A G+ L TL +S + +
Sbjct: 164 HSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYI 223
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
T+D T+++W+ + GH+ + F V G ++ S S D + W
Sbjct: 224 LTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCL-FASFSVTGRKWVVSGSEDNMVYIWNL 282
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSS 353
+ + + H V+ + P +I+ S+
Sbjct: 283 QTKEIVQRLQGHTDVVISAACHP-TKNIIASA 313
Score = 97 (39.2 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 41/171 (23%), Positives = 76/171 (44%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+F+ G + +GS D R++ D +E + V +++S + ++ + D
Sbjct: 172 NFNCNGSLIVSGSYDGLCRIW--DAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLD 229
Query: 413 GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR-WVITAINFN 471
T +W Y S+ R CL K + N+K + ++ + R WV++ N
Sbjct: 230 NTLKLWDY--SRGR--------CL---KTYTGHKNEKYCL-FASFSVTGRKWVVSGSEDN 275
Query: 472 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 520
+ IW+ ++VQ L+GHT+ V HP ++ SA +D I +W
Sbjct: 276 M-VYIWNLQTKEIVQRLQGHTDVVISAACHP-TKNIIASAALENDKTIKVW 324
Score = 70 (29.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 32/138 (23%), Positives = 54/138 (39%)
Query: 238 LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFC 297
L TL G S IS + LA+ D I IW L GH I+ V +
Sbjct: 31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWS 90
Query: 298 PLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG 357
+ + L S S D + W D+ K + + ++ + + C F+P
Sbjct: 91 ----SDSSRLVSASDDKTLKVW----DMRSGKCL--------KTLKGHSDFVFCCDFNPP 134
Query: 358 GLFLATGSGDHHVRVYKM 375
+ +GS D V+++++
Sbjct: 135 SNLIVSGSFDESVKIWEV 152
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 202 (76.2 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 88/343 (25%), Positives = 158/343 (46%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V + F G+++ +G+ D I LW + G+LL T G I +A L
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKEL 849
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+ + D TI+IW+L T L H + V F P +G LAS+S D I W
Sbjct: 850 ASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP---DG-KLLASSSLDSTIKVWNP 905
Query: 322 ---KLDIDIS-KTVFHEPVMFN---ERIRPGNAHILCSSFSPG-GLFLATGSG-DHHVR- 371
+L + ++ + + V F+ +++ G+ ++P G L T G VR
Sbjct: 906 ATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRS 965
Query: 372 -VYKMDG--VDSPLGILEVEEHSDKVDSIQWSHS-H---LRFVSGSRDGTALIWYYKCSQ 424
+ DG + S ++ + +Q + H +R V+ S DG L+ S
Sbjct: 966 VAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLV---SGSD 1022
Query: 425 WRFIRL-DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD 483
I+L D+ T +++ ++ ++ + VA+ D+ + ++ + + IK+WD+ G+
Sbjct: 1023 DNTIKLWDLATS--ELQQSLEDHSRSVHA--VAFSPDDKQLASS-SLDSTIKLWDSATGE 1077
Query: 484 LVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 526
L + L+GH+ V + P D ++L S +DG I +W+ L+ +
Sbjct: 1078 LQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGTIKLWNPLTGE 1119
Score = 175 (66.7 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 54/171 (31%), Positives = 82/171 (47%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 262
HL V V+F G+ +V+G+ D +K+W G+LL TL G SG + +A LLA
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLA 808
Query: 263 AGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 322
+G+ D TI +W+ T + GH I V F P +G LAS S D I W
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP---DG-KELASASDDSTIKIWDLA 864
Query: 323 LDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
++ +T+ ++ +R +FSP G LA+ S D ++V+
Sbjct: 865 TG-ELQQTLDSH----SQSVRS-------VAFSPDGKLLASSSLDSTIKVW 903
Score = 145 (56.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 51/180 (28%), Positives = 76/180 (42%)
Query: 140 SGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYV 199
+G L R+L H + SV +L S Y G + + ++ L
Sbjct: 1075 TGELQRTL--EGHSQGV---RSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLT---- 1125
Query: 200 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
G V V F G+ + +G D IKLW + G+LL TL G S I +
Sbjct: 1126 --GRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGK 1183
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LLA+G+ D+T ++W+ T + + GH + V F P +G LAS+S I W
Sbjct: 1184 LLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP---DG-KLLASSSYGETIKLW 1239
Score = 138 (53.6 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 56/207 (27%), Positives = 88/207 (42%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V V F G+++ + + D IKLW G+L TL G S + +A L
Sbjct: 1084 GHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQL 1143
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G D TI++W+ T + L GH I V F P +G LAS S D W
Sbjct: 1144 ASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP---DG-KLLASGSYDQTAKLWDP 1199
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP 381
++ + +F + E + +FSP G LA+ S ++++ D V
Sbjct: 1200 ATG-ELLQ-IFEGHSKWVESV----------AFSPDGKLLASSSYGETIKLW--DPVTGE 1245
Query: 382 LGILEVEEHSDKVDSIQWSHSHLRFVS 408
L + + + + S+ +S R S
Sbjct: 1246 L-LQTLNDPDESAGSVAFSPDGNRLAS 1271
Score = 126 (49.4 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 48/171 (28%), Positives = 76/171 (44%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 262
H +V V F + + + + D IKLW + G+L TL G S + + LLA
Sbjct: 1043 HSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLA 1102
Query: 263 AGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 322
+ + D TI++WN T L G + V F P +G LAS D I W
Sbjct: 1103 SNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP---DG-KQLASGYYDSTIKLWDSA 1158
Query: 323 LDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
++ +T+ ++RI+ ++ FSP G LA+GS D +++
Sbjct: 1159 TG-ELLQTLEGH----SDRIQS----VV---FSPDGKLLASGSYDQTAKLW 1197
Score = 106 (42.4 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 437 PHTKETSDE-TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 495
P T E T + V VA+ + + + ++ IK+WD+ G+L+Q L+GH++ +
Sbjct: 1115 PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGY-YDSTIKLWDSATGELLQTLEGHSDRI 1173
Query: 496 FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT 555
+ P D ++L S +D +WD + + I EG + + +SPDG
Sbjct: 1174 QSVVFSP-DGKLLASGSYDQTAKLWDPATGE------LLQIFEGHSKW-VESVAFSPDGK 1225
Query: 556 TCALTDSYGHLL 567
A + SYG +
Sbjct: 1226 LLA-SSSYGETI 1236
Score = 93 (37.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 34/135 (25%), Positives = 56/135 (41%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G + + L +G+ D T++IW+ T + L GH G + + F P
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSP-- 802
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 360
+G LAS S D I W ++ +T P I +F+P G
Sbjct: 803 -DG-KLLASGSYDNTIDLWDSATG-ELLQTFEGHP-----------HSIWSVAFAPDGKE 848
Query: 361 LATGSGDHHVRVYKM 375
LA+ S D ++++ +
Sbjct: 849 LASASDDSTIKIWDL 863
Score = 91 (37.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 26/103 (25%), Positives = 52/103 (50%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
D ++ + +++ K+WD G+L+Q+ +GH+ V + P D ++L S+ + I +W
Sbjct: 1181 DGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP-DGKLLASSSYGETIKLW 1239
Query: 521 DILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY 563
D ++ + + ++ E G A +SPDG A D +
Sbjct: 1240 DPVTGEL--LQTLNDPDESAGSVA-----FSPDGNRLASVDIF 1275
Score = 80 (33.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
D ++ + +++ IK+W+ G+L Q L G ++ V + P D + L S +D I +W
Sbjct: 1097 DGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP-DGKQLASGYYDSTIKLW 1155
Query: 521 DILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY 563
D + + +EG + + +SPDG A + SY
Sbjct: 1156 DSATGE------LLQTLEGHSD-RIQSVVFSPDGKLLA-SGSY 1190
Score = 78 (32.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
FSP G L +GS D V+++ D L + ++ HS V+S+ +S SGS D
Sbjct: 758 FSPDGKQLVSGSYDDTVKIW--DPATGEL-LQTLDGHSGTVESLAFSPDGKLLASGSYDN 814
Query: 414 TALIW 418
T +W
Sbjct: 815 TIDLW 819
Score = 72 (30.4 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 472 FQIKIWDAFNGDLVQVLKGHTNEVF 496
F KIWD G+L+Q LKGH+ V+
Sbjct: 1275 FDTKIWDPATGELLQALKGHSKWVW 1299
Score = 68 (29.0 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLG-ILEV-EEHSDKVDSIQWSHSHLRFVSGSR 411
FSP G LA+GS D +++ D G +L++ E HS V+S+ +S S S
Sbjct: 1178 FSPDGKLLASGSYDQTAKLW-----DPATGELLQIFEGHSKWVESVAFSPDGKLLASSSY 1232
Query: 412 DGTALIW 418
T +W
Sbjct: 1233 GETIKLW 1239
Score = 53 (23.7 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
V VA+ + D ++ + ++ IK+WD G+L+Q L
Sbjct: 1215 VESVAF-SPDGKLLASSSYGETIKLWDPVTGELLQTL 1250
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 218 (81.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 63/221 (28%), Positives = 107/221 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH ++ + F K G+ +V+G+ D + LW G+ L G ++ + +
Sbjct: 386 GHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG-VTTVMFSPDGQFI 444
Query: 262 AAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
AAG++DK IRIW TL + L GH+ + V F P +G YL S S D I W+
Sbjct: 445 AAGSLDKVIRIWTSSGTL--VEQLHGHEESVYSVAFSP---DG-KYLVSGSLDNTIKLWE 498
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ +++ +++ E + + IL + SP G ++ +GS D ++ + D S
Sbjct: 499 LQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPD---S 555
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 421
P L ++ H++ V S+ S + F +GS D A IW Y+
Sbjct: 556 PHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 596
Score = 113 (44.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 40/149 (26%), Positives = 63/149 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
FSP G F+A GS D +R++ G L + ++ H + V S+ +S VSGS D
Sbjct: 437 FSPDGQFIAAGSLDKVIRIWTSSGT---L-VEQLHGHEESVYSVAFSPDGKYLVSGSLDN 492
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W +C + M K+T T K + V +W+I+ +
Sbjct: 493 TIKLWELQCVS--NVAPSMYKEGGICKQTF--TGHKDFILSVTVSPDGKWIISGSK-DRT 547
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHP 502
I+ W + L+GH N V + P
Sbjct: 548 IQFWSPDSPHSQLTLQGHNNSVISVAVSP 576
Score = 99 (39.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 343 RPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS 402
R G+ ++ +FSP G +LATG D +R++ D + L + H ++ S+ +S
Sbjct: 343 REGDLYVRSVAFSPDGKYLATGVEDQQIRIW--DIAQKRVYRL-LTGHEQEIYSLDFSKD 399
Query: 403 HLRFVSGSRDGTALIWYYKCSQWRFI 428
VSGS D T +W + + + I
Sbjct: 400 GKTLVSGSGDRTVCLWDVEAGEQKLI 425
Score = 94 (38.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 46/198 (23%), Positives = 80/198 (40%)
Query: 142 PLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNL 201
P++ L+++ K S P ++ T NV E ++ + S H L
Sbjct: 240 PIAAPLVVNG-KVSGNPPYPAEIIPTSNVPNREEKDWTVTSNVPNKEPPISVQLLH--TL 296
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGE------ISDIAID 255
H S + V F G+ + TG + + ++ GKL+ L+ S + + +A
Sbjct: 297 EHTSVICYVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLYVRSVAFS 355
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
LA G D+ IRIW++ +L GH+ I ++F +G L S S D
Sbjct: 356 PDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSK---DG-KTLVSGSGDRT 411
Query: 316 IGFWKYKLDIDISKTVFH 333
+ W ++ K + H
Sbjct: 412 VCLWD--VEAGEQKLILH 427
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
VT V + + D I A + + I+IW + +G LV+ L GH V+ + P D + L+S
Sbjct: 432 VTTVMF-SPDGQFIAAGSLDKVIRIWTS-SGTLVEQLHGHEESVYSVAFSP-DGKYLVSG 488
Query: 512 GHDGLIIIWDI 522
D I +W++
Sbjct: 489 SLDNTIKLWEL 499
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 153 (58.9 bits), Expect = 6.6e-14, Sum P(3) = 6.6e-14
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 204 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAA 263
L +V+CV +D E++V+G+ D + +W +L L G SG + + R LL +
Sbjct: 221 LDSVYCVQYDD--EIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVS 278
Query: 264 GTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
G+ D TI IW+ Q P+ V GH + GV V NY+ S+S D W+
Sbjct: 279 GSSDSTIIIWDWQNRRPLKVYFGHTDNVLGV------VVSENYIISSSRDHTARVWR 329
Score = 114 (45.2 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 43/181 (23%), Positives = 83/181 (45%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
Y GH +V C+ F + ++V+G+ D I +W ++ + L G + + + + +
Sbjct: 255 YKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVV-SE 313
Query: 258 NILLAAGTVDKTIRIWNLQTLAP----ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 313
N ++++ D T R+W L +P + VL GH + V + G + + S+D
Sbjct: 314 NYIISSSR-DHTARVWRLDATSPAEACMHVLRGHLASVNSVQYS--SKTGL--IVTASSD 368
Query: 314 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+ W DI T H + + R G I C+ ++ G F+ +GS D +R++
Sbjct: 369 RTLRTW----DI----TTGHCIRIIHAHQR-G---IACAQYN--GKFIVSGSSDLTIRIF 414
Query: 374 K 374
+
Sbjct: 415 E 415
Score = 88 (36.0 bits), Expect = 6.6e-14, Sum P(3) = 6.6e-14
Identities = 21/74 (28%), Positives = 42/74 (56%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 533
I+I++A +G L+++L+GH + ++ + F+ ++S G+DG + IW+ + +Q
Sbjct: 411 IRIFEASSGKLLRMLQGHED---LIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQHCV--L 465
Query: 534 HNIVEGQGEGALFD 547
HN + G FD
Sbjct: 466 HNSRNSRVFGLQFD 479
Score = 87 (35.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 30/127 (23%), Positives = 58/127 (45%)
Query: 191 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR----ARDGKLLATLRGCS 246
+ N R V GH V V+ + I++ + D ++WR + + LRG
Sbjct: 290 WQNRRPLKVYFGHTDNVLGVVVSE--NYIISSSRDHTARVWRLDATSPAEACMHVLRGHL 347
Query: 247 GEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ + ++ L+ + D+T+R W++ T I ++ HQ G+ C + NG +
Sbjct: 348 ASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQ---RGIA-CA-QYNG-KF 401
Query: 307 LASTSTD 313
+ S S+D
Sbjct: 402 IVSGSSD 408
Score = 83 (34.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 342 IRPGNAH---ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQ 398
IR +AH I C+ ++ G F+ +GS D +R+++ L +L+ H D + +++
Sbjct: 382 IRIIHAHQRGIACAQYN--GKFIVSGSSDLTIRIFEASS-GKLLRMLQ--GHEDLIRTVR 436
Query: 399 WSHSHLRFVSGSRDGTALIWYYKCSQ 424
++ + VSG DGT IW + +
Sbjct: 437 FNDE--KIVSGGYDGTVRIWNFNTGE 460
Score = 71 (30.1 bits), Expect = 6.6e-14, Sum P(3) = 6.6e-14
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 360 FLATGSGDHHVRVYKMDGVDSPLGILEV-EEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
++ + S DH RV+++D + V H V+S+Q+S V+ S D T W
Sbjct: 315 YIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTW 374
Score = 62 (26.9 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 460 SDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNE-VFVLESHPFDSRVLLSAGHDGLII 518
+D +++ ++ ++IW+ G+ VL N VF L+ FD R +++ H I+
Sbjct: 438 NDEKIVSG-GYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQ---FDHRRIIACTHSSEIL 493
Query: 519 IWD 521
+W+
Sbjct: 494 VWN 496
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 150 (57.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 49/190 (25%), Positives = 85/190 (44%)
Query: 235 DG-KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ----TLAPISVLVGHQG 289
DG ++ L G + + + + LA G D T+R+WNL I V GH
Sbjct: 352 DGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTA 411
Query: 290 IITGVNFCPLEVNGF-NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 348
+T V PL+VNG+ +LAS+S D + ++ L ++K+ F ++ I+ +
Sbjct: 412 SVTAVALGPLDVNGYPTFLASSSQDRTLK--RFNLGSQLNKSDFSNRAVWT--IKAHDRD 467
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+ S G +A+ S D ++++ +G+L H V + ++ + S
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWD-SSTGEVVGVLR--GHRRGVWACSFNPFSRQLAS 524
Query: 409 GSRDGTALIW 418
GS D T IW
Sbjct: 525 GSGDRTIRIW 534
Score = 150 (57.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/207 (26%), Positives = 90/207 (43%)
Query: 171 LRSREYSGPLSRFLM---ISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLL 227
L S L RF + ++ +SN R + H V + K G +I + + D
Sbjct: 430 LASSSQDRTLKRFNLGSQLNKSDFSN-RAVWTIKAHDRDVNAIQVSKDGRIIASASQDKT 488
Query: 228 IKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGH 287
IKLW + G+++ LRG + + + + LA+G+ D+TIRIWN+ T + L GH
Sbjct: 489 IKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGH 548
Query: 288 QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 347
G I + + ++ + S + DG + W ++ HE +R+
Sbjct: 549 TGAILKLIY----ISQGTQVVSAAADGLVKVWSLSSGECVATLDNHE-----DRV----- 594
Query: 348 HILCSSFSPGGLFLATGSGDHHVRVYK 374
L S F G L +G D V V+K
Sbjct: 595 WALASRFD--GSLLVSGGADAVVSVWK 619
Score = 141 (54.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNI-L 260
H + V + D ++ TG + L+K+W + + RG G IS + ++N +
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWV 161
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
LA+G D +R+W+L + ++V GH +I G+ F P G ++L S S D + W
Sbjct: 162 LASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEP---TG-SFLLSGSRDKTVQVWN 217
Query: 321 YKLDIDISKT-VFH 333
K + VFH
Sbjct: 218 IKKRSAVRTIPVFH 231
Score = 130 (50.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV-EEHSDKVDSIQWS----HSH 403
+L S G++LATG+ D+ VR++ ++ D+ + V H+ V ++ + +
Sbjct: 367 VLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGY 426
Query: 404 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 463
F++ S L + SQ + D + T + D I+V+ D
Sbjct: 427 PTFLASSSQDRTLKRFNLGSQLN--KSDFSNRAVWTIKAHDRDVNAIQVS------KDGR 478
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+I + + + IK+WD+ G++V VL+GH V+ +PF SR L S D I IW++
Sbjct: 479 IIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPF-SRQLASGSGDRTIRIWNV 536
Score = 120 (47.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 44/181 (24%), Positives = 74/181 (40%)
Query: 202 GHLSAVFCVLFDKLGE--VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
GH + + F K V+ +GADD ++LW + +A G S I + +
Sbjct: 143 GHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGS 202
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVL-VGHQGIITG-VNFCPLEVNGFNYLASTSTDGCIG 317
L +G+ DKT+++WN++ + + + V H G VN P E Y A
Sbjct: 203 FLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEK--ILYTAGEGNLILAW 260
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG-SGDHHVRVYKMD 376
WK +D H ++ P + + L S S L L G+ + + K++
Sbjct: 261 DWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLLRKRVPGEGFITIKKLN 320
Query: 377 G 377
G
Sbjct: 321 G 321
Score = 109 (43.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 54/232 (23%), Positives = 98/232 (42%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR--DG--KLLATLRGCSGEISDIAIDNR 257
GH V + + G + TGA D ++LW D K + G + ++ +A+
Sbjct: 362 GHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPL 421
Query: 258 NI-----LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIIT------GVNFCPLEVNGFNY 306
++ LA+ + D+T++ +NL + S ++ + T VN + +G
Sbjct: 422 DVNGYPTFLASSSQDRTLKRFNLGSQLNKSDF-SNRAVWTIKAHDRDVNAIQVSKDG-RI 479
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+AS S D I W D + V V+ R + SF+P LA+GSG
Sbjct: 480 IASASQDKTIKLW----DSSTGEVV---GVLRGHR-----RGVWACSFNPFSRQLASGSG 527
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
D +R++ VD+ + +E H+ + + + + VS + DG +W
Sbjct: 528 DRTIRIWN---VDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVW 576
Score = 107 (42.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 35/150 (23%), Positives = 73/150 (48%)
Query: 227 LIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVG 286
L+ ++ G+ + +++ + + ID N LLA G + +++W++ G
Sbjct: 84 LLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRG 143
Query: 287 HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 346
H G+I+ + F + N + LAS + D + W D++ S+++ +F G+
Sbjct: 144 HGGVISALCFGKHQ-NTW-VLASGADDSRVRLW----DLNSSRSM----AVFE-----GH 188
Query: 347 AHILCS-SFSPGGLFLATGSGDHHVRVYKM 375
+ ++ +F P G FL +GS D V+V+ +
Sbjct: 189 SSVIRGLTFEPTGSFLLSGSRDKTVQVWNI 218
Score = 91 (37.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
+K+W +G+ V L H + V+ L S FD +L+S G D ++ +W
Sbjct: 573 VKVWSLSSGECVATLDNHEDRVWALASR-FDGSLLVSGGADAVVSVW 618
Score = 79 (32.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 526
I+IW+ VQ L+GHT + L ++V+ SA DGL+ +W + S +
Sbjct: 531 IRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVV-SAAADGLVKVWSLSSGE 582
Score = 68 (29.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 456 AWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDG 515
AW D + + N F I + + VL+GHT+ V L+S D L + D
Sbjct: 330 AWIGDDHLAVCS-NTEF-IDVISTDGTQVFGVLEGHTDIVLTLDSSE-DGVWLATGAKDN 386
Query: 516 LIIIWDILSSKQRGYKWFH 534
+ +W+ L+ + YK H
Sbjct: 387 TVRLWN-LNIEDNVYKCIH 404
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 149 (57.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 48/212 (22%), Positives = 96/212 (45%)
Query: 202 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 149 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 207
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 263
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 264 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR 317
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ + ++ H+ ++ + + +S S D
Sbjct: 318 RI-LYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 143 (55.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 319
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 320 -KYKLDIDISKTVFHE-PVMFNE 340
+ K I + + V FN+
Sbjct: 181 IRKKAAIQTFQNTYQVLAVTFND 203
Score = 115 (45.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 441 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 500
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 188 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 242
Query: 501 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 243 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 301
Query: 559 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 589
+ D+ ++Y L G N E+ FH D
Sbjct: 302 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 338
Score = 68 (29.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 300
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 118
Query: 301 VNGFNYLASTSTDGCIGFW 319
+G + L S STD + W
Sbjct: 119 TDG-SMLFSASTDKTVAVW 136
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 57 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 100
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 147 (56.8 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 48/212 (22%), Positives = 96/212 (45%)
Query: 202 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 208
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 265 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR 318
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ + ++ H+ ++ + + +S S D
Sbjct: 319 RI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 143 (55.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 319
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 320 -KYKLDIDISKTVFHE-PVMFNE 340
+ K I + + V FN+
Sbjct: 182 IRKKAAIQTFQNTYQVLAVTFND 204
Score = 115 (45.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 441 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 500
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 501 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Query: 559 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 589
+ D+ ++Y L G N E+ FH D
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 339
Score = 73 (30.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 34/176 (19%), Positives = 74/176 (42%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 253
Query: 409 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 466
+ D T +W + + R +++ H E + + +W + D I
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSW-SPDGSKIA 302
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
A + + + +WD + ++ L GH + + HP D ++LSA D + + +I
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP-DEPIILSASSDKRLYMGEI 357
Score = 68 (29.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 300
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 301 VNGFNYLASTSTDGCIGFW 319
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 101
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 147 (56.8 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 48/212 (22%), Positives = 96/212 (45%)
Query: 202 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 208
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 265 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR 318
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ + ++ H+ ++ + + +S S D
Sbjct: 319 RI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 143 (55.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 319
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 320 -KYKLDIDISKTVFHE-PVMFNE 340
+ K I + + V FN+
Sbjct: 182 IRKKAAIQTFQNTYQVLAVTFND 204
Score = 115 (45.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 441 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 500
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 501 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Query: 559 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 589
+ D+ ++Y L G N E+ FH D
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 339
Score = 73 (30.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 34/176 (19%), Positives = 74/176 (42%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 253
Query: 409 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 466
+ D T +W + + R +++ H E + + +W + D I
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSW-SPDGSKIA 302
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
A + + + +WD + ++ L GH + + HP D ++LSA D + + +I
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP-DEPIILSASSDKRLYMGEI 357
Score = 68 (29.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 300
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 301 VNGFNYLASTSTDGCIGFW 319
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 101
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 49/212 (23%), Positives = 96/212 (45%)
Query: 202 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 176 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN-TYQVLAVTFNDTSDQ 234
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRIWD 290
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 291 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVW--DTTSR 344
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ + ++ H+ V+ + + +S S D
Sbjct: 345 RI-LYKLPGHAGSVNELAFHPEEPIILSASSD 375
Score = 143 (55.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 150
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 151 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLW 206
Score = 116 (45.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 48/160 (30%), Positives = 69/160 (43%)
Query: 441 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 500
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 215 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 269
Query: 501 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
+ LLS D + IWD+ + K+R K F V E L WSPDG+ A
Sbjct: 270 LSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 328
Query: 559 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 589
+ D+ ++Y L G N EL FH +
Sbjct: 329 GGSADRFVYVWDTTSRRILYKLPGHAGSVN---ELAFHPE 365
Score = 70 (29.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/176 (19%), Positives = 70/176 (39%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 223 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 279
Query: 409 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 466
+ D T IW + + R +++ H E + + +W +
Sbjct: 280 NAMDNTVRIWDVRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSWSPDGSKIAG 329
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
F + +WD + ++ L GH V L HP + ++LSA D + + +I
Sbjct: 330 GSADRF-VYVWDTTSRRILYKLPGHAGSVNELAFHP-EEPIILSASSDKRLYMGEI 383
Score = 57 (25.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/48 (39%), Positives = 22/48 (45%)
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
API +L GH+G + F P G N LAS D I W D D
Sbjct: 84 APIMLLSGHEGEVYCCKFHPW---G-NTLASAGFDRLILLWNVYGDCD 127
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 210 (79.0 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 90/375 (24%), Positives = 158/375 (42%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV CV F G+ + +G+ D ++LW L T +G + +A L
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHL 166
Query: 262 AAGTVDKTIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 319
+G+ I WN + S L GH+ ITG+++ P+ ++ ++S DG W
Sbjct: 167 VSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIW 226
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
DI + K++ + + + C + G+ + TGS D +++++
Sbjct: 227 ----DITLKKSII---CLSGHTLA-----VTCVKWGGDGI-IYTGSQDCTIKMWET--TQ 271
Query: 380 SPLGILEVEEHSDKVDSIQWS-----------HSHLRFVSGSRDGTALIWYYKC---SQW 425
L I E++ H ++S+ S H+ ++ AL Y K S
Sbjct: 272 GKL-IRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPE 330
Query: 426 RFIR-LDMNTCLPHTKETSDETNKKIK-----VTMVAWDASDRWVITAINFNFQIKIWDA 479
R + D T S + K++ V V + +W+ +A +F+ +++W+
Sbjct: 331 RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASA-SFDKSVRLWNG 389
Query: 480 FNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEG 539
G V V +GH V+ + S DSR+LLS D + IW+I + K + + G
Sbjct: 390 ITGQFVTVFRGHVGPVYQV-SWSADSRLLLSGSKDSTLKIWEIRTKKLK------QDLPG 442
Query: 540 QGEGALFDGKWSPDG 554
+ +F WSPDG
Sbjct: 443 HAD-EVFAVDWSPDG 456
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/212 (24%), Positives = 96/212 (45%)
Query: 202 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 208
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ + V +F + ++L S+SP G +A GS D + + V S
Sbjct: 265 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRS 320
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
LG + S + DS++ + +S S D
Sbjct: 321 -LGQIPRHRLSRQEDSVK-PQEGIXILSASSD 350
Score = 142 (55.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 319
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 320 -KYKLDIDISKTVFHE-PVMFNE 340
+ K I + + V FN+
Sbjct: 182 IRKKAAIQTFQNTYQVLAVTFND 204
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 35/161 (21%), Positives = 75/161 (46%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V V F+ + I++G D IK+W R KL T+RG + ++ +++ + L + +
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 267 DKTIRIWNLQTLAP----ISVLVGH-QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
D T+R+W+++ AP + + G+ + C +G + +A+ S D + W +
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG-SKIAAGSADSFLYPW-H 314
Query: 322 KLDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFL 361
L + + + H + ++P + S+ S L++
Sbjct: 315 SLSVRSLGQIPRHRLSRQEDSVKPQEGIXILSASSDKRLYM 355
Score = 115 (45.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 40/127 (31%), Positives = 58/127 (45%)
Query: 441 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 500
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 501 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Query: 559 L--TDSY 563
DS+
Sbjct: 303 AGSADSF 309
Score = 63 (27.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 300
L G GE+ LA+ D+ I +W++ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 301 VNGFNYLASTSTDGCIGFW 319
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWSVYGDCD 101
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 209 (78.6 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 103/386 (26%), Positives = 169/386 (43%)
Query: 202 GHLSAVFCVLFD-KLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH + F +VTG+ D +LW +AT++G + +S +A +
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASI 191
Query: 261 LAAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEV---NGFNYLASTSTDGCI 316
+A G++D TIR W+ + +PI L H I + + PL + +G LAS S D +
Sbjct: 192 IATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTV 251
Query: 317 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
W KL +T+ +F + A I C + G ++ + S D +R++ D
Sbjct: 252 RIWNVKL-----RTL-----LFT--LSGHTAPITCVRWG-GQNWIYSSSYDKTIRIW--D 296
Query: 377 GVDSP-LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT-------------ALIWYYKC 422
D L IL+ H+ +V+ + S H+ SG+ D T A Y C
Sbjct: 297 AKDGKCLHILK--GHAARVNHLSLSTEHV-LRSGAYDHTDFKPKSFSDERRKAKERYEAC 353
Query: 423 SQWRFIRL-----DMNTCL--PH--TKE-TSDETNKKIKVTMVAWDASDRWVITAINFNF 472
+ RL D+ L P TK T ++K+ V ++ R + TA +F+
Sbjct: 354 LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKV-VNHASFSPDGRCIATA-SFDS 411
Query: 473 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKW 532
+++WD G + L+GH V+ + DSR+L+S+ D + +WD+ S K +
Sbjct: 412 SVRLWDGKTGKFLATLRGHVAAVYQC-AWSTDSRLLVSSSQDTTLKVWDVRSKKMK---- 466
Query: 533 FHNIVEGQGEGALFDGKWSPDGTTCA 558
F + G E +F WSPDG A
Sbjct: 467 FD--LPGH-EDQVFAVDWSPDGQRVA 489
Score = 146 (56.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 67/269 (24%), Positives = 108/269 (40%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR--- 405
+ C +++P +ATGS D+ +R + SP+G + H+ + ++ W HL
Sbjct: 180 VSCVAWAPDASIIATGSMDNTIRFWDPKK-GSPIGDA-LRRHTKPIMALCWQPLHLAPDS 237
Query: 406 ----FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 461
SGS+D T IW K +R + T HT +T V W +
Sbjct: 238 GPYLLASGSKDNTVRIWNVK------LRTLLFTLSGHTAP----------ITCVRWGGQN 281
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
W+ ++ +++ I+IWDA +G + +LKGH V L VL S +D
Sbjct: 282 -WIYSS-SYDKTIRIWDAKDGKCLHILKGHAARVNHLSLST--EHVLRSGAYDHTDFKPK 337
Query: 522 ILSSKQRGYKW-FHNIVEGQGE---GALFDGK---WSPDGTTCALTDSYGHLLVYGLGGF 574
S ++R K + ++ GE A D + W P +T +T +GH V F
Sbjct: 338 SFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASF 397
Query: 575 KRPQNIPRELFFHTDYRTLNRPNGLFEPT 603
F + R + G F T
Sbjct: 398 SPDGRCIATASFDSSVRLWDGKTGKFLAT 426
Score = 134 (52.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V F G I T + D ++LW + GK LATLRG + A + LL
Sbjct: 387 GHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLL 446
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D T+++W++++ L GH+ + V++ P +G +AS D + W +
Sbjct: 447 VSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSP---DG-QRVASGGADKAVRIWSH 502
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/212 (22%), Positives = 95/212 (44%)
Query: 202 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN-TYQVLAVTFNDTSDQ 208
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ + V +F + ++L S+SP G +A GS D V V+ S
Sbjct: 265 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD---TTS 317
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ ++ H+ ++ + + +S S D
Sbjct: 318 RRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 142 (55.0 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLW 180
Score = 114 (45.2 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 38/120 (31%), Positives = 55/120 (45%)
Query: 441 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 500
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 501 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Score = 72 (30.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 34/176 (19%), Positives = 74/176 (42%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 253
Query: 409 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 466
+ D T +W + + R +++ H E + + +W + D I
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSW-SPDGSKIA 302
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
A + + + +WD + ++ L GH + + HP D ++LSA D + + +I
Sbjct: 303 AGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHP-DEPIILSASSDKRLYMGEI 357
Score = 68 (29.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 300
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 301 VNGFNYLASTSTDGCIGFW 319
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 101
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 202 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 149 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 207
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 263
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+ + V +F + ++L S+SP G +A GS D V V+
Sbjct: 264 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 312
Score = 143 (55.4 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 319
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 320 -KYKLDIDISKTVFHE-PVMFNE 340
+ K I + + V FN+
Sbjct: 181 IRKKAAIQTFQNTYQVLAVTFND 203
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 37/148 (25%), Positives = 70/148 (47%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V V F+ + I++G D IK+W R KL T+RG + ++ +++ + L + +
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 255
Query: 267 DKTIRIWNLQTLAP----ISVLVGH-QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK- 320
D T+R+W+++ AP + + G+ + C +G + +A+ S D + W
Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG-SKIAAGSADRFVYVWDT 314
Query: 321 ------YKLDI---DISKTVFH--EPVM 337
YKL I++ FH EP++
Sbjct: 315 TSRRILYKLPGHAGSINEVAFHPDEPII 342
Score = 115 (45.5 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 441 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 500
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 188 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 242
Query: 501 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 243 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 301
Query: 559 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 589
+ D+ ++Y L G N E+ FH D
Sbjct: 302 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 338
Score = 68 (29.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 300
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 118
Query: 301 VNGFNYLASTSTDGCIGFW 319
+G + L S STD + W
Sbjct: 119 TDG-SMLFSASTDKTVAVW 136
Score = 60 (26.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 57 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 100
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/212 (22%), Positives = 96/212 (45%)
Query: 202 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 208
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 265 VRPFAPKERCVR----IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR 318
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ + ++ H+ ++ + + +S S D
Sbjct: 319 RI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 143 (55.4 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 319
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 320 -KYKLDIDISKTVFHE-PVMFNE 340
+ K I + + V FN+
Sbjct: 182 IRKKAAIQTFQNTYQVLAVTFND 204
Score = 112 (44.5 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 46/160 (28%), Positives = 69/160 (43%)
Query: 441 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 500
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 501 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
+ LLS D + +WD+ + K+R + F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Query: 559 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 589
+ D+ ++Y L G N E+ FH D
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 339
Score = 76 (31.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 35/176 (19%), Positives = 74/176 (42%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 253
Query: 409 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 466
+ D T +W + + R +R+ H E + + +W + D I
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVRIFQGNV--HNFEKN--------LLRCSW-SPDGSKIA 302
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
A + + + +WD + ++ L GH + + HP D ++LSA D + + +I
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP-DEPIILSASSDKRLYMGEI 357
Score = 68 (29.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 300
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 301 VNGFNYLASTSTDGCIGFW 319
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 101
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 145 (56.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 40/129 (31%), Positives = 63/129 (48%)
Query: 196 QHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
+H L GH +A+ CV F G ++ + + D + LW A + L+ G S ISD+A
Sbjct: 34 RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93
Query: 255 DNRNILLAAGTVDKTIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 313
+ + + + D T+RIW+ ++ + VL GH + VNF P N + S S D
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS----NLIVSGSFD 149
Query: 314 GCIGFWKYK 322
I W+ K
Sbjct: 150 ETIRIWEVK 158
Score = 142 (55.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 55/222 (24%), Positives = 98/222 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFCV F+ +IV+G+ D I++W + GK + ++ S IS + + L+
Sbjct: 126 GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLI 185
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + D + +IW+ + + L+ + V+F NG L +T D + Y
Sbjct: 186 VSASHDGSCKIWDAKEGTCLKTLIDDKS--PAVSFAKFSPNGKFILVAT-LDSTLKLSNY 242
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 380
+ H +F + S+FS G ++ +GS D+ V ++ + +
Sbjct: 243 ATGKFLKVYTGHTNKVF----------CITSAFSVTNGKYIVSGSEDNCVYLWDLQARN- 291
Query: 381 PLGILE-VEEHSDKVDSIQWSHSHLRFVSGSR---DGTALIW 418
IL+ +E H+D V S+ H +S S D T IW
Sbjct: 292 ---ILQRLEGHTDAVISVS-CHPVQNEISSSGNHLDKTIRIW 329
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 70/299 (23%), Positives = 120/299 (40%)
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
L TL G + IS + N LLA+ +VDKT+ +W+ + I GH I+ + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWS- 94
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPG 357
+ +Y S S D + W + + K + H +F P + I+ SF
Sbjct: 95 ---SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDET 151
Query: 358 GLF--LATGSGDHHVRVYKM--DGVD-SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ TG ++ + M V + G L V D I + + D
Sbjct: 152 IRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDD 211
Query: 413 GTALIWYYKCS-QWRFI---RLDMNTCLPH------TKETSDETNKKIKVTMVAWDASDR 462
+ + + K S +FI LD L + K + TNK +T + +
Sbjct: 212 KSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGK 271
Query: 463 WVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH-DGLIIIW 520
++++ N + +WD +++Q L+GHT+ V + HP + + S H D I IW
Sbjct: 272 YIVSGSEDNC-VYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 108 (43.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 33/138 (23%), Positives = 63/138 (45%)
Query: 387 VEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDET 446
++ HS + S+ ++ VS S DG+ IW K TCL K D+
Sbjct: 166 IKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK----------EGTCL---KTLIDD- 211
Query: 447 NKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES--HPFD 504
K V+ + + ++++ A + +K+ + G ++V GHTN+VF + S +
Sbjct: 212 -KSPAVSFAKFSPNGKFILVA-TLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTN 269
Query: 505 SRVLLSAGHDGLIIIWDI 522
+ ++S D + +WD+
Sbjct: 270 GKYIVSGSEDNCVYLWDL 287
Score = 99 (39.9 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I + +F+ I+IW+ G V+++K H+ + + + D +++SA HDG IWD
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR-DGSLIVSASHDGSCKIWD-- 198
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT--TCALTDSYGHLLVYGLGGF 574
+K+ G +++ + F K+SP+G A DS L Y G F
Sbjct: 199 -AKE-G-TCLKTLIDDKSPAVSF-AKFSPNGKFILVATLDSTLKLSNYATGKF 247
Score = 67 (28.6 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 23/86 (26%), Positives = 33/86 (38%)
Query: 333 HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD 392
++P + + A I C FS G LA+ S D + ++ I E HS
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSL---IHRYEGHSS 86
Query: 393 KVDSIQWSHSHLRFVSGSRDGTALIW 418
+ + WS S S D T IW
Sbjct: 87 GISDLAWSSDSHYTCSASDDCTLRIW 112
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 173 (66.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 417 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 474
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 475 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 526
Query: 318 FWKYK 322
W K
Sbjct: 527 IWDIK 531
Score = 152 (58.6 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 461 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 517
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 518 S-GNADSTVKIWDIKTGQCLQTLQGPSKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 570
Query: 319 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 358
W K I V E V++ RIR N ++C+ S G
Sbjct: 571 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 613
Score = 118 (46.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 340 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 397
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 398 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 431
Score = 109 (43.4 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 202 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 381 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 437
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 438 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 488
Score = 96 (38.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 426 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 479
Query: 512 GHDGLIIIWDI 522
D I +WD+
Sbjct: 480 SLDTSIRVWDV 490
Score = 84 (34.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + N + +KIWD G +Q L+G + + F+ ++++ DG + +WD+
Sbjct: 515 ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 574
Query: 524 SSKQRGYKWFHNIV--EGQGEGAL 545
+ + + N+V E G G +
Sbjct: 575 TGE-----FIRNLVTLESGGSGGV 593
Score = 78 (32.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 431 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 451 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 501
Query: 491 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
H + +E +L+S D + IWDI
Sbjct: 502 HQSLTSGME---LKDNILVSGNADSTVKIWDI 530
Score = 61 (26.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 32/131 (24%), Positives = 59/131 (45%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G+ + +GS D +RV+ V++ I + H ++ + L VSG+ D T I
Sbjct: 473 GIHVVSGSLDTSIRVWD---VETGNCIHTLTGHQSLTSGMELKDNIL--VSGNADSTVKI 527
Query: 418 WYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIW 477
W K Q CL + S + VT + ++ + +VIT+ + + +K+W
Sbjct: 528 WDIKTGQ----------CLQTLQGPSKHQSA---VTCLQFNKN--FVITSSD-DGTVKLW 571
Query: 478 DAFNGDLVQVL 488
D G+ ++ L
Sbjct: 572 DLKTGEFIRNL 582
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 173 (66.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 375 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 432
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 433 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 484
Query: 318 FWKYK 322
W K
Sbjct: 485 IWDIK 489
Score = 152 (58.6 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 419 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 475
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 476 S-GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 528
Query: 319 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 358
W K I V E V++ RIR N ++C+ S G
Sbjct: 529 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 571
Score = 118 (46.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 298 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 355
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 356 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 389
Score = 109 (43.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 202 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 339 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 395
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 396 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 446
Score = 96 (38.9 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 384 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 437
Query: 512 GHDGLIIIWDI 522
D I +WD+
Sbjct: 438 SLDTSIRVWDV 448
Score = 83 (34.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + N + +KIWD G +Q L+G + F+ ++++ DG + +WD+
Sbjct: 473 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 532
Query: 524 SSKQRGYKWFHNIV--EGQGEGAL 545
+ + + N+V E G G +
Sbjct: 533 TGE-----FIRNLVTLESGGSGGV 551
Score = 78 (32.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 431 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 409 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 459
Query: 491 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
H + +E +L+S D + IWDI
Sbjct: 460 HQSLTSGME---LKDNILVSGNADSTVKIWDI 488
Score = 65 (27.9 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G+ + +GS D +RV+ V++ I + H ++ + L VSG+ D T I
Sbjct: 431 GIHVVSGSLDTSIRVWD---VETGNCIHTLTGHQSLTSGMELKDNIL--VSGNADSTVKI 485
Query: 418 WYYKCSQWRFIRLDMNTCLPHTKETSDETNK-KIKVTMVAWDASDRWVITAINFNFQIKI 476
W K Q CL +T NK + VT + ++ + +VIT+ + + +K+
Sbjct: 486 WDIKTGQ----------CL----QTLQGPNKHQSAVTCLQFNKN--FVITSSD-DGTVKL 528
Query: 477 WDAFNGDLVQVL 488
WD G+ ++ L
Sbjct: 529 WDLKTGEFIRNL 540
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 168 (64.2 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 53/180 (29%), Positives = 87/180 (48%)
Query: 195 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
R+ Y +GH + + +F+ +I+TG+ D KLW A +GK +ATL G EI D
Sbjct: 252 RKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCF 311
Query: 255 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 314
D L+A + D T RI++ T ++ L GH+G I+ ++F P G N L + S+D
Sbjct: 312 DYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNP---QG-NRLLTGSSDK 367
Query: 315 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W + + H +F+ C+ F+ G + TGS D+ R+++
Sbjct: 368 TARIWDAQTGQCLQVLEGHTDEIFS-----------CA-FNYKGDIIITGSKDNTCRIWR 415
Score = 163 (62.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 202 GHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH + V+ + F+ G+ I TG+ D KLW GK T RG + EI ++ + ++ L
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTL 191
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+A G++D T ++W++Q+ + L GH I ++F +G N + + S D + W+
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSF---NTSG-NRIITGSFDHTVTVWE 247
Score = 146 (56.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + + F+ G I+TG+ D + +W A G+ + TL G EIS + L+
Sbjct: 217 GHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLI 276
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
G++DKT ++W+ ++ L GH I ++ C + G +A+ S DG +
Sbjct: 277 LTGSMDKTCKLWDAVNGKCVATLTGHDDEI--LDSC-FDYTG-KLIATASADGTARIFSA 332
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
++K HE I SF+P G L TGS D R++
Sbjct: 333 ATRECVTKLEGHE------------GEISKISFNPQGNRLLTGSSDKTARIW 372
Score = 141 (54.7 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + C+ F+ ++ TG+ D KLW + G+ + TL G S EI ++ + +
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRI 234
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF---CPLEVNG 303
G+ D T+ +W T + L+GH I+ F C L + G
Sbjct: 235 ITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTG 279
Score = 88 (36.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLG-ILEV-EEHSDKVDSIQWSHSHLRFVSGS 410
SF+P G L TGS D R++ D+ G L+V E H+D++ S +++ ++GS
Sbjct: 352 SFNPQGNRLLTGSSDKTARIW-----DAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGS 406
Query: 411 RDGTALIW 418
+D T IW
Sbjct: 407 KDNTCRIW 414
Score = 87 (35.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 475 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
+IWDA G +QVL+GHT+E+F + + ++++ D IW
Sbjct: 370 RIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGDIIITGSKDNTCRIW 414
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 173 (66.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 415 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 472
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 473 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 524
Query: 318 FWKYK 322
W K
Sbjct: 525 IWDIK 529
Score = 152 (58.6 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 459 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 515
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 516 S-GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 568
Query: 319 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 358
W K I V E V++ RIR N ++C+ S G
Sbjct: 569 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 611
Score = 118 (46.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 338 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 395
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 396 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 429
Score = 109 (43.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 202 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 379 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 435
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 436 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 486
Score = 96 (38.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 424 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 477
Query: 512 GHDGLIIIWDI 522
D I +WD+
Sbjct: 478 SLDTSIRVWDV 488
Score = 83 (34.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + N + +KIWD G +Q L+G + F+ ++++ DG + +WD+
Sbjct: 513 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 572
Query: 524 SSKQRGYKWFHNIV--EGQGEGAL 545
+ + + N+V E G G +
Sbjct: 573 TGE-----FIRNLVTLESGGSGGV 591
Score = 78 (32.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 431 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 449 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 499
Query: 491 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
H + +E +L+S D + IWDI
Sbjct: 500 HQSLTSGME---LKDNILVSGNADSTVKIWDI 528
Score = 65 (27.9 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G+ + +GS D +RV+ V++ I + H ++ + L VSG+ D T I
Sbjct: 471 GIHVVSGSLDTSIRVWD---VETGNCIHTLTGHQSLTSGMELKDNIL--VSGNADSTVKI 525
Query: 418 WYYKCSQWRFIRLDMNTCLPHTKETSDETNK-KIKVTMVAWDASDRWVITAINFNFQIKI 476
W K Q CL +T NK + VT + ++ + +VIT+ + + +K+
Sbjct: 526 WDIKTGQ----------CL----QTLQGPNKHQSAVTCLQFNKN--FVITSSD-DGTVKL 568
Query: 477 WDAFNGDLVQVL 488
WD G+ ++ L
Sbjct: 569 WDLKTGEFIRNL 580
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 201 (75.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 67/236 (28%), Positives = 108/236 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V F G ++ +G++D IKLW G L TL G S + +A LL
Sbjct: 39 GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLL 98
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG--FNYLASTSTDGCIGFW 319
A+G+ D TI++WN + + + GH + V F P NG +N + G
Sbjct: 99 ASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP---NGQLWNPAIGSLKHTIEGHS 155
Query: 320 KYKLDIDIS------------KTV--FHEPVMFNERIRPGNAH-ILCSSFSPGGLFLATG 364
+ L + S KT+ + + G+++ +L FSP G LA+G
Sbjct: 156 DWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASG 215
Query: 365 SGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
S D ++++ D P G L+ +E HS+K++S+ +S + SGS D T +W
Sbjct: 216 SNDATIKLW-----DPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLW 266
Score = 185 (70.2 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 85/306 (27%), Positives = 134/306 (43%)
Query: 236 GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVN 295
G L TL G S I + LLA+G+ D TI++W+ + L GH + V
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 296 FCPLEVNGFNYLASTSTDGCIGFW-------KYKLD--IDISKTVFHEP--VMFNERIRP 344
F P NG LAS S+D I W K+ ++ D ++V P ++N I
Sbjct: 91 FSP---NG-QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGS 146
Query: 345 ------GNAH-ILCSSFSPGGLFLATGSGDHHVRVYKMD--GVDSPLGILEVEEHSDKVD 395
G++ +L +FSP G LA+GS + ++++ G+ LG HS+ V
Sbjct: 147 LKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLG-----GHSNWVL 201
Query: 396 SIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMV 455
+ +S SGS D T +W L HT E +NK + +
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPPSGS-----------LKHTLE--GHSNK---IESL 245
Query: 456 AWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDG 515
A+ + + ++ + + + IK+WD G LKGH++ V + P DS++L S D
Sbjct: 246 AFSPNGQ-LLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSP-DSQLLESGSGDN 303
Query: 516 LIIIWD 521
I +WD
Sbjct: 304 TIKLWD 309
Score = 160 (61.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V ++F G ++ +G++D IKLW G L TL G S +I +A LL
Sbjct: 195 GHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLL 254
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
A+G+ D TI++W+ T + L GH ++ V F P L S S D I W
Sbjct: 255 ASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSP----DSQLLESGSGDNTIKLW 308
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 78/303 (25%), Positives = 125/303 (41%)
Query: 247 GEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
G I+DI +D N L + K W + + L GH I V F P +G
Sbjct: 5 GIITDI-VDCINTLQSTLQRPKVEDNWGPE----LQTLEGHSDWIETVTFSP---DG-RL 55
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVM--FNERIRPGNAHILCSSFSPGGLFLATG 364
LAS S D I W +P + + ++ + +FSP G LA+G
Sbjct: 56 LASGSNDTTIKLW--------------DPASGGLKQTLEGHSSSVQSVAFSPNGQLLASG 101
Query: 365 SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS---------HLRF-VSGSRDGT 414
S D ++++ DS +E HSD+V+S+ +S + L+ + G D
Sbjct: 102 SSDTTIKLWN-SASDSLKHTME--GHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWV 158
Query: 415 ALIWYYKCSQW-------RFIRL-DMNTC-LPHTKETSDETNKKIKVTMVAWDASDRWVI 465
+ + Q + I+L D TC L HT +N V + + R +
Sbjct: 159 LSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHT--LGGHSNW---VLPLVFSPDGRLLA 213
Query: 466 TAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 525
+ N + IK+WD +G L L+GH+N++ L P + ++L S D I +WD +
Sbjct: 214 SGSN-DATIKLWDPPSGSLKHTLEGHSNKIESLAFSP-NGQLLASGSSDATIKLWDTATG 271
Query: 526 KQR 528
R
Sbjct: 272 SFR 274
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 173 (66.0 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 495 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 552
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 553 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 604
Query: 318 FWKYK 322
W K
Sbjct: 605 IWDIK 609
Score = 152 (58.6 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 539 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 595
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 596 S-GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 648
Query: 319 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 358
W K I V E V++ RIR N ++C+ S G
Sbjct: 649 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 691
Score = 118 (46.6 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 418 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 475
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 476 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 509
Score = 109 (43.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 202 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 459 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 515
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 516 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 566
Score = 96 (38.9 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 504 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 557
Query: 512 GHDGLIIIWDI 522
D I +WD+
Sbjct: 558 SLDTSIRVWDV 568
Score = 83 (34.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + N + +KIWD G +Q L+G + F+ ++++ DG + +WD+
Sbjct: 593 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 652
Query: 524 SSKQRGYKWFHNIV--EGQGEGAL 545
+ + + N+V E G G +
Sbjct: 653 TGE-----FIRNLVTLESGGSGGV 671
Score = 78 (32.5 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 431 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 529 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 579
Query: 491 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
H + +E +L+S D + IWDI
Sbjct: 580 HQSLTSGME---LKDNILVSGNADSTVKIWDI 608
Score = 65 (27.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G+ + +GS D +RV+ V++ I + H ++ + L VSG+ D T I
Sbjct: 551 GIHVVSGSLDTSIRVWD---VETGNCIHTLTGHQSLTSGMELKDNIL--VSGNADSTVKI 605
Query: 418 WYYKCSQWRFIRLDMNTCLPHTKETSDETNK-KIKVTMVAWDASDRWVITAINFNFQIKI 476
W K Q CL +T NK + VT + ++ + +VIT+ + + +K+
Sbjct: 606 WDIKTGQ----------CL----QTLQGPNKHQSAVTCLQFNKN--FVITSSD-DGTVKL 648
Query: 477 WDAFNGDLVQVL 488
WD G+ ++ L
Sbjct: 649 WDLKTGEFIRNL 660
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 173 (66.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 500 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 557
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 558 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 609
Query: 318 FWKYK 322
W K
Sbjct: 610 IWDIK 614
Score = 152 (58.6 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 544 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 600
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 601 S-GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 653
Query: 319 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 358
W K I V E V++ RIR N ++C+ S G
Sbjct: 654 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 696
Score = 118 (46.6 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 423 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 480
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 481 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 514
Score = 109 (43.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 202 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 464 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 520
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 521 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 571
Score = 96 (38.9 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 509 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 562
Query: 512 GHDGLIIIWDI 522
D I +WD+
Sbjct: 563 SLDTSIRVWDV 573
Score = 83 (34.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + N + +KIWD G +Q L+G + F+ ++++ DG + +WD+
Sbjct: 598 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 657
Query: 524 SSKQRGYKWFHNIV--EGQGEGAL 545
+ + + N+V E G G +
Sbjct: 658 TGE-----FIRNLVTLESGGSGGV 676
Score = 78 (32.5 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 431 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 534 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 584
Query: 491 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
H + +E +L+S D + IWDI
Sbjct: 585 HQSLTSGME---LKDNILVSGNADSTVKIWDI 613
Score = 65 (27.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G+ + +GS D +RV+ V++ I + H ++ + L VSG+ D T I
Sbjct: 556 GIHVVSGSLDTSIRVWD---VETGNCIHTLTGHQSLTSGMELKDNIL--VSGNADSTVKI 610
Query: 418 WYYKCSQWRFIRLDMNTCLPHTKETSDETNK-KIKVTMVAWDASDRWVITAINFNFQIKI 476
W K Q CL +T NK + VT + ++ + +VIT+ + + +K+
Sbjct: 611 WDIKTGQ----------CL----QTLQGPNKHQSAVTCLQFNKN--FVITSSD-DGTVKL 653
Query: 477 WDAFNGDLVQVL 488
WD G+ ++ L
Sbjct: 654 WDLKTGEFIRNL 665
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 173 (66.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 548 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 605
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 606 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 657
Query: 318 FWKYK 322
W K
Sbjct: 658 IWDIK 662
Score = 149 (57.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 592 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 648
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 649 S-GNADSTVKIWDIKTGQCLQTLQGPHKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 701
Query: 319 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 358
W + I V E V++ RIR N ++C+ S G
Sbjct: 702 WDLRTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 744
Score = 118 (46.6 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 471 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 528
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 529 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 562
Score = 109 (43.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 202 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 512 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 568
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 569 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 619
Score = 96 (38.9 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 557 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 610
Query: 512 GHDGLIIIWDI 522
D I +WD+
Sbjct: 611 SLDTSIRVWDV 621
Score = 83 (34.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 23/87 (26%), Positives = 44/87 (50%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKG---HTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
++ + N + +KIWD G +Q L+G H + V L+ F+ ++++ DG + +W
Sbjct: 646 ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQ---FNKNFVITSSDDGTVKLW 702
Query: 521 DILSSKQRGYKWFHNIV--EGQGEGAL 545
D+ R ++ N+V E G G +
Sbjct: 703 DL-----RTGEFIRNLVTLESGGSGGV 724
Score = 78 (32.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 431 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 582 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 632
Query: 491 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
H + +E +L+S D + IWDI
Sbjct: 633 HQSLTSGME---LKDNILVSGNADSTVKIWDI 661
Score = 60 (26.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 32/132 (24%), Positives = 61/132 (46%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G+ + +GS D +RV+ V++ I + H ++ + L VSG+ D T I
Sbjct: 604 GIHVVSGSLDTSIRVWD---VETGNCIHTLTGHQSLTSGMELKDNIL--VSGNADSTVKI 658
Query: 418 WYYKCSQWRFIRLDMNTCL-PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKI 476
W K Q + T PH +++ VT + ++ + +VIT+ + + +K+
Sbjct: 659 WDIKTGQC------LQTLQGPHKHQSA--------VTCLQFNKN--FVITSSD-DGTVKL 701
Query: 477 WDAFNGDLVQVL 488
WD G+ ++ L
Sbjct: 702 WDLRTGEFIRNL 713
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 200 (75.5 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 90/385 (23%), Positives = 161/385 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKL 173
Query: 262 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 319
A+G + I +W+ T + L GH ITG+++ PL +N Y+AS+S DG + W
Sbjct: 174 ASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW 233
Query: 320 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 362
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 234 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 293
Query: 363 TG--SGDHHVRVYKMDGVDSPL------GIL-EVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
T S D+ +R + ++ + G L E++E + ++ R VSGS D
Sbjct: 294 TMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDF 353
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W + K + T + + V + R ++ + +F+
Sbjct: 354 TLFLW---------------SPAEDKKPLARMTGHQALINQVLFSPDSR-IVASASFDKS 397
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 533
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 398 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQK------L 450
Query: 534 HNIVEGQGEGALFDGKWSPDGTTCA 558
+ G + ++ WSPDG A
Sbjct: 451 TTDLPGHAD-EVYAVDWSPDGQRVA 474
Score = 155 (59.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + VLF ++ + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 372 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 431
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 432 VSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 486
Score = 125 (49.1 bits), Expect = 0.00041, P = 0.00041
Identities = 81/357 (22%), Positives = 140/357 (39%)
Query: 197 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA-TLRGCSGEISDIAID 255
H+ GH V + + G+ + +G + I LW G + TL G S I+ ++ +
Sbjct: 151 HFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWE 210
Query: 256 NRNI-----LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 310
++ +A+ + D ++R+W+ +L GH +T C L G L S
Sbjct: 211 PLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT----C-LRWGGDGLLYSA 265
Query: 311 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 370
S D I W+ H+ V+ R G+ H + + L TG+ +
Sbjct: 266 SQDRTIKVWRA-----------HDGVLC--RTLQGHGHWVNTMALSTDYALRTGAFEPAE 312
Query: 371 RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 430
+ L L+ E S + + ++ R VSGS D T +W + R+
Sbjct: 313 ATVNAQDLQGSLKELK-ERASSRYNLVRGQGPE-RLVSGSDDFTLFLWSPAEDKKPLARM 370
Query: 431 D-----MNTCL--PHTKETSDET-NKKIK-------------------VTMVAWDASDRW 463
+N L P ++ + + +K IK V +AW A R
Sbjct: 371 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 430
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
+++ + + +K+WD L L GH +EV+ ++ P RV S G D + IW
Sbjct: 431 LVSGSS-DSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVA-SGGKDKCLRIW 485
Score = 122 (48.0 bits), Expect = 0.00088, P = 0.00088
Identities = 47/182 (25%), Positives = 80/182 (43%)
Query: 240 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 299
++L G S + +A LA+G+ D T+R W+L T P GH+ + +++ P
Sbjct: 110 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP- 168
Query: 300 EVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGG 358
+G LAS +G I W + +T+ H + P H+ +P
Sbjct: 169 --DG-KKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEP--LHM-----NPEC 218
Query: 359 LFLATGSGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRFVSGSRDGTAL 416
++A+ S D VRV+ D+ G E + H+ V ++W L + S S+D T
Sbjct: 219 RYVASSSKDGSVRVW-----DTTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIK 272
Query: 417 IW 418
+W
Sbjct: 273 VW 274
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 169 (64.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 51/177 (28%), Positives = 85/177 (48%)
Query: 202 GHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH + V+ + F+ G+ + TG+ D KLW A GK T RG + EI +A + ++ L
Sbjct: 132 GHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTL 191
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+A G++D T ++W++++ +S L GH I ++ C G + L + S D W
Sbjct: 192 VATGSMDTTAKLWDVESGEEVSTLAGHFAEI--ISLC-FNTTG-DRLVTGSFDHTAILW- 246
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG 377
D+ + V H V+ R I C F+ +AT S D +V+ +G
Sbjct: 247 ---DVPSGRKV-H--VLSGHR-----GEISCVQFNWDCSLIATASLDKSCKVWDAEG 292
Score = 149 (57.5 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 48/182 (26%), Positives = 78/182 (42%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
Y GH + + C+ F+ ++ TG+ D KLW G+ ++TL G EI + +
Sbjct: 171 YTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTT 230
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF---CPLEVNGFNYLASTSTDG 314
L G+ D T +W++ + + VL GH+G I+ V F C L +A+ S D
Sbjct: 231 GDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSL-------IATASLDK 283
Query: 315 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W + ++ + H N +L F+ G +AT S D RV+
Sbjct: 284 SCKVWDAEGGQCLATLLGH------------NDEVLDVCFNYTGQLIATASADGTSRVFS 331
Query: 375 MD 376
D
Sbjct: 332 TD 333
Score = 144 (55.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 50/179 (27%), Positives = 80/179 (44%)
Query: 195 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
R+ +V GH + CV F+ +I T + D K+W A G+ LATL G + E+ D+
Sbjct: 252 RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCF 311
Query: 255 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 314
+ L+A + D T R+++ T + L GH+G I+ V F G L + S D
Sbjct: 312 NYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCF---NAQGSRVLTA-SVDK 367
Query: 315 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
W K + H +F+ C+ F+ G + TGS D+ R++
Sbjct: 368 TSRVWCVKTGACLQVLEGHSDEIFS-----------CA-FNYEGDTIITGSKDNTCRIW 414
Score = 133 (51.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 49/167 (29%), Positives = 71/167 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR-NILL 261
H+ + V F+K G +TG+ D K+W G+ L TL G + IA +N +
Sbjct: 91 HILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKV 150
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A G+ DKT ++W+ +T GH I + F P +A+ S D W
Sbjct: 151 ATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST----LVATGSMDTTAKLWDV 206
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDH 368
+ ++S H F E I LC F+ G L TGS DH
Sbjct: 207 ESGEEVSTLAGH----FAEIIS------LC--FNTTGDRLVTGSFDH 241
Score = 78 (32.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 18/72 (25%), Positives = 39/72 (54%)
Query: 449 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K +++ V ++A V+TA + + ++W G +QVL+GH++E+F + ++ +
Sbjct: 345 KGEISKVCFNAQGSRVLTA-SVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFN-YEGDTI 402
Query: 509 LSAGHDGLIIIW 520
++ D IW
Sbjct: 403 ITGSKDNTCRIW 414
Score = 72 (30.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR ++T +F+ +WD +G V VL GH E+ ++ + +D ++ +A D +W
Sbjct: 232 DR-LVTG-SFDHTAILWDVPSGRKVHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVW 288
Query: 521 D 521
D
Sbjct: 289 D 289
Score = 69 (29.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
F+ G + T S D RV+ + + L +LE HSD++ S +++ ++GS+D
Sbjct: 353 FNAQGSRVLTASVDKTSRVWCVK-TGACLQVLE--GHSDEIFSCAFNYEGDTIITGSKDN 409
Query: 414 TALIWY 419
T IW+
Sbjct: 410 TCRIWH 415
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 198 (74.8 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 91/385 (23%), Positives = 162/385 (42%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTL 122
Query: 262 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 319
A+G + I +W+ T + VL GH ITG+++ PL N Y+AS+S DG + W
Sbjct: 123 ASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVW 182
Query: 320 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 362
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 183 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 242
Query: 363 TG--SGDHHVRVYKMDGVDSPL------GIL-EVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
T S D+ +R + ++ + G L E+++ + + ++ R VSGS D
Sbjct: 243 TMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDF 302
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W + K + T + + V + R +I + +F+
Sbjct: 303 TLFMW---------------SPAEDKKPLARMTGHQALINQVLFSPDSR-IIASASFDKS 346
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 533
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 347 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQKLAAD--- 402
Query: 534 HNIVEGQGEGALFDGKWSPDGTTCA 558
+ G + ++ WSPDG A
Sbjct: 403 ---LPGHAD-EVYAVDWSPDGQRVA 423
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + VLF +I + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 321 GHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 380
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 381 VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 435
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 177 (67.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/166 (25%), Positives = 71/166 (42%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD 367
D+ K + P G +++ F P LA+GS D
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSD 210
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 313
LA+ D T+++W+L +S GH G + V F P E LAS S+D
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSD 210
Score = 86 (35.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 34/123 (27%), Positives = 53/123 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I A + + I++WD +++ L GH + L+ HP+ V S D I +WDI
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI- 134
Query: 524 SSKQRGYKWFHNIVEGQGEGAL-F--DGKW---SPDGTTCALTDSYGHLLVYGLGGFKRP 577
+++G F Q L F DGKW + D T L D ++ G P
Sbjct: 135 --RRKGCV-FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 578 QNI 580
N+
Sbjct: 192 VNV 194
Score = 75 (31.5 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G LATG D V ++ ++ P I+ + H+ V+S++ + V+GS+ G+ +
Sbjct: 33 GRLLATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 418 W 418
W
Sbjct: 90 W 90
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 177 (67.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 21 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 80
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 81 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 136
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 137 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 180
Score = 116 (45.9 bits), Expect = 0.00059, P = 0.00059
Identities = 29/100 (29%), Positives = 46/100 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 106 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 165
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
LA+ D T+++W+L +S GH G + V F P E
Sbjct: 166 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 205
Score = 86 (35.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 34/123 (27%), Positives = 53/123 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I A + + I++WD +++ L GH + L+ HP+ V S D I +WDI
Sbjct: 81 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI- 138
Query: 524 SSKQRGYKWFHNIVEGQGEGAL-F--DGKW---SPDGTTCALTDSYGHLLVYGLGGFKRP 577
+++G F Q L F DGKW + D T L D ++ G P
Sbjct: 139 --RRKGCV-FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 195
Query: 578 QNI 580
N+
Sbjct: 196 VNV 198
Score = 75 (31.5 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G LATG D V ++ ++ P I+ + H+ V+S++ + V+GS+ G+ +
Sbjct: 37 GRLLATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 93
Query: 418 W 418
W
Sbjct: 94 W 94
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 198 (74.8 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 89/385 (23%), Positives = 161/385 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKL 171
Query: 262 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 319
A+G + + +W+ T + L GH ITG+++ PL +N Y+AS+S DG + W
Sbjct: 172 ASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW 231
Query: 320 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 362
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 291
Query: 363 TG--SGDHHVRVYKMDGVDSPL------GIL-EVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
T S D+ +R + ++ + G L E++E + ++ R VSGS D
Sbjct: 292 TMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDF 351
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W + K + T + + V + R ++ + +F+
Sbjct: 352 TLFLW---------------SPAEDKKPLARMTGHQALINQVLFSPDSR-IVASASFDKS 395
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 533
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 396 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQK------L 448
Query: 534 HNIVEGQGEGALFDGKWSPDGTTCA 558
+ G + ++ WSPDG A
Sbjct: 449 ATDLPGHAD-EVYAVDWSPDGQRVA 472
Score = 155 (59.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + VLF ++ + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 430 VSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 484
Score = 124 (48.7 bits), Expect = 0.00053, P = 0.00053
Identities = 46/182 (25%), Positives = 81/182 (44%)
Query: 240 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 299
++L G S + +A LA+G+ D T+R W+L T P GH+ + +++ P
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP- 166
Query: 300 EVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGG 358
+G LAS +G + W + + +T+ H + P H+ +P
Sbjct: 167 --DG-KKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEP--LHM-----NPEC 216
Query: 359 LFLATGSGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRFVSGSRDGTAL 416
++A+ S D VRV+ D+ G E + H+ V ++W L + S S+D T
Sbjct: 217 RYVASSSKDGSVRVW-----DTTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIK 270
Query: 417 IW 418
+W
Sbjct: 271 VW 272
Score = 123 (48.4 bits), Expect = 0.00068, P = 0.00068
Identities = 80/357 (22%), Positives = 140/357 (39%)
Query: 197 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA-TLRGCSGEISDIAID 255
H+ GH V + + G+ + +G + + LW G + TL G S I+ ++ +
Sbjct: 149 HFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWE 208
Query: 256 NRNI-----LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 310
++ +A+ + D ++R+W+ +L GH +T C L G L S
Sbjct: 209 PLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT----C-LRWGGDGLLYSA 263
Query: 311 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 370
S D I W+ H+ V+ R G+ H + + L TG+ +
Sbjct: 264 SQDRTIKVWRA-----------HDGVLC--RTLQGHGHWVNTMALSTDYALRTGAFEPAE 310
Query: 371 RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 430
+ L L+ E S + + ++ R VSGS D T +W + R+
Sbjct: 311 ATVNAQDLQGSLKELK-ERASSRYNLVRGQGPE-RLVSGSDDFTLFLWSPAEDKKPLARM 368
Query: 431 D-----MNTCL--PHTKETSDET-NKKIK-------------------VTMVAWDASDRW 463
+N L P ++ + + +K IK V +AW A R
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
+++ + + +K+WD L L GH +EV+ ++ P RV S G D + IW
Sbjct: 429 LVSGSS-DSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA-SGGKDKCLRIW 483
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 163 (62.4 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 36/128 (28%), Positives = 68/128 (53%)
Query: 196 QHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
+H L GH +AV CV FD G +V+G D +K+W A G+ + TL G + + +
Sbjct: 369 RHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF 426
Query: 255 DNRNILLAAGTVDKTIRIWNL---QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 311
++ ++ +G++D +IR+W+ + +++L GH + +G +++ G N L S +
Sbjct: 427 ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG-----MQLRG-NILVSCN 480
Query: 312 TDGCIGFW 319
D + W
Sbjct: 481 ADSHVRVW 488
Score = 144 (55.7 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
Y +GH V+ + G IV+G+ D +K+W DG LL TL+G + + +A+
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS 349
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+L G+ D T+R+W++++ ++ L GH + V F
Sbjct: 350 --ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Score = 139 (54.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V C+ G ++VTG+ D +++W G+ LATL G + + D ++
Sbjct: 336 GHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV- 392
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G D T++IWN T I L GH + + F + + + S S D I W +
Sbjct: 393 -SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF----ESERSIVCSGSLDTSIRVWDF 447
Score = 126 (49.4 bits), Expect = 0.00043, P = 0.00043
Identities = 32/121 (26%), Positives = 63/121 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLW---RARDGKLLATLRGCSGEISDIAIDNRN 258
GH + V+ +LF+ ++ +G+ D I++W R + +A L+G + S + + N
Sbjct: 416 GHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG-N 474
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
IL++ D +R+W++ + +L GH+ IT + + G N +A++S DG +
Sbjct: 475 ILVSCNA-DSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-----GRNMVATSSDDGTVKL 528
Query: 319 W 319
W
Sbjct: 529 W 529
Score = 110 (43.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 276
+V+VTG+DD +K+W G+++ TL G +G + I + +G+ D+T+++W+
Sbjct: 267 DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 277 TLAPISVLVGHQGII 291
+ + L GH +
Sbjct: 327 DGSLLHTLQGHTSTV 341
Score = 89 (36.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
D + + ++F +KIW+A G ++ L GH N V+ L + ++ S D I +W
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES-ERSIVCSGSLDTSIRVW 445
Query: 521 D 521
D
Sbjct: 446 D 446
Score = 88 (36.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
++ + N + +++WD G V +L GH + + L+ F ++ ++ DG + +WDI
Sbjct: 475 ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWDI 531
Score = 68 (29.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
+++WD +G + L GH V ++ FD ++S G+D + IW+
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQ---FDGTTVVSGGYDFTVKIWN 404
Score = 65 (27.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 30/155 (19%), Positives = 64/155 (41%)
Query: 346 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 405
+A + C F G + +G D V+++ + I + H+++V S+ +
Sbjct: 378 HAAVRCVQFD--GTTVVSGGYDFTVKIWN---AHTGRCIRTLTGHNNRVYSLLFESERSI 432
Query: 406 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK-ETSDETNKKIKVTMVAWDASDRWV 464
SGS D + +W F R + C+ + TS + +++ +
Sbjct: 433 VCSGSLDTSIRVW-------DFTRPEGQECVALLQGHTSLTSGMQLRGN----------I 475
Query: 465 ITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLE 499
+ + N + +++WD G V +L GH + + L+
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQ 510
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 163 (62.4 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 36/128 (28%), Positives = 68/128 (53%)
Query: 196 QHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
+H L GH +AV CV FD G +V+G D +K+W A G+ + TL G + + +
Sbjct: 369 RHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF 426
Query: 255 DNRNILLAAGTVDKTIRIWNL---QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 311
++ ++ +G++D +IR+W+ + +++L GH + +G +++ G N L S +
Sbjct: 427 ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG-----MQLRG-NILVSCN 480
Query: 312 TDGCIGFW 319
D + W
Sbjct: 481 ADSHVRVW 488
Score = 144 (55.7 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
Y +GH V+ + G IV+G+ D +K+W DG LL TL+G + + +A+
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS 349
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+L G+ D T+R+W++++ ++ L GH + V F
Sbjct: 350 --ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Score = 139 (54.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V C+ G ++VTG+ D +++W G+ LATL G + + D ++
Sbjct: 336 GHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV- 392
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G D T++IWN T I L GH + + F + + + S S D I W +
Sbjct: 393 -SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF----ESERSIVCSGSLDTSIRVWDF 447
Score = 126 (49.4 bits), Expect = 0.00043, P = 0.00043
Identities = 32/121 (26%), Positives = 63/121 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLW---RARDGKLLATLRGCSGEISDIAIDNRN 258
GH + V+ +LF+ ++ +G+ D I++W R + +A L+G + S + + N
Sbjct: 416 GHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG-N 474
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
IL++ D +R+W++ + +L GH+ IT + + G N +A++S DG +
Sbjct: 475 ILVSCNA-DSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-----GRNMVATSSDDGTVKL 528
Query: 319 W 319
W
Sbjct: 529 W 529
Score = 110 (43.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 276
+V+VTG+DD +K+W G+++ TL G +G + I + +G+ D+T+++W+
Sbjct: 267 DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 277 TLAPISVLVGHQGII 291
+ + L GH +
Sbjct: 327 DGSLLHTLQGHTSTV 341
Score = 89 (36.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
D + + ++F +KIW+A G ++ L GH N V+ L + ++ S D I +W
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES-ERSIVCSGSLDTSIRVW 445
Query: 521 D 521
D
Sbjct: 446 D 446
Score = 88 (36.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
++ + N + +++WD G V +L GH + + L+ F ++ ++ DG + +WDI
Sbjct: 475 ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWDI 531
Score = 68 (29.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
+++WD +G + L GH V ++ FD ++S G+D + IW+
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQ---FDGTTVVSGGYDFTVKIWN 404
Score = 65 (27.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 30/155 (19%), Positives = 64/155 (41%)
Query: 346 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 405
+A + C F G + +G D V+++ + I + H+++V S+ +
Sbjct: 378 HAAVRCVQFD--GTTVVSGGYDFTVKIWN---AHTGRCIRTLTGHNNRVYSLLFESERSI 432
Query: 406 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK-ETSDETNKKIKVTMVAWDASDRWV 464
SGS D + +W F R + C+ + TS + +++ +
Sbjct: 433 VCSGSLDTSIRVW-------DFTRPEGQECVALLQGHTSLTSGMQLRGN----------I 475
Query: 465 ITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLE 499
+ + N + +++WD G V +L GH + + L+
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQ 510
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 150 (57.9 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 57/263 (21%), Positives = 109/263 (41%)
Query: 118 SLLVPNSVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYS 177
SL+ S +NT +L + E S P L+ + S S+K+ + + +S+ +
Sbjct: 255 SLITIYSYAFYNTEQLLNTAEAS-P-DNKLLATGLNNS-----SIKLWSLTSKFKSKPHQ 307
Query: 178 GPLSRFLMISS-----HKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR 232
+S +I+ + + V LGH V+ F +++ ++D I+ W
Sbjct: 308 IDVSHIHLINDTLEVDEEDRTATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWD 367
Query: 233 ARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIIT 292
+G + + D+ I ++ A+ + D T R+W+ P+ + GH +
Sbjct: 368 LESFTNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVD 427
Query: 293 GVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS 352
V F P N NYLA+ STD + W + + +F P + C
Sbjct: 428 CVKFHP---NS-NYLATGSTDKTVRLWSAQQGNSVR--------LFTGHCGP----VRCL 471
Query: 353 SFSPGGLFLATGSGDHHVRVYKM 375
+FSP G +L + D ++++ +
Sbjct: 472 AFSPNGQYLVSAGEDQLLKLWDL 494
Score = 145 (56.1 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNIL 260
GHL+ V CV F + TG+ D ++LW A+ G + G G + +A N L
Sbjct: 421 GHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYL 480
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
++AG D+ +++W+L + L GH IT V F L+ + +AS S D + W
Sbjct: 481 VSAGE-DQLLKLWDLASGTLYKDLHGHTDDITSVTFS-LDSS---VIASASMDNSVRIWD 535
Query: 321 YK 322
K
Sbjct: 536 IK 537
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 30/116 (25%), Positives = 59/116 (50%)
Query: 162 VKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVT 221
VK H N L + G + + + S + N + + GH V C+ F G+ +V+
Sbjct: 429 VKFHPNSNYLAT----GSTDKTVRLWSAQQGNSVRLFT--GHCGPVRCLAFSPNGQYLVS 482
Query: 222 GADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 277
+D L+KLW G L L G + +I+ + + ++A+ ++D ++RIW++++
Sbjct: 483 AGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
Score = 101 (40.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 44/163 (26%), Positives = 66/163 (40%)
Query: 276 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEP 335
+T VL+GH G + F P + L S S D I +W + + TV ++
Sbjct: 327 RTATERKVLLGHCGPVYSTRFLP----DSSALLSCSEDTSIRYWDLE---SFTNTVLYQ- 378
Query: 336 VMFNERIRPGNAHILCS-SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKV 394
G+A+ + SP LF A+ S DH R++ D PL I H V
Sbjct: 379 ---------GHAYPVWDLDISPHSLFFASASYDHTARLWSFDRT-YPLRIYA--GHLAGV 426
Query: 395 DSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP 437
D +++ + +GS D T +W Q +RL C P
Sbjct: 427 DCVKFHPNSNYLATGSTDKTVRLW--SAQQGNSVRLFTGHCGP 467
Score = 99 (39.9 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V +A+ + +++++A +K+WD +G L + L GHT+++ + + DS V+ SA
Sbjct: 468 VRCLAFSPNGQYLVSAGEDQL-LKLWDLASGTLYKDLHGHTDDITSV-TFSLDSSVIASA 525
Query: 512 GHDGLIIIWDILS 524
D + IWDI S
Sbjct: 526 SMDNSVRIWDIKS 538
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 154 (59.3 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 37/137 (27%), Positives = 66/137 (48%)
Query: 160 NSVKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVI 219
N KV T V+R R + S + + GH V C+ F++ + +
Sbjct: 339 NHQKVVPTSVVVRKRPWKSVYSERFKLEKNWRKGTHTIKTFTGHSDGVTCLQFNR--KYL 396
Query: 220 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 279
+TG+ D IK+W+ G+ + TL G + + + DN+ ++ +G +D TI++WN T
Sbjct: 397 MTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQKLI--SGGLDSTIKVWNYHTGQ 454
Query: 280 PISVLVGHQGIITGVNF 296
I+ GH+ + V+F
Sbjct: 455 CIATYRGHEDAVVSVDF 471
Score = 125 (49.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V ++FD + +++G D IK+W G+ +AT RG + + N++I+
Sbjct: 421 GHTKGVRALVFDN--QKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIV- 477
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+G+ D T+R+W++ + + L GH VN + + N + S S D I W
Sbjct: 478 -SGSADHTVRVWHVDSRTCYT-LRGHTD---WVNHVKIH-SASNTIFSASDDTTIRMW 529
Score = 96 (38.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V D + IV+G+ D +++W D + TLRG + ++ + I + + +
Sbjct: 461 GHEDAVVSV--DFTNKSIVSGSADHTVRVWHV-DSRTCYTLRGHTDWVNHVKIHSASNTI 517
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVG 286
+ + D TIR+W++ + I V G
Sbjct: 518 FSASDDTTIRMWDMNSNECIKVFGG 542
Score = 86 (35.3 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 526
IK+WD G ++ GH V+ + + F R++ S HD LI +WD+ + K
Sbjct: 650 IKLWDVATGKCIRTQFGHIEGVWSIAADTF--RII-SGAHDRLIKVWDLQNGK 699
Score = 62 (26.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 29/103 (28%), Positives = 44/103 (42%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
H D V S+ +++ + VSGS D T +W+ +D TC T + K
Sbjct: 462 HEDAVVSVDFTNKSI--VSGSADHTVRVWH----------VDSRTCYTLRGHTDWVNHVK 509
Query: 450 I-KVTMVAWDASDRWVITA--INFNFQIKIWDAF--NGDLVQV 487
I + + ASD I +N N IK++ NG + QV
Sbjct: 510 IHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQV 552
Score = 58 (25.5 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 361 LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ +GS DH VRV+ VDS + H+D V+ ++ + S S D T +W
Sbjct: 476 IVSGSADHTVRVWH---VDSRT-CYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMW 529
Score = 42 (19.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 457 WD-ASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN 493
W A+D + I + + IK+WD NG + +++
Sbjct: 672 WSIAADTFRIISGAHDRLIKVWDLQNGKCLHTFSNNSS 709
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 197 (74.4 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 68/223 (30%), Positives = 105/223 (47%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG-KLLATLRGCSGEISDIAIDNRNIL 260
GH V F G I T ++D +LW G K L G S + I+I + L
Sbjct: 385 GHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDGSL 444
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
LA G+ D +RIW+L++ PI GH + V++ P NG+ LAS+S D + W
Sbjct: 445 LATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSP---NGYQ-LASSSEDNTVVIWD 500
Query: 321 YKLDIDISKTVFHEPVM----FNERIRPGNAHILCSSFSPGGL-FLATGSGDHHVRVYKM 375
+ + + H ++ F ++ N + ++ SPG + +LAT S D ++ +
Sbjct: 501 IRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNN--NNSSPGCVNYLATCSFDGKIKTWSP 558
Query: 376 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ SPL E HS KV SI ++S + +S S D T IW
Sbjct: 559 N-TWSPLATFE--GHSSKVTSIDLTNS--KILSTSFDKTWKIW 596
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 149 (57.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + VLF +I + + D IKLW R GK L +LRG + IA + LL
Sbjct: 383 GHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLL 442
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+G+ D T+++W+ +T L GH + ++ P +G +AS D C+ W+
Sbjct: 443 VSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSP---DG-QRVASGGKDKCLRIWR 497
Score = 136 (52.9 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 51/181 (28%), Positives = 79/181 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F G+ + +G+ D ++ W T +G + IA L
Sbjct: 125 GHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKL 184
Query: 262 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 319
A+G + I +W+ T I VL GH IT + + PL +N YLAS S DG I W
Sbjct: 185 ASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIW 244
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAH-ILCSSFSPGGLFLATGSGDHHVRVYK-MDG 377
D + + ++I G+ + C + GL L + S D ++V++ DG
Sbjct: 245 ----DTLMGRC---------DKILTGHTQSVTCVKWGGDGL-LYSSSQDRTIKVWRSQDG 290
Query: 378 V 378
+
Sbjct: 291 I 291
Score = 111 (44.1 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 446 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
T + + V + R +I + +F+ IK+W+ G + L+GH + V+ + + DS
Sbjct: 382 TGHQALINQVLFSPDTR-IIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQI-AWSADS 439
Query: 506 RVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
R+L+S D + +WD +K+ + G + +F WSPDG A
Sbjct: 440 RLLVSGSSDSTLKVWDA-ETKKLAID-----LPGHAD-EVFATDWSPDGQRVA 485
Score = 102 (41.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 44/182 (24%), Positives = 78/182 (42%)
Query: 240 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 299
++L G + + +A LA+G+ D T+R W+L T P GH+ + + + P
Sbjct: 121 SSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSP- 179
Query: 300 EVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGG 358
+G LAS + I W I + + H + P HI +P
Sbjct: 180 --DG-KKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEP--LHI-----NPEC 229
Query: 359 LFLATGSGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRFVSGSRDGTAL 416
+LA+ S D +R++ D+ +G + + H+ V ++W L + S S+D T
Sbjct: 230 RYLASASKDGSIRIW-----DTLMGRCDKILTGHTQSVTCVKWGGDGLLY-SSSQDRTIK 283
Query: 417 IW 418
+W
Sbjct: 284 VW 285
Score = 101 (40.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V +AW A R +++ + + +K+WDA L L GH +EVF + P RV S
Sbjct: 430 VYQIAWSADSRLLVSGSS-DSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVA-SG 487
Query: 512 GHDGLIIIW 520
G D + IW
Sbjct: 488 GKDKCLRIW 496
Score = 86 (35.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH +V CV + G ++ + + D IK+WR++DG L TL+G + ++ +A+ +L
Sbjct: 257 GHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVL 314
Score = 61 (26.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 19/91 (20%), Positives = 39/91 (42%)
Query: 202 GHLSAVFCVLFDKLG-----EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDN 256
GH + C+ ++ L + + + D I++W G+ L G + ++ +
Sbjct: 210 GHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGG 269
Query: 257 RNILLAAGTVDKTIRIWNLQTLAPISVLVGH 287
+L ++ D+TI++W Q L GH
Sbjct: 270 DGLLYSSSQ-DRTIKVWRSQDGILCRTLQGH 299
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 194 (73.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 91/385 (23%), Positives = 161/385 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKL 171
Query: 262 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 319
A+G + I +W+ T + L GH ITG+++ PL N Y+AS+S DG + W
Sbjct: 172 ASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIW 231
Query: 320 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 362
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 291
Query: 363 TG--SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL-------RFVSGSRDG 413
T S D+ +R + ++ + +++ ++ S +L R VSGS D
Sbjct: 292 TMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDF 351
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W S D P T+ T + + V + R ++ + +F+
Sbjct: 352 TLFLW----SPAE----DKK---PLTRMTGHQA----LINQVLFSPDSR-IVASASFDKS 395
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 533
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 396 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQK------L 448
Query: 534 HNIVEGQGEGALFDGKWSPDGTTCA 558
+ G + ++ WSPDG A
Sbjct: 449 AMDLPGHAD-EVYAVDWSPDGQRVA 472
Score = 153 (58.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + VLF ++ + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+G+ D T+++W+++ L GH + V++ P +G +AS D C+ W+
Sbjct: 430 VSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 484
Score = 123 (48.4 bits), Expect = 0.00068, P = 0.00068
Identities = 82/357 (22%), Positives = 140/357 (39%)
Query: 197 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA-TLRGCSGEISDIAID 255
H+ GH V + + G + +G + I LW GK + TL G S I+ ++ +
Sbjct: 149 HFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWE 208
Query: 256 NRNI-----LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 310
+ +A+ + D ++RIW+ +L GH +T C L G L S
Sbjct: 209 PLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVT----C-LRWGGDGLLYSA 263
Query: 311 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 370
S D I W+ H+ V+ R G+ H + + L TG+ +
Sbjct: 264 SQDRTIKVWRA-----------HDGVLC--RTLQGHGHWVNTMALSTDYALRTGAFEPAE 310
Query: 371 RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 430
++ D + E++E + ++ R VSGS D T +W + R+
Sbjct: 311 A--SVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRM 368
Query: 431 D-----MNTCL--PHTKETSDET-NKKIK-------------------VTMVAWDASDRW 463
+N L P ++ + + +K IK V +AW A R
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
+++ + + +K+WD L L GH +EV+ ++ P RV S G D + IW
Sbjct: 429 LVSGSS-DSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVA-SGGKDKCLRIW 483
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 176 (67.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V C+ F+ ++ TG+ D IK+W G+ L TLRG I + D+ ++
Sbjct: 347 GHTNGVMCLQFED--NILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTKLI- 403
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G++D+TI++WN +T IS GH+G + G++F + LAS S D + W +
Sbjct: 404 -SGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF------DASILASGSVDKTVKIWNF 456
Query: 322 K 322
+
Sbjct: 457 E 457
Score = 117 (46.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 177 SGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG 236
SG + R + + + + Y GH V + FD ++ +G+ D +K+W D
Sbjct: 404 SGSMDRTIKVWNWRTGECISTYT--GHRGGVIGLHFD--ASILASGSVDKTVKIWNFED- 458
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
K +LRG + ++ + +D + + + + D T+R+W+L T I GH G + V
Sbjct: 459 KSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVP 518
Query: 297 CPLE 300
P E
Sbjct: 519 LPRE 522
Score = 72 (30.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 459 ASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLII 518
A R+++T+ + I++W+ G ++ GH V+ L + D+ ++S D +I
Sbjct: 577 APPRYMVTSA-LDSTIRLWETTTGRCLRTFFGHLEGVWALGA---DTLRIVSGAEDRMIK 632
Query: 519 IWDILSSK 526
IWD + K
Sbjct: 633 IWDPRTGK 640
Score = 46 (21.3 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEV 495
IKIWD G + GH+ V
Sbjct: 631 IKIWDPRTGKCERTFTGHSGPV 652
Score = 39 (18.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 404 LRFVSGSRDGTALIW 418
LR VSG+ D IW
Sbjct: 620 LRIVSGAEDRMIKIW 634
Score = 38 (18.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 1081 EIQELLYHPRPDEWPQGDRDATCE 1104
++Q+++ P P E+ + DA CE
Sbjct: 512 QVQQVV--PLPREFEFEEHDAECE 533
Score = 37 (18.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 362 ATGSGDHHVRVY 373
ATGS D VR+Y
Sbjct: 663 ATGSEDCEVRMY 674
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 177 (67.4 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 45/128 (35%), Positives = 63/128 (49%)
Query: 193 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 252
N RQ ++ GHL V V F +I +G D +K+W A GKL+ T G IS I
Sbjct: 165 NYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTI 224
Query: 253 AIDNRNILLAAGTVDKTIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 311
+ +A+G+ DKTIR+WN+ T A + +GH + + F P G N L S S
Sbjct: 225 SWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSP---KG-NMLVSGS 280
Query: 312 TDGCIGFW 319
D + W
Sbjct: 281 YDEAVFLW 288
Score = 158 (60.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 56/221 (25%), Positives = 94/221 (42%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + V+ + F G ++V+G+ D + LW R +++ +L S +S I + L
Sbjct: 258 IGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTL 317
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+A+ D +RIW+ T + LV ++ V F P NG Y+ + + D C+ W
Sbjct: 318 IASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSP---NG-KYVLAWTLDDCVRLW 373
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
Y + H ++ G +PG F +GS D + + D V
Sbjct: 374 DYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCW--DVVT 431
Query: 380 SPLGILEVEEHSDKVDSIQW-SHSHLRF-VSGSRDGTALIW 418
+ + +E H V + S RF VS DGT +W
Sbjct: 432 KKV-LQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVW 471
Score = 74 (31.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 35/148 (23%), Positives = 60/148 (40%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HSD V I S + DG IW Q CL + E N
Sbjct: 302 HSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQ----------CL---RTLVHEDNPP 348
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVL--------ESH 501
V+ V + + ++V+ A + +++WD G ++ +GH+N+ + L +S
Sbjct: 349 --VSSVKFSPNGKYVL-AWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSI 405
Query: 502 PFDS---RVLLSAGHDGLIIIWDILSSK 526
P + +S DG I+ WD+++ K
Sbjct: 406 PGRTPGYAFAVSGSEDGAILCWDVVTKK 433
Score = 60 (26.2 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLES-HPFDSRVLLSAGHDGLIIIWD 521
I WD ++Q ++ H V +++ + R ++S G DG + +W+
Sbjct: 424 ILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 38 (18.4 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G +A+ + D VR++ L L V E + V S+++S + ++ + D +
Sbjct: 315 GTLIASCATDGLVRIWDTS-TGQCLRTL-VHEDNPPVSSVKFSPNGKYVLAWTLDDCVRL 372
Query: 418 WYY 420
W Y
Sbjct: 373 WDY 375
Score = 37 (18.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 1077 VEPEEIQELLYHPRPDEWPQGDRD 1100
V PE E P P + P D+D
Sbjct: 474 VGPEREPEPEPEPEPGQCPDQDQD 497
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 35 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 94
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 95 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 150
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 151 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 198
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 199 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 258
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 259 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 311
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 312 NAHEHFVTSLDFH 324
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 193 (73.0 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 92/354 (25%), Positives = 158/354 (44%)
Query: 202 GHLSAVFCVLF-DKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S + C F +VTGA D ++W + TL+G + ++ +
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEV 200
Query: 261 LAAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEV--NGFN-YLASTSTDGCI 316
+A G++D TIR+W+ ++ + L GH IT +++ P+ + G LAS+S DG I
Sbjct: 201 IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTI 260
Query: 317 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
W +S+ + M N+ + C + GL L +GS D VRV+ ++
Sbjct: 261 KIWD-----TVSRVCQY--TMSGHT----NS-VSCVKWGGQGL-LYSGSHDRTVRVWDIN 307
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVS----GSRDGT-------ALIWYYK-C- 422
+ IL+ H+ V+ + S + LR + G + T AL Y K C
Sbjct: 308 SQGRCINILK--SHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICK 365
Query: 423 ----SQWRFIRL-DMNTC-----LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 472
S+ + D T L TK + T + V VA+ R++++A +F+
Sbjct: 366 KNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSA-SFDN 424
Query: 473 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 526
IK+WD +G + +GH V+ + + D R+L+S D + +WD+ + K
Sbjct: 425 SIKLWDGRDGKFISTFRGHVASVYQV-AWSSDCRLLVSCSKDTTLKVWDVRTRK 477
Score = 136 (52.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V V F G IV+ + D IKLW RDGK ++T RG + +A + LL
Sbjct: 400 GHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLL 459
Query: 262 AAGTVDKTIRIWNLQTLAPISV-LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ + D T+++W+++T +SV L GH+ + V++ V+G + S D + W
Sbjct: 460 VSCSKDTTLKVWDVRT-RKLSVDLPGHKDEVYTVDW---SVDG-KRVCSGGKDKMVRLWT 514
Query: 321 Y 321
+
Sbjct: 515 H 515
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 192 (72.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 89/385 (23%), Positives = 159/385 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKL 172
Query: 262 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 319
A+G + I +W+ T + L GH IT +++ PL N Y+AS+S DG + W
Sbjct: 173 ASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW 232
Query: 320 KY---KLDIDI-----SKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 362
+ + + S T + ++++ +R I+ AH +LC + G ++
Sbjct: 233 DTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 292
Query: 363 TG--SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL-------RFVSGSRDG 413
T S D+ +R + ++ + ++ ++ S +L R VSGS D
Sbjct: 293 TMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDF 352
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W + K + T + + V + R VI + +F+
Sbjct: 353 TLFLW---------------SPAEDKKPLARMTGHQALINQVVFSPDSR-VIASASFDKS 396
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 533
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 397 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQK------L 449
Query: 534 HNIVEGQGEGALFDGKWSPDGTTCA 558
+ G + ++ WSPDG A
Sbjct: 450 STDLPGHAD-EVYAVDWSPDGQRVA 473
Score = 153 (58.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + V+F VI + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 371 GHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 430
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 431 VSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 485
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 146 (56.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 48/172 (27%), Positives = 75/172 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ V +G+ D +LW L G ++ + + L
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A G+ DKT+R+W+ Q + + GH+G + ++F P NG YLAS D + W
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSP---NG-KYLASAGEDQRLKLW-- 495
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
D+ S T+F E +R I +FSP +A+ S D+ VRV+
Sbjct: 496 --DL-ASGTLFKE-------LRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 143 (55.4 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ F +++ ++D+ I+ W +G + + D+ I ++
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYF 399
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D+T R+W+ P+ + GH + V F P N NYLA+ STD + W
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHP---NS-NYLATGSTDKTVRLWSA 455
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
+ + +F P +L SFSP G +LA+ D ++++ +
Sbjct: 456 QQGNSVR--------LFTGHRGP----VLSLSFSPNGKYLASAGEDQRLKLWDL 497
Score = 126 (49.4 bits), Expect = 0.00043, P = 0.00043
Identities = 33/133 (24%), Positives = 63/133 (47%)
Query: 162 VKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVT 221
VK H N L + G + + + S + N + + GH V + F G+ + +
Sbjct: 432 VKFHPNSNYLAT----GSTDKTVRLWSAQQGNSVRLFT--GHRGPVLSLSFSPNGKYLAS 485
Query: 222 GADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPI 281
+D +KLW G L LRG + I+ +A + L+A+ ++D ++R+W++++
Sbjct: 486 AGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCN 545
Query: 282 SVLVGHQGIITGV 294
+ G G + GV
Sbjct: 546 TPADGSSGELVGV 558
Score = 102 (41.0 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 473 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 525
++K+WD +G L + L+GHT+ + L P DS ++ SA D + +WDI S+
Sbjct: 491 RLKLWDLASGTLFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRST 542
Score = 84 (34.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 86/354 (24%), Positives = 139/354 (39%)
Query: 107 SYDYIAR----QHGTSLLVPNSVKVHNTVNVLRSREY----SGPLSRSLMISSHKTSLLV 158
SY+Y+ R + T+L +V +H V + +Y SG SR+ S V
Sbjct: 171 SYNYLIRYLQSDNNTALCKVLAVHIHLDVQPAKRTDYQLYASGGSSRTENSSLEPPE--V 228
Query: 159 PNSVKVHNT-VNVLRS---REYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDK 214
P+ + + + VL+ R GP S I + + N Q +N +S+ D
Sbjct: 229 PSPILQNEAALEVLQESIKRVKDGPPS-LTTICFYAFYNTEQ-LLNTAEISS------DS 280
Query: 215 LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 274
+++ G D+ IKLW R KL + +D I LA T+++ +
Sbjct: 281 --KLLAAGFDNSCIKLWSLRSKKLKSEPHH---------VDTSRIRLACDTLEEEENEED 329
Query: 275 LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK-------------- 320
T + +L GH G + F + +G L S S D I +W
Sbjct: 330 -NTGTEMKILRGHCGPVYSTRFLA-DSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHA 384
Query: 321 YKL-DIDISK-TVF-----HEPVM----FNE----RIRPGN-AHILCSSFSPGGLFLATG 364
Y + D+DIS +++ H+ F+ RI G+ A + C F P +LATG
Sbjct: 385 YPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATG 444
Query: 365 SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
S D VR++ +S + H V S+ +S + S D +W
Sbjct: 445 STDKTVRLWSAQQGNS---VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495
Score = 81 (33.6 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 39/150 (26%), Positives = 60/150 (40%)
Query: 281 ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNE 340
+ +L GH G + F + +G L S S D I +W D+ F V++
Sbjct: 335 MKILRGHCGPVYSTRFLA-DSSG---LLSCSEDMSIRYW------DLGS--FTNTVLYQG 382
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS 400
P + SP L+ A+GS D R++ D PL I H VD +++
Sbjct: 383 HAYP----VWDVDISPFSLYFASGSHDRTARLWSFDRT-YPLRIYA--GHLADVDCVKFH 435
Query: 401 HSHLRFVSGSRDGTALIWYYKCSQWRFIRL 430
+ +GS D T +W Q +RL
Sbjct: 436 PNSNYLATGSTDKTVRLW--SAQQGNSVRL 463
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 188 (71.2 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DISTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDFKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 164 (62.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 50/165 (30%), Positives = 78/165 (47%)
Query: 159 PNSVKVHNTVNVLRSREYSGPL--SRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKL 215
P S ++ NV S SG S L+ ++ + S+L+ + L GH +FC F+
Sbjct: 12 PGSSQLVKRQNVGSSTARSGGYGESSALIQAAPRLSSLQAPLMELSGHSGEIFCAKFNSA 71
Query: 216 GEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 274
G+ I +G+ D I LWRA D + L G G I D+ + ++ + + D + W+
Sbjct: 72 GQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQWSRDSDIIFSASADMHLASWD 131
Query: 275 LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L T I VGH+ +I ++ + G L S S DG IG W
Sbjct: 132 LTTGERIRRYVGHEEVINSLD---ISKRGEEILFSGSDDGTIGIW 173
Score = 69 (29.3 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 36/172 (20%), Positives = 67/172 (38%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ S G + +G D+ ++V+ V + + H D + +++ S +S + D
Sbjct: 194 AISEAGNEIYSGGIDNDIKVWD---VRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAMD 250
Query: 413 GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMV--AWDASDRWVITAINF 470
TA W + F + H + T D I+ +V WD + V
Sbjct: 251 STARTWDIR----PFAPTER-----HIR-TFDGAPMGIEKNLVRGGWDKEGKRVAMGAA- 299
Query: 471 NFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+ + IW G L L GH V +E P ++LS D +++ ++
Sbjct: 300 DGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLVGEL 351
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH +F + G ++ +G +D + ++W R GK + L +I +A L
Sbjct: 305 GHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQL 364
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A + D T++IW+L+ ++ + H +++ V + VN F +A++ DGC+ W
Sbjct: 365 ATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRF--IATSGYDGCVKLWN- 421
Query: 322 KLDIDISKT-VFHE 334
L+ + K+ V HE
Sbjct: 422 PLNCSLIKSMVGHE 435
Score = 142 (55.0 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 66/328 (20%), Positives = 133/328 (40%)
Query: 109 DYIAR-QHGTSLLVPNSVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNT 167
D +AR Q L++ S++ N ++V + S + + + L+ + +++
Sbjct: 70 DALARRQRLQQLMIEKSLEGDNPLDV--DQGASENIEKETYVQGSHELLVARKKIALYSL 127
Query: 168 ----VNVLRSREYSG-PLSRFLMISSHKYSNLRQHYV---NLGHLSAVFCVLFDKLGEVI 219
+ + + RE S P+ ++ +L++ + +G + V F G
Sbjct: 128 EKAKLRLKKEREISEIPVPEIVLSGKSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHF 187
Query: 220 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIA---------IDNRNILLAAGTVDKTI 270
+G+ +K+W + + + RG + +S + D+ + LA G D T+
Sbjct: 188 ASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTV 247
Query: 271 RIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT 330
+W P+ L GH + V F P +G +YL S S D W +++
Sbjct: 248 CLWKASQSTPLLRLEGHLARVGRVAFHP---SG-DYLVSASFDTTWRLWDVHTGVELLMQ 303
Query: 331 VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEH 390
H +F+ I C P G +++G D R++ + S I+ ++EH
Sbjct: 304 EGHSEGIFS---------IACQ---PDGSLVSSGGNDAIGRIWDLRSGKS---IMVLDEH 348
Query: 391 SDKVDSIQWSHSHLRFVSGSRDGTALIW 418
++ ++ WS + + + S D T IW
Sbjct: 349 IRQIVAMAWSPNGYQLATSSADDTVKIW 376
Score = 122 (48.0 bits), Expect = 0.00081, P = 0.00081
Identities = 52/218 (23%), Positives = 90/218 (41%)
Query: 162 VKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAV-FCVLFDKLGE--V 218
V+ N N S + G + + + + R H + L C +D E
Sbjct: 178 VRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLT 237
Query: 219 IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 278
+ TGA D + LW+A L L G + +A L + + D T R+W++ T
Sbjct: 238 LATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTG 297
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG-FWKYKLDIDISKTVFHEPVM 337
+ + GH G+ + +G L S+ + IG W D+ K++ ++
Sbjct: 298 VELLMQEGHS---EGIFSIACQPDGS--LVSSGGNDAIGRIW----DLRSGKSI----MV 344
Query: 338 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
+E IR I+ ++SP G LAT S D V+++ +
Sbjct: 345 LDEHIR----QIVAMAWSPNGYQLATSSADDTVKIWDL 378
Score = 97 (39.2 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 32/137 (23%), Positives = 66/137 (48%)
Query: 384 ILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETS 443
I+ ++EH ++ ++ WS + + + S D T IW R + L +T H+ S
Sbjct: 342 IMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIW-----DLRKVSL-AHTIPAHSSLVS 395
Query: 444 DETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPF 503
D V + +R++ T+ ++ +K+W+ N L++ + GH +V ++ +
Sbjct: 396 D-------VRYIE-SGVNRFIATS-GYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDG--Y 444
Query: 504 DSRVLLSAGHDGLIIIW 520
R +S+G+D I +W
Sbjct: 445 GDR-FISSGYDRTIKLW 460
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 143 (55.4 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 54/176 (30%), Positives = 83/176 (47%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI-AID---NR 257
GH V+ V F LG VT + D +LW A D + LR +G I+D+ ++ N
Sbjct: 557 GHTQPVWDVKFSPLGHYFVTASHDQTARLW-ATDH--IYPLRIFAGHINDVDCVEFHPNS 613
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
N + G+ DKT R+W++ T + V +GH VN + +G +LAS DG I
Sbjct: 614 NYVFT-GSSDKTCRMWDVHTGNCVRVFLGHTN---SVNCLAVSPDG-RWLASGGEDGIIC 668
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
W DI + + + + + R A + +FS G L +G D+ VRV+
Sbjct: 669 VW----DIGSGRRL--KSMRGHAR-----ASLYSLAFSRDGTVLVSGCADNSVRVW 713
Score = 130 (50.8 bits), Expect = 0.00024, P = 0.00024
Identities = 57/226 (25%), Positives = 93/226 (41%)
Query: 209 CVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT---------------LRGCSGEISDIA 253
C+ F+ ++ G D IKLW + DGK L + L G SG + ++
Sbjct: 466 CIEFNDDSTLVAAGFQDSYIKLW-SLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVS 524
Query: 254 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 313
N L + + DKT+R+W+L T + GH + V F PL G +Y + S D
Sbjct: 525 FSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPL---G-HYFVTASHD 580
Query: 314 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH-ILCSSFSPGGLFLATGSGDHHVRV 372
W + ++ P+ RI G+ + + C F P ++ TGS D R+
Sbjct: 581 QTARLWA-------TDHIY--PL----RIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRM 627
Query: 373 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ + + L H++ V+ + S SG DG +W
Sbjct: 628 WDVHTGNCVRVFLG---HTNSVNCLAVSPDGRWLASGGEDGIICVW 670
Score = 129 (50.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V V + + +V T + + ++WD G+ V+V GHTN V L P D R L S
Sbjct: 604 VDCVEFHPNSNYVFTGSS-DKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSP-DGRWLASG 661
Query: 512 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT 555
G DG+I +WDI S ++ + G +L+ +S DGT
Sbjct: 662 GEDGIICVWDIGSGRRL------KSMRGHARASLYSLAFSRDGT 699
Score = 117 (46.2 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 52/193 (26%), Positives = 82/193 (42%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL--------------VG 286
T + ++ I ++ + L+AAG D I++W+L SVL +G
Sbjct: 456 TFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIG 515
Query: 287 HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 346
H G + GV+F P YL S S D + W LD + V + +P
Sbjct: 516 HSGPVYGVSFSPDN----KYLLSCSEDKTVRLWS--LD------TYTALVSYKGHTQP-- 561
Query: 347 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 406
+ FSP G + T S D R++ D + PL I H + VD +++ H + +
Sbjct: 562 --VWDVKFSPLGHYFVTASHDQTARLWATDHI-YPLRIFA--GHINDVDCVEF-HPNSNY 615
Query: 407 V-SGSRDGTALIW 418
V +GS D T +W
Sbjct: 616 VFTGSSDKTCRMW 628
Score = 46 (21.3 bits), Expect = 0.00094, Sum P(2) = 0.00093
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 354
K +D D++K V E + +E+I P N L F
Sbjct: 366 KLPIDPDVAKEVEAELKIKDEKIEPVNNKTLTKEF 400
>UNIPROTKB|B5FZ19 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:59729 "Taeniopygia guttata" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
HOVERGEN:HBG000900 OrthoDB:EOG4HX519 EMBL:DQ214273 EMBL:DQ214274
EMBL:DQ214277 EMBL:DQ214278 EMBL:DQ214279 EMBL:DQ214280
RefSeq:NP_001157823.1 UniGene:Tgu.2619 ProteinModelPortal:B5FZ19
STRING:B5FZ19 PRIDE:B5FZ19 GeneID:100190672 KEGG:tgu:100190672
Uniprot:B5FZ19
Length = 325
Score = 184 (69.8 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 72/324 (22%), Positives = 147/324 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D R++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYNGHTGAVWCVDADWDTRHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T ++++ + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALVKTSSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M +I ++ I + + P G F+ G + + +
Sbjct: 120 CFVSFFDLRDPSQIENNEPYM---KIPCSDSKITSAVWGPLGEFIIAGHENGELNQFSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ + ++EH+ +++ IQ S F++ S+D TA + + C+ + ++ T
Sbjct: 177 SGEQ---LSNIKEHTKQINDIQTSRDMTMFITASKDNTAKL--FDCTSLKHLKT-FRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + V +A D + F+ + + AF + +V KGH +
Sbjct: 231 PVNSAALSPIFDHV-VLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 186 (70.5 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 74/313 (23%), Positives = 141/313 (45%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S + D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSAARDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 187 (70.9 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 88/385 (22%), Positives = 157/385 (40%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKL 171
Query: 262 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 319
A+G + I +W+ T + L GH IT +++ PL N Y+AS+S DG + W
Sbjct: 172 ASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW 231
Query: 320 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 362
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 291
Query: 363 TG--SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL-------RFVSGSRDG 413
T S D+ +R + ++ + ++ ++ S +L R VSGS D
Sbjct: 292 TMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDF 351
Query: 414 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
T +W + K + T + + V + R +I + +F+
Sbjct: 352 TLFLW---------------SPAEDKKPLARMTGHQALINQVLFSPDSR-IIASASFDKS 395
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 533
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 396 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQKLAAD--- 451
Query: 534 HNIVEGQGEGALFDGKWSPDGTTCA 558
+ G + ++ WSPDG A
Sbjct: 452 ---LPGHAD-EVYAVDWSPDGQRVA 472
Score = 156 (60.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + VLF +I + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 370 GHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 430 VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 484
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 190 (71.9 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 101/437 (23%), Positives = 192/437 (43%)
Query: 118 SLLVPNSVKVHNTVNVLR-SREYSGPLSRSLMISSHKTSLLVPNSV--KVHNTVNVLRSR 174
SL + N ++ + +N L S+ ++ + +S S K L+ N V K N++N+ S+
Sbjct: 283 SLKIFNYLQFEDIINSLGVSQNWNKIIRKST--SLWKKLLISENFVSPKGFNSLNLKLSQ 340
Query: 175 EYSGPLSR-------FL---MISSHKYSN--LRQHYVNLGHLSAVF-CVLFDKLGEVIVT 221
+Y LS+ FL I + Y+ + Q GH+++V C+ F+ ++T
Sbjct: 341 KYP-KLSQQDRLRLSFLENIFILKNWYNPKFVPQRTTLRGHMTSVITCLQFED--NYVIT 397
Query: 222 GADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPI 281
GADD +I+++ + + K L L G G + + + IL++ G+ D+T+R+W+++
Sbjct: 398 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVS-GSTDRTVRVWDIKKGCCT 456
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK--------TVFH 333
V GH + ++ +E Y+ + S D + WK + + VFH
Sbjct: 457 HVFKGHNSTVRCLDI--VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 514
Query: 334 EPVMFNERIRPGNAHILC-SSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD 392
P + H+ + S G + +GS D+ + V+ + + L IL H+D
Sbjct: 515 TPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKC-LYILS--GHTD 571
Query: 393 KVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM--NTCLPHTKETSDETNKKI 450
++ S + H R +S S D T IW + + W N+ P K +
Sbjct: 572 RIYSTIYDHERKRCISASMDTTIRIWDLE-NIWNNGECSYATNSASPCAKILGAMYTLQG 630
Query: 451 KVTMVAW-DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 509
+V SD+++++A + I+ WDA D + H + + + +L+
Sbjct: 631 HTALVGLLRLSDKFLVSAAA-DGSIRGWDA--NDYSRKFSYHHTNLSAITTFYVSDNILV 687
Query: 510 SAGHDGLIIIWDILSSK 526
S G + I+++ S K
Sbjct: 688 S-GSENQFNIYNLRSGK 703
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 188 (71.2 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 61/225 (27%), Positives = 108/225 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH ++ + F G I +G+ D ++LW +GKL+ TL G ++ +A+ + +
Sbjct: 356 GHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDGLYV 414
Query: 262 AAGTVDKTIRIWNLQTLAPISVLV---GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
AAG++DKT+R+W+ T + L GH+ + V F P NG L S S D I
Sbjct: 415 AAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAP---NG-KELVSGSLDKTIKL 470
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAH---ILCSSFSPGGLFLATGSGDHHVRVYKM 375
W ++++ + ++ + R H +L +P G ++ +GS D V+ +
Sbjct: 471 W----ELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFW-- 524
Query: 376 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYY 420
D + ++ ++ H + V S+ S + F +GS D A IW Y
Sbjct: 525 DPITGNAQMM-LQGHKNSVISVAPSPTGNLFATGSGDMRARIWRY 568
Score = 167 (63.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 68/231 (29%), Positives = 105/231 (45%)
Query: 200 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG----CSGE--ISDIA 253
+L H S V CV F + G+ + TG + +++ G+ +A L+ SG+ I +
Sbjct: 265 HLVHDSVVCCVRFSRDGKYLATGCNRSA-QIFDVTLGQNVAVLQDESVDKSGDLYIRSVC 323
Query: 254 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 313
LA G DK IR+W++ T + GH+ I ++F NG Y+AS S D
Sbjct: 324 FSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAG---NG-RYIASGSGD 379
Query: 314 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV- 372
+ W DI K V+ I G + + SP GL++A GS D VRV
Sbjct: 380 KTVRLW----DIAEGKLVY------TLSIEDG---VTTVAMSPDGLYVAAGSLDKTVRVW 426
Query: 373 -----YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
Y ++ +++P G H D V S+ ++ + VSGS D T +W
Sbjct: 427 DTTTGYLVERLENPDG------HKDSVYSVAFAPNGKELVSGSLDKTIKLW 471
>UNIPROTKB|H9L227 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR000772
PROSITE:PS50231 GeneTree:ENSGT00700000104487 EMBL:AADN02059449
EMBL:AADN02059450 Ensembl:ENSGALT00000035741 Uniprot:H9L227
Length = 219
Score = 164 (62.8 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 49/197 (24%), Positives = 97/197 (49%)
Query: 180 LSRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 238
LS++ ++SH + H ++ G L+ C +++ GAD +I ++ + ++
Sbjct: 20 LSKYRQVASH----VGLHSASIPGILALDLCP--SDTNKILTGGADKNVIVFDKSSE-QI 72
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
LATL+G S +++ + L+ + + D TIRIW++ + + V+ H+G +TG++
Sbjct: 73 LATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLS--- 129
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 358
L G +YL S+S D +W + DI + V+ + C+ F P G
Sbjct: 130 LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLTKVTDESSGCALTCAQFHPDG 178
Query: 359 LFLATGSGDHHVRVYKM 375
L TG+ D ++++ +
Sbjct: 179 LIFGTGTMDSQIKIWDL 195
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 185 (70.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 96/383 (25%), Positives = 160/383 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV F G+ V+ D +++W TL+G + + +A + +
Sbjct: 138 GHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKI 197
Query: 262 AAGTVDKTIRIWNLQTLAPI-SVLVGHQGIITGVNFCPLEVNGFNY-LASTSTDGCIGFW 319
A ++ IRIW QT + S L GH ITG+++ P +N LAS+S D I W
Sbjct: 198 ATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIW 257
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
D + K + + + C + GL + +GS D VRV+ D
Sbjct: 258 ----DTESCKNLMS--------LSGHTMSVTCLKWGGEGL-IYSGSQDRTVRVFNT--TD 302
Query: 380 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT-------------ALIWY--YKC-S 423
L + ++ H+ V+++ + ++ +GS D T AL Y K S
Sbjct: 303 GRL-VRVLDGHAHWVNTLALNTDYV-LRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKS 360
Query: 424 QWRFIRL----DMNTCL--PHTKETSDE--TNKKIKVTMVAWDASDRWVITAINFNFQIK 475
+ I + D + P +TS T + + +V++ R+ +A +F+ IK
Sbjct: 361 KGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASA-SFDKSIK 419
Query: 476 IWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHN 535
+WD +G + +GH V+ + DSR L+S D + IWDI + K
Sbjct: 420 LWDGQSGKFLGNFRGHVGAVYQV-CWSSDSRYLVSGSKDSTLKIWDIKTKKME------K 472
Query: 536 IVEGQGEGALFDGKWSPDGTTCA 558
+ G + ++ WSPDG A
Sbjct: 473 ELPGHAD-EVYTVDWSPDGDRVA 494
Score = 134 (52.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V F G + + D IKLW + GK L RG G + + + + L
Sbjct: 392 GHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYL 451
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+G+ D T++IW+++T L GH + V++ P +G + +AS S D + W
Sbjct: 452 VSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSP---DG-DRVASGSKDRLLRIW 505
>UNIPROTKB|E1C6T8 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 KO:K03246 CTD:8668
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:AADN02043770
IPI:IPI00580489 RefSeq:NP_001157867.1 UniGene:Gga.7902
ProteinModelPortal:E1C6T8 PRIDE:E1C6T8 Ensembl:ENSGALT00000005281
GeneID:419653 KEGG:gga:419653 NextBio:20822680 Uniprot:E1C6T8
Length = 325
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 72/324 (22%), Positives = 145/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D R++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYNGHTGAVWCVDADWDTRHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T ++++ + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALVKTSSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M +I ++ I + + P G F+ G + +
Sbjct: 120 CFVSFFDLRDPSQIENNEPYM---KIPCSDSKITSAVWGPLGEFIIAGHESGELNQFSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ + ++EH+ +++ IQ S F++ S+D TA + + C+ ++ T
Sbjct: 177 SGEQ---LSNIKEHTKQINDIQTSRDMTMFITASKDNTAKL--FDCTTLEHLKT-FRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + V +A D + F+ + + AF + +V KGH +
Sbjct: 231 PVNSAALSPIFDHV-VLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 152 (58.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V V F G +I + D KLW ARDGK + TLRG + + + L
Sbjct: 410 IGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRL 469
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
L + D T+++WN++T + L GH+ + GV++ P +G + S D + W+
Sbjct: 470 LVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSP---DG-QRVGSGGRDKAVRLWR 525
Score = 135 (52.6 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 344 PGNAH-ILCSSFSPGGLF-LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH 401
PG+ ILC+ FSP LATGSGD+ R++ + +P L+ H+ V + WS
Sbjct: 149 PGHGEPILCAQFSPASSARLATGSGDNTARIWDAE-TGTPKHTLK--GHAGWVLGVSWSP 205
Query: 402 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK-VTMVAWDAS 460
R + S D T IW D T K+ E K V +AW+
Sbjct: 206 DGTRLATCSMDKTVRIW------------DPET----GKQVGSELKGHAKWVQGIAWEPL 249
Query: 461 DRWV-----ITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR-VLLSAGHD 514
W + + + +F +IW G VL GH V + + V+ +A HD
Sbjct: 250 HLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHD 309
Query: 515 GLIIIWD 521
+ +WD
Sbjct: 310 KTVKVWD 316
Score = 134 (52.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 202 GHLSAVFCVLFDKLGEV-IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH + C F + TG+ D ++W A G TL+G +G + ++
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR 209
Query: 261 LAAGTVDKTIRIWNLQTLAPI-SVLVGHQGIITGVNFCPLEV--NGFNYLASTSTDGCIG 317
LA ++DKT+RIW+ +T + S L GH + G+ + PL + +G L S S D
Sbjct: 210 LATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTAR 269
Query: 318 FW 319
W
Sbjct: 270 IW 271
Score = 102 (41.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 26/94 (27%), Positives = 47/94 (50%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
D +I + ++ K+W+A +G + L+GH V+ S DSR+L++A D + +W
Sbjct: 424 DGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQC-SFSADSRLLVTASKDTTLKVW 482
Query: 521 DILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDG 554
++ + K + G E ++ WSPDG
Sbjct: 483 NVRTGK------LATDLPGH-EDEVYGVDWSPDG 509
Score = 89 (36.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 32/125 (25%), Positives = 56/125 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT-LRGCSGEISDIAIDNRNIL 260
GH V V + G + T + D +++W GK + + L+G + + IA + ++
Sbjct: 193 GHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLW 252
Query: 261 ------LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 314
L + + D T RIW + T VL GH+G ++ V + NG + + S D
Sbjct: 253 RDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGA--GNGTGVVYTASHDK 310
Query: 315 CIGFW 319
+ W
Sbjct: 311 TVKVW 315
Score = 84 (34.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V ++ A R ++TA + +K+W+ G L L GH +EV+ ++ P RV S
Sbjct: 458 VYQCSFSADSRLLVTASK-DTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVG-SG 515
Query: 512 GHDGLIIIW 520
G D + +W
Sbjct: 516 GRDKAVRLW 524
Score = 73 (30.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 23/81 (28%), Positives = 34/81 (41%)
Query: 338 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSI 397
F +R A + SFS L T S D ++V+ + L ++ H D+V +
Sbjct: 447 FINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVR--TGKLAT-DLPGHEDEVYGV 503
Query: 398 QWSHSHLRFVSGSRDGTALIW 418
WS R SG RD +W
Sbjct: 504 DWSPDGQRVGSGGRDKAVRLW 524
Score = 70 (29.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 195 RQHYVNLGHLSAVFCVLFDKLGE---VIVTGADDLLIKLWRARDGKLLATLRGCSGEISD 251
R +V GH +V CV + G V+ T + D +K+W A G LL L+ + ++
Sbjct: 277 RTEHVLSGHKGSVSCVRWGA-GNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSHAHWVNH 335
Query: 252 IAIDNRNILLAAGTVDKT 269
+A+ + + G D T
Sbjct: 336 LALST-DFVCRTGFFDHT 352
Score = 50 (22.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+FSP G +A+ D+ +++ + D I + H V +S V+ S+D
Sbjct: 420 TFSPDGSMIASAGWDNATKLW--NARDGKF-INTLRGHVAPVYQCSFSADSRLLVTASKD 476
Query: 413 GTALIW 418
T +W
Sbjct: 477 TTLKVW 482
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 182 (69.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 76/313 (24%), Positives = 137/313 (43%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + ++V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
+ W+ + H + +RP G LA+ S D VRV+ +
Sbjct: 216 MKMWEVATGYCVKTFTGHREWV--RMVRPNQ----------DGTLLASCSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + +H + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++T CL T D V V + R+V++ + + ++IWD N ++ L
Sbjct: 324 DISTGMCLM-TLVGHDNW-----VRGVLFHPGGRFVVSCAD-DKTLRIWDYKNKRCMKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 SAHEHFVTSLDFH 389
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 74/313 (23%), Positives = 136/313 (43%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ Y GH S V V+F + VIV+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFD 159
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
I W+ + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVATGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASSSNDQTVRVWVV 263
Query: 376 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 430
+ + E E + + + + +H + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 431 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 488
D++ CL T D + + V +++++ + + ++IWD N + L
Sbjct: 324 DVSIGMCLM-TLVGHDNWVRGVLV-----HPGGKYIVSCAD-DKTLRIWDYKNKRCTKTL 376
Query: 489 KGHTNEVFVLESH 501
H + V L+ H
Sbjct: 377 SAHEHFVTSLDFH 389
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 73/327 (22%), Positives = 143/327 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH +++ V+F + ++V+ ++D I++W G+ +L+G + + D+A D + LL
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 262 AAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
A+ + D +I++W+ Q + I + GH ++ V F P G +Y+ S S D I W+
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPA---G-DYVLSASRDRTIKMWE 221
Query: 321 YKLDIDISKTVFHEPVMFNERIR-PGNAHILCSSFSPGGLFLATGSGDHHVRV----YKM 375
+ H + R+ G+ CS+ ++L T S D V + + +
Sbjct: 222 VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWL-TNSKDCKVELRDHEHTV 280
Query: 376 DGVD-SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNT 434
+ + +P + D+ + H SGSRD T IW + +
Sbjct: 281 ECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIW----------DVSVGL 330
Query: 435 CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNE 494
CL T D V +A+ +++++A + + I++WD N ++ L H +
Sbjct: 331 CLL-TLSGHDNW-----VRGLAFHPGGKYLVSASD-DKTIRVWDLRNKRCMKTLYAHQHF 383
Query: 495 VFVLESHPFDSRVLLSAGHDGLIIIWD 521
++ H V+ S D + +W+
Sbjct: 384 CTSIDFHKAHPYVI-SGSVDQTVKVWE 409
Score = 140 (54.3 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 71/291 (24%), Positives = 116/291 (39%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
+L G I+ + L+ + + D TIRIW+ +T L GH + V F +
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAF---D 159
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS-SFSPGGL 359
G LAS S D I W ++ + KT+ H G+ H + S +F P G
Sbjct: 160 AQG-KLLASCSADLSIKLWDFQQSYECIKTM-H-----------GHDHNVSSVAFVPAGD 206
Query: 360 FLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWY 419
++ + S D R KM V + + H + V ++ F + S D T +W
Sbjct: 207 YVLSASRD---RTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWL 263
Query: 420 YKCSQWRF-IRLDMNT--CLPHTKETSDET-NKKIKVTMVAWDASDRWVITAINFNFQIK 475
+ +R +T C+ E + N+ ++ + + I+
Sbjct: 264 TNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSR-DKTIR 322
Query: 476 IWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 526
IWD G + L GH N V L HP + L+SA D I +WD+ + +
Sbjct: 323 IWDVSVGLCLLTLSGHDNWVRGLAFHP-GGKYLVSASDDKTIRVWDLRNKR 372
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 180 (68.4 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 82/343 (23%), Positives = 143/343 (41%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+ ++ GH + + V F ++V+ ++D IK+W G+ TL+G + + DI D
Sbjct: 98 EKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFD 157
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
LLA+ + D TI++W+ QT + L GH ++ V F P +G + L S+S D
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTP---SG-DQLISSSRDKT 213
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERI-RPGNAHILCSSFSP-------GGLFLATGSGD 367
I W+ I V HE + + G+ CS+ G LAT
Sbjct: 214 IKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREH 273
Query: 368 HHV---RVYKMDGV-DSPLGILEVEEHSDKVDSIQWSH--SHLRFVS-GSRDGTALIWYY 420
HV + + D P +L E KV + +++ GSRD T IW
Sbjct: 274 SHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIW-- 331
Query: 421 KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 480
L CL T D V V + +++++ + + I++WD
Sbjct: 332 --------ELATGRCLA-TYIGHDNW-----VRAVRFHPCGKFLLS-VGDDKTIRVWDIA 376
Query: 481 NGDLVQVL-KGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
G ++ + + HT+ + L+ + + + G D +I +W +
Sbjct: 377 QGRCIKTINEAHTHFISCLDFCLHNPHIA-TGGVDDVIKVWKL 418
Score = 143 (55.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 76/309 (24%), Positives = 124/309 (40%)
Query: 232 RARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGII 291
R + +L R C I+ + L+ + + D TI++W+ ++ L GH +
Sbjct: 95 RPPEKHILTGHRNC---INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 292 TGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH-IL 350
++F + G N LAS S D I W ++ D KT+ H G+ H +
Sbjct: 152 QDIDF---DKTG-NLLASCSADLTIKLWDFQT-YDCVKTL-H-----------GHDHNVS 194
Query: 351 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS 410
C F+P G L + S D ++V++ + I + H D V I S S S
Sbjct: 195 CVRFTPSGDQLISSSRDKTIKVWE---AATGYCIKTLVGHEDWVRKITVSEDGSCIASCS 251
Query: 411 RDGTALIWYY---KC-SQWR----FIR-LDMNTC----LPHTKETSDETNKKIKVTMVAW 457
D T W +C + +R + L +T +P + ++ E K+K
Sbjct: 252 NDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGN 311
Query: 458 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 517
+ + + IKIW+ G + GH N V + HP + LLS G D I
Sbjct: 312 LVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPC-GKFLLSVGDDKTI 370
Query: 518 IIWDILSSK 526
+WDI +
Sbjct: 371 RVWDIAQGR 379
>ASPGD|ASPL0000040628 [details] [associations]
symbol:AN2997 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016282
"eukaryotic 43S preinitiation complex" evidence=IEA] [GO:0071541
"eukaryotic translation initiation factor 3 complex, eIF3m"
evidence=IEA] [GO:0034399 "nuclear periphery" evidence=IEA]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0003743 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
OMA:ATVAGWS RefSeq:XP_660601.1 ProteinModelPortal:Q5B8Y3
STRING:Q5B8Y3 EnsemblFungi:CADANIAT00010083 GeneID:2874320
KEGG:ani:AN2997.2 OrthoDB:EOG44QX8Q Uniprot:Q5B8Y3
Length = 336
Score = 176 (67.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 74/319 (23%), Positives = 137/319 (42%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH ++ + F++ G+++ + A D ++ W + +G+ L T G G I + + +LL
Sbjct: 8 GHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYSGHLGAIWTVDVSPNTVLL 67
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD-GCIGFWK 320
A G+ D ++R+WN++T + V + V F P +G LA T G +G
Sbjct: 68 ATGSADNSVRLWNVKTGECVKVWE-FPTAVKRVEFSP---DGSKVLAVTEKRMGFLGTIA 123
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
LDI+ ++ + RI + + +S G ++ G D V Y
Sbjct: 124 V-LDINYDGDFTNQAEEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSVSQYDAK-TGE 181
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK 440
L ++ E +++ +Q+S F++ S+D +A K R + + + T + T
Sbjct: 182 QLENVQAHEFDHQINDLQFSPDRTHFLTASKDKSA-----KLMSSRNLAI-LKTYVADTP 235
Query: 441 ETSDE-TNKKIKVTMVAWDAS-DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVL 498
S T KK V + A+ D +A F+ + + D + +KGH + +
Sbjct: 236 LNSAAITPKKEYVILGGGQAAMDVTTTSARQGKFEARFYHKVFEDEIGRVKGHFGPLNTI 295
Query: 499 ESHPFDSRVLLSAGHDGLI 517
HP + S G DG +
Sbjct: 296 HVHPAGT-AYASGGEDGYV 313
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 180 (68.4 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 87/372 (23%), Positives = 155/372 (41%)
Query: 202 GHLSAVFCVLFDKLGE-VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH A+ F + +V+G+ D ++W G L TL+G + + ++ +
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAM 205
Query: 261 LAAGTVDKTIRIWNLQTLAPISV-LVGHQGIITGVNFCP--LEVNGFNYLASTSTDGCIG 317
+A G++D T+RIW+ + + L GH IT + + P L+ +G LAS S D +
Sbjct: 206 IATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVR 265
Query: 318 FWKY---KLDIDISKTVFHEPVMFNERIRPGNAHILCSSF--------SPGGLFLATGSG 366
W + DI +S H+ + R G I SS S G + T S
Sbjct: 266 IWDVISKRADIVLSG---HKGSVTCVRWG-GTGKIYTSSHDRTIKVWNSQTGTLIQTLSA 321
Query: 367 DHHVRVYKMD-GVDSPLGILEVEEHSDKV---DSIQWSHSHLRFVSGSRDGTALIWYYKC 422
H RV + D L +H+ KV D+ + + + RF + ++
Sbjct: 322 HAH-RVNHLALSTDFILRTA-YHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKLVS 379
Query: 423 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG 482
+ F + +K + + +V V + + D I + F+ +K+W+ +G
Sbjct: 380 ASDDFTMYLWDP-ESSSKPVARLLGHQKEVNHVTF-SPDMAYIASAGFDNHVKLWNGRDG 437
Query: 483 DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGE 542
+ L+GH V+ DSR+L+S+ D + +W++ + K + G +
Sbjct: 438 KFITTLRGHVGAVYQC-CFSADSRLLVSSSKDTTLKVWNVRTGK------LSEDLPGHKD 490
Query: 543 GALFDGKWSPDG 554
+F WSPDG
Sbjct: 491 -EVFAVDWSPDG 501
Score = 141 (54.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
LGH V V F I + D +KLW RDGK + TLRG G + + L
Sbjct: 402 LGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRL 461
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
L + + D T+++WN++T L GH+ + V++ P +G + S D I W+
Sbjct: 462 LVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSP---DG-QKVGSGGKDKAIRIWR 517
>UNIPROTKB|Q5IH81 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9986 "Oryctolagus cuniculus" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900
OrthoDB:EOG4HX519 EMBL:AY727926 RefSeq:NP_001075647.1
UniGene:Ocu.6213 ProteinModelPortal:Q5IH81 STRING:Q5IH81
PRIDE:Q5IH81 GeneID:100008959 Uniprot:Q5IH81
Length = 333
Score = 175 (66.7 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 75/325 (23%), Positives = 147/325 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYM---KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW-YYKCSQWRFIRLDMNTC 435
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + R +
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSREMTMFVTASKDNTAKLFDSTTLEHQKTFRTE---- 229
Query: 436 LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNE 494
P + + N + V +A D + F+ + + AF + +V KGH
Sbjct: 230 -PPRELAALSPNYEHVVVGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGP 287
Query: 495 VFVLESHPFDSRVLLSAGHDGLIII 519
+ + HP D + S G DG + I
Sbjct: 288 INSVAFHP-DGKSYSSGGEDGYVRI 311
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 179 (68.1 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 86/316 (27%), Positives = 136/316 (43%)
Query: 200 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL------------RGCSG 247
+L H S V CV F + G+ I TG + +++ G+L+A L SG
Sbjct: 196 SLDHSSVVCCVRFSRDGKFIATGCNKTT-QVFNVTTGELVAKLIDESSNENKDDNTTASG 254
Query: 248 E--ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
+ I + LLA G DK IRIW+L T I +L GH+ I ++F P +G +
Sbjct: 255 DLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFP---DG-D 310
Query: 306 YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS 365
L S S D + W + S T+ I G + + SP G +A GS
Sbjct: 311 RLVSGSGDRSVRIWDLRTS-QCSLTL---------SIEDG---VTTVAVSPDGKLIAAGS 357
Query: 366 GDHHVRVYK------MDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWY 419
D VRV+ ++ +DS G H D V S+ +S++ + SGS D T +W+
Sbjct: 358 LDRTVRVWDSTTGFLVERLDS--GNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Query: 420 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDA 479
+ + +TC E + +K V V + ++++ I WD
Sbjct: 416 LEGKSDK-----KSTC-----EVTYIGHKDF-VLSVCCTPDNEYILSGSKDRGVI-FWDQ 463
Query: 480 FNGDLVQVLKGHTNEV 495
+G+ + +L+GH N V
Sbjct: 464 ASGNPLLMLQGHRNSV 479
Score = 136 (52.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 57/229 (24%), Positives = 100/229 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH ++ + F G+ +V+G+ D +++W R + TL G ++ +A+ L+
Sbjct: 295 GHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLI 353
Query: 262 AAGTVDKTIRIWNLQTLAPISVLV-------GHQGIITGVNFCPLEVNGFNYLASTSTDG 314
AAG++D+T+R+W+ T + L GH+ + V F NG +AS S D
Sbjct: 354 AAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN---NG-EQIASGSLDR 409
Query: 315 CIGFWKYKLDIDISKT-----VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 369
+ W + D T + H+ + + P N +IL S G +F SG+
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP- 468
Query: 370 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ + G + + + V +S + I F +GS D A IW
Sbjct: 469 --LLMLQGHRNSVISVAVSLNSKGTEGI--------FATGSGDCKARIW 507
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 179 (68.1 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 86/316 (27%), Positives = 136/316 (43%)
Query: 200 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL------------RGCSG 247
+L H S V CV F + G+ I TG + +++ G+L+A L SG
Sbjct: 196 SLDHSSVVCCVRFSRDGKFIATGCNKTT-QVFNVTTGELVAKLIDESSNENKDDNTTASG 254
Query: 248 E--ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
+ I + LLA G DK IRIW+L T I +L GH+ I ++F P +G +
Sbjct: 255 DLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFP---DG-D 310
Query: 306 YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS 365
L S S D + W + S T+ I G + + SP G +A GS
Sbjct: 311 RLVSGSGDRSVRIWDLRTS-QCSLTL---------SIEDG---VTTVAVSPDGKLIAAGS 357
Query: 366 GDHHVRVYK------MDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWY 419
D VRV+ ++ +DS G H D V S+ +S++ + SGS D T +W+
Sbjct: 358 LDRTVRVWDSTTGFLVERLDS--GNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Query: 420 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDA 479
+ + +TC E + +K V V + ++++ I WD
Sbjct: 416 LEGKSDK-----KSTC-----EVTYIGHKDF-VLSVCCTPDNEYILSGSKDRGVI-FWDQ 463
Query: 480 FNGDLVQVLKGHTNEV 495
+G+ + +L+GH N V
Sbjct: 464 ASGNPLLMLQGHRNSV 479
Score = 136 (52.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 57/229 (24%), Positives = 100/229 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH ++ + F G+ +V+G+ D +++W R + TL G ++ +A+ L+
Sbjct: 295 GHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLI 353
Query: 262 AAGTVDKTIRIWNLQTLAPISVLV-------GHQGIITGVNFCPLEVNGFNYLASTSTDG 314
AAG++D+T+R+W+ T + L GH+ + V F NG +AS S D
Sbjct: 354 AAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN---NG-EQIASGSLDR 409
Query: 315 CIGFWKYKLDIDISKT-----VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 369
+ W + D T + H+ + + P N +IL S G +F SG+
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP- 468
Query: 370 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ + G + + + V +S + I F +GS D A IW
Sbjct: 469 --LLMLQGHRNSVISVAVSLNSKGTEGI--------FATGSGDCKARIW 507
>UNIPROTKB|Q5E966 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9913 "Bos taurus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743
GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
EMBL:BT021054 EMBL:BC103177 IPI:IPI00692672 RefSeq:NP_001015628.1
UniGene:Bt.37139 ProteinModelPortal:Q5E966 STRING:Q5E966
PRIDE:Q5E966 Ensembl:ENSBTAT00000019134 GeneID:521747
KEGG:bta:521747 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 InParanoid:Q5E966 OMA:ATVAGWS OrthoDB:EOG4HX519
NextBio:20873359 Uniprot:Q5E966
Length = 325
Score = 174 (66.3 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 76/324 (23%), Positives = 145/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M RI ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYM---RIPCNDSKITSAVWGPLGECIIAGHEGGELNQYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 131 (51.2 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 250
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 232 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VL 288
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 307
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 289 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 340
Query: 308 ASTSTDGCIGFW 319
S S D I W
Sbjct: 341 VSASGDRTIKVW 352
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 322 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 377
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 378 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 415
Score = 113 (44.8 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 207 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 262
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 263 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 316
Query: 327 IS 328
I+
Sbjct: 317 IT 318
Score = 98 (39.6 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 377 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 432
Query: 521 DILSS 525
D++++
Sbjct: 433 DLIAA 437
>UNIPROTKB|F1PPR0 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006413 "translational initiation"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 GeneTree:ENSGT00630000089849
OMA:ATVAGWS EMBL:AAEX03001657 Ensembl:ENSCAFT00000017014
Uniprot:F1PPR0
Length = 325
Score = 173 (66.0 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 76/324 (23%), Positives = 145/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G SG + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHSGAVWCVDADWDTKHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYM---KIPCNDSKITSAVWGPLGECIIAGHEGGELNQYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 130 (50.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 250
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 232 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VL 288
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 307
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 289 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 340
Query: 308 ASTSTDGCIGFW 319
S S D I W
Sbjct: 341 VSASGDRTIKVW 352
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 322 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 377
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F + S + DG I
Sbjct: 378 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI------VSGAYDGKIKV 431
Query: 319 WKYKLDID 326
W +D
Sbjct: 432 WDLMAALD 439
Score = 108 (43.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 207 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 262
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
D T+R+W++ ++ L+ H + + F NG + + S D I W D
Sbjct: 263 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 316
Query: 327 IS 328
I+
Sbjct: 317 IT 318
Score = 98 (39.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 377 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 432
Query: 521 DILSS 525
D++++
Sbjct: 433 DLMAA 437
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 178 (67.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 60/229 (26%), Positives = 105/229 (45%)
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISD 251
S + YV GH ++ + F G IV+G+ D +LW G+ + L +G ++
Sbjct: 390 STQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTA 448
Query: 252 IAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 310
IAI + +A G++D+ IR+W++ TL + L GH+ + + F P + L S
Sbjct: 449 IAISPNDQFIAVGSLDQIIRVWSVSGTL--VERLEGHKESVYSIAFSP----DSSILLSG 502
Query: 311 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS-SFSPGGLFLATGSGDHH 369
S D I W+ + + + +P + G+ + S + SP + +GS D
Sbjct: 503 SLDKTIKVWELQATRSVGLSAI-KPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRS 561
Query: 370 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
++ + + S L + H + V S+ +S +F SGS D A IW
Sbjct: 562 MQFWDLQTGQS---YLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Score = 124 (48.7 bits), Expect = 0.00074, P = 0.00074
Identities = 45/170 (26%), Positives = 70/170 (41%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ SP F+A GS D +RV+ + G L + +E H + V SI +S +SGS D
Sbjct: 450 AISPNDQFIAVGSLDQIIRVWSVSGT---L-VERLEGHKESVYSIAFSPDSSILLSGSLD 505
Query: 413 GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 472
T +W + ++ + ++ P + T V VA RW ++ +
Sbjct: 506 KTIKVWELQATR----SVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSK-DR 560
Query: 473 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
++ WD G +GH N V + P D R S D IW I
Sbjct: 561 SMQFWDLQTGQSYLTCQGHKNSVISVCFSP-DGRQFASGSGDLRARIWSI 609
>RGD|1560498 [details] [associations]
symbol:Eif3i-ps1 "eukaryotic translation initiation factor 3,
subunit I, pseudogene 1" species:10116 "Rattus norvegicus"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
KO:K03246 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900
OrthoDB:EOG4HX519 EMBL:BC158748 EMBL:BC158821 IPI:IPI00766018
RefSeq:NP_001108507.1 UniGene:Rn.162577 ProteinModelPortal:B0BNA7
STRING:B0BNA7 PhosphoSite:B0BNA7 PRIDE:B0BNA7 GeneID:682390
KEGG:rno:682390 RGD:728910 NextBio:722902 ArrayExpress:B0BNA7
Genevestigator:B0BNA7 Uniprot:B0BNA7
Length = 325
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYM---KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTSLEHQ---KTFRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 177 (67.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 63/226 (27%), Positives = 105/226 (46%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNR 257
GH ++ + + G IV+G+ D K+W GK TL G ++ +A+
Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
L+AAG++D +R+W+ QT + GH + V F P +G + LAS S D +
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSP---DGKS-LASGSLDKSLK 482
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG 377
W D+ S++ FN +L +FSP G +L +GS D V+ + D
Sbjct: 483 LW----DLSGSRSRSRCRATFNGH----KDFVLSVAFSPDGSWLISGSKDRSVQFW--DP 532
Query: 378 VDSPLGILEVEEHSDKVDSIQWS---HSHLRFVSGSRDGTALIWYY 420
+ ++ ++ H + V S+ S +SH F +GS D + +W Y
Sbjct: 533 RNGTTHMM-LQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKY 577
Score = 160 (61.4 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 64/226 (28%), Positives = 100/226 (44%)
Query: 200 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDN--- 256
NL H S V CV F G+ + TG + +++ GK + S + D+ I +
Sbjct: 277 NLQHNSVVCCVNFSNDGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCF 335
Query: 257 --RNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 314
LA G DKT+++W++ T GH+ I +++ +G ++ S S D
Sbjct: 336 SPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSS---DG-RFIVSGSGDK 391
Query: 315 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W DI+ K F + NE + P N + + SP G +A GS D+ VR++
Sbjct: 392 KAKIW----DIEKGKCAF---TLGNEEVGPKNG-VTSVAMSPDGRLVAAGSLDNIVRLW- 442
Query: 375 MDGVDSPLG-ILE-VEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
D+ G LE E H D V S+ +S SGS D + +W
Sbjct: 443 ----DAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLW 484
Score = 146 (56.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 48/181 (26%), Positives = 82/181 (45%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+G + V V G ++ G+ D +++LW A+ G L G + +A
Sbjct: 412 VGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKS 471
Query: 261 LAAGTVDKTIRIWNLQTLAPIS----VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 316
LA+G++DK++++W+L S GH+ + V F P +G ++L S S D +
Sbjct: 472 LASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP---DG-SWLISGSKDRSV 527
Query: 317 GFWKYKLDIDISKTVFHEPVMFNERIRP-GNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
FW + H+ + + + P N+H G+F ATGSGD R++K
Sbjct: 528 QFWDPRNGTTHMMLQGHKNSVISVALSPKNNSH---------GVF-ATGSGDFRSRLWKY 577
Query: 376 D 376
D
Sbjct: 578 D 578
Score = 145 (56.1 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 210 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 269
V F G + TGA+D +K+W K+ T G +I + + + +G+ DK
Sbjct: 333 VCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKK 392
Query: 270 IRIWNLQTLAPISVLVGHQ--GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI 327
+IW+++ + +G++ G GV + +G +A+ S D + W
Sbjct: 393 AKIWDIEK-GKCAFTLGNEEVGPKNGVTSVAMSPDG-RLVAAGSLDNIVRLWD------- 443
Query: 328 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV 387
++T + F ER + +FSP G LA+GS D ++++ + G S
Sbjct: 444 AQTGY-----FLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRAT 498
Query: 388 -EEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
H D V S+ +S +SGS+D + W
Sbjct: 499 FNGHKDFVLSVAFSPDGSWLISGSKDRSVQFW 530
Score = 128 (50.1 bits), Expect = 0.00025, P = 0.00025
Identities = 64/233 (27%), Positives = 105/233 (45%)
Query: 274 NLQTLAPISVL--VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 331
++QT I +L + H ++ VNF N YLA+ GC + D+D K V
Sbjct: 265 SVQTNLNIDLLHNLQHNSVVCCVNFS----NDGKYLAT----GCNRSAQI-YDVDTGKKV 315
Query: 332 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 391
H V +E + G+ +I FSP G +LATG+ D V+V+ D ++ +
Sbjct: 316 -HAFV--DESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVW-----DIHTKKIQHTFYG 367
Query: 392 DKVD--SIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
++D S+ +S VSGS D A IW ++ C T ++E K
Sbjct: 368 HELDIYSLDYSSDGRFIVSGSGDKKAKIW----------DIEKGKCA-FTLG-NEEVGPK 415
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 502
VT VA R ++ A + + +++WDA G ++ +GH + V+ + P
Sbjct: 416 NGVTSVAMSPDGR-LVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSP 467
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 130 (50.8 bits), Expect = 8.8e-08, Sum P(4) = 8.8e-08
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V V+F ++ + +DD +K+W G L L+G + + + + + L+
Sbjct: 303 GHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLI 362
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D+T+RIW T H+ + V+F + LAS S G + W
Sbjct: 363 ASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFA----HDSRRLASASDGGNVKIWDT 418
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+ + H+ + N+ SFSP LA+ S D V+++
Sbjct: 419 RTGSLQNVLEGHDDCV--------NS----VSFSPDSRLLASASDDRTVKIW 458
Score = 111 (44.1 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV V F ++ + + D +K+W L TL G + + + + + LL
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
A+ + D T++IW+ T +L GH + V F + +AS S D + W+
Sbjct: 321 ASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS----HDSRLIASGSNDRTVRIWE 375
Score = 111 (44.1 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 51/205 (24%), Positives = 85/205 (41%)
Query: 115 HGTSLLVPNSVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSR 174
H + LL S TV + + +G L R M+ H S V + V H++ +
Sbjct: 315 HDSRLLA--SASDDGTVKIWDTA--TGTLQR--MLKGHNDS--VRSVVFSHDSRLIA--- 363
Query: 175 EYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR 234
SG R + I LR + + H +V V F + + +D +K+W R
Sbjct: 364 --SGSNDRTVRIWETTTGLLRHTFED--HEDSVMAVSFAHDSRRLASASDGGNVKIWDTR 419
Query: 235 DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 294
G L L G ++ ++ + LLA+ + D+T++IW+ T + L GH + V
Sbjct: 420 TGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSV 479
Query: 295 NFCPLEVNGFNYLASTSTDGCIGFW 319
F + +AS S D + W
Sbjct: 480 VFS----HDSRLIASASDDMTVKIW 500
Score = 104 (41.7 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
D ++ + + + +KIWD G L L+GH + V + P DSR+L SA DG + IW
Sbjct: 526 DSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIW 584
Score = 98 (39.6 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 35/107 (32%), Positives = 53/107 (49%)
Query: 436 LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 495
L HT E +++ V V++ R + +A + +KIWD G L VL+GH + V
Sbjct: 381 LRHTFEDHEDS-----VMAVSFAHDSRRLASASDGG-NVKIWDTRTGSLQNVLEGHDDCV 434
Query: 496 FVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQR---GYK-WFHNIV 537
+ P DSR+L SA D + IW + S QR G+ W ++V
Sbjct: 435 NSVSFSP-DSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVV 480
Score = 96 (38.9 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV-FVLESHPFDSRVLLS 510
V V++ R + +A + + +KIW A G L + L+GH + V V+ SH DSR++ S
Sbjct: 434 VNSVSFSPDSRLLASASD-DRTVKIWHAATGSLQRTLEGHNDWVRSVVFSH--DSRLIAS 490
Query: 511 AGHDGLIIIWD 521
A D + IWD
Sbjct: 491 ASDDMTVKIWD 501
Score = 93 (37.8 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRFVSGSR 411
FS LA+ S D V+++ D+ G LE +E H D+V+S+ +S S S
Sbjct: 523 FSHDSRLLASASDDMTVKIW-----DTATGSLENTLEGHDDRVNSVSFSPDSRLLASASD 577
Query: 412 DGTALIWY 419
DGT IWY
Sbjct: 578 DGTVKIWY 585
Score = 83 (34.3 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRFVSGS 410
SFSP LA+ S D V+++ + G L+ +E H+D V S+ +SH S S
Sbjct: 438 SFSPDSRLLASASDDRTVKIWH-----AATGSLQRTLEGHNDWVRSVVFSHDSRLIASAS 492
Query: 411 RDGTALIW 418
D T IW
Sbjct: 493 DDMTVKIW 500
Score = 71 (30.1 bits), Expect = 1.7e-06, Sum P(5) = 1.7e-06
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 451 KVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLS 510
+V V++ R + +A + + +KIW A G + G + V + + S +L S
Sbjct: 559 RVNSVSFSPDSRLLASASD-DGTVKIWYAATGTVQHTFDG-SGRVAISLAFSHTSNLLAS 616
Query: 511 AGHDGLIIIWDI-LSSKQRGYKWFHNI 536
A DG + IWD+ + S + + H I
Sbjct: 617 AMDDGTVKIWDMEIYSLRHTFDLDHEI 643
Score = 70 (29.7 bits), Expect = 2.9e-05, Sum P(5) = 2.9e-05
Identities = 26/94 (27%), Positives = 40/94 (42%)
Query: 326 DISKTVFHEPVMFNERIRPG-NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGI 384
D + ++H +R G N + FS +A+ S D V+++ D PL
Sbjct: 452 DRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIW--DTATVPLQN 509
Query: 385 LEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+E H + V S+ +SH S S D T IW
Sbjct: 510 -NLESHDNWVRSVVFSHDSRLLASASDDMTVKIW 542
Score = 68 (29.0 bits), Expect = 3.3e-08, Sum P(5) = 3.3e-08
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRF 406
++ SF+ LA+ S +V+++ D+ G L+ +E H D V+S+ +S
Sbjct: 392 VMAVSFAHDSRRLASASDGGNVKIW-----DTRTGSLQNVLEGHDDCVNSVSFSPDSRLL 446
Query: 407 VSGSRDGTALIWY 419
S S D T IW+
Sbjct: 447 ASASDDRTVKIWH 459
Score = 65 (27.9 bits), Expect = 0.00050, Sum P(4) = 0.00050
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 353 SFSPGGLFLATGSGDHHVRV-YKMDGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS 410
SFSP LA+ S D V++ Y G + + S +V S+ +SH+ S
Sbjct: 564 SFSPDSRLLASASDDGTVKIWYAATGT-----VQHTFDGSGRVAISLAFSHTSNLLASAM 618
Query: 411 RDGTALIW 418
DGT IW
Sbjct: 619 DDGTVKIW 626
Score = 47 (21.6 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 105 LSSYDYIARQHGTSLLVPNSVKVHNTVNVLRS-REYSGPLSRSLMISSHKTSLLVPNSVK 163
+S+ DY+ Q + + + VH+T+ LRS +E S L R+ M + H + V +
Sbjct: 77 VSAKDYLNNQARSDIFPSDLTDVHHTM-FLRSLQEMSLTLQRN-MYNLHHPGVSVDGDMF 134
Query: 164 VHNTVNVLRSREYS 177
+ + L + YS
Sbjct: 135 LLPEPDPLAAVRYS 148
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 855 KRVRRHTKVKPIQVSLPKQLIPEEVPDIYK 884
K +R K+ + S PK+++ + + D+ K
Sbjct: 1566 KVIRDFEKILRLDNSRPKRILEQYMADVKK 1595
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 131 (51.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 250
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 295 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VL 351
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 307
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 352 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 403
Query: 308 ASTSTDGCIGFW 319
S S D I W
Sbjct: 404 VSASGDRTIKVW 415
Score = 129 (50.5 bits), Expect = 0.00019, P = 0.00019
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 385 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 440
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 441 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 478
Score = 113 (44.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 270 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 325
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 326 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 379
Query: 327 IS 328
I+
Sbjct: 380 IT 381
Score = 97 (39.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 440 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 495
Query: 521 DILSS 525
D++++
Sbjct: 496 DLVAA 500
>UNIPROTKB|Q13347 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9606 "Homo sapiens" [GO:0006413 "translational
initiation" evidence=IC;IDA;TAS] [GO:0003743 "translation
initiation factor activity" evidence=IC;IDA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743
GO:GO:0005852 Reactome:REACT_1762 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900 OMA:ATVAGWS
OrthoDB:EOG4HX519 EMBL:U39067 EMBL:U36764 EMBL:BC000413
EMBL:BC003140 IPI:IPI00012795 PIR:S60335 RefSeq:NP_003748.1
UniGene:Hs.530096 ProteinModelPortal:Q13347 SMR:Q13347
DIP:DIP-31116N IntAct:Q13347 MINT:MINT-5004513 STRING:Q13347
PhosphoSite:Q13347 DMDM:2494895 DOSAC-COBS-2DPAGE:Q13347 OGP:Q13347
PaxDb:Q13347 PeptideAtlas:Q13347 PRIDE:Q13347 DNASU:8668
Ensembl:ENST00000373586 GeneID:8668 KEGG:hsa:8668 UCSC:uc001bur.4
GeneCards:GC01P032687 HGNC:HGNC:3272 HPA:HPA029939 HPA:HPA029940
MIM:603911 neXtProt:NX_Q13347 PharmGKB:PA162384875
InParanoid:Q13347 PhylomeDB:Q13347 ChiTaRS:EIF3I GenomeRNAi:8668
NextBio:32515 ArrayExpress:Q13347 Bgee:Q13347 CleanEx:HS_EIF3I
Genevestigator:Q13347 GermOnline:ENSG00000084623 Uniprot:Q13347
Length = 325
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYM---KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|F1SV90 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006413 "translational initiation" evidence=IEA]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 KO:K03246 CTD:8668
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:FP102820
RefSeq:NP_001231553.1 UniGene:Ssc.17315 Ensembl:ENSSSCT00000004007
GeneID:100521499 KEGG:ssc:100521499 Uniprot:F1SV90
Length = 325
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYM---KIPCNDSKITSAVWGPLGECIIAGHEGGELNQYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>MGI|MGI:1860763 [details] [associations]
symbol:Eif3i "eukaryotic translation initiation factor 3,
subunit I" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISO;IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1860763 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006413 eggNOG:COG2319
GO:GO:0003743 GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 OMA:ATVAGWS OrthoDB:EOG4HX519 ChiTaRS:EIF3I
EMBL:AF188297 EMBL:AF271072 EMBL:AK012375 EMBL:AK002896
EMBL:AK010781 EMBL:BC029625 IPI:IPI00269613 RefSeq:NP_061269.1
UniGene:Mm.250874 ProteinModelPortal:Q9QZD9 SMR:Q9QZD9
MINT:MINT-1869798 STRING:Q9QZD9 PhosphoSite:Q9QZD9
REPRODUCTION-2DPAGE:Q9QZD9 PaxDb:Q9QZD9 PRIDE:Q9QZD9
Ensembl:ENSMUST00000102593 GeneID:54709 KEGG:mmu:54709
InParanoid:Q9QZD9 NextBio:311544 Bgee:Q9QZD9 Genevestigator:Q9QZD9
GermOnline:ENSMUSG00000028798 Uniprot:Q9QZD9
Length = 325
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYM---KIPCNDSKITSAVWGPLGECVIAGHESGELNQYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 131 (51.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 250
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 331 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VL 387
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 307
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 388 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 439
Query: 308 ASTSTDGCIGFW 319
S S D I W
Sbjct: 440 VSASGDRTIKVW 451
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 514
Score = 113 (44.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 327 IS 328
I+
Sbjct: 416 IT 417
Score = 97 (39.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 521 DILSS 525
D++++
Sbjct: 532 DLVAA 536
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 130 (50.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 250
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 331 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VL 387
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 307
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 388 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 439
Query: 308 ASTSTDGCIGFW 319
S S D I W
Sbjct: 440 VSASGDRTIKVW 451
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F + S + DG I
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI------VSGAYDGKIKV 530
Query: 319 WKYKLDID 326
W +D
Sbjct: 531 WDLMAALD 538
Score = 108 (43.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
D T+R+W++ ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 327 IS 328
I+
Sbjct: 416 IT 417
Score = 98 (39.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 521 DILSS 525
D++++
Sbjct: 532 DLMAA 536
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 130 (50.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 250
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 331 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VL 387
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 307
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 388 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 439
Query: 308 ASTSTDGCIGFW 319
S S D I W
Sbjct: 440 VSASGDRTIKVW 451
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F + S + DG I
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI------VSGAYDGKIKV 530
Query: 319 WKYKLDID 326
W +D
Sbjct: 531 WDLMAALD 538
Score = 108 (43.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
D T+R+W++ ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 327 IS 328
I+
Sbjct: 416 IT 417
Score = 98 (39.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 521 DILSS 525
D++++
Sbjct: 532 DLMAA 536
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 130 (50.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 34/122 (27%), Positives = 62/122 (50%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNIL 260
GH +V C+ +D+ VI+TG+ D +++W G++L TL C + + +N +
Sbjct: 300 GHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VLHLRFNNG--M 354
Query: 261 LAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+ + D++I +W++ + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 355 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYIVSASGDRTIK 408
Query: 318 FW 319
W
Sbjct: 409 VW 410
Score = 129 (50.5 bits), Expect = 0.00019, P = 0.00019
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 380 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 435
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 436 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 473
Score = 114 (45.2 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 265 VYCLQYDD--QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII--TGSS 320
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 321 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 374
Query: 327 IS 328
I+
Sbjct: 375 IT 376
Score = 97 (39.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 435 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 490
Query: 521 DILSS 525
D++++
Sbjct: 491 DLVAA 495
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 170 (64.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 68/281 (24%), Positives = 124/281 (44%)
Query: 142 PLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMIS-SHKYSNLRQHYVN 200
P S ++SH ++ +SVK + +L S + + + + + + Q +
Sbjct: 13 PYVHSQTLTSHNRAV---SSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFT- 68
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH + + V F IV+ +DD +KLW G L+ TL G + + + ++ +
Sbjct: 69 -GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNM 127
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G+ D+T+RIW++ T + VL H +T V+F +G + + S+S DG W
Sbjct: 128 IVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDF---NRDG-SLIVSSSYDGLCRIWD 183
Query: 321 YKLDIDISKTVFHE--PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGV 378
+ + E PV F +R FSP G F+ G+ D+ +R++ +
Sbjct: 184 SGTGHCVKTLIDDENPPVSF---VR----------FSPNGKFILVGTLDNTLRLWNISSA 230
Query: 379 DSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIW 418
L ++ S +S ++ R VSGS D +W
Sbjct: 231 KF-LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Score = 158 (60.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 57/224 (25%), Positives = 103/224 (45%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + FCV F+ +IV+G+ D +++W GK L L S ++ + + L
Sbjct: 110 IGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSL 169
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+ + + D RIW+ T + L+ + ++ V F P NG L T D + W
Sbjct: 170 IVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP---NGKFILVGT-LDNTLRLW 225
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNA-HILCSSFS-PGGLFLATGSGDHHVRVYKMDG 377
+IS F + + + NA + + S+FS G + +GS D+ V +++++
Sbjct: 226 ------NISSAKFLKT--YTGHV---NAQYCISSAFSVTNGKRIVSGSEDNCVHMWELN- 273
Query: 378 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 421
S + ++E H++ V ++ + SGS D T IW K
Sbjct: 274 --SKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQK 315
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/199 (23%), Positives = 90/199 (45%)
Query: 326 DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLG-- 383
+I T P + ++ + N + FS G LA+ S D +R Y ++ ++ P+
Sbjct: 4 EIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEP 63
Query: 384 ILEVEEHSDKVDSIQWSHSHLRF-VSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKET 442
+ E H + + + +S S RF VS S D T +W + + T + HT
Sbjct: 64 VQEFTGHENGISDVAFS-SDARFIVSASDDKTLKLWDVETGSL------IKTLIGHTNYA 116
Query: 443 SDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 502
V ++ +++ +F+ ++IWD G ++VL H++ V ++ +
Sbjct: 117 F----------CVNFNPQSNMIVSG-SFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 503 FDSRVLLSAGHDGLIIIWD 521
D +++S+ +DGL IWD
Sbjct: 166 -DGSLIVSSSYDGLCRIWD 183
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 51/174 (29%), Positives = 83/174 (47%)
Query: 402 SHLRFVSG---SRDGTALIWYYKCSQWRFIRL-DMNTCL-PHTKETSDETNKKIKVTMVA 456
SH R VS S DG L S + IR +NT P + + T + ++ VA
Sbjct: 22 SHNRAVSSVKFSSDGRLLA---SASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 457 WDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGL 516
+ + R++++A + + +K+WD G L++ L GHTN F + +P S +++S D
Sbjct: 79 FSSDARFIVSASD-DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSNMIVSGSFDET 136
Query: 517 IIIWDILSSKQRGYKWFHN----IVEGQGEGALFDGKWSPDGTTCALTDS-YGH 565
+ IWD+ + K H+ V+ +G+L S DG C + DS GH
Sbjct: 137 VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSS-SYDGL-CRIWDSGTGH 188
Score = 128 (50.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 182 RFLMISSHKYSNLRQHYVNLGHLSAVFCV--LFDKL-GEVIVTGADDLLIKLWRARDGKL 238
R ISS K+ L+ + GH++A +C+ F G+ IV+G++D + +W KL
Sbjct: 223 RLWNISSAKF--LKTY---TGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL 277
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIW 273
L L G + + ++A L+A+G++DKT+RIW
Sbjct: 278 LQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 164 (62.8 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 54/200 (27%), Positives = 94/200 (47%)
Query: 132 NVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMISSHKY 191
N+L S Y + + + + +LL +S V + + + SG + + + I +++
Sbjct: 284 NILASGSYDATIRLWNLATFQQVALLEGHSSGV-TCLQFDQCKLISGSMDKTIRIWNYRT 342
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISD 251
S + GH +V C+ FD ++V+G+ D +KLW GK + TLRG +G ++
Sbjct: 343 SECIS--ILHGHTDSVLCLTFDST--LLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNS 397
Query: 252 IAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 311
+ I L+ +G+ D TI+IW+L+T + H G + + + L S S
Sbjct: 398 VRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALAD------SRLFSCS 451
Query: 312 TDGCIGFWKYKLDIDISKTV 331
DG I W DI+ K V
Sbjct: 452 LDGTIKQW----DIEKKKCV 467
Score = 70 (29.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
IK WD V L GH V+ + + D L+S HDG++ +W+
Sbjct: 456 IKQWDIEKKKCVHTLFGHIEGVWEIAA---DHLRLISGAHDGVVKVWE 500
Score = 37 (18.1 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 35 DWEGATHSQTLAEVASSHPNVTASF-LP 61
D+ +++ +T++ V PN + F LP
Sbjct: 212 DYPTSSNEETISSVKPPSPNSDSKFFLP 239
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 154 (59.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 55/219 (25%), Positives = 101/219 (46%)
Query: 208 FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCS---GEIS-----DIAIDNRNI 259
+C F +++VT + L KLW+ D L+ TLRG + G IS + ++ ++
Sbjct: 221 YCQ-FSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDV 279
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+A+ D ++++W+L + PI+ + GH + V + P +G +L +T D W
Sbjct: 280 NMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHP---SG-RFLGTTCYDHSWRLW 335
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
D+++ + + H+ E G H L F P G TG D RV+ +
Sbjct: 336 ----DLEVQEEILHQ-----EGHSKG-VHDL--HFHPDGSLAGTGGLDSFARVWDLR--- 380
Query: 380 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ ++ +E H ++ SI +S + +GS D +W
Sbjct: 381 TGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVW 419
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 38/152 (25%), Positives = 61/152 (40%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V + F G + TG D ++W R G+ + L G EI I +
Sbjct: 348 GHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHV 407
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A G+ D ++W+L+ I + HQ +++ V F P N +YL + + D W +
Sbjct: 408 ATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQP---NDGHYLLTGAYDNTAKIWTH 464
Query: 322 KLDIDISKTVFHEPVMFNERIRP-GNAHILCS 352
+ HE + + P G CS
Sbjct: 465 PGWSPLKTLAGHEGKVMGVDLSPDGQLIATCS 496
Score = 70 (29.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 25/89 (28%), Positives = 35/89 (39%)
Query: 475 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFH 534
K+WD + + H N V ++ P D LL+ +D IW G+
Sbjct: 417 KVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWT-----HPGWSPLK 471
Query: 535 NIVEGQGEGALFDGKWSPDGTTCALTDSY 563
+ G EG + SPDG A T SY
Sbjct: 472 TLA-GH-EGKVMGVDLSPDGQLIA-TCSY 497
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 130 (50.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 34/122 (27%), Positives = 62/122 (50%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNIL 260
GH +V C+ +D+ VI+TG+ D +++W G++L TL C + + +N +
Sbjct: 341 GHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VLHLRFNNG--M 395
Query: 261 LAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+ + D++I +W++ + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 396 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYIVSASGDRTIK 449
Query: 318 FW 319
W
Sbjct: 450 VW 451
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 514
Score = 114 (45.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 327 IS 328
I+
Sbjct: 416 IT 417
Score = 97 (39.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 521 DILSS 525
D++++
Sbjct: 532 DLVAA 536
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 148 (57.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 50/212 (23%), Positives = 97/212 (45%)
Query: 202 GHLSAVFCVLFDKLG-EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V + G ++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 139 GHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQN-TYQVLSVTFNDTSDQ 197
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D I++W+L+ I + GH +TG++ L +G +YL S S D + W
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLS---LSADG-SYLLSNSMDNSVRVWD 253
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ + V +F + ++L S+S G +A GS D V ++ D
Sbjct: 254 IRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIW--DTTTR 307
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ + ++ H+ V+ + + +SGS D
Sbjct: 308 RI-VYKLPGHAGSVNEVAFHPEEPIVLSGSSD 338
Score = 139 (54.0 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 39/143 (27%), Positives = 63/143 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 260
GH V+C F G + + D LI +W D + ATL+G SG + ++ + L
Sbjct: 54 GHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSL 113
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 319
L + + DKT+ +W+ +T + L GH VN C G + S DG + W
Sbjct: 114 LFSASTDKTVCVWDSETGERVKRLKGHTSF---VNSCFPARRGPQLACTGSDDGTVKLWD 170
Query: 320 -KYKLDIDISKTVFHE-PVMFNE 340
+ K + + + V FN+
Sbjct: 171 IRKKASVHTFQNTYQVLSVTFND 193
Score = 79 (32.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 38/176 (21%), Positives = 73/176 (41%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+L +F+ + +G D+ ++V+ + + L I ++ H D V + S +S
Sbjct: 186 VLSVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-IYSMQGHGDSVTGLSLSADGSYLLS 242
Query: 409 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 466
S D + +W + + R +++ H E + + +W A D I
Sbjct: 243 NSMDNSVRVWDIRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSWSA-DGSKIA 291
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
A + + + IWD +V L GH V + HP + ++LS D + I +I
Sbjct: 292 AGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHP-EEPIVLSGSSDKRLYIGEI 346
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 129 (50.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 34/122 (27%), Positives = 62/122 (50%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNIL 260
GH +V C+ +D+ VI+TG+ D +++W G++L TL C + + +N +
Sbjct: 341 GHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VLHLRFNNG--M 395
Query: 261 LAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+ + D++I +W++ + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 396 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYIVSASGDRTIK 449
Query: 318 FW 319
W
Sbjct: 450 VW 451
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 514
Score = 109 (43.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 326
D T+R+W++ ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 327 IS 328
I+
Sbjct: 416 IT 417
Score = 97 (39.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 521 DILSS 525
D++++
Sbjct: 532 DLVAA 536
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 149 (57.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 36/119 (30%), Positives = 62/119 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH +V + F++LG ++V+G+ D + +W L LRG +I+ + + R+ L
Sbjct: 99 GHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHL 158
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ D I+IW+ +T I +VGH+ I G++ P E L S ++D I FW+
Sbjct: 159 ITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETR----LCSCTSDNQIRFWR 213
Score = 141 (54.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 40/146 (27%), Positives = 68/146 (46%)
Query: 210 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 269
V K G ++ +G D I++W D +L A G G ++ + + +L +G+ D
Sbjct: 65 VCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTE 124
Query: 270 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 329
+ +W++ T + + L GH+ IT V LE + N+L ++S DG I W + I
Sbjct: 125 VIVWDIITESGLFRLRGHRDQITSVKL--LERS--NHLITSSKDGFIKIWDTETQHCIQT 180
Query: 330 TVFHEPVMFNERIRPGNAHILCSSFS 355
V H ++ + P LCS S
Sbjct: 181 IVGHRNPIWGIDVNPDETR-LCSCTS 205
Score = 121 (47.7 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 46/198 (23%), Positives = 88/198 (44%)
Query: 211 LFDKLGEVIVTGADDLLIKLWRARDGKLLATL--RGCSGEISDIAIDNRNILLAAGTVDK 268
+ D G++ +TG + I +W R L +L E++++ + LLA+G D
Sbjct: 23 ILDGSGKLAITGCGER-ISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDG 81
Query: 269 TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDIS 328
+IRIW++ +V GH+G +T + F L G N L S S D + W + +
Sbjct: 82 SIRIWSMSDYQLQAVFNGHRGSVTTMTFNRL---G-NILVSGSKDTEVIVWDIITESGLF 137
Query: 329 KTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVE 388
+ H + + ++ + H++ SS G + H + + G +P+ ++V
Sbjct: 138 RLRGHRDQITSVKLLERSNHLITSS--KDGFIKIWDTETQHC-IQTIVGHRNPIWGIDVN 194
Query: 389 EHSDKVDSIQWSHSHLRF 406
++ S S + +RF
Sbjct: 195 PDETRLCSCT-SDNQIRF 211
Score = 81 (33.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 42/178 (23%), Positives = 76/178 (42%)
Query: 350 LCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG 409
LC+ F+PG L + G+ + V+++ S + ++ H V S+ + SG
Sbjct: 439 LCTVFAPGNLHVIVGTKTGTIEVFELA---SAARVASIKAHEGSVWSLVLTPDLRGVTSG 495
Query: 410 SRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITA 467
D W ++ SQ +N L TK E++ V + + A ++++ +
Sbjct: 496 GADKLVKFWDFELIASQENSKHKVLNLSL--TKTLKVESD----VLALKYSADNKFLAVS 549
Query: 468 INFNFQIKIWDAFNGDLVQV---LKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+ N +KI F D V+ L GH V L+ DS ++++ D I IW +
Sbjct: 550 LLDN-TVKI---FYTDTVKFHLSLYGHKLPVMCLDISD-DSTLIITGSADKNIKIWGL 602
Score = 58 (25.5 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 473 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
+IK WDA + +Q ++ H EV+ L +S HD I I++
Sbjct: 638 RIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGD-FFISGSHDRSIRIFN 685
Score = 56 (24.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 451 KVTMVAWDASD--RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
K+ ++ D SD +IT + + IKIW GD + H + + + P +
Sbjct: 573 KLPVMCLDISDDSTLIITG-SADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIP-STHHF 630
Query: 509 LSAGHDGLIIIWD 521
+SA D I WD
Sbjct: 631 ISASKDKRIKYWD 643
Score = 55 (24.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 25/105 (23%), Positives = 43/105 (40%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
I+ SF P + S D ++ + D + I +E H +V S+ F+S
Sbjct: 618 IMQVSFIPSTHHFISASKDKRIKYWDADKFEH---IQTIEAHHGEVWSLAMGSVGDFFIS 674
Query: 409 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETS--DETNKKIK 451
GS D + I + + F+ D + T E + D+T + K
Sbjct: 675 GSHDRSIRI-FNQTETPIFVESDRQREMEQTWEATLEDDTRMRTK 718
>UNIPROTKB|Q5EBE8 [details] [associations]
symbol:eif3i "Eukaryotic translation initiation factor 3
subunit I" species:8364 "Xenopus (Silurana) tropicalis" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
GeneTree:ENSGT00630000089849 HOVERGEN:HBG000900 OMA:ATVAGWS
OrthoDB:EOG4HX519 EMBL:CR855704 EMBL:BC089722 EMBL:BC127352
EMBL:BC157539 RefSeq:NP_001015781.1 UniGene:Str.31533
ProteinModelPortal:Q5EBE8 STRING:Q5EBE8 PRIDE:Q5EBE8
Ensembl:ENSXETT00000011458 GeneID:548498 KEGG:xtr:548498
Xenbase:XB-GENE-974377 InParanoid:Q5EBE8 Bgee:Q5EBE8 Uniprot:Q5EBE8
Length = 325
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 73/324 (22%), Positives = 145/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D+ D R++
Sbjct: 8 GHERSITQIKYNRDGDLLFTVAKDPVVNVWYSVNGERLGTYSGHTGAVWCVDVDWDTRHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L +G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--SGSADNSCRLWDCETGKQLALLETNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYKLDIDI---SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ ID+ ++ +EP M +I + I + + P G + G + + Y
Sbjct: 120 CFVSFIDLRDPTQIEDNEPYM---KIPCSESKITSAVWGPLGENIIAGHENGELNQYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ + ++EHS +++ IQ S FV+ S+D T+ ++ + + T
Sbjct: 177 SGEI---VNSIKEHSKQINDIQTSRDMTMFVTASKDCTSKLFDSTSLEHQ---KTFRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + V +A D + F+ + + AF + +V KGH +
Sbjct: 231 PVNSAAISPIYDHV-VLGGGQEAMDVTTTSTRIGKFEARFFHVAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
L HP D + S G DG + I
Sbjct: 289 NSLAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|Q5R7R2 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9601 "Pongo abelii" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
HOVERGEN:HBG000900 EMBL:CR860050 RefSeq:NP_001126286.1
UniGene:Pab.18842 ProteinModelPortal:Q5R7R2 PRIDE:Q5R7R2
GeneID:100173261 KEGG:pon:100173261 InParanoid:Q5R7R2
Uniprot:Q5R7R2
Length = 325
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 74/324 (22%), Positives = 144/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L G+ D + R+W+ +T +++L + + T C + G + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGGS--IIMFSTDKQMGYQ 119
Query: 320 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYM---KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGLI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 173 (66.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 417 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 474
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 475 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 526
Query: 318 FWKYK 322
W K
Sbjct: 527 IWDIK 531
Score = 143 (55.4 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 39/124 (31%), Positives = 66/124 (53%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 461 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 517
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 518 S-GNADSTVKIWDIKTGQCLQTLQGPSKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 570
Query: 319 WKYK 322
W K
Sbjct: 571 WDLK 574
Score = 118 (46.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 340 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 397
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 398 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 431
Score = 109 (43.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 202 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 381 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 437
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 438 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 488
Score = 96 (38.9 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 426 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 479
Query: 512 GHDGLIIIWDI 522
D I +WD+
Sbjct: 480 SLDTSIRVWDV 490
Score = 83 (34.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
++ + N + +KIWD G +Q L+G + + F+ ++++ DG + +WD+
Sbjct: 515 ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 573
Score = 78 (32.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 431 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 451 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 501
Query: 491 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
H + +E +L+S D + IWDI
Sbjct: 502 HQSLTSGME---LKDNILVSGNADSTVKIWDI 530
Score = 61 (26.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 32/131 (24%), Positives = 59/131 (45%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G+ + +GS D +RV+ V++ I + H ++ + L VSG+ D T I
Sbjct: 473 GIHVVSGSLDTSIRVWD---VETGNCIHTLTGHQSLTSGMELKDNIL--VSGNADSTVKI 527
Query: 418 WYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIW 477
W K Q CL + S + VT + ++ + +VIT+ + + +K+W
Sbjct: 528 WDIKTGQ----------CLQTLQGPSKHQSA---VTCLQFNKN--FVITSSD-DGTVKLW 571
Query: 478 DAFNGDLVQVL 488
D G+ ++ L
Sbjct: 572 DLKTGEFIRNL 582
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 38/135 (28%), Positives = 67/135 (49%)
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISD 251
S + V +GH +AV V FD+ + IV+ + D IK+W + + TL G I+
Sbjct: 321 SEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA- 377
Query: 252 IAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 311
+ R+ L+ +G+ D +IR+W+++ A + VL GH+ ++ + F + S +
Sbjct: 378 -CLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRI------VSGA 430
Query: 312 TDGCIGFWKYKLDID 326
DG I W +D
Sbjct: 431 YDGKIKVWDLVAALD 445
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 71/290 (24%), Positives = 120/290 (41%)
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G D TI+IW+ L + L+GH G + C L+ + + S S+D + W
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV----LC-LQYDD-KVIISGSSDSTVRVWD 276
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
++ + H + + R G + CS ++ T + +R + G +
Sbjct: 277 VNTGEMVNTLIHHCEAVLHLRFNNGMM-VTCSKDRSIAVWDMTSPSEITLRRVLV-GHRA 334
Query: 381 PLGILEVEEH------SDKVDSIQWSHSHLRFV---SGSRDGTALIWY-----YKCSQWR 426
+ +++ +E D+ + WS S FV +G + G A + Y S
Sbjct: 335 AVNVVDFDEKYIVSASGDRTIKV-WSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN 393
Query: 427 FIRL---DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD----- 478
IRL + CL E +E V + +D R V A ++ +IK+WD
Sbjct: 394 SIRLWDIECGACL-RVLEGHEEL-----VRCIRFDTK-RIVSGA--YDGKIKVWDLVAAL 444
Query: 479 ----AFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 524
A N + L HT VF L+ FD ++S+ HD I+IWD L+
Sbjct: 445 DPRAASNTLCLNTLVEHTGRVFRLQ---FDEFQIVSSSHDDTILIWDFLN 491
Score = 125 (49.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V+C+ +D G+ IV+G D IK+W D + + TL G +G + + D++ I+ +G+
Sbjct: 213 VYCLQYDD-GK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVII--SGSS 268
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
D T+R+W++ T ++ L+ H + + F NG + + S D I W
Sbjct: 269 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVW 315
Score = 125 (49.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 32/123 (26%), Positives = 64/123 (52%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNI 259
+GH +V C+ +D +VI++G+ D +++W G+++ TL C + + +N
Sbjct: 247 MGHTGSVLCLQYDD--KVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA-VLHLRFNNG-- 301
Query: 260 LLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 316
++ + D++I +W++ + + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 302 MMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDE------KYIVSASGDRTI 355
Query: 317 GFW 319
W
Sbjct: 356 KVW 358
Score = 98 (39.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 383 DRLVVSGSSDN-SIRLWDIECGACLRVLEGHEELVRCIR---FDTKRIVSGAYDGKIKVW 438
Query: 521 DILSS 525
D++++
Sbjct: 439 DLVAA 443
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 157 (60.3 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 43/176 (24%), Positives = 85/176 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ ++V+G+ D +++W + G + TL S +S ++ + L+
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
A+G+ D +RIW+ I LV + + V F P NG Y+ +++ D + W
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSP---NG-KYILASNLDSTLKLWD 284
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKM 375
+ + + HE N + + + ++FS GG ++ +GS D + ++ +
Sbjct: 285 FSKGKTLKQYTGHE----NSK------YCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 139 (54.0 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 50/222 (22%), Positives = 95/222 (42%)
Query: 303 GFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLA 362
G N +A +S C+ + I + V + ++ N ++ C +F+P +
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNPQSSLVV 187
Query: 363 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 422
+GS D VR++ V + + I + HSD V ++ ++ SGS DG IW
Sbjct: 188 SGSFDESVRIWD---VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 423 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG 482
Q C+ K D+ N V V + + ++++ A N + +K+WD G
Sbjct: 245 GQ----------CI---KTLVDDENPP--VAFVKFSPNGKYIL-ASNLDSTLKLWDFSKG 288
Query: 483 DLVQVLKGHTNEVFVLESH--PFDSRVLLSAGHDGLIIIWDI 522
++ GH N + + ++ + ++S D I IW++
Sbjct: 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 130 (50.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V + + +V+ +DD +K++ ++ TL+G + + + ++ L+
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G+ D+++RIW+++T I L H ++ V+F +G + +AS S DG + W
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSF---NRDG-SLIASGSYDGLVRIWDT 242
Query: 322 KLDIDISKTVFHE--PVMFNERIRPGNAHILCSS 353
I V E PV F + P +IL S+
Sbjct: 243 ANGQCIKTLVDDENPPVAF-VKFSPNGKYILASN 275
Score = 119 (46.9 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 43/172 (25%), Positives = 72/172 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH ++ F G+ + T + D +K+W TL G ++DIA + + +
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCV 144
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT++I+ + T L GH + NF P + + S S D + W
Sbjct: 145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS----SLVVSGSFDESVRIWDV 200
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
K + I H P +A SF+ G +A+GS D VR++
Sbjct: 201 KTGMCIKTLPAHSD--------PVSA----VSFNRDGSLIASGSYDGLVRIW 240
Score = 100 (40.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
SF+ G +A+GS D VR++ D + V++ + V +++S + ++ + D
Sbjct: 220 SFNRDGSLIASGSYDGLVRIW--DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLD 277
Query: 413 GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 472
T +W + S+ + + K+ + N K + +W+I+ +
Sbjct: 278 STLKLWDF--SKGKTL-----------KQYTGHENSKYCIFANFSVTGGKWIISGSE-DC 323
Query: 473 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH-DGLIIIW 520
+I IW+ ++VQ L+GHT V + HP + + A D I IW
Sbjct: 324 KIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 100 (40.3 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 34/137 (24%), Positives = 58/137 (42%)
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
KL+ TL G + IS L + DKT++IWN+ + L GH+
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHK-------- 129
Query: 297 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP 356
L G N +A +S C+ + I + V + ++ N ++ C +F+P
Sbjct: 130 --L---GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNP 181
Query: 357 GGLFLATGSGDHHVRVY 373
+ +GS D VR++
Sbjct: 182 QSSLVVSGSFDESVRIW 198
Score = 69 (29.3 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V+ V+++ D +I + +++ ++IWD NG ++ L N + + +L++
Sbjct: 216 VSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS 274
Query: 512 GHDGLIIIWDILSSK 526
D + +WD K
Sbjct: 275 NLDSTLKLWDFSKGK 289
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 157 (60.3 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 43/176 (24%), Positives = 85/176 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ ++V+G+ D +++W + G + TL S +S ++ + L+
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
A+G+ D +RIW+ I LV + + V F P NG Y+ +++ D + W
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSP---NG-KYILASNLDSTLKLWD 284
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKM 375
+ + + HE N + + + ++FS GG ++ +GS D + ++ +
Sbjct: 285 FSKGKTLKQYTGHE----NSK------YCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 139 (54.0 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 50/222 (22%), Positives = 95/222 (42%)
Query: 303 GFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLA 362
G N +A +S C+ + I + V + ++ N ++ C +F+P +
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNPQSSLVV 187
Query: 363 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 422
+GS D VR++ V + + I + HSD V ++ ++ SGS DG IW
Sbjct: 188 SGSFDESVRIWD---VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 423 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG 482
Q C+ K D+ N V V + + ++++ A N + +K+WD G
Sbjct: 245 GQ----------CI---KTLVDDENPP--VAFVKFSPNGKYIL-ASNLDSTLKLWDFSKG 288
Query: 483 DLVQVLKGHTNEVFVLESH--PFDSRVLLSAGHDGLIIIWDI 522
++ GH N + + ++ + ++S D I IW++
Sbjct: 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 130 (50.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V + + +V+ +DD +K++ ++ TL+G + + + ++ L+
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G+ D+++RIW+++T I L H ++ V+F +G + +AS S DG + W
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSF---NRDG-SLIASGSYDGLVRIWDT 242
Query: 322 KLDIDISKTVFHE--PVMFNERIRPGNAHILCSS 353
I V E PV F + P +IL S+
Sbjct: 243 ANGQCIKTLVDDENPPVAF-VKFSPNGKYILASN 275
Score = 119 (46.9 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 43/172 (25%), Positives = 72/172 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH ++ F G+ + T + D +K+W TL G ++DIA + + +
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCV 144
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + DKT++I+ + T L GH + NF P + + S S D + W
Sbjct: 145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS----SLVVSGSFDESVRIWDV 200
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
K + I H P +A SF+ G +A+GS D VR++
Sbjct: 201 KTGMCIKTLPAHSD--------PVSA----VSFNRDGSLIASGSYDGLVRIW 240
Score = 100 (40.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
SF+ G +A+GS D VR++ D + V++ + V +++S + ++ + D
Sbjct: 220 SFNRDGSLIASGSYDGLVRIW--DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLD 277
Query: 413 GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 472
T +W + S+ + + K+ + N K + +W+I+ +
Sbjct: 278 STLKLWDF--SKGKTL-----------KQYTGHENSKYCIFANFSVTGGKWIISGSE-DC 323
Query: 473 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH-DGLIIIW 520
+I IW+ ++VQ L+GHT V + HP + + A D I IW
Sbjct: 324 KIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 100 (40.3 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 34/137 (24%), Positives = 58/137 (42%)
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
KL+ TL G + IS L + DKT++IWN+ + L GH+
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHK-------- 129
Query: 297 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP 356
L G N +A +S C+ + I + V + ++ N ++ C +F+P
Sbjct: 130 --L---GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNP 181
Query: 357 GGLFLATGSGDHHVRVY 373
+ +GS D VR++
Sbjct: 182 QSSLVVSGSFDESVRIW 198
Score = 69 (29.3 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V+ V+++ D +I + +++ ++IWD NG ++ L N + + +L++
Sbjct: 216 VSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS 274
Query: 512 GHDGLIIIWDILSSK 526
D + +WD K
Sbjct: 275 NLDSTLKLWDFSKGK 289
>UNIPROTKB|Q66J51 [details] [associations]
symbol:eif3i "Eukaryotic translation initiation factor 3
subunit I" species:8355 "Xenopus laevis" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 GO:GO:0005852
KO:K03246 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900 EMBL:BC081058
RefSeq:NP_001087664.1 UniGene:Xl.77336 ProteinModelPortal:Q66J51
PRIDE:Q66J51 GeneID:447488 KEGG:xla:447488 Xenbase:XB-GENE-974385
Uniprot:Q66J51
Length = 325
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 73/324 (22%), Positives = 145/324 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID--NRNI 259
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + + +D R++
Sbjct: 8 GHERSITQIKYNRDGDLLFTVAKDPVVNVWYSVNGERLGTYNGHTGAVWCVDVDWETRHV 67
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L +G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--SGSADNSCRLWDCETGKQLALLQTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 320 KYKLDIDI---SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ ID+ S+ +EP M +I + I + + P G + G + + Y
Sbjct: 120 CFVSFIDLRDPSQIEDNEPYM---KIPCSESKITSAVWGPLGENIIAGHENGELNHYSAK 176
Query: 377 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 436
+ + ++EHS +++ IQ S FV+ S+D T+ ++ + + T
Sbjct: 177 SGEI---VNSIKEHSKQINDIQTSRDMTMFVTASKDCTSKLFDSTSLEHQ---KTFRTER 230
Query: 437 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 495
P + V +A D + F+ + + AF + +V KGH +
Sbjct: 231 PVNSAAVSPIYDHV-VLGGGQEAMDVTTTSTRIGKFEARFFHVAFEEEFGRV-KGHFGPI 288
Query: 496 FVLESHPFDSRVLLSAGHDGLIII 519
L HP D + S G DG + I
Sbjct: 289 NSLAFHP-DGKSYSSGGEDGYVRI 311
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 166 (63.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 43/153 (28%), Positives = 73/153 (47%)
Query: 202 GHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GHL V CV D + E +TG++D +K+W GKL TL G + D+A+ +R+
Sbjct: 137 GHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPY 196
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
L + + DKT++ W+L+ I GH + V+ P + +A+ D I W
Sbjct: 197 LFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPT----LDLIATAGRDSVIKLWD 252
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 353
+ I + V H+ + + P + ++ SS
Sbjct: 253 MRTRIPVITLVGHKGPINQVQCTPVDPQVVSSS 285
Score = 141 (54.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 55/234 (23%), Positives = 97/234 (41%)
Query: 143 LSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLG 202
L ++ +I + L +V +H T++++ + + + M + L H G
Sbjct: 211 LEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHK---G 267
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 262
++ V C D +V+ + D ++LW GK + L + A+ + +A
Sbjct: 268 PINQVQCTPVDPQ---VVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVA 324
Query: 263 AGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 322
+ D IR W L A S+L + TG+ L +N + L + +G + F+ YK
Sbjct: 325 SACTDD-IRSWGL---AEGSLLTNFESEKTGI-INTLSINQDDVLFAGGDNGVLSFYDYK 379
Query: 323 LDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
E V E G +LCS+F GL L TG D ++++K D
Sbjct: 380 SGHKYQSLATREMVGSLE----GERSVLCSTFDKTGLRLITGEADKSIKIWKQD 429
Score = 52 (23.4 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 514
+++WD G ++VL H V HP + V + D
Sbjct: 290 VRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDD 330
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 132 (51.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 46/145 (31%), Positives = 68/145 (46%)
Query: 202 GHLSAVFCVLFDKLGE-VIVTGADDLLIKLW----------RARD-GKLLA---TLRGCS 246
GH +V V +L E +VTG+ D +KLW A D G +L T + C
Sbjct: 419 GHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCH 478
Query: 247 G-EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
+I+ +AI + LLA G+ D+T ++W L + V GH+ + V F P++
Sbjct: 479 DKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMD----Q 534
Query: 306 YLASTSTDGCIGFWKYKLDIDISKT 330
LA+ S DG I W + D KT
Sbjct: 535 VLATASADGTIKLWALQ-DFSCLKT 558
Score = 128 (50.1 bits), Expect = 0.00040, P = 0.00040
Identities = 30/120 (25%), Positives = 60/120 (50%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI-L 260
GH ++CV F + +V+ T + D IKLW +D L T G + +A +R L
Sbjct: 519 GHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQL 578
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
L++G+ D +++W ++ + L H+ + G++ L+ ++ + ++D + WK
Sbjct: 579 LSSGS-DGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLD----DHALTGASDSRVILWK 633
Score = 114 (45.2 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 32/119 (26%), Positives = 52/119 (43%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNIL 260
H + V + FD ++ TG D +++W RG G + +A D +L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L + D IR+W+LQ + ++VL H +T + F +G L+S CI W
Sbjct: 168 LFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAF---SADGHTMLSSGRDKICI-IW 222
Score = 113 (44.8 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 43/169 (25%), Positives = 75/169 (44%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF-VSGSRD 412
F G LF A+ + D VR+++M+ + + + H+ V ++ S F V+GS+D
Sbjct: 385 FRKGWLF-ASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQD 443
Query: 413 GTALIWYY-KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 471
T +W K + D L + T +K I +A +D+ + T +
Sbjct: 444 CTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIA--PNDKLLATGSQ-D 500
Query: 472 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
K+W L+ V GH ++ ++ P D +VL +A DG I +W
Sbjct: 501 RTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMD-QVLATASADGTIKLW 548
Score = 111 (44.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 28/106 (26%), Positives = 47/106 (44%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 276
+++ TG+ D KLW +LL G + + + +LA + D TI++W LQ
Sbjct: 492 KLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 551
Query: 277 TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 322
+ + GH + V F V+ L S+ +DG + W K
Sbjct: 552 DFSCLKTFEGHDASVLKVAF----VSRGTQLLSSGSDGLVKLWTIK 593
Score = 98 (39.6 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 28/104 (26%), Positives = 48/104 (46%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGC-SGEISDIAIDNRNILLAAGTVDKTIRIWNL 275
EV+VT + LL+ W ++G + + + ++ +A D + LLA G D +R+W++
Sbjct: 79 EVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDI 138
Query: 276 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
G G++ V F P L S++TD I W
Sbjct: 139 VRHYGTHHFRGSPGVVHLVAFHPDPTRLL--LFSSATDAAIRVW 180
Score = 76 (31.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW-DILSSKQ 527
+K+W N + V+ L H ++V+ L D L A D +I+W D+ ++Q
Sbjct: 587 VKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGAS-DSRVILWKDVTEAEQ 640
Score = 68 (29.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 455 VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR--VLLSAG 512
V + D+ + TA + + IK+W + ++ +GH V + F SR LLS+G
Sbjct: 527 VQFSPMDQVLATA-SADGTIKLWALQDFSCLKTFEGHDASVLKVA---FVSRGTQLLSSG 582
Query: 513 HDGLIIIWDILSSK 526
DGL+ +W I +++
Sbjct: 583 SDGLVKLWTIKNNE 596
Score = 61 (26.5 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 17/71 (23%), Positives = 28/71 (39%)
Query: 351 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS 410
C FSP LAT S D ++++ + + E H V + + + +S
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWALQDFSC---LKTFEGHDASVLKVAFVSRGTQLLSSG 582
Query: 411 RDGTALIWYYK 421
DG +W K
Sbjct: 583 SDGLVKLWTIK 593
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 115 (45.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 276
+++ G D +IK+W +L G I+ + D L +G+ D I +W+L
Sbjct: 92 DLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLV 151
Query: 277 TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH 333
+ L H+ ITG +C G ++L STS DG I W K I + H
Sbjct: 152 GEVGLYKLRSHKDSITGF-WC----QGEDWLISTSKDGMIKLWDLKTHQCIETHIAH 203
Score = 113 (44.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 42/176 (23%), Positives = 78/176 (44%)
Query: 348 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV 407
+ L F PGGL + G+ + ++++ + S L +E + H + S+ + R V
Sbjct: 432 YALTCKFLPGGLLVILGTRNGELQLFDLAS-SSLLDTIE-DAHDAAIWSLDLTSDGKRLV 489
Query: 408 SGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK-VTMVAWDASDRWVIT 466
+GS D T W +K + N LP K D T + + V DR++
Sbjct: 490 TGSADKTVKFWDFKVEN-SLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAI 548
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
++ N +K++ + L GH V ++ FDS++++++ D I IW +
Sbjct: 549 SLLDN-TVKVFFLDSMKFYLSLYGHKLPVLSIDIS-FDSKMIITSSADKNIKIWGL 602
Score = 103 (41.3 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH +A+ + FD G +++G+ D I +W L LR I+ + L+
Sbjct: 119 GHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVGEVGLYKLRSHKDSITGFWCQGEDWLI 178
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ D I++W+L+T I + H G G L V + L +T TD + WK
Sbjct: 179 STSK-DGMIKLWDLKTHQCIETHIAHTGECWG-----LAVKD-DLLITTGTDSQVKIWK- 230
Query: 322 KLDIDISK 329
LDI+ K
Sbjct: 231 -LDIENDK 237
Score = 73 (30.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
+K WD + +Q L H +EV+ L + D ++S+ HD I IW+
Sbjct: 639 VKYWDGEKFECIQKLYAHQSEVWAL-AVATDGGFVVSSSHDHSIRIWE 685
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 167 (63.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 53/221 (23%), Positives = 98/221 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + VFC F+ ++V+G+ D +++W R G + TL S +S ++ + L+
Sbjct: 161 GHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLI 220
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+G+ D +RIW+ + LV + + V F P NG Y+ S++ D + W
Sbjct: 221 TSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP---NG-KYILSSNLDNTLKLWD 276
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVD 379
+ + + HE N + + ++FS GG ++ +GS D + V+ + +
Sbjct: 277 FGKGKTLKQYQGHE----------NNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKE 326
Query: 380 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR--DGTALIW 418
+ +E H+ V + SG+ D T IW
Sbjct: 327 V---VQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 127 (49.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIA--IDNRNI 259
GH ++ V F G+ + T + D +K+W D TL G ++D A D+++I
Sbjct: 77 GHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSI 136
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+ A+ DKT++I+ + T+ L GH + NF P + + S S D + W
Sbjct: 137 VTASD--DKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQS----SLVVSGSFDESVRIW 190
Query: 320 KYKLDIDISKTVFH-EPVMFNERIRPGNAHILCSSFSPGGL 359
+ + + H +PV R G+ L +S S GL
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGS---LITSGSYDGL 228
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 70/316 (22%), Positives = 131/316 (41%)
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
KL++T+ G + IS + L + DKT++IWN+ L+ L GH+ GVN
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHK---LGVND 126
Query: 297 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT-------VF---HEP----VM---FN 339
+ + + + S D + ++ + ++KT VF P V+ F+
Sbjct: 127 FAWSADSKS-IVTASDDKTLKIYEVPT-VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFD 184
Query: 340 ERIRPGN-----------AH---ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGIL 385
E +R + AH + SF+ G + +GS D VR++ D +
Sbjct: 185 ESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW--DTANGQCVKT 242
Query: 386 EVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 445
V++ + V +++S + +S + D T +W + + + + K+
Sbjct: 243 LVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDF--GKGKTL-----------KQYQGH 289
Query: 446 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
N K + +W+I+ + +I +W+ ++VQ L+GHT V + HP +
Sbjct: 290 ENNKYCIFANFSVTGGKWIISGSE-DCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQN 348
Query: 506 RVLLSAGH-DGLIIIW 520
+ A D I IW
Sbjct: 349 MIASGALEPDNTIRIW 364
Score = 77 (32.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V+ V+++ D +IT+ +++ ++IWD NG V+ L N + + +LS+
Sbjct: 208 VSAVSFNR-DGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSS 266
Query: 512 GHDGLIIIWDILSSKQ-RGYKWFHN 535
D + +WD K + Y+ N
Sbjct: 267 NLDNTLKLWDFGKGKTLKQYQGHEN 291
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 162 (62.1 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 50/196 (25%), Positives = 94/196 (47%)
Query: 180 LSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL 239
LS++ + SH + L V G LS C +V+ GAD ++ R R+ +++
Sbjct: 205 LSKYRQVGSH--AGLHSASVP-GILSLDLCPT--DTNKVLTGGADKNVVVFDR-REEQIV 258
Query: 240 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 299
ATL+G + ++S + ++ + + D TIR+W++ + V+ H+ +TG++ L
Sbjct: 259 ATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLS---L 315
Query: 300 EVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL 359
G +YL S+S D +W + DI + V+ + C+ F P GL
Sbjct: 316 HATG-DYLLSSSEDQ---YWAFS-DIQTGR------VLTKVTDETAGCALTCAQFHPDGL 364
Query: 360 FLATGSGDHHVRVYKM 375
TG+GD ++++ +
Sbjct: 365 IFGTGTGDSQIKIWDL 380
Score = 56 (24.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 473 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 526
QIKIWD V GH+ V + + + L + D + +WD+ K
Sbjct: 374 QIKIWDLKERTNVANFPGHSGPVTAI-AFSENGYYLATGAQDSSLKLWDLRKLK 426
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 139 (54.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 192 SNLRQHYV--NLGHLSAVFCVLFDKLGE-VIVTGADDLLIKLW-----RARDGKLL---- 239
S+ R H V GH +AV + ++ + +V+G+ D +K+W +G ++
Sbjct: 418 SSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKAR 477
Query: 240 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 299
+T R +++ + + + LLA+G+ D+T ++W L L + V GH+ + V F P+
Sbjct: 478 STERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPV 537
Query: 300 EVNGFNYLASTSTDGCIGFWKYKLDIDISKT 330
+ L S S DG + W + D KT
Sbjct: 538 D----QILGSASADGSVRIWSIQ-DFSCLKT 563
Score = 118 (46.6 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 49/171 (28%), Positives = 80/171 (46%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLG-ILEVEEHSDKVDSIQWSHSHLRFV-SGSR 411
F G +F AT + D VRV++MD + + + HS+ V SI S +FV SGS+
Sbjct: 395 FRKGSMF-ATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQ 453
Query: 412 DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 471
D T +W + + M K S E + V V +D+ ++ + + +
Sbjct: 454 DCTVKVWDLPETTGAEGVMMM-------KARSTERAHEKDVNSVCVSPNDK-LLASGSQD 505
Query: 472 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
K+W + L+ V +GH V+ ++ P D ++L SA DG + IW I
Sbjct: 506 RTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVD-QILGSASADGSVRIWSI 555
Score = 108 (43.1 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 35/131 (26%), Positives = 57/131 (43%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNIL 260
H V + FD ++ TG D IKLW L+G SG + + D +
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 164
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
L + + D IRIW+L++ + VL H +T + F P +G L S+ D W
Sbjct: 165 LFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSP---DGHT-LVSSGRDKICSVWD 220
Query: 321 YKLDIDISKTV 331
+ + + +T+
Sbjct: 221 LQ-EQKVKRTI 230
Score = 62 (26.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR--VLLSAGHDGLIIIWDILSSK 526
++IW + ++ +GH V + F SR L+S+G DGL+ +W I +++
Sbjct: 550 VRIWSIQDFSCLKTFEGHDASVLKII---FVSRGTQLVSSGSDGLVKLWTIKTNE 601
Score = 57 (25.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
+K+W + V+ L H ++V+ L D ++++ D I +W
Sbjct: 592 VKLWTIKTNECVRTLDAHQDKVWALHGGCRDE-LMVTGSADSTITVW 637
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 177 (67.4 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 159 (61.0 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 53/179 (29%), Positives = 83/179 (46%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D+TIR W+L+ +S + G G V + V G + GC +Y
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPG---PVRYAGSWVVGLS--PPPKVVGC----RY 255
Query: 322 KLDIDISK----TVFHE-PVMFNERIRPGNAHILCSS--FSPGGLFLATGSGDHHVRVY 373
+ S ++F P F + +RP L S F+P G L +G D +RVY
Sbjct: 256 GAGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQDS-LRVY 313
Score = 138 (53.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 136 (52.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+ D T+++W+L +S GH G + V F P E LAS S+D I FW
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSDRTIRFW 216
Score = 42 (19.8 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 877 EEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 908
EE +I++P + ++ P+++ +P ++ M
Sbjct: 436 EEYNEIFQPKNSISRTPPRRSEPFPAPPEDDM 467
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 120 (47.3 bits), Expect = 0.00083, P = 0.00083
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 220 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 279
+ GA +K W D K L ++RG S EI+ IA+ N +A + TI I++L
Sbjct: 246 LVGAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGK 305
Query: 280 PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
++ L GHQG + + F P +G N L S + D + W
Sbjct: 306 QVTTLRGHQGWVLSLAFSP---DG-NTLYSGAEDKTVKIW 341
Score = 111 (44.1 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 29/87 (33%), Positives = 39/87 (44%)
Query: 436 LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 495
L KE +++ +A ++RWV TA N I I+D NG V L+GH V
Sbjct: 259 LADAKELFSVRGPSLEINTIAVSPNNRWVATA-NKEGTIMIFDLANGKQVTTLRGHQGWV 317
Query: 496 FVLESHPFDSRVLLSAGHDGLIIIWDI 522
L P D L S D + IWD+
Sbjct: 318 LSLAFSP-DGNTLYSGAEDKTVKIWDL 343
Score = 104 (41.7 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 28/101 (27%), Positives = 41/101 (40%)
Query: 201 LGHLSAVFCVLFDKLGEVIVT-GADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNR 257
+GH V V F GE IV+ D I++W G L+ TL G + + D
Sbjct: 141 VGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTLADNLGPTTSVVFTPDGS 200
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
+ A D+TI+ W+ T + G I G+ P
Sbjct: 201 QFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTP 241
Score = 102 (41.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 216 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNILLAAGTVDKTIRIW 273
G+ + AD+ + + R RDG + TL G + ++S +A D I+ +G D+TIRIW
Sbjct: 115 GQWLAIAADNN-VDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGG-DRTIRIW 172
Query: 274 NLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST-STDGCIGFW 319
+ I L + G T V F P +G ++ D I FW
Sbjct: 173 ERASGNLIQTLADNLGPTTSVVFTP---DGSQFITGAIGQDRTIKFW 216
Score = 69 (29.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/92 (23%), Positives = 48/92 (52%)
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
R ++ A+ NF +K W+ + + ++G + E+ + P ++R + +A +G I+I+D
Sbjct: 244 RKLVGAVR-NF-VKAWNLADAKELFSVRGPSLEINTIAVSP-NNRWVATANKEGTIMIFD 300
Query: 522 ILSSKQ----RGYK-WFHNIVEGQGEGALFDG 548
+ + KQ RG++ W ++ L+ G
Sbjct: 301 LANGKQVTTLRGHQGWVLSLAFSPDGNTLYSG 332
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 168 (64.2 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 82/376 (21%), Positives = 155/376 (41%)
Query: 50 SSHPNVTASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXX-EKSLAKSVLS-- 106
S+ NV+ + +P + + L D + +F + A V+S
Sbjct: 62 SAPRNVSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISRL 121
Query: 107 SYDYIARQHGTSLLVPN-SVKVHNTVNVLRSREYSGPLSRSLM--ISSHKTSLLVPNSVK 163
S + A + S L P+ S KV + V++ S + G LS +++ + SL +
Sbjct: 122 SKELTAAREALSTLKPHTSAKVDDDVSIDESEDQQG-LSEAILAKLEEKSKSLTAERKQR 180
Query: 164 VHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGA 223
N L E L+ +SH + + H ++A+ D G + +TG
Sbjct: 181 GKNLPEGLAKTE---ELAELKQTASH--TGI--HSTGTPGITAL-----DIKGNLSLTGG 228
Query: 224 DDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 283
D + L+ +++ T +G + +I+ + + NI + + D IR+W+ + ++
Sbjct: 229 IDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAI 288
Query: 284 LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIR 343
+ HQ +T ++ L +G +Y+ S S D +W + DI K+ + +
Sbjct: 289 IDVHQAPVTDIS---LNASG-DYILSASDDS---YWAFS-DIRSGKS------LCKVSVE 334
Query: 344 PGNAHILCS-SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS 402
PG+ + S F P GL TG+ D V+++ + H+ V SI +S +
Sbjct: 335 PGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAF---PGHTAAVRSIAFSEN 391
Query: 403 HLRFVSGSRDGTALIW 418
+GS DG +W
Sbjct: 392 GYYLATGSEDGEVKLW 407
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 135 (52.6 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 218 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 277
+ T + D K+W +G+L ATL + D++ + LLA + DKT++IW+L T
Sbjct: 505 IFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDT 564
Query: 278 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+ + L GH + +F +N L S DG I W
Sbjct: 565 FSVMKTLEGHTNAVQRCSF----INKQKQLISCGADGLIKIW 602
Score = 103 (41.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 38/147 (25%), Positives = 69/147 (46%)
Query: 201 LGHLSAVFCVLFDKL---G--EVIVTGADDLLIKLW------RARDGKLLA----TLRGC 245
+GH +AV V + G E ++T ++DL IK W + D +++ T
Sbjct: 431 IGHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAH 490
Query: 246 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
+I+ +++ + + A + DKT +IWNL+ + L H+ + V+FC +
Sbjct: 491 EKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYD----K 546
Query: 306 YLASTSTDGCIGFWKYKLD-IDISKTV 331
LA++S D + W LD + KT+
Sbjct: 547 LLATSSGDKTVKIWS--LDTFSVMKTL 571
Score = 89 (36.4 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
IKIWD +G+ ++ L GH N ++ L + D +++SA DG+ W
Sbjct: 599 IKIWDCSSGECLKTLDGHNNRLWALSTMN-DGDMIVSADADGVFQFW 644
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 141 (54.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 55/187 (29%), Positives = 82/187 (43%)
Query: 202 GHLSAVFCVLFDKLGE-VIVTGADDLLIKLW-----------RARDGKLLA---TLRGCS 246
GH +V + +L E +VTG+ D +KLW A G +L T R C
Sbjct: 419 GHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCH 478
Query: 247 G-EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
+I+ +A+ + LLA G+ D+T ++W L + V GH+ + V F P +
Sbjct: 479 DKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTD----Q 534
Query: 306 YLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGGLFLATG 364
LA+ S DG I W + D KT H+ + + +L SS S G L L T
Sbjct: 535 VLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVAFVSRGSQLL-SSGSDGLLKLWTI 592
Query: 365 SGDHHVR 371
+ VR
Sbjct: 593 KSNECVR 599
Score = 120 (47.3 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNIL 260
H + V + FD ++ TG D +++W RG G + +A D +L
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L + VD +IR+W+LQ + ++VL H +T ++F G L+S CI W
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSE---GGHTMLSSGRDKICI-VW 222
Score = 104 (41.7 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF-VSGSRD 412
F G LF A+ + D +R++KM+ + + H+ V +I S F V+GS+D
Sbjct: 385 FRKGWLF-ASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQD 443
Query: 413 GTALIWYY-KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 471
T +W + + D L + T +K I V+ +D+ + T +
Sbjct: 444 CTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVS--PNDKLLATGSQ-D 500
Query: 472 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
K+W L+ V GH ++ ++ P D +VL +A DG I +W
Sbjct: 501 RTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTD-QVLATASADGTIKLW 548
Score = 94 (38.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGC-SGEISDIAIDNRNILLAAGTVDKTIRIWNL 275
EV+VT + LL+ W R+G + + + ++ +A D + LLA G D +R+W++
Sbjct: 79 EVLVTASRALLLAQWAWREGTVTRLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDI 138
Query: 276 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
G G++ V F P L S++ D I W
Sbjct: 139 VQHYGTHHFRGSPGVVHLVAFHPDPTRLL--LFSSAVDTSIRVW 180
Score = 73 (30.8 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW-DILSSKQ 527
+K+W + + V+ L H ++V+ L D + + G D II+W D+ ++Q
Sbjct: 587 LKLWTIKSNECVRTLDAHEDKVWGLHCSQLDDHAI-TGGSDSRIILWKDVTEAEQ 640
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 455 VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 514
V + +D+ + TA + + IK+W + ++ +GH V + S+ LLS+G D
Sbjct: 527 VQFSPTDQVLATA-SADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQ-LLSSGSD 584
Query: 515 GLIIIWDILSSK 526
GL+ +W I S++
Sbjct: 585 GLLKLWTIKSNE 596
Score = 55 (24.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 16/71 (22%), Positives = 29/71 (40%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 413
FSP LAT S D ++++ + + E H V + + + +S DG
Sbjct: 529 FSPTDQVLATASADGTIKLWALQDFSC---LKTFEGHDASVLKVAFVSRGSQLLSSGSDG 585
Query: 414 TALIWYYKCSQ 424
+W K ++
Sbjct: 586 LLKLWTIKSNE 596
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 132 (51.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 182 RFLMISSHKYSNLR-QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA 240
RF + S+ + + R Q + GH+ V + F+ ++ TG+ D I +W GKL+
Sbjct: 281 RFKVESNWRKGHCRIQEFK--GHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFTGKLIR 336
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVN 295
L G S + + D+R ++ G++DKTIR+WN T IS GH + V+
Sbjct: 337 RLSGHSDGVKTLYFDDRKLI--TGSLDKTIRVWNYITGECISTYRGHSDSVLSVD 389
Score = 124 (48.7 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH +V V D +VIV+G+ D +K+W + + TLRG + ++ + + ++
Sbjct: 380 GHSDSVLSV--DSYQKVIVSGSADKTVKVWHV-ESRTCYTLRGHTEWVNCVKLHPKSFSC 436
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST-DG 314
+ + D TIR+W+++T + + V GH G + + PL + LA+ +T DG
Sbjct: 437 FSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKI--IPLTIKDVENLATDNTSDG 488
Score = 89 (36.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 526
IK+WD G ++ GH V+ + + F R++ S HDG I +WD+ S K
Sbjct: 534 IKLWDVKTGKCIRTQFGHVEGVWDIAADNF--RII-SGSHDGSIKVWDLQSGK 583
Score = 62 (26.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
VI + + + +K+W L+GHT V ++ HP S S D I +WDI
Sbjct: 394 VIVSGSADKTVKVWHV-ESRTCYTLRGHTEWVNCVKLHP-KSFSCFSCSDDTTIRMWDI 450
Score = 53 (23.7 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 494 EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEG 539
E + E+ P+ + LLS G D I +WD+ + K ++ H VEG
Sbjct: 512 ETVLDENIPYPTH-LLSCGLDNTIKLWDVKTGKCIRTQFGH--VEG 554
Score = 52 (23.4 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 457 WD-ASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
WD A+D + I + + + IK+WD +G + G
Sbjct: 556 WDIAADNFRIISGSHDGSIKVWDLQSGKCMHTFNG 590
Score = 47 (21.6 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEV 495
I++WD ++V +GH +V
Sbjct: 445 IRMWDIRTNSCLKVFRGHVGQV 466
Score = 47 (21.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 403 HLRFVSGSRDGTALIW 418
+ R +SGS DG+ +W
Sbjct: 562 NFRIISGSHDGSIKVW 577
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 177 (67.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 164 (62.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
A+G+ D+TIR W+L+ +S + G G + V F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 138 (53.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 136 (52.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+ D T+++W+L +S GH G + V F P E LAS S+D I FW
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSDRTIRFW 216
Score = 109 (43.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V + + +W+ +A + + +K+WD G ++ GHT V V+E HP + +L S
Sbjct: 150 VRCLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASG 207
Query: 512 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 570
D I WD L Q + +EG+ G + ++PDG C + L VYG
Sbjct: 208 SSDRTIRFWD-LEKFQ-----VVSCIEGE-PGPVRSVLFNPDGC-CLYSGCQDSLRVYG 258
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G LATG D V ++ ++ P I+ + H+ V+S++ + V+GS+ G+ +
Sbjct: 33 GRLLATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 418 W 418
W
Sbjct: 90 W 90
Score = 42 (19.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 877 EEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 908
EE +I++P + ++ P+++ +P ++ M
Sbjct: 380 EEYNEIFQPKNSISRTPPRRSEPFPAPPEDDM 411
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 167 (63.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 91/378 (24%), Positives = 150/378 (39%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 240 DVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA--STLGQHKGPIFALKW---NKKG-NY 293
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH +A L + F A+ S
Sbjct: 294 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF-ASCST 340
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 341 DMCIHVCRL-GCDRP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDA 395
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H+KE T K + + ++ + +F+ +++WD G +
Sbjct: 396 CVH-DLQA---HSKEIY--TIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIH 449
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE----GQG 541
L H V+ + P D + L S D + IW+ S S Y+ I E +G
Sbjct: 450 TLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARG 508
Query: 542 EGALFDGKWSPDGTTCAL 559
+ G + DG+ C L
Sbjct: 509 DKV---GASASDGSVCVL 523
Score = 94 (38.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFN 339
+VL GH+ + + P+ + LAS S D W + + T V +
Sbjct: 176 TVLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 231
Query: 340 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQ 398
P N + ++ G LATGS D R++ DG + S LG +H + +++
Sbjct: 232 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLG-----QHKGPIFALK 286
Query: 399 WSHSHLRFVSGSRDGTALIW 418
W+ +S D T +IW
Sbjct: 287 WNKKGNYILSAGVDKTTIIW 306
Score = 88 (36.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + +F+ +++WD G + L H V+ + P D + L S D + IW+
Sbjct: 427 MLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNT- 484
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 571
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 485 ---QSG-SLVHSY---RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 525
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 167 (63.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 91/378 (24%), Positives = 150/378 (39%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 240 DVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA--STLGQHKGPIFALKW---NKKG-NY 293
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH +A L + F A+ S
Sbjct: 294 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF-ASCST 340
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 341 DMCIHVCRL-GCDRP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDA 395
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H+KE T K + + ++ + +F+ +++WD G +
Sbjct: 396 CVH-DLQA---HSKEIY--TIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIH 449
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE----GQG 541
L H V+ + P D + L S D + IW+ S S Y+ I E +G
Sbjct: 450 TLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARG 508
Query: 542 EGALFDGKWSPDGTTCAL 559
+ G + DG+ C L
Sbjct: 509 DKV---GASASDGSVCVL 523
Score = 94 (38.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFN 339
+VL GH+ + + P+ + LAS S D W + + T V +
Sbjct: 176 TVLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 231
Query: 340 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQ 398
P N + ++ G LATGS D R++ DG + S LG +H + +++
Sbjct: 232 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLG-----QHKGPIFALK 286
Query: 399 WSHSHLRFVSGSRDGTALIW 418
W+ +S D T +IW
Sbjct: 287 WNKKGNYILSAGVDKTTIIW 306
Score = 88 (36.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + +F+ +++WD G + L H V+ + P D + L S D + IW+
Sbjct: 427 MLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNT- 484
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 571
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 485 ---QSG-SLVHSY---RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 525
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 124 (48.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 42/183 (22%), Positives = 75/183 (40%)
Query: 194 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIA 253
L +H+ GH + + F G I T + D + LW S ++ +A
Sbjct: 10 LERHFT--GHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVA 67
Query: 254 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 313
+ L+A+ D+T++IW + V H + V+F + G + + + S D
Sbjct: 68 WSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDF---DSTG-HLMLTASDD 123
Query: 314 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
W+ +++ F F ++ N + + FSP G +AT S D VR+Y
Sbjct: 124 KSAKIWR------VARRQFVSS--FAQQ----NNWVRSAKFSPNGKLVATASDDKSVRIY 171
Query: 374 KMD 376
+D
Sbjct: 172 DVD 174
Score = 93 (37.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 40/172 (23%), Positives = 75/172 (43%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+ H AV V FD G +++T +DD K+WR + +++ + + L
Sbjct: 99 VAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKL 158
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+A + DK++RI+++ + + + + + P G N LA GC +
Sbjct: 159 VATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPW---G-NMLAVAL--GCN---R 209
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
K+ D+S + + ++ P N +F P G FL +GS D +R+
Sbjct: 210 IKI-FDVSGSQLLQ--LYVVHSAPVND----VAFHPSGHFLLSGSDDRTIRI 254
Score = 90 (36.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKM-DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR 411
+F P G FL +GS D +R+ + +G P I + H+D V+++ +S +F +G
Sbjct: 235 AFHPSGHFLLSGSDDRTIRILDLLEG--RP--IYTLTGHTDAVNAVAFSRDGDKFATGGS 290
Query: 412 DGTALIWYYKCSQWRFIRLDMNTCLPHTK-ETSDETNKK 449
D L+W + + + + L + E+S ++K+
Sbjct: 291 DRQLLVWQSNLHTYDASQFEAKSALASSSCESSGVSSKQ 329
Score = 90 (36.7 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 26/90 (28%), Positives = 37/90 (41%)
Query: 234 RDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITG 293
RD L G SG I+ + +A + D T+ +WNL A H + G
Sbjct: 6 RDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNG 65
Query: 294 VNFCPLEVNGFNYLASTSTDGCIGFWKYKL 323
V + P G N +AS D + W+ KL
Sbjct: 66 VAWSP---KG-NLVASAGHDRTVKIWEPKL 91
Score = 57 (25.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V VA+ S ++++ + + I+I D G + L GHT+ V + + D +
Sbjct: 231 VNDVAFHPSGHFLLSGSD-DRTIRILDLLEGRPIYTLTGHTDAVNAV-AFSRDGDKFATG 288
Query: 512 GHDGLIIIW 520
G D +++W
Sbjct: 289 GSDRQLLVW 297
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 147 (56.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 48/170 (28%), Positives = 74/170 (43%)
Query: 191 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS 250
+S ++ GH +V CV I T + D IK+W A +L TL G IS
Sbjct: 41 HSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGIS 100
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 310
+ + LA+ + DKTIRIW+ + + L GH ++ ++F PL G L S
Sbjct: 101 QVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPL---G-TLLVSG 156
Query: 311 STDGCIGFWKYKLDIDISKTVFH-EPVMFNERIRPGNAHILCSSFSPGGL 359
S D + W + + H EP++ G LC++ S G+
Sbjct: 157 SWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGT---LCATASYDGM 203
Score = 130 (50.8 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 50/180 (27%), Positives = 78/180 (43%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G ++ +++ +A + D TI+IW+ T L GH I+ V +
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWA--- 105
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS-SFSPGGL 359
G YLAS S D I W ++ + R G+ + + S F+P G
Sbjct: 106 -TGSKYLASASDDKTIRIWDFEKRCSV-------------RCLKGHTNYVSSIDFNPLGT 151
Query: 360 FLATGSGDHHVRVYKM-DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
L +GS D VR++ + DG + L +L HS+ + S+ S + S DG A IW
Sbjct: 152 LLVSGSWDETVRIWNLQDG--TCLRMLPA--HSEPIISVSISADGTLCATASYDGMARIW 207
Score = 65 (27.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/117 (21%), Positives = 50/117 (42%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
HS+ + S+ S + S DG A IW Q CL K + N
Sbjct: 179 HSEPIISVSISADGTLCATASYDGMARIWDVLSGQ----------CL---KTLVEPIN-- 223
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR 506
+ ++ + + + ++++ + N N QI++WD +V++ H N + + + S+
Sbjct: 224 VPLSNLQFTENRKYLLVS-NLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSWDCYSSK 279
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 130 (50.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 55/226 (24%), Positives = 101/226 (44%)
Query: 194 LRQHYVNLGHLSAVFCVLFDKLGEVIVTG-ADDLLIKLWRARDGKLLATLRGCSGEISDI 252
+R+H GH V + K+G ++T +DD +K+W +R + T+ ++ +
Sbjct: 128 IRKHK---GHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEE-KYPLTAV 183
Query: 253 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 312
AI + + G +D I+IW+L+ VL GH+ IIT + + +G + L S S
Sbjct: 184 AIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSL---AISKDGSSLL-SNSM 239
Query: 313 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
D + + D+ + + +F I ++L ++S F+ GS D +V V
Sbjct: 240 DNTVRIF----DVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYV 295
Query: 373 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV-SGSRDGTALI 417
+ G L + + H V+ + + H H + S S D T +
Sbjct: 296 WSATG---DLRYV-LPGHEGSVNHVDF-HPHQDIILSCSSDRTIFL 336
Score = 117 (46.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/131 (27%), Positives = 55/131 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRA-RDGKLLATLRGCSGEISDIAIDNRNIL 260
GH + V FD G +G D I LW D K L GC G I+D+ + +
Sbjct: 48 GHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRV 107
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ + D + W+ + I GH G++ ++ L+V G L S S D + W
Sbjct: 108 VYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDV--LKV-GSELLTSVSDDCTMKVWD 164
Query: 321 YKLDIDISKTV 331
+ D KT+
Sbjct: 165 SRSK-DCIKTI 174
Score = 95 (38.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 32/102 (31%), Positives = 44/102 (43%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYK 531
IKIWD N VLKGH + + L D LLS D + I+D+ +S QR +
Sbjct: 201 IKIWDLRNNHCSHVLKGHKDIITSLAISK-DGSSLLSNSMDNTVRIFDVKPFASAQRQLQ 259
Query: 532 WFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGG 573
F + GQ E L WS + S ++ V+ G
Sbjct: 260 IFEGAIHGQ-EHNLLGVAWSRNSRFVGAGSSDKNVYVWSATG 300
Score = 85 (35.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETN 447
H D + S+ S +S S D T I+ K S R +++ H +E +
Sbjct: 218 HKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAI--HGQEHN---- 271
Query: 448 KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 507
+ VAW + R+V A + + + +W A GDL VL GH V ++ HP +
Sbjct: 272 ----LLGVAWSRNSRFV-GAGSSDKNVYVWSA-TGDLRYVLPGHEGSVNHVDFHPHQD-I 324
Query: 508 LLSAGHDGLIIIWDI 522
+LS D I + ++
Sbjct: 325 ILSCSSDRTIFLGEL 339
>UNIPROTKB|A4RDD7 [details] [associations]
symbol:TIF34 "Eukaryotic translation initiation factor 3
subunit I" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CM001235 eggNOG:COG2319
GO:GO:0003743 GO:GO:0043581 KO:K03246 HAMAP:MF_03008
OrthoDB:EOG44QX8Q RefSeq:XP_003717931.1 ProteinModelPortal:A4RDD7
STRING:A4RDD7 EnsemblFungi:MGG_01013T0 GeneID:2674740
KEGG:mgr:MGG_01013 Uniprot:A4RDD7
Length = 341
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 77/322 (23%), Positives = 132/322 (40%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH A+ V F+ G++I + A D I +W A +G+ L T G G I + D + ++
Sbjct: 8 GHERALTQVKFNPDGDLIFSVAKDQHICVWFAHNGERLGTYHGHQGAIWTVDCDPTSTII 67
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD----GCIG 317
A G+ D TI++W ++T + + V F P +G L T G I
Sbjct: 68 ATGSADNTIKLWEIKTGRCLHTWE-FPTAVKRVEFSP---DGTRLLGVTEKRMGHLGTIV 123
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG 377
KLD+D + E M I + + +S ++ G D V Y
Sbjct: 124 VLDVKLDVDAEQNP--ERAM---TIVCDESKATVAGWSYLAKYIIAGHEDGSVSQYDAKN 178
Query: 378 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP 437
D L +++ + ++ +QWS F++ S+D TA K R + + + T
Sbjct: 179 GDQ-LHSVQIHDMGSEIRDLQWSQDRTYFITASKDKTA-----KLVTARDLEV-LKTYPA 231
Query: 438 HTKETSDE-TNKKIKVTMVAWDAS-DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 495
T S T KK V + A+ D +A F+ + + D + ++GH +
Sbjct: 232 DTPLNSAVITPKKDYVILGGGQAAMDVTTTSARQGKFEARFYHKIFEDEIGRVRGHFGPL 291
Query: 496 FVLESHPFDSRVLLSAGHDGLI 517
+ + P + + S G DG +
Sbjct: 292 NYVAAEP-NGKGYASGGEDGYV 312
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 145 (56.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ F G V+G D + +LW + L G +++ + +
Sbjct: 343 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 402
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A G+ D+T+R+W++ + + GH+G I + F P NG +LA+ +TDG + W
Sbjct: 403 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP---NG-RFLATGATDGRVLLW-- 456
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
DI H +M E ++ + FS G LA+GS D+ VR++
Sbjct: 457 ----DIG----HG-LMVGE-LKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 498
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 36/136 (26%), Positives = 55/136 (40%)
Query: 184 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR 243
L + H Y LR + GHL+ V C F + TG+ D ++LW +G +
Sbjct: 371 LWATDH-YQPLR---IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 426
Query: 244 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 303
G G I + LA G D + +W++ + L GH + + F +G
Sbjct: 427 GHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR---DG 483
Query: 304 FNYLASTSTDGCIGFW 319
LAS S D + W
Sbjct: 484 -EILASGSMDNTVRLW 498
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 43/172 (25%), Positives = 70/172 (40%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ F +++ ++D ++LW + L +G + + D
Sbjct: 301 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 360
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G D+ R+W P+ + GH + F P N NY+A+ S D + W
Sbjct: 361 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP---NS-NYVATGSADRTVRLW-- 414
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
D+ V +F G H L +FSP G FLATG+ D V ++
Sbjct: 415 --DVLNGNCVR----IFTGH--KGPIHSL--TFSPNGRFLATGATDGRVLLW 456
Score = 119 (46.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 223 ADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQTLAPI 281
+DD+L ++ + L L G SG + + +RN LL++ D T+R+W+LQT +
Sbjct: 280 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE-DGTVRLWSLQTFTCL 338
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV-MFNE 340
GH + F P G+ Y S D W T ++P+ +F
Sbjct: 339 VGYKGHNYPVWDTQFSPY---GY-YFVSGGHDRVARLWA---------TDHYQPLRIFAG 385
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+ A + C+ F P ++ATGS D VR++
Sbjct: 386 HL----ADVNCTRFHPNSNYVATGSADRTVRLW 414
Score = 98 (39.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+++WD NG+ V++ GH + L P + R L + DG +++WDI
Sbjct: 411 VRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDI 458
Score = 83 (34.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 446 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
T K + + + + R++ T + ++ +WD +G +V LKGHT+ V L D
Sbjct: 426 TGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DG 483
Query: 506 RVLLSAGHDGLIIIWDILSS 525
+L S D + +WD + +
Sbjct: 484 EILASGSMDNTVRLWDAVKA 503
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 50/214 (23%), Positives = 102/214 (47%)
Query: 202 GHLSAVFCVLFDKLGE-VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH + V V + G+ ++ +G+DD IK+W AR TL +++ + +
Sbjct: 138 GHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLES-PFQVTAVCFGDTGEQ 196
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ +G +D ++IW+++ A + L GH ITG++ P G +++ + + D + W
Sbjct: 197 VISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSP---EG-DFILTNAMDNTLRVWD 252
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
+ + V +F ++L ++SPG + +GS D HV ++ V++
Sbjct: 253 VRPYAPGERCV----KVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWD---VNT 305
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT 414
+ ++ H+ V+++ +S +SGS D T
Sbjct: 306 RRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKT 339
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V V F GE +++G D +K+W R +L LRG S I+ +++ + +
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAM 244
Query: 267 DKTIRIWNLQTLAP----ISVLVGHQ-GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
D T+R+W+++ AP + V GHQ + C G + + S S D + W
Sbjct: 245 DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP-GSDKITSGSADRHVYIW-- 301
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
D++ + ++ P N + FSP + +GS D + + ++D
Sbjct: 302 --DVNTRRILYKLP--------GHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
Score = 94 (38.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 32/130 (24%), Positives = 52/130 (40%)
Query: 192 SNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRA-RDGKLLATLRGCSGEI 249
SNL+ + L GH +F F GE++++ D I +W+ D + + + G SG +
Sbjct: 42 SNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAV 101
Query: 250 SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAS 309
+ + + DKT+ W++ T GH + V G L S
Sbjct: 102 MEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSR---RGQQLLCS 158
Query: 310 TSTDGCIGFW 319
S D I W
Sbjct: 159 GSDDRTIKIW 168
Score = 84 (34.6 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 40/164 (24%), Positives = 70/164 (42%)
Query: 407 VSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 466
V GSR G L+ S R I++ + H T + +VT V + + VI+
Sbjct: 146 VQGSRRGQQLLC--SGSDDRTIKI-WDARKKHAAHTLESP---FQVTAVCFGDTGEQVIS 199
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI--LS 524
+ ++KIWD ++ L+GH++ + + P +L +A D + +WD+ +
Sbjct: 200 G-GIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNA-MDNTLRVWDVRPYA 257
Query: 525 SKQRGYKWFHNIVEGQGEGALFDGKWSP--DGTTCALTDSYGHL 566
+R K F + E L WSP D T D + ++
Sbjct: 258 PGERCVKVFQGH-QHNFEKNLLRCAWSPGSDKITSGSADRHVYI 300
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 119 (46.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 276
++ G +D I+LW +R ++ + G I+ +A DN + LA+G+ D I +W+L
Sbjct: 86 DIFAVGYEDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVRLASGSRDTNIILWDLI 145
Query: 277 TLAPISVLVGHQGIITGVNFC-P-LEV-N--GFN----YLASTSTDGCIGFW 319
+ + L GH IT ++F P LE+ N G + +L +T D I W
Sbjct: 146 SEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVW 197
Score = 104 (41.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 348 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV 407
+ LCS+F PG + G+ D + ++ D S L + ++ H V S+Q V
Sbjct: 466 YALCSAFLPGDKIVVVGNKDGELEIF--DIASSTL-LDTIKAHDGPVWSLQVHPDGKSLV 522
Query: 408 SGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK-KIKVTMVAWDASDRWVIT 466
SGS D +A W ++ Q T P + T K + V + R +
Sbjct: 523 SGSADKSAKFWNFQVVQEEIPGTKRTT--PRLRLVHTRTLKVSDDILSVRFSPDARLLAV 580
Query: 467 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESH-PFDSRVLLSAGHDGLIIIWDI 522
A+ N +K++ FN L L + +++ VL +DS+++++ D + +W +
Sbjct: 581 ALLDN-TVKVF--FNDSLKLFLNLYGHKLPVLNMDISWDSKLIVTCSADKTVRLWGL 634
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 166 (63.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 104/417 (24%), Positives = 164/417 (39%)
Query: 163 KVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTG 222
+ H+ N + E G + I S K + LR GH S VF ++ + +++ +G
Sbjct: 193 RAHSVNNHAKPMEIDGEVD----IPSSKATVLR------GHESEVFICAWNPVSDLLASG 242
Query: 223 ADDLLIKLWRARD----GKLLATLRGCSGE-------ISDI-AID-NRN-ILLAAGTVDK 268
+ D ++W + G LR C E D+ ++D N N LLA G+ D
Sbjct: 243 SGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDG 302
Query: 269 TIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI 327
RIW LA S L H+G I + + G NY+ S D W
Sbjct: 303 FARIWTEDGNLA--STLGQHKGPIFALKW---NRKG-NYILSAGVDKTTIIWDAHTGEAK 356
Query: 328 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV 387
+ FH +A L + F A+ S D + V ++ G D P +
Sbjct: 357 QQFPFH------------SAPALDVDWQNNMTF-ASCSTDMCIHVCRL-GCDRP--VKTF 400
Query: 388 EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN 447
+ H+++V++I+W S + S S D T IW K Q I D+ H KE T
Sbjct: 401 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QEVCIH-DLQA---HNKEIY--TI 452
Query: 448 KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 507
K + + ++ + +F+ +++WD G L H V+ + P D R
Sbjct: 453 KWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSP-DGRY 511
Query: 508 LLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVE----GQGEGALFDGKWSPDGTTCAL 559
L S D + IW+ S Y+ I E +G+ G + DG+ C L
Sbjct: 512 LASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDKV---GASASDGSVCVL 565
>DICTYBASE|DDB_G0268084 [details] [associations]
symbol:wdr91 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0268084
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AAFI02000003
RefSeq:XP_647541.1 ProteinModelPortal:Q55FJ2
EnsemblProtists:DDB0233074 GeneID:8616348 KEGG:ddi:DDB_G0268084
OMA:MKQQLQF Uniprot:Q55FJ2
Length = 766
Score = 167 (63.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 62/231 (26%), Positives = 100/231 (43%)
Query: 193 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 252
N+ V H SA+ F G I + + D ++LW T+ C E++ +
Sbjct: 453 NIESQEVCTSHSSAITRCKFLSNGSKIASSSIDGTVRLWNVGFSSRQTTIY-CLSEVASL 511
Query: 253 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE-----VNGFNYL 307
+NR+ LL GT+D I+IWN T +G I T + F +E NG ++
Sbjct: 512 EWENRSKLLLCGTIDSKIKIWNSLT----DKAIGD--INTSIEFPRVEDIACNPNGNSFA 565
Query: 308 ASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD 367
S+ +G Y ++ KT E++ A I SF+ G L+TG D
Sbjct: 566 TSSINNGRTDGVVYTWNLRTLKT--------EEKLSSSGAVINSMSFNSTGTLLSTGCVD 617
Query: 368 HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+R++ + SP I + HS+++ S+Q+S R S +DG W
Sbjct: 618 GTIRIFDIKS-GSP--IAGWQAHSNEILSVQFSSDENRLYSLGKDGKLYQW 665
Score = 52 (23.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 479 AFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
+FN + L G N+ +L + S +L +GH G ++ D SS Q
Sbjct: 693 SFNHNQSSFLVGTNNKFALLYNIDQSSPILQISGHTGPVVTCDWNSSSQ 741
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 56/219 (25%), Positives = 97/219 (44%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS--DIAIDNRNIL 260
H S + C ++ + I+TG+ D LW G+LL + G SG++ D+A +
Sbjct: 157 HTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNT 216
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+G+ D+ IW++++ + GHQ + V F P G + +A+ S D +
Sbjct: 217 FVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPC---G-DAIATGSDDSSCRLYD 272
Query: 321 YKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
+ D +++ VF E ++F + FS G L G D+ V ++ D +
Sbjct: 273 MRADREVA--VFAKESIIFG---------VNSVDFSVSGRLLFAGYNDYTVNLW--DTLK 319
Query: 380 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
S L + H +KV +Q S +GS D T +W
Sbjct: 320 SERVCL-LYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 160 (61.4 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 39/122 (31%), Positives = 60/122 (49%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
LGH + V+C+ F G ++ +G+ D + LW R G+L+ +L S +S I L
Sbjct: 303 LGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGTL 362
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQG-IITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+ + + D IRIW+ T + LV +T V F P NG Y+ + + D CI W
Sbjct: 363 VVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSP---NG-RYILAFNLDSCIRLW 418
Query: 320 KY 321
Y
Sbjct: 419 DY 420
Score = 116 (45.9 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 76/284 (26%), Positives = 117/284 (41%)
Query: 242 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEV 301
LRG S I+ + I +A+ + D T RIW+ +T A I LVGH ++ + + P
Sbjct: 176 LRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWSP--D 233
Query: 302 NGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFL 361
+G LA+ S D I W ++ + + V + ++ G H G+ +
Sbjct: 234 SGT--LATGSDDKAIRLWD-RITAEPAHAVGTQDG--DDDAERGRTHGGTRISGASGIGV 288
Query: 362 ATGSGD----------HHVRVYKMDGVDSPLG-ILEVEEHSDKVDSIQWS---------- 400
G G HH VY + SP G IL + + V W
Sbjct: 289 GGGGGPARGTRRPLLGHHNYVYCL--AFSPKGNILASGSYDEAV--FLWDVRAGRLMRSL 344
Query: 401 HSHLRFVSG---SRDGTALIWYYKCSQWRFIRL-DMNT--CLPHTKETSDETNKKIKVTM 454
+H VSG RDGT ++ CS IR+ D T CL + E N VT
Sbjct: 345 PAHSDPVSGIDFCRDGTLVV---SCSTDGLIRIWDTATGQCL---RTLVHEDNPA--VTN 396
Query: 455 VAWDASDRWVITAINFNFQIKIWD--AFNGDLVQVLKGHTNEVF 496
V + + R+++ A N + I++WD A + + +GH N F
Sbjct: 397 VCFSPNGRYIL-AFNLDSCIRLWDYIAHPSKVKKTYQGHVNTGF 439
Score = 55 (24.4 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW-DILSSKQRGYKW 532
I +WD + ++VQ + H F ++ ++SAG D I+++ + L+S+++
Sbjct: 498 IVLWDVKSKEVVQKIAAHDGVCFWVD---VVGDTMVSAGKDARILVYRNTLNSRRQKTAV 554
Query: 533 FHNIVEG 539
N V+G
Sbjct: 555 ETNGVDG 561
Score = 52 (23.4 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 499 ESHPFDSRVLLSAGHDGLIIIWDILSSK 526
+ P + SA DG I++WD+ S +
Sbjct: 480 QRQPKQQAFVASASEDGHIVLWDVKSKE 507
Score = 45 (20.9 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 24/65 (36%), Positives = 25/65 (38%)
Query: 134 LRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMIS-SHKYS 192
LRSR S P SRS SH S S + RSR S SR S S S
Sbjct: 85 LRSRSRSRPTSRSRS-RSHSRSRSTSRSTDRRRS----RSRRDSSSRSRSRSRSRSESRS 139
Query: 193 NLRQH 197
R H
Sbjct: 140 RSRSH 144
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GHLS V CV F + TG+ D ++LW G+ + + G G +S +A
Sbjct: 529 VFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACG 588
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
LA+G+VD I IW+L + ++ L+ H +T + F +G LA+ D +
Sbjct: 589 RYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSR---DG-TVLAAAGLDNNLTL 644
Query: 319 WKY-KLDID-ISK--TVFH 333
W + K+ D IS TV H
Sbjct: 645 WDFHKVTEDYISNHITVSH 663
Score = 136 (52.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 43/175 (24%), Positives = 76/175 (43%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V+ F ++++ ++D I+LW + T RG + D+
Sbjct: 447 MGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYY 506
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ + DKT R+W + + V VGH + V F P N NY+A+ S+D + W
Sbjct: 507 FVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHP---NS-NYVATGSSDRTVRLWD 562
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
+ H+ G+ L +FS G +LA+GS DH++ ++ +
Sbjct: 563 NMTGQSVRLMTGHK----------GSVSSL--AFSACGRYLASGSVDHNIIIWDL 605
Score = 118 (46.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 47/167 (28%), Positives = 75/167 (44%)
Query: 213 DKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI-DNRNILLAAGTVDKTIR 271
D L E+ AD + +++ R G++ +L G +G + A N+LL+ D TIR
Sbjct: 418 DSLRELDKESAD-INVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSE-DSTIR 475
Query: 272 IWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 331
+W+L T + + GH + V F P +G+ Y S S D W D + + V
Sbjct: 476 LWSLLTWSCVVTYRGHVYPVWDVRFAP---HGY-YFVSCSYDKTARLWA--TDSNQALRV 529
Query: 332 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY-KMDG 377
F + + + C F P ++ATGS D VR++ M G
Sbjct: 530 FVGHL----------SDVDCVQFHPNSNYVATGSSDRTVRLWDNMTG 566
Score = 101 (40.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 446 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
T K V+ +A+ A R++ + + + I IWD NG LV L HT+ V + + D
Sbjct: 573 TGHKGSVSSLAFSACGRYLASG-SVDHNIIIWDLSNGSLVTTLLRHTSTVTTI-TFSRDG 630
Query: 506 RVLLSAGHDGLIIIWD 521
VL +AG D + +WD
Sbjct: 631 TVLAAAGLDNNLTLWD 646
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 177 (67.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 163 (62.4 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
A+G+ D+TIR W+L+ +S + G G + + F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNP 241
Score = 138 (53.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 136 (52.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+ D T+++W+L +S GH G + V F P E LAS S+D I FW
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSDRTIRFW 216
Score = 108 (43.1 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V + + +W+ +A + + +K+WD G ++ GHT V V+E HP + +L S
Sbjct: 150 VRCLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASG 207
Query: 512 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 570
D I WD L Q + +EG+ G + ++PDG C + L VYG
Sbjct: 208 SSDRTIRFWD-LEKFQ-----VVSCIEGE-PGPVRSILFNPDGC-CLYSGCQDSLRVYG 258
Score = 75 (31.5 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G LATG D V ++ ++ P I+ + H+ V+S++ + V+GS+ G+ +
Sbjct: 33 GRLLATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 418 W 418
W
Sbjct: 90 W 90
Score = 39 (18.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 6/32 (18%), Positives = 19/32 (59%)
Query: 877 EEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 908
E+ +I++P + ++ P+++ +P ++ M
Sbjct: 380 EDYNEIFQPKNSISRTPPRRSEPFPAPPEDDM 411
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 165 (63.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 59/226 (26%), Positives = 95/226 (42%)
Query: 195 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
R + GH+ V+ F V VTG+ D IKLW + G T+ C +D+ I
Sbjct: 399 RSRHTLTGHIGKVYTGKFINSNRV-VTGSHDRTIKLWDLQKGYCTRTIF-CFSSCNDLVI 456
Query: 255 -DNRNILLAAGTVDKTIRIWNLQTLAPISVLVG-HQGIITGVNFCPLEVNGFNYLASTST 312
LA+G VD ++R W+ P VL H+G IT + P N + + S
Sbjct: 457 LGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSPTNTN---QILTNSR 513
Query: 313 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
D + + D +T F +P R G + +S+SP G ++A+GS D + +
Sbjct: 514 DHTLKIIDIRT-FDTIRT-FKDP-----EYRNG-LNWTKASWSPDGRYIASGSIDGSICI 565
Query: 373 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ + + +V + V WS F+S +D + W
Sbjct: 566 WDATNGKTVKVLTKVHNNGSSVCCCSWSPLANIFISADKDKNIIQW 611
Score = 142 (55.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S ++C+ F+ +G ++ TG D +K+W G+ +TL G S I ++ + +
Sbjct: 322 GHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESI 381
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQG-IITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ D + R+WN + L GH G + TG F +N N + + S D I W
Sbjct: 382 LGTSNDNSARLWNTELGRSRHTLTGHIGKVYTG-KF----INS-NRVVTGSHDRTIKLWD 435
Query: 321 YKLDIDISKTVF 332
+ ++T+F
Sbjct: 436 LQKGY-CTRTIF 446
Score = 68 (29.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/99 (22%), Positives = 41/99 (41%)
Query: 474 IKIWDAFNGDLVQVLKG-HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKW 532
++ WD+ G+ QVL H ++ + + P ++ +L+ D + I DI R +
Sbjct: 473 VRFWDSNAGEPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDI-----RTFDT 527
Query: 533 FHNIVEGQGEGAL--FDGKWSPDGTTCALTDSYGHLLVY 569
+ + L WSPDG A G + ++
Sbjct: 528 IRTFKDPEYRNGLNWTKASWSPDGRYIASGSIDGSICIW 566
Score = 51 (23.0 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 474 IKIWDAFNGDLVQVLKG--HTNEV-FVLESHPFDSRVLLSAGHDGLIIIWDILSSK 526
+KI D D ++ K + N + + S D R + S DG I IWD + K
Sbjct: 517 LKIIDIRTFDTIRTFKDPEYRNGLNWTKASWSPDGRYIASGSIDGSICIWDATNGK 572
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 164 (62.8 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 91/378 (24%), Positives = 150/378 (39%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 181 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 240
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 241 DVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA--STLGQHKGPIFALKW---NKKG-NY 294
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH +A L + F A+ S
Sbjct: 295 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF-ASCST 341
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 342 DMCIHVCRL-GCDRP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDT 396
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H+KE T K + + ++ + +F+ +++WD G +
Sbjct: 397 CVH-DLQA---HSKEIY--TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLH 450
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE----GQG 541
L H V+ + P D + L S D + IW+ S S Y+ I E +G
Sbjct: 451 TLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARG 509
Query: 542 EGALFDGKWSPDGTTCAL 559
+ G + DG+ C L
Sbjct: 510 DKV---GASASDGSVCVL 524
Score = 94 (38.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFN 339
+VL GH+ + + P+ + LAS S D W + + T V +
Sbjct: 177 TVLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 232
Query: 340 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQ 398
P N + ++ G LATGS D R++ DG + S LG +H + +++
Sbjct: 233 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLG-----QHKGPIFALK 287
Query: 399 WSHSHLRFVSGSRDGTALIW 418
W+ +S D T +IW
Sbjct: 288 WNKKGNYILSAGVDKTTIIW 307
Score = 86 (35.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + +F+ +++WD G + L H V+ + P D + L S D + IW+
Sbjct: 428 MLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNT- 485
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 571
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 486 ---QSG-SLVHSY---RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 526
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 138 (53.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH V+ F + +++G++D ++LW L + +G + + D++
Sbjct: 522 VGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHY 581
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
A + D+T R+W+ + P+ + GH + V+F P NG Y+ + S+D W
Sbjct: 582 FATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHP---NGC-YVFTGSSDKTCRMW- 636
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
D+ +V +F P + +C P G +L+TGS D + V+
Sbjct: 637 ---DVSTGDSVR----LFLGHTAPVISIAVC----PDGRWLSTGSEDGIINVW 678
Score = 122 (48.0 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 41/140 (29%), Positives = 63/140 (45%)
Query: 241 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
TL G SG + + N L +G+ DKT+R+W++ T + GH + V+F PL
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL- 578
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 360
G +Y A+ S D W D +F + N+ + C SF P G +
Sbjct: 579 --G-HYFATASHDQTARLWS--CDHIYPLRIFAGHL--ND--------VDCVSFHPNGCY 623
Query: 361 LATGSGDHHVRVYKMDGVDS 380
+ TGS D R++ + DS
Sbjct: 624 VFTGSSDKTCRMWDVSTGDS 643
Score = 105 (42.0 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 475 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFH 534
++WD GD V++ GHT V + P D R L + DG+I +WDI + K+
Sbjct: 634 RMWDVSTGDSVRLFLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDIGTGKRLKQ---- 688
Query: 535 NIVEGQGEGALFDGKWSPDG 554
+ G G+ A++ +S +G
Sbjct: 689 --MRGHGKNAIYSLSYSKEG 706
Score = 85 (35.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 49/175 (28%), Positives = 74/175 (42%)
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQ--TLAPISVLVGHQGIITGVNFCPLEV--NGFNY 306
D + D R + AAG D I+IW+L +L ++ + + C V +G Y
Sbjct: 473 DFSDDCR--IAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPT-CKTLVGHSGTVY 529
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERI--RPGNAHILCS-SFSPGGLFLAT 363
S S D KY L KTV + + + G+ H + SFSP G + AT
Sbjct: 530 STSFSPDN-----KYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFAT 584
Query: 364 GSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
S D R++ D + PL I H + VD + + + +GS D T +W
Sbjct: 585 ASHDQTARLWSCDHI-YPLRIFA--GHLNDVDCVSFHPNGCYVFTGSSDKTCRMW 636
Score = 39 (18.8 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 209 CVLFDKLGEVIVTGADDLLIKLWRARDGKLL 239
C+ F + G D IK+W + DG L
Sbjct: 471 CLDFSDDCRIAAAGFQDSYIKIW-SLDGSSL 500
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 148 (57.2 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 52/176 (29%), Positives = 82/176 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK-LLATLRGCSGEISDIAIDNRNI 259
+GH VF V E I++ ++D +LW ++D K + G + I D+
Sbjct: 400 IGHTRPVFGVSISPQKEFILSCSEDGFTRLW-SKDTKSTIVKYAGHNAPIWDVQFSPFGY 458
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
A + D+T R+W+++ AP+ V VGHQ + V+F P N YLA+ S+D W
Sbjct: 459 YFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHP---NAA-YLATGSSDHTTRMW 514
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
D+ TV +FN P +A LC S GL LA+ ++V+ +
Sbjct: 515 ----DVRTGGTVR----VFNAHHSPVSA--LC--MSADGLSLASADESGIIKVWDL 558
Score = 106 (42.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 46/182 (25%), Positives = 74/182 (40%)
Query: 204 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG---KLL---------ATLRGCSGEISD 251
LSAV C F + G D I L+ + + L+ ++L G + +
Sbjct: 349 LSAVNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFG 408
Query: 252 IAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 311
++I + + + + D R+W+ T + I GH I V F P G+ Y A+ S
Sbjct: 409 VSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPF---GY-YFATAS 464
Query: 312 TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVR 371
D W + + V H+ N+ + C SF P +LATGS DH R
Sbjct: 465 HDQTARLWDVEHAAPLRVFVGHQ----ND--------VDCVSFHPNAAYLATGSSDHTTR 512
Query: 372 VY 373
++
Sbjct: 513 MW 514
Score = 81 (33.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 475 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
++WD G V+V H + V L D L SA G+I +WD+ SS Q
Sbjct: 512 RMWDVRTGGTVRVFNAHHSPVSAL-CMSADGLSLASADESGIIKVWDLRSSNQ 563
Score = 75 (31.5 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 474 IKIWDAFNGDL-VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKW 532
IK+WD + + V +K H++ V+ L S +D+++L+S G D + WD+ Y+
Sbjct: 553 IKVWDLRSSNQHVSFVK-HSSIVYSL-SFSYDNKILVSGGADTDVNFWDLT------YR- 603
Query: 533 FHNIVEGQGEGALFDGK 549
+N+ +G+ LF+ K
Sbjct: 604 -NNLSDGEQSPLLFNFK 619
Score = 38 (18.4 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 20/79 (25%), Positives = 35/79 (44%)
Query: 120 LVPNSVK-VHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSG 178
L P +K + V++L S + SL++ + T V +HNT++ + +S
Sbjct: 307 LPPTKMKDIDYFVSLLESEQ------NSLILGKNATDPSV-FMYTMHNTLSAVNCAAFSD 359
Query: 179 PLSRFLM----ISSHKYSN 193
S F + S H YS+
Sbjct: 360 DASMFALGCADSSIHLYSS 378
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 164 (62.8 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 40/153 (26%), Positives = 67/153 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V C+ + G V+VTG D ++W R G+ + L G G + + +
Sbjct: 393 GHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHI 452
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A G+ D T +IW+L+ P+ + H +I+ V + E F L + S D W
Sbjct: 453 ATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKY-QQECGSF--LVTCSYDSTTKIWSN 509
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 354
K + H+ + + I P + +I +SF
Sbjct: 510 KTWQPLKTLQGHDNKVISVDIAPNSQYIATTSF 542
Score = 146 (56.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 57/226 (25%), Positives = 97/226 (42%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI------ 254
+G V F + +++T + L KLW D +L TLRG + + +A+
Sbjct: 258 VGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKA 317
Query: 255 DNRNIL-LAAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTST 312
D N++ +A+G D +++W I+ + GH ++ V F P +G +LA+
Sbjct: 318 DEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHP---SG-RFLATACY 373
Query: 313 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
D W D++ V H+ +P H C S+ G L TG D RV
Sbjct: 374 DSSWRLW----DLEQKTEVLHQ----EGHAKP--VH--CLSYHSDGSVLVTGGLDAFGRV 421
Query: 373 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ + + I+ +E H V + +S + +GS+D T IW
Sbjct: 422 WDLR---TGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIW 464
>CGD|CAL0002484 [details] [associations]
symbol:CDC4 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IGI] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin
ligase complex" evidence=IGI] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IGI] [GO:0044182 "filamentous growth
of a population of unicellular organisms" evidence=IMP] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0007126 "meiosis" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 166 (63.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 91/361 (25%), Positives = 157/361 (43%)
Query: 182 RFLMISSHKYSNLRQHYVNL-GHLSAVF-CVLFDKLGEVIVTGADDLLIKLWRARDGKLL 239
R ++++ + H +++ GH + V C+ D E +VTG DD I ++ + G+L+
Sbjct: 385 RKIIVNRWMDPKFKPHRISVSGHGNKVVTCLQHDD--EKVVTGVDDKCILIYSTQTGQLM 442
Query: 240 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 299
L G G + A+ L G+ D+T+R+WN++T + GH I ++
Sbjct: 443 KVLEGHEGGVW--ALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDIIHP 500
Query: 300 EVNGFN----------Y--LASTSTDGCIGFWKYKLDIDISKTVFH--EPVMFNE---RI 342
V G N Y L + S D I WK + +D S+ E N +
Sbjct: 501 AVIGKNQDGEDIVFPEYPLLITGSRDHNIHVWKLPV-VDDSQDYIETFEGEFDNPYLIAV 559
Query: 343 RPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS-H 401
G+ + S S G + +GS D VRV+ D +D ++ H D+V S H
Sbjct: 560 LSGHTQSV-RSISGYGNIIISGSYDSTVRVW--DLLDDGHCTHVLQGHLDRVYSTAIDFH 616
Query: 402 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 461
S F SGS D +W ++ + + + + + L + D+ + V+ A DA+
Sbjct: 617 SKTCF-SGSMDSNINVWNFETGELKKVLVG-HASLVGLLDLVDD----VLVSAAA-DAT- 668
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
++IWDA G+L LKGH + E H RV+ +G + ++ +W+
Sbjct: 669 ------------LRIWDAKTGELRSKLKGHGAAITCFE-HD-GLRVV--SGSEKMLKLWN 712
Query: 522 I 522
+
Sbjct: 713 V 713
>UNIPROTKB|Q5A9A6 [details] [associations]
symbol:CDC4 "Potential ubiquitin ligase F-box subunit"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IGI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IGI] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IGI] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 166 (63.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 91/361 (25%), Positives = 157/361 (43%)
Query: 182 RFLMISSHKYSNLRQHYVNL-GHLSAVF-CVLFDKLGEVIVTGADDLLIKLWRARDGKLL 239
R ++++ + H +++ GH + V C+ D E +VTG DD I ++ + G+L+
Sbjct: 385 RKIIVNRWMDPKFKPHRISVSGHGNKVVTCLQHDD--EKVVTGVDDKCILIYSTQTGQLM 442
Query: 240 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 299
L G G + A+ L G+ D+T+R+WN++T + GH I ++
Sbjct: 443 KVLEGHEGGVW--ALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDIIHP 500
Query: 300 EVNGFN----------Y--LASTSTDGCIGFWKYKLDIDISKTVFH--EPVMFNE---RI 342
V G N Y L + S D I WK + +D S+ E N +
Sbjct: 501 AVIGKNQDGEDIVFPEYPLLITGSRDHNIHVWKLPV-VDDSQDYIETFEGEFDNPYLIAV 559
Query: 343 RPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS-H 401
G+ + S S G + +GS D VRV+ D +D ++ H D+V S H
Sbjct: 560 LSGHTQSV-RSISGYGNIIISGSYDSTVRVW--DLLDDGHCTHVLQGHLDRVYSTAIDFH 616
Query: 402 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 461
S F SGS D +W ++ + + + + + L + D+ + V+ A DA+
Sbjct: 617 SKTCF-SGSMDSNINVWNFETGELKKVLVG-HASLVGLLDLVDD----VLVSAAA-DAT- 668
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
++IWDA G+L LKGH + E H RV+ +G + ++ +W+
Sbjct: 669 ------------LRIWDAKTGELRSKLKGHGAAITCFE-HD-GLRVV--SGSEKMLKLWN 712
Query: 522 I 522
+
Sbjct: 713 V 713
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 177 (67.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 164 (62.8 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
A+G+ D+TIR W+L+ +S + G G + V F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 138 (53.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 136 (52.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+ D T+++W+L +S GH G + V F P E LAS S+D I FW
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSDRTIRFW 216
Score = 109 (43.4 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V + + +W+ +A + + +K+WD G ++ GHT V V+E HP + +L S
Sbjct: 150 VRCLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASG 207
Query: 512 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 570
D I WD L Q + +EG+ G + ++PDG C + L VYG
Sbjct: 208 SSDRTIRFWD-LEKFQ-----VVSCIEGE-PGPVRSVLFNPDGC-CLYSGCQDSLRVYG 258
Score = 75 (31.5 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G LATG D V ++ ++ P I+ + H+ V+S++ + V+GS+ G+ +
Sbjct: 33 GRLLATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 418 W 418
W
Sbjct: 90 W 90
Score = 38 (18.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 5/25 (20%), Positives = 16/25 (64%)
Query: 877 EEVPDIYKPSDWLAEVVPKKAPYYP 901
E+ +I++P + ++ P+++ +P
Sbjct: 380 EDYNEIFQPKNSISRTPPRRSEPFP 404
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 177 (67.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 164 (62.8 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
A+G+ D+TIR W+L+ +S + G G + V F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 138 (53.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 136 (52.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+ D T+++W+L +S GH G + V F P E LAS S+D I FW
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSDRTIRFW 216
Score = 109 (43.4 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V + + +W+ +A + + +K+WD G ++ GHT V V+E HP + +L S
Sbjct: 150 VRCLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASG 207
Query: 512 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 570
D I WD L Q + +EG+ G + ++PDG C + L VYG
Sbjct: 208 SSDRTIRFWD-LEKFQ-----VVSCIEGE-PGPVRSVLFNPDGC-CLYSGCQDSLRVYG 258
Score = 75 (31.5 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G LATG D V ++ ++ P I+ + H+ V+S++ + V+GS+ G+ +
Sbjct: 33 GRLLATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 418 W 418
W
Sbjct: 90 W 90
Score = 38 (18.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 5/25 (20%), Positives = 16/25 (64%)
Query: 877 EEVPDIYKPSDWLAEVVPKKAPYYP 901
E+ +I++P + ++ P+++ +P
Sbjct: 380 EDYNEIFQPKNSISRTPPRRSEPFP 404
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 177 (67.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 164 (62.8 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
A+G+ D+TIR W+L+ +S + G G + V F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 138 (53.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 136 (52.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+ D T+++W+L +S GH G + V F P E LAS S+D I FW
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSDRTIRFW 216
Score = 109 (43.4 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V + + +W+ +A + + +K+WD G ++ GHT V V+E HP + +L S
Sbjct: 150 VRCLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASG 207
Query: 512 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 570
D I WD L Q + +EG+ G + ++PDG C + L VYG
Sbjct: 208 SSDRTIRFWD-LEKFQ-----VVSCIEGE-PGPVRSVLFNPDGC-CLYSGCQDSLRVYG 258
Score = 75 (31.5 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G LATG D V ++ ++ P I+ + H+ V+S++ + V+GS+ G+ +
Sbjct: 33 GRLLATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 418 W 418
W
Sbjct: 90 W 90
Score = 38 (18.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 5/25 (20%), Positives = 16/25 (64%)
Query: 877 EEVPDIYKPSDWLAEVVPKKAPYYP 901
E+ +I++P + ++ P+++ +P
Sbjct: 380 EDYNEIFQPKNSISRTPPRRSEPFP 404
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 140 (54.3 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 78/303 (25%), Positives = 122/303 (40%)
Query: 243 RGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN 302
+G I+ + LA G+ D + +W+L+ A VGH+ +IT V F PL
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPL--- 71
Query: 303 GFNYLASTSTDGCIGFW---------KYKLDIDISKTV-FHEPVMFNERIRPGNAHILCS 352
G N LAS S D I W ++K ++V F F + + +
Sbjct: 72 G-NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWN 130
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
+ L+ + H VR K SP G L V DK I W ++ + V+ D
Sbjct: 131 MYRQRFLY-SLYRHTHWVRCAKF----SPDGRLIVSCSEDKTIKI-WDTTNKQCVNNFSD 184
Query: 413 GTALIWYYKCSQWRFIRLDMN-TCLP-----HTKETSD-ETNKKIK--------VTMVAW 457
F+ + N TC+ HT + D NK ++ V V++
Sbjct: 185 FVGFA--------NFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236
Query: 458 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 517
S ++ITA + + +KI D G L+ L+GHT VF + S + S G D +
Sbjct: 237 HPSGNYLITASS-DGTLKILDLLEGRLIYTLQGHTGPVFTV-SFSKGGELFTSGGADAQV 294
Query: 518 IIW 520
++W
Sbjct: 295 LLW 297
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 64/258 (24%), Positives = 116/258 (44%)
Query: 132 NVLRSREYSGPLSRSLMISSHKTS--LLVPNS------VKVHNTVNVLRSREYSGPLSRF 183
+V+ S ++S PL L +S + L +P+ K H T V RS ++S +F
Sbjct: 61 DVITSVQFS-PLGNLLASASRDRTIRLWIPDKRGKSSEFKAH-TAPV-RSVDFSAD-GQF 116
Query: 184 LMISSHKYS----NL-RQHYV-NL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG 236
L +S S N+ RQ ++ +L H V C F G +IV+ ++D IK+W +
Sbjct: 117 LASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+ + G + +A + +A+ D T++IW+++ + H G + V+F
Sbjct: 177 QCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236
Query: 297 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP 356
P +G NYL + S+DG + LD+ + ++ ++ + SFS
Sbjct: 237 HP---SG-NYLITASSDGTLKI----LDLLEGRLIY--------TLQGHTGPVFTVSFSK 280
Query: 357 GGLFLATGSGDHHVRVYK 374
GG +G D V +++
Sbjct: 281 GGELFTSGGADAQVLLWR 298
Score = 123 (48.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 45/189 (23%), Positives = 80/189 (42%)
Query: 185 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG 244
M SS + L +++ GH +A+ V F G+ + TG+ D + LW R G
Sbjct: 1 MASSPEDPVLERYFK--GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVG 58
Query: 245 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGF 304
I+ + LLA+ + D+TIR+W S H + V+F +G
Sbjct: 59 HKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDF---SADG- 114
Query: 305 NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 364
+LAS S D I W ++ + +++ + + C+ FSP G + +
Sbjct: 115 QFLASASEDKSIKVWN----------MYRQRFLYS--LYRHTHWVRCAKFSPDGRLIVSC 162
Query: 365 SGDHHVRVY 373
S D ++++
Sbjct: 163 SEDKTIKIW 171
Score = 90 (36.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 59/210 (28%), Positives = 81/210 (38%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
D +I + + + IKIWD N V + +P + + SAG D + IW
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNP-NGTCIASAGSDHTVKIW 213
Query: 521 DILSSKQRGYKWFH----NIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKR 576
DI +K + H N V G S DGT L G L +Y L G
Sbjct: 214 DIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITA-SSDGTLKILDLLEGRL-IYTLQGHTG 271
Query: 577 PQ---NIPR--ELFFH--TDYRTLNRPNGLFEPTYDEVT--NLPP-HLMPPPFLVDLNG- 625
P + + ELF D + L E Y +V+ NL H PP L+D+
Sbjct: 272 PVFTVSFSKGGELFTSGGADAQVLLWRTNFDELNYKDVSKRNLKRLHFDSPPHLLDIYPR 331
Query: 626 TPYPPEVQRLVPGRENADDTELLPDITTND 655
TP+P E GR D E+ P + D
Sbjct: 332 TPHPHE------GR--IDTVEINPKLDVTD 353
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 164 (62.8 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 103/417 (24%), Positives = 164/417 (39%)
Query: 163 KVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTG 222
+ H+ N + E G + I S K + LR GH S VF ++ + +++ +G
Sbjct: 201 RAHSVNNHAKPMEIDGEVE----IPSSKATVLR------GHESEVFICAWNPVSDLLASG 250
Query: 223 ADDLLIKLWRARD----GKLLATLRGCSGE-------ISDI-AID-NRN-ILLAAGTVDK 268
+ D ++W + G LR C E D+ ++D N N LLA G+ D
Sbjct: 251 SGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDG 310
Query: 269 TIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI 327
RIW LA S L H+G I + + G NY+ S D W
Sbjct: 311 FARIWTEDGNLA--STLGQHKGPIFALKW---NRKG-NYILSAGVDKTTIIWDAHTGEAK 364
Query: 328 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV 387
+ FH +A L + F A+ S D + V ++ G D P +
Sbjct: 365 QQFPFH------------SAPALDVDWQNNTTF-ASCSTDMCIHVCRL-GCDRP--VKTF 408
Query: 388 EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN 447
+ H+++V++I+W S + S S D T IW K Q I D+ H KE T
Sbjct: 409 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QEVCIH-DLQA---HNKEIY--TI 460
Query: 448 KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 507
K + + ++ + +F+ +++WD G L H V+ + P D +
Sbjct: 461 KWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSP-DGKY 519
Query: 508 LLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVE----GQGEGALFDGKWSPDGTTCAL 559
L S D + IW+ S Y+ I E +G+ G + DG+ C L
Sbjct: 520 LASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDKV---GASASDGSVCVL 573
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 163 (62.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 91/378 (24%), Positives = 149/378 (39%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD-GKLLAT---LRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G +T LR C E N+
Sbjct: 173 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPSNK 232
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 233 DVTSLDWNSDGTLLATGSYDGFARIWTENGNLA--STLGQHKGPIFALKW---NKKG-NY 286
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH +A L + F A+ S
Sbjct: 287 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF-ASCST 333
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V ++ G D P + + H+++V++I+W S + S S D T IW K
Sbjct: 334 DMCIHVCRL-GCDRP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC- 389
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
++ H KE T K + + ++ + +F+ +++WD G
Sbjct: 390 -----VHNLQAHRKEIY--TIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTH 442
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE----GQG 541
L+ H V+ + P D + L S D + IW+ S S Y+ I E QG
Sbjct: 443 TLRKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNAQG 501
Query: 542 EGALFDGKWSPDGTTCAL 559
+ G + DG+ C L
Sbjct: 502 DKV---GASASDGSVCVL 516
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 141 (54.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 63/232 (27%), Positives = 96/232 (41%)
Query: 166 NTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGAD 224
N+ V++S G L + + + S L + L GH VF V FD + I +G+
Sbjct: 31 NSAAVVKSSGQDGTLVQAVP----RTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSM 86
Query: 225 DLLIKLWRARDG-KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 283
D I LW + L G G I D+ + + + + D T+ W++++ I
Sbjct: 87 DRSILLWNTYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRR 146
Query: 284 LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW--KYKLDIDISKTVFHEPVMFNER 341
+GH+ +I V + G L S S DG +G W + K ID +T P+ +
Sbjct: 147 YIGHEEVINSVE---ISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETEL--PITAVAQ 201
Query: 342 IRPGNAHILCSSFSPGGLFLATGSGDHHVR--VYKMDGVDSPLGILEVEEHS 391
GN FS GG+ A D + VY M G + LEV S
Sbjct: 202 SEAGN-----EVFS-GGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDS 247
Score = 121 (47.7 bits), Expect = 0.00068, P = 0.00068
Identities = 49/220 (22%), Positives = 97/220 (44%)
Query: 201 LGHLSAVFCVLFDKLG-EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+GH + V K G E++V+ +DD + +W R + + L I+ +A
Sbjct: 148 IGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLE-TELPITAVAQSEAGN 206
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+ +G +D I +W+++ A + + GH IT + P L S S D + W
Sbjct: 207 EVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSP----DSQTLLSNSFDSTVRTW 262
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPG-NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGV 378
+ + T H + + G +++ +S++P G +A GSGD V V+ D
Sbjct: 263 DIR---PFAPTNRH--IRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVW--DFK 315
Query: 379 DSPLGILEVEEHSDKVDSIQWS-HSHLRFVSGSRDGTALI 417
+ + ++ H V+ ++++ ++ VS S D ++
Sbjct: 316 TGKI-LYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLML 354
Score = 66 (28.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/138 (21%), Positives = 58/138 (42%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKE--TSDETN 447
H D + S++ S +S S D T W D+ P + T D
Sbjct: 234 HMDTITSLEVSPDSQTLLSNSFDSTVRTW------------DIRPFAPTNRHIRTYDGAP 281
Query: 448 KKIKVTMV--AWD-ASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD 504
++ ++ +W+ A D+ I A + + + +WD G ++ L GH V + P +
Sbjct: 282 VGLEKNLIRASWNPAGDK--IAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNN 339
Query: 505 SRVLLSAGHDGLIIIWDI 522
+++SA D +++ ++
Sbjct: 340 EPIIVSASSDRNLMLGEL 357
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 161 (61.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 61/239 (25%), Positives = 105/239 (43%)
Query: 202 GHLSAVFCVLF---DKLGEVIVTGADDLLIKLWR--ARDGKLLAT--LRGCSGEISDIAI 254
GH V V + D L V++T + D + LW + K+ A RG +G + IA+
Sbjct: 138 GHADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGSVDTIAV 197
Query: 255 DNRNILLAAGTVDKTIRIWNL-------QTLAPISVLVGHQGIITGVNFCPL-EVNGFNY 306
D +G+ DK ++IW+ + P + G+ PL ++G N
Sbjct: 198 DPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTEQMGLTRTPLMTLSGHNE 257
Query: 307 LAST-----STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFL 361
S+ + + C W + + + ++T + + ++ C S+SP L
Sbjct: 258 AVSSVLWMDADELCSASWDHTIRLWDAETGGQKSTLSGSKV------FNCISYSPLCRRL 311
Query: 362 ATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQW--SHSHLRFVSGSRDGTALIW 418
A+GS D HVR++ D L +L + H+ V +++W SH H + VSGS D +W
Sbjct: 312 ASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEH-QLVSGSLDNVVKLW 369
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 145 (56.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 56/187 (29%), Positives = 83/187 (44%)
Query: 202 GHLSAVFCVLFDKLGE-VIVTGADDLLIKLW----------RARDGKLL-----ATLRGC 245
GH +V + +L E +VTG+ D +KLW A DG L+ +T R
Sbjct: 419 GHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCH 478
Query: 246 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
+I+ +A+ + LLA G+ D+T ++W L + V GH+ + V F P +
Sbjct: 479 DKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTD----Q 534
Query: 306 YLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGGLFLATG 364
LA+ S DG I W + D KT H+ + A +L SS S G L L T
Sbjct: 535 VLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVAFVSRGAQLL-SSGSDGLLKLWTI 592
Query: 365 SGDHHVR 371
+ VR
Sbjct: 593 KSNECVR 599
Score = 127 (49.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNIL 260
H + V + FD ++ TG D +++W RG G + +A D +L
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
L + VD +IR+W+LQ + ++VL H +T ++F +G L+S CI W
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSE---DGHTMLSSGRDKICI-VWD 223
Query: 321 YKLDIDISKTV 331
+ + S+TV
Sbjct: 224 LR-SYETSRTV 233
Score = 72 (30.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW-DILSSKQ 527
+K+W + + V+ L H ++V+ L D + + G D II+W D+ ++Q
Sbjct: 587 LKLWTIKSNECVRTLDAHEDKVWGLHCSRLDDHAI-TGGSDSRIILWKDVTEAEQ 640
Score = 72 (30.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 455 VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR--VLLSAG 512
V + +D+ + TA + + IK+W + ++ +GH V + F SR LLS+G
Sbjct: 527 VQFSPTDQVLATA-SADGTIKLWALQDFSCLKTFEGHDASVLKVA---FVSRGAQLLSSG 582
Query: 513 HDGLIIIWDILSSK 526
DGL+ +W I S++
Sbjct: 583 SDGLLKLWTIKSNE 596
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 162 (62.1 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 89/378 (23%), Positives = 150/378 (39%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGE--------- 248
GH S VF ++ + +++ +G+ D ++W + G LR C E
Sbjct: 177 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVPSNK 236
Query: 249 -ISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ + ++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 237 DVTSLDWNSDGTLLAMGSYDGFARIWTENGNLA--STLGQHKGPIFALKW---NKKG-NY 290
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH +A L + F + G+
Sbjct: 291 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTFASCGT- 337
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 338 DMCIHVCRL-GCDLP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDA 392
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H+KE T K + + ++ + +F+ +++WD G
Sbjct: 393 CVH-DLQA---HSKEIY--TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTH 446
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE----GQG 541
L H V+ + P D + L S D + IW+ S S Y+ I E +G
Sbjct: 447 TLTKHQEPVYSIAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNARG 505
Query: 542 EGALFDGKWSPDGTTCAL 559
+ G + DG+ C L
Sbjct: 506 DKV---GASASDGSVCVL 520
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 110 (43.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 46/218 (21%), Positives = 90/218 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNIL 260
GH S V + F +++ A + +K+W + + T+ C + + +R ++
Sbjct: 412 GHRSDVRTLSFSSDNIAVLSAAAES-VKIWNRSTLQCIRTMP-CEYALCSFFVPGDRQVV 469
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ GT +++++L + + + H G + ++ P + GF + D + FW
Sbjct: 470 I--GTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSP-DQRGF---VTGGADKAVKFWD 523
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
++L D + T V RI + +L +SP LA D V+++ +D +
Sbjct: 524 FELVTDKNSTQKRLSVK-QTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKF 582
Query: 381 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
L + H V + SH +GS D IW
Sbjct: 583 ---FLSLYGHKLPVICMDISHDGALIATGSADRNVKIW 617
Score = 102 (41.0 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISD-IAIDNRNIL 260
GH +AV + +D+LG + +G+ D + +W + L L+G ++ + + RN+L
Sbjct: 105 GHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLL 164
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 294
+ +G D ++ W+L +VGH+ + G+
Sbjct: 165 VTSGK-DTMVKWWDLDNQHCFKTMVGHRTEVWGL 197
Score = 88 (36.0 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV LF + ++VT D ++K W + T+ G E+ + + + L
Sbjct: 147 GHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRL 206
Query: 262 AAGTVDKTIRIWNLQTLAPI 281
G D +R W++ L I
Sbjct: 207 ITGAADSELRAWDIAYLQEI 226
Score = 84 (34.6 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 473 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
+IK WDA + +Q L+GH E++ L P V+ SA HD + +W+
Sbjct: 655 KIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVV-SASHDKSLRLWE 702
Score = 81 (33.6 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQW-SHSHLRFV 407
++C S G +ATGS D +V+++ +D D + H D V +++ SHL F
Sbjct: 593 VICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFA---HDDSVMHLRFVPKSHLFFT 649
Query: 408 SGSRDGTALIW 418
+G +D W
Sbjct: 650 AG-KDHKIKQW 659
Score = 81 (33.6 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
VF L + G + A + + +W R G+ + L+G E++ + + LA G
Sbjct: 27 VFVTLRGEKGRYVAVPACEHVF-IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYE 85
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
D IR+++L + GH+ +T + + L G LAS S D + W
Sbjct: 86 DGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQL--GG--RLASGSKDTDVIIW 134
Score = 78 (32.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 25/113 (22%), Positives = 49/113 (43%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
V C+ G + G +D I+++ G+ T G ++ + D LA+G+
Sbjct: 68 VTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGGRLASGSK 127
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
D + IW++ + + L GH+ +T F + N L ++ D + +W
Sbjct: 128 DTDVIIWDVINESGLYRLKGHKDAVTQALF----LRERNLLVTSGKDTMVKWW 176
Score = 67 (28.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 451 KVTMVAWDAS-DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 509
K+ ++ D S D +I + + +KIW GD + L H + V L P S +
Sbjct: 590 KLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVP-KSHLFF 648
Query: 510 SAGHDGLIIIWD 521
+AG D I WD
Sbjct: 649 TAGKDHKIKQWD 660
Score = 59 (25.8 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 18/75 (24%), Positives = 34/75 (45%)
Query: 348 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILE-VEEHSDKVDSIQWSHSHLRF 406
+ LCS F PG + G+ ++++Y + + +LE + H + S+ S F
Sbjct: 455 YALCSFFVPGDRQVVIGTKTGNMQLYDLASGN----LLETIAAHDGALWSMSLSPDQRGF 510
Query: 407 VSGSRDGTALIWYYK 421
V+G D W ++
Sbjct: 511 VTGGADKAVKFWDFE 525
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 152 (58.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 39/136 (28%), Positives = 71/136 (52%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 258
V +GH ++V C+ G+++V+G+ D ++W +G+ L L G +I IA D R
Sbjct: 368 VLVGHQASVRCLAVH--GDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRR 425
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
I A G++D ++RIW+ T ++L GH ++ G L+++G + L + +DG +
Sbjct: 426 I--ATGSLDTSVRIWDPNTGQCHAILQGHTSLV-G----QLQMSG-DTLVTGGSDGSVRV 477
Query: 319 WKYKLDIDISKTVFHE 334
W I + H+
Sbjct: 478 WSLTRMAPIHRLAAHD 493
Score = 144 (55.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 48/175 (27%), Positives = 84/175 (48%)
Query: 145 RSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHL 204
RS+++ H+ S+ + VH + V S Y +R IS ++ LR GH
Sbjct: 366 RSVLVG-HQASV---RCLAVHGDIVV--SGSYD-TTARVWSISEGRF--LR---ALSGHF 413
Query: 205 SAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAG 264
S ++ + FD G I TG+ D +++W G+ A L+G + + + + + L+ G
Sbjct: 414 SQIYAIAFD--GRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSG-DTLVTGG 470
Query: 265 TVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
+ D ++R+W+L +API L H +T + F N N + S +DG + W
Sbjct: 471 S-DGSVRVWSLTRMAPIHRLAAHDNSVTSLQFD----N--NRIVSGGSDGRVKVW 518
Score = 132 (51.5 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 189 HKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSG 247
H Y ++ L GH+ V+ ++ ++V+G D +++W G+ + LRG +
Sbjct: 276 HVYDTNGENQKTLEGHVMGVWAMV--PWDNILVSGGCDREVRVWNMATGESIYLLRGHTS 333
Query: 248 EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYL 307
+ + + ++N ++ G+ D T+RIW+L+T SVLVGHQ + C L V+G + +
Sbjct: 334 TVRCLKMSDKNTAIS-GSRDTTLRIWDLRTGTCRSVLVGHQASVR----C-LAVHG-DIV 386
Query: 308 ASTSTDGCIGFW 319
S S D W
Sbjct: 387 VSGSYDTTARVW 398
Score = 81 (33.6 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 350 LCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG 409
L G L TG D VRV+ + + +P+ L H + V S+Q+ ++ R VSG
Sbjct: 455 LVGQLQMSGDTLVTGGSDGSVRVWSLTRM-APIHRLAA--HDNSVTSLQFDNN--RIVSG 509
Query: 410 SRDGTALIWYYKCSQ 424
DG +W + Q
Sbjct: 510 GSDGRVKVWCLRTGQ 524
Score = 79 (32.9 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 451 KVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLS 510
++ +A+D R + T + + ++IWD G +L+GHT+ V L+ L++
Sbjct: 415 QIYAIAFDG--RRIATG-SLDTSVRIWDPNTGQCHAILQGHTSLVGQLQ---MSGDTLVT 468
Query: 511 AGHDGLIIIWDI 522
G DG + +W +
Sbjct: 469 GGSDGSVRVWSL 480
Score = 63 (27.2 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
+++W + L H N V L+ FD+ ++S G DG + +W
Sbjct: 475 VRVWSLTRMAPIHRLAAHDNSVTSLQ---FDNNRIVSGGSDGRVKVW 518
Score = 46 (21.3 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 1044 ILWDNNERENLSPWDLEPPKEGKE--ATEPGGSLPV-EPEEIQELLYHP-RP 1091
I+ + R + W PP E E A G S + EP +++ HP RP
Sbjct: 548 IMSSRSGRTVMEVWSFSPPPEDTEFDAATIGASSSISEPPPVRDS--HPIRP 597
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 154 (59.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 37/120 (30%), Positives = 64/120 (53%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V V + ++I + + D ++LWRA DG+ +AT RG + +A + L+
Sbjct: 373 GHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLI 432
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G+ D T+++W++QT L GH + GV++ P +G + +AS D I W Y
Sbjct: 433 VSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAP---DG-SRVASGGKDKVIKLWAY 488
Score = 111 (44.1 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 45/165 (27%), Positives = 78/165 (47%)
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
LA+G+ D T+R+W+L T P GH+ + V++ P +G LAS G I W
Sbjct: 134 LASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAP---DG-KRLASGCKAGSIIIW- 188
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF-----LATGSGDHHVRVYKM 375
D + + P+ +++ HI C ++ P LA+ SGD R++
Sbjct: 189 ---DPETGQQK-GRPLSGHKK------HINCLAWEPYHRDPECRKLASASGDGDCRIW-- 236
Query: 376 DGVDSPLG--ILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
D LG ++ + H++ V +++W + L + S S+D T +W
Sbjct: 237 ---DVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTS-SKDRTVKMW 277
Score = 101 (40.6 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 22/95 (23%), Positives = 47/95 (49%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+I + +F+ +++W A +G + +GH V+ + + DSR+++S D + +W +
Sbjct: 389 LIASASFDKSVRLWRASDGQYMATFRGHVQAVYTV-AWSADSRLIVSGSKDSTLKVWSVQ 447
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 558
+ K + G + +F W+PDG+ A
Sbjct: 448 TKK------LAQELPGHAD-EVFGVDWAPDGSRVA 475
Score = 75 (31.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 38/154 (24%), Positives = 61/154 (39%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV + F G + +G+ D ++LW T G + ++ L
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRL 176
Query: 262 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 319
A+G +I IW+ +T L GH+ I + + P + LAS S DG W
Sbjct: 177 ASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIW 236
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 353
KL + H + +R G A ++ +S
Sbjct: 237 DVKLGQCLMNIAGHTNAV--TAVRWGGAGLIYTS 268
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 138 (53.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
N+L+ G+ DKT+R+WN + + I V GH G I V F F++ S S D +
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAK---KSFSFFVSGSGDRTLK 472
Query: 318 FWKYKLDIDISKTVFHEPVMFNER--IRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
W LD IS+ EP+ R + + I + + + TGS D ++++
Sbjct: 473 VWS--LD-GISEDS-EEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRL 528
Query: 376 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ + ++ ++ H ++ S+++S ++ S D T IW
Sbjct: 529 PDL---VHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Score = 129 (50.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 55/207 (26%), Positives = 90/207 (43%)
Query: 216 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 275
G I D+ I + + D + +T+ G S ++ +A+ + LL + + IR+W+L
Sbjct: 31 GSFIACACGDV-INIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
Query: 276 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF--H 333
+TL I GH+G + G+ C +G LA+ D + W +D F H
Sbjct: 90 ETLKCIRSWKGHEGPVMGMA-C--HASG-GLLATAGADRKVLVWD--VDGGFCTHYFRGH 143
Query: 334 EPVMFNERIRP-GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV-EEHS 391
+ V+ + P N +IL S GS D VRV+ ++ ++ L + E+H
Sbjct: 144 KGVVSSILFHPDSNKNILIS-----------GSDDATVRVWDLNAKNTEKKCLAIMEKHF 192
Query: 392 DKVDSIQWSHSHLRFVSGSRDGTALIW 418
V SI S L S RD +W
Sbjct: 193 SAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 128 (50.1 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 46/186 (24%), Positives = 85/186 (45%)
Query: 242 LRGCSGEISDIA-IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 300
L G + EI+D+ + + LA T + +R++++ T++ VL GH+ ++ ++ C +
Sbjct: 354 LVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTC-VS 412
Query: 301 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL- 359
+G + + S D + W I H N IL +F+
Sbjct: 413 SSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGH------------NGDILAVAFAKKSFS 460
Query: 360 FLATGSGDHHVRVYKMDGV--DS--PLGILE---VEEHSDKVDSIQWSHSHLRFVSGSRD 412
F +GSGD ++V+ +DG+ DS P+ + V H ++S+ + + +GS D
Sbjct: 461 FFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSED 520
Query: 413 GTALIW 418
TA IW
Sbjct: 521 RTASIW 526
Score = 121 (47.7 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 47/187 (25%), Positives = 86/187 (45%)
Query: 346 NAHILCSSFSPGGL-FLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD-KVDSIQWSHSH 403
N IL +F+ F +GSGD ++V+ +DG+ + EE + K S+ +H
Sbjct: 446 NGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISE-----DSEEPINLKTRSVVAAHDK 500
Query: 404 -LRFVSGSRDGTALIWYYK---CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDA 459
+ V+ +R+ + + + S WR LP K ++ V +
Sbjct: 501 DINSVAVARNDSLVCTGSEDRTASIWR---------LPDLVHVVTLKGHKRRIFSVEFST 551
Query: 460 SDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIII 519
D+ V+TA + +KIW +G ++ +GHT+ V + S D +S G DGL+ +
Sbjct: 552 VDQCVMTASG-DKTVKIWAISDGSCLKTFEGHTSSV-LRASFITDGTQFVSCGADGLLKL 609
Query: 520 WDILSSK 526
W++ +S+
Sbjct: 610 WNVNTSE 616
Score = 97 (39.2 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 197 HYVNLGHLSAVFCVLF--DKLGEVIVTGADDLLIKLW--RAR--DGKLLATLRGCSGEIS 250
HY GH V +LF D ++++G+DD +++W A+ + K LA + ++
Sbjct: 138 HYFR-GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVT 196
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQ------TLAPISVLVGHQGIITGVNF 296
IA+ + L + DK + +W+L T+A VL + +G F
Sbjct: 197 SIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPF 248
Score = 95 (38.5 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 31/125 (24%), Positives = 52/125 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI---DNRN 258
GH V + G ++ T D + +W G RG G +S I N+N
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKN 159
Query: 259 ILLAAGTVDKTIRIWNLQTLAP----ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 314
IL++ G+ D T+R+W+L ++++ H +T + L +G L S D
Sbjct: 160 ILIS-GSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSI---ALSEDGLT-LFSAGRDK 214
Query: 315 CIGFW 319
+ W
Sbjct: 215 VVNLW 219
Score = 59 (25.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 18/82 (21%), Positives = 39/82 (47%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW--DILSSKQRGY- 530
+K+W+ + + H ++V+ L + ++ + G D +I +W S K+ +
Sbjct: 607 LKLWNVNTSECIATYDQHEDKVWALAVGK-KTEMIATGGGDAVINLWHDSTASDKEDDFR 665
Query: 531 KWFHNIVEGQG-EGALFDGKWS 551
K I+ GQ E A+ D +++
Sbjct: 666 KEEEAILRGQELENAVLDAEYT 687
Score = 57 (25.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS-RVLLSAGH-DGLII 518
++++ A N +++++D VL GH V L++ S VL+ G D +
Sbjct: 371 EQFLAVATNLE-EVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVR 429
Query: 519 IWDILSSKQRGYKWFHN 535
+W+ S G HN
Sbjct: 430 LWNATSKSCIGVGTGHN 446
Score = 47 (21.6 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 8/49 (16%), Positives = 21/49 (42%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+++W+A + + V GH ++ + +S D + +W +
Sbjct: 428 VRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 145 (56.1 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ F G V+G D + +LW + L G +++ + +
Sbjct: 583 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 642
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A G+ D+T+R+W++ + + GH+G I + F P NG +LA+ +TDG + W
Sbjct: 643 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP---NG-RFLATGATDGRVLLW-- 696
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
DI H +M E ++ + FS G LA+GS D+ VR++
Sbjct: 697 ----DIG----HG-LMVGE-LKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 128 (50.1 bits), Expect = 0.00039, P = 0.00039
Identities = 36/136 (26%), Positives = 55/136 (40%)
Query: 184 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR 243
L + H Y LR + GHL+ V C F + TG+ D ++LW +G +
Sbjct: 611 LWATDH-YQPLR---IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 666
Query: 244 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 303
G G I + LA G D + +W++ + L GH + + F +G
Sbjct: 667 GHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR---DG 723
Query: 304 FNYLASTSTDGCIGFW 319
LAS S D + W
Sbjct: 724 -EILASGSMDNTVRLW 738
Score = 125 (49.1 bits), Expect = 0.00082, P = 0.00082
Identities = 43/172 (25%), Positives = 70/172 (40%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ F +++ ++D ++LW + L +G + + D
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 600
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G D+ R+W P+ + GH + F P N NY+A+ S D + W
Sbjct: 601 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP---NS-NYVATGSADRTVRLW-- 654
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
D+ V +F G H L +FSP G FLATG+ D V ++
Sbjct: 655 --DVLNGNCVR----IFTGH--KGPIHSL--TFSPNGRFLATGATDGRVLLW 696
Score = 119 (46.9 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 223 ADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQTLAPI 281
+DD+L ++ + L L G SG + + +RN LL++ D T+R+W+LQT +
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE-DGTVRLWSLQTFTCL 578
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV-MFNE 340
GH + F P G+ Y S D W T ++P+ +F
Sbjct: 579 VGYKGHNYPVWDTQFSPY---GY-YFVSGGHDRVARLWA---------TDHYQPLRIFAG 625
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+ A + C+ F P ++ATGS D VR++
Sbjct: 626 HL----ADVNCTRFHPNSNYVATGSADRTVRLW 654
Score = 98 (39.6 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+++WD NG+ V++ GH + L P + R L + DG +++WDI
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDI 698
Score = 83 (34.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 446 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
T K + + + + R++ T + ++ +WD +G +V LKGHT+ V L D
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DG 723
Query: 506 RVLLSAGHDGLIIIWDILSS 525
+L S D + +WD + +
Sbjct: 724 EILASGSMDNTVRLWDAVKA 743
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 145 (56.1 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ F G V+G D + +LW + L G +++ + +
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 643
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A G+ D+T+R+W++ + + GH+G I + F P NG +LA+ +TDG + W
Sbjct: 644 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP---NG-RFLATGATDGRVLLW-- 697
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
DI H +M E ++ + FS G LA+GS D+ VR++
Sbjct: 698 ----DIG----HG-LMVGE-LKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 128 (50.1 bits), Expect = 0.00039, P = 0.00039
Identities = 36/136 (26%), Positives = 55/136 (40%)
Query: 184 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR 243
L + H Y LR + GHL+ V C F + TG+ D ++LW +G +
Sbjct: 612 LWATDH-YQPLR---IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 667
Query: 244 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 303
G G I + LA G D + +W++ + L GH + + F +G
Sbjct: 668 GHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR---DG 724
Query: 304 FNYLASTSTDGCIGFW 319
LAS S D + W
Sbjct: 725 -EILASGSMDNTVRLW 739
Score = 125 (49.1 bits), Expect = 0.00083, P = 0.00083
Identities = 43/172 (25%), Positives = 70/172 (40%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ F +++ ++D ++LW + L +G + + D
Sbjct: 542 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 601
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G D+ R+W P+ + GH + F P N NY+A+ S D + W
Sbjct: 602 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP---NS-NYVATGSADRTVRLW-- 655
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
D+ V +F G H L +FSP G FLATG+ D V ++
Sbjct: 656 --DVLNGNCVR----IFTGH--KGPIHSL--TFSPNGRFLATGATDGRVLLW 697
Score = 119 (46.9 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 223 ADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQTLAPI 281
+DD+L ++ + L L G SG + + +RN LL++ D T+R+W+LQT +
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE-DGTVRLWSLQTFTCL 579
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV-MFNE 340
GH + F P G+ Y S D W T ++P+ +F
Sbjct: 580 VGYKGHNYPVWDTQFSPY---GY-YFVSGGHDRVARLWA---------TDHYQPLRIFAG 626
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+ A + C+ F P ++ATGS D VR++
Sbjct: 627 HL----ADVNCTRFHPNSNYVATGSADRTVRLW 655
Score = 98 (39.6 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+++WD NG+ V++ GH + L P + R L + DG +++WDI
Sbjct: 652 VRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDI 699
Score = 83 (34.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 446 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
T K + + + + R++ T + ++ +WD +G +V LKGHT+ V L D
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DG 724
Query: 506 RVLLSAGHDGLIIIWDILSS 525
+L S D + +WD + +
Sbjct: 725 EILASGSMDNTVRLWDAVKA 744
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 165 (63.1 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 50/156 (32%), Positives = 75/156 (48%)
Query: 218 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 277
V+ +G+DD ++LW G L TL G SG + +A LLA+G+ DKT+R+W+ T
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 278 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 337
+ L GH + V F P +G LAS S D + W + +T
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSP---DG-RLLASGSFDKTVRLWDPATG-SLQQT------- 816
Query: 338 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+R + + +FSP G LA+GS D VR++
Sbjct: 817 ----LRGHSDTVRSVAFSPDGRLLASGSFDKTVRLW 848
Score = 164 (62.8 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 41/118 (34%), Positives = 58/118 (49%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V V F G ++ +G+ D ++LW G L TLRG S + +A LL
Sbjct: 735 GHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLL 794
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
A+G+ DKT+R+W+ T + L GH + V F P +G LAS S D + W
Sbjct: 795 ASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSP---DG-RLLASGSFDKTVRLW 848
Score = 136 (52.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V V F G ++ +G+ D ++LW G L TLRG S + +A LL
Sbjct: 777 GHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLL 836
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
A+G+ DKT+R+W+ T L+ +G +T + F
Sbjct: 837 ASGSFDKTVRLWDPATGTLQQTLI-IKGTVTELQF 870
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 161 (61.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 90/378 (23%), Positives = 149/378 (39%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 176 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNK 235
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 236 DVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA--STLGQHKGPIFALKW---NKKG-NY 289
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH +A L + F A+ S
Sbjct: 290 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF-ASCST 336
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 337 DMCIHVCRL-GCDRP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDT 391
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H+KE T K + + ++ + +F+ +++WD G +
Sbjct: 392 CVH-DLQA---HSKEIY--TIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIH 445
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVE----GQG 541
L H V+ + P D + L S D + IW+ S Y+ I E +G
Sbjct: 446 TLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGTLVHSYRGTGGIFEVCWNARG 504
Query: 542 EGALFDGKWSPDGTTCAL 559
+ G + DG+ C L
Sbjct: 505 DKV---GASASDGSVCVL 519
Score = 96 (38.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFN 339
+VL GH+ + + P+ + LAS S D W + + T V +
Sbjct: 172 TVLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREG 227
Query: 340 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQ 398
P N + ++ G LATGS D R++ DG + S LG +H + +++
Sbjct: 228 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLG-----QHKGPIFALK 282
Query: 399 WSHSHLRFVSGSRDGTALIW 418
W+ +S D T +IW
Sbjct: 283 WNKKGNYILSAGVDKTTIIW 302
Score = 87 (35.7 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + +F+ +++WD G + L H V+ + P D + L S D + IW+
Sbjct: 423 MLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNT- 480
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 571
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 481 ---QSG-TLVHSY---RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 521
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 156 (60.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 54/202 (26%), Positives = 86/202 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 262
H V C F G ++T +DD + +W + G+LL L G G + L+A
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 263 AGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 322
+ + D +IR+W++ + VL GHQ + V+F P LAS D W
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSP----DSKQLASGGWDKRAIVW--- 137
Query: 323 LDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPL 382
++ + V H V + I+ S FSP LATGS D V ++ + +
Sbjct: 138 -EVQSGRRV-HLLVGHCDSIQS-------SDFSPTSDSLATGSWDSTVHIWDLRASTPVV 188
Query: 383 GILEVEEHSDKVDSIQWSHSHL 404
+E H+ + + +S S L
Sbjct: 189 SYHNLEGHTGNISCLCYSASGL 210
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 51/181 (28%), Positives = 79/181 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V F G +I + + D I+LW K L L+G + ++ + L
Sbjct: 66 GHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQL 125
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G DK +W +Q+ + +LVGH I +F P + LA+ S D + W
Sbjct: 126 ASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTS----DSLATGSWDSTVHIW-- 179
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP 381
D+ S PV+ + +I C +S GL LA+GS D + V+K + P
Sbjct: 180 --DLRAST-----PVVSYHNLEGHTGNISCLCYSASGL-LASGSWDKTICVWKPTTNNLP 231
Query: 382 L 382
L
Sbjct: 232 L 232
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 170 (64.9 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 50/190 (26%), Positives = 89/190 (46%)
Query: 186 ISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGC 245
I+S K + H N+ L VL G ++ TG +D + +W + +L G
Sbjct: 8 ITSWKLQEIVAHSSNVSSL-----VLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGH 62
Query: 246 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
+ + I ++ + AG++ ++R+W+L+ + L+GH+ I+ ++F P+ G
Sbjct: 63 TSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPM---G-E 118
Query: 306 YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS 365
YLAS S D I W D+ VF R + + C +FSP G +LA+ S
Sbjct: 119 YLASGSVDSNIKLW----DVRRKGCVF--------RYKGHTQAVRCLAFSPDGKWLASAS 166
Query: 366 GDHHVRVYKM 375
D V+++ +
Sbjct: 167 DDSTVKLWDL 176
Score = 164 (62.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 49/175 (28%), Positives = 78/175 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH SAV C+ F+ E +V G+ ++LW K+L TL G IS + L
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 120
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G+VD I++W+++ + GH + + F P +G +LAS S D + W
Sbjct: 121 ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSP---DG-KWLASASDDSTVKLW-- 174
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
D+ K + F N F P LA+GS D V+++ ++
Sbjct: 175 --DLIAGKMITE----FTSHTSAVNV----VQFHPNEYLLASGSADRTVKLWDLE 219
Score = 147 (56.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 28/97 (28%), Positives = 50/97 (51%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV C+ F G+ + + +DD +KLW GK++ + ++ + LL
Sbjct: 145 GHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLL 204
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
A+G+ D+T+++W+L+ I G G++ V F P
Sbjct: 205 ASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP 241
Score = 119 (46.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V +A+ +W+ +A + + +K+WD G ++ HT+ V V++ HP + +L S
Sbjct: 150 VRCLAFSPDGKWLASASD-DSTVKLWDLIAGKMITEFTSHTSAVNVVQFHP-NEYLLASG 207
Query: 512 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGE-GALFDGKWSPDGTTCALTDSYGHLLVYG 570
D + +WD+ + F+ I +GE G + ++PDG+ C + S L VYG
Sbjct: 208 SADRTVKLWDL--------EKFNMIGSSEGETGVVRSVLFNPDGS-CLYSGSENTLRVYG 258
Score = 84 (34.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 358 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 417
G LATG D V ++ V P I+ + H+ V IQ++ S R V+GS G+ +
Sbjct: 33 GRLLATGGEDCRVNIW---AVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRL 89
Query: 418 W 418
W
Sbjct: 90 W 90
Score = 43 (20.2 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 876 PEEVPDIYKPSDWLAEVVPKKAPYYP 901
PE+ +I++P ++ PK +P
Sbjct: 384 PEDYKEIFQPRSVISRTPPKTTEPFP 409
Score = 43 (20.2 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 1026 GTIEGKPSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKEA 1068
G I+ KP P S LG L N ER S E K+ EA
Sbjct: 314 GLIQDKPIPAPSSALG-TTLRRNYERPTTSCTGQEM-KQSSEA 354
>UNIPROTKB|G4MWF1 [details] [associations]
symbol:MGG_08345 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 EMBL:CM001232
KO:K03361 RefSeq:XP_003715718.1 EnsemblFungi:MGG_08345T0
GeneID:2678612 KEGG:mgr:MGG_08345 Uniprot:G4MWF1
Length = 1033
Score = 151 (58.2 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 56/229 (24%), Positives = 97/229 (42%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 266
+ C+ FD+ + I+TG+DD LI ++ GKL L G G + + + L +G+
Sbjct: 657 ITCLQFDE--DKIITGSDDQLIHVYDTNTGKLRQKLEGHEGGVWALQYEGNT--LVSGST 712
Query: 267 DKTIRIWNLQTLAPISVLVGHQGIITGVNFC-PLEVNGFN-----------YLASTSTDG 314
D+++R+W+++ V GH + + P EV + + S D
Sbjct: 713 DRSVRVWDIEKGLCTQVFYGHTSTVRCLQILMPTEVGSDTEGRPIMSPPKPLIITGSRDS 772
Query: 315 CIGFWKY-----KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 369
+ W+ + I + RI G+ H + + S L +GS D
Sbjct: 773 QLRVWRLPEAGSRRYIQTGPPANDAECPYFLRILQGHTHSV-RAISAHADTLVSGSYDCS 831
Query: 370 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
VRV+++ + + ++ HS KV S+ H R +SGS D IW
Sbjct: 832 VRVWRISTGEQ---LHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIW 877
Score = 75 (31.5 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 458 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 517
D D +++A + ++IWD NG +L HT + + H DSR ++S G + +
Sbjct: 899 DLRDERLVSAAA-DSTLRIWDPENGKCKSILTAHTAAITCFQ-H--DSRKVIS-GSEKTV 953
Query: 518 IIWDILSSK 526
+WDI + +
Sbjct: 954 KMWDIATGE 962
Score = 48 (22.0 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA-GHDGLIIIWDIL 523
+K+WD G+ ++ L + V+ ++ FD R ++A DGL I +IL
Sbjct: 953 VKMWDIATGECIEDLLTDLSGVWQVK---FDGRRCVAAVQRDGLTYI-EIL 999
Score = 39 (18.8 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1058 DLEPPKEGKEATEPGGSLPVEPEEIQELL 1086
D ++GK E G + + E+Q LL
Sbjct: 1000 DFGAVRDGKPREELGKRIVLNSSEVQRLL 1028
>CGD|CAL0000994 [details] [associations]
symbol:orf19.1791 species:5476 "Candida albicans" [GO:0016020
"membrane" evidence=IEA] [GO:0030685 "nucleolar preribosome"
evidence=IEA] [GO:0004860 "protein kinase inhibitor activity"
evidence=IEA] [GO:0070507 "regulation of microtubule cytoskeleton
organization" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071775 "regulation of cell cycle cytokinesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000198 EMBL:AACQ01000197 KO:K14830 eggNOG:NOG328772
RefSeq:XP_711439.1 RefSeq:XP_711456.1 ProteinModelPortal:Q59P13
STRING:Q59P13 GeneID:3646935 GeneID:3646959 KEGG:cal:CaO19.1791
KEGG:cal:CaO19.9357 Uniprot:Q59P13
Length = 491
Score = 125 (49.1 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 214 KLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIW 273
K G+ +++G++D I +WR +D + L+G +G+I+D+AI + + + D+TIR+W
Sbjct: 157 KTGKWLLSGSEDGKIIIWRTKDWETFGILKGHTGKINDLAIHPSGRVAISVSQDQTIRLW 216
Query: 274 NLQTLAPISVL 284
NL T ++L
Sbjct: 217 NLMTAKKAAIL 227
Score = 105 (42.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 30/111 (27%), Positives = 56/111 (50%)
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
+W+++ + +I IW + + +LKGHT ++ L HP RV +S D I +W+
Sbjct: 160 KWLLSGSE-DGKIIIWRTKDWETFGILKGHTGKINDLAIHP-SGRVAISVSQDQTIRLWN 217
Query: 522 ILSSKQRGYKWFHNIVEGQGE-GALFDG-KWSPDGT-TCALTDSYGHLLVY 569
++++K+ ++G+ G + D KWSPD + L +L+Y
Sbjct: 218 LMTAKKAAILK----IKGKDHLGQVGDFVKWSPDSKGSFFLIGMLNQILIY 264
Score = 85 (35.0 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 475 KIWDAFNGDLVQ--VLKGHTNEV----FVLE-SHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
K+WD+ L+ L+GHTN + F+ + S D L+S DG I+IW++L Q
Sbjct: 341 KVWDSKPEQLIADFTLRGHTNRIKGISFIQDNSETHDIPYLVSVSSDGRIVIWNLLLKDQ 400
Score = 69 (29.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
L G+ D+ IRI++LQ + L+ H G IT + F
Sbjct: 90 LVTGSNDEHIRIYDLQKRKELGTLLSHNGTITSLKF 125
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 167 (63.8 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 48/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + +W + +L G + I + I +
Sbjct: 17 VAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G +++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPY---G-SFVASGSLDTDIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
+ I K H + +R C FSP G +LA+ + DH V+++ +
Sbjct: 133 DVRRKGCIFKYKSH-----TQAVR-------CLRFSPDGKWLASAADDHTVKLWDL 176
Score = 45 (20.9 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 847 EGVNLEP--PKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAP-YYPQM 903
E V +EP K + + +Q LPKQ +PE +P + +P+ P P
Sbjct: 408 EDVLIEPITAKEAVKPNQPVEVQTPLPKQELPET---FQRPPIASSTPMPRAEPSVIPAA 464
Query: 904 GDEVMFFKQGYQKYVDAVRSKGIYELS 930
+E + K ++ A++++ EL+
Sbjct: 465 RNEPIGLKAS--DFLPALKNQSQAELT 489
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 876 PEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 908
PE+ +I++P + ++ P +P ++V+
Sbjct: 379 PEDYKEIFQPRNAISRTPPHINEPFPAPPEDVL 411
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 155 (59.6 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 60/219 (27%), Positives = 99/219 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG--CSGEISDIAIDNRNI 259
GH V V F K G+ + TG++D +K+W D K R CS ++ + +
Sbjct: 74 GHKGNVTGVGFQKEGKWMYTGSEDGTVKIW---DLKAPGCQRDYECSAPVNTVVLHPNQA 130
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L +G + +IR+W+L + LV G + G+ + +G +AS + C W
Sbjct: 131 ELISGDQNGSIRVWDLISNTCSRELVP-DGEV-GITSLTISSDGGLVVASNTKGKCF-VW 187
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
+ D D S+ EP+ ++I NA IL + FSP LAT S DH V+++ +
Sbjct: 188 RLGED-DTSR---FEPL---QKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKFN 240
Query: 380 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ + H V +S+ V+GS D + +W
Sbjct: 241 V---VQTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLW 276
Score = 87 (35.7 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 216 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGE--ISDIAIDNRNILLAAGTVDKTIRIW 273
G ++ T + D IK W G ++ C GE I+ + I + + +AA +T R++
Sbjct: 3 GIILATASYDHTIKFWDPPSGGCYRSI-DC-GEFHINRLEITHDKLYIAAAGNPQT-RLF 59
Query: 274 NLQTL--APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 322
+ T +P GH+G +TGV F + G ++ + S DG + W K
Sbjct: 60 EVNTNNNSPAMSFDGHKGNVTGVGF---QKEG-KWMYTGSEDGTVKIWDLK 106
Score = 80 (33.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 27/102 (26%), Positives = 45/102 (44%)
Query: 421 KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 480
KC WR D + P K + N I T+ + D ++ + + +KIW+
Sbjct: 183 KCFVWRLGEDDTSRFEPLQK--IEAHNAPILKTLFSPDTK---LLATCSADHTVKIWNTK 237
Query: 481 NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
++VQ L GH V+ + DS L++ D L +WD+
Sbjct: 238 KFNVVQTLNGHQRWVWDC-AFSNDSAYLVTGSSDHLSRLWDL 278
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 163 (62.4 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 66/258 (25%), Positives = 114/258 (44%)
Query: 124 SVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPN----SVKVHNTVNVLRSREYSGP 179
SV +H T + + Y+G S+ + +H+T LV + V V R + +
Sbjct: 20 SVDLHPTEPWMLASLYNG----SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR-KNWVVT 74
Query: 180 LSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR-ARDGKL 238
+ + I Y+ L + ++ H + C+ I+T +DD+LIKLW +
Sbjct: 75 GADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSC 134
Query: 239 LATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFC 297
G + + I I+ + N A+ ++D+TI++W L + +P L GH+ GVN
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE---KGVNCI 191
Query: 298 PLEVNGFN-YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA-HILCSSFS 355
G YL S + D + W Y+ +KT P G+A ++ C++F
Sbjct: 192 DYYSGGDKPYLISGADDRLVKIWDYQ-----NKTCVQTP--------EGHAQNVSCATFH 238
Query: 356 PGGLFLATGSGDHHVRVY 373
P + TGS D VR++
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 113 (44.8 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 26/102 (25%), Positives = 45/102 (44%)
Query: 195 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
++ ++ GH AV F+ G +T D I+LW G L+ T + E+ D+ +
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHV 68
Query: 255 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
+ N + D+ + W++ T I GH G + V F
Sbjct: 69 TSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKF 110
Score = 90 (36.7 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 440 KETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLE 499
+E SD + + ++ D + + A + +++ D G+L+QV KGH ++ F +
Sbjct: 177 REMSDNLGQPVNCISISNDGN---CVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTD 233
Query: 500 SHPFDSRV-LLSAGHDGLIIIWDILSSKQRGYKWFHNIV 537
+S ++ DGL+ WD++ +K H++V
Sbjct: 234 CCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLV 272
Score = 53 (23.7 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 477 WDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
WD + ++ + H V + HP + +L++ DG I +W
Sbjct: 255 WDLVDAKVLSKFRAHDLVVTSVSYHPKED-CMLTSSVDGTIRVW 297
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 21/72 (29%), Positives = 30/72 (41%)
Query: 351 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE-H---SDKVDSIQWSHSHLRF 406
C S S G + G D +R+ +D L L+V + H S K D ++S
Sbjct: 189 CISISNDGNCVLAGCLDSTLRL--LDRTTGEL--LQVYKGHISKSFKTDCCL-TNSDAHV 243
Query: 407 VSGSRDGTALIW 418
+ GS DG W
Sbjct: 244 IGGSEDGLVFFW 255
Score = 38 (18.4 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 451 KVTMVAWDASDRWVITAINFNFQIKIWD 478
+V V ++ S V++A F+ +++WD
Sbjct: 104 EVNAVKFNDSSSVVVSA-GFDRSLRVWD 130
>UNIPROTKB|F1NIY8 [details] [associations]
symbol:F1NIY8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00550000075093 OMA:AAKDCTI EMBL:AADN02052957
EMBL:AADN02052958 IPI:IPI00601574 ProteinModelPortal:F1NIY8
Ensembl:ENSGALT00000002170 Uniprot:F1NIY8
Length = 364
Score = 164 (62.8 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
+GH + V C+ G+ + TG + LI +W A K L T G +S ++
Sbjct: 139 MGHTAHVLCIAISSDGKYLATGDRNKLILIWEAATCKRLYTFTGHRDAVSGLSFRKGTYQ 198
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
L + + D+++++WN++ A + L GHQ +ITG++ E + S DG + FWK
Sbjct: 199 LYSASHDRSVKVWNVEENAYVETLFGHQDVITGMDSLSREC----CVTSGGRDGTVRFWK 254
Score = 38 (18.4 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 7/40 (17%), Positives = 17/40 (42%)
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 526
+ GH + ++ + ++S DG + +W + K
Sbjct: 262 IFYGHQGSIDCIQL--INEEHMVSGADDGSVALWGLAKKK 299
>FB|FBgn0034931 [details] [associations]
symbol:CG2812 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978
HSSP:P16649 GeneTree:ENSGT00550000074331 RefSeq:NP_611850.1
UniGene:Dm.11826 ProteinModelPortal:Q9W1G4 SMR:Q9W1G4
MINT:MINT-845989 STRING:Q9W1G4 PRIDE:Q9W1G4
EnsemblMetazoa:FBtr0072140 GeneID:37801 KEGG:dme:Dmel_CG2812
UCSC:CG2812-RA FlyBase:FBgn0034931 InParanoid:Q9W1G4 OMA:HRGSIYC
OrthoDB:EOG4QJQ3T PhylomeDB:Q9W1G4 GenomeRNAi:37801 NextBio:805473
ArrayExpress:Q9W1G4 Bgee:Q9W1G4 Uniprot:Q9W1G4
Length = 348
Score = 156 (60.0 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 55/202 (27%), Positives = 88/202 (43%)
Query: 222 GADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPI 281
GA D I + G G +G I + N N + +G+ D+TIR W+L+ +
Sbjct: 156 GAGDCKIYITDCGTGTPFQAYSGHTGHILSLYSWN-NAMFVSGSQDQTIRFWDLRVNVSV 214
Query: 282 SVLVGHQ---GI-ITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 337
+ L + G+ + V ++ G L S D + DI + P+
Sbjct: 215 NTLDNDRKDGGLESSAVTAVCVDPTG-RLLVSGHADSSCTLY------DIRG---NRPI- 263
Query: 338 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDS 396
+R P A I C FSP ++ T S D+ +R+ + G + L + V EH DK +
Sbjct: 264 --QRFYPHTAEIRCVRFSPSAYYMLTCSYDNSIRLTDLQGDLAHELSSVVVAEHKDKAIT 321
Query: 397 IQWSHSHLRFVSGSRDGTALIW 418
I+W + F+S S D TA +W
Sbjct: 322 IRWHPTEFSFISTSADKTATLW 343
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 159 (61.0 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 91/378 (24%), Positives = 149/378 (39%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 177 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 236
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 237 DVTSLDWNSDGTLLAMGSYDGFARIWTENGNLA--STLGQHKGPIFALKW---NKKG-NY 290
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH +A L + F A+ S
Sbjct: 291 VLSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNMTF-ASCST 337
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 338 DMCIHVCRL-GCDHP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDA 392
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H+KE T K + + ++ + +F+ +++WD G
Sbjct: 393 CVH-DLQA---HSKEIY--TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTH 446
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE----GQG 541
L H V+ + P D + L S D + IW+ S S Y+ I E +G
Sbjct: 447 TLMKHQEPVYSVAFSP-DGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGIFEVCWNARG 505
Query: 542 EGALFDGKWSPDGTTCAL 559
+ G + DG+ C L
Sbjct: 506 DKV---GASASDGSVCVL 520
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 148 (57.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/176 (30%), Positives = 84/176 (47%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID----NR 257
GH V+ F G V+G D + +LW A D LR +G ++D+ N
Sbjct: 563 GHNYPVWDTQFSPYGYYFVSGGHDRVARLW-ATDH--YQPLRIFAGHLADVTCTRFHPNS 619
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
N + A G+ D+T+R+W++ + + GH+G I + F P NG +LA+ +TDG +
Sbjct: 620 NYI-ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP---NG-RFLATGATDGRVL 674
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
W DI H +M E ++ I FS G LA+GS D+ VR++
Sbjct: 675 LW------DIG----HG-LMVGE-LKGHTDTIYALRFSRDGEILASGSMDNTVRLW 718
Score = 134 (52.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 39/136 (28%), Positives = 56/136 (41%)
Query: 184 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR 243
L + H Y LR + GHL+ V C F I TG+ D ++LW +G +
Sbjct: 591 LWATDH-YQPLR---IFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFT 646
Query: 244 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 303
G G I +A LA G D + +W++ + L GH I + F +G
Sbjct: 647 GHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSR---DG 703
Query: 304 FNYLASTSTDGCIGFW 319
LAS S D + W
Sbjct: 704 -EILASGSMDNTVRLW 718
Score = 128 (50.1 bits), Expect = 0.00038, P = 0.00038
Identities = 44/172 (25%), Positives = 71/172 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ F +++ ++D ++LW + L +G + + D
Sbjct: 521 GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 580
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G D+ R+W P+ + GH +T F P N NY+A+ S D + W
Sbjct: 581 VSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP---NS-NYIATGSADRTVRLW-- 634
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
D+ V +F G H L +FSP G FLATG+ D V ++
Sbjct: 635 --DVLNGNCVR----IFTGH--KGPIHSL--AFSPNGRFLATGATDGRVLLW 676
Score = 121 (47.7 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 42/153 (27%), Positives = 68/153 (44%)
Query: 223 ADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQTLAPI 281
+DD+L ++ + L L G SG + + +RN LL+ D T+R+W+LQT +
Sbjct: 500 SDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSE-DGTVRLWSLQTFTCL 558
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV-MFNE 340
GH + F P G+ Y S D W T ++P+ +F
Sbjct: 559 VGYKGHNYPVWDTQFSPY---GY-YFVSGGHDRVARLWA---------TDHYQPLRIFAG 605
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+ A + C+ F P ++ATGS D VR++
Sbjct: 606 HL----ADVTCTRFHPNSNYIATGSADRTVRLW 634
Score = 93 (37.8 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 446 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
T K + +A+ + R++ T + ++ +WD +G +V LKGHT+ ++ L D
Sbjct: 646 TGHKGPIHSLAFSPNGRFLATGAT-DGRVLLWDIGHGLMVGELKGHTDTIYALRFSR-DG 703
Query: 506 RVLLSAGHDGLIIIWDILSS 525
+L S D + +WD + +
Sbjct: 704 EILASGSMDNTVRLWDAVKA 723
>UNIPROTKB|F1SS88 [details] [associations]
symbol:WDR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0043231 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00620000087755 EMBL:CU929537
Ensembl:ENSSSCT00000019583 Uniprot:F1SS88
Length = 123
Score = 135 (52.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/114 (32%), Positives = 48/114 (42%)
Query: 209 CVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGC-SGEISDIAIDNRNILLAAGTVD 267
CV + I+T D I W DG + L G SG I+ + I + G D
Sbjct: 10 CVCYHPEEFQIITSGTDRKIAYWEVFDGSGIRELDGSLSGSINGMDITPEGVHFVTGGND 69
Query: 268 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+++W+ V VGH G IT V P G Y+ S S DG I WKY
Sbjct: 70 HLVKVWDYNEGEVTHVGVGHSGNITRVRISP----GNEYIVSVSADGAILRWKY 119
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 158 (60.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 219 IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 278
I+TG D + ++ ++LATL+G S +++ + L+ + + D TIRIW++
Sbjct: 238 ILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNA 297
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMF 338
+ + V+ H+G +TG++ L G +YL S+S D +W + DI + V+
Sbjct: 298 SCVQVVRAHEGSVTGLS---LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLT 343
Query: 339 NERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
+ C+ F P GL TG+ D ++++ +
Sbjct: 344 KVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDL 380
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 145 (56.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 55/222 (24%), Positives = 88/222 (39%)
Query: 161 SVKVHNTVNVLRSREYSGPLSRFLMI-SSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVI 219
SV +H T++VL +SG + + +N+ + GH + + +
Sbjct: 296 SVALHPTLDVL----FSGGRDNCVRVWDMRTRANI---FEMKGHKGTILSLKSQNADPQV 348
Query: 220 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 279
++G+ D +KLW G ATL + + I + A G D I+ W +
Sbjct: 349 ISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADN-IKQWKCPDGS 407
Query: 280 PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFN 339
I L GH II + +N N L S +G I FW +K KT + ++
Sbjct: 408 FIKNLSGHNSIINA-----MALNADNVLVSGGDNGSISFWDWKTGYCFQKT---QSIVQP 459
Query: 340 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP 381
+ G A I +F G L T D ++ YK D +P
Sbjct: 460 GSLE-GEAGIFDMAFDKTGSRLITCEADKTIKFYKEDEDATP 500
Score = 135 (52.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 52/205 (25%), Positives = 90/205 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V + DK E TG+ D IK+W G+L TL G I + + +R+ L
Sbjct: 205 GHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYL 264
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGH-QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ D + W+L++ + GH QG+ + L+V L S D C+ W
Sbjct: 265 FSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDV-----LFSGGRDNCVRVWD 319
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GLF-LATGSGDHHVRVYKMDGV 378
+ +I + H+ + + + + + ++ S L+ LATG+ + +K GV
Sbjct: 320 MRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKK-GV 378
Query: 379 DSPLGILEVEEHS---DKVDSI-QW 399
S ++ +E+S D+I QW
Sbjct: 379 RSM--VIHEKEYSFATGAADNIKQW 401
Score = 124 (48.7 bits), Expect = 0.00058, P = 0.00058
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLE---SHPFDSRVL 508
V +A D S+ W T N IK+WD +G+L L GH + + LE HP+ L
Sbjct: 210 VRAIAVDKSNEWFATGSTDN-TIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPY----L 264
Query: 509 LSAGHDGLIIIWDILSSKQ-RGY 530
S G D ++ WD+ S+KQ R Y
Sbjct: 265 FSVGEDNKVLCWDLESNKQVRNY 287
Score = 113 (44.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 32/135 (23%), Positives = 64/135 (47%)
Query: 186 ISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGC 245
+ S+K +R +Y GH V+ V +V+ +G D +++W R + ++G
Sbjct: 278 LESNK--QVRNYY---GHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGH 332
Query: 246 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
G I + N + + +G++D T+++W+L T + L H+ GV + ++
Sbjct: 333 KGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHK---KGVRSMVIHEKEYS 389
Query: 306 YLASTSTDGCIGFWK 320
+ A+ + D I WK
Sbjct: 390 F-ATGAADN-IKQWK 402
Score = 108 (43.1 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
KL+ + G +G + IA+D N A G+ D TI++W+L + L GH I G
Sbjct: 198 KLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRG--- 254
Query: 297 CPLEVNGFN-YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 344
LEV+ + YL S D + W + + + H +++ + P
Sbjct: 255 --LEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHP 301
Score = 73 (30.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKW- 532
IK W +G ++ L GH + + + + VL+S G +G I WD + GY +
Sbjct: 398 IKQWKCPDGSFIKNLSGHNSIINAMALNA--DNVLVSGGDNGSISFWDW----KTGYCFQ 451
Query: 533 -FHNIVE-G--QGEGALFDGKWSPDGT---TC 557
+IV+ G +GE +FD + G+ TC
Sbjct: 452 KTQSIVQPGSLEGEAGIFDMAFDKTGSRLITC 483
Score = 66 (28.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+++WD + +KGH + L+S D +V+ S D + +WD+
Sbjct: 315 VRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVI-SGSMDTTVKLWDL 362
Score = 65 (27.9 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 361 LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
L +G D+ VRV+ M + I E++ H + S++ ++ + +SGS D T +W
Sbjct: 306 LFSGGRDNCVRVWDMR---TRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLW 360
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 142 (55.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 63/244 (25%), Positives = 112/244 (45%)
Query: 150 SSHKT-SLLVPNSVKVHNTV-----NVLRSREYSGPLSRFLMISSHK----YSNLRQHYV 199
S KT + VPN VK +TV +RS + F+ S K ++ RQ ++
Sbjct: 80 SRDKTVRIWVPN-VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFL 138
Query: 200 -NLG-HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+L H++ V C F G +IV+ +DD +KLW + + + G ++ +
Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPS 198
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+AA +D T+++W+++T + H + G++F P +G NYL + S+D +
Sbjct: 199 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP---SG-NYLITASSDSTLK 254
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK--M 375
LD+ + ++ + + G A + +FS G + A+G D V V+K
Sbjct: 255 I----LDLMEGRLLY---TLHGHQ---GPATTV--AFSRTGEYFASGGSDEQVMVWKSNF 302
Query: 376 DGVD 379
D VD
Sbjct: 303 DIVD 306
Score = 130 (50.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 193 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 252
+L +H+ GH AV CV F + + +G+ D + +W + G ++ +
Sbjct: 10 SLERHFK--GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 67
Query: 253 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 312
LLA+G+ DKT+RIW +V H + V+FC +G +++ + S
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS---DGQSFVTA-SD 123
Query: 313 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
D + W K +F ++ I + C+ FSP G + + S D V++
Sbjct: 124 DKTVKVWATHRQ----KFLFS----LSQHIN----WVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 373 Y 373
+
Sbjct: 172 W 172
Score = 94 (38.1 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 39/159 (24%), Positives = 62/159 (38%)
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
LAS S D C+ W K + H+ + C +FSP G LA+GS
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDA------------VTCVNFSPSGHLLASGSR 81
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D VR++ + V + H+ V S+ + FV+ S D T +W ++
Sbjct: 82 DKTVRIW-VPNVKGESTVFRA--HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFL 138
Query: 427 F-IRLDMN--TCLPHTKETSDETNKKIKVTMVAWDASDR 462
F + +N C + + + T+ WD S R
Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSR 177
Score = 75 (31.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 48/190 (25%), Positives = 76/190 (40%)
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
R +++A + + +K+WD + + V H V ++ HP + +AG D + +WD
Sbjct: 158 RLIVSASD-DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHP-SGTCIAAAGMDNTVKVWD 215
Query: 522 ILSSKQRGYKWFHNIVEGQGEGALFDGKW----SPDGTTCALTDSYGHLLVYGLGGFKRP 577
+ + + + H+ G G + S D T L G LL Y L G + P
Sbjct: 216 VRTHRLLQHYQLHSAAVN-GLSFHPSGNYLITASSDSTLKILDLMEGRLL-YTLHGHQGP 273
Query: 578 QN---IPR--ELFFH--TDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPP 630
R E F +D + + + + EVT +P PP L G P
Sbjct: 274 ATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVP---RPPATLASSMGNL--P 328
Query: 631 EVQRLVP-GR 639
EV VP GR
Sbjct: 329 EVDFPVPPGR 338
Score = 72 (30.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 353 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 412
SF P G +L T S D +++ +D ++ L + + H ++ +S + F SG D
Sbjct: 236 SFHPSGNYLITASSDSTLKI--LDLMEGRL-LYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Query: 413 GTALIW 418
++W
Sbjct: 293 EQVMVW 298
Score = 68 (29.0 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
VT V + S I A + +K+WD L+Q + H+ V L HP L++A
Sbjct: 190 VTYVDFHPSGT-CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLITA 247
Query: 512 GHDGLIIIWDILSSK 526
D + I D++ +
Sbjct: 248 SSDSTLKILDLMEGR 262
>FB|FBgn0022786 [details] [associations]
symbol:Hira "Hira" species:7227 "Drosophila melanogaster"
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0035041 "sperm chromatin decondensation"
evidence=IMP] [GO:0001673 "male germ cell nucleus" evidence=IDA]
[GO:0035042 "fertilization, exchange of chromosomal proteins"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0003682 GO:GO:0001673
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006336 GO:GO:0035042
KO:K11293 GeneTree:ENSGT00550000074919 CTD:7290 EMBL:AF031081
EMBL:AJ222709 EMBL:AF071881 EMBL:AY069414 EMBL:BT016167 PIR:A59246
RefSeq:NP_572401.2 UniGene:Dm.2141 ProteinModelPortal:O17468
SMR:O17468 IntAct:O17468 STRING:O17468 PaxDb:O17468
EnsemblMetazoa:FBtr0071070 GeneID:31680 KEGG:dme:Dmel_CG12153
FlyBase:FBgn0022786 InParanoid:O17468 OMA:KECKSER OrthoDB:EOG40VT4J
PhylomeDB:O17468 ChiTaRS:HIRA GenomeRNAi:31680 NextBio:774799
Bgee:O17468 GermOnline:CG12153 Uniprot:O17468
Length = 1047
Score = 166 (63.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 46/128 (35%), Positives = 70/128 (54%)
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA-PISVLVGHQGIITGVN 295
K TLRG G++ D+A ++ LA+ ++D T+ IW+ Q ++ L GH G++ GV+
Sbjct: 120 KCFYTLRGHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLKGHTGLVKGVS 179
Query: 296 FCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS 355
+ PL G +LAS S D I W ++ +S T+ EP F E G HIL S+S
Sbjct: 180 WDPL---G-RFLASQSDDRSIKIWN-TMNWSLSHTIT-EP--FEEC--GGTTHILRLSWS 229
Query: 356 PGGLFLAT 363
P G +L +
Sbjct: 230 PDGQYLVS 237
Score = 49 (22.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 689 IQTSHVHVLRSRANGESSAATEGTSPSGTAPTAQNK 724
+ TS V V + +G +++ + S +G+AP + +K
Sbjct: 1008 LDTSPVEVSPASTSGGAASTSPAASVAGSAPVSSSK 1043
Score = 47 (21.6 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 1068 ATEPGGSLPVEPEEIQELLYHPRPDE 1093
A++ SLP +P + ELL PR +E
Sbjct: 513 ASQRRQSLPFDPGQSNELLRTPRLEE 538
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 1307 TSTSRLRSVRQNGRAKRTNGRQSSS 1331
T+T+ S+ +G + T+G SSS
Sbjct: 939 TTTTASSSLSSSGSSSSTSGSGSSS 963
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 134 (52.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH+ V V+F I + + D +KLW R GK LA+LRG G + +A + LL
Sbjct: 358 GHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLL 417
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
+G+ D T++++ L+T + L GH + V++ P
Sbjct: 418 VSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSP 454
Score = 109 (43.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 431 DMNTCLPHTKETSDETNKKIK----VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
D + + KET N+ V V + R++ +A +F+ +K+W G +
Sbjct: 338 DFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASA-SFDKSVKLWCGRTGKYLA 396
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALF 546
L+GH V+ + + DSR+L+S D + +++ L +K Y + G G+ +F
Sbjct: 397 SLRGHVGPVYQV-AWSADSRLLVSGSADSTLKVFE-LKTKSLYYD-----LPGHGD-EVF 448
Query: 547 DGKWSPDGT 555
WSP+GT
Sbjct: 449 TVDWSPEGT 457
Score = 99 (39.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/159 (23%), Positives = 72/159 (45%)
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
LA+G+ D+T+RIW+++ P+ H+ + + + P +AS +G I W
Sbjct: 120 LASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATK----IASACKNGEICIWN 175
Query: 321 YKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
K I KT+ H+ + + +P + C LA+ D ++ ++ D V
Sbjct: 176 AKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCR-------LLASCGKDGNIFIW--DTVQ 226
Query: 380 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ + + H+ V ++W L + SGS+D T +W
Sbjct: 227 GTV-VRCLSGHTASVTCLRWGGEGLIY-SGSQDRTVKMW 263
Score = 93 (37.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 37/154 (24%), Positives = 65/154 (42%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH ++V C+ + G +I +G+ D +K+WRA DG + + G + I+ +A+ N + L
Sbjct: 235 GHTASVTCLRWGGEG-LIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLAL-NTDYAL 292
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ + R T+ Q + LE+ G L S S D + W
Sbjct: 293 RTSCFEPSKRCIKPDTVEEC------QKVAQTRYEAALEIAGGERLVSGSDDFTLFMWNP 346
Query: 322 K-LDIDISKTVFHEPVMFNERIRPGNAHILCSSF 354
K I++ H ++ P +I +SF
Sbjct: 347 KETKQSINRMTGHMQLVNQVVFSPDTRYIASASF 380
Score = 85 (35.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
V VAW A R +++ + + +K+++ L L GH +EVF ++ P ++V+ S
Sbjct: 405 VYQVAWSADSRLLVSG-SADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVV-SG 462
Query: 512 GHDGLIIIW 520
G D ++ +W
Sbjct: 463 GKDKVLKLW 471
Score = 82 (33.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 46/181 (25%), Positives = 73/181 (40%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V F G + +G+ D +++W L T + + IA +
Sbjct: 103 GHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKI 162
Query: 262 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNGF-NYLASTSTDGCIGFW 319
A+ + I IWN +T I L H+ IT + + P+ + LAS DG I W
Sbjct: 163 ASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIW 222
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGN-AHILCSSFSPGGLFLATGSGDHHVRVYKMD-G 377
+ TV R G+ A + C + GL + +GS D V++++ D G
Sbjct: 223 D-----TVQGTVV--------RCLSGHTASVTCLRWGGEGL-IYSGSQDRTVKMWRADDG 268
Query: 378 V 378
V
Sbjct: 269 V 269
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 159 (61.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 57/224 (25%), Positives = 99/224 (44%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH ++ + F + G I +G+ D ++LW +G L G ++ +AI +
Sbjct: 386 GHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYV 444
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
AAG++DK++R+W+L P+ L G H+ + V F P NG + L + S D I
Sbjct: 445 AAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSP---NGRD-LVTGSLDKTIKL 500
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGV 378
W+ + + + +L + +P ++ +GS D V+ +
Sbjct: 501 WELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFW----- 555
Query: 379 DSPLGI--LEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYY 420
D G L ++ H + V S+ S + F +GS D A IW Y
Sbjct: 556 DPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSY 599
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 61/225 (27%), Positives = 98/225 (43%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG----CSGE--ISDIAI 254
L H S V CV F G+ + TG + +++ G+ + L+ +G+ I +
Sbjct: 296 LQHESVVCCVRFSADGKYVATGCNRSA-QIFDVNTGEKVCVLQDDNADTTGDLYIRSVCF 354
Query: 255 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 314
LA G DK IR+W++ T GH+ I ++F +G +AS S D
Sbjct: 355 SPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFAR---DG-RTIASGSGDR 410
Query: 315 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
+ W ++ + TVF I G + + SP ++A GS D VRV+
Sbjct: 411 TVRLWD--IENGTALTVF--------TIEDG---VTTVAISPDTKYVAAGSLDKSVRVWD 457
Query: 375 MDGVDSPLGILEVEE-HSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+ P+ LE + H D V S+ +S + V+GS D T +W
Sbjct: 458 LTQ-GCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLW 501
Score = 138 (53.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 58/220 (26%), Positives = 95/220 (43%)
Query: 210 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS--DIAIDNRNILLAAGTVD 267
V F G+ + TGA+D I++W + G +I D A D R I A+G+ D
Sbjct: 352 VCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTI--ASGSGD 409
Query: 268 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI 327
+T+R+W+++ ++V G+ T V P Y+A+ S D + W D+
Sbjct: 410 RTVRLWDIENGTALTVFTIEDGVTT-VAISP----DTKYVAAGSLDKSVRVW------DL 458
Query: 328 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK-------MDGVDS 380
++ PV E + +FSP G L TGS D +++++ M S
Sbjct: 459 TQGC---PVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGS 515
Query: 381 PLG--ILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
G + E H D V S+ + + +SGS+D W
Sbjct: 516 KGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFW 555
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 122 (48.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 52/188 (27%), Positives = 80/188 (42%)
Query: 202 GHLSAVFCVLFDKLGEV-IVTGADDLLIKLWRARDGKLLATLRGCSG------------- 247
GH +V + +L E +VTG+ D +KLW + LL+ G G
Sbjct: 419 GHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEA-LLSKGTGHEGGPVFLQAQATQHC 477
Query: 248 ---EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGF 304
+I+ +A+ + LLA G+ D+T ++W L + GH+ + V F P++
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMD---- 533
Query: 305 NYLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGGLFLAT 363
LA+ S DG I W + D KT H+ + +L SS S G L L T
Sbjct: 534 QVLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVAFVSRGTQLL-SSGSDGLLKLWT 591
Query: 364 GSGDHHVR 371
+ VR
Sbjct: 592 IKNNECVR 599
Score = 120 (47.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 33/131 (25%), Positives = 59/131 (45%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNIL 260
H + V + FD ++ TG D +++W RG G + +A D +L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
L + D +IR+W+LQ + ++VL H +T + F +G L+S C+ W
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTF---SADGHTMLSSGRDKICV-IWD 223
Query: 321 YKLDIDISKTV 331
+ + ++TV
Sbjct: 224 LR-SLQATRTV 233
Score = 93 (37.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 41/169 (24%), Positives = 72/169 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF-VSGSRD 412
F G LF A+ + D +RV++M+ + + H+ V +I S F V+GS+D
Sbjct: 385 FRKGRLF-ASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQD 443
Query: 413 GTALIWYY-KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 471
T +W + + + + T +K I VA +D+ + T +
Sbjct: 444 CTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAVA--PNDKLLATGSQ-D 500
Query: 472 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
K+W L+ GH ++ ++ P D +VL +A DG I +W
Sbjct: 501 RTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMD-QVLATASADGTIKLW 548
Score = 87 (35.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGC-SGEISDIAIDNRNILLAAGTVDKTIRIWNL 275
+V+VT + LL+ W ++G + + + ++ +A D + LLA G D +R+W++
Sbjct: 79 KVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDV 138
Query: 276 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
G G++ V F P L S++ D I W
Sbjct: 139 VRCYGTHHFRGSPGVVHLVAFHPDPARLL--LFSSAADTSIRVW 180
Score = 79 (32.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW-DILSSKQ 527
+K+W N + V+ L H ++V+ L D R L A D +++W D+ ++Q
Sbjct: 587 LKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGAS-DSRVVLWKDVTEAEQ 640
Score = 67 (28.6 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 455 VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR--VLLSAG 512
V + D+ + TA + + IK+W + ++ +GH V + F SR LLS+G
Sbjct: 527 VQFSPMDQVLATA-SADGTIKLWALQDFSCLKTFEGHDASVLKVA---FVSRGTQLLSSG 582
Query: 513 HDGLIIIWDILSSK 526
DGL+ +W I +++
Sbjct: 583 SDGLLKLWTIKNNE 596
Score = 55 (24.4 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
D V+ A N +K++D Q+L GHT+ V L+ R+ S D I +W
Sbjct: 347 DSHVVVASNSPC-LKVFD-LQTSACQILHGHTDIVLALDVFR-KGRLFASCAKDQSIRVW 403
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 157 (60.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 88/375 (23%), Positives = 143/375 (38%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G N+
Sbjct: 227 DVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA--STLGQHKGPIFALKW---NKKG-NF 280
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH + + N CS+
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCST------------- 327
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V K+ G D P I + H+++V++I+W + S S D T IW K Q
Sbjct: 328 DMCIHVCKL-GQDRP--IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMK--QDN 382
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H KE T K + + ++ + +F+ +++WD G +
Sbjct: 383 CVH-DLQA---HNKEIY--TIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIH 436
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVEGQGEGAL 545
L H V+ + P D R L S D + IW+ + Y+ I E A
Sbjct: 437 TLTKHQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAG 495
Query: 546 FD-GKWSPDGTTCAL 559
G + DG+ C L
Sbjct: 496 DKVGASASDGSVCVL 510
Score = 93 (37.8 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 35/139 (25%), Positives = 57/139 (41%)
Query: 283 VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFNE 340
VL GH+ + + P+ + LAS S D W + T V +
Sbjct: 164 VLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQW 399
+ P N + ++ G LATGS D R++ DG + S LG +H + +++W
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLG-----QHKGPIFALKW 274
Query: 400 SHSHLRFVSGSRDGTALIW 418
+ +S D T +IW
Sbjct: 275 NKKGNFILSAGVDKTTIIW 293
Score = 90 (36.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 27/108 (25%), Positives = 47/108 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + +F+ +++WD G + L H V+ + P D R L S D + IW+
Sbjct: 414 MLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSFDKCVHIWNT- 471
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 571
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 472 ---QTG-ALVHSY---RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 131 (51.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 44/145 (30%), Positives = 68/145 (46%)
Query: 202 GHLSAVFCVLFDKLGEV-IVTGADDLLIKLW----------RARD-GKLL----ATLRGC 245
GH +V + +L E +VTG+ D +KLW A D G +L AT R
Sbjct: 416 GHTHSVGTICCSRLKETFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCH 475
Query: 246 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
+I+ +A+ + LLA G+ D+T ++W L + + GH+ + V F P++
Sbjct: 476 DKDINSVAVAPNDKLLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMD----Q 531
Query: 306 YLASTSTDGCIGFWKYKLDIDISKT 330
LA+ S DG I W + D KT
Sbjct: 532 VLATASADGTIKLWALQ-DFSCLKT 555
Score = 112 (44.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNIL 260
H + V + FD ++ TG D +++W RG G + + D +L
Sbjct: 105 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPARLL 164
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L + D TIR+W+LQ + ++V+ H +T + F +G L+S C+ W
Sbjct: 165 LFSSAADATIRMWSLQDQSCLAVMTAHYSAVTSLTF---SADGHTMLSSGRDKICV-IW 219
Score = 99 (39.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 41/169 (24%), Positives = 74/169 (43%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF-VSGSRD 412
F G LF A+ + D + +++M+ + + H+ V +I S F V+GS+D
Sbjct: 382 FRKGRLF-ASCAKDQSICIWRMNKAGRVACVAQGSGHTHSVGTICCSRLKETFLVTGSQD 440
Query: 413 GTALIWYY-KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 471
T +W + + D L + T +K I VA +D+ + T +
Sbjct: 441 CTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCHDKDINSVAVA--PNDKLLATGSQ-D 497
Query: 472 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
K+W + L+ + GH ++ ++ P D +VL +A DG I +W
Sbjct: 498 RTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMD-QVLATASADGTIKLW 545
Score = 96 (38.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGC-SGEISDIAIDNRNILLAAGTVDKTIRIWNL 275
+V+VT LL+ W R+G + + + ++ +A D + LLA G D +R+W++
Sbjct: 76 QVLVTATRALLLAQWAWREGSITRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDI 135
Query: 276 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
G G++ V F P L S++ D I W
Sbjct: 136 VRHYGTHHFRGSPGVVHLVTFHPDPARLL--LFSSAADATIRMW 177
Score = 81 (33.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW-DILSSKQ 527
+K+W N + V+ L H ++V+ L D R L A D +I+W D+ +Q
Sbjct: 586 VKLWTIKNNECVKTLDAHEDKVWGLHCSRLDDRALTGAS-DSCVILWKDVTEEEQ 639
Score = 71 (30.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 47/194 (24%), Positives = 82/194 (42%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVY--------KMDGVDSPLGILEVEE----HSDKVDS 396
I CS FL TGS D V+++ K DS +L+ + H ++S
Sbjct: 424 ICCSRLKE--TFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCHDKDINS 481
Query: 397 IQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVA 456
+ + + +GS+D TA +W LPH + + + + V
Sbjct: 482 VAVAPNDKLLATGSQDRTAKLW----------------ALPHCQLLGIFSGHRRGLWCVQ 525
Query: 457 WDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR--VLLS--AG 512
+ D+ + TA + + IK+W + ++ +GH V + F SR LLS +G
Sbjct: 526 FSPMDQVLATA-SADGTIKLWALQDFSCLKTFEGHDASVLKVV---FVSRGTQLLSRPSG 581
Query: 513 HDGLIIIWDILSSK 526
DGL+ +W I +++
Sbjct: 582 SDGLVKLWTIKNNE 595
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 126 (49.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 52/187 (27%), Positives = 80/187 (42%)
Query: 202 GHLSAVFCVLFDKLGEV-IVTGADDLLIKLW----------RARDG-----KLLATLRGC 245
GH +V + +L E +VTG+ D +KLW +G + AT R
Sbjct: 419 GHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCH 478
Query: 246 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 305
+I+ +A+ + LLA G+ D+T ++W L + GH+ + V F P++
Sbjct: 479 DKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMD----Q 534
Query: 306 YLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGGLFLATG 364
LA+ S DG I W + D KT H+ + +L SS S G L L T
Sbjct: 535 VLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVAFVSRGTQLL-SSGSDGLLKLWTI 592
Query: 365 SGDHHVR 371
+ VR
Sbjct: 593 KNNECVR 599
Score = 120 (47.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 33/131 (25%), Positives = 59/131 (45%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNIL 260
H + V + FD ++ TG D +++W RG G + +A D +L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
L + D +IR+W+LQ + ++VL H +T + F +G L+S C+ W
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTF---SADGHTMLSSGRDKICV-IWD 223
Query: 321 YKLDIDISKTV 331
+ + ++TV
Sbjct: 224 LR-SLQATRTV 233
Score = 92 (37.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 41/169 (24%), Positives = 72/169 (42%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF-VSGSRD 412
F G LF A+ + D +RV++M+ + + H+ V +I S F V+GS+D
Sbjct: 385 FRKGRLF-ASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQD 443
Query: 413 GTALIWYY-KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 471
T +W + + + + T +K I VA +D+ + T +
Sbjct: 444 CTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAVA--PNDKLLATGSQ-D 500
Query: 472 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
K+W L+ GH ++ ++ P D +VL +A DG I +W
Sbjct: 501 RTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMD-QVLATASADGTIKLW 548
Score = 87 (35.7 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGC-SGEISDIAIDNRNILLAAGTVDKTIRIWNL 275
+V+VT + LL+ W ++G + + + ++ +A D + LLA G D +R+W++
Sbjct: 79 KVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDV 138
Query: 276 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
G G++ V F P L S++ D I W
Sbjct: 139 VRCYGTHHFRGSPGVVHLVAFHPDPARLL--LFSSAADTSIRVW 180
Score = 79 (32.9 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW-DILSSKQ 527
+K+W N + V+ L H ++V+ L D R L A D +++W D+ ++Q
Sbjct: 587 LKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGAS-DSRVVLWKDVTEAEQ 640
Score = 67 (28.6 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 455 VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR--VLLSAG 512
V + D+ + TA + + IK+W + ++ +GH V + F SR LLS+G
Sbjct: 527 VQFSPMDQVLATA-SADGTIKLWALQDFSCLKTFEGHDASVLKVA---FVSRGTQLLSSG 582
Query: 513 HDGLIIIWDILSSK 526
DGL+ +W I +++
Sbjct: 583 SDGLLKLWTIKNNE 596
Score = 55 (24.4 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
D V+ A N +K++D Q+L GHT+ V L+ R+ S D I +W
Sbjct: 347 DSHVVVASNSPC-LKVFD-LQTSACQILHGHTDIVLALDVFR-KGRLFASCAKDQSIRVW 403
>UNIPROTKB|P57737 [details] [associations]
symbol:CORO7 "Coronin-7" species:9606 "Homo sapiens"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISS;IBA]
[GO:0015629 "actin cytoskeleton" evidence=IRD] [GO:0030036 "actin
cytoskeleton organization" evidence=IRD] [GO:0051015 "actin
filament binding" evidence=IRD] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 GO:GO:0005829 GO:GO:0005794
GO:GO:0000139 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016023
EMBL:CH471112 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 CTD:79585 HOGENOM:HOG000006535
HOVERGEN:HBG051080 OrthoDB:EOG49S65R EMBL:AK025674 EMBL:AK296807
EMBL:AC012676 EMBL:BC032732 EMBL:BC117289 EMBL:BC117291
IPI:IPI00027996 IPI:IPI00940326 RefSeq:NP_001188402.1
RefSeq:NP_001188408.1 RefSeq:NP_078811.3 UniGene:Hs.437957
UniGene:Hs.739021 ProteinModelPortal:P57737 SMR:P57737
STRING:P57737 PhosphoSite:P57737 DMDM:259016200 PaxDb:P57737
PRIDE:P57737 DNASU:79585 Ensembl:ENST00000251166
Ensembl:ENST00000537233 Ensembl:ENST00000572467 GeneID:79585
KEGG:hsa:79585 UCSC:uc002cwf.3 UCSC:uc010uxi.2
GeneCards:GC16M004405 GeneCards:GC16M004406 H-InvDB:HIX0012777
HGNC:HGNC:26161 HPA:HPA041657 MIM:611668 neXtProt:NX_P57737
PharmGKB:PA134910806 InParanoid:P57737 OMA:EVEFARC PhylomeDB:P57737
GenomeRNAi:79585 NextBio:68583 ArrayExpress:P57737 Bgee:P57737
CleanEx:HS_CORO7 Genevestigator:P57737 GermOnline:ENSG00000103426
Uniprot:P57737
Length = 925
Score = 122 (48.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/140 (29%), Positives = 63/140 (45%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-------GHTNEVFVLESHPFD 504
VT +AWD D + + +I++W L +VL GHT ++ L HP
Sbjct: 547 VTDLAWDPFDPHRLAVAGEDARIRLWRVPAEGLEEVLTTPETVLTGHTEKICSLRFHPLA 606
Query: 505 SRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYG 564
+ VL S+ +D + IWD+ + R K ++G + +F WSPDG A G
Sbjct: 607 ANVLASSSYDLTVRIWDLQAGADR-LK-----LQGH-QDQIFSLAWSPDGQQLATVCKDG 659
Query: 565 HLLVYGLGGFKRPQNIPREL 584
+ VY RP++ P L
Sbjct: 660 RVRVY------RPRSGPEPL 673
Score = 91 (37.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/180 (22%), Positives = 76/180 (42%)
Query: 232 RARDGKLLATLRGCSGE-ISDIAIDN-RNILLAAGTVDKTIRIWNLQTLAPISVLVGHQG 289
+ D + +A L GC + ++D+ + LLA G+ D+T+++W L P L G
Sbjct: 63 QGEDKRRVAHL-GCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLP--GPGQALPSAPG 119
Query: 290 IITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI 349
++ G P+EV F+ ++DG + + + +P+ E G+ +
Sbjct: 120 VVLGPEDLPVEVLQFH----PTSDGIL-VSAAGTTVKVWDAAKQQPL--TELAAHGDL-V 171
Query: 350 LCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDS-IQWSHSHLRFVS 408
+ +S G + T D +R++ D P + H + DS + W + VS
Sbjct: 172 QSAVWSRDGALVGTACKDKQLRIF--DPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVS 229
Score = 71 (30.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/108 (25%), Positives = 51/108 (47%)
Query: 195 RQHYVNLG-HLSAVFCVLFDKLGE-VIVTGADDLLIKLWRARD-GKLLATLRGCSGEISD 251
++ +LG H V + F + ++ TG+ D +KLWR G+ L + G D
Sbjct: 67 KRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAPGVVLGPED 126
Query: 252 IAID-------NRNILL-AAGTVDKTIRIWNLQTLAPISVLVGHQGII 291
+ ++ + IL+ AAGT T+++W+ P++ L H ++
Sbjct: 127 LPVEVLQFHPTSDGILVSAAGT---TVKVWDAAKQQPLTELAAHGDLV 171
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 156 (60.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/197 (23%), Positives = 96/197 (48%)
Query: 180 LSRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 238
LS++ ++SH + H ++ G L+ C +++ GAD ++ ++ + ++
Sbjct: 204 LSKYRQVASH----VGLHSASIPGILALDLCP--SDTNKILTGGADKNVVVFDKSSE-QI 256
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
LATL+G + +++ + L+ + + D TIRIW++ + + V+ H+ +TG++
Sbjct: 257 LATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLS--- 313
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 358
L G +YL S+S D +W + DI + V+ + C+ F P G
Sbjct: 314 LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLTKVTDETSGCSLTCAQFHPDG 362
Query: 359 LFLATGSGDHHVRVYKM 375
L TG+ D ++++ +
Sbjct: 363 LIFGTGTMDSQIKIWDL 379
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNRN 258
H SAV + G+ +++ +DD + G++L + GCS + D
Sbjct: 305 HESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG-- 362
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
++ GT+D I+IW+L+ ++ GH G IT + F NG+ YLA+ + D +
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE---NGY-YLATAADDSSVKL 418
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W D+ K + + + N + F G +LA G D + + K
Sbjct: 419 W------DLRKLKNFKTLQLDN-----NFEVKSLIFDQSGTYLALGGTDVQIYICK 463
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 156 (60.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/197 (23%), Positives = 96/197 (48%)
Query: 180 LSRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 238
LS++ ++SH + H ++ G L+ C +++ GAD ++ ++ + ++
Sbjct: 204 LSKYRQVASH----VGLHSASIPGILALDLCP--SDTNKILTGGADKNVVVFDKSSE-QI 256
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
LATL+G + +++ + L+ + + D TIRIW++ + + V+ H+ +TG++
Sbjct: 257 LATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLS--- 313
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 358
L G +YL S+S D +W + DI + V+ + C+ F P G
Sbjct: 314 LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLTKVTDETSGCSLTCAQFHPDG 362
Query: 359 LFLATGSGDHHVRVYKM 375
L TG+ D ++++ +
Sbjct: 363 LIFGTGTMDSQIKIWDL 379
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNRN 258
H SAV + G+ +++ +DD + G++L + GCS + D
Sbjct: 305 HESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG-- 362
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
++ GT+D I+IW+L+ ++ GH G IT + F NG+ YLA+ + D +
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE---NGY-YLATAADDSSVKL 418
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W D+ K + + + N + F G +LA G D + + K
Sbjct: 419 W------DLRKLKNFKTLQLDN-----NFEVKSLIFDQSGTYLALGGTDVQIYICK 463
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 156 (60.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/197 (23%), Positives = 96/197 (48%)
Query: 180 LSRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 238
LS++ ++SH + H ++ G L+ C +++ GAD ++ ++ + ++
Sbjct: 204 LSKYRQVASH----VGLHSASIPGILALDLCP--SDTNKILTGGADKNVVVFDKSSE-QI 256
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
LATL+G + +++ + L+ + + D TIRIW++ + + V+ H+ +TG++
Sbjct: 257 LATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLS--- 313
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 358
L G +YL S+S D +W + DI + V+ + C+ F P G
Sbjct: 314 LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLTKVTDETSGCSLTCAQFHPDG 362
Query: 359 LFLATGSGDHHVRVYKM 375
L TG+ D ++++ +
Sbjct: 363 LIFGTGTMDSQIKIWDL 379
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNRN 258
H SAV + G+ +++ +DD + G++L + GCS + D
Sbjct: 305 HESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG-- 362
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
++ GT+D I+IW+L+ ++ GH G IT + F NG+ YLA+ + D +
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE---NGY-YLATAADDSSVKL 418
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W D+ K + + + N + F G +LA G D + + K
Sbjct: 419 W------DLRKLKNFKTLQLDN-----NFEVKSLIFDQSGTYLALGGTDVQIYICK 463
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 156 (60.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/197 (23%), Positives = 96/197 (48%)
Query: 180 LSRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 238
LS++ ++SH + H ++ G L+ C +++ GAD ++ ++ + ++
Sbjct: 204 LSKYRQVASH----VGLHSASIPGILALDLCP--SDTNKILTGGADKNVVVFDKSTE-QI 256
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
LATL+G + +++ + L+ + + D TIRIW++ + + V+ H+ +TG++
Sbjct: 257 LATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLS--- 313
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 358
L G +YL S+S D +W + DI + V+ + C+ F P G
Sbjct: 314 LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLTKVTDETSGCSLTCAQFHPDG 362
Query: 359 LFLATGSGDHHVRVYKM 375
L TG+ D ++++ +
Sbjct: 363 LIFGTGTMDSQIKIWDL 379
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNRN 258
H SAV + G+ +++ +DD + G++L + GCS + D
Sbjct: 305 HESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG-- 362
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
++ GT+D I+IW+L+ ++ GH G IT + F NG+ YLA+ + D +
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE---NGY-YLATAADDSSVKL 418
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W D+ K + + + N + F G +LA G D + + K
Sbjct: 419 W------DLRKLKNFKTLQLDN-----NFEVKSLIFDQSGTYLALGGTDVQIYICK 463
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 156 (60.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/197 (23%), Positives = 96/197 (48%)
Query: 180 LSRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 238
LS++ ++SH + H ++ G L+ C +++ GAD ++ ++ + ++
Sbjct: 204 LSKYRQVASH----VGLHSASIPGILALDLCP--SDTNKILTGGADKNVVVFDKSTE-QI 256
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
LATL+G + +++ + L+ + + D TIRIW++ + + V+ H+ +TG++
Sbjct: 257 LATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLS--- 313
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 358
L G +YL S+S D +W + DI + V+ + C+ F P G
Sbjct: 314 LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLTKVTDETSGCSLTCAQFHPDG 362
Query: 359 LFLATGSGDHHVRVYKM 375
L TG+ D ++++ +
Sbjct: 363 LIFGTGTMDSQIKIWDL 379
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNRN 258
H SAV + G+ +++ +DD + G++L + GCS + D
Sbjct: 305 HESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG-- 362
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
++ GT+D I+IW+L+ ++ GH G IT + F NG+ YLA+ + D +
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE---NGY-YLATAADDSSVKL 418
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W D+ K + + + N + F G +LA G D + + K
Sbjct: 419 W------DLRKLKNFKTLQLDN-----NFEVKSLIFDQSGTYLALGGTDVQIYICK 463
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 156 (60.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/197 (23%), Positives = 96/197 (48%)
Query: 180 LSRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 238
LS++ ++SH + H ++ G L+ C +++ GAD ++ ++ + ++
Sbjct: 204 LSKYRQVASH----VGLHSASIPGILALDLCP--SDTNKILTGGADKNVVVFDKSTE-QI 256
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
LATL+G + +++ + L+ + + D TIRIW++ + + V+ H+ +TG++
Sbjct: 257 LATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLS--- 313
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 358
L G +YL S+S D +W + DI + V+ + C+ F P G
Sbjct: 314 LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLTKVTDETSGCSLTCAQFHPDG 362
Query: 359 LFLATGSGDHHVRVYKM 375
L TG+ D ++++ +
Sbjct: 363 LIFGTGTMDSQIKIWDL 379
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNRN 258
H SAV + G+ +++ +DD + G++L + GCS + D
Sbjct: 305 HESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG-- 362
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
++ GT+D I+IW+L+ ++ GH G IT + F NG+ YLA+ + D +
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE---NGY-YLATAADDSSVKL 418
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W D+ K + + + N + F G +LA G D + + K
Sbjct: 419 W------DLRKLKNFKTLQLDN-----NFEVKSLIFDQSGTYLALGGTDVQIYICK 463
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 156 (60.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 88/375 (23%), Positives = 143/375 (38%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNK 226
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G N+
Sbjct: 227 DVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA--STLGQHKGPIFALKW---NKKG-NF 280
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH + + N CS+
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCST------------- 327
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V K+ G D P I + H+++V++I+W + S S D T IW K Q
Sbjct: 328 DMCIHVCKL-GQDRP--IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMK--QDN 382
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H KE T K + + ++ + +F+ +++WD G +
Sbjct: 383 CVH-DLQA---HNKEIY--TIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIH 436
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVEGQGEGAL 545
L H V+ + P D R L S D + IW+ + Y+ I E A
Sbjct: 437 TLTKHQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAG 495
Query: 546 FD-GKWSPDGTTCAL 559
G + DG+ C L
Sbjct: 496 DKVGASASDGSVCVL 510
Score = 92 (37.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 35/139 (25%), Positives = 57/139 (41%)
Query: 283 VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFNE 340
VL GH+ + + P+ + LAS S D W + T V +
Sbjct: 164 VLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGG 219
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQW 399
+ P N + ++ G LATGS D R++ DG + S LG +H + +++W
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLG-----QHKGPIFALKW 274
Query: 400 SHSHLRFVSGSRDGTALIW 418
+ +S D T +IW
Sbjct: 275 NKKGNFILSAGVDKTTIIW 293
Score = 90 (36.7 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 27/108 (25%), Positives = 47/108 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + +F+ +++WD G + L H V+ + P D R L S D + IW+
Sbjct: 414 MLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSFDKCVHIWNT- 471
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 571
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 472 ---QTG-ALVHSY---RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 156 (60.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 88/375 (23%), Positives = 143/375 (38%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNK 226
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G N+
Sbjct: 227 DVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA--STLGQHKGPIFALKW---NKKG-NF 280
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W + FH + + N CS+
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCST------------- 327
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V K+ G D P I + H+++V++I+W + S S D T IW K Q
Sbjct: 328 DMCIHVCKL-GQDRP--IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMK--QDN 382
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H KE T K + + ++ + +F+ +++WD G +
Sbjct: 383 CVH-DLQA---HNKEIY--TIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIH 436
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVEGQGEGAL 545
L H V+ + P D R L S D + IW+ + Y+ I E A
Sbjct: 437 TLTKHQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAG 495
Query: 546 FD-GKWSPDGTTCAL 559
G + DG+ C L
Sbjct: 496 DKVGASASDGSVCVL 510
Score = 92 (37.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 35/139 (25%), Positives = 57/139 (41%)
Query: 283 VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFNE 340
VL GH+ + + P+ + LAS S D W + T V +
Sbjct: 164 VLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGG 219
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQW 399
+ P N + ++ G LATGS D R++ DG + S LG +H + +++W
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLG-----QHKGPIFALKW 274
Query: 400 SHSHLRFVSGSRDGTALIW 418
+ +S D T +IW
Sbjct: 275 NKKGNFILSAGVDKTTIIW 293
Score = 90 (36.7 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 27/108 (25%), Positives = 47/108 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + +F+ +++WD G + L H V+ + P D R L S D + IW+
Sbjct: 414 MLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSFDKCVHIWNT- 471
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 571
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 472 ---QTG-ALVHSY---RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 159 (61.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 68/258 (26%), Positives = 115/258 (44%)
Query: 124 SVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPN----SVKVHNTVNVLRSREYSGP 179
SV +H T + + Y+G S+ + +H+T LV + V V R + +
Sbjct: 20 SVDLHPTEPWMLASLYNG----SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR-KNWVVT 74
Query: 180 LSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR-ARDGKL 238
+ + I Y+ L + ++ H + C+ I+T +DD+LIKLW +
Sbjct: 75 GADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSC 134
Query: 239 LATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFC 297
G + + I I+ + N A+ ++D+TI++W L + +P L GH+ GVN
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE---KGVNCI 191
Query: 298 PLEVNGFN-YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA-HILCSSFS 355
G YL S + D + W Y+ +KT V E G+A ++ C+SF
Sbjct: 192 DYYSGGDKPYLISGADDRLVKIWDYQ-----NKTC----VQTLE----GHAQNVSCASFH 238
Query: 356 PGGLFLATGSGDHHVRVY 373
P + TGS D VR++
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 159 (61.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 68/258 (26%), Positives = 115/258 (44%)
Query: 124 SVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPN----SVKVHNTVNVLRSREYSGP 179
SV +H T + + Y+G S+ + +H+T LV + V V R + +
Sbjct: 20 SVDLHPTEPWMLASLYNG----SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR-KNWVVT 74
Query: 180 LSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR-ARDGKL 238
+ + I Y+ L + ++ H + C+ I+T +DD+LIKLW +
Sbjct: 75 GADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSC 134
Query: 239 LATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFC 297
G + + I I+ + N A+ ++D+TI++W L + +P L GH+ GVN
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE---KGVNCI 191
Query: 298 PLEVNGFN-YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA-HILCSSFS 355
G YL S + D + W Y+ +KT V E G+A ++ C+SF
Sbjct: 192 DYYSGGDKPYLISGADDRLVKIWDYQ-----NKTC----VQTLE----GHAQNVSCASFH 238
Query: 356 PGGLFLATGSGDHHVRVY 373
P + TGS D VR++
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 159 (61.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 68/258 (26%), Positives = 115/258 (44%)
Query: 124 SVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPN----SVKVHNTVNVLRSREYSGP 179
SV +H T + + Y+G S+ + +H+T LV + V V R + +
Sbjct: 20 SVDLHPTEPWMLASLYNG----SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR-KNWVVT 74
Query: 180 LSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR-ARDGKL 238
+ + I Y+ L + ++ H + C+ I+T +DD+LIKLW +
Sbjct: 75 GADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSC 134
Query: 239 LATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFC 297
G + + I I+ + N A+ ++D+TI++W L + +P L GH+ GVN
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE---KGVNCI 191
Query: 298 PLEVNGFN-YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA-HILCSSFS 355
G YL S + D + W Y+ +KT V E G+A ++ C+SF
Sbjct: 192 DYYSGGDKPYLISGADDRLVKIWDYQ-----NKTC----VQTLE----GHAQNVSCASFH 238
Query: 356 PGGLFLATGSGDHHVRVY 373
P + TGS D VR++
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 159 (61.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 68/258 (26%), Positives = 115/258 (44%)
Query: 124 SVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPN----SVKVHNTVNVLRSREYSGP 179
SV +H T + + Y+G S+ + +H+T LV + V V R + +
Sbjct: 20 SVDLHPTEPWMLASLYNG----SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR-KNWVVT 74
Query: 180 LSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR-ARDGKL 238
+ + I Y+ L + ++ H + C+ I+T +DD+LIKLW +
Sbjct: 75 GADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSC 134
Query: 239 LATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFC 297
G + + I I+ + N A+ ++D+TI++W L + +P L GH+ GVN
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE---KGVNCI 191
Query: 298 PLEVNGFN-YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA-HILCSSFS 355
G YL S + D + W Y+ +KT V E G+A ++ C+SF
Sbjct: 192 DYYSGGDKPYLISGADDRLVKIWDYQ-----NKTC----VQTLE----GHAQNVSCASFH 238
Query: 356 PGGLFLATGSGDHHVRVY 373
P + TGS D VR++
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 159 (61.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 68/258 (26%), Positives = 115/258 (44%)
Query: 124 SVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPN----SVKVHNTVNVLRSREYSGP 179
SV +H T + + Y+G S+ + +H+T LV + V V R + +
Sbjct: 20 SVDLHPTEPWMLASLYNG----SVCVWNHETQTLVKTFEVCDLPVRAAKFVAR-KNWVVT 74
Query: 180 LSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR-ARDGKL 238
+ + I Y+ L + ++ H + C+ I+T +DD+LIKLW +
Sbjct: 75 GADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSC 134
Query: 239 LATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFC 297
G + + I I+ + N A+ ++D+TI++W L + +P L GH+ GVN
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE---KGVNCI 191
Query: 298 PLEVNGFN-YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA-HILCSSFS 355
G YL S + D + W Y+ +KT V E G+A ++ C+SF
Sbjct: 192 DYYSGGDKPYLISGADDRLVKIWDYQ-----NKTC----VQTLE----GHAQNVSCASFH 238
Query: 356 PGGLFLATGSGDHHVRVY 373
P + TGS D VR++
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 127 (49.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 34/151 (22%), Positives = 63/151 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + F G+ + T + D +KLW G + T G S + + +
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFV 451
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+ ++DKT +IW++ + L GH + + F P N L ++S D + W
Sbjct: 452 ASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFS----NTLLTSSADKTLSIWDA 507
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCS 352
+ I ++++ N+ I H++ S
Sbjct: 508 RTGI-CEQSLYGHMHSINDAIFDPRGHMIAS 537
Score = 81 (33.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 455 VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVF-VLESHPFDSRVLLSAGH 513
V +D+S R V+ + N I + D +G+ + L GH NE V+ SH D +L S G
Sbjct: 568 VNFDSSGR-VLAQASGNGVIHLLDLKSGE-IHKLMGHENEAHTVVFSH--DGEILFSGGS 623
Query: 514 DGLIIIW 520
DG + W
Sbjct: 624 DGTVRTW 630
Score = 58 (25.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 344 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 403
PGN +F G LA SG+ + + + + I ++ H ++ ++ +SH
Sbjct: 564 PGNE----VNFDSSGRVLAQASGNGVIHLLDLKSGE----IHKLMGHENEAHTVVFSHDG 615
Query: 404 LRFVSGSRDGTALIW 418
SG DGT W
Sbjct: 616 EILFSGGSDGTVRTW 630
Score = 49 (22.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 21/59 (35%), Positives = 28/59 (47%)
Query: 503 FDS--RVLLSAGHDGLIIIWDILSS---KQRGYK-WFHNIVEGQGEGALFDGKWSPDGT 555
FDS RVL A +G+I + D+ S K G++ H +V LF G DGT
Sbjct: 570 FDSSGRVLAQASGNGVIHLLDLKSGEIHKLMGHENEAHTVVFSHDGEILFSG--GSDGT 626
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 167 (63.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 48/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + +W + +L G + I + I +
Sbjct: 17 VAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G +++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPY---G-SFVASGSLDTDIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
+ I K H + +R C FSP G +LA+ + DH V+++ +
Sbjct: 133 DVRRKGCIFKYKSH-----TQAVR-------CLRFSPDGKWLASAADDHTVKLWDL 176
Score = 138 (53.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 262
H AV C+ F G+ + + ADD +KLW GK++ G SG ++ + LLA
Sbjct: 146 HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLA 205
Query: 263 AGTVDKTIRIWNLQTLAPISVL 284
+G+ D+TIR W+L+ +S +
Sbjct: 206 SGSSDRTIRFWDLEKFHVVSCI 227
Score = 136 (52.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 43/175 (24%), Positives = 74/175 (42%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + + + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV 120
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+G++D I++W+++ I H + + F P +G +LAS + D + W
Sbjct: 121 ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
D+ K +F F P N F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKVMFE----FTGHSGPVNV----VEFHPSEYLLASGSSDRTIRFWDLE 219
Score = 40 (19.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 866 IQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAP-YYPQMGDEVMFFKQGYQKYVDAVRSK 924
+Q LPKQ +PE +P + +P+ P P +E + K ++ A++++
Sbjct: 425 VQTPLPKQELPET---FQRPPIASSTPMPRAEPSVIPAARNEPIGLKAS--DFLPALKNQ 479
Query: 925 GIYELS 930
EL+
Sbjct: 480 SQAELT 485
Score = 37 (18.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 876 PEEVPDIYKPSDWLAEVVPK-KAPYYPQMGDEVMFFKQ 912
PE+ +I++P + ++ P P+ DE + K+
Sbjct: 378 PEDYKEIFQPRNAISRTPPHINEPFPAPPEDEPITAKE 415
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 153 (58.9 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 56/183 (30%), Positives = 87/183 (47%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID----NR 257
GH V+ F G V+G D + +LW A D LR +G ++D+ N
Sbjct: 539 GHNYPVWDTQFSPFGYYFVSGGHDRVARLW-ATDH--YQPLRIFAGHLADVTCTRFHPNS 595
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
N + A G+ D+T+R+W++ + + GH+G I + F P NG +LAS STDG +
Sbjct: 596 NYV-ATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP---NG-KFLASGSTDGRVL 650
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK-MD 376
W DI H ++ + G + L FS G +A+GS D+ VR++ M
Sbjct: 651 LW------DIG----HGLMIAELKGHTGTIYAL--KFSRDGEIIASGSIDNTVRLWDVMR 698
Query: 377 GVD 379
+D
Sbjct: 699 AID 701
Score = 148 (57.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 184 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR 243
L + H Y LR + GHL+ V C F + TG+ D ++LW +G +
Sbjct: 567 LWATDH-YQPLR---IFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFT 622
Query: 244 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 303
G G I +A LA+G+ D + +W++ I+ L GH G I + F +G
Sbjct: 623 GHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSR---DG 679
Query: 304 FNYLASTSTDGCIGFWKYKLDIDISKT 330
+AS S D + W ID +T
Sbjct: 680 -EIIASGSIDNTVRLWDVMRAIDDVET 705
Score = 134 (52.2 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 46/172 (26%), Positives = 73/172 (42%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V+ V F +++ ++D I+LW + L +G + + D
Sbjct: 497 GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYF 556
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G D+ R+W P+ + GH +T F P N NY+A+ S+D + W
Sbjct: 557 VSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP---NS-NYVATGSSDRTVRLW-- 610
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
D+ V +F G H L +FSP G FLA+GS D V ++
Sbjct: 611 --DVLNGNCVR----IFTGH--KGPIHSL--AFSPNGKFLASGSTDGRVLLW 652
Score = 123 (48.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 223 ADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQTLAPI 281
+DD+L ++ + L G SG + ++ +RN LL++ D TIR+W+LQT +
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSE-DGTIRLWSLQTFTCL 534
Query: 282 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV-MFNE 340
GH + F P G+ Y S D W T ++P+ +F
Sbjct: 535 VGYKGHNYPVWDTQFSPF---GY-YFVSGGHDRVARLWA---------TDHYQPLRIFAG 581
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
+ A + C+ F P ++ATGS D VR++
Sbjct: 582 HL----ADVTCTRFHPNSNYVATGSSDRTVRLW 610
Score = 87 (35.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 17/78 (21%), Positives = 42/78 (53%)
Query: 446 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
T K + +A+ + +++ + + + ++ +WD +G ++ LKGHT ++ L+ D
Sbjct: 622 TGHKGPIHSLAFSPNGKFLASG-STDGRVLLWDIGHGLMIAELKGHTGTIYALKFSR-DG 679
Query: 506 RVLLSAGHDGLIIIWDIL 523
++ S D + +WD++
Sbjct: 680 EIIASGSIDNTVRLWDVM 697
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 167 (63.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 48/176 (27%), Positives = 84/176 (47%)
Query: 201 LGHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 259
+ H S V ++ K G ++ TG DD + +W + +L G + I + I +
Sbjct: 17 VAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEE 76
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G +++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPY---G-SFVASGSLDTDIKLW 132
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 375
+ I K H + +R C FSP G +LA+ + DH V+++ +
Sbjct: 133 DVRRKGCIFKYKSH-----TQAVR-------CLRFSPDGKWLASAADDHTVKLWDL 176
Score = 40 (19.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 866 IQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAP-YYPQMGDEVMFFKQGYQKYVDAVRSK 924
+Q LPKQ +PE +P + +P+ P P +E + K ++ A++++
Sbjct: 426 VQTPLPKQELPET---FQRPPIASSTPMPRAEPSVIPAARNEPIGLKAS--DFLPALKNQ 480
Query: 925 GIYELS 930
EL+
Sbjct: 481 SQAELT 486
Score = 37 (18.1 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 876 PEEVPDIYKPSDWLAEVVPK-KAPYYPQMGDEVMFFKQ 912
PE+ +I++P + ++ P P+ DE + K+
Sbjct: 379 PEDYKEIFQPRNAISRTPPHINEPFPAPPEDEPITAKE 416
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 155 (59.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 262
H ++V V F + G+ +VT +DD +K+W K L +L + + L+A
Sbjct: 101 HTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIA 160
Query: 263 AGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 322
+ D+T+R+W+ + I++ + G T V+F +G +AS+ D I W
Sbjct: 161 SCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDF---NSSG-TCIASSGADNTIKIW--- 213
Query: 323 LDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
DI +K + H V NA + C SF P G +L +GS D +++
Sbjct: 214 -DIRTNKLIQHYKVH--------NAGVNCFSFHPSGNYLISGSSDSTIKI 254
Score = 127 (49.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 45/142 (31%), Positives = 64/142 (45%)
Query: 235 DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 294
D L +G IS + N LA G+ DK++ IWNL A VGH +ITGV
Sbjct: 7 DPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGV 66
Query: 295 NFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 354
NF P +G + +AS+S D + W + + TVF + A + F
Sbjct: 67 NFAP---SG-SLVASSSRDQTVRLWTPSIKGE--STVF----------KAHTASVRSVHF 110
Query: 355 SPGGLFLATGSGDHHVRVYKMD 376
S G L T S D V+V+ ++
Sbjct: 111 SRDGQRLVTASDDKSVKVWGVE 132
Score = 105 (42.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 42/189 (22%), Positives = 77/189 (40%)
Query: 185 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG 244
M S + L +H+ GH + C F+ + + TG+ D + +W G
Sbjct: 1 MASVMEDPTLERHFK--GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVG 58
Query: 245 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGF 304
+ I+ + L+A+ + D+T+R+W +V H + V+F +G
Sbjct: 59 HTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSR---DG- 114
Query: 305 NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 364
L + S D + W ++ K ++ N R N + C+ FSP G +A+
Sbjct: 115 QRLVTASDDKSVKVW----GVERKKFLYS----LN---RHTN-WVRCARFSPDGRLIASC 162
Query: 365 SGDHHVRVY 373
D VR++
Sbjct: 163 GDDRTVRLW 171
Score = 74 (31.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 453 TMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG 512
T V +++S + ++ N IKIWD L+Q K H V HP L+S
Sbjct: 190 TFVDFNSSGTCIASSGADN-TIKIWDIRTNKLIQHYKVHNAGVNCFSFHP-SGNYLISGS 247
Query: 513 HDGLIIIWDILSSK 526
D I I D+L +
Sbjct: 248 SDSTIKILDLLEGR 261
Score = 66 (28.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 47/203 (23%), Positives = 78/203 (38%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-RGYKW 532
+++WD + + + + ++ + + S+G D I IWDI ++K + YK
Sbjct: 168 VRLWDTSSHQCINIFTDYGGSATFVDFNS-SGTCIASSGADNTIKIWDIRTNKLIQHYKV 226
Query: 533 FH---NIVEGQGEGA-LFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQ---NIPRE-- 583
+ N G L G S D +T + D L+Y L G K P R+
Sbjct: 227 HNAGVNCFSFHPSGNYLISG--SSD-STIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGD 283
Query: 584 LFFH--TDYRTLNRPNGLFEPTYDEVTNLPPHLM---PPPFLVDLNGTPYPPEVQRLVPG 638
LF D + L Y E+ + + PPP L+D+ YP R P
Sbjct: 284 LFASGGADSQVLMWKTNFDSLNYRELLSKHSKRVTPDPPPHLMDI----YPRSHHRHHP- 338
Query: 639 RENADDTELLPDITTNDDGHVEI 661
+ + + D + D VE+
Sbjct: 339 QNGTVEINPVADTQSTDPQVVEV 361
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 61/211 (28%), Positives = 98/211 (46%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS--DIAIDNRNIL 260
H AV CV F + + +G++D IK+W G++ TL+G +S D N L
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 261 LAAGTVDKTIRIWN-LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+ + D TI++W+ + A I L GH ++ V F L N N+L S S DG + W
Sbjct: 173 LASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRF--LTSND-NHLISASRDGTLRIW 229
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
D+S T F V+ + + I S S G +L +G D + V+++ +
Sbjct: 230 ------DVS-TGFCVKVIKSAT----ESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAE 278
Query: 380 SPLGILEVEEHSDK-VDSIQWSHSHLRFVSG 409
+L E + V + S+ HL ++G
Sbjct: 279 PKAALLGHENFIECCVFAPPASYEHLATLAG 309
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 86/304 (28%), Positives = 128/304 (42%)
Query: 261 LAAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+G+ D TI+IW+ + L I L GH ++G+++ + N LAS S+D I W
Sbjct: 129 LASGSEDCTIKIWDWE-LGEIERTLKGHIRGVSGLDYGGQKGN--TLLASCSSDLTIKLW 185
Query: 320 KYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGV 378
D +T+ H+ + + R N + L S+ G L + S V+V K
Sbjct: 186 DPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIK-SAT 244
Query: 379 DSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNT---C 435
+S I +V S D +W VSG RD +W ++ + L C
Sbjct: 245 ES--WIRDV---SPSFDG-KW------LVSGGRDQAITVWEVSSAEPKAALLGHENFIEC 292
Query: 436 LPHTKETSDE---TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 492
S E T +K A +S +V T + IK+W+A G L++ L GH
Sbjct: 293 CVFAPPASYEHLATLAGLKKPPPA-TSSCEFVATGAR-DKTIKLWEA-RGRLIKTLHGHD 349
Query: 493 NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 552
N V L HP + L S D I WD LS + R K + G E + +W+P
Sbjct: 350 NWVRGLVFHP-GGKYLFSVSDDKTIRCWD-LSQEGRLVK----TISGAHEHFVSCIRWAP 403
Query: 553 DGTT 556
T
Sbjct: 404 SPNT 407
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 61/211 (28%), Positives = 98/211 (46%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS--DIAIDNRNIL 260
H AV CV F + + +G++D IK+W G++ TL+G +S D N L
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 261 LAAGTVDKTIRIWN-LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+ + D TI++W+ + A I L GH ++ V F L N N+L S S DG + W
Sbjct: 173 LASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRF--LTSND-NHLISASRDGTLRIW 229
Query: 320 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 379
D+S T F V+ + + I S S G +L +G D + V+++ +
Sbjct: 230 ------DVS-TGFCVKVIKSAT----ESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAE 278
Query: 380 SPLGILEVEEHSDK-VDSIQWSHSHLRFVSG 409
+L E + V + S+ HL ++G
Sbjct: 279 PKAALLGHENFIECCVFAPPASYEHLATLAG 309
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 86/304 (28%), Positives = 128/304 (42%)
Query: 261 LAAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 319
LA+G+ D TI+IW+ + L I L GH ++G+++ + N LAS S+D I W
Sbjct: 129 LASGSEDCTIKIWDWE-LGEIERTLKGHIRGVSGLDYGGQKGN--TLLASCSSDLTIKLW 185
Query: 320 KYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGV 378
D +T+ H+ + + R N + L S+ G L + S V+V K
Sbjct: 186 DPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIK-SAT 244
Query: 379 DSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNT---C 435
+S I +V S D +W VSG RD +W ++ + L C
Sbjct: 245 ES--WIRDV---SPSFDG-KW------LVSGGRDQAITVWEVSSAEPKAALLGHENFIEC 292
Query: 436 LPHTKETSDE---TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 492
S E T +K A +S +V T + IK+W+A G L++ L GH
Sbjct: 293 CVFAPPASYEHLATLAGLKKPPPA-TSSCEFVATGAR-DKTIKLWEA-RGRLIKTLHGHD 349
Query: 493 NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 552
N V L HP + L S D I WD LS + R K + G E + +W+P
Sbjct: 350 NWVRGLVFHP-GGKYLFSVSDDKTIRCWD-LSQEGRLVK----TISGAHEHFVSCIRWAP 403
Query: 553 DGTT 556
T
Sbjct: 404 SPNT 407
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 155 (59.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 46/197 (23%), Positives = 96/197 (48%)
Query: 180 LSRFLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 238
LS++ ++SH + H ++ G L+ C +++ GAD ++ ++ + ++
Sbjct: 213 LSKYRQVASH----VGLHSASIPGILALDLCPA--DTNKILTGGADKNVVVFDKSSE-QI 265
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
LATL+G + +++ + L+ + + D TIRIW++ + + V+ H+ +TG++
Sbjct: 266 LATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLS--- 322
Query: 299 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 358
L G +YL S+S D +W + DI + V+ + C+ F P G
Sbjct: 323 LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLTKVTDETSGCSLTCAQFHPDG 371
Query: 359 LFLATGSGDHHVRVYKM 375
L TG+ D ++++ +
Sbjct: 372 LIFGTGTMDSQIKIWDL 388
Score = 124 (48.7 bits), Expect = 0.00058, P = 0.00057
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNRN 258
H SAV + G+ +++ +DD + G++L + GCS + D
Sbjct: 314 HESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG-- 371
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
++ GT+D I+IW+L+ ++ GH G IT + F NG+ YLA+ + D +
Sbjct: 372 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE---NGY-YLATAADDSSVKL 427
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
W D+ K + + + N + F G +LA G D + + K
Sbjct: 428 W------DLRKLKNFKTLQLDN-----NFEVKSLIFDQSGTYLALGGTDVQIYICK 472
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 155 (59.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 88/375 (23%), Positives = 142/375 (37%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 257
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 258 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 306
++ LLA G+ D RIW LA S L H+G I + + G N+
Sbjct: 227 DVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA--STLGQHKGPIFALKW---NKKG-NF 280
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ S D W FH + + N CS+
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCST------------- 327
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 426
D + V K+ G D P I + H+++V++I+W + S S D T IW K Q
Sbjct: 328 DMCIHVCKL-GQDRP--IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMK--QDN 382
Query: 427 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 486
+ D+ H KE T K + + ++ + +F+ +++WD G +
Sbjct: 383 CVH-DLQA---HNKEIY--TIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIH 436
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVEGQGEGAL 545
L H V+ + P D R L S D + IW+ + Y+ I E A
Sbjct: 437 TLTKHQEPVYSVAFSP-DGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAG 495
Query: 546 FD-GKWSPDGTTCAL 559
G + DG+ C L
Sbjct: 496 DKVGASASDGSVCVL 510
Score = 93 (37.8 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 35/139 (25%), Positives = 57/139 (41%)
Query: 283 VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFNE 340
VL GH+ + + P+ + LAS S D W + T V +
Sbjct: 164 VLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 341 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQW 399
+ P N + ++ G LATGS D R++ DG + S LG +H + +++W
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLG-----QHKGPIFALKW 274
Query: 400 SHSHLRFVSGSRDGTALIW 418
+ +S D T +IW
Sbjct: 275 NKKGNFILSAGVDKTTIIW 293
Score = 90 (36.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 27/108 (25%), Positives = 47/108 (43%)
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
++ + +F+ +++WD G + L H V+ + P D R L S D + IW+
Sbjct: 414 MLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSFDKCVHIWNT- 471
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 571
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 472 ---QTG-ALVHSY---RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 154 (59.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 58/224 (25%), Positives = 98/224 (43%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+HY GHLS V+ + +++VTG D + ++W R + L G +G ++D+
Sbjct: 221 RHYH--GHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQ 278
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ + G++D T+R+W+L + VL H+ I + P E F + AS ST G
Sbjct: 279 EADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPRE---FTF-ASAST-GS 333
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL-FLATGSGDHHVRVYK 374
I WK + H ++ + N +L S G + F +G R
Sbjct: 334 IKQWKCPGGEFMQNFEGHNAIINTLSVNEDN--VLFSGGDNGSMSFWDWKTG---YRYQT 388
Query: 375 MDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
+D P G LE E + + + + LR ++G D T +W
Sbjct: 389 IDTTAQP-GSLEAEAG---IMTSTFDRTGLRLITGEADKTIKVW 428
Score = 135 (52.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 50/188 (26%), Positives = 78/188 (41%)
Query: 198 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+V GH V V + ++TG+ D ++LW GK + L I +A R
Sbjct: 263 HVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPR 322
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
A+ + +I+ W + GH II L VN N L S +G +
Sbjct: 323 EFTFASASTG-SIKQWKCPGGEFMQNFEGHNAIIN-----TLSVNEDNVLFSGGDNGSMS 376
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGN----AHILCSSFSPGGLFLATGSGDHHVRVY 373
FW +K +T+ + +PG+ A I+ S+F GL L TG D ++V+
Sbjct: 377 FWDWKTGYRY-QTI-------DTTAQPGSLEAEAGIMTSTFDRTGLRLITGEADKTIKVW 428
Query: 374 KMDGVDSP 381
K D +P
Sbjct: 429 KQDDQATP 436
Score = 117 (46.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 231 WRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGI 290
W A KL+ + G G + +A++ N A+G D+TI+IWNL T A L GH
Sbjct: 129 WHA-PWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHIST 187
Query: 291 ITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH 333
+ G+ P YL S D + W D++ +K + H
Sbjct: 188 VRGLAVSPRHP----YLFSCGEDKMVKCW----DLETNKVIRH 222
Score = 116 (45.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 37/152 (24%), Positives = 63/152 (41%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GHL V + + E +GA D IK+W G L TL G + +A+ R+ L
Sbjct: 141 GHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYL 200
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ DK ++ W+L+T I GH ++GV L + L + DG W
Sbjct: 201 FSCGEDKMVKCWDLETNKVIRHYHGH---LSGVYTLALHPR-LDLLVTGGRDGVARVWDM 256
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSS 353
+ +I H + + + + + ++ S
Sbjct: 257 RTRSNIHVLSGHTGTVADVQCQEADPQVITGS 288
Score = 110 (43.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH+S V + + + +D ++K W K++ G + +A+ R LL
Sbjct: 183 GHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLL 242
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
G D R+W+++T + I VL GH G + V C E + + + S D + W
Sbjct: 243 VTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQ-CQ-EADP--QVITGSLDATVRLW-- 296
Query: 322 KLDIDISKTV 331
D+ KT+
Sbjct: 297 --DLAAGKTM 304
Score = 78 (32.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 475 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFH 534
++WD + VL GHT V ++ D +V+ + D + +WD+ + K G H
Sbjct: 252 RVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVI-TGSLDATVRLWDLAAGKTMGVLTHH 310
Score = 65 (27.9 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
IK W G+ +Q +GH + L + + VL S G +G + WD
Sbjct: 334 IKQWKCPGGEFMQNFEGHNAIINTLSVN--EDNVLFSGGDNGSMSFWD 379
Score = 56 (24.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 502
V V +D VIT + + +++WD G + VL H + L +HP
Sbjct: 272 VADVQCQEADPQVITG-SLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHP 321
>DICTYBASE|DDB_G0276423 [details] [associations]
symbol:hira "histone cell cycle regulation defective
homolog A" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007110 InterPro:IPR011494 InterPro:IPR015943
InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569 Pfam:PF09453
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0276423 GO:GO:0005634 GO:GO:0003714
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:AAFI02000015 KO:K11293 RefSeq:XP_643117.1
ProteinModelPortal:Q86HX1 STRING:Q86HX1 EnsemblProtists:DDB0233325
GeneID:8620522 KEGG:ddi:DDB_G0276423 OMA:DIHPDES
ProtClustDB:CLSZ2497234 Uniprot:Q86HX1
Length = 1114
Score = 163 (62.4 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 53/175 (30%), Positives = 85/175 (48%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWR-ARDGKLL----------ATLRGCSGEISD 251
H +V V + K G+ + +G+DD L +W + + LL ATLRG + +IS+
Sbjct: 67 HFHSVNSVKWSKDGKYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHASDISE 126
Query: 252 IAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 311
++ N +A + DK+I IW +S L H+G + G+ + PL G YLAS S
Sbjct: 127 VSWSPDNKYIATCSFDKSIIIWETNKFQMVSKLEEHKGFVKGLTWDPL---G-RYLASQS 182
Query: 312 TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
D + W+ D + +T+ EP + GN+ L S++P G F+ G
Sbjct: 183 EDKSLIIWRTS-DW-VVETIVTEPFKHS-----GNSFFLRPSWTPDGQFIVATHG 230
Score = 136 (52.9 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 57/230 (24%), Positives = 89/230 (38%)
Query: 345 GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE--------------H 390
G I P G +ATG GD ++++ M +P+ +LE EE H
Sbjct: 12 GGLSIYSIDIHPDGTRVATGGGDAKIKIWSM----APISLLEAEEDAGIPKLLCSIENAH 67
Query: 391 SDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN-TCLPHTKETSDETNKK 449
V+S++WS SGS D +IW + N C+ + + +
Sbjct: 68 FHSVNSVKWSKDGKYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHASD---- 123
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 509
++ V+W ++++ T +F+ I IW+ +V L+ H V L P R L
Sbjct: 124 --ISEVSWSPDNKYIATC-SFDKSIIIWETNKFQMVSKLEEHKGFVKGLTWDPL-GRYLA 179
Query: 510 SAGHDGLIIIWDILSSKQRGYKWF-HNIV----EGQGEGALFDGKWSPDG 554
S D +IIW R W IV + G W+PDG
Sbjct: 180 SQSEDKSLIIW-------RTSDWVVETIVTEPFKHSGNSFFLRPSWTPDG 222
Score = 53 (23.7 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 17/76 (22%), Positives = 37/76 (48%)
Query: 451 KVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLS 510
++T++ + W A + + I++ NG ++ N++ LES+ + LL+
Sbjct: 778 RITLIT--GNKNWC-AATTLDSLLYIFNK-NGTIIMSNIVPRNQLSFLESNKTNH--LLA 831
Query: 511 AGHDGLIIIWDILSSK 526
DG + +W++L K
Sbjct: 832 ITCDGFVCVWNVLKKK 847
Score = 44 (20.5 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 380 SPLGILEVEEHSDK-VDSIQWSHSHLRFVSGSRDGT 414
SP ++ D+ + I W FV+ S DGT
Sbjct: 298 SPRSLMVTRSLFDQCIQDISWCSDGYSFVACSTDGT 333
>MGI|MGI:1926135 [details] [associations]
symbol:Coro7 "coronin 7" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1926135 GO:GO:0016021 GO:GO:0005829
GO:GO:0005794 GO:GO:0000139 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016023 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08954 CTD:79585
HOGENOM:HOG000006535 HOVERGEN:HBG051080 OrthoDB:EOG49S65R
OMA:EVEFARC EMBL:AK018739 EMBL:AK040408 EMBL:AK150051 EMBL:BC061006
IPI:IPI00135390 RefSeq:NP_084481.3 UniGene:Mm.325512
ProteinModelPortal:Q9D2V7 SMR:Q9D2V7 STRING:Q9D2V7
PhosphoSite:Q9D2V7 PaxDb:Q9D2V7 PRIDE:Q9D2V7
Ensembl:ENSMUST00000038552 GeneID:78885 KEGG:mmu:78885
UCSC:uc007xzy.1 InParanoid:Q9D2V7 ChiTaRS:CORO7 NextBio:349664
Bgee:Q9D2V7 CleanEx:MM_CORO7 Genevestigator:Q9D2V7
GermOnline:ENSMUSG00000039637 Uniprot:Q9D2V7
Length = 922
Score = 130 (50.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 455 VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-------GHTNEVFVLESHPFDSRV 507
+ WD D + + +I++W G L VL GHT +++ L HP + V
Sbjct: 547 LVWDPFDPHRLAVAGEDARIRLWRVPPGGLENVLTTPETVLTGHTEKIYSLRFHPLAADV 606
Query: 508 LLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLL 567
L S+ +D + IWD+ + +R K ++G + +F WSPDG A GH+
Sbjct: 607 LASSSYDLTVRIWDLQTGAER-LK-----LQGH-QDQIFSLAWSPDGKQLATVCKDGHVR 659
Query: 568 VY 569
VY
Sbjct: 660 VY 661
Score = 81 (33.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 227 LIKLWRARDGKLLATLRGCSGE-ISDIAIDN-RNILLAAGTVDKTIRIWNLQTLAPISVL 284
+I L + K T GC + ++D+ + LLA+G+ D+TI++W L L
Sbjct: 57 VISLEGHEENKRHVTYLGCHSDLVTDLDFSPFDDFLLASGSADRTIKLWRLSGTG--EAL 114
Query: 285 VGHQGIITGVNFCPLEVNGFN 305
G++ G P+EV F+
Sbjct: 115 PSVPGVVLGPEELPVEVLQFH 135
Score = 80 (33.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 25/115 (21%), Positives = 54/115 (46%)
Query: 185 MISSHKYSNLRQHYVNLG-HLSAVFCVLFDKLGE-VIVTGADDLLIKLWR-ARDGKLLAT 241
+IS + ++H LG H V + F + ++ +G+ D IKLWR + G+ L +
Sbjct: 57 VISLEGHEENKRHVTYLGCHSDLVTDLDFSPFDDFLLASGSADRTIKLWRLSGTGEALPS 116
Query: 242 LRGCSGEISDIAIDNRNIL-----LAAGTVDKTIRIWNLQTLAPISVLVGHQGII 291
+ G ++ ++ + T KT+++W++ P++ L H+ ++
Sbjct: 117 VPGVVLGPEELPVEVLQFHPTVDGVLVSTAGKTVKVWDVAKQQPLTELEAHKDLV 171
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 154 (59.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 60/216 (27%), Positives = 93/216 (43%)
Query: 195 RQH-YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIA 253
RQ+ +V GH S V + + +VTG+ D I+LW GK L TL + ++
Sbjct: 279 RQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALS 338
Query: 254 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 313
+ A+G+ D I+ W A + GH I+ L +N N + S + +
Sbjct: 339 LHPDEFTFASGSSDN-IKHWKFPEGAFMGNFEGHNAIVN-----TLSINSDNVMFSGADN 392
Query: 314 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN----AHILCSSFSPGGLFLATGSGDHH 369
G + FW +K H+ ++PG+ A I SSF GL L T D
Sbjct: 393 GSMCFWDWKSG--------HKYQELQSVVQPGSLDSEAGIFASSFDKTGLRLITCEADKS 444
Query: 370 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 405
V++YK VD+ E H + + W+ S+LR
Sbjct: 445 VKIYKQ--VDNATP----ETHPN----LPWTPSNLR 470
Score = 140 (54.3 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 48/193 (24%), Positives = 86/193 (44%)
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 255
+HY GHLS V+ + +V+VT D + ++W R + + L G ++ +A+
Sbjct: 241 RHYH--GHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQ 298
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
+ + G++D TIR+W+L ++ L H+ + ++ P E F + AS S+D
Sbjct: 299 EFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDE---FTF-ASGSSDN- 353
Query: 316 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL-FLATGSGDHHVR--- 371
I WK+ + H ++ I N ++ S G + F SG +
Sbjct: 354 IKHWKFPEGAFMGNFEGHNAIVNTLSINSDN--VMFSGADNGSMCFWDWKSGHKYQELQS 411
Query: 372 VYKMDGVDSPLGI 384
V + +DS GI
Sbjct: 412 VVQPGSLDSEAGI 424
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 164 (62.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 2 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 298
A+G+ D+TIR W+L+ +S + G G + V F P
Sbjct: 62 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 98
Score = 39 (18.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 6/32 (18%), Positives = 19/32 (59%)
Query: 877 EEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 908
E+ +I++P + ++ P+++ +P ++ M
Sbjct: 237 EDYNEIFQPKNSISRTPPRRSEPFPAPPEDDM 268
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 153 (58.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 63/240 (26%), Positives = 102/240 (42%)
Query: 202 GHLSAVFCVLF---DKLGEVIVTGADDLLIKLWR---ARDG-KLLATLRGCSGEISDIAI 254
GH AV V + D L ++++ + D I+LW R+ K L RG +G + IA+
Sbjct: 138 GHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTERNKIKALHCCRGHAGSVDSIAV 197
Query: 255 DNRNILLAAGTVDKTIRIWNL----------QTL-APISVLVGHQGIITGVNFCPLEVNG 303
D +G+ DK ++IW+ +T P + +T + L +
Sbjct: 198 DASRTKFCSGSWDKMLKIWSAVPSEEEDEYEETSDRPRKKQKTEKMGLTRIPIVTLSGHS 257
Query: 304 ---FNYLASTSTDGCIGFWKYKLDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL 359
+ L S + C W + + I D+ + GN C S+SP
Sbjct: 258 EAVSSVLWSDVDEICSASWDHNIKIWDVETGTVKSTLA-------GNKVFNCISYSPLSQ 310
Query: 360 FLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIW 418
LA+GS D H+R++ D L + + H+ V S++WS SH + VSGS D +W
Sbjct: 311 RLASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLW 370
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 138 (53.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 61/244 (25%), Positives = 111/244 (45%)
Query: 150 SSHKT-SLLVPNSVKVHNTV-----NVLRSREYSGPLSRFLMISSHK----YSNLRQHYV 199
S KT + VPN +K +TV +RS + F+ S K +S RQ ++
Sbjct: 111 SRDKTVRIWVPN-IKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFL 169
Query: 200 -NLG-HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+L H++ V C F G +IV+ +DD +KLW + + + G ++ +
Sbjct: 170 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 229
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+AA +D T+++W+++T + H + ++F P +G NYL + S+D +
Sbjct: 230 GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP---SG-NYLVTASSDSTLK 285
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK--M 375
LD+ + ++ + + G A + +FS G + A+G D V V+K
Sbjct: 286 I----LDLMEGRLLY---TLHGHQ---GPATTV--AFSRTGEYFASGGSDEQVMVWKSNF 333
Query: 376 DGVD 379
D +D
Sbjct: 334 DVID 337
Score = 130 (50.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 193 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 252
+L +H+ GH AV CV F + + +G+ D + +W + G ++ +
Sbjct: 41 SLERHFK--GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 98
Query: 253 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 312
LLA+G+ DKT+RIW +V H + V+FC +G +++ + S
Sbjct: 99 NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCS---DGQSFVTA-SD 154
Query: 313 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
D I W K +F ++ I + C+ FSP G + + S D V++
Sbjct: 155 DKTIKVWSTHRQ----KFLFS----LSQHIN----WVRCAKFSPDGRLIVSASDDKTVKL 202
Query: 373 Y 373
+
Sbjct: 203 W 203
Score = 69 (29.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
VT V + S V A + +K+WD L+Q + H+ V L HP L++A
Sbjct: 221 VTYVDFHPSGTCVAAA-GMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLVTA 278
Query: 512 GHDGLIIIWDILSSK 526
D + I D++ +
Sbjct: 279 SSDSTLKILDLMEGR 293
Score = 69 (29.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 30/120 (25%), Positives = 51/120 (42%)
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
R +++A + + +K+WD + + V H V ++ HP + V +AG D + +WD
Sbjct: 189 RLIVSASD-DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVA-AAGMDNTVKVWD 246
Query: 522 ILSSKQRGYKWFH----NIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRP 577
+ + + + H N + G S D T L G LL Y L G + P
Sbjct: 247 VRTHRLLQHYQLHSAAVNALSFHPSGNYLVTA-SSDSTLKILDLMEGRLL-YTLHGHQGP 304
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 154 (59.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 65/259 (25%), Positives = 108/259 (41%)
Query: 180 LSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL 239
L RF +SSH H N + ++ +L K +VI TG D L+ G++L
Sbjct: 206 LERFTQLSSHPL-----HKTNKPGICSMD-ILHSK--DVIATGGVDATAVLFDRPSGQIL 257
Query: 240 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ---TLAPISVLVGHQGIITGVNF 296
+TL G S +++ + + L+ + DKT+RIW A L H + V
Sbjct: 258 STLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTV 317
Query: 297 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP 356
P Y S S DG W + D+S V + + N ++F P
Sbjct: 318 HPTN----KYFVSASLDGT---WCF---YDLSSGSCLAQVSDDSK----NVDYTAAAFHP 363
Query: 357 GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTAL 416
GL L TG+ V+++ V S + + + H+ +V +I +S + + + DG L
Sbjct: 364 DGLILGTGTSQSVVKIWD---VKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRL 420
Query: 417 IWYYKCSQWR-FIRLDMNT 434
K ++ F+ D N+
Sbjct: 421 WDLRKLRNFKSFLSADANS 439
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 58/222 (26%), Positives = 92/222 (41%)
Query: 363 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 422
T S D VR+++ G + + +HS +V ++ ++ FVS S DGT
Sbjct: 281 TASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGT-------- 332
Query: 423 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG 482
W F L +CL + SD++ K + T A+ D ++ +KIWD +
Sbjct: 333 --WCFYDLSSGSCLA---QVSDDS-KNVDYTAAAFHP-DGLILGTGTSQSVVKIWDVKSQ 385
Query: 483 DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGE 542
V GHT EV + S + L +A DG + +WD+ K R +K F +
Sbjct: 386 ANVAKFDGHTGEVTAI-SFSENGYFLATAAEDG-VRLWDL--RKLRNFKSF---LSADAN 438
Query: 543 GALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPREL 584
FD P G+ + S + VY K N+ + L
Sbjct: 439 SVEFD----PSGSYLGIAAS--DIKVYQTASVKAEWNLIKTL 474
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 171 (65.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 61/210 (29%), Positives = 99/210 (47%)
Query: 216 GEVIVT-GADDLLIKLWRARDGKLLATLRGCSGEISDIAIDN-RNILLAAGTVDKTIRIW 273
G ++++ GA D I + G+ L L G +G I +A+ ++A+G+ DKT+R W
Sbjct: 724 GAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHI--LALYTWSGWMIASGSQDKTVRFW 781
Query: 274 NLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD--GCIGFWKYKLDIDISKTV 331
+L+ + + V VG TG + V+ L +T + C+ + DI + V
Sbjct: 782 DLRVPSCVRV-VGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLY-----DIRGGRMV 835
Query: 332 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEH 390
+ P ++ + FSPG +L TGS D ++V + G + L I+ V EH
Sbjct: 836 --------QSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEH 887
Query: 391 SDKVDSIQWSHSHLRFVSGSRDGTALIWYY 420
DKV +W L F+S S D T +W Y
Sbjct: 888 KDKVIQCRWHTQDLSFLSSSADRTVTLWTY 917
Score = 38 (18.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 54 NVTASFLPKICQRLGPL 70
N+T FL + Q+LG L
Sbjct: 470 NLTEQFLNRSIQKLGEL 486
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 53/191 (27%), Positives = 86/191 (45%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V+F L ++ + ++D IK+W G+L TL+G + ++DIAID L
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQL 163
Query: 262 AAGTVDKTIRIWNL-QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ + D +I++W+ QT + L GH+ ++ V F P G +++ S S D I W
Sbjct: 164 VSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLP---TG-DFVLSASRDHTIKQW- 218
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 380
DI V+ R N + S G A+ S D V V+ +
Sbjct: 219 ---DISTGYCVY--------TFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSA 267
Query: 381 PLGILEVEEHS 391
L +L EH+
Sbjct: 268 KL-VLRDHEHA 277
Score = 142 (55.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 56/228 (24%), Positives = 99/228 (43%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH V V F G+ +++ + D IK W G + T RG + + I I N L
Sbjct: 189 GHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLF 248
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP-----------LEVNGFNYLAST 310
A+ ++D+T+ +W+ T + VL H+ + V + P E N + L S
Sbjct: 249 ASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSG 308
Query: 311 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 370
S D I W +I+ +F ++ +E G A F P G +L + + D +
Sbjct: 309 SRDRSIKAW----NINTGDVLF--TLLAHENWVRGLA------FHPKGKYLISVADDKTL 356
Query: 371 RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
RV+++ + +E EH V ++ + + ++GS D + +W
Sbjct: 357 RVWELSA-QRCMKAIEAHEHF--VSTVAFHQTSPFVITGSVDMSCKVW 401
Score = 134 (52.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 48/191 (25%), Positives = 85/191 (44%)
Query: 345 GNAHILCS-SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 403
G+ H + S +F P G F+ + S DH ++ + + + + H+D V I+ S+
Sbjct: 189 GHEHTVSSVTFLPTGDFVLSASRDHTIKQWD---ISTGYCVYTFRGHNDWVRMIRISNDG 245
Query: 404 LRFVSGSRDGTALIWYYKCSQWRFIRLDMN---TCLPHTKETSDETNKKIKVTMVAWDAS 460
F S S D T +W + + + D C+ +T+ TN VT + +
Sbjct: 246 TLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTA-YTN----VTGQQPEGN 300
Query: 461 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 520
++ + + + IK W+ GD++ L H N V L HP + L+S D + +W
Sbjct: 301 STHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHP-KGKYLISVADDKTLRVW 359
Query: 521 DILSSKQRGYK 531
++ S QR K
Sbjct: 360 EL--SAQRCMK 368
Score = 56 (24.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 284 LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERI 342
L GH+ IT V F PL + +AS S D I W Y+ + +T+ H + + I
Sbjct: 102 LTGHRLPITRVIFHPL----WTIMASCSEDATIKVWDYETG-QLERTLKGHTDAVNDIAI 156
Query: 343 -RPGNAHILCSS 353
G + CSS
Sbjct: 157 DAAGKQLVSCSS 168
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 131 (51.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 62/244 (25%), Positives = 109/244 (44%)
Query: 150 SSHKT-SLLVPNSVKVHNTV-----NVLRSREYSGPLSRFLMISSHK----YSNLRQHYV 199
S KT + VPN VK +TV +RS + + S K +S RQ ++
Sbjct: 80 SRDKTVRIWVPN-VKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFL 138
Query: 200 -NLG-HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 257
+L H++ V C F G +IV+ +DD +KLW + + + G ++ +
Sbjct: 139 FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPS 198
Query: 258 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 317
+AA +D T+++W+ +T + H + ++F P +G NYL + S+D +
Sbjct: 199 GTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP---SG-NYLITASSDSTLK 254
Query: 318 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK--M 375
LD+ + ++ + + G A + +FS G + A+G D V V+K
Sbjct: 255 I----LDLMEGRLLY---TLHGHQ---GPATTV--AFSRTGEYFASGGSDEQVMVWKSNF 302
Query: 376 DGVD 379
D VD
Sbjct: 303 DIVD 306
Score = 130 (50.8 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 188 SHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSG 247
S + +L +H+ GH AV CV F + + +G+ D + +W + G
Sbjct: 5 SQEDPSLERHFK--GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKD 62
Query: 248 EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYL 307
++ + LLA+G+ DKT+RIW +V H + V+FC +G + L
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS---DGQS-L 118
Query: 308 ASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD 367
+ S D + W + + +F+ + + C+ FSP G + + S D
Sbjct: 119 VTASDDKTVKVW----------STHRQRFLFS--LTQHINWVRCAKFSPDGRLIVSASDD 166
Query: 368 HHVRVY 373
V+++
Sbjct: 167 KTVKLW 172
Score = 75 (31.5 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 22/75 (29%), Positives = 35/75 (46%)
Query: 452 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 511
VT V + S I A + +K+WDA L+Q + H+ V L HP L++A
Sbjct: 190 VTYVDFHPSGT-CIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP-SGNYLITA 247
Query: 512 GHDGLIIIWDILSSK 526
D + I D++ +
Sbjct: 248 SSDSTLKILDLMEGR 262
Score = 65 (27.9 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 28/120 (23%), Positives = 49/120 (40%)
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
R +++A + + +K+WD + + + H V ++ HP + +AG D + +WD
Sbjct: 158 RLIVSASD-DKTVKLWDKTSRECIHSYCEHGGFVTYVDFHP-SGTCIAAAGMDNTVKVWD 215
Query: 522 ILSSKQRGYKWFH----NIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRP 577
+ + + H N + G S D T L G LL Y L G + P
Sbjct: 216 ARTHRLLQHYQLHSAAVNALSFHPSGNYLITA-SSDSTLKILDLMEGRLL-YTLHGHQGP 273
Score = 37 (18.1 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 17/55 (30%), Positives = 21/55 (38%)
Query: 1061 PPKEGKEATEPGGSLPVEPEEIQEL-LYHPRPDE---WPQGDRDATCEKIITGLE 1111
PP T P LPV P + L P E PQ +T E I+ L+
Sbjct: 316 PPLTSSSGTLPKMDLPVPPGRDRSLESVQGEPQESISMPQ-TLTSTLEHIVGQLD 369
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 149 (57.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 56/204 (27%), Positives = 89/204 (43%)
Query: 353 SFSPGGLFLATGSGDHHVRVY-KMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR 411
++SP G +LA+ S D + ++ K DG + LE H ++V + WS S + S SR
Sbjct: 52 AWSPCGNYLASCSFDATICIWSKKDGDFECMATLE--GHENEVKCVNWSSSGVYLASCSR 109
Query: 412 DGTALIWYYKCSQWRFIRLDMN-TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINF 470
D +A W W FI D C + S + V V W + +++A ++
Sbjct: 110 DKSA--WI-----WEFIEEDEEYECASVLTDHSQD------VKHVVWSPKENALVSA-SY 155
Query: 471 NFQIKIWDAFNGD--LVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 528
+ IKI+ + D L GH + V+ L H + +S G D ++ IW L S
Sbjct: 156 DNTIKIYKEVDDDWECSHTLIGHESTVWSLSFHS-SGELFVSCGDDKVLKIWKCLKSGPS 214
Query: 529 GYKWFHNI-VEGQGEGALFDGKWS 551
KW + G ++D WS
Sbjct: 215 DVKWISICTIAGYHNRPIYDVDWS 238
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 59/200 (29%), Positives = 90/200 (45%)
Query: 239 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPI--SVLV-GHQGIITGVN 295
L+ L G + ++A + +LA+ DK+IR+W L+ + + SVL+ GHQ + GV+
Sbjct: 6 LSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVS 65
Query: 296 FCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF--HEPVMFNERIRPGNAHILCSS 353
+ N YLAS+S DG W+ + D S HE NE +
Sbjct: 66 WS----NCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHE----NE--------VKACG 109
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE-HSDKVDSIQWSHSHLRFVSGSRD 412
+SP G FLAT S D V ++++ G D V+ HS V + W S S D
Sbjct: 110 WSPSGRFLATCSRDKTVWIWEV-GEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYD 168
Query: 413 GTALIWYYKCSQWR-FIRLD 431
T + + W+ + LD
Sbjct: 169 NTIRFFCEEVDDWQCYCTLD 188
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 59/227 (25%), Positives = 92/227 (40%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL--ATLRGC-SGEISDIAIDNRN 258
GH + V + G + T + D + +W + + A+++ C S ++ +
Sbjct: 100 GHENEVKACGWSPSGRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDR 159
Query: 259 ILLAAGTVDKTIRIW--NLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 316
LA+ + D TIR + + L H + G++F P LAS + DG +
Sbjct: 160 DELASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGP---GPEPQLASCAADGSV 216
Query: 317 GFWKYKLDI---DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
W K D ++ T+ P RP C + FLAT GD+ VRV+
Sbjct: 217 YVWGTKGDRRSWELCGTLERHP-------RPVYDVSWCRTRG----FLATACGDNAVRVF 265
Query: 374 KMDGVDSP--LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 418
DG D LG + HS V+S+ WS S S DG +W
Sbjct: 266 VKDGGDCSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAGDDGYVRLW 312
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 155 (59.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 184 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR-ARDGKLLATL 242
+ I Y+ L + ++ H + C+ I+T +DD+LIKLW +
Sbjct: 50 MQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVF 109
Query: 243 RGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEV 301
G + + I I+ + N A+ ++D+TI++W L + +P L GH+ GVN
Sbjct: 110 EGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE---KGVNCIDYYS 166
Query: 302 NGFN-YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA-HILCSSFSPGGL 359
G YL S + D + W Y+ +KT V E G+A ++ C+SF P
Sbjct: 167 GGDKPYLISGADDRLVKIWDYQ-----NKTC----VQTLE----GHAQNVSCASFHPELP 213
Query: 360 FLATGSGDHHVRVY 373
+ TGS D VR++
Sbjct: 214 IIITGSEDGTVRIW 227
WARNING: HSPs involving 424 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1407 1212 0.00098 123 3 11 22 0.41 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 674
No. of states in DFA: 632 (67 KB)
Total size of DFA: 587 KB (2260 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 101.05u 0.13s 101.18t Elapsed: 00:00:10
Total cpu time: 101.19u 0.13s 101.32t Elapsed: 00:00:10
Start: Thu Aug 15 16:04:30 2013 End: Thu Aug 15 16:04:40 2013
WARNINGS ISSUED: 2