RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6522
(1407 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 129 bits (324), Expect = 3e-33
Identities = 67/324 (20%), Positives = 128/324 (39%), Gaps = 25/324 (7%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D+ LL
Sbjct: 15 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 74
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
A+ + D TI++W+ Q I + GH ++ V+ P +++ S S D I W+
Sbjct: 75 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP----NGDHIVSASRDKTIKMWEV 130
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP 381
+ + H + + G +A+ S D VRV+ + +
Sbjct: 131 QTGYCVKTFTGHREWVR------------MVRPNQDGTLIASCSNDQTVRVWVVATKEC- 177
Query: 382 LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKE 441
E+ EH V+ I W+ G+ K + T
Sbjct: 178 --KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 235
Query: 442 TSDETNK----KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFV 497
T V V + + +++++ + +++WD N ++ L H + V
Sbjct: 236 TGMCLMTLVGHDNWVRGVLFHSGGKFILSC-ADDKTLRVWDYKNKRCMKTLNAHEHFVTS 294
Query: 498 LESHPFDSRVLLSAGHDGLIIIWD 521
L+ H + +++ D + +W+
Sbjct: 295 LDFHK-TAPYVVTGSVDQTVKVWE 317
Score = 124 bits (312), Expect = 1e-31
Identities = 50/344 (14%), Positives = 108/344 (31%), Gaps = 31/344 (9%)
Query: 229 KLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQ 288
K W R L G ++ + ++ + + D TI++W+ +T L GH
Sbjct: 1 KEWIPR-PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 289 GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 348
+ ++F K + + + +
Sbjct: 60 DSVQDISFDH----------------SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN 103
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+ S P G + + S D +++++ V + + H + V ++ + S
Sbjct: 104 VSSVSIMPNGDHIVSASRDKTIKMWE---VQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 160
Query: 409 GSRDGTALIWYYKCSQWRFIRL---DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVI 465
S D T +W + + + C+ E+S + + + +
Sbjct: 161 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 220
Query: 466 TAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 525
+ + + IK+WD G + L GH N V + H + +LS D + +WD +
Sbjct: 221 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNK 279
Query: 526 KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 569
+ H E + + + V+
Sbjct: 280 RCMKTLNAH-------EHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 90.6 bits (223), Expect = 5e-20
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 8/161 (4%)
Query: 160 NSVKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVI 219
+V+V E IS S Y ++ + K G +
Sbjct: 165 QTVRVWVVATKECKAELREHRHVVECISWAPES----SYSSISEATGSETKKSGKPGPFL 220
Query: 220 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 279
++G+ D IK+W G L TL G + + + + + DKT+R+W+ +
Sbjct: 221 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 280
Query: 280 PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ L H+ +T ++F Y+ + S D + W+
Sbjct: 281 CMKTLNAHEHFVTSLDFHKTA----PYVVTGSVDQTVKVWE 317
Score = 88.3 bits (217), Expect = 3e-19
Identities = 50/250 (20%), Positives = 90/250 (36%), Gaps = 31/250 (12%)
Query: 185 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG 244
I + GH V V G+ IV+ + D IK+W + G + T G
Sbjct: 82 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 141
Query: 245 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGF 304
+ + + L+A+ + D+T+R+W + T + L H+ ++ +++ P
Sbjct: 142 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSS 201
Query: 305 ----------------NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 348
+L S S D I W + + V H+
Sbjct: 202 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD------------NW 249
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
+ F GG F+ + + D +RV+ + L H V S+ + + V+
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDYKN-KRCMKTL--NAHEHFVTSLDFHKTAPYVVT 306
Query: 409 GSRDGTALIW 418
GS D T +W
Sbjct: 307 GSVDQTVKVW 316
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 126 bits (316), Expect = 6e-32
Identities = 55/329 (16%), Positives = 105/329 (31%), Gaps = 32/329 (9%)
Query: 193 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 252
+R GHL+ ++ + + ++V+ + D + +W + + + S +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 253 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 312
A +A G +D I+NL+T G E+ G S
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKT-------------REGNVRVSRELAGHTGYLSCCR 150
Query: 313 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
E ++ S +P +G+ D ++
Sbjct: 151 FLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 373 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 432
+ V + H +++I + + F +GS D T ++ + Q
Sbjct: 211 WD---VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD 267
Query: 433 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 492
N +T V++ S R ++ +F +WDA D VL GH
Sbjct: 268 NIICG--------------ITSVSFSKSGRLLLAG-YDDFNCNVWDALKADRAGVLAGHD 312
Query: 493 NEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
N V L D + + D + IW+
Sbjct: 313 NRVSCLGVTD-DGMAVATGSWDSFLKIWN 340
Score = 82.1 bits (201), Expect = 4e-17
Identities = 38/185 (20%), Positives = 62/185 (33%), Gaps = 14/185 (7%)
Query: 189 HKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGE 248
+Q GH V + + V+GA D KLW R+G T G +
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 249 ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLA 308
I+ I A G+ D T R+++ + H II G+ +G L
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFD-LRADQELMTYSHDNIICGITSVSFSKSG-RLLL 286
Query: 309 STSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDH 368
+ D W H+ + C + G+ +ATGS D
Sbjct: 287 AGYDDFNCNVWDALKADRAGVLAGHD------------NRVSCLGVTDDGMAVATGSWDS 334
Query: 369 HVRVY 373
++++
Sbjct: 335 FLKIW 339
Score = 72.1 bits (175), Expect = 9e-14
Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 160 NSVKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVI 219
N++ N +G + + Y + + + V F K G ++
Sbjct: 230 NAICFFPNGNAF----ATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285
Query: 220 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 274
+ G DD +W A L G +S + + + + +A G+ D ++IWN
Sbjct: 286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 70.1 bits (170), Expect = 4e-13
Identities = 49/347 (14%), Positives = 102/347 (29%), Gaps = 49/347 (14%)
Query: 253 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 312
A + + +D RI + L GH I +++ L S S
Sbjct: 24 ACADATLSQITNNIDPVGRI----QMRTRRTLRGHLAKIYAMHWGT----DSRLLVSASQ 75
Query: 313 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
DG + W + I ++ ++ +++P G ++A G D+ +
Sbjct: 76 DGKLIIWDSYTTNKVH------------AIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123
Query: 373 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 432
Y + + + + S + V+ S D T +W + Q
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 433 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 492
V ++ R ++ + K+WD G Q GH
Sbjct: 184 TGD----------------VMSLSLAPDTRLFVSG-ACDASAKLWDVREGMCRQTFTGHE 226
Query: 493 NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 552
+++ + P + + D ++D+ + ++ NI+ G + +S
Sbjct: 227 SDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG-----ITSVSFSK 280
Query: 553 DGTTCALTDSYGHLLVYGLGGFKRPQNIP------RELFFHTDYRTL 593
G + V+ R + L D +
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAV 327
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 121 bits (304), Expect = 5e-30
Identities = 59/334 (17%), Positives = 116/334 (34%), Gaps = 19/334 (5%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
L H S V CV F GE + TG + +++R DG L+A L S D N +
Sbjct: 59 LDHTSVVCCVKFSNDGEYLATGCNKT-TQVYRVSDGSLVARLSDDSAANKDPENLNTSSS 117
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
++ +++ ++ + I + + + + +
Sbjct: 118 PSSDLYIRSVC-FSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD 176
Query: 321 YKLDIDISKTVFHEPVMFNERIRPG---NAHILCSSFSPGGLFLATGSGDHHVRVYKMDG 377
+ +TV + + + + G ++A GS D VRV+ +
Sbjct: 177 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 236
Query: 378 VDSPLGILEVEE----HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 433
+ E H D V S+ ++ VSGS D + +W + + + N
Sbjct: 237 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 296
Query: 434 TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN 493
+ + V VA +D ++++ + + + WD +G+ + +L+GH N
Sbjct: 297 SGTCEVTYIGHKDF----VLSVATTQNDEYILSG-SKDRGVLFWDKKSGNPLLMLQGHRN 351
Query: 494 EVFVLESHPF-----DSRVLLSAGHDGLIIIWDI 522
V + + V + D IW
Sbjct: 352 SVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 82.9 bits (203), Expect = 4e-17
Identities = 55/312 (17%), Positives = 117/312 (37%), Gaps = 21/312 (6%)
Query: 123 NSVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSR 182
+ +V+ + S + + + TS + + + +V ++ +
Sbjct: 83 KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYI-RSVCFSPDGKFLATGAE 141
Query: 183 FLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL 242
+I N + + GH ++ + + G+ +V+G+ D +++W R G+ TL
Sbjct: 142 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 201
Query: 243 RGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL-------APISVLVGHQGIITGVN 295
G + +AAG++D+ +R+W+ +T + GH+ + V
Sbjct: 202 SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 261
Query: 296 FCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS 355
F +G + S S D + W + + S + +L + +
Sbjct: 262 FTR---DG-QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT 317
Query: 356 PGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL------RFVSG 409
++ +GS D V + S +L ++ H + V S+ ++ F +G
Sbjct: 318 QNDEYILSGSKDRGVLFWD---KKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATG 374
Query: 410 SRDGTALIWYYK 421
S D A IW YK
Sbjct: 375 SGDCKARIWKYK 386
Score = 63.3 bits (152), Expect = 8e-11
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 207 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI------L 260
V V + E I++G+ D + W + G L L+G + +A+ N + +
Sbjct: 311 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV 370
Query: 261 LAAGTVDKTIRIWNLQTL 278
A G+ D RIW + +
Sbjct: 371 FATGSGDCKARIWKYKKI 388
Score = 62.1 bits (149), Expect = 2e-10
Identities = 42/322 (13%), Positives = 93/322 (28%), Gaps = 53/322 (16%)
Query: 278 LAPISVLVGHQGIITGVNFCP-LEVNGFNYLASTSTDGCIGFW----KYKLDIDISKTVF 332
L P + H I F L+ T+ + ++D+++ K++
Sbjct: 3 LVPYNQRANHSKPIPP--FLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLD 60
Query: 333 HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD---------------G 377
H + + C FS G +LATG + +VY++
Sbjct: 61 HT------------SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANK 107
Query: 378 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP 437
L + S+ +S +G+ D IW + + I +
Sbjct: 108 DPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY 167
Query: 438 HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFV 497
+ + + + ++IWD G + V
Sbjct: 168 SL-----------------DYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT-LSIEDGVTT 209
Query: 498 LESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTC 557
+ P D + + + D + +WD + N + +++ ++ DG +
Sbjct: 210 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV 269
Query: 558 ALTDSYGHLLVYGLGGFKRPQN 579
+ ++ L +
Sbjct: 270 VSGSLDRSVKLWNLQNANNKSD 291
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 117 bits (293), Expect = 1e-28
Identities = 39/367 (10%), Positives = 107/367 (29%), Gaps = 37/367 (10%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK----LLATLRGCSGEISDIAID-- 255
H + +F V V+ + D +K+W + + + +D
Sbjct: 12 AHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 256 -------NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG----- 303
L+A + + + + ++ + + +
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129
Query: 304 ------FNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNE------RIRPGNAHILC 351
+ L +T G WK+ D S ++ E +
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATS 189
Query: 352 SSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS---DKVDSIQWSHSHLRFVS 408
S GL +ATG + V++ ++ + + + S+++S
Sbjct: 190 VDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 248
Query: 409 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 468
+ +++ ++ ++ + E V ++++ S + +
Sbjct: 249 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS-A 307
Query: 469 NFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 528
++ +++ WD + + L H +++ + E S G+ + + +
Sbjct: 308 GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 367
Query: 529 GYKWFHN 535
G N
Sbjct: 368 GMGADLN 374
Score = 67.6 bits (163), Expect = 4e-12
Identities = 45/364 (12%), Positives = 90/364 (24%), Gaps = 95/364 (26%)
Query: 276 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEP 335
+A + H I V+ C ++ S S DG + W D + +
Sbjct: 2 VFIATANAGKAHDADIFSVSACN------SFTVSCSGDGYLKVW----DNKLLDNENPKD 51
Query: 336 VMFNERIRPGNAHILC-----SSFSPGGLFLATGSGDHHVRVYKMDGVD-------SPLG 383
++ + H + + +AT S + Y++ D L
Sbjct: 52 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD 111
Query: 384 ILEVEEHSDKVDSIQWSHS-----HLRFVSGSRDGTALIWYYK----------------- 421
+L+ + +++W S R V+ GT IW +
Sbjct: 112 LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTL 171
Query: 422 -----------------------------CSQWRFIRLDMNTCLPHTKETSDETNKKIKV 452
+++ + L + +
Sbjct: 172 ELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 231
Query: 453 TMVAWDASDRWVITAI-----NFNFQIKIWD-------------AFNGDLVQVLKGHTNE 494
+ N I +++ + H++
Sbjct: 232 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 291
Query: 495 VFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDG 554
V L + L SAG DG + WD+ + ++ H E G
Sbjct: 292 VMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMH---CDDIEIEEDILAVDEHG 347
Query: 555 TTCA 558
+ A
Sbjct: 348 DSLA 351
Score = 60.3 bits (144), Expect = 7e-10
Identities = 22/173 (12%), Positives = 52/173 (30%), Gaps = 6/173 (3%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
H + S+ +S VS S DG +W K + + H
Sbjct: 13 HDADIFSVSACNSFT--VSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV-- 68
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 509
+ + DA + ++ +F+ + + D + + ++ + L
Sbjct: 69 --LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126
Query: 510 SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDS 562
+ ++ ++++ +G + E WSP +S
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVES 179
Score = 48.3 bits (113), Expect = 4e-06
Identities = 30/258 (11%), Positives = 70/258 (27%), Gaps = 44/258 (17%)
Query: 136 SREYSGPLSRSLMISSHKTSLLVPNSVKVHNTVNVLRSREYSGPLSRFLMISSHKYSNLR 195
+ +S L + S T SV + ++ + +G + + + N
Sbjct: 164 TLNWSPTLELQGTVESPMTPSQFATSVDISER-GLIATGFNNGTVQISELSTLRPLYNFE 222
Query: 196 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----------------GKLL 239
+ + + +++ V F G ++ D + +
Sbjct: 223 SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQAS 282
Query: 240 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 299
S + ++ ++ L + D +R W+++T I+ L H I
Sbjct: 283 LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILA 342
Query: 300 EVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL 359
+ LA G + K ++ +
Sbjct: 343 VDEHGDSLAEP------GVFDVKFLKKGWRSG---------------------MGADLNE 375
Query: 360 FLATGSGDHHVRVYKMDG 377
L D +R ++ G
Sbjct: 376 SLCCVCLDRSIRWFREAG 393
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 110 bits (275), Expect = 1e-26
Identities = 55/355 (15%), Positives = 119/355 (33%), Gaps = 49/355 (13%)
Query: 231 WRARDGKLLATLRGCSGEI-SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQG 289
WR + K L+G + + + + +G+ D T+++W+ T + LVGH G
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGN--RIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58
Query: 290 IITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI 349
+ + + + + TV + +
Sbjct: 59 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 118
Query: 350 LCSSFSPGG--------------------LFLATGSGDHHVRVYKMDGVDSPLGILEVEE 389
L G + +G+ D V+V+ + + ++
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC---LHTLQG 175
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
H+++V S+Q+ H+ VSGS D + +W + T
Sbjct: 176 HTNRVYSLQFDGIHV--VSGSLDTSIRVWDVETGNCIH------------------TLTG 215
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 509
+ + D +++ + +KIWD G +Q L+G + F+ ++
Sbjct: 216 HQSLTSGMELKDNILVSGNADS-TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 274
Query: 510 SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYG 564
++ DG + +WD+ + + + + G G ++ + S CA+ G
Sbjct: 275 TSSDDGTVKLWDLKTGEF--IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 327
Score = 81.8 bits (200), Expect = 7e-17
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 219 IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 278
+V+GA D ++K+W L TL+G + + + D ++ +G++D +IR+W+++T
Sbjct: 150 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHV--VSGSLDTSIRVWDVETG 207
Query: 279 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMF 338
I L GHQ + +G+ N L S + D + W K + +
Sbjct: 208 NCIHTLTGHQSLTSGMELKD------NILVSGNADSTVKIWDIK---------TGQCLQT 252
Query: 339 NERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD--GVDSPLGILEVEEHSDKVDS 396
+ + + C F+ F+ T S D V+++ + L LE V
Sbjct: 253 LQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWR 310
Query: 397 IQWSHSHLRFVSGSRDGTA----LIW 418
I+ S++ L GSR+GT L+
Sbjct: 311 IRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 69.8 bits (169), Expect = 5e-13
Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 14/172 (8%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + +L
Sbjct: 175 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--IL 230
Query: 262 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+G D T++IW+++ L QG + N++ ++S DG + W
Sbjct: 231 VSGNADSTVKIWDIK---TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 287
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
K + + + S L A GS +
Sbjct: 288 K-----TGEFIRN--LVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK 332
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 92.9 bits (229), Expect = 1e-20
Identities = 28/318 (8%), Positives = 77/318 (24%), Gaps = 17/318 (5%)
Query: 218 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 277
V D LI R + + TL + + I N + G +++W++
Sbjct: 24 QPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISH 81
Query: 278 LAPISVL-----VGHQGIITGVNFCP---LEVNGFNYLASTSTDGCIGFWKYKLDIDISK 329
S + + I P + G + D + K ++ S
Sbjct: 82 PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSA 141
Query: 330 TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE 389
+ + + + + S G
Sbjct: 142 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGT----ALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 445
D + + ++ + +
Sbjct: 202 GLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261
Query: 446 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 505
+ V + + +W ++ + + W G + ++ V + D
Sbjct: 262 HLHESCVLSLKFAYCGKWFVST-GKDNLLNAWRTPYGASIFQS-KESSSVLSCDISV-DD 318
Query: 506 RVLLSAGHDGLIIIWDIL 523
+ +++ D +++++
Sbjct: 319 KYIVTGSGDKKATVYEVI 336
Score = 66.0 bits (159), Expect = 8e-12
Identities = 41/310 (13%), Positives = 86/310 (27%), Gaps = 55/310 (17%)
Query: 201 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR-----GCSGEISDIAID 255
L H V V + TG +K+W + + I +
Sbjct: 48 LNHGEVVCAVTISNPTRHVYTGGKGC-VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL 106
Query: 256 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 315
L G T+ IW+L P + + + +
Sbjct: 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 316 IGFWKYKLDI---------------------------DISKTVFHEPVMFNERIRPGNAH 348
+ + + D + + + +
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ 226
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
I + P G +LA G +V V ++ D ++ H V S+++++ FVS
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY----QLHLHESCVLSLKFAYCGKWFVS 282
Query: 409 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 468
+D W R + +KE+S V D++++T
Sbjct: 283 TGKDNLLNAW----------RTPYGASIFQSKESSS-------VLSCDISVDDKYIVTG- 324
Query: 469 NFNFQIKIWD 478
+ + + +++
Sbjct: 325 SGDKKATVYE 334
Score = 60.6 bits (145), Expect = 5e-10
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 1/87 (1%)
Query: 189 HKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGE 248
+ N Y H S V + F G+ V+ D L+ WR G + S
Sbjct: 250 VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSS 308
Query: 249 ISDIAIDNRNILLAAGTVDKTIRIWNL 275
+ I + + G+ DK ++ +
Sbjct: 309 VLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 54.0 bits (128), Expect = 6e-08
Identities = 22/240 (9%), Positives = 55/240 (22%), Gaps = 20/240 (8%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVD--SPLGILEVEEHSDKVDSIQWSHSHLRF 406
+ + S + TG V+V+ + SP+ L+ + + S +
Sbjct: 54 VCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTL 112
Query: 407 VSGSRDGTALIWYYKCSQWRFIR-----------------LDMNTCLPHTKETSDETNKK 449
+ G T IW R + +
Sbjct: 113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 172
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 509
+ +D I+ + + + ++ + +
Sbjct: 173 QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGY 232
Query: 510 SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 569
+ L + + + + E + K++ G T L +
Sbjct: 233 CPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW 292
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 93.0 bits (229), Expect = 1e-20
Identities = 56/354 (15%), Positives = 123/354 (34%), Gaps = 44/354 (12%)
Query: 202 GHLSAVF-CVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 260
GH+++V C+ F+ ++TGADD +I+++ + + K L L G G + + + IL
Sbjct: 10 GHMTSVITCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGIL 67
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
++ T + T +E Y+ + S D + WK
Sbjct: 68 VSGSTDRTVRVWDIKKGCCTHVF---EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 321 YKLDIDISKT--------VFHEPVMFNERIRPGNAHIL-CSSFSPGGLFLATGSGDHHVR 371
+ + VFH P + H+ + S G + +GS D+ +
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLI 184
Query: 372 VYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLD 431
V+ + + + H+D++ S + H R +S S D T IW + + +
Sbjct: 185 VWDVAQMKCL---YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241
Query: 432 MNT----------------------CLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN 469
+ + ++ + ++ + +
Sbjct: 242 HTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 301
Query: 470 FNFQIKIWDAFNGDLVQV-LKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
N Q I++ +G LV + ++++ + ++ + DG + +
Sbjct: 302 EN-QFNIYNLRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEIL 352
Score = 51.8 bits (122), Expect = 4e-07
Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Query: 185 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL-ATLR 243
S + H + + + + + I+ + ++ R GKL+ A +
Sbjct: 262 DGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANIL 321
Query: 244 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 275
+ +I + + L+AA D + L
Sbjct: 322 KDADQIWSVNFKGKT-LVAAVEKDGQSFLEIL 352
Score = 42.6 bits (98), Expect = 3e-04
Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 487 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALF 546
L+GH V F+ +++ D +I ++D ++ K H +G ++
Sbjct: 7 TLRGHMTSVITCLQ--FEDNYVITGADDKMIRVYDSINKKFLLQLSGH-------DGGVW 57
Query: 547 DGKWSPDGT 555
K++ G
Sbjct: 58 ALKYAHGGI 66
Score = 39.1 bits (89), Expect = 0.004
Identities = 9/138 (6%), Positives = 34/138 (24%), Gaps = 18/138 (13%)
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 449
H V + ++G+ D ++ ++ + H
Sbjct: 11 HMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKF------LLQLSGHDGG-------- 55
Query: 450 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 509
V + + A +++ ++ + + + ++
Sbjct: 56 --VWALKY-AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIV 112
Query: 510 SAGHDGLIIIWDILSSKQ 527
+ D + +W +
Sbjct: 113 TGSRDNTLHVWKLPKESS 130
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 91.4 bits (225), Expect = 1e-20
Identities = 57/338 (16%), Positives = 106/338 (31%), Gaps = 57/338 (16%)
Query: 193 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 252
+L++ + V+C+ +D + IV+G D IK+W + L G +G + +
Sbjct: 4 SLQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61
Query: 253 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 312
D + V + TG L + L
Sbjct: 62 QYD-----------------ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 104
Query: 313 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 372
+G + I + + + A + F + + SGD ++V
Sbjct: 105 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIV--SASGDRTIKV 162
Query: 373 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 432
+ ++ + K + VSGS D T +W +C +
Sbjct: 163 W-----NTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 217
Query: 433 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD--------- 483
+ D I + ++ +IK+WD
Sbjct: 218 EELVR-------------------CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 258
Query: 484 LVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
++ L H+ VF L+ FD ++S+ HD I+IWD
Sbjct: 259 CLRTLVEHSGRVFRLQ---FDEFQIVSSSHDDTILIWD 293
Score = 58.3 bits (139), Expect = 2e-09
Identities = 28/209 (13%), Positives = 60/209 (28%), Gaps = 30/209 (14%)
Query: 352 SSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR 411
+ +G D+ ++++ ++ + H+ V +Q+ + S
Sbjct: 19 YCLQYDDQKIVSGLRDNTIKIWD---KNTLECKRILTGHTGSVLCLQYDERVIITGSSDS 75
Query: 412 DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDAS----------- 460
I T K + ++ WD +
Sbjct: 76 TVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR-SIAVWDMASPTDITLRRVL 134
Query: 461 ------------DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 508
D I + + + IK+W+ + V+ L GH + + R++
Sbjct: 135 VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC---LQYRDRLV 191
Query: 509 LSAGHDGLIIIWDILSSKQRGYKWFHNIV 537
+S D I +WDI H +
Sbjct: 192 VSGSSDNTIRLWDIECGACLRVLEGHEEL 220
Score = 37.5 bits (85), Expect = 0.008
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 485 VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
+ + V+ L+ +D + ++S D I IWD + +
Sbjct: 8 IHCRSETSKGVYCLQ---YDDQKIVSGLRDNTIKIWDKNTLEC 47
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 88.5 bits (217), Expect = 2e-19
Identities = 34/297 (11%), Positives = 86/297 (28%), Gaps = 19/297 (6%)
Query: 235 DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 294
++L T+ G + I+ + ++ L +G+ D I W+ + + H +I +
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS-----MHQDHSNLIVSL 52
Query: 295 NFCP---LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILC 351
+ ++ + F + F + ++ + +
Sbjct: 53 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112
Query: 352 SSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR 411
S + V + + + ++ + D + ++S S
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISP 172
Query: 412 DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDA----SDRWVITA 467
T + + L I A + ++
Sbjct: 173 SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT 232
Query: 468 INFNFQIKIWD-AFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
+ + I I+ +++ L H + V L L+S+G D I W+++
Sbjct: 233 GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRWNVV 287
Score = 50.7 bits (119), Expect = 5e-07
Identities = 13/91 (14%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 185 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD-GKLLATLR 243
+ +S + + + +++ TG+ D I ++ + K++ L
Sbjct: 196 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN 255
Query: 244 GCSGEISDIAIDNRNILLAAGTVDKTIRIWN 274
++++ + + L+++G D I+ WN
Sbjct: 256 AHKDGVNNLLWETPSTLVSSGA-DACIKRWN 285
Score = 45.7 bits (106), Expect = 2e-05
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 481 NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
+ ++++ + GH + L +P L+S +DG I+ W S Q
Sbjct: 2 HDEVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMHQ 43
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 85.8 bits (210), Expect = 1e-18
Identities = 40/299 (13%), Positives = 78/299 (26%), Gaps = 15/299 (5%)
Query: 236 GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV-GHQGIITGV 294
G + G + I+ ++ L + + I W++ T V H +ITG+
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 295 NFCPLEVNGFN--------YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 346
A S KL +
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 121
Query: 347 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 406
I S + V + V + S S + H
Sbjct: 122 IAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAE 181
Query: 407 VSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 466
++ + Q R + T+ T KV V+W + + T
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Query: 467 AINFNFQIKIWDAFNGDLVQVLK---GHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
+ + + +W+ ++ + V + + ++SAG D I W++
Sbjct: 242 G-SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL--NETTIVSAGQDSNIKFWNV 297
Score = 51.5 bits (121), Expect = 3e-07
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 482 GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
G + QV GH + L S D + L SA +G I WDI +
Sbjct: 2 GSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGIS 46
Score = 41.9 bits (96), Expect = 3e-04
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 219 IVTGADDLLIKLWRARDGKLLATLR---GCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 275
+ TG+ D + +W + ++ + N +++AG D I+ WN+
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQ-DSNIKFWNV 297
Score = 29.6 bits (64), Expect = 2.4
Identities = 9/57 (15%), Positives = 19/57 (33%)
Query: 176 YSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR 232
+G L +++ + + + H + + IV+ D IK W
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 86.1 bits (211), Expect = 3e-18
Identities = 41/358 (11%), Positives = 96/358 (26%), Gaps = 33/358 (9%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK--LLATLRGCSGEISDIAIDNRNIL 260
+ + C ++K I ++ + ++ K + L+ +G+++ + +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 261 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 320
+ D+ +W L+ LV + + S S I +++
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125
Query: 321 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL-----FLATGSGDHHVRVYKM 375
+ D + K + + +L ++ S +
Sbjct: 126 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 185
Query: 376 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTC 435
+ + E V + +S + R S D T +
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP 245
Query: 436 LPHTKETSDET----------------NKKIKVTMVAW-DASDRWVITAINFNFQIKIWD 478
L ++ + + K++ D + + + + D
Sbjct: 246 LLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD 305
Query: 479 AF------NGDLVQVLKGHTNEVF---VLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 527
+ H N V VL + G DG + IWD+ S +
Sbjct: 306 KKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 363
Score = 81.8 bits (200), Expect = 8e-17
Identities = 49/284 (17%), Positives = 92/284 (32%), Gaps = 20/284 (7%)
Query: 249 ISDIAIDNRNILLAAGTVDKTIRIWNLQT--LAPISVLVGHQGIITGVNFCPLEVNGFNY 306
IS A + +A + + I+ + L H G +TGV++ P + N
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP---DS-NR 65
Query: 307 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 366
+ + TD W K V +R + S
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR-------- 117
Query: 367 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW--YYKCSQ 424
Y D + + V S+ W + + +GS D I+ Y K +
Sbjct: 118 -VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVE 176
Query: 425 WRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL 484
R + +P + + ++ V V + A+ V + + + + DA
Sbjct: 177 ERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS-TVCLADADKKMA 235
Query: 485 VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 528
V L T + + S L++AGHD +++ S+ +
Sbjct: 236 VATLASETLPLLAVTFITESS--LVAAGHDCFPVLFTYDSAAGK 277
Score = 76.4 bits (186), Expect = 4e-15
Identities = 36/246 (14%), Positives = 71/246 (28%), Gaps = 2/246 (0%)
Query: 349 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 408
I C +++ +A +H V +Y+ G + + + E++EH+ +V + W+ R V+
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSG-NKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 409 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 468
D A +W K W+ + + KK V +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV-ISICYFEQE 127
Query: 469 NFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 528
N + K V L H N V + + SA + +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 187
Query: 529 GYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHT 588
G + +S +G+ A + + + E
Sbjct: 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 247
Query: 589 DYRTLN 594
+
Sbjct: 248 AVTFIT 253
Score = 47.9 bits (112), Expect = 5e-06
Identities = 28/225 (12%), Positives = 55/225 (24%), Gaps = 22/225 (9%)
Query: 165 HNTVNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGAD 224
+ + K + + V V F G + +
Sbjct: 162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH 221
Query: 225 DLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL 284
D + L A +ATL + + + + L+AAG D ++ + A
Sbjct: 222 DSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSF 280
Query: 285 VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 344
G + + G + H+
Sbjct: 281 GGRLDVPKQSSQR-----GLTARERFQNLDKKASSEGSAAAGAGLDSLHK---------- 325
Query: 345 GNAHILCSSFSPGG----LFLATGSGDHHVRVYKMDGVDSPLGIL 385
+ S GG T D + ++ + ++S L L
Sbjct: 326 --NSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDL 368
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 81.8 bits (200), Expect = 6e-17
Identities = 24/322 (7%), Positives = 74/322 (22%), Gaps = 17/322 (5%)
Query: 217 EVIVTGADDLLIKLWRARDGKLLATLRGCS--GEISDIAID-NRNILLAAGTVDKTIRIW 273
+ I+ A + + + + + I A +++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 274 NLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH 333
+L T + + + ++ + + ++
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 334 EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK 393
+ + I +++ G L D HV + +
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDK------PIQSW 175
Query: 394 VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKV- 452
L + + + ++ D ET +
Sbjct: 176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235
Query: 453 -----TMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 507
A + A ++ +D ++ + + + + D
Sbjct: 236 VRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVST-DGST 293
Query: 508 LLSAGHDGLIIIWDILSSKQRG 529
+ G G + +D + +++G
Sbjct: 294 VWLGGALGDLAAYDAETLEKKG 315
Score = 44.0 bits (102), Expect = 8e-05
Identities = 6/103 (5%), Positives = 23/103 (22%), Gaps = 7/103 (6%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 261
F + +++ + + + + + +
Sbjct: 238 IMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTV 294
Query: 262 AAGTVDKTIRIWNLQTLAPISVLV----GHQGIITGVNFCPLE 300
G + ++ +TL + + + F E
Sbjct: 295 WLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRDE 337
Score = 33.2 bits (74), Expect = 0.20
Identities = 35/313 (11%), Positives = 71/313 (22%), Gaps = 32/313 (10%)
Query: 122 PNSVKVHNTVN--VLRS--REYSGPLSRSLMISSHKTSLLVPNS----VKVHNTVN--VL 171
P+ + V +T V + +GP M++ + + + V L
Sbjct: 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL 69
Query: 172 RSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLW 231
+ S P R + S + + E+ + L+
Sbjct: 70 GRIDLSTPEERVKSLFGAALSPDGKT---------LAIYESPVRLELTHFEVQPTRVALY 120
Query: 232 RARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGII 291
A +I+ +A L D + TL V + I
Sbjct: 121 DAETLSRRKA-FEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTL------VEDKPIQ 173
Query: 292 TGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILC 351
+ + + + G + Y DI + +
Sbjct: 174 SWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233
Query: 352 SSFSP-GGLFLATGSGDHHVRVYKMDGVDS-----PLGILEVEEHSDKVDSIQWSHSHLR 405
+ +T R + V ++ S+ S
Sbjct: 234 REVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGST 293
Query: 406 FVSGSRDGTALIW 418
G G +
Sbjct: 294 VWLGGALGDLAAY 306
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 78.8 bits (192), Expect = 4e-16
Identities = 35/309 (11%), Positives = 69/309 (22%), Gaps = 30/309 (9%)
Query: 238 LLATL-RGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 296
L +L R G + + ++ + +L + H T
Sbjct: 8 LFPSLPRTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKT 66
Query: 297 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT-----------------------VFH 333
P Y AS G + W I KT V
Sbjct: 67 SP----SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGE 122
Query: 334 EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK 393
F + + D+ + I E K
Sbjct: 123 GRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK 182
Query: 394 VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVT 453
+ + + + +D ++ V
Sbjct: 183 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 242
Query: 454 MVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH 513
+ W + +A + + IKIW+ + + + T + + L+S
Sbjct: 243 GLTWSPDGTKIASA-SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 301
Query: 514 DGLIIIWDI 522
+G I +
Sbjct: 302 NGFINFVNP 310
Score = 51.1 bits (120), Expect = 4e-07
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Query: 188 SHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSG 247
+ N+ H +VF + + G I + + D IK+W K+ T+ +
Sbjct: 222 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 281
Query: 248 -EISDIAIDNRNILLAAGTVDKTIRIWNL 275
E + I L + + + I N
Sbjct: 282 IEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 41.0 bits (94), Expect = 7e-04
Identities = 37/289 (12%), Positives = 75/289 (25%), Gaps = 27/289 (9%)
Query: 192 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG--KLLATLRGCSGEI 249
+L + H G +G +++W L T+ SG +
Sbjct: 46 GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPV 105
Query: 250 SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAS 309
DI+ D+ + +AA + S + F ++
Sbjct: 106 KDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISG 165
Query: 310 TSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 369
+ + F + + V G+ L+
Sbjct: 166 SDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTG 225
Query: 370 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIR 429
V + HS V + WS + S S D T IW
Sbjct: 226 VFEDDSL---------KNVAHSGSVFGLTWSPDGTKIASASADKTIKIW----------- 265
Query: 430 LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD 478
++ T E + +I+ + + + +++ + N I +
Sbjct: 266 -NVATL---KVEKTIPVGTRIEDQQLGIIWTKQALVSI-SANGFINFVN 309
Score = 37.6 bits (85), Expect = 0.008
Identities = 11/72 (15%), Positives = 18/72 (25%), Gaps = 11/72 (15%)
Query: 305 NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 364
+AS S D I W ++ K PV L +
Sbjct: 251 TKIASASADKTIKIW----NVATLKVEKTIPV-------GTRIEDQQLGIIWTKQALVSI 299
Query: 365 SGDHHVRVYKMD 376
S + + +
Sbjct: 300 SANGFINFVNPE 311
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 75.7 bits (184), Expect = 6e-15
Identities = 36/334 (10%), Positives = 75/334 (22%), Gaps = 48/334 (14%)
Query: 237 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV---GHQGIITG 293
+++ + ISDI I LL + D ++ ++ A L+ ++ +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 294 VNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNE------------- 340
NF N + + G I +E +
Sbjct: 62 CNFID---NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAA 118
Query: 341 ------------------------RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK-M 375
+ L G + V+ ++
Sbjct: 119 SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178
Query: 376 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTC 435
D I E D + S DG + ++ Q
Sbjct: 179 LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD-DQGDDYNSSKRFA 237
Query: 436 LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 495
+ +TN V + + + + I W+ ++ +
Sbjct: 238 FRCHRLNLKDTNLAYPVNSIEFS-PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS 296
Query: 496 FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRG 529
V + +L A D +
Sbjct: 297 VVKIA--CSDNILCLATSDDTFKTNAAIDQTIEL 328
Score = 59.5 bits (142), Expect = 1e-09
Identities = 34/284 (11%), Positives = 73/284 (25%), Gaps = 47/284 (16%)
Query: 346 NAH---ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS-H 401
A I P L S D + VYK D + +L+ + + + +
Sbjct: 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN 67
Query: 402 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 461
+ L+ G+ G L S + L + +K I +
Sbjct: 68 TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVI 127
Query: 462 RWVITAINFNF--------------------------------QIKIWDAFNGDLVQV-- 487
Q++ + +
Sbjct: 128 DPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTI 187
Query: 488 -LKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI-------LSSKQRGYKWFHNIVEG 539
G ++ + P + + DG + + SSK+ ++ ++
Sbjct: 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD 247
Query: 540 QGEGALFDG-KWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPR 582
+ ++SP S G + + L K+ +N +
Sbjct: 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 75.3 bits (183), Expect = 7e-15
Identities = 32/326 (9%), Positives = 80/326 (24%), Gaps = 26/326 (7%)
Query: 205 SAVFCVLFDKLGEVIVTGA-DDLLIKLWRARDGKL--LATLRG-CSGEISDIAI--DNRN 258
+ + +D I ++ D K+ + G S ++ + +
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 259 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 318
L +G + +W + + + V P+ + ++ +
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI-----SDISWDFEGRRLCV 132
Query: 319 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGV 378
D + E C + T D V Y+
Sbjct: 133 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF 192
Query: 379 DSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPH 438
+ V +++S FV + + S ++ +
Sbjct: 193 KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ 252
Query: 439 TKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVL 498
+ T + I++WD VQ ++
Sbjct: 253 GG------------IFALSWLDSQKFATV-GADATIRVWDVTTSKCVQKWTLDKQQLGNQ 299
Query: 499 ES--HPFDSRVLLSAGHDGLIIIWDI 522
+ + ++S DG + +++
Sbjct: 300 QVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 66.9 bits (161), Expect = 4e-12
Identities = 36/313 (11%), Positives = 82/313 (26%), Gaps = 24/313 (7%)
Query: 247 GEISDIAIDNRNILLAAGTVDKT-IRIWNL--QTLAPISVLVGHQG-IITGVNFCPLEVN 302
+ ++ D +A +R + + P+ GH ++T V F P++
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK-G 76
Query: 303 GFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLA 362
YL S G + W + D + V + I S+
Sbjct: 77 S-QYLCSGDESGKVIVWGWTFDKES----NSVEVNVKSEFQVLAGPISDISWDF------ 125
Query: 363 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 422
+ +G D+ + + + + S +
Sbjct: 126 ----EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181
Query: 423 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG 482
F + + + + V + D+ + + + +
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF-SPDSGEFVITVGSDRKISCFDGKSGEF 240
Query: 483 DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGE 542
+ + DS+ + G D I +WD+ +SK G +
Sbjct: 241 LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQ 300
Query: 543 GALFDGKWSPDGT 555
+ + +G
Sbjct: 301 VGVV---ATGNGR 310
Score = 49.9 bits (117), Expect = 1e-06
Identities = 26/194 (13%), Positives = 56/194 (28%), Gaps = 12/194 (6%)
Query: 346 NAHILCSSFSPGGLFLATGSGDH-HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS--HS 402
S+ P +A G VR P + S V ++++S
Sbjct: 17 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKG 76
Query: 403 HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDA-SD 461
SG G +I + +++N ++ ++WD
Sbjct: 77 SQYLCSGDESGK-VIVWGWTFDKESNSVEVNVKSEFQVLAGP-------ISDISWDFEGR 128
Query: 462 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 521
R + + +G+ + + GH+ + ++ G DG ++ +
Sbjct: 129 RLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQ 188
Query: 522 ILSSKQRGYKWFHN 535
K H+
Sbjct: 189 GPPFKFSASDRTHH 202
Score = 28.0 bits (60), Expect = 9.0
Identities = 15/78 (19%), Positives = 21/78 (26%), Gaps = 6/78 (7%)
Query: 491 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKW 550
N L P + + G + D SK F G G + K+
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQF----TGHGSSVVTTVKF 71
Query: 551 SP--DGTTCALTDSYGHL 566
SP D G +
Sbjct: 72 SPIKGSQYLCSGDESGKV 89
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 69.8 bits (169), Expect = 5e-13
Identities = 28/348 (8%), Positives = 76/348 (21%), Gaps = 37/348 (10%)
Query: 252 IAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL-VGHQGIITGVNFCPLEVNGFNYLAST 310
A+ + + + + ++ + + + P +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP---DNRTAYVLN 58
Query: 311 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 370
+ G I D+ + + + SP G +
Sbjct: 59 NHYGDIYGI------DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQR 112
Query: 371 RVYKMDGVDSPLGILEVEE-HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQW---- 425
L + + K + + + DG+ + +
Sbjct: 113 LNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKT 172
Query: 426 -----------RFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQI 474
+ + + ++ + +A D+ + +
Sbjct: 173 GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 232
Query: 475 KIWDAFNGDLVQVLKG-HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 533
D G T F P D + + + +D+ K
Sbjct: 233 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR--LAKYDLKQRKLIKAANL 290
Query: 534 HNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIP 581
+ + G L ++ L V+ ++ +NI
Sbjct: 291 DHTYYCVA--------FDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330
Score = 66.3 bits (160), Expect = 7e-12
Identities = 23/329 (6%), Positives = 73/329 (22%), Gaps = 24/329 (7%)
Query: 216 GEVIVTGADDLLIKLWRARDGKLLATLRGCSG-EISDIAID-NRNILLAAGTVDKTIRIW 273
E ++ + + + + + + I
Sbjct: 8 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI 67
Query: 274 NLQTLAPI-SVLVGHQGIITGVNFCPLEVNGF-NYLASTSTDGCIGFWKYKLDIDISKTV 331
+L T + G + ++ + +T Y + +
Sbjct: 68 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVF 127
Query: 332 FHEPVMFNERIRPGNAH--ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE 389
+ + +R + + G G + + V
Sbjct: 128 STADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGK-------YTVALP 180
Query: 390 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL---------PHTK 440
+ + L F Y ++++ + D T T
Sbjct: 181 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTG 240
Query: 441 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 500
+T + + S + ++ +D L++ + + +
Sbjct: 241 KTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAF 299
Query: 501 HPFDSRVLLSAGHDGLIIIWDILSSKQRG 529
L G + +++ + ++
Sbjct: 300 DK-KGDKLYLGGTFNDLAVFNPDTLEKVK 327
Score = 41.3 bits (95), Expect = 6e-04
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 5/97 (5%)
Query: 203 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 262
F L + G + + + + KL+ +A D + L
Sbjct: 250 LTELYFTGLRSPKDPNQIYGVLNR-LAKYDLKQRKLIKAANLDHT-YYCVAFDKKGDKLY 307
Query: 263 AGTVDKTIRIWNLQTLAPISVL---VGHQGIITGVNF 296
G + ++N TL + + G T F
Sbjct: 308 LGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVF 344
Score = 35.9 bits (81), Expect = 0.032
Identities = 31/292 (10%), Positives = 62/292 (21%), Gaps = 56/292 (19%)
Query: 110 YIARQHGTSLLV--PNSVKVHNTVNVLRSREYSGPLSRSLMISSHKTSLLVPNSVKVHNT 167
Y+ H + ++ K N+ G S IS + +
Sbjct: 55 YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN---PTQ 111
Query: 168 VNVLRSREYSGPLSRFLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLL 227
L F + +R + V+ + G + V G D
Sbjct: 112 RLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ----VYLMRAADDGSLYVAGPDI-- 165
Query: 228 IKLWRARDGKLLATLRGCSGEIS-------------------------DIAIDNRNILLA 262
+ GK L + + A
Sbjct: 166 -YKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPA 224
Query: 263 AGTVDKTIRIWNLQTLAPISVLVG-HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 321
+ +L+T + + P + +
Sbjct: 225 TADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSP----KDPNQIYGV-LNRLAKY-- 277
Query: 322 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 373
D+ K + + + C +F G L G + + V+
Sbjct: 278 --DLKQRKLI---------KAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVF 318
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 66.8 bits (161), Expect = 5e-12
Identities = 32/330 (9%), Positives = 72/330 (21%), Gaps = 29/330 (8%)
Query: 199 VNLGHLSAVFCVLFDKLGEVIVTGADD--LLIKLWRARDGKLLATLRGCSGEISDIAIDN 256
+ + + V +V + ++ R GK G + + +D
Sbjct: 37 LKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDR 95
Query: 257 RNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 316
I +L+T P + + +IT +
Sbjct: 96 NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG-------FPL 148
Query: 317 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 376
+ + + V+ N+H +F L S
Sbjct: 149 KHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 208
Query: 377 GVD----SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 432
++ + + + + +G D + M
Sbjct: 209 VLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRM 268
Query: 433 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 492
L I + V + +D +
Sbjct: 269 IIPLES----------SILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVK 314
Query: 493 NEVFVLESHPFDSRVLLSAGHDGLIIIWDI 522
N + L D + ++ DG I + +
Sbjct: 315 NNLTDLRLSA-DRKTVMVRKDDGKIYTFPL 343
Score = 49.9 bits (117), Expect = 1e-06
Identities = 22/247 (8%), Positives = 51/247 (20%), Gaps = 11/247 (4%)
Query: 344 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 403
P I + D + EE+ V ++ +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNG 97
Query: 404 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 463
V ++ + + +A+ +
Sbjct: 98 KFAVVA-------NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKH 150
Query: 464 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 523
T I ++D + ++++ + DS+ L + L D +
Sbjct: 151 GETDGYVMQAIHVYDMEGRKIFAATTENSHDYA--PAFDADSKNLYYLSYRSLDPSPDRV 208
Query: 524 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRE 583
V G+ K P T + + + R
Sbjct: 209 VLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRM 268
Query: 584 LFFHTDY 590
+
Sbjct: 269 IIPLESS 275
Score = 48.7 bits (114), Expect = 3e-06
Identities = 17/194 (8%), Positives = 44/194 (22%), Gaps = 28/194 (14%)
Query: 195 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL-------LATLRGCSG 247
R+ + S + FD + + + L + G
Sbjct: 169 RKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPG 228
Query: 248 EISDIAIDNRNILLAAGTVDKT----IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 303
+ + R++ AG D +++ + I +
Sbjct: 229 SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA 288
Query: 304 FNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLAT 363
Y G + + D+ K + ++ S +
Sbjct: 289 A-YYQGAPEKGVLLKY----DVKTRKVTEVK------------NNLTDLRLSADRKTVMV 331
Query: 364 GSGDHHVRVYKMDG 377
D + + ++
Sbjct: 332 RKDDGKIYTFPLEK 345
Score = 45.6 bits (106), Expect = 3e-05
Identities = 6/94 (6%), Positives = 24/94 (25%), Gaps = 4/94 (4%)
Query: 191 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS 250
+ R + + + + ++ + + K+ ++
Sbjct: 263 PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVKNNLT 318
Query: 251 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL 284
D+ + + D I + L+ +
Sbjct: 319 DLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 61.5 bits (148), Expect = 3e-10
Identities = 42/374 (11%), Positives = 91/374 (24%), Gaps = 23/374 (6%)
Query: 195 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 254
+ V D VT D I L K++ + + +
Sbjct: 11 WKVLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GYAVHISRM 69
Query: 255 DNRNILLAAGTVDKTIRIWNLQT-----LAPISVLVGHQGIITGVNFCPLEVNGFNYLAS 309
L D I + +L +A I + + + + + +A
Sbjct: 70 SASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGY---EDRYTIAG 126
Query: 310 TSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 369
+ + + P + F+
Sbjct: 127 AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 186
Query: 370 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIR 429
V + D + + + W SH R+ + + + + R
Sbjct: 187 VLLVNYK--DIDNLTVTSIGAAPFLADGGWDSSH-RYFMTAANNSNKVAVIDSKDRRLSA 243
Query: 430 LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK 489
L PH ++ + K D + + V L+
Sbjct: 244 LVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYA---WKKVAELQ 300
Query: 490 GHTNEVFVLESHP------FDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEG 543
G +++HP D+ A + ++D+ + + GEG
Sbjct: 301 GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 360
Query: 544 A--LFDGKWSPDGT 555
A + +++ G
Sbjct: 361 AKRVVQPEYNKRGD 374
Score = 42.6 bits (99), Expect = 3e-04
Identities = 21/137 (15%), Positives = 40/137 (29%), Gaps = 7/137 (5%)
Query: 447 NKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR 506
+ K + D + + +T + QI + D + +V+V+ V + R
Sbjct: 18 EDRPKKQLNDLDLPNLFSVTLRDAG-QIALVDGDSKKIVKVIDTG-YAVHISRMSA-SGR 74
Query: 507 VLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQG-EGALFDGKWSPDGTTCALTDSYGH 565
LL G D I + D+ + + I G + +
Sbjct: 75 YLLVIGRDARIDMIDLWAKEP---TKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 131
Query: 566 LLVYGLGGFKRPQNIPR 582
G P+ I
Sbjct: 132 QFAIMDGETLEPKQIVS 148
Score = 36.5 bits (83), Expect = 0.024
Identities = 37/253 (14%), Positives = 71/253 (28%), Gaps = 50/253 (19%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVE---EHSDKVDSIQWSHSHLRFVSGS 410
S G +L D + + + P + E++ E S + ++G+
Sbjct: 69 MSASGRYLLVIGRDARIDMIDLWA-KEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGA 127
Query: 411 RDGTALIWYYKCSQWRFIRLDMNTCLPHTKE---------------------TSDETNKK 449
+ + T+ ET K
Sbjct: 128 YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 187
Query: 450 IKVTM-------------------VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 490
+ V WD+S R+ +TA N + ++ + D+ + L ++
Sbjct: 188 LLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV 247
Query: 491 HTNEVFVLESHPFDSR----VLLSAGHDGLIIIWDILSSKQRGYKW-FHNIVEGQGEGAL 545
++ + S DG I + Y W ++GQG G+L
Sbjct: 248 GKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSL 307
Query: 546 FDGKWSPDGTTCA 558
F K P +
Sbjct: 308 FI-KTHPKSSHLY 319
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 60.0 bits (144), Expect = 6e-10
Identities = 26/295 (8%), Positives = 67/295 (22%), Gaps = 37/295 (12%)
Query: 216 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI------DNRNILLAAGTVDKT 269
G ++++ + + + L +
Sbjct: 38 FSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPA 97
Query: 270 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 329
+ + ++ + V P G + + G K +
Sbjct: 98 ASVTVIDAVSKKML--SEIDTAACVLAYP---AGDDRFTALCESG-----KALTVTLDAN 147
Query: 330 TVFHEPVMFNERIRPGNAHILCSSFSPGGLF---LATGSGDHHVRVYKMDGVDSPLGILE 386
+ M + I +F + + +VR G D P
Sbjct: 148 GKEAKRTMSDAFIDV----DKDPAFVNASRYKGDYLFTTYGGNVRSADFSG-DKPAFGKP 202
Query: 387 VEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW---------YYKCSQWRFIRLDMNTCLP 437
+D + W ++ + + ++ +
Sbjct: 203 WSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSK--- 259
Query: 438 HTKETSDETNKKIK-VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH 491
D +K++ + + D+ + + + + DA G L V K
Sbjct: 260 QRVARWDLAQQKVEPLVSIQVSEDDKPLFYGLTATSDLVVMDARTGALQHVEKQI 314
Score = 45.0 bits (105), Expect = 4e-05
Identities = 20/220 (9%), Positives = 40/220 (18%), Gaps = 17/220 (7%)
Query: 213 DKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRI 272
G+ + + + + A K + +
Sbjct: 83 SADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTV 142
Query: 273 WNLQT---LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLD--IDI 327
G T+ G + + D
Sbjct: 143 TLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGD--YLFTTYGGNVRSADFSGDKPAFG 200
Query: 328 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG------DHHVRVYKMDGVDSP 381
E RPG ++ G D +V+ D
Sbjct: 201 KPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQ 260
Query: 382 LGILEVEEHS--DKVDSIQWSHS--HLRFVSGSRDGTALI 417
+ + SIQ S L + + ++
Sbjct: 261 RVARWDLAQQKVEPLVSIQVSEDDKPLFYGLTATSDLVVM 300
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 53.7 bits (127), Expect = 6e-08
Identities = 22/285 (7%), Positives = 65/285 (22%), Gaps = 18/285 (6%)
Query: 218 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQ 276
+ ++ I + K+ AT+ I + + A + I +
Sbjct: 4 AYIANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTA 62
Query: 277 TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV 336
T I+ + + +G + + + +
Sbjct: 63 TNNVIA----TVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSP 118
Query: 337 MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVE-----EHS 391
+ G + ++ + T + V +
Sbjct: 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFD 178
Query: 392 DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 451
S+ + ++ + + + +++ TNK
Sbjct: 179 SMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITA 238
Query: 452 -------VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK 489
+A + V A++F + + D + +
Sbjct: 239 RIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 52.5 bits (125), Expect = 2e-07
Identities = 33/221 (14%), Positives = 56/221 (25%), Gaps = 22/221 (9%)
Query: 355 SPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT 414
LF T + + +L+ V + S S RDG
Sbjct: 29 DLENLFSVTLRDAGQIALIDGST-YEIKTVLDTGYA---VHISRLSASGRYLFVIGRDGK 84
Query: 415 ALIWYYKCSQWRFIRLDMNT-CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 473
+ D+ E + + T D++ I + Q
Sbjct: 85 VNMI------------DLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ 132
Query: 474 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ---RGY 530
I D + ++ E HP + A H I ++ + + Y
Sbjct: 133 YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY 192
Query: 531 KWFHN--IVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 569
+N E E L DG + + LV
Sbjct: 193 TDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVV 233
Score = 40.9 bits (95), Expect = 0.001
Identities = 27/214 (12%), Positives = 57/214 (26%), Gaps = 12/214 (5%)
Query: 354 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV---EEHSDKVDSIQWSH-SHLRFVSG 409
S G +L D V + + + P + E+ E S
Sbjct: 69 LSASGRYLFVIGRDGKVNMIDLW-MKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGA 127
Query: 410 SRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN 469
+I + + + I+ +E E +V + I +
Sbjct: 128 YWPPQYVIMDGETLEPKKIQSTRGMT-YDEQEYHPEP----RVAAILASHYRPEFIVNVK 182
Query: 470 FNFQIKIWDAFNGDLVQVLKGHTNEV-FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 528
+I + D + + ++ + + +A +++ D K
Sbjct: 183 ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 242
Query: 529 GYKWFHNIVEGQGEGALF-DGKWSPDGTTCALTD 561
+ G GA F + P T + D
Sbjct: 243 AIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD 276
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 50.2 bits (118), Expect = 1e-06
Identities = 39/314 (12%), Positives = 76/314 (24%), Gaps = 23/314 (7%)
Query: 257 RNILLAAGTVDKTIRIWNLQTLAPISVL--VGHQGIITGVNFCPLEVNGFNYLASTSTDG 314
+ + A + I +WNL +++ V G + + P + +
Sbjct: 3 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP---DKRYLYVGVRPEF 59
Query: 315 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 374
+ + I+ + HI S G F+ GS +
Sbjct: 60 RVLAY------RIAPDDGALTFAAESALPGSLTHI---STDHQGQFVFVGSYNAGNVSVT 110
Query: 375 MDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM-- 432
P+G+++V E D S S + + + + + D
Sbjct: 111 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAE 170
Query: 433 -NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH 491
T + V S V + + I+ + +
Sbjct: 171 VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDM--MPENFSD 228
Query: 492 TNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWS 551
T + P + LI ++ + K E Q G
Sbjct: 229 TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNV----D 284
Query: 552 PDGTTCALTDSYGH 565
G H
Sbjct: 285 HSGKYLIAAGQKSH 298
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 47.9 bits (112), Expect = 5e-06
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 202 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNI 259
H + L + + + A+ G+ LA EI I + D + +
Sbjct: 256 YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPL 314
Query: 260 LLAAGTVDKTIRIWNLQTLAPISVLVGH 287
L A T DKT+ I + ++ + +
Sbjct: 315 LYALSTGDKTLYIHDAESGEELRSVNQL 342
Score = 36.7 bits (83), Expect = 0.018
Identities = 17/141 (12%), Positives = 34/141 (24%), Gaps = 15/141 (10%)
Query: 244 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT--LAPISVLVGHQGIITGVNFCPLEV 301
I+ A + L T I +L + + + +
Sbjct: 192 EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWR---- 247
Query: 302 NGFNYLASTSTDGCIGFWKYKLDIDI-----SKTVFHEPVMFNERIR--PGNAHILCSSF 354
G + + + S+ V ER+ I +
Sbjct: 248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINV 307
Query: 355 SPGG--LFLATGSGDHHVRVY 373
S L A +GD + ++
Sbjct: 308 SQDEKPLLYALSTGDKTLYIH 328
Score = 34.4 bits (77), Expect = 0.10
Identities = 5/58 (8%), Positives = 16/58 (27%), Gaps = 2/58 (3%)
Query: 201 LGHLSAVFCVLFDKLGE--VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDN 256
+ + + + + D + + A G+ L ++ I +
Sbjct: 296 FEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 353
Score = 33.6 bits (75), Expect = 0.16
Identities = 21/203 (10%), Positives = 38/203 (18%), Gaps = 9/203 (4%)
Query: 224 DDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 283
+ + L + + + T
Sbjct: 127 PAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT 186
Query: 284 LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIR 343
V H +N L + G I
Sbjct: 187 EVFHPEDEFLINHPAYSQKA-GRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADG 245
Query: 344 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-----VDSPLG-ILEVEEHSDKVDSI 397
++ + +K +D+ G L E ++DSI
Sbjct: 246 WRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSI 305
Query: 398 QWSH--SHLRFVSGSRDGTALIW 418
S L + + D T I
Sbjct: 306 NVSQDEKPLLYALSTGDKTLYIH 328
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 43.4 bits (101), Expect = 1e-04
Identities = 25/261 (9%), Positives = 53/261 (20%), Gaps = 37/261 (14%)
Query: 352 SSFSPGGLFLATGSGDHHVRVYKMDGV-DSPLGILEVEEHSDKVDSIQWSHSH------- 403
+ S + LG + HS
Sbjct: 28 GAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLG----AFLSLAVAGHSGSDFALAS 83
Query: 404 ---LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK---ETSDETNKKIKVTMVAW 457
R G R ++ D T LP + + +V ++
Sbjct: 84 TSFARSAKGKRTDYVEVF------------DPVTFLPIADIELPDAPRFSVGPRVHIIGN 131
Query: 458 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 517
AS ++ + + Q+ K + HP + +
Sbjct: 132 CASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI----HPGAAATHYLGSCPASL 187
Query: 518 IIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRP 577
D+ ++ Q + + + G + +L +
Sbjct: 188 AASDLAAAPAAAGIVGAQCTGAQN-CSSQAAQANYPGM--LVWAVASSILQGDIPAAGAT 244
Query: 578 QNIPRELFFHTDYRTLNRPNG 598
+ R G
Sbjct: 245 MKAAIDGNESGRKADNFRSAG 265
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 37.3 bits (85), Expect = 0.009
Identities = 15/79 (18%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 208 FCVLFDKLGEVIVT-GADDLLIKLWRARDGKLLATL--RGCSGEISDIAIDNRNILLAAG 264
V + GE+++ ++ + ++ +DG+L++ L + + D+A+ + ++ A
Sbjct: 203 IGVGINSNGEILIADNHNNFNLTIF-TQDGQLISALESKVKHAQCFDVALMDDGSVVLAS 261
Query: 265 TVDKTIRIWNLQTLAPISV 283
D + I+ LAP+ +
Sbjct: 262 K-DYRLYIYRYVQLAPVGM 279
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 37.5 bits (86), Expect = 0.011
Identities = 25/219 (11%), Positives = 61/219 (27%), Gaps = 24/219 (10%)
Query: 325 IDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFL-ATGSGDHHVRVYKMD--GVDSP 381
+S+T E + N N I F P +L + + + ++ G
Sbjct: 124 FSVSETGKLEKNVQNYE-YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL 182
Query: 382 LGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK 440
+G ++ + D + + + I Y + + + P
Sbjct: 183 VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR--ICEYVIDPATHMPVYTHHSFPLIP 240
Query: 441 ETSDETNKK-----IKVTMVAWDASDRWVITA---INFNFQIKIWDAFNGDLVQVLK-GH 491
+ + + + + A S +++ + F Q I D + K
Sbjct: 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF 300
Query: 492 TNEVFVLESHPFD--------SRVLLSAGHDGLIIIWDI 522
+ H + ++ +G + I+
Sbjct: 301 LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339
>d1ofcx3 a.187.1.1 (X:697-798) HAND domain of the nucleosome
remodeling ATPase ISWI {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 102
Score = 34.4 bits (79), Expect = 0.014
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 1243 GRKAPESEDEVEGEEEEESNDQSEEEEVEENSEEEEEE 1280
G K P++ + + + +Q + +E E +EEE +E
Sbjct: 55 GYKVPKNTELGSDATKVQREEQRKIDEAEPLTEEEIQE 92
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)
{Burkholderia glumae [TaxId: 337]}
Length = 280
Score = 29.6 bits (66), Expect = 2.6
Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 8/163 (4%)
Query: 1242 RGRKAPESEDEVEGEEEEESNDQSEEEEVEENSEEEEEEEAVPRRRPVRRANVAKVKRAV 1301
R E + G+E+ E + ++ E++A R A + +RA
Sbjct: 117 ADRTLGEWAEPFFGDEQRRQRHDLERIRIANDTTLSPEQKA--ARLAALDAQLTPDERAQ 174
Query: 1302 PPAPDTSTSRLRSVRQNGRAKRTNGRQSSSLLMTCSGDSDSEDNSQEEEQYGSRRARRTR 1361
A + + +A T + + + T E ++ + A +TR
Sbjct: 175 QAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTL----GPEAAARAAQMQQDDEAWQTR 230
Query: 1362 TKGQSYAVHSSETETESEEEESQAAQVSFSRRGRMRKPTAKLR 1404
Q+YA + + + A+++ R+ P +R
Sbjct: 231 Y--QAYAAERDRIAAQGLAPQDRDARIAQLRQQTFTAPGEAIR 271
>d1qkla_ a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 9606]}
Length = 127
Score = 28.2 bits (63), Expect = 2.8
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 1249 SEDEVEGEEEEESNDQSEEEEVEENSEEEEEEEAV 1283
S++E + ++ + + +E + + EEE +E V
Sbjct: 2 SDNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENV 36
>d1o8ra_ d.234.1.1 (A:) Proguanylin {Human (Homo sapiens) [TaxId:
9606]}
Length = 94
Score = 27.6 bits (61), Expect = 3.3
Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 15 EAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPKICQR 66
E+ K L DL E + + + + + S+PN P +C+
Sbjct: 13 ESVKKLKDLQEPQEPRVGKLRNFAPIPGEPVVPILCSNPNFPEELKP-LCKE 63
>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 255
Score = 28.9 bits (63), Expect = 4.2
Identities = 19/125 (15%), Positives = 36/125 (28%), Gaps = 12/125 (9%)
Query: 245 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGF 304
C G + + +L AA + R+ S G + + L++
Sbjct: 26 CGGSL----LSGDWVLTAAHCFPERNRVL--------SRWRVFAGAVAQASPHGLQLGVQ 73
Query: 305 NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 364
+ + DI+ P+ E I+P + G + TG
Sbjct: 74 AVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTG 133
Query: 365 SGDHH 369
G+
Sbjct: 134 WGNTQ 138
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 28.7 bits (62), Expect = 4.6
Identities = 22/220 (10%), Positives = 57/220 (25%), Gaps = 21/220 (9%)
Query: 345 GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL 404
++ ++SP G LA + + + + V + H
Sbjct: 37 SPQPLMSPAWSPDGSKLAYVTFESGRSALVI-----------QTLANGAVRQVASFPRHN 85
Query: 405 RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWV 464
+ S DG+ L + + + + + D+ +
Sbjct: 86 GAPAFSPDGSKLAFALSKTGSLNLY--VMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAF 143
Query: 465 ITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 524
+ Q+ + G ++ + S +++ + + G I
Sbjct: 144 TSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDL 202
Query: 525 SKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYG 564
+ ++ +P+GT + S G
Sbjct: 203 ATGGVQVLSSTFLD-------ETPSLAPNGTMVIYSSSQG 235
>d1ihka_ b.42.1.1 (A:) Fibroblast growth factor 9, FGF9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 157
Score = 27.9 bits (62), Expect = 6.1
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 856 RVRRHTKVKPIQVS---LPKQLIPEEVPDIYKP 885
R T+ K Q LP+ + P++VP++YK
Sbjct: 120 TPREGTRTKRHQKFTHFLPRPVDPDKVPELYKD 152
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 27.2 bits (60), Expect = 6.9
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 1231 KQSYNKFSGRGRGRKAPESEDEVEGEEEEESNDQSEE--EEVEENSEEEEEEEAV 1283
K+ + R+ S E G EEE Q +E + + E ++E +
Sbjct: 80 KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWL 134
>d1dj0a_ d.265.1.1 (A:) Pseudouridine synthase I TruA {Escherichia
coli [TaxId: 562]}
Length = 264
Score = 28.0 bits (61), Expect = 7.1
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
Query: 564 GHLLVYGLGGFKRPQNIPRELFFHTDYRTLNR----PNGLF--EPTYDEVTNLPPHLMPP 617
G L+ G +P++ EL D RTL GL+ Y + +LP M P
Sbjct: 203 GSLMEVGAH--NQPESWIAELLAAKD-RTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGP 259
Query: 618 PFLVD 622
FL D
Sbjct: 260 LFLAD 264
>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904
{Enterococcus faecalis [TaxId: 1351]}
Length = 183
Score = 27.3 bits (59), Expect = 9.7
Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 1/118 (0%)
Query: 379 DSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPH 438
E+ + ++ SH+HL + Y + + I +N
Sbjct: 15 RLGYEYHGAEDKDYQHTAVFLSHAHLDHSRMINYLDPAVPLYTLKETKMILNSLNRKGDF 74
Query: 439 TKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVF 496
+ K M+ + +D + I+ DA+ + + +
Sbjct: 75 LIPS-PFEEKNFTREMIGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITY 131
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.132 0.390
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 5,306,485
Number of extensions: 257134
Number of successful extensions: 978
Number of sequences better than 10.0: 1
Number of HSP's gapped: 693
Number of HSP's successfully gapped: 110
Length of query: 1407
Length of database: 2,407,596
Length adjustment: 97
Effective length of query: 1310
Effective length of database: 1,075,786
Effective search space: 1409279660
Effective search space used: 1409279660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.5 bits)