Your job contains 1 sequence.
>psy6523
MLELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEG
AVANRTDACFIRVIGSELVQKYVGEGARMIDAIGGARFDDGAGGDNEVQRTMLELINQPE
KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGERVLMEGC
NNEGCGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSK
RQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFK
PTVSPVCLPQLGEKFTQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAK
LTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELT
GIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDI
GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL
PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS
EKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDR
NKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6523
(713 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 562 3.5e-84 2
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 562 4.5e-84 2
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 562 4.5e-84 2
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 562 4.5e-84 2
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 562 4.5e-84 2
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 562 4.5e-84 2
RGD|3428 - symbol:Psmc2 "proteasome (prosome, macropain) ... 562 4.5e-84 2
UNIPROTKB|Q63347 - symbol:Psmc2 "26S protease regulatory ... 562 4.5e-84 2
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 563 5.7e-84 2
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 562 5.7e-84 2
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 562 9.3e-84 2
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 562 9.3e-84 2
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 556 1.9e-83 2
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 562 6.5e-83 2
UNIPROTKB|B7Z5E2 - symbol:PSMC2 "cDNA FLJ52353, highly si... 562 6.5e-83 2
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 548 1.7e-82 2
WB|WBGene00004501 - symbol:rpt-1 species:6239 "Caenorhabd... 532 4.1e-79 2
UNIPROTKB|Q18787 - symbol:rpt-1 "26S protease regulatory ... 532 4.1e-79 2
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 530 2.8e-78 2
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 524 5.2e-77 2
CGD|CAL0005689 - symbol:RPT1 species:5476 "Candida albica... 499 2.3e-74 2
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 501 3.7e-74 2
POMBASE|SPBC16C6.07c - symbol:rpt1 "19S proteasome regula... 494 1.6e-73 2
GENEDB_PFALCIPARUM|PF13_0063 - symbol:PF13_0063 "26S prot... 487 1.7e-72 2
UNIPROTKB|Q8IEK3 - symbol:PF13_0063 "26S proteasome regul... 487 1.7e-72 2
ASPGD|ASPL0000034636 - symbol:AN2917 species:162425 "Emer... 480 3.5e-72 2
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 347 3.1e-49 2
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 347 3.1e-49 2
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 338 9.0e-49 2
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 337 1.2e-48 2
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 329 2.6e-48 2
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 326 2.7e-48 2
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 321 2.8e-48 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 334 5.1e-48 2
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 336 1.0e-47 2
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 318 1.3e-47 2
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 318 1.3e-47 2
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 318 1.3e-47 2
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 318 1.3e-47 2
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 318 1.3e-47 2
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 318 1.3e-47 2
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 318 1.3e-47 2
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 318 1.3e-47 2
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 318 1.3e-47 2
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 318 1.3e-47 2
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 354 1.7e-47 2
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 354 1.7e-47 2
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 322 2.0e-47 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 307 3.7e-47 2
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 309 5.9e-47 2
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 320 1.4e-46 2
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 325 1.7e-46 2
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 310 4.0e-46 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 296 5.8e-46 2
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 320 5.9e-46 2
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 320 5.9e-46 2
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 320 5.9e-46 2
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 320 5.9e-46 2
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 320 5.9e-46 2
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 320 5.9e-46 2
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 320 5.9e-46 2
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 320 5.9e-46 2
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 320 5.9e-46 2
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 320 5.9e-46 2
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 319 6.0e-46 2
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 319 7.6e-46 2
FB|FBgn0034661 - symbol:CG4386 species:7227 "Drosophila m... 481 1.1e-45 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 302 1.1e-45 2
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 300 1.5e-45 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 309 2.0e-45 2
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 313 3.4e-45 2
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 317 1.2e-44 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 307 1.6e-44 2
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 298 7.6e-44 2
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 298 7.6e-44 2
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 315 1.3e-43 2
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 301 1.4e-43 2
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 301 1.4e-43 2
UNIPROTKB|F1P3L9 - symbol:PSMC3 "Uncharacterized protein"... 294 2.0e-43 2
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 310 2.4e-43 2
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 308 5.0e-43 2
UNIPROTKB|F1NDQ1 - symbol:PSMC3 "Uncharacterized protein"... 294 5.2e-43 2
UNIPROTKB|E9PM69 - symbol:PSMC3 "26S protease regulatory ... 294 5.2e-43 2
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 297 5.3e-43 2
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 297 5.6e-43 2
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 296 7.9e-43 2
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 296 7.9e-43 2
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 296 7.9e-43 2
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 296 7.9e-43 2
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 296 7.9e-43 2
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 296 7.9e-43 2
FB|FBgn0042098 - symbol:CG18735 species:7227 "Drosophila ... 456 8.3e-43 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 295 1.1e-42 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 297 1.5e-42 2
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 300 1.5e-42 2
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 300 3.8e-42 2
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 298 7.9e-42 2
UNIPROTKB|O42586 - symbol:psmc3-b "26S protease regulator... 291 8.6e-41 2
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 289 1.5e-40 2
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 280 4.6e-40 2
WARNING: Descriptions of 1979 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 562 (202.9 bits), Expect = 3.5e-84, Sum P(2) = 3.5e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 284 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 340
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 341 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 400
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 401 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 429
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 116/171 (67%), Positives = 138/171 (80%)
Query: 546 RTHIFKIHARSMS-VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDF 604
+T+ ++R + VE DI+ +LL ++ TG I+ ++ G+ A A +A++K
Sbjct: 33 KTYGQSTYSRQIKQVEDDIQ-QLLKKI-NELTG--IKE--SDTGL-APPALWDLAADKQT 85
Query: 605 LEAVN--KVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNK 662
L++ +VARCTKIINADSE+PKYIINVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNK
Sbjct: 86 LQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNK 145
Query: 663 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
YQIHIPLPPKIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH
Sbjct: 146 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLH 196
Score = 300 (110.7 bits), Expect = 3.5e-84, Sum P(2) = 3.5e-84
Identities = 57/81 (70%), Positives = 68/81 (83%)
Query: 372 EGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAP 431
E K+ +LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLAP
Sbjct: 14 EEEKEDKHSSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAP 73
Query: 432 PALWDLTADKQTLQNEQPLQI 452
PALWDL ADKQTLQ+EQPLQ+
Sbjct: 74 PALWDLAADKQTLQSEQPLQV 94
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 184 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 243
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 244 LVQKYVGEGARM 255
Score = 271 (100.5 bits), Expect = 9.0e-21, P = 9.0e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 98 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 154
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 155 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 200
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 221 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 275
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 276 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 308
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 219 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 252
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 562 (202.9 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 327 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 383
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 384 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 443
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 444 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 472
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 128/212 (60%), Positives = 152/212 (71%)
Query: 511 KVLMATNRPDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDI 563
+ L A PD L A R + D K + + L EG + K + +S VE DI
Sbjct: 36 EALGAPKMPDYLG-ADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDI 94
Query: 564 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINAD 621
+ +LL ++ TG I+ ++ G+ A A +A++K L++ +VARCTKIINAD
Sbjct: 95 Q-QLLKKI-NELTG--IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIINAD 147
Query: 622 SENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQ 681
SE+PKYIINVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQ
Sbjct: 148 SEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQ 207
Query: 682 VEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
VEEKPDVTYSD+GGCKEQIEKLREVVETPLLH
Sbjct: 208 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLH 239
Score = 299 (110.3 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 372 EGGKDSCQV-TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLA 430
E KD + LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLA
Sbjct: 56 EDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 115
Query: 431 PPALWDLTADKQTLQNEQPLQI 452
PPALWDL ADKQTLQ+EQPLQ+
Sbjct: 116 PPALWDLAADKQTLQSEQPLQV 137
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 227 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 286
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 287 LVQKYVGEGARM 298
Score = 271 (100.5 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 141 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 197
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 198 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 243
Score = 167 (63.8 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 264 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 318
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 319 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 351
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 262 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 295
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 562 (202.9 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 126/204 (61%), Positives = 149/204 (73%)
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDIRFELLARL 571
PD L A R + D K + + L EG + K + +S VE DI+ +LL ++
Sbjct: 2 PDYLG-ADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQ-QLLKKI 59
Query: 572 CPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYII 629
TG I+ ++ G+ A A +A++K L++ +VARCTKIINADSE+PKYII
Sbjct: 60 -NELTG--IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYII 113
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
NVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT
Sbjct: 114 NVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 173
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
YSD+GGCKEQIEKLREVVETPLLH
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLH 197
Score = 299 (110.3 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 372 EGGKDSCQV-TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLA 430
E KD + LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLA
Sbjct: 14 EDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 73
Query: 431 PPALWDLTADKQTLQNEQPLQI 452
PPALWDL ADKQTLQ+EQPLQ+
Sbjct: 74 PPALWDLAADKQTLQSEQPLQV 95
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 271 (100.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 253
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 562 (202.9 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 126/204 (61%), Positives = 149/204 (73%)
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDIRFELLARL 571
PD L A R + D K + + L EG + K + +S VE DI+ +LL ++
Sbjct: 2 PDYLG-ADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQ-QLLKKI 59
Query: 572 CPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYII 629
TG I+ ++ G+ A A +A++K L++ +VARCTKIINADSE+PKYII
Sbjct: 60 -NELTG--IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYII 113
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
NVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT
Sbjct: 114 NVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 173
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
YSD+GGCKEQIEKLREVVETPLLH
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLH 197
Score = 299 (110.3 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 372 EGGKDSCQV-TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLA 430
E KD + LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLA
Sbjct: 14 EDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 73
Query: 431 PPALWDLTADKQTLQNEQPLQI 452
PPALWDL ADKQTLQ+EQPLQ+
Sbjct: 74 PPALWDLAADKQTLQSEQPLQV 95
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 271 (100.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 253
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 562 (202.9 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 126/204 (61%), Positives = 149/204 (73%)
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDIRFELLARL 571
PD L A R + D K + + L EG + K + +S VE DI+ +LL ++
Sbjct: 2 PDYLG-ADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQ-QLLKKI 59
Query: 572 CPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYII 629
TG I+ ++ G+ A A +A++K L++ +VARCTKIINADSE+PKYII
Sbjct: 60 -NELTG--IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYII 113
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
NVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT
Sbjct: 114 NVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 173
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
YSD+GGCKEQIEKLREVVETPLLH
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLH 197
Score = 299 (110.3 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 372 EGGKDSCQV-TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLA 430
E KD + LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLA
Sbjct: 14 EDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 73
Query: 431 PPALWDLTADKQTLQNEQPLQI 452
PPALWDL ADKQTLQ+EQPLQ+
Sbjct: 74 PPALWDLAADKQTLQSEQPLQV 95
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 271 (100.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 253
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 562 (202.9 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 126/204 (61%), Positives = 149/204 (73%)
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDIRFELLARL 571
PD L A R + D K + + L EG + K + +S VE DI+ +LL ++
Sbjct: 2 PDYLG-ADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQ-QLLKKI 59
Query: 572 CPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYII 629
TG I+ ++ G+ A A +A++K L++ +VARCTKIINADSE+PKYII
Sbjct: 60 -NELTG--IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYII 113
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
NVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT
Sbjct: 114 NVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 173
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
YSD+GGCKEQIEKLREVVETPLLH
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLH 197
Score = 299 (110.3 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 372 EGGKDSCQV-TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLA 430
E KD + LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLA
Sbjct: 14 EDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 73
Query: 431 PPALWDLTADKQTLQNEQPLQI 452
PPALWDL ADKQTLQ+EQPLQ+
Sbjct: 74 PPALWDLAADKQTLQSEQPLQV 95
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 271 (100.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 253
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 562 (202.9 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 126/204 (61%), Positives = 149/204 (73%)
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDIRFELLARL 571
PD L A R + D K + + L EG + K + +S VE DI+ +LL ++
Sbjct: 2 PDYLG-ADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQ-QLLKKI 59
Query: 572 CPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYII 629
TG I+ ++ G+ A A +A++K L++ +VARCTKIINADSE+PKYII
Sbjct: 60 -NELTG--IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYII 113
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
NVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT
Sbjct: 114 NVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 173
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
YSD+GGCKEQIEKLREVVETPLLH
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLH 197
Score = 299 (110.3 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 372 EGGKDSCQV-TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLA 430
E KD + LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLA
Sbjct: 14 EDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 73
Query: 431 PPALWDLTADKQTLQNEQPLQI 452
PPALWDL ADKQTLQ+EQPLQ+
Sbjct: 74 PPALWDLAADKQTLQSEQPLQV 95
Score = 281 (104.0 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 57/72 (79%), Positives = 61/72 (84%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFI VIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 271 (100.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 160 (61.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/94 (48%), Positives = 51/94 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFI VIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIPVIGSEL-VQKYVGEG 253
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 562 (202.9 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 126/204 (61%), Positives = 149/204 (73%)
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDIRFELLARL 571
PD L A R + D K + + L EG + K + +S VE DI+ +LL ++
Sbjct: 2 PDYLG-ADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQ-QLLKKI 59
Query: 572 CPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYII 629
TG I+ ++ G+ A A +A++K L++ +VARCTKIINADSE+PKYII
Sbjct: 60 -NELTG--IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYII 113
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
NVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT
Sbjct: 114 NVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 173
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
YSD+GGCKEQIEKLREVVETPLLH
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLH 197
Score = 299 (110.3 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 372 EGGKDSCQV-TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLA 430
E KD + LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLA
Sbjct: 14 EDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 73
Query: 431 PPALWDLTADKQTLQNEQPLQI 452
PPALWDL ADKQTLQ+EQPLQ+
Sbjct: 74 PPALWDLAADKQTLQSEQPLQV 95
Score = 281 (104.0 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 57/72 (79%), Positives = 61/72 (84%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFI VIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 271 (100.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 160 (61.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/94 (48%), Positives = 51/94 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFI VIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIPVIGSEL-VQKYVGEG 253
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 563 (203.2 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 115/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
KVA+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KVATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 125/204 (61%), Positives = 149/204 (73%)
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDIRFELLARL 571
PD L A R + + K + + L EG + K + +S VE DI+ +LL ++
Sbjct: 2 PDYLG-ADQRKTKEEEKEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQ-QLLKKI 59
Query: 572 CPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYII 629
TG I+ ++ G+ A A +A++K L++ +VARCTKIINADSE+PKYII
Sbjct: 60 -NELTG--IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYII 113
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
NVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT
Sbjct: 114 NVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 173
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
YSD+GGCKEQIEKLREVVETPLLH
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLH 197
Score = 297 (109.6 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 55/72 (76%), Positives = 65/72 (90%)
Query: 381 TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTAD 440
+LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLAPPALWDL AD
Sbjct: 24 SLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAAD 83
Query: 441 KQTLQNEQPLQI 452
KQTLQ+EQPLQ+
Sbjct: 84 KQTLQSEQPLQV 95
Score = 288 (106.4 bits), Expect = 5.1e-83, Sum P(2) = 5.1e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 271 (100.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 253
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 562 (202.9 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 116/171 (67%), Positives = 138/171 (80%)
Query: 546 RTHIFKIHARSMS-VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDF 604
+T+ ++R + VE DI+ +LL ++ TG I+ ++ G+ A A +A++K
Sbjct: 34 KTYGQSTYSRQIKQVEDDIQ-QLLKKI-NELTG--IKE--SDTGL-APPALWDLAADKQT 86
Query: 605 LEAVN--KVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNK 662
L++ +VARCTKIINADSE+PKYIINVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNK
Sbjct: 87 LQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNK 146
Query: 663 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
YQIHIPLPPKIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLH 197
Score = 298 (110.0 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 372 EGGKDSCQV-TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLA 430
E KD + LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLA
Sbjct: 14 EEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 73
Query: 431 PPALWDLTADKQTLQNEQPLQI 452
PPALWDL ADKQTLQ+EQPLQ+
Sbjct: 74 PPALWDLAADKQTLQSEQPLQV 95
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 271 (100.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 253
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 562 (202.9 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 276 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 332
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 333 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 392
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 393 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 421
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 123/196 (62%), Positives = 145/196 (73%)
Query: 526 LMRPGRLDRKVEFGLPDLEGRTHIFKIHARSM------SVERDIRFELLARLCPNSTGAE 579
+ RP R R+ D EG + K + +S VE DI+ +LL ++ TG
Sbjct: 1 MARPRRRRRRTNIPALD-EGDIALLKTYGQSTYSRQIKQVEDDIQ-QLLKKI-NELTG-- 55
Query: 580 IRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYIINVKQFAKF 637
I+ ++ G+ A A +A++K L++ +VARCTKIINADSE+PKYIINVKQFAKF
Sbjct: 56 IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKF 112
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
VVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSD+GGCK
Sbjct: 113 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 172
Query: 698 EQIEKLREVVETPLLH 713
EQIEKLREVVETPLLH
Sbjct: 173 EQIEKLREVVETPLLH 188
Score = 296 (109.3 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLAPPALWDL ADK
Sbjct: 16 LDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADK 75
Query: 442 QTLQNEQPLQI 452
QTLQ+EQPLQ+
Sbjct: 76 QTLQSEQPLQV 86
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 176 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 235
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 236 LVQKYVGEGARM 247
Score = 271 (100.5 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 90 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 146
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 147 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 192
Score = 167 (63.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 213 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 267
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 268 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 300
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 211 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 244
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 562 (202.9 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 116/171 (67%), Positives = 138/171 (80%)
Query: 546 RTHIFKIHARSMS-VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDF 604
+T+ ++R + VE DI+ +LL ++ TG I+ ++ G+ A A +A++K
Sbjct: 34 KTYGQSTYSRQIKQVEDDIQ-QLLKKI-NELTG--IKE--SDTGL-APPALWDLAADKQT 86
Query: 605 LEAVN--KVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNK 662
L++ +VARCTKIINADSE+PKYIINVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNK
Sbjct: 87 LQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNK 146
Query: 663 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
YQIHIPLPPKIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLH 197
Score = 296 (109.3 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLAPPALWDL ADK
Sbjct: 25 LDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADK 84
Query: 442 QTLQNEQPLQI 452
QTLQ+EQPLQ+
Sbjct: 85 QTLQSEQPLQV 95
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 271 (100.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 253
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 556 (200.8 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 113/152 (74%), Positives = 127/152 (83%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHI KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 430
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 125/204 (61%), Positives = 148/204 (72%)
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDIRFELLARL 571
PD L A R + D K + + L EG + K + +S VE DI+ +LL ++
Sbjct: 2 PDYLG-ADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQ-QLLKKI 59
Query: 572 CPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYII 629
TG I+ ++ G+ A A +A++K L++ +VARCTKII ADSE+PKYII
Sbjct: 60 -NELTG--IKE--SDTGL-APPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYII 113
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
NVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT
Sbjct: 114 NVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 173
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
YSD+GGCKEQIEKLREVVETPLLH
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLH 197
Score = 299 (110.3 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 372 EGGKDSCQV-TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLA 430
E KD + LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLA
Sbjct: 14 EDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 73
Query: 431 PPALWDLTADKQTLQNEQPLQI 452
PPALWDL ADKQTLQ+EQPLQ+
Sbjct: 74 PPALWDLAADKQTLQSEQPLQV 95
Score = 288 (106.4 bits), Expect = 2.8e-82, Sum P(2) = 2.8e-82
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 185 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 270 (100.1 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIITADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 201
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 253
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 562 (202.9 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 286 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 342
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 343 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 402
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 403 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 431
Score = 513 (185.6 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 97/101 (96%), Positives = 100/101 (99%)
Query: 613 RCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPK 672
RCTKIINADSE+PKYIINVKQFAKFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPK
Sbjct: 98 RCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPK 157
Query: 673 IDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
IDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH
Sbjct: 158 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLH 198
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 186 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 245
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 246 LVQKYVGEGARM 257
Score = 271 (100.5 bits), Expect = 9.2e-21, P = 9.2e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A +D + +I + + +AP D+ + + QIHIPLPP
Sbjct: 100 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT---DIEEGMRVGVDRNKYQIHIPLPP 156
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 157 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 202
Score = 247 (92.0 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 46/67 (68%), Positives = 56/67 (83%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
LDE DIALLK+YGQ Y++ IK VEDDIQ ++K++NELTGIKESDTGLAPPALWDL +
Sbjct: 26 LDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAYEN 85
Query: 442 QTLQNEQ 448
Q L++ Q
Sbjct: 86 QELRSNQ 92
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 223 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 277
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 278 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 310
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 254
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 562 (202.9 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 114/152 (75%), Positives = 128/152 (84%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK+
Sbjct: 148 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 204
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 205 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 264
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
K+A+EKDFLEAVNKV + +A P+Y+
Sbjct: 265 KIATEKDFLEAVNKVIKSYAKFSA---TPRYM 293
Score = 316 (116.3 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 59/60 (98%), Positives = 60/60 (100%)
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH
Sbjct: 1 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLH 60
Score = 288 (106.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 58/72 (80%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 48 EKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 107
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 108 LVQKYVGEGARM 119
Score = 266 (98.7 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 50/54 (92%), Positives = 52/54 (96%)
Query: 451 QIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
QIHIPLPPKIDPTVTMMQVEEKPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 11 QIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERF 64
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 85 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 139
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 140 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 172
Score = 43 (20.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 83 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 116
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 548 (198.0 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 112/152 (73%), Positives = 127/152 (83%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV
Sbjct: 285 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 341
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EFGLPD +GR+HIFKIHARSMSVERDIRF+LLARLCPNSTGAEIRSVCTEAGMFAIRARR
Sbjct: 342 EFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYI 628
KVA+EKDFLEAV KV + +A P+Y+
Sbjct: 402 KVATEKDFLEAVKKVIKSYAKFSA---TPRYM 430
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 124/204 (60%), Positives = 145/204 (71%)
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDL-EGRTHIFKIHARSM------SVERDIRFELLARL 571
PD L R + D K + + L EG + K + +S S+E DI + +
Sbjct: 2 PDYLGDD-QRKVKHDEKEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDI--QKAVKQ 58
Query: 572 CPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFL--EAVNKVARCTKIINADSENPKYII 629
TG I+ ++ G+ A A +A++K L E +VARCTKIINADS++PKYII
Sbjct: 59 VNELTG--IKE--SDTGL-APPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYII 113
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVE+KPDVT
Sbjct: 114 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVT 173
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
YSD+GGCKEQIEKLREVVETPLLH
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLH 197
Score = 298 (110.0 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 56/72 (77%), Positives = 64/72 (88%)
Query: 381 TLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTAD 440
+LDE DI LLK+YGQ QY KSIK++E+DIQ +K+VNELTGIKESDTGLAPPALWDL AD
Sbjct: 24 SLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELTGIKESDTGLAPPALWDLAAD 83
Query: 441 KQTLQNEQPLQI 452
KQ LQNEQPLQ+
Sbjct: 84 KQILQNEQPLQV 95
Score = 291 (107.5 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 59/72 (81%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 185 EKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 245 LVQKYVGEGARM 256
Score = 272 (100.8 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 399 TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIPLPP 458
TK I A DD + +I + + +AP D+ + + QIHIPLPP
Sbjct: 99 TKIINADSDDPKYIINVKQFAKFVVDLADSVAPT---DIEEGMRVGVDRNKYQIHIPLPP 155
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
KIDPTVTMMQVE+KPDVTYSD+GGCKEQIEKLREVVETPLLH + F
Sbjct: 156 KIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKF 201
Score = 166 (63.5 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 46/94 (48%), Positives = 50/94 (53%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R F + + E
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE--LFEMARSKKACLIFFDE--- 276
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 277 -IDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Score = 43 (20.2 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 253
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 532 (192.3 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 108/148 (72%), Positives = 120/148 (81%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E + E++ LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF L
Sbjct: 292 GGDNEVQRTMLELIN----QLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFAL 347
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PDL GR HI KIHA+ MSVERDIR++LLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA+
Sbjct: 348 PDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAT 407
Query: 601 EKDFLEAVNKVARCTKIINADSENPKYI 628
EKDFLEA+NKV + +A P+Y+
Sbjct: 408 EKDFLEAINKVVKGYAKFSA---TPRYL 432
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 112/201 (55%), Positives = 137/201 (68%)
Query: 519 PDTLDPALMRPGRLDRKVE---FGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNS 575
PD L + + + D K E F D EG + K + + E+ + C
Sbjct: 2 PDHLGDDMRKTKKDDTKEEEKNFQALD-EGDIAVLKRYGQGPYAEQLKTLDADIENCLKK 60
Query: 576 TGAEIRSVC-TEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYIINVK 632
E+ V ++ G+ A A +A++K ++ +VARCTKII +D +P+Y+INVK
Sbjct: 61 VN-ELSGVKESDTGL-APPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVK 118
Query: 633 QFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSD 692
QFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIH+PLP KIDPTVTMMQVEEKPDVTYSD
Sbjct: 119 QFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSD 178
Query: 693 IGGCKEQIEKLREVVETPLLH 713
+GGCK+QIEKLREVVETPLLH
Sbjct: 179 VGGCKDQIEKLREVVETPLLH 199
Score = 282 (104.3 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE++VNLGIEPPKGVLL+GPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 187 EKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSE 246
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 247 LVQKYVGEGARM 258
Score = 260 (96.6 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 46/71 (64%), Positives = 59/71 (83%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
LDE DIA+LK YGQG Y + +K ++ DI+ +K+VNEL+G+KESDTGLAPPALWD+ ADK
Sbjct: 27 LDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGLAPPALWDIAADK 86
Query: 442 QTLQNEQPLQI 452
Q +Q EQPLQ+
Sbjct: 87 QAMQQEQPLQV 97
Score = 250 (93.1 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 46/50 (92%), Positives = 49/50 (98%)
Query: 451 QIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
QIH+PLP KIDPTVTMMQVEEKPDVTYSD+GGCK+QIEKLREVVETPLLH
Sbjct: 150 QIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLH 199
Score = 166 (63.5 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 224 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 278
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 279 -IDAVGGARFDDGQGGDNEVQRTMLELINQLDGF 311
Score = 43 (20.2 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 255
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 532 (192.3 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 108/148 (72%), Positives = 120/148 (81%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E + E++ LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF L
Sbjct: 292 GGDNEVQRTMLELIN----QLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFAL 347
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PDL GR HI KIHA+ MSVERDIR++LLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA+
Sbjct: 348 PDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAT 407
Query: 601 EKDFLEAVNKVARCTKIINADSENPKYI 628
EKDFLEA+NKV + +A P+Y+
Sbjct: 408 EKDFLEAINKVVKGYAKFSA---TPRYL 432
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 112/201 (55%), Positives = 137/201 (68%)
Query: 519 PDTLDPALMRPGRLDRKVE---FGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNS 575
PD L + + + D K E F D EG + K + + E+ + C
Sbjct: 2 PDHLGDDMRKTKKDDTKEEEKNFQALD-EGDIAVLKRYGQGPYAEQLKTLDADIENCLKK 60
Query: 576 TGAEIRSVC-TEAGMFAIRARRKVASEKDFLEAVN--KVARCTKIINADSENPKYIINVK 632
E+ V ++ G+ A A +A++K ++ +VARCTKII +D +P+Y+INVK
Sbjct: 61 VN-ELSGVKESDTGL-APPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVK 118
Query: 633 QFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSD 692
QFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIH+PLP KIDPTVTMMQVEEKPDVTYSD
Sbjct: 119 QFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSD 178
Query: 693 IGGCKEQIEKLREVVETPLLH 713
+GGCK+QIEKLREVVETPLLH
Sbjct: 179 VGGCKDQIEKLREVVETPLLH 199
Score = 282 (104.3 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E + PE++VNLGIEPPKGVLL+GPPGTGKTLCARAVANRTDACFIRVIGSE
Sbjct: 187 EKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSE 246
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 247 LVQKYVGEGARM 258
Score = 260 (96.6 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 46/71 (64%), Positives = 59/71 (83%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
LDE DIA+LK YGQG Y + +K ++ DI+ +K+VNEL+G+KESDTGLAPPALWD+ ADK
Sbjct: 27 LDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGLAPPALWDIAADK 86
Query: 442 QTLQNEQPLQI 452
Q +Q EQPLQ+
Sbjct: 87 QAMQQEQPLQV 97
Score = 250 (93.1 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 46/50 (92%), Positives = 49/50 (98%)
Query: 451 QIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
QIH+PLP KIDPTVTMMQVEEKPDVTYSD+GGCK+QIEKLREVVETPLLH
Sbjct: 150 QIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLH 199
Score = 166 (63.5 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 47/94 (50%), Positives = 52/94 (55%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R R + L+ + E
Sbjct: 224 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDE--- 278
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELINQ + F
Sbjct: 279 -IDAVGGARFDDGQGGDNEVQRTMLELINQLDGF 311
Score = 43 (20.2 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 362 TGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQG 396
TG +CA V D+C + + +++ + K G+G
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEG 255
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 530 (191.6 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 107/151 (70%), Positives = 122/151 (80%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRKV
Sbjct: 280 FDDGAGGDNEVQ--RTMLEL-INQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKV 336
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EFGLPDLEGR HIF IHA++MS RDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARR
Sbjct: 337 EFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARR 396
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKY 627
KV SEKDFLEA++KV + +A S Y
Sbjct: 397 KVVSEKDFLEAIDKVIKSYAKFSATSRYMHY 427
Score = 430 (156.4 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 81/104 (77%), Positives = 90/104 (86%)
Query: 610 KVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPL 669
+VARCTKII+ N KYII VKQ AKFVV L D ++PTD+EEG+RVGVDRNKYQI IPL
Sbjct: 89 QVARCTKIIDVGKPNAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPL 148
Query: 670 PPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
PPKID +VTMMQVEEKPD+TY D+GGCKEQIEKLREVVE PLLH
Sbjct: 149 PPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLH 192
Score = 276 (102.2 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 54/72 (75%), Positives = 62/72 (86%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E+ + PEKFVNLGI+PPKGVL++GPPGTGKTLCARAVANRTDA F+RVIGSE
Sbjct: 180 EKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSE 239
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 240 LVQKYVGEGARM 251
Score = 238 (88.8 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 44/77 (57%), Positives = 57/77 (74%)
Query: 376 DSCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALW 435
++ V LDE DIALLKSYG G Y+KSI+ +E+DI+ + +VNEL GIKESDTG+ PP+ W
Sbjct: 14 ETAPVALDEGDIALLKSYGVGPYSKSIRILEEDIKKMTSKVNELCGIKESDTGIGPPSQW 73
Query: 436 DLTADKQTLQNEQPLQI 452
DL DK + E PLQ+
Sbjct: 74 DLVVDKTSAHEEPPLQV 90
Score = 235 (87.8 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 451 QIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
QI IPLPPKID +VTMMQVEEKPD+TY D+GGCKEQIEKLREVVE PLLH + F
Sbjct: 143 QIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKF 196
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/94 (45%), Positives = 49/94 (52%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDA F+RVIGSELVQKYVGEGA R F + + E
Sbjct: 217 KTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRD--LFQMARSKKACIIFFDE--- 271
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
+ NEVQRTMLELINQ + F
Sbjct: 272 -VDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 304
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 524 (189.5 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 106/150 (70%), Positives = 121/150 (80%)
Query: 480 IGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFG 539
+GG E + E+V LDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRKVEFG
Sbjct: 282 VGGDNEVQRTMLEIVN----QLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
Query: 540 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA 599
LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGM+AIRARRK
Sbjct: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTV 397
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYII 629
+EKDFL+AVNKV + + +A PKY++
Sbjct: 398 TEKDFLDAVNKVIKGYQKFSA---TPKYMV 424
Score = 449 (163.1 bits), Expect = 4.3e-65, Sum P(2) = 4.3e-65
Identities = 85/118 (72%), Positives = 101/118 (85%)
Query: 598 VASEKDFLEAVN--KVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 655
+ S+K ++ +VARCTKII+ ++E+ KY+INVKQ AKFVV L D V+PTDIEEGMR
Sbjct: 73 LVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
Query: 656 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
VGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+D+GGCKEQIEK+REVVE P+LH
Sbjct: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLH 190
Score = 270 (100.1 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 55/72 (76%), Positives = 60/72 (83%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++EL + PEKFV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSE
Sbjct: 178 EKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 237
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 238 LVQKYVGEGARM 249
Score = 240 (89.5 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 45/71 (63%), Positives = 57/71 (80%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
LDE DIALLK+YG G Y+ IK VE +I+ + K++N+L GIKESDTGLAPP+ WDL +DK
Sbjct: 18 LDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDK 77
Query: 442 QTLQNEQPLQI 452
Q +Q EQPLQ+
Sbjct: 78 QMMQEEQPLQV 88
Score = 235 (87.8 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
Identities = 43/54 (79%), Positives = 49/54 (90%)
Query: 451 QIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
QI IPLPPKIDP+VTMM VEEKPDVTY+D+GGCKEQIEK+REVVE P+LH + F
Sbjct: 141 QIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKF 194
Score = 160 (61.4 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 43/94 (45%), Positives = 50/94 (53%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDACFIRVIGSELVQKYVGEGA R F + + E
Sbjct: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE--LFQMARSKKACIVFFDE--- 269
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
+ NEVQRTMLE++NQ + F
Sbjct: 270 -VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF 302
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 499 (180.7 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 96/151 (63%), Positives = 126/151 (83%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKV+ ATNRP+TLDPAL+RPGR+DRKV
Sbjct: 296 FDDGAGGDNEVQ--RTMLEL-ITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKV 352
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGR +IF+IH+++MSVE+DIR+EL++RLCPN+TGAE+RSVCTEAGMFAIRARR
Sbjct: 353 EFSLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARR 412
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKY 627
KVA+EKDFL+AV+KV + ++ S+ +Y
Sbjct: 413 KVANEKDFLKAVDKVIKGNLKFSSTSQYMQY 443
Score = 396 (144.5 bits), Expect = 8.6e-55, Sum P(2) = 8.6e-55
Identities = 80/115 (69%), Positives = 95/115 (82%)
Query: 610 KVARCTKII------------NADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVG 657
+VARCTKII NAD+++ KY+IN+KQ AKFVV L + ++PTDIEEGMRVG
Sbjct: 94 QVARCTKIIEASQPQQPTGLQNADTKS-KYVINIKQIAKFVVGLGERLSPTDIEEGMRVG 152
Query: 658 VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLL 712
VDR+KY+I +PLPP+IDP+VTMM VEEKPDVTYSD+GGCKEQIEKLREVVE PLL
Sbjct: 153 VDRHKYEIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLL 207
Score = 270 (100.1 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 54/72 (75%), Positives = 61/72 (84%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++EL + PE+FV LGI+PPKG+LL+GPPGTGKTLCARAVANRTDA FIRVIGSE
Sbjct: 196 EKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSE 255
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 256 LVQKYVGEGARM 267
Score = 225 (84.3 bits), Expect = 8.2e-32, Sum P(2) = 8.2e-32
Identities = 42/54 (77%), Positives = 48/54 (88%)
Query: 451 QIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+I +PLPP+IDP+VTMM VEEKPDVTYSD+GGCKEQIEKLREVVE PLL + F
Sbjct: 159 EIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERF 212
Score = 200 (75.5 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
Identities = 37/71 (52%), Positives = 49/71 (69%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
L E DI +LK+YG Y S+K +E D++ + +R+ GIKESDTGLAPP LWD+ DK
Sbjct: 25 LTEGDIQVLKTYGTAPYADSLKEIEKDLKTIEERIKTNQGIKESDTGLAPPHLWDVLGDK 84
Query: 442 QTLQNEQPLQI 452
Q +Q EQ LQ+
Sbjct: 85 QRMQEEQSLQV 95
Score = 148 (57.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 43/94 (45%), Positives = 50/94 (53%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDA FIRVIGSELVQKYVGEGA R R + ++ + E
Sbjct: 233 KTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII--FFDE--- 287
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
+ NEVQRTMLELI Q + F
Sbjct: 288 -VDAIGGARFDDGAGGDNEVQRTMLELITQLDGF 320
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 501 (181.4 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 99/151 (65%), Positives = 124/151 (82%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKV+ ATNRP+TLDPAL+RPGR+DRKV
Sbjct: 319 FDDGAGGDNEVQ--RTMLEL-ITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKV 375
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPDLEGR +IF+IH++SMSVER IR+EL++RLCPNSTGAE+RSVCTEAGMFAIRARR
Sbjct: 376 EFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARR 435
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKY 627
KVA+EKDFL+AV+KV K ++ S +Y
Sbjct: 436 KVATEKDFLKAVDKVISGYKKFSSTSRYMQY 466
Score = 383 (139.9 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 71/92 (77%), Positives = 82/92 (89%)
Query: 621 DSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMM 680
D E+ KY+IN+KQ AKFVV L + V+PTDIEEGMRVGVDR+KY I +PLPP+IDP+VTMM
Sbjct: 139 DDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMM 198
Query: 681 QVEEKPDVTYSDIGGCKEQIEKLREVVETPLL 712
VEEKPDVTYSD+GGCK+QIEKLREVVE PLL
Sbjct: 199 TVEEKPDVTYSDVGGCKDQIEKLREVVELPLL 230
Score = 266 (98.7 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++EL + PE+F LGI+PPKG+LL+GPPGTGKTLCARAVANRTDA FIRVIGSE
Sbjct: 219 EKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSE 278
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 279 LVQKYVGEGARM 290
Score = 240 (89.5 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 62/143 (43%), Positives = 77/143 (53%)
Query: 367 CAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESD 426
C ++G +S + T D + S Q T A EDD A K V L I +
Sbjct: 102 CTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTD---ADEDDEDA--KYVINLKQIAKFV 156
Query: 427 TGLAPPAL-WDLTADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKE 485
GL D+ + + I +PLPP+IDP+VTMM VEEKPDVTYSD+GGCK+
Sbjct: 157 VGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKD 216
Query: 486 QIEKLREVVETPLLHLDGFDPRG 508
QIEKLREVVE PLL + F G
Sbjct: 217 QIEKLREVVELPLLSPERFATLG 239
Score = 192 (72.6 bits), Expect = 4.6e-69, Sum P(3) = 4.6e-69
Identities = 36/73 (49%), Positives = 47/73 (64%)
Query: 380 VTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTA 439
V L E DI +LKSYG Y +K E+D++ + R+ E G+KESDTGLAP LWD+
Sbjct: 27 VPLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMG 86
Query: 440 DKQTLQNEQPLQI 452
D+Q L E PLQ+
Sbjct: 87 DRQRLGEEHPLQV 99
Score = 149 (57.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 44/94 (46%), Positives = 50/94 (53%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDA FIRVIGSELVQKYVGEGA R R + ++ + E
Sbjct: 256 KTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII--FFDE--- 310
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELI Q + F
Sbjct: 311 -IDAVGGARFDDGAGGDNEVQRTMLELITQLDGF 343
Score = 51 (23.0 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 554 ARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKVAR 613
A+ E D++ ++ AR+ + E + + ++ I R+ E+ L+ VAR
Sbjct: 47 AKLKQTENDLK-DIEARIKEKAGVKESDTGLAPSHLWDIMGDRQRLGEEHPLQ----VAR 101
Query: 614 CTKIINADSEN 624
CTKII + E+
Sbjct: 102 CTKIIKGNGES 112
Score = 38 (18.4 bits), Expect = 4.6e-69, Sum P(3) = 4.6e-69
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 443 TLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEK 489
TL + P I + PP T+ V + D T+ + G E ++K
Sbjct: 237 TLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIG-SELVQK 282
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 494 (179.0 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 94/137 (68%), Positives = 117/137 (85%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFDPRGNIKVL ATNRP+TLD ALMRPGR+DRKV
Sbjct: 289 FDDGAGGDNEVQ--RTMLEL-ITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKV 345
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EFGLPDLEGR HI +IHA+SM++++DIR+EL+ARLCP+ TGAE+RSVCTEAGMFAIRARR
Sbjct: 346 EFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARR 405
Query: 597 KVASEKDFLEAVNKVAR 613
+VA+EKDFL+AV KV +
Sbjct: 406 RVATEKDFLDAVQKVVK 422
Score = 408 (148.7 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 85/123 (69%), Positives = 97/123 (78%)
Query: 592 IRARRKVASEKDFLEAVNKVARCTKII-NADS-ENPKYIINVKQFAKFVVDLADSVAPTD 649
+ A R+ SE+ L+ VARCTKII N S E Y+IN+KQ AKFVV L + V+PTD
Sbjct: 82 VAADRQRMSEEQPLQ----VARCTKIIENEQSAEKNAYVINLKQIAKFVVSLGERVSPTD 137
Query: 650 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVET 709
IEEGMRVG DRNKY I +PLPPKIDP+VTMMQVEEKPDVTY D+GGCKEQIE+LREVVE
Sbjct: 138 IEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVEL 197
Query: 710 PLL 712
PLL
Sbjct: 198 PLL 200
Score = 267 (99.0 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 52/69 (75%), Positives = 60/69 (86%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE+FV LGI+PPKG++L+GPPGTGKTLCARAVANRTDA FIRVIGSELVQ
Sbjct: 192 REVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQ 251
Query: 169 KYVGERVLM 177
KYVGE M
Sbjct: 252 KYVGEGARM 260
Score = 228 (85.3 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 40/71 (56%), Positives = 54/71 (76%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
LDE DI LLKSY G Y + + A+++D +AV+KR+N+ GIKESDTGLAP + WD+ AD+
Sbjct: 27 LDEGDIELLKSYATGPYARELAAIKEDTEAVLKRINDTVGIKESDTGLAPISFWDVAADR 86
Query: 442 QTLQNEQPLQI 452
Q + EQPLQ+
Sbjct: 87 QRMSEEQPLQV 97
Score = 225 (84.3 bits), Expect = 7.8e-35, Sum P(2) = 7.8e-35
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 452 IHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
I +PLPPKIDP+VTMMQVEEKPDVTY D+GGCKEQIE+LREVVE PLL + F
Sbjct: 153 IQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERF 205
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 44/94 (46%), Positives = 50/94 (53%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDA FIRVIGSELVQKYVGEGA R R + ++ + E
Sbjct: 226 KTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII--FFDE--- 280
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELI Q + F
Sbjct: 281 -IDAIGGARFDDGAGGDNEVQRTMLELITQLDGF 313
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 487 (176.5 bits), Expect = 1.7e-72, Sum P(2) = 1.7e-72
Identities = 102/155 (65%), Positives = 118/155 (76%)
Query: 480 IGGCK--EQIEKLREVVETPLL---HLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 534
IGG + E EV T L LDGFD RGNIKVLMATNRPDTLD AL+RPGR+DR
Sbjct: 267 IGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDR 326
Query: 535 KVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 594
++EF LPDLEGRTHIFKIHA +M++ RD+RFELLARLCPNSTG++IRSVCTEAGMFAIRA
Sbjct: 327 RIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRA 386
Query: 595 RRKVASEKDFLEAVNKVARCTKIINADSENPKYII 629
RRK +EKD L A+NKV K +A KY++
Sbjct: 387 RRKTITEKDLLLAINKVIHGCKQFSATG---KYMV 418
Score = 432 (157.1 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 83/103 (80%), Positives = 92/103 (89%)
Query: 610 KVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPL 669
+VARCTKIINAD++ KYIINVKQ AKFVV L D VAP+DIEEGMRVGVDR KY+I I L
Sbjct: 81 QVARCTKIINADTDQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILL 140
Query: 670 PPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLL 712
PPKIDP+VTMM VEEKPD+TY+DIGGCKEQ+EKLREVVE PLL
Sbjct: 141 PPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLL 183
Score = 265 (98.3 bits), Expect = 1.7e-72, Sum P(2) = 1.7e-72
Identities = 53/72 (73%), Positives = 61/72 (84%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E+ + QPE+FV LGI+PPKGVLL+GPPGTGKTL ARA+ANRTDACFI VIGSE
Sbjct: 172 EKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSE 231
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 232 LVQKYVGEGARM 243
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 52/109 (47%), Positives = 70/109 (64%)
Query: 399 TKSIKAVEDDIQAVI--KRVNE-LTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP 455
TK I A D + +I K++ + + G+ + +AP D+ + + +I I
Sbjct: 86 TKIINADTDQTKYIINVKQIAKFVVGLGDK---VAPS---DIEEGMRVGVDRTKYKIQIL 139
Query: 456 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
LPPKIDP+VTMM VEEKPD+TY+DIGGCKEQ+EKLREVVE PLL + F
Sbjct: 140 LPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERF 188
Score = 214 (80.4 bits), Expect = 4.1e-67, Sum P(2) = 4.1e-67
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
LD+ DI +LKSYG G Y+K+IK VE DI ++ +N+L G++ESDTGL P WDL DK
Sbjct: 12 LDDEDINILKSYGSGPYSKTIKKVEGDISGLLVNINKLCGVRESDTGLCLPNQWDLQLDK 71
Query: 442 QTLQNEQPLQI 452
Q L EQPLQ+
Sbjct: 72 QMLNEEQPLQV 82
Score = 160 (61.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 42/98 (42%), Positives = 52/98 (53%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + A+ANRTDACFI VIGSELVQKYVGEGA R F + ++ E
Sbjct: 209 KTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRE--LFQMAKSKKACILFIDE--- 263
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
+ +EVQRTMLE++NQ + F N G
Sbjct: 264 -VDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRG 300
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 487 (176.5 bits), Expect = 1.7e-72, Sum P(2) = 1.7e-72
Identities = 102/155 (65%), Positives = 118/155 (76%)
Query: 480 IGGCK--EQIEKLREVVETPLL---HLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 534
IGG + E EV T L LDGFD RGNIKVLMATNRPDTLD AL+RPGR+DR
Sbjct: 267 IGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDR 326
Query: 535 KVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 594
++EF LPDLEGRTHIFKIHA +M++ RD+RFELLARLCPNSTG++IRSVCTEAGMFAIRA
Sbjct: 327 RIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRA 386
Query: 595 RRKVASEKDFLEAVNKVARCTKIINADSENPKYII 629
RRK +EKD L A+NKV K +A KY++
Sbjct: 387 RRKTITEKDLLLAINKVIHGCKQFSATG---KYMV 418
Score = 432 (157.1 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 83/103 (80%), Positives = 92/103 (89%)
Query: 610 KVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPL 669
+VARCTKIINAD++ KYIINVKQ AKFVV L D VAP+DIEEGMRVGVDR KY+I I L
Sbjct: 81 QVARCTKIINADTDQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILL 140
Query: 670 PPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLL 712
PPKIDP+VTMM VEEKPD+TY+DIGGCKEQ+EKLREVVE PLL
Sbjct: 141 PPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLL 183
Score = 265 (98.3 bits), Expect = 1.7e-72, Sum P(2) = 1.7e-72
Identities = 53/72 (73%), Positives = 61/72 (84%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E+ + QPE+FV LGI+PPKGVLL+GPPGTGKTL ARA+ANRTDACFI VIGSE
Sbjct: 172 EKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSE 231
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 232 LVQKYVGEGARM 243
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 52/109 (47%), Positives = 70/109 (64%)
Query: 399 TKSIKAVEDDIQAVI--KRVNE-LTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP 455
TK I A D + +I K++ + + G+ + +AP D+ + + +I I
Sbjct: 86 TKIINADTDQTKYIINVKQIAKFVVGLGDK---VAPS---DIEEGMRVGVDRTKYKIQIL 139
Query: 456 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
LPPKIDP+VTMM VEEKPD+TY+DIGGCKEQ+EKLREVVE PLL + F
Sbjct: 140 LPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERF 188
Score = 214 (80.4 bits), Expect = 4.1e-67, Sum P(2) = 4.1e-67
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
LD+ DI +LKSYG G Y+K+IK VE DI ++ +N+L G++ESDTGL P WDL DK
Sbjct: 12 LDDEDINILKSYGSGPYSKTIKKVEGDISGLLVNINKLCGVRESDTGLCLPNQWDLQLDK 71
Query: 442 QTLQNEQPLQI 452
Q L EQPLQ+
Sbjct: 72 QMLNEEQPLQV 82
Score = 160 (61.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 42/98 (42%), Positives = 52/98 (53%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + A+ANRTDACFI VIGSELVQKYVGEGA R F + ++ E
Sbjct: 209 KTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRE--LFQMAKSKKACILFIDE--- 263
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
+ +EVQRTMLE++NQ + F N G
Sbjct: 264 -VDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRG 300
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 480 (174.0 bits), Expect = 3.5e-72, Sum P(2) = 3.5e-72
Identities = 95/151 (62%), Positives = 120/151 (79%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
+ D G +++ R ++E + LDGFD RGNIKV+ ATNRP TLDPALMRPGR+DRK+
Sbjct: 295 FDDGAGGDNEVQ--RTMLEL-ITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD+EGR +I +IHA+SMSVERDIR+EL++RLCPN+TGAE+RSV TEAGMFAIRARR
Sbjct: 352 EFSLPDVEGRANILRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRARR 411
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKY 627
KVA+EKDFL AV+KV + N+ + +Y
Sbjct: 412 KVATEKDFLAAVDKVIKGNLKFNSTATYMQY 442
Score = 391 (142.7 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 81/124 (65%), Positives = 97/124 (78%)
Query: 595 RRKVASEKDFLEAVNKVARCTKIIN--ADSENPKYIINVKQFAKFVVDLADSVAPTDIEE 652
R+++A E+ +VARCTKII DS+ KY+INVKQ AKFVV+L + V+PTDIEE
Sbjct: 88 RQRMAEEQPL-----QVARCTKIIQDEKDSDKSKYVINVKQIAKFVVNLGERVSPTDIEE 142
Query: 653 GM----RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 708
+ R+ VDRNKYQI +PLPPKIDP+VTMM VE+KPDVTY D+GGCKEQIEKLREVVE
Sbjct: 143 DLSHTDRLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVE 202
Query: 709 TPLL 712
PLL
Sbjct: 203 MPLL 206
Score = 271 (100.5 bits), Expect = 3.5e-72, Sum P(2) = 3.5e-72
Identities = 54/72 (75%), Positives = 61/72 (84%)
Query: 107 EVQRTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
E R ++E+ + PE+FVNLGI+PPKG LL+GPPGTGKTLCARAVANRTDA FIRVIGSE
Sbjct: 195 EKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSE 254
Query: 166 LVQKYVGERVLM 177
LVQKYVGE M
Sbjct: 255 LVQKYVGEGARM 266
Score = 224 (83.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 436 DLTADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
DL+ + + QI +PLPPKIDP+VTMM VE+KPDVTY D+GGCKEQIEKLREVVE
Sbjct: 143 DLSHTDRLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVE 202
Query: 496 TPLLHLDGF 504
PLL + F
Sbjct: 203 MPLLSPERF 211
Score = 195 (73.7 bits), Expect = 3.6e-64, Sum P(2) = 3.6e-64
Identities = 37/71 (52%), Positives = 49/71 (69%)
Query: 382 LDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADK 441
L + DIA+LK+YG Y ++K +E I+ VNE G+KESDTGLAPP LWD+ AD+
Sbjct: 29 LTDEDIAVLKTYGAAPYANALKKLEKQIKERQASVNEKIGVKESDTGLAPPHLWDVAADR 88
Query: 442 QTLQNEQPLQI 452
Q + EQPLQ+
Sbjct: 89 QRMAEEQPLQV 99
Score = 149 (57.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 44/94 (46%), Positives = 50/94 (53%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVANRTDA FIRVIGSELVQKYVGEGA R R + ++ + E
Sbjct: 232 KTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII--FFDE--- 286
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I NEVQRTMLELI Q + F
Sbjct: 287 -IDAVGGARFDDGAGGDNEVQRTMLELITQLDGF 319
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 347 (127.2 bits), Expect = 3.1e-49, Sum P(2) = 3.1e-49
Identities = 74/157 (47%), Positives = 104/157 (66%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ LDGFD G +KV+MATNRPD
Sbjct: 241 DHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPD 300
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+E GLP+ + R I KIH+ ++ +I FE + +L + A++
Sbjct: 301 TLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADL 360
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA R+ ++DF++AV KV ++
Sbjct: 361 RNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRL 397
Score = 199 (75.1 bits), Expect = 3.1e-49, Sum P(2) = 3.1e-49
Identities = 40/65 (61%), Positives = 48/65 (73%)
Query: 113 LELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
L LIN PE F +GI PPKG LLFGPPGTGKTL ARAVA++ D F++V+ S +V KY+G
Sbjct: 168 LPLIN-PELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIG 226
Query: 173 ERVLM 177
E M
Sbjct: 227 ESARM 231
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 40/116 (34%), Positives = 67/116 (57%)
Query: 600 SEKDF--LEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVG 657
SE D L++V ++ +++ SE K+I+ ++VV S+ ++++G RV
Sbjct: 60 SENDIKSLQSVGQIVG--EVLKQLSEE-KFIVKATNGPRYVVGCRRSINKEELKQGTRVS 116
Query: 658 VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
+D I LP ++DP V M E+ +++YSD+GG EQI +LREVVE PL++
Sbjct: 117 LDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLIN 172
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-------NEQPLQI 452
KS+++V + V+K+++E I ++ G + +K+ L+ + L I
Sbjct: 65 KSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTI 124
Query: 453 HIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
LP ++DP V M E+ +++YSD+GG EQI +LREVVE PL++ + F
Sbjct: 125 MRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELF 176
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 347 (127.2 bits), Expect = 3.1e-49, Sum P(2) = 3.1e-49
Identities = 74/157 (47%), Positives = 104/157 (66%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ LDGFD G +KV+MATNRPD
Sbjct: 241 DHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPD 300
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+E GLP+ + R I KIH+ ++ +I FE + +L + A++
Sbjct: 301 TLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADL 360
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA R+ ++DF++AV KV ++
Sbjct: 361 RNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRL 397
Score = 199 (75.1 bits), Expect = 3.1e-49, Sum P(2) = 3.1e-49
Identities = 40/65 (61%), Positives = 48/65 (73%)
Query: 113 LELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
L LIN PE F +GI PPKG LLFGPPGTGKTL ARAVA++ D F++V+ S +V KY+G
Sbjct: 168 LPLIN-PELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIG 226
Query: 173 ERVLM 177
E M
Sbjct: 227 ESARM 231
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 40/116 (34%), Positives = 67/116 (57%)
Query: 600 SEKDF--LEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVG 657
SE D L++V ++ +++ SE K+I+ ++VV S+ ++++G RV
Sbjct: 60 SENDIKSLQSVGQIVG--EVLKQLSEE-KFIVKATNGPRYVVGCRRSINKEELKQGTRVS 116
Query: 658 VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
+D I LP ++DP V M E+ +++YSD+GG EQI +LREVVE PL++
Sbjct: 117 LDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLIN 172
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-------NEQPLQI 452
KS+++V + V+K+++E I ++ G + +K+ L+ + L I
Sbjct: 65 KSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTI 124
Query: 453 HIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
LP ++DP V M E+ +++YSD+GG EQI +LREVVE PL++ + F
Sbjct: 125 MRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELF 176
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 338 (124.0 bits), Expect = 9.0e-49, Sum P(2) = 9.0e-49
Identities = 73/167 (43%), Positives = 105/167 (62%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
E +P + + D IGG + E RE+ T LL+ LDGFD G +K++MATNRPD
Sbjct: 230 EHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPD 289
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LDPAL+RPGRLDRK+E LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 290 VLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADL 349
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKIINADSENPKY 627
R++CTEAGMFAIRA R +DF++AV K++ K+ ++ N +
Sbjct: 350 RNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADF 396
Score = 204 (76.9 bits), Expect = 9.0e-49, Sum P(2) = 9.0e-49
Identities = 40/71 (56%), Positives = 55/71 (77%)
Query: 113 LELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
L L+N PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+G
Sbjct: 157 LPLMN-PELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIG 215
Query: 173 E--RVLMEGCN 181
E R++ E N
Sbjct: 216 ESARLIREMFN 226
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 594 ARRKVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
A+++ +D L+++ V + + +N + I+ ++VV V + G
Sbjct: 42 AKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSG 101
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
RV +D I LP ++DP V M E+ +++YS +GG +QI +LRE +E PL++
Sbjct: 102 TRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMN 161
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 337 (123.7 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 73/167 (43%), Positives = 105/167 (62%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
E +P + + D IGG + E RE+ T LL+ LDGFD G +K++MATNRPD
Sbjct: 230 EHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 289
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LDPAL+RPGRLDRK+E LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 290 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADL 349
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKIINADSENPKY 627
R++CTEAGMFAIRA R +DF++AV K++ K+ ++ N +
Sbjct: 350 RNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADF 396
Score = 204 (76.9 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 40/71 (56%), Positives = 55/71 (77%)
Query: 113 LELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
L L+N PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+G
Sbjct: 157 LPLMN-PELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIG 215
Query: 173 E--RVLMEGCN 181
E R++ E N
Sbjct: 216 ESARLIREMFN 226
Score = 145 (56.1 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 35/123 (28%), Positives = 64/123 (52%)
Query: 592 IRARRKVASE-KDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDI 650
+RA +K ++ +D L+++ V + + +N + I+ ++VV V +
Sbjct: 39 LRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKL 98
Query: 651 EEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETP 710
G RV +D I LP ++DP V M E+ +++YS +GG +QI +LRE +E P
Sbjct: 99 TSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELP 158
Query: 711 LLH 713
L++
Sbjct: 159 LMN 161
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 329 (120.9 bits), Expect = 2.6e-48, Sum P(2) = 2.6e-48
Identities = 69/150 (46%), Positives = 98/150 (65%)
Query: 462 PTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDT 521
P++ M +E + S + G + +++ + L LDGF+ NIKV+MATNR D
Sbjct: 269 PSIIFM--DEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI 326
Query: 522 LDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 581
LD AL+RPGR+DRK+EF PD + R I KIH+R M++ R IR + +A P ++GAE++
Sbjct: 327 LDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVK 386
Query: 582 SVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
SVCTEAGMFA+R RR +++DF AV KV
Sbjct: 387 SVCTEAGMFALRERRIHVTQEDFEMAVGKV 416
Score = 209 (78.6 bits), Expect = 2.6e-48, Sum P(2) = 2.6e-48
Identities = 43/69 (62%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQ
Sbjct: 188 KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQ 247
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 248 KFIGEGARM 256
Score = 182 (69.1 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 35/91 (38%), Positives = 56/91 (61%)
Query: 623 ENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 682
+ K ++ K++VD+A SV + + G RV + + Y IH LP K+DP V++M V
Sbjct: 107 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 166
Query: 683 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
E+ PD TY +GG QI++++EV+E P+ H
Sbjct: 167 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKH 197
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 379 QVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLT 438
+V L + +I+ L + QG + + D + ++K N G D A + L
Sbjct: 81 KVRLLKEEISHL--HEQGSHVGEVCKAMDKKKVLVK--NHPDGKYIVDVA-ASVDISTLA 135
Query: 439 ADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 498
A + IH LP K+DP V++M VE+ PD TY +GG QI++++EV+E P+
Sbjct: 136 AGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPV 195
Query: 499 LHLDGFDPRG 508
H + FD G
Sbjct: 196 KHPELFDALG 205
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 43/120 (35%), Positives = 59/120 (49%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + + I+Q + P G +AR AVA+ T+ FIRV GSELVQK++GEGA
Sbjct: 199 ELFDALGIAQPKGVLLYGPPG--TGKTLLAR-AVAHHTECTFIRVSGSELVQKFIGEGAR 255
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E I +EVQRTMLEL+NQ + F
Sbjct: 256 MVRELFVMAREHAPSII--FMDE----IDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGF 309
Score = 41 (19.5 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 187 VPNRMDRIVGGWTTEVNEYPWVVAL 211
VP+ +VGG T++ E V+ L
Sbjct: 169 VPDSTYEMVGGLDTQIKEIKEVIEL 193
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 326 (119.8 bits), Expect = 2.7e-48, Sum P(2) = 2.7e-48
Identities = 69/150 (46%), Positives = 96/150 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDT 521
P++ M +E + S + G +++ + L LDGF+ NIKV+MATNR D
Sbjct: 253 PSIIFM--DEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI 310
Query: 522 LDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 581
LDPAL+RPGR+DRK+EF PD + R I KIH+R M++ R I +A P ++GAE++
Sbjct: 311 LDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVK 370
Query: 582 SVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
SVCTEAGMFA+R RR +++DF AV KV
Sbjct: 371 SVCTEAGMFALRERRIHVTQEDFEMAVGKV 400
Score = 212 (79.7 bits), Expect = 2.7e-48, Sum P(2) = 2.7e-48
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLLFGPPGTGKTL ARAVA+ T+ FIRV GSELVQ
Sbjct: 172 KEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQ 231
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 232 KFIGEGARM 240
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 38/117 (32%), Positives = 67/117 (57%)
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRV 656
KV K+ L+ +++ ++ + K ++ V K+VVD+ S+ + G RV
Sbjct: 65 KVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARV 124
Query: 657 GVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
+ + Y +H LP K+DP V++M VE+ PD TY +GG +QI++++EV+E P+ H
Sbjct: 125 ALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKH 181
Score = 149 (57.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 37/120 (30%), Positives = 64/120 (53%)
Query: 389 LLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQ 448
L + + QG Y + D + ++K E + + D + +L T + L+ +
Sbjct: 73 LQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSL--NTGARVALRADS 130
Query: 449 PLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
+H LP K+DP V++M VE+ PD TY +GG +QI++++EV+E P+ H + FD G
Sbjct: 131 -YALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALG 189
Score = 128 (50.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 43/120 (35%), Positives = 59/120 (49%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + + I+Q + P G +AR AVA+ T+ FIRV GSELVQK++GEGA
Sbjct: 183 ELFDALGIAQPKGVLLFGPPG--TGKTLLAR-AVAHHTECTFIRVSGSELVQKFIGEGAR 239
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E I +EVQRTMLEL+NQ + F
Sbjct: 240 MVRELFVMAREHAPSII--FMDE----IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGF 293
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 321 (118.1 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 70/150 (46%), Positives = 95/150 (63%)
Query: 462 PTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDT 521
P++ M + + SD G E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 239 PSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRIDI 297
Query: 522 LDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 581
LDPAL+RPGR+DRK+EF P E R I +IH+RSM++ R I + +A ++GAE++
Sbjct: 298 LDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELK 357
Query: 582 SVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
VCTEAGMFA+R RR +++DF AV KV
Sbjct: 358 GVCTEAGMFALRERRVHVTQEDFELAVAKV 387
Score = 217 (81.4 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 43/65 (66%), Positives = 52/65 (80%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F +LGI PKG+LL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 158 KEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQ 217
Query: 169 KYVGE 173
KY+GE
Sbjct: 218 KYIGE 222
Score = 182 (69.1 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 35/98 (35%), Positives = 63/98 (64%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
++I +N K ++ V K+VVD++ + +I+ +RV + + YQ+ LP K+DP
Sbjct: 71 EVIKTMGKN-KVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDP 129
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY +GG ++QI++++EV+E P+ H
Sbjct: 130 LVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKH 167
Score = 139 (54.0 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDG 503
L+N+ I I LP K+DP V++M VE+ PD TY +GG ++QI++++EV+E P+ H +
Sbjct: 112 LRNDSYQLIKI-LPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPEL 170
Query: 504 FDPRG 508
F+ G
Sbjct: 171 FESLG 175
Score = 128 (50.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 36/94 (38%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQKY+GEG+ R R ++ ++ E
Sbjct: 192 KTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSII--FMDE--- 246
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
+ +EVQRTMLEL+NQ + F
Sbjct: 247 IDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGF 280
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 334 (122.6 bits), Expect = 5.1e-48, Sum P(2) = 5.1e-48
Identities = 72/157 (45%), Positives = 104/157 (66%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD G +K++MATNRPD
Sbjct: 232 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPD 291
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
+LDPAL+RPGRLDRK+E LP+ + R I KIHA ++ +I +E + +L N GA++
Sbjct: 292 SLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADL 351
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAG+FAIRA R+ + DF++AV KV+ K+
Sbjct: 352 RNVCTEAGLFAIRAEREYVIQGDFMKAVRKVSDNKKL 388
Score = 201 (75.8 bits), Expect = 5.1e-48, Sum P(2) = 5.1e-48
Identities = 41/71 (57%), Positives = 54/71 (76%)
Query: 113 LELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
L L+N PE F+ +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V KY+G
Sbjct: 159 LPLLN-PELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG 217
Query: 173 E--RVLMEGCN 181
E R++ E N
Sbjct: 218 ESARLIREMFN 228
Score = 163 (62.4 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 40/114 (35%), Positives = 59/114 (51%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + ++ G RV +D
Sbjct: 51 SEND-LKALQSVGQIVGEVLKQLTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALD 109
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
I LP ++DP V M E+ DVTYS IGG +QI +LREV+E PLL+
Sbjct: 110 MTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLN 163
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 52/174 (29%), Positives = 77/174 (44%)
Query: 338 LRATQVPVMSNQECRQFPGFEAKLTGNMMCAGYV----EGGKDSCQV-TLDEADIALLKS 392
+ T P+ N + + KL + G + E KD ++ E D+ L+S
Sbjct: 1 MTVTATPMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQS 60
Query: 393 YGQ--GQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPL 450
GQ G+ K + ED ++K N + L L T + + L
Sbjct: 61 VGQIVGEVLKQL--TEDKF--IVKATNGPRYVVGCRRQLDKAKLKSGT---RVALDMTTL 113
Query: 451 QIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
I LP ++DP V M E+ DVTYS IGG +QI +LREV+E PLL+ + F
Sbjct: 114 TIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELF 167
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 336 (123.3 bits), Expect = 1.0e-47, Sum P(2) = 1.0e-47
Identities = 72/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P V + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 228 DHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPD 287
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LDPAL+RPGRLDRK+E LP+ GR + KIHA +++ D+ +E +A+L A++
Sbjct: 288 VLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADL 347
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA R E+DF++AV K K+
Sbjct: 348 RNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKL 384
Score = 196 (74.1 bits), Expect = 1.0e-47, Sum P(2) = 1.0e-47
Identities = 40/78 (51%), Positives = 59/78 (75%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N+++ R ++EL + PE F+ +GI+ PKGVLL+GPPGTGKTL ARA+A+ +A F++V+
Sbjct: 144 NQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVV 203
Query: 163 GSELVQKYVGE--RVLME 178
S +V KY+GE RV+ E
Sbjct: 204 SSAIVDKYIGESARVIRE 221
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 35/136 (25%), Positives = 62/136 (45%)
Query: 578 AEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKF 637
AE+R +A + ++ +D ++ + + + + ++I+ ++
Sbjct: 25 AELR--LNKAHELIKKLKKDFQKTEDHIKTIQYIGEIIGEVLRSLDEERFIVKACNGPRY 82
Query: 638 VVDLADSVAPTDI-EEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGC 696
VV A+ + G RV +D I LP ++DP + M E V+Y +IGG
Sbjct: 83 VVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGL 142
Query: 697 KEQIEKLREVVETPLL 712
QI +LREVVE PL+
Sbjct: 143 SNQIRELREVVELPLM 158
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 243 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 299
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 162 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 221
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 222 KFIGEGARM 230
Score = 185 (70.2 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 35/91 (38%), Positives = 56/91 (61%)
Query: 623 ENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 682
+ K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP V++M V
Sbjct: 81 DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMV 140
Query: 683 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
E+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 171
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 42/133 (31%), Positives = 74/133 (55%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + V D + ++K E + + D + + D
Sbjct: 53 NAKVRLLREELQLLQE--QGSYVGEVVRVMDKKKVLVKVHPEGKFVVDVDKNID---IND 107
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 108 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 166
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 167 LPVKHPELFEALG 179
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 250
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 251 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 283
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 251 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 307
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 308 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 367
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 368 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 398
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 170 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 229
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 230 KFIGEGARM 238
Score = 187 (70.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 83 EVVRA-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 141
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 142 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 179
Score = 155 (59.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 61 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDIDKNID---IND 115
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 116 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 174
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 175 LPVKHPELFEALG 187
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 204 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 258
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 259 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 291
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 249 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 305
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 306 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 365
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 366 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 396
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 168 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 227
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 228 KFIGEGARM 236
Score = 186 (70.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 81 EVVRA-MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 139
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 140 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 177
Score = 155 (59.6 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 59 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNID---IND 113
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 114 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 172
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 173 LPVKHPELFEALG 185
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 202 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 256
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 257 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 289
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 243 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 299
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 162 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 221
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 222 KFIGEGARM 230
Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 75 EVVRA-MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 133
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 134 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 171
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 53 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNID---IND 107
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 108 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 166
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 167 LPVKHPELFEALG 179
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 250
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 251 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 283
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 243 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 299
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 162 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 221
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 222 KFIGEGARM 230
Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 75 EVVRA-MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 133
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 134 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 171
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 53 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNID---IND 107
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 108 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 166
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 167 LPVKHPELFEALG 179
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 250
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 251 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 283
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 243 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 299
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 162 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 221
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 222 KFIGEGARM 230
Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 75 EVVRA-MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 133
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 134 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 171
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 53 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNID---IND 107
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 108 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 166
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 167 LPVKHPELFEALG 179
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 250
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 251 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 283
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 251 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 307
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 308 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 367
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 368 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 398
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 170 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 229
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 230 KFIGEGARM 238
Score = 186 (70.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 83 EVVRA-MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 141
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 142 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 179
Score = 155 (59.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 61 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNID---IND 115
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 116 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 174
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 175 LPVKHPELFEALG 187
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 204 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 258
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 259 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 291
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 243 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 299
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 162 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 221
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 222 KFIGEGARM 230
Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 75 EVVRA-MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 133
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 134 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 171
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 53 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNID---IND 107
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 108 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 166
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 167 LPVKHPELFEALG 179
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 250
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 251 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 283
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 243 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 299
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 162 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 221
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 222 KFIGEGARM 230
Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 75 EVVRA-MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 133
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 134 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 171
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 53 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNID---IND 107
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 108 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 166
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 167 LPVKHPELFEALG 179
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 250
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 251 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 283
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 318 (117.0 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S + GG E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 243 PSIIFM--DEIDSIGSSRLEGGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 299
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
Score = 214 (80.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 162 KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 221
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 222 KFIGEGARM 230
Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 75 EVVRA-MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 133
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 134 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 171
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 53 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNID---IND 107
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 108 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 166
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 167 LPVKHPELFEALG 179
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 250
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I +EVQRTMLEL+NQ + F
Sbjct: 251 -IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 283
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 354 (129.7 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 77/157 (49%), Positives = 101/157 (64%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLL-HLDGFDPRGNIKVLMATNRPD 520
E +P + + D IGG + + RE+ T LL HLDGF+ GN+K++MATNRPD
Sbjct: 228 EHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPD 287
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LDPAL+RPGRLDRK+E LP+ R I KIHA M+ DI +E + RLC GA++
Sbjct: 288 VLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADL 347
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA R E+DF +A K++ K+
Sbjct: 348 RNVCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKKL 384
Score = 175 (66.7 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 37/75 (49%), Positives = 53/75 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL I P + +GI+ PKGVLL+GPPGTGKTL ARA+A+ + F+R++ S +V
Sbjct: 150 REVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVD 209
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 210 KYIGESARIIREMFN 224
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 39/141 (27%), Positives = 67/141 (47%)
Query: 579 EIRSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFV 638
EI S + + +K +D L+A+ V + + E+ K+I+ ++V
Sbjct: 19 EIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQVLKQLEDEKFIVKASSGPRYV 78
Query: 639 VDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV-TMMQVEEKPD-----VTYSD 692
V + + + G RV +D + LP ++DP V M+ +K + V Y+
Sbjct: 79 VGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKSENSTNKVNYNQ 138
Query: 693 IGGCKEQIEKLREVVETPLLH 713
IGG EQI ++REVVE P+L+
Sbjct: 139 IGGLSEQIRQMREVVELPILN 159
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 354 (129.7 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 77/157 (49%), Positives = 101/157 (64%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLL-HLDGFDPRGNIKVLMATNRPD 520
E +P + + D IGG + + RE+ T LL HLDGF+ GN+K++MATNRPD
Sbjct: 228 EHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPD 287
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LDPAL+RPGRLDRK+E LP+ R I KIHA M+ DI +E + RLC GA++
Sbjct: 288 VLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADL 347
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA R E+DF +A K++ K+
Sbjct: 348 RNVCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKKL 384
Score = 175 (66.7 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 37/75 (49%), Positives = 53/75 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL I P + +GI+ PKGVLL+GPPGTGKTL ARA+A+ + F+R++ S +V
Sbjct: 150 REVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVD 209
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 210 KYIGESARIIREMFN 224
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 39/141 (27%), Positives = 67/141 (47%)
Query: 579 EIRSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFV 638
EI S + + +K +D L+A+ V + + E+ K+I+ ++V
Sbjct: 19 EIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQVLKQLEDEKFIVKASSGPRYV 78
Query: 639 VDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV-TMMQVEEKPD-----VTYSD 692
V + + + G RV +D + LP ++DP V M+ +K + V Y+
Sbjct: 79 VGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKSENSTNKVNYNQ 138
Query: 693 IGGCKEQIEKLREVVETPLLH 713
IGG EQI ++REVVE P+L+
Sbjct: 139 IGGLSEQIRQMREVVELPILN 159
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 322 (118.4 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 72/151 (47%), Positives = 97/151 (64%)
Query: 462 PTVTMMQVEEKPDVTYSDI-GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +E + S I G E R ++E L LDGF+ NIKV+MATNR D
Sbjct: 242 PSIIFM--DEIDSIGSSRIESGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRID 298
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LDPAL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A L P ++GAE+
Sbjct: 299 ILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 358
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 359 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 389
Score = 208 (78.3 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 42/65 (64%), Positives = 51/65 (78%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQ
Sbjct: 161 KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQ 220
Query: 169 KYVGE 173
K++GE
Sbjct: 221 KFIGE 225
Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 35/91 (38%), Positives = 55/91 (60%)
Query: 623 ENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 682
+ K ++ V KFVVDL ++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 80 DKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 139
Query: 683 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
E+ PD TY +GG +QI++++EV+E P+ H
Sbjct: 140 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKH 170
Score = 157 (60.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V + ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 52 NAKVRMLREELQLLQE--QGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNID---IND 106
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+NE +H LP K+DP V++M VE+ PD TY +GG +QI++++EV+E
Sbjct: 107 VTPNCRVALRNES-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIE 165
Query: 496 TPLLHLDGFDPRG 508
P+ H + FD G
Sbjct: 166 LPVKHPELFDALG 178
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 42/120 (35%), Positives = 59/120 (49%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + + I+Q + P G +AR AVA+ T+ FIRV GSELVQK++GEG+
Sbjct: 172 ELFDALGIAQPKGVLLYGPPG--TGKTLLAR-AVAHHTECTFIRVSGSELVQKFIGEGSR 228
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E I +EVQRTMLEL+NQ + F
Sbjct: 229 MVRELFVMAREHAPSII--FMDE----IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 282
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 307 (113.1 bits), Expect = 3.7e-47, Sum P(2) = 3.7e-47
Identities = 66/136 (48%), Positives = 92/136 (67%)
Query: 478 SDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVE 537
S GG +++ R ++E L LDGF+ NIKVLM TNR D LDPAL+RPGR+DRK+E
Sbjct: 257 SGSGGGDSEVQ--RTMLEL-LNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIE 313
Query: 538 FGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 597
F P GR I KIH+R M++ R I + ++ ++GAE+++VCTEAGM+A+R RR
Sbjct: 314 FPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRV 373
Query: 598 VASEKDFLEAVNKVAR 613
S++DF AV+KV +
Sbjct: 374 HVSQEDFEMAVSKVMK 389
Score = 221 (82.9 bits), Expect = 3.7e-47, Sum P(2) = 3.7e-47
Identities = 45/65 (69%), Positives = 52/65 (80%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL I PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 158 KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 217
Query: 169 KYVGE 173
KY+GE
Sbjct: 218 KYIGE 222
Score = 181 (68.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 39/118 (33%), Positives = 67/118 (56%)
Query: 597 KVASEKDFLEAV-NKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 655
+V K+ L+ + N + +++ +N K ++ V KFVVD+ +V + R
Sbjct: 51 RVRMLKEELQLLTNPGSHVAEVVKLMGKN-KVLVKVNPEGKFVVDIDPTVDIAKLTPSTR 109
Query: 656 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
+ Y +H LP KIDP V++M+VE+ PD TY +GG +QI++++EV+E P+ H
Sbjct: 110 AALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKH 167
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 437 LTADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVET 496
LT + + +H LP KIDP V++M+VE+ PD TY +GG +QI++++EV+E
Sbjct: 104 LTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIEL 163
Query: 497 PLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 164 PIKHPELFESLG 175
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 43/120 (35%), Positives = 58/120 (48%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + I+Q + P G +AR AVA+ TD FIRV GSELVQKY+GEG+
Sbjct: 169 ELFESLGIAQPKGVLLYGPPG--TGKTLLAR-AVAHHTDCTFIRVSGSELVQKYIGEGSR 225
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E + +EVQRTMLEL+NQ + F
Sbjct: 226 MVRELFIMAREHAPSII--FMDE---IDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGF 280
Score = 38 (18.4 bits), Expect = 5.8e-28, Sum P(2) = 5.8e-28
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 442 QTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEK 489
++L QP + + PP T+ V D T+ + G E ++K
Sbjct: 172 ESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG-SELVQK 218
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 309 (113.8 bits), Expect = 5.9e-47, Sum P(2) = 5.9e-47
Identities = 66/150 (44%), Positives = 94/150 (62%)
Query: 462 PTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDT 521
P++ M + + D G + E R ++E L LDGF+P NIK++MATNR D
Sbjct: 226 PSIIFMDEIDSIGSSRIDSAGSGDS-EVQRTMLEL-LNQLDGFEPTKNIKIIMATNRLDI 283
Query: 522 LDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 581
LDPAL+RPGR+DRK+EF P +E R I +IH+RSM++ R I +A +GAE++
Sbjct: 284 LDPALLRPGRIDRKIEFPPPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELK 343
Query: 582 SVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
VCTEAGM+A+R RR +++DF A K+
Sbjct: 344 GVCTEAGMYALRERRVHVTQEDFDLATAKI 373
Score = 217 (81.4 bits), Expect = 5.9e-47, Sum P(2) = 5.9e-47
Identities = 44/65 (67%), Positives = 52/65 (80%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 145 KEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQ 204
Query: 169 KYVGE 173
KY+GE
Sbjct: 205 KYIGE 209
Score = 173 (66.0 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 626 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 685
K ++ V K+VVD+AD V + G RV + + Y++ LP +DP V++M VE+
Sbjct: 67 KVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEKV 126
Query: 686 PDVTYSDIGGCKEQIEKLREVVETPLLH 713
PD TY IGG +QI++++EV+E L H
Sbjct: 127 PDSTYDMIGGLDQQIKEIKEVIELGLKH 154
Score = 136 (52.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 47/131 (35%), Positives = 62/131 (47%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + I+Q + P G +AR AVA+ TD FIRV GSELVQKY+GEG+
Sbjct: 156 ELFESLGIAQPKGVLLYGPPG--TGKTLLAR-AVAHHTDCRFIRVSGSELVQKYIGEGSR 212
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E I +EVQRTMLEL+NQ +
Sbjct: 213 MVRELFVMAREHAPSII--FMDE----IDSIGSSRIDSAGSGDSEVQRTMLELLNQLD-- 264
Query: 123 VNLGIEPPKGV 133
G EP K +
Sbjct: 265 ---GFEPTKNI 272
Score = 131 (51.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 379 QVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLT 438
+V L ++ LL+ G Y + V + ++K E + + G+ + LT
Sbjct: 38 RVRLLREELGLLQQ--PGSYVGEVVKVMSTKKVLVKVHPEGKYVVDIADGVD---IGKLT 92
Query: 439 ADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 498
K+ ++ LP +DP V++M VE+ PD TY IGG +QI++++EV+E L
Sbjct: 93 VGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGL 152
Query: 499 LHLDGFDPRG 508
H + F+ G
Sbjct: 153 KHPELFESLG 162
Score = 38 (18.4 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 13/65 (20%), Positives = 33/65 (50%)
Query: 239 SKRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLE 298
S+ ++L V+ EH + ++ +I++ + + ++ G+ + +L+L L+
Sbjct: 211 SRMVRELFVMAREHAPSIIFMDEIDS------IGSSRIDSAGSGDSEVQRTMLELLNQLD 264
Query: 299 -FKPT 302
F+PT
Sbjct: 265 GFEPT 269
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 320 (117.7 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 70/157 (44%), Positives = 99/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ LDGFD G +K++MATNRPD
Sbjct: 231 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPD 290
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LDPAL+RPGRLDRK+E LP+ + R + KIHA ++ +I +E + +L GA++
Sbjct: 291 VLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 350
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGM AIRA R +DF++AV K+ K+
Sbjct: 351 RNVCTEAGMAAIRAERDYVVHEDFMKAVRKLNDAKKL 387
Score = 202 (76.2 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 38/68 (55%), Positives = 54/68 (79%)
Query: 113 LELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
L L+N PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++++ S ++ KY+G
Sbjct: 158 LPLMN-PELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIG 216
Query: 173 E--RVLME 178
E R++ E
Sbjct: 217 ESARLIRE 224
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 594 ARRKVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
A++ +D L+++ V + + +N ++I+ ++VV V + G
Sbjct: 43 AKKDFTKTEDDLKSLQSVGQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSG 102
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
RV +D I LP ++DP V M E+ +V+YS +GG +QI +LRE +E PL++
Sbjct: 103 TRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMN 162
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 325 (119.5 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
Identities = 71/157 (45%), Positives = 102/157 (64%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 224 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 283
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIH+ ++ DI +E + +L GA++
Sbjct: 284 TLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADL 343
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA + +++DF++AV KVA K+
Sbjct: 344 RNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKL 380
Score = 196 (74.1 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 146 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 205
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 206 KYIGESARLIREMFN 220
Score = 156 (60.0 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 38/112 (33%), Positives = 58/112 (51%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 43 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ V+YS+IGG EQI +LREV+E PL
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPL 153
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 41/130 (31%), Positives = 64/130 (49%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 36 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 95
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ V+YS+IGG EQI +LREV+E PL +
Sbjct: 96 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTN 155
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 156 PELFQRVGII 165
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 310 (114.2 bits), Expect = 4.0e-46, Sum P(2) = 4.0e-46
Identities = 70/155 (45%), Positives = 97/155 (62%)
Query: 466 MMQVEEKPDVTYSD----IGGCKEQI-----EKLREVVETPLLHLDGFDPRGNIKVLMAT 516
+M E P + + D IG + + E R ++E L LDGF+ NIKV+MAT
Sbjct: 230 VMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQRTMLEL-LNQLDGFEATKNIKVIMAT 288
Query: 517 NRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNST 576
NR D LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I +A P ++
Sbjct: 289 NRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGAS 348
Query: 577 GAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
GAE++ VCTEAGM+A+R RR +++DF AV+KV
Sbjct: 349 GAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKV 383
Score = 208 (78.3 bits), Expect = 4.0e-46, Sum P(2) = 4.0e-46
Identities = 42/65 (64%), Positives = 51/65 (78%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQ
Sbjct: 156 KEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQ 215
Query: 169 KYVGE 173
K++GE
Sbjct: 216 KFIGE 220
Score = 178 (67.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 34/98 (34%), Positives = 59/98 (60%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ +N K ++ V K+VVD+ ++ D+ RV + Y +H LP K+DP
Sbjct: 69 EVVKPMDKN-KVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDP 127
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY +GG +QI++++EV+E P+ H
Sbjct: 128 LVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKH 165
Score = 157 (60.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 42/131 (32%), Positives = 72/131 (54%)
Query: 379 QVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLT 438
+V L ++ LL+ QG Y + D + ++K E + + D + + D+T
Sbjct: 49 KVRLLREELQLLQE--QGSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTIN---IKDVT 103
Query: 439 -ADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETP 497
+ + L+NE +H LP K+DP V++M VE+ PD TY +GG +QI++++EV+E P
Sbjct: 104 PSSRVALRNES-YTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELP 162
Query: 498 LLHLDGFDPRG 508
+ H + FD G
Sbjct: 163 VKHPELFDALG 173
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 41/120 (34%), Positives = 58/120 (48%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + + I+Q + P G +AR AVA+ T+ FIRV GSELVQK++GEG+
Sbjct: 167 ELFDALGITQPKGVLLYGPPG--TGKTLLAR-AVAHHTECTFIRVSGSELVQKFIGEGSR 223
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E +EVQRTMLEL+NQ + F
Sbjct: 224 MVRELFVMAREHAPSII--FMDE-----IDSIGSARLETGTGDSEVQRTMLELLNQLDGF 276
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 296 (109.3 bits), Expect = 5.8e-46, Sum P(2) = 5.8e-46
Identities = 60/135 (44%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 222 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 278
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 279 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 338
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 339 MKVTNEDFKKSKENV 353
Score = 221 (82.9 bits), Expect = 5.8e-46, Sum P(2) = 5.8e-46
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 119 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 178
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 179 GSELIQKYLGD 189
Score = 127 (49.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 159 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 213
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 214 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 250
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 49 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 108
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 109 ETYADIGGLDNQIQEIKESVELPLTH 134
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 95 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 142
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 238 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 297
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 298 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 357
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 358 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 394
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 160 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 219
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 220 KYIGESARLIREMFN 234
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 39/112 (34%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 57 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 115
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ DV+YS+IGG EQI +LREV+E PL
Sbjct: 116 MTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPL 167
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 42/130 (32%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 50 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 109
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ DV+YS+IGG EQI +LREV+E PL +
Sbjct: 110 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTN 169
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 170 PELFQRVGII 179
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 224 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 283
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 284 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 343
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 146 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 205
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 206 KYIGESARLIREMFN 220
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/112 (34%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 43 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ DV+YS+IGG EQI +LREV+E PL
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPL 153
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 42/130 (32%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 36 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 95
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ DV+YS+IGG EQI +LREV+E PL +
Sbjct: 96 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTN 155
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 156 PELFQRVGII 165
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 224 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 283
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 284 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 343
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 146 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 205
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 206 KYIGESARLIREMFN 220
Score = 157 (60.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 43 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 36 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 95
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL +
Sbjct: 96 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 155
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 156 PELFQRVGII 165
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 230 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 289
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 290 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 349
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 350 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 386
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 152 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 211
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 212 KYIGESARLIREMFN 226
Score = 157 (60.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 49 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 107
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL
Sbjct: 108 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 159
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 42 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 101
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL +
Sbjct: 102 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 161
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 162 PELFQRVGII 171
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 224 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 283
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 284 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 343
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 146 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 205
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 206 KYIGESARLIREMFN 220
Score = 157 (60.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 43 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 36 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 95
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL +
Sbjct: 96 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 155
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 156 PELFQRVGII 165
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 238 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 297
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 298 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 357
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 358 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 394
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 160 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 219
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 220 KYIGESARLIREMFN 234
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 57 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 115
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL
Sbjct: 116 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 167
Score = 121 (47.7 bits), Expect = 0.00042, P = 0.00042
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 50 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 109
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL +
Sbjct: 110 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 169
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 170 PELFQRVGII 179
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 224 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 283
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 284 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 343
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 146 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 205
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 206 KYIGESARLIREMFN 220
Score = 157 (60.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 43 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 36 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 95
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL +
Sbjct: 96 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 155
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 156 PELFQRVGII 165
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 224 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 283
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 284 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 343
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 146 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 205
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 206 KYIGESARLIREMFN 220
Score = 157 (60.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 43 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 36 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 95
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL +
Sbjct: 96 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 155
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 156 PELFQRVGII 165
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 216 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 275
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 276 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 335
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 336 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 372
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 138 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 197
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 198 KYIGESARLIREMFN 212
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 35 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 93
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL
Sbjct: 94 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 145
Score = 121 (47.7 bits), Expect = 0.00038, P = 0.00038
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 28 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 87
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL +
Sbjct: 88 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 147
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 148 PELFQRVGII 157
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 320 (117.7 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 71/157 (45%), Positives = 100/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 238 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 297
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 298 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 357
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 358 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 394
Score = 196 (74.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 160 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 219
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 220 KYIGESARLIREMFN 234
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 57 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 115
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL
Sbjct: 116 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 167
Score = 121 (47.7 bits), Expect = 0.00042, P = 0.00042
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 50 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 109
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL +
Sbjct: 110 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 169
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 170 PELFQRVGII 179
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 319 (117.4 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 73/157 (46%), Positives = 99/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
E +P + + D IGG + E RE+ T LL+ LDGFD G K++MATNRPD
Sbjct: 228 EHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPD 287
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+R GRLDRK+E LP+ GR I KIH+ ++ +E DI FE + ++ GA++
Sbjct: 288 TLDPALLRAGRLDRKIEIPLPNEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADL 347
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+V TEAG+FAI+ R ++ DF AV KVA K+
Sbjct: 348 RNVVTEAGLFAIKDYRDAINQDDFNRAVRKVAEAKKL 384
Score = 197 (74.4 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 39/72 (54%), Positives = 54/72 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI+PPKGVLL+GPPGTGKTL ARAVA+ + F++V+ S +V
Sbjct: 150 REVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVD 209
Query: 169 KYVGE--RVLME 178
KY+GE R++ E
Sbjct: 210 KYIGESARLIRE 221
Score = 147 (56.8 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 32/112 (28%), Positives = 60/112 (53%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE++ ++A+ V + + + ++I+ ++VV V + +++G RV +D
Sbjct: 47 SEEN-IKALQSVGQIIGEVLKQLDEERFIVKASSGPRYVVGCRSKVDRSKLKQGTRVALD 105
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M +E+ + ++ IGG +QI +LREV+E PL
Sbjct: 106 MTTLTIMRMLPREVDPLVYNMSLEDPGQINFAGIGGLNDQIRELREVIELPL 157
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 319 (117.4 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 69/157 (43%), Positives = 102/157 (64%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD G +K++MATNRPD
Sbjct: 233 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPD 292
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+E LP+ R I KIHA ++ +I +E + +L GA++
Sbjct: 293 TLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADL 352
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R++CTEAG+FA+R R+ ++DF++AV K+A K+
Sbjct: 353 RNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKL 389
Score = 196 (74.1 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 38/68 (55%), Positives = 53/68 (77%)
Query: 113 LELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
L L+N P+ F+ +GI PPKG LL+GPPGTGKTL ARA+A++ DA F++V+ S +V KY+G
Sbjct: 160 LPLLN-PDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIG 218
Query: 173 E--RVLME 178
E R++ E
Sbjct: 219 ESARLIRE 226
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 42/133 (31%), Positives = 68/133 (51%)
Query: 586 EAGMFAIRARRKVAS---EK--DFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVD 640
E+ + A+R + KV + EK D L+A+ V + I +I+ ++VV
Sbjct: 32 ESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPDNFIVKASNGPRYVVG 91
Query: 641 LADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQI 700
+ ++ G RV +D I LP ++DP V M E+ +V Y++IGG +QI
Sbjct: 92 CRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQI 151
Query: 701 EKLREVVETPLLH 713
+LREV+E PLL+
Sbjct: 152 RELREVIELPLLN 164
>FB|FBgn0034661 [details] [associations]
symbol:CG4386 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=IEA;NAS] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA;NAS]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 EMBL:AE013599
GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640
HSSP:P00760 GeneTree:ENSGT00700000104440 OrthoDB:EOG4ZPC9Q
EMBL:AY052010 RefSeq:NP_611611.1 UniGene:Dm.727 SMR:Q9W2C8
IntAct:Q9W2C8 MINT:MINT-800672 MEROPS:S01.B42
EnsemblMetazoa:FBtr0071743 GeneID:37486 KEGG:dme:Dmel_CG4386
UCSC:CG4386-RA FlyBase:FBgn0034661 InParanoid:Q9W2C8 OMA:QETEVHQ
GenomeRNAi:37486 NextBio:803896 Uniprot:Q9W2C8
Length = 372
Score = 481 (174.4 bits), Expect = 1.1e-45, P = 1.1e-45
Identities = 88/200 (44%), Positives = 134/200 (67%)
Query: 180 CNNEGCGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSS 239
C++ CG+ N RIVGG TEV++YPWV L G+F+C +L++D+++LTA+HCV
Sbjct: 113 CSDCVCGIANIQKRIVGGQETEVHQYPWVAMLLYGGRFYCAASLLNDQFLLTASHCVYGF 172
Query: 240 KRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEF 299
++++ + V + EH+R + +I+ R+V +V+THPKYNA +++D+DIA++KLD P+EF
Sbjct: 173 RKER-ISVRLLEHDRKMSHMQKID-RKVAEVITHPKYNA---RNYDNDIAIIKLDEPVEF 227
Query: 300 KPTVSPVCLPQLGEKFTQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEA 359
+ PVC+P G F G V GWG ++ G + L+ QVP++S ECR+ +
Sbjct: 228 NEVLHPVCMPTPGRSFKGENGIVTGWGALKVGGPTSDTLQEVQVPILSQDECRK-SRYGN 286
Query: 360 KLTGNMMCAGYVEGGKDSCQ 379
K+T NM+C GY EGGKDSCQ
Sbjct: 287 KITDNMLCGGYDEGGKDSCQ 306
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 302 (111.4 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 64/150 (42%), Positives = 94/150 (62%)
Query: 462 PTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDT 521
P++ M +E + S + G +++ + L LDGF+ +IK++MATNR D
Sbjct: 238 PSIIFM--DEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDI 295
Query: 522 LDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 581
LDPAL+RPGR+DRK+EF P + RT I KIH+RSM++ R I +A +GA+++
Sbjct: 296 LDPALLRPGRIDRKIEFPAPTVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVK 355
Query: 582 SVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
VCTEAGM+A+R RR +++DF AV KV
Sbjct: 356 GVCTEAGMYALRERRIHVTQEDFELAVAKV 385
Score = 212 (79.7 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F +LGI PKGV+L+GPPGTGKTL ARAVA+ T+ FIRV GSELVQ
Sbjct: 157 KEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQ 216
Query: 169 KYVGE 173
KY+GE
Sbjct: 217 KYIGE 221
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 579 EIRSVCTEAGMFAIRARR-----KVASEKDFLEAVNK----VARCTKIINADSENPKYII 629
EIR T + + A+R KV KD L+ + + V K++ K ++
Sbjct: 27 EIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELKLLQEPGSYVGEVVKVMGLK----KVLV 82
Query: 630 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVT 689
+ KF+V++ + + +RV + + + ++ LP K+DP V++M VE+ PD T
Sbjct: 83 KIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLMMVEKVPDST 142
Query: 690 YSDIGGCKEQIEKLREVVETPLLH 713
Y +GG +QI++++EV+E P+ H
Sbjct: 143 YDMVGGLDKQIKEIKEVIELPVKH 166
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 456 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
LP K+DP V++M VE+ PD TY +GG +QI++++EV+E P+ H + F+ G
Sbjct: 122 LPTKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLG 174
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 44/120 (36%), Positives = 58/120 (48%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + I+Q I P G +AR AVA+ T+ FIRV GSELVQKY+GEG+
Sbjct: 168 ELFESLGIAQPKGVILYGPPG--TGKTLLAR-AVAHHTECKFIRVSGSELVQKYIGEGSR 224
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E I +EVQRTMLEL+NQ + F
Sbjct: 225 MVRELFVMAREHAPSII--FMDE----IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGF 278
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 300 (110.7 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 63/151 (41%), Positives = 94/151 (62%)
Query: 462 PTVTMM-QVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ M +++ GG +++ R ++E L LDGF+ NIK++MATNR D
Sbjct: 242 PSIIFMDEIDSIGSTRVEGSGGGDSEVQ--RTMLEL-LNQLDGFETSKNIKIIMATNRLD 298
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
LDPAL+RPGR+DRK+EF P + R I +IH+R M++ R I +A +GA++
Sbjct: 299 ILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADV 358
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+ VCTEAGM+A+R RR +++DF AV KV
Sbjct: 359 KGVCTEAGMYALRERRIHVTQEDFELAVGKV 389
Score = 213 (80.0 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F +LGI PKGV+L+GPPGTGKTL ARAVA+ TD FIRV G+ELVQ
Sbjct: 161 KEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQ 220
Query: 169 KYVGE 173
KY+GE
Sbjct: 221 KYIGE 225
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 39/118 (33%), Positives = 67/118 (56%)
Query: 597 KVASEKDFLEAVNKVARCT-KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 655
KV KD L + + ++I S+ K ++ V+ K++VD+A + D++ R
Sbjct: 54 KVRFIKDELRLLQEPGSYVGEVIKIVSDK-KVLVKVQPEGKYIVDVAKDINVKDLKASQR 112
Query: 656 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + + Y +H L K DP V++M VE+ PD TY +GG +QI++++EV+E P+ H
Sbjct: 113 VCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKH 170
Score = 137 (53.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 436 DLTADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
DL A ++ +H L K DP V++M VE+ PD TY +GG +QI++++EV+E
Sbjct: 106 DLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIE 165
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 166 LPVKHPELFESLG 178
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 44/120 (36%), Positives = 58/120 (48%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + I+Q I P G +AR AVA+ TD FIRV G+ELVQKY+GEG+
Sbjct: 172 ELFESLGIAQPKGVILYGPPG--TGKTLLAR-AVAHHTDCKFIRVSGAELVQKYIGEGSR 228
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E I +EVQRTMLEL+NQ + F
Sbjct: 229 MVRELFVMAREHAPSII--FMDE----IDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGF 282
Score = 39 (18.8 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 187 VPNRMDRIVGGWTTEVNEYPWVVAL 211
VP+ +VGG T ++ E V+ L
Sbjct: 142 VPDSTYDMVGGLTKQIKEIKEVIEL 166
Score = 38 (18.4 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 323 VGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFE 358
+G RVE SG S+++ T + +++ Q GFE
Sbjct: 253 IGSTRVEGSGGGDSEVQRTMLELLN-----QLDGFE 283
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 309 (113.8 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 61/130 (46%), Positives = 84/130 (64%)
Query: 491 REVVETP---LLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRT 547
REV T L +DGFD RG++K++ ATNRPD LDPA++RPGR DR +E PD +GR
Sbjct: 288 REVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRL 347
Query: 548 HIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEA 607
I KIH R M++ D+ E +A++ GAE++++CTEAGM AIR R + DF +A
Sbjct: 348 EILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKA 407
Query: 608 VNKVARCTKI 617
V K+ K+
Sbjct: 408 VEKIMEKKKV 417
Score = 222 (83.2 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GIEPPKG+LL+GPPGTGKTL A+AVA T+A FIRV+GSELV+
Sbjct: 183 REVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVK 242
Query: 169 KYVGE 173
K++GE
Sbjct: 243 KFIGE 247
Score = 156 (60.0 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 37/106 (34%), Positives = 58/106 (54%)
Query: 608 VNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHI 667
V+KV K++ S P +++NV F V P D+ G RV +++ +
Sbjct: 98 VDKVGE-RKVVVKSSTGPSFLVNVSHF----------VNPDDLAPGKRVCLNQQTLTVVD 146
Query: 668 PLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
LP D M+V+E+P+V Y DIGG ++Q++++REVVE PL H
Sbjct: 147 VLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKH 192
Score = 144 (55.7 bits), Expect = 3.2e-37, Sum P(2) = 3.2e-37
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 436 DLTADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
DL K+ N+Q L + LP D M+V+E+P+V Y DIGG ++Q++++REVVE
Sbjct: 128 DLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVE 187
Query: 496 TPLLHLDGFDPRG 508
PL H + F+ G
Sbjct: 188 LPLKHPELFEKVG 200
Score = 108 (43.1 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA T+A FIRV+GSELV+K++GEGA + + ++ ++ E
Sbjct: 217 KTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSII--FIDE--- 271
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I EVQRT+++L+ + + F
Sbjct: 272 -IDAIAAKRTDALTGGDREVQRTLMQLLAEMDGF 304
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 313 (115.2 bits), Expect = 3.4e-45, Sum P(2) = 3.4e-45
Identities = 70/157 (44%), Positives = 99/157 (63%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
+ +P + + D IGG + E RE+ T LL+ +DGFD +K++MATNRPD
Sbjct: 224 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPD 283
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+ LP+ + R I KIHA ++ +I +E + +L GA++
Sbjct: 284 TLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADL 343
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
+VCTEAGMFAIRA ++DF++AV KVA K+
Sbjct: 344 GNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
Score = 196 (74.1 bits), Expect = 3.4e-45, Sum P(2) = 3.4e-45
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI PPKG LL+GPPGTGKTL ARAVA++ D F++V+ S +V
Sbjct: 146 REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVD 205
Query: 169 KYVGE--RVLMEGCN 181
KY+GE R++ E N
Sbjct: 206 KYIGESARLIREMFN 220
Score = 157 (60.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
SE D L+A+ V + + K+I+ ++VV + + ++ G RV +D
Sbjct: 43 SEND-LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 389 LLKSYGQGQYT-KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQ-- 445
L K Y + + K++++V + V+K++ E I ++ G DK L+
Sbjct: 36 LTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG 95
Query: 446 -----NEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ L I LP ++DP V M E+ +V+YS+IGG EQI +LREV+E PL +
Sbjct: 96 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 155
Query: 501 LDGFDPRGNI 510
+ F G I
Sbjct: 156 PELFQRVGII 165
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 317 (116.6 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 67/131 (51%), Positives = 88/131 (67%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E R ++E L LDGF+ NIKV+MATNR D LD AL+RPGR+DRK+EF
Sbjct: 255 GGSGGDSEVQRTMLEL-LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 313
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
P+ E R I KIH+R M++ R I +A L P ++GAE++ VCTEAGM+A+R RR +
Sbjct: 314 PNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVT 373
Query: 601 EKDFLEAVNKV 611
++DF AV KV
Sbjct: 374 QEDFEMAVAKV 384
Score = 215 (80.7 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 44/69 (63%), Positives = 52/69 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 157 KEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 216
Query: 169 KYVGERVLM 177
K++GE M
Sbjct: 217 KFIGEGARM 225
Score = 186 (70.5 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ A + K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP
Sbjct: 70 EVVRA-MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 128
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V++M VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 129 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKH 166
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 377 SCQVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWD 436
+ +V L ++ LL+ QG Y + D + ++K E + + D + + D
Sbjct: 48 NAKVRLLREELQLLQE--QGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNID---IND 102
Query: 437 LTAD-KQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+T + + L+N+ +H LP K+DP V++M VE+ PD TY IGG +QI++++EV+E
Sbjct: 103 VTPNCRVALRNDS-YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 161
Query: 496 TPLLHLDGFDPRG 508
P+ H + F+ G
Sbjct: 162 LPVKHPEHFEALG 174
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 36/94 (38%), Positives = 47/94 (50%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVA+ TD FIRV GSELVQK++GEGA R R ++ ++ E
Sbjct: 191 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII--FMDE--- 245
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
+EVQRTMLEL+NQ + F
Sbjct: 246 --IDSIGSRLEGGSGGDSEVQRTMLELLNQLDGF 277
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 307 (113.1 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 71/157 (45%), Positives = 95/157 (60%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
E +P V + D IGG + E RE+ T LL+ +DGFD G K++MATNRPD
Sbjct: 223 EHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPD 282
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRK+E LP+ GR I KIH +S + +I +E L +L + GA++
Sbjct: 283 TLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADL 342
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+V TEAG AI+ R + D + A KVA K+
Sbjct: 343 RNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKL 379
Score = 196 (74.1 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 39/72 (54%), Positives = 53/72 (73%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F+ +GI+PPKGVLL+GPPGTGKTL ARAVA F++V+ S +V
Sbjct: 145 REVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVD 204
Query: 169 KYVGE--RVLME 178
KY+GE R++ E
Sbjct: 205 KYIGESARIIRE 216
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 32/116 (27%), Positives = 65/116 (56%)
Query: 596 RKVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 655
+K +D ++++ V + + ++ ++I+ ++VV ++V + + +G+R
Sbjct: 37 KKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVR 96
Query: 656 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
V +D I LP ++DP V M +E+ D++++ +GG EQI +LREV+E PL
Sbjct: 97 VSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPL 152
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 298 (110.0 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 67/152 (44%), Positives = 93/152 (61%)
Query: 462 PTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDT 521
P++ M + + G E R ++E L LDGF+ IKVLMATNR D
Sbjct: 255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLEL-LNQLDGFEASNKIKVLMATNRIDI 313
Query: 522 LDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 581
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I + +A ++GAE++
Sbjct: 314 LDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 373
Query: 582 SVCTEAGMFAIRARRKVASEKDFLEAVNKVAR 613
+VCTEAGMFA+R RR +++DF AV KV +
Sbjct: 374 AVCTEAGMFALRERRVHVTQEDFEMAVAKVMK 405
Score = 221 (82.9 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 45/65 (69%), Positives = 52/65 (80%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL I PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 174 KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 233
Query: 169 KYVGE 173
KY+GE
Sbjct: 234 KYIGE 238
Score = 194 (73.4 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 37/98 (37%), Positives = 61/98 (62%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ +N K ++ V K+VVD+ S+ T I RV + + Y +H+ LP K+DP
Sbjct: 87 EVVKVMGKN-KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDP 145
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V +M+VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 146 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKH 183
Score = 150 (57.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDG 503
L+N+ + +H+ LP K+DP V +M+VE+ PD TY IGG +QI++++EV+E P+ H +
Sbjct: 128 LRNDSYV-LHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPEL 186
Query: 504 FDPRG 508
F+ G
Sbjct: 187 FESLG 191
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 43/120 (35%), Positives = 58/120 (48%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + I+Q + P G +AR AVA+ TD FIRV GSELVQKY+GEG+
Sbjct: 185 ELFESLGIAQPKGVLLYGPPG--TGKTLLAR-AVAHHTDCTFIRVSGSELVQKYIGEGSR 241
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E + +EVQRTMLEL+NQ + F
Sbjct: 242 MVRELFVMAREHAPSII--FMDE---IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF 296
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 298 (110.0 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 67/152 (44%), Positives = 93/152 (61%)
Query: 462 PTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDT 521
P++ M + + G E R ++E L LDGF+ IKVLMATNR D
Sbjct: 255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLEL-LNQLDGFEASNKIKVLMATNRIDI 313
Query: 522 LDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 581
LD AL+RPGR+DRK+EF P+ E R I KIH+R M++ R I + +A ++GAE++
Sbjct: 314 LDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 373
Query: 582 SVCTEAGMFAIRARRKVASEKDFLEAVNKVAR 613
+VCTEAGMFA+R RR +++DF AV KV +
Sbjct: 374 AVCTEAGMFALRERRVHVTQEDFEMAVAKVMK 405
Score = 221 (82.9 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 45/65 (69%), Positives = 52/65 (80%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL I PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 174 KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 233
Query: 169 KYVGE 173
KY+GE
Sbjct: 234 KYIGE 238
Score = 192 (72.6 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+++ +N K ++ V K+VVD+ S+ T + RV + + Y +H+ LP K+DP
Sbjct: 87 EVVKVMGKN-KVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDP 145
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V +M+VE+ PD TY IGG +QI++++EV+E P+ H
Sbjct: 146 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKH 183
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 39/130 (30%), Positives = 70/130 (53%)
Query: 379 QVTLDEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLT 438
+V + ++ LL+ G Y + V + ++K E + + D + L T
Sbjct: 67 RVRMLREELQLLQE--PGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPST 124
Query: 439 ADKQTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 498
+ L+N+ + +H+ LP K+DP V +M+VE+ PD TY IGG +QI++++EV+E P+
Sbjct: 125 --RVALRNDSYV-LHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 181
Query: 499 LHLDGFDPRG 508
H + F+ G
Sbjct: 182 KHPELFESLG 191
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 43/120 (35%), Positives = 58/120 (48%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
EL + I+Q + P G +AR AVA+ TD FIRV GSELVQKY+GEG+
Sbjct: 185 ELFESLGIAQPKGVLLYGPPG--TGKTLLAR-AVAHHTDCTFIRVSGSELVQKYIGEGSR 241
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E + +EVQRTMLEL+NQ + F
Sbjct: 242 MVRELFVMAREHAPSII--FMDE---IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF 296
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 315 (115.9 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 72/157 (45%), Positives = 96/157 (61%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
E +P + + D IGG + E RE+ T LL+ +DGFD G K++MATNRPD
Sbjct: 263 EHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPD 322
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+R GRLDRK+E GLP+ GR IFKIH ++ + + FE ++ GA+I
Sbjct: 323 TLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADI 382
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+V TEAG FAIR R + D ++AV KVA K+
Sbjct: 383 RNVVTEAGFFAIRDDRDYILQNDLMKAVRKVADVKKL 419
Score = 179 (68.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 39/72 (54%), Positives = 50/72 (69%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI+PPKGVLL+GPPGTGKTL A+AVA A FI S +V
Sbjct: 185 REVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVD 244
Query: 169 KYVGE--RVLME 178
KY+GE R++ E
Sbjct: 245 KYIGESARLIRE 256
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 32/112 (28%), Positives = 62/112 (55%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
+E D ++A+ V + + ++ +YI+ +++V +++ +++ G+RV +D
Sbjct: 82 TEND-IKALQSVGQIIGEVLKQLDDERYIVKTSSGPRYIVGCRNTIKKENLKNGVRVSLD 140
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP ++DP V M E +++++ IGG EQI +LREV+E PL
Sbjct: 141 MTTLTIMRILPREVDPLVYNMTTFEPGEISFNGIGGLTEQIRELREVIELPL 192
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 301 (111.0 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 69/152 (45%), Positives = 95/152 (62%)
Query: 462 PTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDT 521
P++ M +E + I G E R ++E L LDGF+ NIKV+M TNR D
Sbjct: 273 PSIIFM--DEIDSIGSQRIEGEHGDSEVQRTMMEL-LNQLDGFESTQNIKVIMCTNRIDI 329
Query: 522 LDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 581
LD AL+RPGR+DRK+EF P++E R I KIH+R M++ R I +A N +GAE++
Sbjct: 330 LDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVK 389
Query: 582 SVCTEAGMFAIRARRKVASEKDFLEAVNKVAR 613
+VCTEAGMFA+R RR +++DF AV KV +
Sbjct: 390 AVCTEAGMFALRERRVHVTQEDFEMAVAKVMK 421
Score = 220 (82.5 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 44/65 (67%), Positives = 52/65 (80%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 192 KEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 251
Query: 169 KYVGE 173
KY+GE
Sbjct: 252 KYIGE 256
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 43/130 (33%), Positives = 76/130 (58%)
Query: 586 EAGMFAIRAR-RKVASEKDFL-EAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLAD 643
EA + AR R++ E +L EA + V +I+ +N K ++ + K+VVD+A
Sbjct: 76 EAQRNELNARVRELCDEIQYLLEAASYVG---EIVKPMGKN-KVLVKINPEGKYVVDIAR 131
Query: 644 SVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKL 703
+ + RV + + Y++H LP K+DP V++M+VE+ PD TY +GG +Q++++
Sbjct: 132 HINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEV 191
Query: 704 REVVETPLLH 713
+EV+E P+ H
Sbjct: 192 KEVIELPVKH 201
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 26/65 (40%), Positives = 45/65 (69%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDG 503
L N+ ++H LP K+DP V++M+VE+ PD TY +GG +Q+++++EV+E P+ H +
Sbjct: 146 LYNDS-YKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEI 204
Query: 504 FDPRG 508
F+ G
Sbjct: 205 FESLG 209
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 42/120 (35%), Positives = 57/120 (47%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
E+ + ISQ + P G +AR AVA+ TD FIRV GSELVQKY+GEG+
Sbjct: 203 EIFESLGISQPKGVLLYGPPG--TGKTLLAR-AVAHHTDCTFIRVSGSELVQKYIGEGSR 259
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E +EVQRTM+EL+NQ + F
Sbjct: 260 MVRELFVMAREHAPSII--FMDE-----IDSIGSQRIEGEHGDSEVQRTMMELLNQLDGF 312
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 301 (111.0 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 69/152 (45%), Positives = 95/152 (62%)
Query: 462 PTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDT 521
P++ M +E + I G E R ++E L LDGF+ NIKV+M TNR D
Sbjct: 273 PSIIFM--DEIDSIGSQRIEGEHGDSEVQRTMMEL-LNQLDGFESTQNIKVIMCTNRIDI 329
Query: 522 LDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 581
LD AL+RPGR+DRK+EF P++E R I KIH+R M++ R I +A N +GAE++
Sbjct: 330 LDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVK 389
Query: 582 SVCTEAGMFAIRARRKVASEKDFLEAVNKVAR 613
+VCTEAGMFA+R RR +++DF AV KV +
Sbjct: 390 AVCTEAGMFALRERRVHVTQEDFEMAVAKVMK 421
Score = 220 (82.5 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 44/65 (67%), Positives = 52/65 (80%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ ++EL + PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQ
Sbjct: 192 KEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 251
Query: 169 KYVGE 173
KY+GE
Sbjct: 252 KYIGE 256
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 43/130 (33%), Positives = 76/130 (58%)
Query: 586 EAGMFAIRAR-RKVASEKDFL-EAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLAD 643
EA + AR R++ E +L EA + V +I+ +N K ++ + K+VVD+A
Sbjct: 76 EAQRNELNARVRELCDEIQYLLEAASYVG---EIVKPMGKN-KVLVKINPEGKYVVDIAR 131
Query: 644 SVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKL 703
+ + RV + + Y++H LP K+DP V++M+VE+ PD TY +GG +Q++++
Sbjct: 132 HINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEV 191
Query: 704 REVVETPLLH 713
+EV+E P+ H
Sbjct: 192 KEVIELPVKH 201
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 26/65 (40%), Positives = 45/65 (69%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDG 503
L N+ ++H LP K+DP V++M+VE+ PD TY +GG +Q+++++EV+E P+ H +
Sbjct: 146 LYNDS-YKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEI 204
Query: 504 FDPRG 508
F+ G
Sbjct: 205 FESLG 209
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 42/120 (35%), Positives = 57/120 (47%)
Query: 3 ELINQIHISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAV 62
E+ + ISQ + P G +AR AVA+ TD FIRV GSELVQKY+GEG+
Sbjct: 203 EIFESLGISQPKGVLLYGPPG--TGKTLLAR-AVAHHTDCTFIRVSGSELVQKYIGEGSR 259
Query: 63 ANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
R R ++ ++ E +EVQRTM+EL+NQ + F
Sbjct: 260 MVRELFVMAREHAPSII--FMDE-----IDSIGSQRIEGEHGDSEVQRTMMELLNQLDGF 312
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 294 (108.6 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 201 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 260
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 261 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 320
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 321 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 377
Score = 199 (75.1 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 52/166 (31%), Positives = 77/166 (46%)
Query: 9 HISQTFNNISVKPLDIFNGHKNIARGAVANRTDACFIRVIGSELVQKYV-GEGAVANRTD 67
H Q I PL I+ K G + F+ VIG +K G+ N+
Sbjct: 50 HFCQEGEGIG-SPL-IYTSRKKEENGLELTNSQTYFLPVIGLVDAEKLKPGDLVGVNKDS 107
Query: 68 ACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLGI 127
+ + +E + E+ ++ +N EKF NLGI
Sbjct: 108 YLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGI 167
Query: 128 EPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 168 QPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 213
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 623 ENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 682
EN + N + + V+ L D+ ++ G VGV+++ Y I LP + D V M+V
Sbjct: 71 ENGLELTNSQTYFLPVIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV 127
Query: 683 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
+E+P YSDIGG +QI++L E + P+ H
Sbjct: 128 DERPTEQYSDIGGLDKQIQELVEAIVLPMNH 158
Score = 46 (21.3 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 293 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 339
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 310 (114.2 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 62/153 (40%), Positives = 98/153 (64%)
Query: 460 IDPTVTMM-QVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNR 518
+ P++ + +++ Y G + +I+ R ++E L LDGFD RG++KV++ATNR
Sbjct: 280 LSPSIVFIDEIDAVGTKRYDAHSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVILATNR 336
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGA 578
++LDPAL+RPGR+DRK+EF LPD++ R IF+IH M++ D+ E +GA
Sbjct: 337 IESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGA 396
Query: 579 EIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+I+++CTEAG+ A+R RR + DF +A KV
Sbjct: 397 DIKAICTEAGLLALRERRMKVTHPDFKKAKEKV 429
Score = 207 (77.9 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 38/62 (61%), Positives = 52/62 (83%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + PE + ++GI+PPKGV+L+G PGTGKTL A+AVAN T A F+RV+GSEL+QKY+
Sbjct: 204 VELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYL 263
Query: 172 GE 173
G+
Sbjct: 264 GD 265
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 40/121 (33%), Positives = 58/121 (47%)
Query: 12 QTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANR 65
+ + +I +KP I G K + AVAN T A F+RV+GSEL+QKY+G+G R
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 271
Query: 66 TDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNL 125
+ +V ++ E I E+QRTMLEL+NQ + F +
Sbjct: 272 ELFRVADDLSPSIV--FIDE----IDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSR 325
Query: 126 G 126
G
Sbjct: 326 G 326
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 636 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGG 695
++ V + V +E G + + + L ++DP V++M+VE+ P +Y+DIGG
Sbjct: 133 EYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGG 192
Query: 696 CKEQIEKLREVVETPLLH 713
+ QI++++E VE PL H
Sbjct: 193 LEAQIQEIKEAVELPLTH 210
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDG 503
L + + L + L ++DP V++M+VE+ P +Y+DIGG + QI++++E VE PL H +
Sbjct: 154 LMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPEL 213
Query: 504 FDPRG 508
++ G
Sbjct: 214 YEDIG 218
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 308 (113.5 bits), Expect = 5.0e-43, Sum P(2) = 5.0e-43
Identities = 62/153 (40%), Positives = 98/153 (64%)
Query: 460 IDPTVTMM-QVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNR 518
+ P++ + +++ Y G + +I+ R ++E L LDGFD RG++KV++ATNR
Sbjct: 280 LSPSIVFIDEIDAVGTKRYDANSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVILATNR 336
Query: 519 PDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGA 578
++LDPAL+RPGR+DRK+EF LPD++ R IF+IH M++ D+ E +GA
Sbjct: 337 IESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGA 396
Query: 579 EIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+I+++CTEAG+ A+R RR + DF +A KV
Sbjct: 397 DIKAICTEAGLLALRERRMKVTHVDFKKAKEKV 429
Score = 207 (77.9 bits), Expect = 5.0e-43, Sum P(2) = 5.0e-43
Identities = 38/62 (61%), Positives = 52/62 (83%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + PE + ++GI+PPKGV+L+G PGTGKTL A+AVAN T A F+RV+GSEL+QKY+
Sbjct: 204 VELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYL 263
Query: 172 GE 173
G+
Sbjct: 264 GD 265
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 40/121 (33%), Positives = 58/121 (47%)
Query: 12 QTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANR 65
+ + +I +KP I G K + AVAN T A F+RV+GSEL+QKY+G+G R
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 271
Query: 66 TDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNL 125
+ +V ++ E I E+QRTMLEL+NQ + F +
Sbjct: 272 ELFRVADDLSPSIV--FIDE----IDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSR 325
Query: 126 G 126
G
Sbjct: 326 G 326
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 636 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGG 695
++ V + V +E G + + + L ++DP V++M+VE+ P +Y+DIGG
Sbjct: 133 EYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGG 192
Query: 696 CKEQIEKLREVVETPLLH 713
+ QI++++E VE PL H
Sbjct: 193 LEAQIQEIKEAVELPLTH 210
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDG 503
L + + L + L ++DP V++M+VE+ P +Y+DIGG + QI++++E VE PL H +
Sbjct: 154 LMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPEL 213
Query: 504 FDPRG 508
++ G
Sbjct: 214 YEDIG 218
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 294 (108.6 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 197 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 256
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 257 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 316
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 317 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 373
Score = 195 (73.7 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 152 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 209
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 38/106 (35%), Positives = 58/106 (54%)
Query: 608 VNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHI 667
+ +ARC + DSE Y + V +VD A+ + P D+ VGV+++ Y I
Sbjct: 63 IGDMARCQTVY--DSET--YFLPVIG----LVD-AEKLKPGDL-----VGVNKDSYLILE 108
Query: 668 PLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
LP + D V M+V+E+P YSDIGG +QI++L E + P+ H
Sbjct: 109 TLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNH 154
Score = 46 (21.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 289 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 335
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 294 (108.6 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 209 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 268
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 269 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 328
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 329 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 385
Score = 195 (73.7 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 164 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 221
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 41/140 (29%), Positives = 67/140 (47%)
Query: 577 GAEIRSVCTEAGMFAIRARRKVASEKDFLEA-VNKVARCTKIINADSENPKYIINVKQFA 635
G E+ + TE I+ R + SE L+ N I+ DS+ +K
Sbjct: 30 GEEVLKMSTEE---IIQRTRLLDSEIKLLDVDPNDQEEDGANIDLDSQRKGKCAVIKTST 86
Query: 636 K--FVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDI 693
+ + + + V ++ G VGV+++ Y I LP + D V M+V+E+P YSDI
Sbjct: 87 RQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDI 146
Query: 694 GGCKEQIEKLREVVETPLLH 713
GG +QI++L E + P+ H
Sbjct: 147 GGLDKQIQELVEAIVLPMNH 166
Score = 46 (21.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 301 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 347
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 297 (109.6 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 60/135 (44%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 293 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 349
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 350 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 409
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 410 MKVTNEDFKKSKENV 424
Score = 221 (82.9 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 190 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 249
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 250 GSELIQKYLGD 260
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 230 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 284
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 285 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 321
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 120 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 179
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 180 ETYADIGGLDNQIQEIKESVELPLTH 205
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 166 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 213
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 297 (109.6 bits), Expect = 5.6e-43, Sum P(2) = 5.6e-43
Identities = 60/135 (44%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 294 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 350
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 351 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 410
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 411 MKVTNEDFKKSKENV 425
Score = 221 (82.9 bits), Expect = 5.6e-43, Sum P(2) = 5.6e-43
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 191 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 250
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 251 GSELIQKYLGD 261
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 231 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 285
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 286 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 322
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 121 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 180
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 181 ETYADIGGLDNQIQEIKESVELPLTH 206
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 167 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 214
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 296 (109.3 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 60/135 (44%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 295 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 412 MKVTNEDFKKSKENV 426
Score = 221 (82.9 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 192 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 251
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 252 GSELIQKYLGD 262
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 286
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 287 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 323
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTH 207
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 168 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 296 (109.3 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 60/135 (44%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 295 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 412 MKVTNEDFKKSKENV 426
Score = 221 (82.9 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 192 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 251
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 252 GSELIQKYLGD 262
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 286
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 287 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 323
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTH 207
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 168 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 296 (109.3 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 60/135 (44%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 295 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 412 MKVTNEDFKKSKENV 426
Score = 221 (82.9 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 192 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 251
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 252 GSELIQKYLGD 262
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 286
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 287 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 323
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTH 207
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 168 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 296 (109.3 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 60/135 (44%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 295 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 412 MKVTNEDFKKSKENV 426
Score = 221 (82.9 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 192 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 251
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 252 GSELIQKYLGD 262
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 286
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 287 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 323
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTH 207
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 168 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 296 (109.3 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 60/135 (44%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 295 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 412 MKVTNEDFKKSKENV 426
Score = 221 (82.9 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 192 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 251
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 252 GSELIQKYLGD 262
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 286
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 287 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 323
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTH 207
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 168 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 296 (109.3 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 60/135 (44%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 295 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 412 MKVTNEDFKKSKENV 426
Score = 221 (82.9 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 192 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 251
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 252 GSELIQKYLGD 262
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 286
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 287 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 323
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTH 207
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 168 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
>FB|FBgn0042098 [details] [associations]
symbol:CG18735 species:7227 "Drosophila melanogaster"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS]
[GO:0006508 "proteolysis" evidence=IEA;NAS] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114
Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135
PROSITE:PS50240 SMART:SM00020 EMBL:AE013599 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HSSP:P00760
GeneTree:ENSGT00700000104440 EMBL:BT125606 RefSeq:NP_652645.1
UniGene:Dm.27776 SMR:Q9I7V4 IntAct:Q9I7V4 MINT:MINT-847316
MEROPS:S01.B38 EnsemblMetazoa:FBtr0071744 GeneID:59137
KEGG:dme:Dmel_CG18735 UCSC:CG18735-RA FlyBase:FBgn0042098
InParanoid:Q9I7V4 OMA:QETEVHE OrthoDB:EOG4ZPC9Q GenomeRNAi:59137
NextBio:841497 Uniprot:Q9I7V4
Length = 364
Score = 456 (165.6 bits), Expect = 8.3e-43, P = 8.3e-43
Identities = 92/202 (45%), Positives = 126/202 (62%)
Query: 180 CNNEGCGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSS 239
C CG N RIVGG TEV+EYPW++ L G F+CG +L++D+Y LTAAHCV
Sbjct: 69 CAECSCGNINTRHRIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCVNGF 128
Query: 240 KRQKDLIVV-ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLE 298
+ LI V + EHNR + +I RRV +VL HPKY+ ++ D DIAL++ + P+
Sbjct: 129 YHR--LITVRLLEHNRQDSH-VKIVDRRVSRVLIHPKYST---RNFDSDIALIRFNEPVR 182
Query: 299 FKPTVSPVCLPQLGEKFTQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFE 358
+ PVC+P E + +T V GWG + E G I+ L+ +VP++S +ECR E
Sbjct: 183 LGIDMHPVCMPTPSENYAGQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECRNSNYGE 242
Query: 359 AKLTGNMMCAGYVE-GGKDSCQ 379
+K+T NM+CAGYVE GGKDSCQ
Sbjct: 243 SKITDNMICAGYVEQGGKDSCQ 264
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 295 (108.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 59/128 (46%), Positives = 88/128 (68%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 295 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 597 KVASEKDF 604
+ +DF
Sbjct: 412 MKVTNEDF 419
Score = 221 (82.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+
Sbjct: 192 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 251
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 252 GSELIQKYLGD 262
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 36/98 (36%), Positives = 50/98 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVAN+T A F+RV+GSEL+QKY+G+G R G +V ++ E
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIV--FIDE--- 286
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 287 -IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 323
Score = 123 (48.4 bits), Expect = 0.00030, P = 0.00030
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M++E+ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQ 181
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTH 207
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M++E+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 168 DPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 297 (109.6 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 61/151 (40%), Positives = 96/151 (63%)
Query: 462 PTVTMM-QVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ + +++ Y G + +I+ R ++E L LDGFD RG++KV+MATNR +
Sbjct: 278 PSIVFIDEIDAVGTKRYDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIE 334
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGR+DRK+EF LPD + + IF IH M++ D+ L + +GA+I
Sbjct: 335 TLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADI 394
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+++CTEAG+ A+R RR + +DF ++ V
Sbjct: 395 KAICTEAGLMALRERRMKVTNEDFKKSKESV 425
Score = 217 (81.4 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 38/67 (56%), Positives = 55/67 (82%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E++ ++ + PE + +GI+PPKGV+L+GPPGTGKTL A+AVAN+T A F+RV+GSEL
Sbjct: 195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 254
Query: 167 VQKYVGE 173
+QKY+G+
Sbjct: 255 IQKYLGD 261
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M++E+ P
Sbjct: 121 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQ 180
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 181 ETYADIGGLDTQIQEIKESVELPLTH 206
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 231 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 285
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 286 --IDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 322
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M++E+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 167 DPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMG 214
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 300 (110.7 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 61/135 (45%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 295 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M+V D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 352 EFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERR 411
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 412 MKVTNEDFKKSKENV 426
Score = 213 (80.0 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 40/71 (56%), Positives = 57/71 (80%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + +EL + PE + +GI+PPKGV+L+G PGTGKTL A+AVAN+T A F+RV+
Sbjct: 192 NQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVV 251
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 252 GSELIQKYLGD 262
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 286
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 287 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 323
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTH 207
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 168 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 300 (110.7 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 61/151 (40%), Positives = 97/151 (64%)
Query: 462 PTVTMM-QVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ + +++ Y G + +I+ R ++E L LDGFD R ++KV+MATNR +
Sbjct: 278 PSIVFIDEIDAVGTKRYDSQSGGEREIQ--RTMLEL-LNQLDGFDARTDVKVIMATNRIE 334
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGR+DRK+EF LPD++ + IF+IH M++ D+ E + +GA+I
Sbjct: 335 TLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADI 394
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+++CTE+G+ A+R RR + DF +A KV
Sbjct: 395 KAICTESGLLALRERRMRVTHTDFKKAKEKV 425
Score = 209 (78.6 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 38/62 (61%), Positives = 52/62 (83%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + PE + +GI+PPKGV+L+G PGTGKTL A+AVAN+T A F+RV+GSEL+QKY+
Sbjct: 200 IELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 259
Query: 172 GE 173
G+
Sbjct: 260 GD 261
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 41/117 (35%), Positives = 54/117 (46%)
Query: 12 QTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANR 65
+ + I +KP I G K + AVAN+T A F+RV+GSEL+QKY+G+G R
Sbjct: 208 ELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 267
Query: 66 TDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
RV E V I E+QRTMLEL+NQ + F
Sbjct: 268 E---LFRV-ADECAPSIVFIDE--IDAVGTKRYDSQSGGEREIQRTMLELLNQLDGF 318
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDG 503
L N + L + + ++DP V +M+VE+ P +YSDIGG + Q+++++E +E PL H +
Sbjct: 150 LLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPEL 209
Query: 504 FDPRG 508
++ G
Sbjct: 210 YEEIG 214
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 298 (110.0 bits), Expect = 7.9e-42, Sum P(2) = 7.9e-42
Identities = 61/135 (45%), Positives = 91/135 (67%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR +TLDPAL+RPGR+DRK+
Sbjct: 295 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
EF LPD + + IF+IH M+V D+ + L + +GA+I+++CTEAG+ A+R RR
Sbjct: 352 EFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERR 411
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 412 MKVTNEDFKKSKENV 426
Score = 209 (78.6 bits), Expect = 7.9e-42, Sum P(2) = 7.9e-42
Identities = 37/67 (55%), Positives = 54/67 (80%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E++ ++ + PE + +GI+PPKGV+L+G PGTGKTL A+AVAN+T A F+RV+GSEL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 167 VQKYVGE 173
+QKY+G+
Sbjct: 256 IQKYLGD 262
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+RV+GSEL+QKY+G+G R RV ++ E
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE---LFRVAEEHAPSIVFIDE-- 286
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 287 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 323
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V + V +E G V ++ + + L DP VT+M+VE+ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+DIGG QI++++E VE PL H
Sbjct: 182 ETYADIGGLDSQIQEIKESVELPLTH 207
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP VT+M+VE+ P TY+DIGG QI++++E VE PL H + ++ G
Sbjct: 168 DPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMG 215
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 291 (107.5 bits), Expect = 8.6e-41, Sum P(2) = 8.6e-41
Identities = 70/177 (39%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 216 LAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTM 275
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 276 LELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 335
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAG+ A+R + +D++E + +V
Sbjct: 336 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYMEGILEV 392
Score = 195 (73.7 bits), Expect = 8.6e-41, Sum P(2) = 8.6e-41
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 171 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 228
Score = 128 (50.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 101 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 157
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 158 KQIQELVEAIVLPMNH 173
Score = 46 (21.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 308 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 354
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 289 (106.8 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 59/137 (43%), Positives = 89/137 (64%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATN+ +TLDPAL+RPGR+DRK+
Sbjct: 292 YDSNSGGEREIQ--RTMLEL-LNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKI 348
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
F PDL + I IH M++ D+ E L + +GA+I+++CTEAG+ A+R RR
Sbjct: 349 LFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERR 408
Query: 597 KVASEKDFLEAVNKVAR 613
+ +DF +A +V +
Sbjct: 409 MQVTAEDFKQAKERVMK 425
Score = 208 (78.3 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 36/67 (53%), Positives = 54/67 (80%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E++ ++ + PE + +GI+PPKGV+L+G PGTGKTL A+AVAN+T A F+R++GSEL
Sbjct: 193 EIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL 252
Query: 167 VQKYVGE 173
+QKY+G+
Sbjct: 253 IQKYLGD 259
Score = 130 (50.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 35/99 (35%), Positives = 50/99 (50%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+R++GSEL+QKY+G+G R +V G ++ E
Sbjct: 229 KTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQ---IFKVAGENAPSIVFIDE-- 283
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 284 --IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRG 320
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 596 RKVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 655
+K EK LE + + ++ I+ + V + V +E G
Sbjct: 87 KKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCS 146
Query: 656 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + I L DP V++M++++ P +YSDIGG + QI++++E VE PL H
Sbjct: 147 VLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTH 204
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 280 (103.6 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 58/150 (38%), Positives = 94/150 (62%)
Query: 462 PTVTMM-QVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ + +++ Y G + +I+ R ++E L LDGFD RG++KV+MATNR D
Sbjct: 287 PSIVFIDEIDAVGTKRYEATSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRID 343
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
+LDPAL+RPGR+DRK++ PD + + IF+IH M++ D+ E +GA+I
Sbjct: 344 SLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADI 403
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNK 610
+++CTEAG+ A+R RR ++ D +A +K
Sbjct: 404 KAICTEAGLLALRERRMKITQADLRKARDK 433
Score = 216 (81.1 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 39/62 (62%), Positives = 53/62 (85%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + PE + ++GI+PPKGV+L+GPPGTGKTL A+AVAN T A F+RV+GSEL+QKY+
Sbjct: 209 VELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYL 268
Query: 172 GE 173
G+
Sbjct: 269 GD 270
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 33/96 (34%), Positives = 53/96 (55%)
Query: 618 INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 677
I A S P+Y +N+ F DL +E G V ++ + L ++DP V
Sbjct: 130 IIATSVGPEYYVNILSFVD--KDL--------LEPGCSVLLNNKTNSVVGILLDEVDPLV 179
Query: 678 TMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
++M+VE+ P +Y+DIGG + QI++++E VE PL H
Sbjct: 180 SVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTH 215
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 35/98 (35%), Positives = 48/98 (48%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVAN T A F+RV+GSEL+QKY+G+G R +V ++ E
Sbjct: 240 KTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIV--FIDE--- 294
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 295 -IDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRG 331
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 280 (103.6 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 58/150 (38%), Positives = 94/150 (62%)
Query: 462 PTVTMM-QVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ + +++ Y G + +I+ R ++E L LDGFD RG++KV+MATNR D
Sbjct: 287 PSIVFIDEIDAVGTKRYEATSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRID 343
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
+LDPAL+RPGR+DRK++ PD + + IF+IH M++ D+ E +GA+I
Sbjct: 344 SLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADI 403
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNK 610
+++CTEAG+ A+R RR ++ D +A +K
Sbjct: 404 KAICTEAGLLALRERRMKITQADLRKARDK 433
Score = 216 (81.1 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 39/62 (62%), Positives = 53/62 (85%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + PE + ++GI+PPKGV+L+GPPGTGKTL A+AVAN T A F+RV+GSEL+QKY+
Sbjct: 209 VELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYL 268
Query: 172 GE 173
G+
Sbjct: 269 GD 270
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 33/96 (34%), Positives = 53/96 (55%)
Query: 618 INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 677
I A S P+Y +N+ F DL +E G V ++ + L ++DP V
Sbjct: 130 IIATSVGPEYYVNILSFVD--KDL--------LEPGCSVLLNNKTNSVVGILLDEVDPLV 179
Query: 678 TMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
++M+VE+ P +Y+DIGG + QI++++E VE PL H
Sbjct: 180 SVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTH 215
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 35/98 (35%), Positives = 48/98 (48%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVAN T A F+RV+GSEL+QKY+G+G R +V ++ E
Sbjct: 240 KTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIV--FIDE--- 294
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 295 -IDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRG 331
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 289 (106.8 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 60/151 (39%), Positives = 97/151 (64%)
Query: 462 PTVTMM-QVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPD 520
P++ + +++ Y G + +I+ R ++E L LDGFD RG++KVLMATNR +
Sbjct: 282 PSIVFIDEIDAVGTKRYDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVLMATNRIE 338
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
+LDPAL+RPGR+DRK+EF LPD + + IF+IH M++ +++ E +GA+I
Sbjct: 339 SLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADI 398
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+++CTEAG+ A+R RR + +DF ++ V
Sbjct: 399 KAMCTEAGLLALRERRMRVTMEDFQKSKENV 429
Score = 204 (76.9 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 37/62 (59%), Positives = 51/62 (82%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + PE + +GI PPKGV+L+G PGTGKTL A+AVAN+T A F+R++GSEL+QKY+
Sbjct: 204 VELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYL 263
Query: 172 GE 173
G+
Sbjct: 264 GD 265
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 26/86 (30%), Positives = 49/86 (56%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ ++ V++ V +E G V ++ + + L DP V++M++E+ P
Sbjct: 125 IVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQ 184
Query: 688 VTYSDIGGCKEQIEKLREVVETPLLH 713
TY+D+GG +QI++++E VE PL H
Sbjct: 185 ETYADVGGLDQQIQEIKEAVELPLTH 210
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 35/99 (35%), Positives = 49/99 (49%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQ-KYVGEGA 87
K + AVAN+T A F+R++GSEL+QKY+G+G R RV ++ E
Sbjct: 235 KTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRE---LFRVAEENAPSIVFIDE-- 289
Query: 88 RMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 290 --IDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 326
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 20/48 (41%), Positives = 35/48 (72%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
DP V++M++E+ P TY+D+GG +QI++++E VE PL H + ++ G
Sbjct: 171 DPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMG 218
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 292 (107.8 bits), Expect = 7.8e-40, Sum P(2) = 7.8e-40
Identities = 72/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 239 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 298
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 299 LELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 358
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ FE LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 359 RKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEV 415
Score = 195 (73.7 bits), Expect = 7.8e-40, Sum P(2) = 7.8e-40
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 194 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 251
Score = 128 (50.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 124 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 180
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 181 KQIQELVEAIVLPMNH 196
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 294 (108.6 bits), Expect = 7.8e-40, Sum P(2) = 7.8e-40
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 251 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 310
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 311 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 370
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 371 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 427
Score = 195 (73.7 bits), Expect = 7.8e-40, Sum P(2) = 7.8e-40
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 206 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 263
Score = 128 (50.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 136 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 192
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 193 KQIQELVEAIVLPMNH 208
Score = 46 (21.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 343 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 389
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 294 (108.6 bits), Expect = 7.8e-40, Sum P(2) = 7.8e-40
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 251 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 310
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 311 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 370
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 371 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 427
Score = 195 (73.7 bits), Expect = 7.8e-40, Sum P(2) = 7.8e-40
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 206 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 263
Score = 128 (50.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 136 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 192
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 193 KQIQELVEAIVLPMNH 208
Score = 46 (21.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 343 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 389
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 294 (108.6 bits), Expect = 7.8e-40, Sum P(2) = 7.8e-40
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 251 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 310
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 311 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 370
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 371 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 427
Score = 195 (73.7 bits), Expect = 7.8e-40, Sum P(2) = 7.8e-40
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 206 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 263
Score = 128 (50.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 136 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 192
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 193 KQIQELVEAIVLPMNH 208
Score = 46 (21.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 343 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 389
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 294 (108.6 bits), Expect = 9.0e-40, Sum P(2) = 9.0e-40
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 254 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 313
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 314 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 373
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 374 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 430
Score = 195 (73.7 bits), Expect = 9.0e-40, Sum P(2) = 9.0e-40
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 209 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 266
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 139 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 195
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 196 KQIQELVEAIVLPMNH 211
Score = 46 (21.3 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 346 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 392
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 294 (108.6 bits), Expect = 9.0e-40, Sum P(2) = 9.0e-40
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 254 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 313
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 314 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 373
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 374 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 430
Score = 195 (73.7 bits), Expect = 9.0e-40, Sum P(2) = 9.0e-40
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 209 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 266
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 139 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 195
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 196 KQIQELVEAIVLPMNH 211
Score = 46 (21.3 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 346 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 392
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 294 (108.6 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 258 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 317
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 318 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 377
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 378 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 434
Score = 195 (73.7 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 213 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 270
Score = 128 (50.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 143 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 199
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 200 KQIQELVEAIVLPMNH 215
Score = 46 (21.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 350 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCTD 396
Score = 39 (18.8 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 308 LPQLGEKFTQRTGTVVGWGRVEESG 332
LPQL T++ W E+ G
Sbjct: 11 LPQLESPVTRQEKMATVWDEAEQDG 35
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 305 (112.4 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 71/157 (45%), Positives = 91/157 (57%)
Query: 470 EEKPDVTYSD----IGGCK--EQIEKLREVVETP---LLHLDGFDPRGNIKVLMATNRPD 520
E +P + + D IGG + E RE+ T L +DGFD G K++MATNRPD
Sbjct: 272 EHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPD 331
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+RPGRLDRKVE LP+ GR IFKIH + + FE ++ GA+I
Sbjct: 332 TLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADI 391
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKI 617
R+ TEAG FAIR R + D ++AV KVA K+
Sbjct: 392 RNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKL 428
Score = 177 (67.4 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 39/72 (54%), Positives = 50/72 (69%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + PE F +GI+PPKGVLL+GPPGTGKTL A+AVA A FI S +V
Sbjct: 194 REVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVD 253
Query: 169 KYVGE--RVLME 178
KY+GE R++ E
Sbjct: 254 KYIGESARIIRE 265
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/112 (31%), Positives = 62/112 (55%)
Query: 600 SEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 659
+E D ++A+ + + + + KYI+ +++V + +SV + +++G+RV +D
Sbjct: 91 TEND-IKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLD 149
Query: 660 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
I LP + DP V M E+ ++T+ IGG EQI +LREV+E PL
Sbjct: 150 ITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPL 201
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 294 (108.6 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 71/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 268 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 327
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 328 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 387
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 388 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 444
Score = 195 (73.7 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 223 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 280
Score = 119 (46.9 bits), Expect = 0.00086, P = 0.00086
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 137 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 193
Query: 698 EQIEKLRE 705
+QI+++RE
Sbjct: 194 KQIQEVRE 201
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 293 (108.2 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 61/124 (49%), Positives = 81/124 (65%)
Query: 491 REVVET--PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRT 547
REV T LL+ LDGF +KV+ ATNRPDTLDPAL+R GRLDRK+E P+ E R
Sbjct: 304 REVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRA 363
Query: 548 HIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEA 607
I +IH+R M+V +D+ FE LAR + GA++++VC EAGM A+R +DF+E
Sbjct: 364 RILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEG 423
Query: 608 VNKV 611
+ V
Sbjct: 424 ITSV 427
Score = 187 (70.9 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 35/70 (50%), Positives = 54/70 (77%)
Query: 108 VQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 167
V+ +L ++++ EKF +GI+PPKGVL+ GPPGTGKTL ARA A++T+A F+++ G +LV
Sbjct: 199 VEAIVLPMLHK-EKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLV 257
Query: 168 QKYVGERVLM 177
Q ++G+ M
Sbjct: 258 QMFIGDGAKM 267
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 648 TDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVV 707
++++ G VGV+++ Y I LP + D V M+V EKP YSDIGG +QIE L E +
Sbjct: 143 SELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAI 202
Query: 708 ETPLLH 713
P+LH
Sbjct: 203 VLPMLH 208
Score = 102 (41.0 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
Identities = 33/125 (26%), Positives = 59/125 (47%)
Query: 4 LINQIHISQTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQKYV 57
++ +H + F I +KP + +G K + A A++T+A F+++ G +LVQ ++
Sbjct: 203 VLPMLH-KEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFI 261
Query: 58 GEGAVANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELIN 117
G+GA R + ++ ++ E + EVQRTMLEL+N
Sbjct: 262 GDGAKMVRDAFNLAKEKAPAII--FIDE----LDAIGTKRFDSELSGDREVQRTMLELLN 315
Query: 118 QPEKF 122
Q + F
Sbjct: 316 QLDGF 320
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 293 (108.2 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 61/124 (49%), Positives = 81/124 (65%)
Query: 491 REVVET--PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRT 547
REV T LL+ LDGF +KV+ ATNRPDTLDPAL+R GRLDRK+E P+ E R
Sbjct: 304 REVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRA 363
Query: 548 HIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEA 607
I +IH+R M+V +D+ FE LAR + GA++++VC EAGM A+R +DF+E
Sbjct: 364 RILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEG 423
Query: 608 VNKV 611
+ V
Sbjct: 424 ITSV 427
Score = 187 (70.9 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 35/70 (50%), Positives = 54/70 (77%)
Query: 108 VQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 167
V+ +L ++++ EKF +GI+PPKGVL+ GPPGTGKTL ARA A++T+A F+++ G +LV
Sbjct: 199 VEAIVLPMLHK-EKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLV 257
Query: 168 QKYVGERVLM 177
Q ++G+ M
Sbjct: 258 QMFIGDGAKM 267
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 648 TDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVV 707
++++ G VGV+++ Y I LP + D V M+V EKP YSDIGG +QIE L E +
Sbjct: 143 SELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAI 202
Query: 708 ETPLLH 713
P+LH
Sbjct: 203 VLPMLH 208
Score = 102 (41.0 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
Identities = 33/125 (26%), Positives = 59/125 (47%)
Query: 4 LINQIHISQTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQKYV 57
++ +H + F I +KP + +G K + A A++T+A F+++ G +LVQ ++
Sbjct: 203 VLPMLH-KEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFI 261
Query: 58 GEGAVANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELIN 117
G+GA R + ++ ++ E + EVQRTMLEL+N
Sbjct: 262 GDGAKMVRDAFNLAKEKAPAII--FIDE----LDAIGTKRFDSELSGDREVQRTMLELLN 315
Query: 118 QPEKF 122
Q + F
Sbjct: 316 QLDGF 320
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 286 (105.7 bits), Expect = 7.7e-39, Sum P(2) = 7.7e-39
Identities = 70/177 (39%), Positives = 101/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD---IGGCKE-QIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D G K EK REV T
Sbjct: 246 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDSEKAGDREVQRTM 305
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLD+K+EF +P+ E R I +IH+
Sbjct: 306 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEARARIMQIHS 365
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ +E LAR + GA+ ++VC EAGM A+R + +D++E + +V
Sbjct: 366 RKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTTELTHEDYMEGILEV 422
Score = 195 (73.7 bits), Expect = 7.7e-39, Sum P(2) = 7.7e-39
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 201 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 258
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 131 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 187
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 188 KQIQELVEAIVLPMNH 203
Score = 45 (20.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 664 QIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGCKE 698
+I P+P + + +MQ+ + PDV Y ++ C +
Sbjct: 346 KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARCMD 384
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 298 (110.0 bits), Expect = 7.8e-39, Sum P(2) = 7.8e-39
Identities = 62/127 (48%), Positives = 88/127 (69%)
Query: 485 EQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLE 544
EQ E R ++E L LDGF+ RG++K++MATNR D+LDPAL+RPGR+DRK+E PD +
Sbjct: 300 EQ-EVQRTLLEL-LNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEK 357
Query: 545 GRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDF 604
R IF IH M++++ + +E + + +GAEI++VCTEAGM A+RA+RK DF
Sbjct: 358 TRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDF 417
Query: 605 LEAVNKV 611
+AV V
Sbjct: 418 EKAVKSV 424
Score = 180 (68.4 bits), Expect = 7.8e-39, Sum P(2) = 7.8e-39
Identities = 37/62 (59%), Positives = 45/62 (72%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + PE + +GI PKGV+L+G PGTGKTL A+AVAN T A FIR GS+LVQK
Sbjct: 199 VELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQS 258
Query: 172 GE 173
GE
Sbjct: 259 GE 260
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 289 (106.8 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 72/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 242 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 301
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +IKV+ ATNR D LDPAL+R GRLDRK+E P+ + R I +IH+
Sbjct: 302 LELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHS 361
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V +D+ FE LAR + GA+ ++VC EAGM A+R +DF++A+ +V
Sbjct: 362 RKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEV 418
Score = 189 (71.6 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 33/66 (50%), Positives = 53/66 (80%)
Query: 108 VQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 167
++ +L + ++ ++FVNLGI PPKGVL++GPPGTGKT+ ARAVA +T + F+++ G +LV
Sbjct: 190 IEAVVLPMTHK-DRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLV 248
Query: 168 QKYVGE 173
Q ++G+
Sbjct: 249 QMFIGD 254
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 34/97 (35%), Positives = 56/97 (57%)
Query: 618 INADSENPKY-IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 676
++ D++ K +I A + + + V P +++ G VGV+++ Y I LP + D
Sbjct: 103 VDLDAQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSR 162
Query: 677 VTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V M+V+E+P YSDIGGC +QI++L E V P+ H
Sbjct: 163 VKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTH 199
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 456 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
LP + D V M+V+E+P YSDIGGC +QI++L E V P+ H D F
Sbjct: 155 LPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRF 203
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 289 (106.8 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 72/177 (40%), Positives = 102/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 242 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 301
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +IKV+ ATNR D LDPAL+R GRLDRK+E P+ + R I +IH+
Sbjct: 302 LELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHS 361
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V +D+ FE LAR + GA+ ++VC EAGM A+R +DF++A+ +V
Sbjct: 362 RKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEV 418
Score = 189 (71.6 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 33/66 (50%), Positives = 53/66 (80%)
Query: 108 VQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 167
++ +L + ++ ++FVNLGI PPKGVL++GPPGTGKT+ ARAVA +T + F+++ G +LV
Sbjct: 190 IEAVVLPMTHK-DRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLV 248
Query: 168 QKYVGE 173
Q ++G+
Sbjct: 249 QMFIGD 254
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 34/97 (35%), Positives = 56/97 (57%)
Query: 618 INADSENPKY-IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 676
++ D++ K +I A + + + V P +++ G VGV+++ Y I LP + D
Sbjct: 103 VDLDAQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSR 162
Query: 677 VTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V M+V+E+P YSDIGGC +QI++L E V P+ H
Sbjct: 163 VKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTH 199
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 456 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
LP + D V M+V+E+P YSDIGGC +QI++L E V P+ H D F
Sbjct: 155 LPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRF 203
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 274 (101.5 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 59/140 (42%), Positives = 87/140 (62%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATN+ +TLDPAL+RPGR+DRK+
Sbjct: 314 YDSTSGGEREIQ--RTMLEL-LNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKI 370
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
F PD + IF +H MS+ D+ + + +GA+IR++CTEAG+ A+R RR
Sbjct: 371 LFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERR 430
Query: 597 KVASEKDFLEAVNKVARCTK 616
DF A ++ + TK
Sbjct: 431 MRVQMDDFRAARERIMK-TK 449
Score = 208 (78.3 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 39/68 (57%), Positives = 57/68 (83%)
Query: 107 EVQRTM-LELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
EV+ ++ L L++ PE + +GI+PPKGV+L+G PGTGKTL A+AVAN+T A F+R++GSE
Sbjct: 215 EVRESVELPLLH-PELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSE 273
Query: 166 LVQKYVGE 173
L+QKY+G+
Sbjct: 274 LIQKYLGD 281
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVAN+T A F+R++GSEL+QKY+G+G R +V ++ E
Sbjct: 251 KTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIV--FIDE--- 305
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 306 -IDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDDRG 342
Score = 119 (46.9 bits), Expect = 0.00087, P = 0.00087
Identities = 22/53 (41%), Positives = 38/53 (71%)
Query: 456 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
L + DP V++M++++ P +Y+DIGG + QI+++RE VE PLLH + ++ G
Sbjct: 182 LTEESDPLVSVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMG 234
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 274 (101.5 bits), Expect = 2.7e-38, Sum P(2) = 2.7e-38
Identities = 57/137 (41%), Positives = 86/137 (62%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG+IKV+MATN+ ++LDPAL+RPGR+DRK+
Sbjct: 296 YESTSGGEREIQ--RTMLEL-LNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKI 352
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
F PD + I IH MS+ D+ + + + +GA+I+++CTEAG+ A+R RR
Sbjct: 353 LFENPDANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERR 412
Query: 597 KVASEKDFLEAVNKVAR 613
+DF A +V +
Sbjct: 413 MQVKAEDFKSAKERVLK 429
Score = 208 (78.3 bits), Expect = 2.7e-38, Sum P(2) = 2.7e-38
Identities = 36/67 (53%), Positives = 54/67 (80%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E++ ++ + PE + +GI+PPKGV+L+G PGTGKTL A+AVAN+T A F+R++GSEL
Sbjct: 197 EIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL 256
Query: 167 VQKYVGE 173
+QKY+G+
Sbjct: 257 IQKYLGD 263
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVAN+T A F+R++GSEL+QKY+G+G R +V ++ E
Sbjct: 233 KTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIV--FIDE--- 287
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
I E+QRTMLEL+NQ + F + G
Sbjct: 288 -IDAIGTKRYESTSGGEREIQRTMLELLNQLDGFDDRG 324
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 292 (107.8 bits), Expect = 3.9e-38, Sum P(2) = 3.9e-38
Identities = 65/142 (45%), Positives = 91/142 (64%)
Query: 478 SDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVE 537
S++ G +E ++ R ++E L LDGF NIKV+ ATNR D LDPAL+R GRLDRK+E
Sbjct: 280 SEVSGDRE-VQ--RTMLEL-LNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIE 335
Query: 538 FGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 597
F LP+ E R HI +IH+R M+V D+ F+ LAR + GA++++VC EAGM A+R
Sbjct: 336 FPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGT 395
Query: 598 VASEKDFLEA-VNKVARCTKII 618
DF+E V +A+ K +
Sbjct: 396 ELIHNDFVEGCVEVMAKKKKTL 417
Score = 177 (67.4 bits), Expect = 3.9e-38, Sum P(2) = 3.9e-38
Identities = 31/66 (46%), Positives = 53/66 (80%)
Query: 108 VQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 167
V+ +L + ++ E+F ++GI+PPKGVL++GPPGTGKTL ARA A +T++ ++++ G +LV
Sbjct: 181 VEAVVLPMTHK-ERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLV 239
Query: 168 QKYVGE 173
Q ++G+
Sbjct: 240 QMFIGD 245
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/154 (32%), Positives = 79/154 (51%)
Query: 569 ARLCPNSTGAEIRS--VCTEAGMFAIRARRKVASEKDFL--EAVNKVARCTKIINA--DS 622
A+L N T +RS + M +I+ R K ++K + + + VA +II+ D
Sbjct: 38 AKLLENETKV-LRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHLVANVVEIIDMVLDG 96
Query: 623 EN-PKYIINVKQFAKFVVDLA-DSVAPTD-IEEGMRVGVDRNKYQIHIPLPPKIDPTVTM 679
E P + VK + + LA + D + G VG++++ Y I LPP+ D V
Sbjct: 97 ETQPSKCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKA 156
Query: 680 MQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
M+++EKP YSDIGG +QI++L E V P+ H
Sbjct: 157 MEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTH 190
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 456 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
LPP+ D V M+++EKP YSDIGG +QI++L E V P+ H + F+ G
Sbjct: 146 LPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIG 198
Score = 99 (39.9 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 3 ELINQIHISQT----FNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSEL 52
EL+ + + T F +I +KP + G K + A A +T++ ++++ G +L
Sbjct: 179 ELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQL 238
Query: 53 VQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTM 112
VQ ++G+GA R + G ++ ++ E + EVQRTM
Sbjct: 239 VQMFIGDGAKLVRDAFALAKEKGPTII--FIDE----LDAIGTKRFDSEVSGDREVQRTM 292
Query: 113 LELINQPEKF 122
LEL+NQ + F
Sbjct: 293 LELLNQLDGF 302
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 267 (99.0 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 57/123 (46%), Positives = 79/123 (64%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 265 GADREVQRI--LMEL-LNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLP 321
Query: 542 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASE 601
D + IF++ M++ ++ E +GAEI+S+C EAGM AIR R V
Sbjct: 322 DRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILP 381
Query: 602 KDF 604
KDF
Sbjct: 382 KDF 384
Score = 200 (75.5 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + + +GI+PP+GVLL+GPPGTGKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 163 REAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQ 222
Query: 169 KYVGE 173
KY+GE
Sbjct: 223 KYLGE 227
Score = 130 (50.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQP--LQIHI--- 454
K I++V I +++ V+ TGI +S +G T D++ L+ LQ H
Sbjct: 65 KRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNAL 124
Query: 455 --PLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ ++ +EKP +YSDIGG Q +++RE VE PL H + G DP
Sbjct: 125 VDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPP 184
Query: 507 RG 508
RG
Sbjct: 185 RG 186
Score = 41 (19.5 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 645 VAPTDIEEGMRVGVDRNKYQIH 666
+ P D E+G + + +N ++ +
Sbjct: 379 ILPKDFEKGYKASIKKNTHEFN 400
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 282 (104.3 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 72/177 (40%), Positives = 100/177 (56%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCK--EQIEKLREVVET- 496
L Q +Q+ I K+ ++ E+ P + + D IG + ++ REV T
Sbjct: 235 LAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTM 294
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF IKV+ ATNR D LDPALMR GRLDRK+EF P E R I +IH+
Sbjct: 295 LELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHS 354
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ FE LAR + GA++++VC EAGM A+R + +DF E + +V
Sbjct: 355 RKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411
Score = 183 (69.5 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 35/66 (53%), Positives = 51/66 (77%)
Query: 108 VQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 167
V+ +L + ++ E+F LGI PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LV
Sbjct: 183 VEAIVLPMTHK-EQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 241
Query: 168 QKYVGE 173
Q ++G+
Sbjct: 242 QMFIGD 247
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
VV L D P ++ G VGV+++ Y I LP + D V M+V+EKP Y+DIGG +
Sbjct: 120 VVGLVD---PDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 177 KQIQELVEAIVLPMTH 192
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 279 (103.3 bits), Expect = 7.6e-37, Sum P(2) = 7.6e-37
Identities = 62/134 (46%), Positives = 85/134 (63%)
Query: 478 SDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVE 537
S++ G +E ++ R ++E L LDGF IKV+ ATNR D LDPALMR GRLDRK+E
Sbjct: 283 SEVSGDRE-VQ--RTMLEL-LNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIE 338
Query: 538 FGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 597
F P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 339 FPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 398
Query: 598 VASEKDFLEAVNKV 611
+ +DF E + +V
Sbjct: 399 EVNHEDFNEGIIQV 412
Score = 183 (69.5 bits), Expect = 7.6e-37, Sum P(2) = 7.6e-37
Identities = 34/66 (51%), Positives = 51/66 (77%)
Query: 108 VQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 167
V+ +L + ++ E+F LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LV
Sbjct: 184 VEAIVLPMTHK-ERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 242
Query: 168 QKYVGE 173
Q ++G+
Sbjct: 243 QMFIGD 248
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
VV L D P ++ G VGV+++ Y I LP + D V M+V+EKP Y+DIGG +
Sbjct: 121 VVGLVD---PDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 177
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 178 KQIQELVEAIVLPMTH 193
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 255 (94.8 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 53/123 (43%), Positives = 77/123 (62%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 270 GADREVQRI--LMEL-LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 326
Query: 542 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASE 601
D + +F++ M++ ++ E + AEI ++C EAGM A+R R V
Sbjct: 327 DRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILP 386
Query: 602 KDF 604
KDF
Sbjct: 387 KDF 389
Score = 209 (78.6 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVLL+GPPGTGKT+ A+AVAN T A FIRV+GSE VQ
Sbjct: 168 REAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQ 227
Query: 169 KYVGE 173
KY+GE
Sbjct: 228 KYLGE 232
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I++V I ++ V++ GI S TG T +++ L+ + +H
Sbjct: 70 KRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNAL 129
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D +++++ EKPDV+Y+DIGGC Q +++RE VE PL H + G DP
Sbjct: 130 VDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPP 189
Query: 507 RG 508
RG
Sbjct: 190 RG 191
Score = 138 (53.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 635 AKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIG 694
+ + V + ++ ++ V + R+ + LPP+ D +++++ EKPDV+Y+DIG
Sbjct: 99 SNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIG 158
Query: 695 GCKEQIEKLREVVETPLLH 713
GC Q +++RE VE PL H
Sbjct: 159 GCDIQKQEIREAVELPLTH 177
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 32/94 (34%), Positives = 45/94 (47%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVAN T A FIRV+GSE VQKY+GEG R + ++ ++ E
Sbjct: 202 KTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII--FIDE--- 256
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
+ EVQR ++EL+NQ + F
Sbjct: 257 -VDAIATARFDAQTGADREVQRILMELLNQMDGF 289
>FB|FBgn0039272 [details] [associations]
symbol:CG11836 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=IEA;NAS] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA;NAS]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 EMBL:AE014297
GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 RefSeq:NP_001163718.3
UniGene:Dm.3637 ProteinModelPortal:E1JIW3 SMR:E1JIW3 GeneID:43007
KEGG:dme:Dmel_CG11836 FlyBase:FBgn0039272 GenomeRNAi:43007
NextBio:831778 Bgee:E1JIW3 Uniprot:E1JIW3
Length = 325
Score = 399 (145.5 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 80/207 (38%), Positives = 121/207 (58%)
Query: 173 ERVLMEGCNNEGCGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTA 232
E ++ C+ + CG N RIVGG T VN+YPW+ + GKF CGG+L++ YVL+A
Sbjct: 69 ENSSLKNCDCD-CGFSNEEIRIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSA 127
Query: 233 AHCVRSSKRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLK 292
AHCV+ ++ K + V+ +H++ E+Q R V V+ H ++ ++++DIALL+
Sbjct: 128 AHCVKKLRKSK-IRVIFGDHDQEITSESQAIQRAVTAVIKHKSFDPD---TYNNDIALLR 183
Query: 293 LDTPLEFKPTVSPVCLPQLGEKFTQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECR 352
L P+ F + P+CLP+ R GTVVGWGR E G++ S + +VP+MS ECR
Sbjct: 184 LRKPISFSKIIKPICLPRYNYDPAGRIGTVVGWGRTSEGGELPSIVNQVKVPIMSITECR 243
Query: 353 QFPGFEAKLTGNMMCAGYVEGGKDSCQ 379
++T +M+CAG DSCQ
Sbjct: 244 NQRYKSTRITSSMLCAG--RPSMDSCQ 268
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 266 (98.7 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 58/134 (43%), Positives = 85/134 (63%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 279 GADREVQRI--LLEL-LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 335
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + IF M++ ++ E +AR P+ +GA+I S+C E+GM A+R R +
Sbjct: 336 DRRQKRLIFSTITSKMNLSEEVDLEDYVAR--PDKISGADINSICQESGMLAVRENRYIV 393
Query: 600 SEKDFLEAVNKVAR 613
KDF +A V +
Sbjct: 394 LAKDFEKAYKTVIK 407
Score = 194 (73.4 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 177 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 236
Query: 169 KYVGE 173
KY+GE
Sbjct: 237 KYLGE 241
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I+++ I ++ V++ T I S TG T D++ L+ + +H
Sbjct: 79 KRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNAL 138
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H + G DP
Sbjct: 139 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 198
Query: 507 RG 508
RG
Sbjct: 199 RG 200
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K+FL A +V R I + A +N I+ + + V + ++ ++
Sbjct: 68 KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA-IVGSTTGSNYYVRILSTIDRELLKPN 126
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + ++ + LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H
Sbjct: 127 ASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTH 186
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 266 (98.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 58/134 (43%), Positives = 85/134 (63%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 280 GADREVQRI--LLEL-LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + IF M++ ++ E +AR P+ +GA+I S+C E+GM A+R R +
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVAR--PDKISGADINSICQESGMLAVRENRYIV 394
Query: 600 SEKDFLEAVNKVAR 613
KDF +A V +
Sbjct: 395 LAKDFEKAYKTVIK 408
Score = 194 (73.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 169 KYVGE 173
KY+GE
Sbjct: 238 KYLGE 242
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I+++ I ++ V++ T I S TG T D++ L+ + +H
Sbjct: 80 KRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNAL 139
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H + G DP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 507 RG 508
RG
Sbjct: 200 RG 201
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K+FL A +V R I + A +N I+ + + V + ++ ++
Sbjct: 69 KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA-IVGSTTGSNYYVRILSTIDRELLKPN 127
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + ++ + LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H
Sbjct: 128 ASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTH 187
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 266 (98.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 58/134 (43%), Positives = 85/134 (63%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 280 GADREVQRI--LLEL-LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + IF M++ ++ E +AR P+ +GA+I S+C E+GM A+R R +
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVAR--PDKISGADINSICQESGMLAVRENRYIV 394
Query: 600 SEKDFLEAVNKVAR 613
KDF +A V +
Sbjct: 395 LAKDFEKAYKTVIK 408
Score = 194 (73.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 169 KYVGE 173
KY+GE
Sbjct: 238 KYLGE 242
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I+++ I ++ V++ T I S TG T D++ L+ + +H
Sbjct: 80 KRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNAL 139
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H + G DP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 507 RG 508
RG
Sbjct: 200 RG 201
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K+FL A +V R I + A +N I+ + + V + ++ ++
Sbjct: 69 KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA-IVGSTTGSNYYVRILSTIDRELLKPN 127
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + ++ + LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H
Sbjct: 128 ASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTH 187
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 266 (98.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 58/134 (43%), Positives = 85/134 (63%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 280 GADREVQRI--LLEL-LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + IF M++ ++ E +AR P+ +GA+I S+C E+GM A+R R +
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVAR--PDKISGADINSICQESGMLAVRENRYIV 394
Query: 600 SEKDFLEAVNKVAR 613
KDF +A V +
Sbjct: 395 LAKDFEKAYKTVIK 408
Score = 194 (73.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 169 KYVGE 173
KY+GE
Sbjct: 238 KYLGE 242
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I+++ I ++ V++ T I S TG T D++ L+ + +H
Sbjct: 80 KRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNAL 139
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H + G DP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 507 RG 508
RG
Sbjct: 200 RG 201
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K+FL A +V R I + A +N I+ + + V + ++ ++
Sbjct: 69 KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA-IVGSTTGSNYYVRILSTIDRELLKPN 127
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + ++ + LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H
Sbjct: 128 ASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTH 187
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 266 (98.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 58/134 (43%), Positives = 85/134 (63%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 280 GADREVQRI--LLEL-LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + IF M++ ++ E +AR P+ +GA+I S+C E+GM A+R R +
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVAR--PDKISGADINSICQESGMLAVRENRYIV 394
Query: 600 SEKDFLEAVNKVAR 613
KDF +A V +
Sbjct: 395 LAKDFEKAYKTVIK 408
Score = 194 (73.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 169 KYVGE 173
KY+GE
Sbjct: 238 KYLGE 242
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I+++ I ++ V++ T I S TG T D++ L+ + +H
Sbjct: 80 KRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNAL 139
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H + G DP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 507 RG 508
RG
Sbjct: 200 RG 201
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K+FL A +V R I + A +N I+ + + V + ++ ++
Sbjct: 69 KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA-IVGSTTGSNYYVRILSTIDRELLKPN 127
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + ++ + LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H
Sbjct: 128 ASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTH 187
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 266 (98.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 58/134 (43%), Positives = 85/134 (63%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 280 GADREVQRI--LLEL-LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + IF M++ ++ E +AR P+ +GA+I S+C E+GM A+R R +
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVAR--PDKISGADINSICQESGMLAVRENRYIV 394
Query: 600 SEKDFLEAVNKVAR 613
KDF +A V +
Sbjct: 395 LAKDFEKAYKTVIK 408
Score = 194 (73.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 169 KYVGE 173
KY+GE
Sbjct: 238 KYLGE 242
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I+++ I ++ V++ T I S TG T D++ L+ + +H
Sbjct: 80 KRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNAL 139
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H + G DP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 507 RG 508
RG
Sbjct: 200 RG 201
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K+FL A +V R I + A +N I+ + + V + ++ ++
Sbjct: 69 KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA-IVGSTTGSNYYVRILSTIDRELLKPN 127
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + ++ + LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H
Sbjct: 128 ASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTH 187
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 266 (98.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 58/134 (43%), Positives = 85/134 (63%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 280 GADREVQRI--LLEL-LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + IF M++ ++ E +AR P+ +GA+I S+C E+GM A+R R +
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVAR--PDKISGADINSICQESGMLAVRENRYIV 394
Query: 600 SEKDFLEAVNKVAR 613
KDF +A V +
Sbjct: 395 LAKDFEKAYKTVIK 408
Score = 194 (73.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 169 KYVGE 173
KY+GE
Sbjct: 238 KYLGE 242
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I+++ I ++ V++ T I S TG T D++ L+ + +H
Sbjct: 80 KRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNAL 139
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H + G DP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 507 RG 508
RG
Sbjct: 200 RG 201
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K+FL A +V R I + A +N I+ + + V + ++ ++
Sbjct: 69 KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA-IVGSTTGSNYYVRILSTIDRELLKPN 127
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + ++ + LPP+ D ++ M+ ++KPDV Y+DIGG Q +++RE VE PL H
Sbjct: 128 ASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTH 187
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 260 (96.6 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 57/125 (45%), Positives = 81/125 (64%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD NIKV+MATNR DTLDPAL+RPGRLDRK+E LP
Sbjct: 267 GADREVQRI--LLEL-LNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLP 323
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + +F M+V D+ E ++AR P+ + A+I ++C EAGM A+R R V
Sbjct: 324 DRRQKRLVFTTITSKMNVGEDVDLEDIIAR--PDKISNADINAICQEAGMHAVRENRYVV 381
Query: 600 SEKDF 604
+ KDF
Sbjct: 382 NAKDF 386
Score = 198 (74.8 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + + + +GI+PP+GVLLFGPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 165 REAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQ 224
Query: 169 KYVGE 173
KY+GE
Sbjct: 225 KYLGE 229
Score = 160 (61.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 46/122 (37%), Positives = 65/122 (53%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIH------ 453
K IKAV I ++ V+E GI S TG T D++ L+ + +H
Sbjct: 67 KRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCL 126
Query: 454 IPL-PPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
+ L PP+ D T++M+ +EKPD++YSDIGG Q +++RE VE PL H G DP
Sbjct: 127 VDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPP 186
Query: 507 RG 508
RG
Sbjct: 187 RG 188
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/120 (28%), Positives = 63/120 (52%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K+F+ A +V R + + A EN + + + + V + ++ ++
Sbjct: 56 KKEFIHAQEEVKRIKAVPLVIGQFLEAVDENNGIVASTTG-SNYYVRVLSTIDREQLKPS 114
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
VG+ + + +PP+ D T++M+ +EKPD++YSDIGG Q +++RE VE PL H
Sbjct: 115 SSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTH 174
Score = 40 (19.1 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 618 INADSENPKYIINVKQFAK 636
++A EN +Y++N K F K
Sbjct: 371 MHAVREN-RYVVNAKDFEK 388
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 264 (98.0 bits), Expect = 4.3e-36, Sum P(2) = 4.3e-36
Identities = 56/125 (44%), Positives = 81/125 (64%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 275 GADREVQRI--LLEL-LNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 331
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + +F M++ D+ E +AR P+ +GA+I ++C EAGM A+R R +
Sbjct: 332 DRRQKRLVFSTITSKMNLSEDVDLEEFVAR--PDKISGADINAICQEAGMHAVRENRYIV 389
Query: 600 SEKDF 604
KDF
Sbjct: 390 LAKDF 394
Score = 193 (73.0 bits), Expect = 4.3e-36, Sum P(2) = 4.3e-36
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 173 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQ 232
Query: 169 KYVGE 173
KY+GE
Sbjct: 233 KYLGE 237
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 48/134 (35%), Positives = 71/134 (52%)
Query: 389 LLKSYGQGQY-TKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNE 447
L K Y Q K I++V I ++ V++ TGI S TG T D++ L+
Sbjct: 63 LKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPS 122
Query: 448 QPLQIHIP-------LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
+ +H LPP+ D +++M+Q +EKPDV+Y+DIGG Q +++RE VE PL H
Sbjct: 123 ASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTH 182
Query: 501 LD-----GFDP-RG 508
+ G DP RG
Sbjct: 183 FELYKQIGIDPPRG 196
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/120 (28%), Positives = 64/120 (53%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K++L A +V R + + A +N I+ + + V + ++ ++
Sbjct: 64 KKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG-IVGSTTGSNYYVRILSTIDRELLKPS 122
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + ++ + LPP+ D +++M+Q +EKPDV+Y+DIGG Q +++RE VE PL H
Sbjct: 123 ASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTH 182
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 271 (100.5 bits), Expect = 5.3e-36, Sum P(2) = 5.3e-36
Identities = 70/177 (39%), Positives = 101/177 (57%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 244 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 303
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ L+GF +IKV+ ATNR D L PAL+R GRLDRK+EF P+ E R I +IH+
Sbjct: 304 LELLNQLNGFSSTADIKVIAATNRVDIL-PALLRSGRLDRKIEFPHPNEEARARIMQIHS 362
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
R M+V D+ FE L+R + GA+ ++VC EAGM A+R + +DF++A+ +V
Sbjct: 363 RKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEV 419
Score = 186 (70.5 bits), Expect = 5.3e-36, Sum P(2) = 5.3e-36
Identities = 34/66 (51%), Positives = 51/66 (77%)
Query: 108 VQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 167
++ +L + ++ EKF NLGI PPKGV+L+GPPGTGKTL ARA A +T + F+++ G +LV
Sbjct: 192 IEAVVLPMTHK-EKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 250
Query: 168 QKYVGE 173
Q ++G+
Sbjct: 251 QMFIGD 256
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G GV+++ Y I LP + D V M+V+E+P +SDIGG
Sbjct: 129 VIGLVDA---EKLKPGDLAGVNKDFYLILETLPAEYDARVKAMEVDERPTEQFSDIGGLD 185
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E V P+ H
Sbjct: 186 KQIQELIEAVVLPMTH 201
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 281 (104.0 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 69/161 (42%), Positives = 98/161 (60%)
Query: 470 EEKPDVTYSD----IGGCKEQIEKL--REVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
E+ P + + D IG + +K REV T LL+ LDGF +KVL ATNR D
Sbjct: 291 EKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVD 350
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERD-IRFELLARLCPNSTGAE 579
TLDPAL+R GRLDRK+EF LP E R + KIHAR + + + + + LAR GA+
Sbjct: 351 TLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARKLHCDNNSVNWRELARSTDEFNGAQ 410
Query: 580 IRSVCTEAGMFAIRARRKVASEKDFLEAVNKV-ARCTKIIN 619
+++V EAGM A+R + + +DF+EA+++V AR +K +N
Sbjct: 411 LKAVTVEAGMIALRNGKSIIKHEDFVEAISEVQARKSKSVN 451
Score = 176 (67.0 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+ Q +KF NLGI+PPKG L++GPPGTGKTL ARA A ++ A F+++ +LVQ ++G+
Sbjct: 220 MKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGD 277
Score = 129 (50.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 645 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLR 704
V P+ ++ +GV+++ Y + LP + D V M+V+EKP YSDIGG +QIE+L
Sbjct: 154 VDPSKLKPNDLIGVNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELI 213
Query: 705 EVVETPL 711
E V P+
Sbjct: 214 EAVVLPM 220
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 284 (105.0 bits), Expect = 7.7e-36, Sum P(2) = 7.7e-36
Identities = 72/182 (39%), Positives = 106/182 (58%)
Query: 448 QPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET--PLL 499
Q +Q++I K+ + E+ P + + D IG + EK REV T LL
Sbjct: 250 QLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELL 309
Query: 500 H-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMS 558
+ LDGF +KVL ATNR D LDPAL+R GRLDRK+EF LP + R I +IH+R M+
Sbjct: 310 NQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMT 369
Query: 559 VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKV-ARCTKI 617
+ DI ++ LAR GA++++V EAGM A+R + +DF+E +++V AR +K
Sbjct: 370 TDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKS 429
Query: 618 IN 619
++
Sbjct: 430 VS 431
Score = 169 (64.5 bits), Expect = 7.7e-36, Sum P(2) = 7.7e-36
Identities = 30/58 (51%), Positives = 44/58 (75%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+ + +KF ++GI PKG L++GPPGTGKTL ARA A +T+A F+++ +LVQ Y+GE
Sbjct: 201 MKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGE 258
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
+VD D + P D+ VGV+++ Y I LP + D V M+V+EKP TYSD+GG
Sbjct: 134 LVD-PDKLKPNDL-----VGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLD 187
Query: 698 EQIEKLREVVETPL 711
+QIE+L E + P+
Sbjct: 188 KQIEELVEAIVLPM 201
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 456 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
LP + D V M+V+EKP TYSD+GG +QIE+L E + P+ D F G
Sbjct: 159 LPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMG 211
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 262 (97.3 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 59/134 (44%), Positives = 84/134 (62%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 276 GADREVQRI--LLEL-LNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLP 332
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + +F M++ D+ E +AR P+ +GA+I S+C EAGM A+R R V
Sbjct: 333 DRRQKRLVFSTVCSRMNLSDDVDLEDWVAR--PDKISGADINSICQEAGMQAVRENRYVV 390
Query: 600 SEKDFLEAVNKVAR 613
KD +A V +
Sbjct: 391 LTKDLEKAYKNVVK 404
Score = 191 (72.3 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA T A FIRV+GSE VQ
Sbjct: 174 REAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQ 233
Query: 169 KYVGE 173
KY+GE
Sbjct: 234 KYLGE 238
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 456 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP-RG 508
LPP+ D ++ M++ +EKPD++Y DIGG Q +++RE VE PL H + G DP RG
Sbjct: 139 LPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRG 197
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/120 (28%), Positives = 60/120 (50%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
EK+ L A +V R + + A +N I+ + + V + + ++ G
Sbjct: 65 EKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHA-IVGSTTGSNYYVRVLSILDRELLKPG 123
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + + + LPP+ D ++ M++ +EKPD++Y DIGG Q +++RE VE PL H
Sbjct: 124 CSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTH 183
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 260 (96.6 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 57/134 (42%), Positives = 84/134 (62%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+ PGRLDRK+EF LP
Sbjct: 280 GADREVQRI--LLEL-LNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLP 336
Query: 542 DLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVA 599
D + +F M++ ++ E +AR P+ +GA+I S+C EAGM A+R R +
Sbjct: 337 DRRQKRLVFSTITSKMNLSEEVDLEDYVAR--PDKISGADINSICQEAGMLAVRENRYIV 394
Query: 600 SEKDFLEAVNKVAR 613
KDF +A V +
Sbjct: 395 LAKDFEKAYKTVIK 408
Score = 194 (73.4 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + E + +GI+PP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE VQ
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 169 KYVGE 173
KY+GE
Sbjct: 238 KYLGE 242
Score = 138 (53.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 41/122 (33%), Positives = 63/122 (51%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I+++ I ++ V++ T I S TG T D++ L+ + +H
Sbjct: 80 KRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNAL 139
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ M+ ++KPDV YSDIGG Q +++RE VE PL H + G DP
Sbjct: 140 VDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPP 199
Query: 507 RG 508
RG
Sbjct: 200 RG 201
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 35/120 (29%), Positives = 61/120 (50%)
Query: 601 EKDFLEAVNKVARCTKI-------INADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+K+FL A +V R I + A +N I+ + + V + ++ ++
Sbjct: 69 KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA-IVGSTTGSNYYVRILSTIDRELLKPN 127
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + ++ + LPP+ D ++ M+ ++KPDV YSDIGG Q +++RE VE PL H
Sbjct: 128 ASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTH 187
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 279 (103.3 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 67/151 (44%), Positives = 92/151 (60%)
Query: 470 EEKPDVTYSD----IGGCKEQIEKL--REVVET--PLLH-LDGFDPRGNIKVLMATNRPD 520
E+ P + + D IG + EK REV T LL+ LDGF +KV+ ATNR D
Sbjct: 276 EKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVD 335
Query: 521 TLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 580
TLDPAL+R GRLDRK+EF LP+ E R I +IH+R M+++ DI +E LAR GA +
Sbjct: 336 TLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAML 395
Query: 581 RSVCTEAGMFAIRARRKVASEKDFLEAVNKV 611
+SVC EAGM A+R + + F++ + +V
Sbjct: 396 KSVCVEAGMIALRQGDTKINHEHFMDGILEV 426
Score = 172 (65.6 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 30/58 (51%), Positives = 45/58 (77%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+ Q +KF LG++PPKG L+FGPPGTGKTL ARA A +++A F+++ +LVQ ++G+
Sbjct: 205 MQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGD 262
Score = 142 (55.0 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 35/111 (31%), Positives = 55/111 (49%)
Query: 601 EKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDR 660
E D E+ N+ + T++ +I + L V P ++ G +GV++
Sbjct: 101 EVDVQESANQNSEATRV------GKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNK 154
Query: 661 NKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
+ Y I LP + D V M+V+EKP YSDIGG +QIE+L E + P+
Sbjct: 155 DSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPM 205
Score = 64 (27.6 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 24/105 (22%), Positives = 47/105 (44%)
Query: 381 TLDEADIALLKSYGQGQYTKSIKAVEDDIQAV-IKRVNELTGIKESDTGLAPPALWDLTA 439
TL+E D G + + +E +I A I +N T + E+D + LT
Sbjct: 3 TLEELDALDQSQQGGSSNNEGLDGIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTH 62
Query: 440 DKQTL-----QNEQPLQIHIPLPPKIDPTVTMMQVE-EKPDVTYS 478
+K T+ +N++ + + LP + V ++ ++ ++ DV S
Sbjct: 63 EKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQES 107
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 249 (92.7 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 60/141 (42%), Positives = 86/141 (60%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDP-RGNIKVLMATNRPDTLDPALMRPGRLDRK 535
Y G + +I+ R ++E L LDGFD + +IKV+MATNR LDPAL+RPGR+DRK
Sbjct: 301 YDAQSGAEREIQ--RTMLEL-LNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRK 357
Query: 536 VEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 595
+ F PD + IF IH M++ D+ E L + + +GAEI+++ +EAG+ A+R R
Sbjct: 358 ILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRER 417
Query: 596 RKVASEKDFLEAVNKVARCTK 616
R DF +A KV + TK
Sbjct: 418 RMRVVMDDFRQAREKVLK-TK 437
Score = 208 (78.3 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 38/62 (61%), Positives = 52/62 (83%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + PE + +GI+PPKGV+L+G PGTGKTL A+AVAN+T A F+RV+GSEL+QKY+
Sbjct: 207 VELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 266
Query: 172 GE 173
G+
Sbjct: 267 GD 268
Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGAR 88
K + AVAN+T A F+RV+GSEL+QKY+G+G R +V ++ E
Sbjct: 238 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIV--FIDE--- 292
Query: 89 MIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKF 122
I E+QRTMLEL+NQ + F
Sbjct: 293 -IDAIGTKRYDAQSGAEREIQRTMLELLNQLDGF 325
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 252 (93.8 bits), Expect = 6.9e-35, Sum P(2) = 6.9e-35
Identities = 67/160 (41%), Positives = 89/160 (55%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D IG + EK REV T
Sbjct: 235 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 294
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF P +KV+ ATNR D LDPAL+R GRLDRK+EF +P+ E R I +IH+
Sbjct: 295 LELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 354
Query: 555 RSMSVERDIRFELLARLCPN-STGAEIRSVCTEAGMFAIR 593
R M+V D+ +E LAR CP S + EAGM A+R
Sbjct: 355 RKMNVSPDVNYEELAR-CPTISMALSAKQFGVEAGMIALR 393
Score = 195 (73.7 bits), Expect = 6.9e-35, Sum P(2) = 6.9e-35
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
+N EKF NLGI+PPKGVL++GPPGTGKTL ARA A +T A F+++ G +LVQ ++G+
Sbjct: 190 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 247
Score = 128 (50.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+E+P YSDIGG
Sbjct: 120 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD 176
Query: 698 EQIEKLREVVETPLLH 713
+QI++L E + P+ H
Sbjct: 177 KQIQELVEAIVLPMNH 192
Score = 45 (20.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 654 MRVG-VDRNKYQIHIPLPPKIDPTVTMMQVEEK-----PDVTYSDIGGC 696
+R G +DR +I P+P + + +MQ+ + PDV Y ++ C
Sbjct: 327 LRSGRLDR---KIEFPMPNE-EARARIMQIHSRKMNVSPDVNYEELARC 371
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 275 (101.9 bits), Expect = 7.6e-35, Sum P(2) = 7.6e-35
Identities = 72/185 (38%), Positives = 103/185 (55%)
Query: 444 LQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSD----IGGCKEQIEKL--REVVET- 496
L Q +Q+ I K+ + E+ P + + D +G + EK REV T
Sbjct: 276 LAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRTM 335
Query: 497 -PLLH-LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHA 554
LL+ LDGF IKVL ATNR D LDPAL+R GRLDRK+EF LP+ E R +I +IH+
Sbjct: 336 LELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARANILQIHS 395
Query: 555 RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKVARC 614
R M+VE + + LAR GA++++VC EAGM A+R +++++A+ +V
Sbjct: 396 RKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGHSKIGHENYVDAIAEVQAK 455
Query: 615 TKIIN 619
K N
Sbjct: 456 KKDTN 460
Score = 174 (66.3 bits), Expect = 7.6e-35, Sum P(2) = 7.6e-35
Identities = 33/75 (44%), Positives = 51/75 (68%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+ ++ + + E+F LGI+ PKG L++GPPGTGKTL ARA A T+A F+++ G +L
Sbjct: 222 EIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQL 281
Query: 167 VQKYVGERV-LMEGC 180
VQ ++G+ L+ C
Sbjct: 282 VQMFIGDGAKLVRDC 296
Score = 119 (46.9 bits), Expect = 0.00088, P = 0.00088
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 650 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVET 709
++ G +GV+++ Y I LP + D V M+V+EKP Y+DIGG +QIE++ E +
Sbjct: 170 LKPGDLIGVNKDSYLILDTLPAEYDNRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVW 229
Query: 710 PL 711
P+
Sbjct: 230 PM 231
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 250 (93.1 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 53/123 (43%), Positives = 76/123 (61%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 253 GADREVQRI--LLEL-LNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 309
Query: 542 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASE 601
D + + IF+ M+V D+ E + A+I ++ EAGM AIR R + +
Sbjct: 310 DRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITA 369
Query: 602 KDF 604
DF
Sbjct: 370 NDF 372
Score = 194 (73.4 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 119 PEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
PE + +GIEPP G+L++GPPGTGKT+ +AVAN T FI V+GSE VQKY+GE
Sbjct: 161 PELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGE 215
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 24/89 (26%), Positives = 52/89 (58%)
Query: 623 ENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 682
+N I++ + + V + ++ D++ + V + R+ + I LP + D ++ ++Q+
Sbjct: 70 DNNYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQI 129
Query: 683 EEKPDVTYSDIGGCKEQIEKLREVVETPL 711
E+P+V Y+D+GG Q ++++E VE PL
Sbjct: 130 TERPNVKYTDLGGLDMQKQEMKEAVELPL 158
Score = 45 (20.9 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 27/122 (22%), Positives = 51/122 (41%)
Query: 381 TLDEADIALLKSYGQGQYTKSIKAV---EDDIQAVIKRVNELTGIKESDTG--------L 429
TL++ D+ S +++ SI + E D + ++ E +K +D G +
Sbjct: 91 TLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEM 150
Query: 430 APPALWDLTADK--QTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQI 487
LT + + + E P+ I I PP T+ + V + VT+ + G E +
Sbjct: 151 KEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVG-SEFV 209
Query: 488 EK 489
+K
Sbjct: 210 QK 211
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 250 (93.1 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 53/123 (43%), Positives = 76/123 (61%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LP
Sbjct: 253 GADREVQRI--LLEL-LNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 309
Query: 542 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASE 601
D + + IF+ M+V D+ E + A+I ++ EAGM AIR R + +
Sbjct: 310 DRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITA 369
Query: 602 KDF 604
DF
Sbjct: 370 NDF 372
Score = 194 (73.4 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 119 PEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
PE + +GIEPP G+L++GPPGTGKT+ +AVAN T FI V+GSE VQKY+GE
Sbjct: 161 PELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGE 215
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 24/89 (26%), Positives = 52/89 (58%)
Query: 623 ENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 682
+N I++ + + V + ++ D++ + V + R+ + I LP + D ++ ++Q+
Sbjct: 70 DNNYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQI 129
Query: 683 EEKPDVTYSDIGGCKEQIEKLREVVETPL 711
E+P+V Y+D+GG Q ++++E VE PL
Sbjct: 130 TERPNVKYTDLGGLDMQKQEMKEAVELPL 158
Score = 45 (20.9 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 27/122 (22%), Positives = 51/122 (41%)
Query: 381 TLDEADIALLKSYGQGQYTKSIKAV---EDDIQAVIKRVNELTGIKESDTG--------L 429
TL++ D+ S +++ SI + E D + ++ E +K +D G +
Sbjct: 91 TLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEM 150
Query: 430 APPALWDLTADK--QTLQNEQPLQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQI 487
LT + + + E P+ I I PP T+ + V + VT+ + G E +
Sbjct: 151 KEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVG-SEFV 209
Query: 488 EK 489
+K
Sbjct: 210 QK 211
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 234 (87.4 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 48/118 (40%), Positives = 72/118 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R VV L +DG R N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR +
Sbjct: 332 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVL 391
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDFLEA 607
+IH ++M + D+ E LA GA+I S+C+EA M IR + + ++D ++A
Sbjct: 392 RIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDA 449
Score = 183 (69.5 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R M+EL + P+ F +GI+PP+GVL++GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 227 REMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMS 286
Query: 169 KYVGE 173
K GE
Sbjct: 287 KMAGE 291
Score = 180 (68.4 bits), Expect = 7.4e-23, Sum P(3) = 7.4e-23
Identities = 51/179 (28%), Positives = 85/179 (47%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
D GG ++ VV L +DG + + N+ V+ ATNRPD +DPA++RPGRLD+ +
Sbjct: 602 DAGGASDR------VVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYV 655
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR----A 594
LPD R I R +E + +A+ +GA++ + A +AI+ A
Sbjct: 656 PLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEA 715
Query: 595 RRKVASEKDFLEAVNKVARCTKIINADSE---NPKYIINVKQFAKFVVDLADSVAPTDI 650
R+ +EK+ V + A+ E +P I + FA+ + SV+ ++
Sbjct: 716 HRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAEL 774
Score = 159 (61.0 bits), Expect = 7.4e-23, Sum P(3) = 7.4e-23
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E++ T+ + P+++ G+ P KGVL +GPPGTGKTL A+AVA A FI V G EL
Sbjct: 498 ELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPEL 557
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 558 LSMWYGE 564
Score = 90 (36.7 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
++DL + ++ + + V +D ++ + P + TV E +VT+ D+GG
Sbjct: 439 LIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVV-----ESVNVTWDDVGGLD 493
Query: 698 EQIEKLREVVETPLLH 713
E E+L+E VE P+LH
Sbjct: 494 EIKEELKETVEYPVLH 509
Score = 89 (36.4 bits), Expect = 8.4e-25, Sum P(3) = 8.4e-25
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 474 DVTYSDIGGCKEQIEKLREVVETPLLH 500
+V Y DIGGC++Q+ ++RE+VE PL H
Sbjct: 210 EVGYDDIGGCRKQMAQIREMVELPLRH 236
Score = 88 (36.0 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
+P+ V E +VT+ D+GG E E+L+E VE P+LH D + G
Sbjct: 470 NPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFG 517
Score = 59 (25.8 bits), Expect = 7.4e-23, Sum P(3) = 7.4e-23
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 1 MLELINQIHISQTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
M+EL + Q F I +KP + G K + AVAN T A F + G E++
Sbjct: 229 MVEL--PLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMS 286
Query: 55 KYVGE 59
K GE
Sbjct: 287 KMAGE 291
Score = 55 (24.4 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 267 AVANETGAFFFLINGPEVMSKMAGE 291
Score = 52 (23.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + AVA A FI V G EL+ + GE
Sbjct: 534 KTLLAKAVATEVSANFISVKGPELLSMWYGE 564
Score = 49 (22.3 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVA A FI V G EL+ + GE
Sbjct: 540 AVATEVSANFISVKGPELLSMWYGE 564
Score = 37 (18.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 17/60 (28%), Positives = 21/60 (35%)
Query: 567 LLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKVARCTKIINADSENPK 626
L+AR N TGA + M + + K F EA I DS PK
Sbjct: 263 LMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPK 322
>FB|FBgn0031619 [details] [associations]
symbol:CG3355 species:7227 "Drosophila melanogaster"
[GO:0004252 "serine-type endopeptidase activity" evidence=ISS;NAS]
[GO:0006508 "proteolysis" evidence=IEA;NAS] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114
Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135
PROSITE:PS50240 SMART:SM00020 EMBL:AE014134 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 HSSP:P00760
GeneTree:ENSGT00700000104440 UniGene:Dm.10820 MEROPS:S01.B40
GeneID:33667 KEGG:dme:Dmel_CG3355 FlyBase:FBgn0031619
ChiTaRS:CG3355 GenomeRNAi:33667 NextBio:784682 RefSeq:NP_608848.1
ProteinModelPortal:Q9VR15 SMR:Q9VR15 IntAct:Q9VR15
MINT:MINT-1005450 PRIDE:Q9VR15 EnsemblMetazoa:FBtr0077376
UCSC:CG3355-RA InParanoid:Q9VR15 OMA:NYDPNRI PhylomeDB:Q9VR15
ArrayExpress:Q9VR15 Bgee:Q9VR15 Uniprot:Q9VR15
Length = 314
Score = 379 (138.5 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 80/199 (40%), Positives = 122/199 (61%)
Query: 185 CGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKF---FCGGTLISDRYVLTAAHCVRSSKR 241
CG PN ++RIVGG N+YPW L + + FCGG+LI+DRYVLTAAHCV ++
Sbjct: 68 CGTPN-VNRIVGGQQVRSNKYPWTAQLVKGRHYPRLFCGGSLINDRYVLTAAHCVHGNRD 126
Query: 242 QKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKP 301
Q + + + + +R++ + I R+VV+ HP Y+ + D+ALLKL++P+
Sbjct: 127 Q--ITIRLLQIDRSS-RDPGI-VRKVVQTTVHPNYDPNRIVN---DVALLKLESPVPLTG 179
Query: 302 TVSPVCLPQLGEKFTQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKL 361
+ PVCLP+ F +T V GWG ++E G ++ L+ VPV++N +CRQ ++ K+
Sbjct: 180 NMRPVCLPEANHNFDGKTAVVAGWGLIKEGGVTSNYLQEVNVPVITNAQCRQ-TRYKDKI 238
Query: 362 TGNMMCAGYVE-GGKDSCQ 379
M+CAG V+ GGKD+CQ
Sbjct: 239 AEVMLCAGLVQQGGKDACQ 257
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 235 (87.8 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 47/105 (44%), Positives = 66/105 (62%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R VV L +DG R N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD EGR I
Sbjct: 333 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEIL 392
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 595
+IH ++M + D+ E +A GA+I S+C+EA M IR +
Sbjct: 393 RIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREK 437
Score = 190 (71.9 bits), Expect = 3.2e-25, Sum P(3) = 3.2e-25
Identities = 51/179 (28%), Positives = 88/179 (49%)
Query: 476 TYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 535
++ D GG ++ VV L +DG + + N+ V+ ATNRPD +DPAL+RPGRLD+
Sbjct: 600 SHGDAGGASDR------VVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQL 653
Query: 536 VEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR-- 593
+ LPD R I + R+ +E + +A++ +GA++ + + FAI+
Sbjct: 654 IYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDS 713
Query: 594 --ARRKVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDI 650
A+ K+ K+ E V K+ + E+P I F + + SV+ ++
Sbjct: 714 IEAQVKINKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMKTAKRSVSDAEL 772
Score = 184 (69.8 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + P+ F ++GI+PPKG+L++GPPGTGKT+ ARAVAN T A F + G E++
Sbjct: 228 RELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMS 287
Query: 169 KYVGE 173
K GE
Sbjct: 288 KMAGE 292
Score = 165 (63.1 bits), Expect = 3.2e-25, Sum P(3) = 3.2e-25
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 106 NEVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
NE++ T+ + P+++ G+ P KGVL FGPPGTGKTL A+AVA A FI V G E
Sbjct: 498 NELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPE 557
Query: 166 LVQKYVGE 173
L+ + GE
Sbjct: 558 LLSMWYGE 565
Score = 94 (38.1 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 47/168 (27%), Positives = 73/168 (43%)
Query: 474 DVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG--NIKVLMATNRPDTLDPALMRPGR 531
+V Y DIGGCK+Q+ ++RE+VE PL H F G K ++ P T + R
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 532 LDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGA-EIRSVCTEAGMF 590
+ F L + G + K+ S S R FE + P+ EI S+ +
Sbjct: 271 NETGAFFFL--INGPEIMSKMAGESESNLRKA-FEEAEKNSPSIIFIDEIDSIAPKRDKT 327
Query: 591 AIRARRKVASEKDFLEAVNKVARCTKIINADSENPKYIIN-VKQFAKF 637
R+V S+ L K AR ++ A + P I +++F +F
Sbjct: 328 NGEVERRVVSQLLTLMDGMK-ARSNVVVIAATNRPNSIDPALRRFGRF 374
Score = 84 (34.6 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
++DL + T++ + V D ++ + P + TV E +VT+ DIGG
Sbjct: 440 LIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVV-----ENVNVTWDDIGGLD 494
Query: 698 EQIEKLREVVETPLLH 713
+L+E VE P+LH
Sbjct: 495 NIKNELKETVEYPVLH 510
Score = 80 (33.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
+P+ V E +VT+ DIGG +L+E VE P+LH D + G
Sbjct: 471 NPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFG 518
Score = 65 (27.9 bits), Expect = 3.2e-25, Sum P(3) = 3.2e-25
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 12 QTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
Q F +I +KP + G K I AVAN T A F + G E++ K GE
Sbjct: 239 QLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGE 292
Score = 56 (24.8 bits), Expect = 6.5e-21, Sum P(3) = 6.5e-21
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 268 AVANETGAFFFLINGPEIMSKMAGE 292
Score = 52 (23.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + AVA A FI V G EL+ + GE
Sbjct: 535 KTLLAKAVATEVSANFISVKGPELLSMWYGE 565
Score = 49 (22.3 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVA A FI V G EL+ + GE
Sbjct: 541 AVATEVSANFISVKGPELLSMWYGE 565
Score = 39 (18.8 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 220 GGTLISDRYVLTAAHCVRSSKRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQ 279
G + + D+ TA +R K+ L+V + ++ +V T ++++ +
Sbjct: 15 GASAVDDK---TATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVK 71
Query: 280 GAKSHDHDIALLKLD 294
G K D + +L D
Sbjct: 72 GKKRKDTVLIVLADD 86
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 235 (87.8 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 47/105 (44%), Positives = 66/105 (62%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R VV L +DG R N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD EGR I
Sbjct: 333 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEIL 392
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 595
+IH ++M + D+ E +A GA+I S+C+EA M IR +
Sbjct: 393 RIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREK 437
Score = 190 (71.9 bits), Expect = 3.2e-25, Sum P(3) = 3.2e-25
Identities = 51/179 (28%), Positives = 88/179 (49%)
Query: 476 TYSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 535
++ D GG ++ VV L +DG + + N+ V+ ATNRPD +DPAL+RPGRLD+
Sbjct: 600 SHGDAGGASDR------VVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQL 653
Query: 536 VEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR-- 593
+ LPD R I + R+ +E + +A++ +GA++ + + FAI+
Sbjct: 654 IYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDS 713
Query: 594 --ARRKVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDI 650
A+ K+ K+ E V K+ + E+P I F + + SV+ ++
Sbjct: 714 IEAQVKINKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMKTAKRSVSDAEL 772
Score = 184 (69.8 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + P+ F ++GI+PPKG+L++GPPGTGKT+ ARAVAN T A F + G E++
Sbjct: 228 RELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMS 287
Query: 169 KYVGE 173
K GE
Sbjct: 288 KMAGE 292
Score = 165 (63.1 bits), Expect = 3.2e-25, Sum P(3) = 3.2e-25
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 106 NEVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 165
NE++ T+ + P+++ G+ P KGVL FGPPGTGKTL A+AVA A FI V G E
Sbjct: 498 NELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPE 557
Query: 166 LVQKYVGE 173
L+ + GE
Sbjct: 558 LLSMWYGE 565
Score = 94 (38.1 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 47/168 (27%), Positives = 73/168 (43%)
Query: 474 DVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG--NIKVLMATNRPDTLDPALMRPGR 531
+V Y DIGGCK+Q+ ++RE+VE PL H F G K ++ P T + R
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 532 LDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGA-EIRSVCTEAGMF 590
+ F L + G + K+ S S R FE + P+ EI S+ +
Sbjct: 271 NETGAFFFL--INGPEIMSKMAGESESNLRKA-FEEAEKNSPSIIFIDEIDSIAPKRDKT 327
Query: 591 AIRARRKVASEKDFLEAVNKVARCTKIINADSENPKYIIN-VKQFAKF 637
R+V S+ L K AR ++ A + P I +++F +F
Sbjct: 328 NGEVERRVVSQLLTLMDGMK-ARSNVVVIAATNRPNSIDPALRRFGRF 374
Score = 84 (34.6 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
++DL + T++ + V D ++ + P + TV E +VT+ DIGG
Sbjct: 440 LIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVV-----ENVNVTWDDIGGLD 494
Query: 698 EQIEKLREVVETPLLH 713
+L+E VE P+LH
Sbjct: 495 NIKNELKETVEYPVLH 510
Score = 80 (33.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
+P+ V E +VT+ DIGG +L+E VE P+LH D + G
Sbjct: 471 NPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFG 518
Score = 65 (27.9 bits), Expect = 3.2e-25, Sum P(3) = 3.2e-25
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 12 QTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
Q F +I +KP + G K I AVAN T A F + G E++ K GE
Sbjct: 239 QLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGE 292
Score = 56 (24.8 bits), Expect = 6.5e-21, Sum P(3) = 6.5e-21
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 268 AVANETGAFFFLINGPEIMSKMAGE 292
Score = 52 (23.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + AVA A FI V G EL+ + GE
Sbjct: 535 KTLLAKAVATEVSANFISVKGPELLSMWYGE 565
Score = 49 (22.3 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVA A FI V G EL+ + GE
Sbjct: 541 AVATEVSANFISVKGPELLSMWYGE 565
Score = 39 (18.8 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 220 GGTLISDRYVLTAAHCVRSSKRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQ 279
G + + D+ TA +R K+ L+V + ++ +V T ++++ +
Sbjct: 15 GASAVDDK---TATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVK 71
Query: 280 GAKSHDHDIALLKLD 294
G K D + +L D
Sbjct: 72 GKKRKDTVLIVLADD 86
>FB|FBgn0034666 [details] [associations]
symbol:CG9294 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=IEA;NAS] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA;NAS]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 EMBL:AE013599
GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640
GeneTree:ENSGT00700000104440 HSSP:P00761 RefSeq:NP_995920.1
UniGene:Dm.26994 ProteinModelPortal:Q7KVM3 SMR:Q7KVM3
MEROPS:S01.B37 PaxDb:Q7KVM3 PRIDE:Q7KVM3 EnsemblMetazoa:FBtr0071720
GeneID:37491 KEGG:dme:Dmel_CG9294 UCSC:CG9294-RB
FlyBase:FBgn0034666 InParanoid:Q7KVM3 OMA:LEHNRSH OrthoDB:EOG495X7D
PhylomeDB:Q7KVM3 GenomeRNAi:37491 NextBio:803923
ArrayExpress:Q7KVM3 Bgee:Q7KVM3 Uniprot:Q7KVM3
Length = 352
Score = 372 (136.0 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 80/198 (40%), Positives = 113/198 (57%)
Query: 185 CGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKD 244
CG+ N + +IVGG T V++YPW+ + +F+C G+LI+D YVLTAAHCV +
Sbjct: 92 CGLINTLYKIVGGQETRVHQYPWMAVILIYNRFYCSGSLINDLYVLTAAHCVEGVP--PE 149
Query: 245 LIVV-ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKP-T 302
LI + EHNR+ + + R V +V H YN +S D+D+A+L+L+ PL+ +
Sbjct: 150 LITLRFLEHNRSHSNDDIVIQRYVSRVKVHELYNP---RSFDNDLAVLRLNQPLDMRHHR 206
Query: 303 VSPVCLPQLGEKFTQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFE-AKL 361
+ P+CLP F G V GWG E G LR V V+ ECR + ++
Sbjct: 207 LRPICLPVQSYSFDHELGIVAGWGAQREGGFGTDTLREVDVVVLPQSECRNGTTYRPGQI 266
Query: 362 TGNMMCAGYV-EGGKDSC 378
T NMMCAGY+ EGGKD+C
Sbjct: 267 TDNMMCAGYISEGGKDAC 284
>FB|FBgn0036891 [details] [associations]
symbol:CG9372 species:7227 "Drosophila melanogaster"
[GO:0008236 "serine-type peptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=IEA;NAS] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA;NAS] [GO:0048812
"neuron projection morphogenesis" evidence=IMP] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR006604 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 SMART:SM00680
EMBL:AE014296 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494
eggNOG:COG5640 HSSP:P00760 GeneTree:ENSGT00700000104440
EMBL:AY071128 RefSeq:NP_649132.1 UniGene:Dm.9756 SMR:Q9VW19
MEROPS:S01.413 EnsemblMetazoa:FBtr0074945 GeneID:40137
KEGG:dme:Dmel_CG9372 UCSC:CG9372-RA FlyBase:FBgn0036891
InParanoid:Q9VW19 OMA:TIGIVSW OrthoDB:EOG4RFJ83 ChiTaRS:CG9372
GenomeRNAi:40137 NextBio:817185 Uniprot:Q9VW19
Length = 408
Score = 371 (135.7 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 76/199 (38%), Positives = 115/199 (57%)
Query: 184 GCGVPNRM-DRIVGGWTTEVNEYPWVVALEQAGKFF--CGGTLISDRYVLTAAHCVRSSK 240
GCG+ +R R+ GG E +E+PW+ AL Q G F CGG LI+DR+VLTAAHC+ K
Sbjct: 163 GCGITSRQFPRLTGGRPAEPDEWPWMAALLQEGLPFVWCGGVLITDRHVLTAAHCIYK-K 221
Query: 241 RQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFK 300
++D+ V + E+N + ET+ R+ ++ H YN Q ++D+DIA++++D F
Sbjct: 222 NKEDIFVRLGEYNTHMLNETRARDFRIANMVLHIDYNPQ---NYDNDIAIVRIDRATIFN 278
Query: 301 PTVSPVCLPQLGEKFTQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAK 360
+ PVC+P + E ++ R V GWG + G ++ L +PV +CR F
Sbjct: 279 TYIWPVCMPPVNEDWSDRNAIVTGWGTQKFGGPHSNILMEVNLPVWKQSDCRS--SFVQH 336
Query: 361 LTGNMMCAGYVEGGKDSCQ 379
+ MCAG+ EGG+DSCQ
Sbjct: 337 VPDTAMCAGFPEGGQDSCQ 355
>FB|FBgn0036436 [details] [associations]
symbol:CG4914 species:7227 "Drosophila melanogaster"
[GO:0004252 "serine-type endopeptidase activity" evidence=ISS;NAS]
[GO:0006508 "proteolysis" evidence=IEA;NAS] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114
Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135
PROSITE:PS50240 SMART:SM00020 EMBL:AE014296 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HSSP:P00760
GeneTree:ENSGT00700000104440 EMBL:AY061564 RefSeq:NP_648711.1
UniGene:Dm.3549 SMR:Q9VUG2 EnsemblMetazoa:FBtr0075712 GeneID:39597
KEGG:dme:Dmel_CG4914 UCSC:CG4914-RA FlyBase:FBgn0036436
InParanoid:Q9VUG2 OMA:PVFRQNP OrthoDB:EOG4H44K5 GenomeRNAi:39597
NextBio:814450 Uniprot:Q9VUG2
Length = 374
Score = 369 (135.0 bits), Expect = 3.4e-33, P = 3.4e-33
Identities = 83/200 (41%), Positives = 118/200 (59%)
Query: 185 CGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKD 244
CG N RIVGG TT V+EYPW+ L +F+CGGTLI+DRYVLTAAHCV+
Sbjct: 119 CGERNDESRIVGGTTTGVSEYPWMARLSYFNRFYCGGTLINDRYVLTAAHCVKGFMWFM- 177
Query: 245 LIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVS 304
+ V EH+R E ETR V++ + K++ + D+DIALL+L+ + +
Sbjct: 178 IKVTFGEHDRCNDKERP-ETRFVLRAFSQ-KFSFS---NFDNDIALLRLNDRVPITSFIR 232
Query: 305 PVCLPQLGEKFTQRTGT---VVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKL 361
P+CLP++ ++ GT GWG ++E G+ + L+ +VPV+ N EC + K+
Sbjct: 233 PICLPRVEQRQDLFVGTKAIATGWGTLKEDGKPSCLLQEVEVPVLDNDECVAQTNYTQKM 292
Query: 362 -TGNMMCAGYVE-GGKDSCQ 379
T NMMC+GY GG+DSCQ
Sbjct: 293 ITKNMMCSGYPGVGGRDSCQ 312
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 224 (83.9 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R VV L +DG R N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 342 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEIL 401
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDFLEA 607
+IH ++M + D+ E +A G+++ S+C+EA M IR + + ++D ++A
Sbjct: 402 RIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDA 459
Score = 183 (69.5 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + P+ F ++GI+PP+G+L++GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 237 RELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMS 296
Query: 169 KYVGE 173
K GE
Sbjct: 297 KMAGE 301
Score = 180 (68.4 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
VV L +DG + + N+ V+ ATNRPD +DPALMRPGRLD+ + LPD E R I +
Sbjct: 619 VVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQT 678
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
R V D+ +A+ +GA++ V A AI+
Sbjct: 679 QLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIK 719
Score = 178 (67.7 bits), Expect = 3.6e-25, Sum P(3) = 3.6e-25
Identities = 37/71 (52%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELINQP----EKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
EV+R + E + P EKF+ G+ P KGVL FGPPGTGKTL A+A+AN A FI V
Sbjct: 504 EVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVK 563
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 564 GPELLSMWFGE 574
Score = 88 (36.0 bits), Expect = 5.1e-23, Sum P(3) = 5.1e-23
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 474 DVTYSDIGGCKEQIEKLREVVETPLLH 500
+V Y DIGGC+ Q+ ++RE+VE PL H
Sbjct: 220 EVGYDDIGGCRRQMAQIRELVELPLRH 246
Score = 84 (34.6 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
++DL + ++ + + V +D ++ + P + TV E P+V + DIGG +
Sbjct: 449 MIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRETVV-----EVPNVRWEDIGGLE 503
Query: 698 EQIEKLREVVETPLLH 713
E +LRE V+ P+++
Sbjct: 504 EVKRELRETVQMPVMY 519
Score = 81 (33.6 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P+V + DIGG +E +LRE V+ P+++ + F
Sbjct: 480 NPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKF 523
Score = 62 (26.9 bits), Expect = 3.6e-25, Sum P(3) = 3.6e-25
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 12 QTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
Q F +I +KP + G K + AVAN T A F + G E++ K GE
Sbjct: 248 QLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGE 301
Score = 56 (24.8 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 277 AVANETGAFFFLINGPEIMSKMAGE 301
Score = 56 (24.8 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI V G EL+ + GE
Sbjct: 544 KTLLAKAIANECSANFISVKGPELLSMWFGE 574
Score = 53 (23.7 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI V G EL+ + GE
Sbjct: 550 AIANECSANFISVKGPELLSMWFGE 574
Score = 45 (20.9 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 400 KSIK-AVEDDIQAVIKRVNELTGIKESD 426
+++K A++D I+ IKR NE TG +D
Sbjct: 712 RAVKLAIKDSIEEDIKRENE-TGEAPAD 738
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 228 (85.3 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 50/135 (37%), Positives = 78/135 (57%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF-GL 540
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF
Sbjct: 249 GADREVQRI--LIEL-LTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSY 305
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
D R +F+ M + ++ + S+GA+I ++ +AG+ A+R R V
Sbjct: 306 RDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVIL 365
Query: 601 EKDFLEAVNKVARCT 615
+ D EA + + T
Sbjct: 366 QSDIEEAYARAVKPT 380
Score = 201 (75.8 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + Q + + +GI+PP+GVLL+GPPGTGKT+ +AVAN T A FIRV+GSE VQ
Sbjct: 147 REAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQ 206
Query: 169 KYVGE 173
KY+GE
Sbjct: 207 KYLGE 211
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQP--LQIHIP-- 455
K I++V I ++ +++ T I S TG T D++ L+ LQ H
Sbjct: 49 KRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNAL 108
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D +++M++ +E+PDV+Y+D+GG Q +++RE VE PL D G DP
Sbjct: 109 VDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPP 168
Query: 507 RG 508
RG
Sbjct: 169 RG 170
Score = 127 (49.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 616 KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 675
+ + A +N I+ + +VV + ++ ++ V + R+ + LPP+ D
Sbjct: 60 QFLEAIDQNTA-IVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADS 118
Query: 676 TVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPL 711
+++M++ +E+PDV+Y+D+GG Q +++RE VE PL
Sbjct: 119 SISMLRPDERPDVSYADVGGLDVQKQEVREAVELPL 154
Score = 109 (43.4 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 22/30 (73%), Positives = 25/30 (83%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
AVAN T A FIRV+GSE VQKY+GEG RM+
Sbjct: 187 AVANSTAANFIRVVGSEFVQKYLGEGPRMV 216
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 222 (83.2 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 45/118 (38%), Positives = 72/118 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R VV L +DG R N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 340 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 399
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDFLEA 607
+IH ++M + D+ E +A G+++ ++C+EA M IR + + ++D ++A
Sbjct: 400 QIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDA 457
Score = 189 (71.6 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R M+EL + P+ F ++GI+PP+GVLL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 235 REMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMS 294
Query: 169 KYVGE 173
K GE
Sbjct: 295 KMAGE 299
Score = 180 (68.4 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 50/172 (29%), Positives = 82/172 (47%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
D GG ++ VV L +DG + N+ V+ ATNRP+ LDPAL RPGRLD +
Sbjct: 611 DAGGASDR------VVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYV 664
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 598
LPD GR I K R V D+ + +A +GA++ + A AI+ +
Sbjct: 665 PLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIK--ESI 722
Query: 599 ASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDI 650
++ + +A+ + + D+E+P + + F + + SV+ +I
Sbjct: 723 TADINRTKALEAAGEDVPM-DEDAEDPVPELTKRHFEEAMQQARKSVSDVEI 773
Score = 167 (63.8 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 31/58 (53%), Positives = 41/58 (70%)
Query: 116 INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 173
++ PEKF+ G+ P +GVL +GPPGTGKT+ A+AVAN A FI V G EL+ + GE
Sbjct: 516 VDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGE 573
Score = 89 (36.4 bits), Expect = 3.7e-22, Sum P(3) = 3.7e-22
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 474 DVTYSDIGGCKEQIEKLREVVETPLLH 500
+V Y DIGGC++Q+ ++RE+VE PL H
Sbjct: 218 EVGYDDIGGCRKQMAQIREMVELPLRH 244
Score = 77 (32.2 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
++DL + ++ + + V ++ ++ + + P + V E P+V + DIGG
Sbjct: 447 LIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSALREVA----VVEVPNVRWEDIGGLD 502
Query: 698 EQIEKLREVVETPLLH 713
E + LRE V+ P+ H
Sbjct: 503 EVKQDLREQVQYPVDH 518
Score = 70 (29.7 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 469 VEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
V E P+V + DIGG E + LRE V+ P+ H + F
Sbjct: 487 VVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKF 522
Score = 63 (27.2 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 1 MLELINQIHISQTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
M+EL + Q F +I +KP + G K + AVAN T A F + G E++
Sbjct: 237 MVEL--PLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMS 294
Query: 55 KYVGE 59
K GE
Sbjct: 295 KMAGE 299
Score = 56 (24.8 bits), Expect = 9.0e-19, Sum P(3) = 9.0e-19
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 275 AVANETGAFFFLINGPEIMSKMAGE 299
Score = 54 (24.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + AVAN A FI V G EL+ + GE
Sbjct: 543 KTMLAKAVANECAANFISVKGPELLSMWFGE 573
Score = 52 (23.4 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN A FI V G EL+ + GE
Sbjct: 549 AVANECAANFISVKGPELLSMWFGE 573
>FB|FBgn0036427 [details] [associations]
symbol:CG4613 species:7227 "Drosophila melanogaster"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS]
[GO:0006508 "proteolysis" evidence=IEA;NAS] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114
Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135
PROSITE:PS50240 SMART:SM00020 EMBL:AE014296 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HSSP:P00760
RefSeq:NP_648707.1 UniGene:Dm.27142 ProteinModelPortal:Q9VUF0
SMR:Q9VUF0 MEROPS:S01.B39 PRIDE:Q9VUF0 GeneID:39586
KEGG:dme:Dmel_CG4613 UCSC:CG4613-RA FlyBase:FBgn0036427
InParanoid:Q9VUF0 OMA:LDRSSTH OrthoDB:EOG4ZPCB0 PhylomeDB:Q9VUF0
GenomeRNAi:39586 NextBio:814401 ArrayExpress:Q9VUF0 Bgee:Q9VUF0
Uniprot:Q9VUF0
Length = 411
Score = 362 (132.5 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 80/197 (40%), Positives = 114/197 (57%)
Query: 185 CGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKD 244
CGVPN ++RIVGG N+YPW+ + + FCGGTLI+DRYVLTAAHCV +
Sbjct: 166 CGVPN-VNRIVGGTQVRTNKYPWIAQIIRGTFLFCGGTLINDRYVLTAAHCVHGMD-MRG 223
Query: 245 LIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVS 304
+ V + + +R++ + TR V H Y+ S HDIALL+LD P+ T+
Sbjct: 224 VSVRLLQLDRSSTHLGV--TRSVAFAHAHVGYDPV---SLVHDIALLRLDQPIPLVDTMR 278
Query: 305 PVCLPQLG-EKFTQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTG 363
P CLP + F + V GWG +E G +S L+ VP+++N +CR + + +
Sbjct: 279 PACLPSNWLQNFDFQKAIVAGWGLSQEGGSTSSVLQEVVVPIITNAQCRA-TSYRSMIVD 337
Query: 364 NMMCAGYVE-GGKDSCQ 379
MMCAGYV+ GG+D+CQ
Sbjct: 338 TMMCAGYVKTGGRDACQ 354
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 221 (82.9 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 320 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 379
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 380 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 432
Score = 201 (75.8 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 598 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 657
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ + LA++ +GA++ +C A AIR
Sbjct: 658 NLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 698
Score = 178 (67.7 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 482 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 541
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 542 GPELLTMWFGE 552
Score = 88 (36.0 bits), Expect = 5.1e-23, Sum P(3) = 5.1e-23
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 87 (35.7 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
++DL D ++ + V +D ++ + P + TV E P VT+ DIGG +
Sbjct: 427 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVV-----EVPQVTWEDIGGLE 481
Query: 698 EQIEKLREVVETPLLH 713
+ +L+E+V+ P+ H
Sbjct: 482 DVKRELQELVQYPVEH 497
Score = 82 (33.9 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 458 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 501
Score = 70 (29.7 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANR 65
G IAR AVAN T A F + G E++ K GEG A R
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGEGESACR 287
Score = 62 (26.9 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEG 86
AVAN T A F + G E++ K GEG
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGEG 282
Score = 54 (24.1 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 522 KTLLAKAIANECQANFISIKGPELLTMWFGE 552
Score = 51 (23.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 528 AIANECQANFISIKGPELLTMWFGE 552
Score = 43 (20.2 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 672 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 723
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 221 (82.9 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 326 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 385
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 386 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 438
Score = 201 (75.8 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 604 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 663
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ + LA++ +GA++ +C A AIR
Sbjct: 664 NLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 704
Score = 178 (67.7 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 488 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 547
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 548 GPELLTMWFGE 558
Score = 88 (36.0 bits), Expect = 5.3e-23, Sum P(3) = 5.3e-23
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 87 (35.7 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
++DL D ++ + V +D ++ + P + TV E P VT+ DIGG +
Sbjct: 433 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVV-----EVPQVTWEDIGGLE 487
Query: 698 EQIEKLREVVETPLLH 713
+ +L+E+V+ P+ H
Sbjct: 488 DVKRELQELVQYPVEH 503
Score = 82 (33.9 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 464 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 507
Score = 61 (26.5 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 528 KTLLAKAIANECQANFISIKGPELLTMWFGE 558
Score = 51 (23.0 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 534 AIANECQANFISIKGPELLTMWFGE 558
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 678 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 729
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 226 (84.6 bits), Expect = 4.1e-32, Sum P(3) = 4.1e-32
Identities = 46/118 (38%), Positives = 71/118 (60%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R VV L +DG R N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 343 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 402
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDFLEA 607
IH ++M + D+ E +A G+++ S+C+EA M IR + + ++D ++A
Sbjct: 403 SIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDA 460
Score = 183 (69.5 bits), Expect = 4.1e-32, Sum P(3) = 4.1e-32
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + P+ F ++GI+PP+G+L++GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 238 RELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMS 297
Query: 169 KYVGE 173
K GE
Sbjct: 298 KMAGE 302
Score = 170 (64.9 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 107 EVQRTMLELI----NQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
EV+R ++E + + PEKF G+ P +GVL +GPPGTGKT+ A+AVAN A FI V
Sbjct: 506 EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 565
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 566 GPELLSMWFGE 576
Score = 165 (63.1 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 43/115 (37%), Positives = 57/115 (49%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
D GG ++ VV L +DG + N+ V+ ATNRP+ LD AL+RPGRLD V
Sbjct: 614 DAGGASDR------VVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYV 667
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
LPD R I K R V D+ E +A +GA++ V A AI+
Sbjct: 668 PLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIK 722
Score = 89 (36.4 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 474 DVTYSDIGGCKEQIEKLREVVETPLLH 500
+V Y DIGGC++Q+ ++RE+VE PL H
Sbjct: 221 EVGYDDIGGCRKQMAQIRELVELPLRH 247
Score = 75 (31.5 bits), Expect = 4.1e-32, Sum P(3) = 4.1e-32
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
++DL + ++ + + V ++ +Y + + P + V E P+V + DIGG +
Sbjct: 450 LIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREVA----VVEVPNVRWEDIGGLE 505
Query: 698 EQIEKLREVVETPLLH 713
E +L E V+ P+ H
Sbjct: 506 EVKRELIESVQYPVDH 521
Score = 66 (28.3 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 469 VEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
V E P+V + DIGG +E +L E V+ P+ H + F G
Sbjct: 490 VVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFG 529
Score = 62 (26.9 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 12 QTFNNISVKPLD--IFNGH----KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
Q F +I +KP + G K + AVAN T A F + G E++ K GE
Sbjct: 249 QLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGE 302
Score = 56 (24.8 bits), Expect = 5.3e-19, Sum P(3) = 5.3e-19
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 278 AVANETGAFFFLINGPEIMSKMAGE 302
Score = 54 (24.1 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + AVAN A FI V G EL+ + GE
Sbjct: 546 KTMLAKAVANECAANFISVKGPELLSMWFGE 576
Score = 52 (23.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN A FI V G EL+ + GE
Sbjct: 552 AVANECAANFISVKGPELLSMWFGE 576
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 220 (82.5 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 45/125 (36%), Positives = 76/125 (60%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+++ G+PD GR +
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDFLEA-- 607
+IH ++M + D+ E +++ GA++ ++CTEA + IR + V E D ++A
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEI 444
Query: 608 VNKVA 612
+N +A
Sbjct: 445 LNSMA 449
Score = 195 (73.7 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 42/120 (35%), Positives = 66/120 (55%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + + + ++ ATNRPD +D AL+RPGRLD+ + LPD + R +IFK
Sbjct: 604 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKA 663
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNKVA 612
R + +D+ LA+ +GA+I +C A +AIR + EK+ + N A
Sbjct: 664 ALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEA 723
Score = 182 (69.1 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + P+ F ++G++PPKG+LL+GPPG+GKTL ARAVAN T A F + G E++
Sbjct: 220 RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMS 279
Query: 169 KYVGE 173
K GE
Sbjct: 280 KLAGE 284
Score = 171 (65.3 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 34/67 (50%), Positives = 43/67 (64%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q T+ + PEKF G+ P KGVL +GPPG GKTL A+A+AN A FI V G EL
Sbjct: 491 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 550
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 551 LTMWFGE 557
Score = 84 (34.6 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E DV Y D+GG ++Q+ ++RE+VE PL H
Sbjct: 199 ERLDDVGYDDVGGVRKQMAQIRELVELPLRH 229
Score = 82 (33.9 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+DL D +I M V N++ H L +P+ V E P+V+++DIGG +
Sbjct: 432 VIDLEDDSIDAEILNSMAV---TNEH-FHTALGNS-NPSALRETVVEVPNVSWNDIGGLE 486
Query: 698 EQIEKLREVVETPLLH 713
+L+E V+ P+ H
Sbjct: 487 NVKRELQETVQYPVEH 502
Score = 77 (32.2 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
+P+ V E P+V+++DIGG + +L+E V+ P+ H + F+ G
Sbjct: 463 NPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFG 510
Score = 67 (28.6 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 12 QTFNNISVKP---LDIF----NGHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
Q F +I VKP + ++ +G IAR AVAN T A F + G E++ K GE
Sbjct: 231 QLFKSIGVKPPKGILLYGPPGSGKTLIAR-AVANETGAFFFCINGPEIMSKLAGE 284
Score = 55 (24.4 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 260 AVANETGAFFFCINGPEIMSKLAGE 284
Score = 55 (24.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI V G EL+ + GE
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGE 557
Score = 52 (23.4 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI V G EL+ + GE
Sbjct: 533 AIANECQANFISVKGPELLTMWFGE 557
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 220 (82.5 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 45/125 (36%), Positives = 76/125 (60%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+++ G+PD GR +
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDFLEA-- 607
+IH ++M + D+ E +++ GA++ ++CTEA + IR + V E D ++A
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEI 444
Query: 608 VNKVA 612
+N +A
Sbjct: 445 LNSMA 449
Score = 193 (73.0 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 42/115 (36%), Positives = 66/115 (57%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
D GG +++ L ++ L +DG + + + ++ ATNRPD +D AL+RPGRLD+ +
Sbjct: 595 DAGGAADRV--LNQL----LTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYI 648
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
LPD + R +IFK R V +D+ LA+ +GA+I +C A +AIR
Sbjct: 649 PLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIR 703
Score = 182 (69.1 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + P+ F ++G++PPKG+LL+GPPG+GKTL ARAVAN T A F + G E++
Sbjct: 220 RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMS 279
Query: 169 KYVGE 173
K GE
Sbjct: 280 KLAGE 284
Score = 171 (65.3 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 34/67 (50%), Positives = 43/67 (64%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q T+ + PEKF G+ P KGVL +GPPG GKTL A+A+AN A FI V G EL
Sbjct: 491 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 550
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 551 LTMWFGE 557
Score = 82 (33.9 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+DL D +I M V N++ H L +P+ V E P+V++ DIGG +
Sbjct: 432 VIDLEDDSIDAEILNSMAVS---NEH-FHTALGNS-NPSALRETVVEVPNVSWEDIGGLE 486
Query: 698 EQIEKLREVVETPLLH 713
+L+E V+ P+ H
Sbjct: 487 NVKRELQETVQYPVEH 502
Score = 82 (33.9 bits), Expect = 9.2e-22, Sum P(3) = 9.2e-22
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 470 EEKPD-VTYSDIGGCKEQIEKLREVVETPLLH 500
EE+ D V Y D+GG ++Q+ ++RE+VE PL H
Sbjct: 198 EERLDEVGYDDVGGVRKQMAQIRELVELPLRH 229
Score = 76 (31.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
+P+ V E P+V++ DIGG + +L+E V+ P+ H + F+ G
Sbjct: 463 NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 510
Score = 67 (28.6 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 12 QTFNNISVKP---LDIF----NGHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
Q F +I VKP + ++ +G IAR AVAN T A F + G E++ K GE
Sbjct: 231 QLFKSIGVKPPKGILLYGPPGSGKTLIAR-AVANETGAFFFCINGPEIMSKLAGE 284
Score = 55 (24.4 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 260 AVANETGAFFFCINGPEIMSKLAGE 284
Score = 55 (24.4 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI V G EL+ + GE
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGE 557
Score = 52 (23.4 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI V G EL+ + GE
Sbjct: 533 AIANECQANFISVKGPELLTMWFGE 557
>ZFIN|ZDB-GENE-070720-11 [details] [associations]
symbol:zgc:165423 "zgc:165423" species:7955 "Danio
rerio" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020
ZFIN:ZDB-GENE-070720-11 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494
eggNOG:COG5640 MEROPS:S01.146 OrthoDB:EOG45TCNS EMBL:BC133112
IPI:IPI00860182 UniGene:Dr.36345 ProteinModelPortal:A3KMS5
HOGENOM:HOG000170226 HOVERGEN:HBG099202 InParanoid:A3KMS5
Uniprot:A3KMS5
Length = 542
Score = 373 (136.4 bits), Expect = 4.6e-32, P = 4.6e-32
Identities = 77/211 (36%), Positives = 117/211 (55%)
Query: 185 CGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKD 244
CG +IVGG +PW +L ++G FCGG+LISD+++L+AAHC S+ D
Sbjct: 33 CGKAPLNTKIVGGTNASAGSWPWQASLHESGSHFCGGSLISDQWILSAAHCFPSNPNPSD 92
Query: 245 LIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVS 304
V + ++ ++ ++ V +V+ HP Y QG+ +HD+D+ALL L +P+ F +
Sbjct: 93 YTVYLGRQSQDLPNPNEV-SKSVSQVIVHPLY--QGS-THDNDMALLHLSSPVTFSNYIQ 148
Query: 305 PVCLPQLGEKFTQRTGTVVGWGRVEESGQIASD--LRATQVPVMSNQECRQFPGFEAKLT 362
PVCL G F T + GWG +E + S L+ VP++ N C G + +T
Sbjct: 149 PVCLAADGSTFYNDTMWITGWGTIESGVSLPSPQILQEVNVPIVGNNLCNCLYGGGSSIT 208
Query: 363 GNMMCAGYVEGGKDSCQVTLDEADIALLKSY 393
NMMCAG ++GGKDSCQ D ++KS+
Sbjct: 209 NNMMCAGLMQGGKDSCQG--DSGGPMVIKSF 237
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 226 (84.6 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 54/127 (42%), Positives = 76/127 (59%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF-GL 540
G +++++ ++E L +DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF L
Sbjct: 287 GSDREVQRI--LIEL-LTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSL 343
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
D R IF A MS+ + + L + +GA I ++ EAG+ A+R R V
Sbjct: 344 RDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVIL 403
Query: 601 EKDFLEA 607
+ D EA
Sbjct: 404 QSDLEEA 410
Score = 193 (73.0 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + Q + + +GI+PP+GVLL+GPPGTGKT+ +AVAN T A FIRV GSE V
Sbjct: 185 REAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVH 244
Query: 169 KYVGE 173
KY+GE
Sbjct: 245 KYLGE 249
Score = 157 (60.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 59/201 (29%), Positives = 94/201 (46%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I++V I ++ +++ TGI S TG++ T D++ L+ + +H
Sbjct: 87 KRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNAL 146
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP D ++++M EKPDVTY+D+GG Q +++RE VE PL+ D G DP
Sbjct: 147 VDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPP 206
Query: 507 RGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFE 566
RG VL+ P T L++ K F + G + K + RD+ F
Sbjct: 207 RG---VLLY-GPPGTGKTMLVKAVANSTKAAF--IRVNGSEFVHKYLGEGPRMVRDV-FR 259
Query: 567 LLARLCPNSTGA-EIRSVCTE 586
L P+ E+ S+ T+
Sbjct: 260 LARENAPSIIFIDEVDSIATK 280
Score = 130 (50.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 637 FVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGC 696
+VV + ++ ++ M V + R+ + LPP D ++++M EKPDVTY+D+GG
Sbjct: 118 YVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGL 177
Query: 697 KEQIEKLREVVETPLL 712
Q +++RE VE PL+
Sbjct: 178 DMQKQEIREAVELPLV 193
Score = 102 (41.0 bits), Expect = 8.6e-22, Sum P(2) = 8.6e-22
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
AVAN T A FIRV GSE V KY+GEG RM+
Sbjct: 225 AVANSTKAAFIRVNGSEFVHKYLGEGPRMV 254
Score = 38 (18.4 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 379 QVTLDEA-DIALLKSYGQGQYTKSIKAVEDDIQAVIKRVN 417
Q+ +D + L G G+ T +KAV + +A RVN
Sbjct: 200 QIGIDPPRGVLLYGPPGTGK-TMLVKAVANSTKAAFIRVN 238
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 222 (83.2 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 57/129 (44%), Positives = 78/129 (60%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF-GL 540
G +++++ ++E L +DGFD +KV+MATNR DTLDPAL+RPGRLDRK+EF L
Sbjct: 270 GADREVQRI--LLEL-LNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSL 326
Query: 541 PDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 598
D R IF A MS+ E D+ L+ R P S GA I ++ EAG+ A+R R +
Sbjct: 327 KDRRERRLIFSTIASKMSLAPEADLD-SLIIRNDPLS-GAVIAAIMQEAGLRAVRKNRYM 384
Query: 599 ASEKDFLEA 607
+ D EA
Sbjct: 385 ILQSDLEEA 393
Score = 195 (73.7 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 37/62 (59%), Positives = 49/62 (79%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + Q + + +GI+PP+GVLL+GPPGTGKT+ +AVAN T A FIR+ GSE VQKY+
Sbjct: 171 VELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYL 230
Query: 172 GE 173
GE
Sbjct: 231 GE 232
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K IK+V I ++ ++E TGI S TG T D++ L+ + +H
Sbjct: 70 KRIKSVPLVIGQFLEPIDENTGIVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNAL 129
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D +++++ ++KPDVTY+D+GG Q ++++E VE PL D G DP
Sbjct: 130 VDILPPEADSSISIVGEDQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPP 189
Query: 507 RG 508
RG
Sbjct: 190 RG 191
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 24/84 (28%), Positives = 50/84 (59%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ + +VV + ++ ++ V + R+ + LPP+ D +++++ ++KPD
Sbjct: 92 IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPD 151
Query: 688 VTYSDIGGCKEQIEKLREVVETPL 711
VTY+D+GG Q ++++E VE PL
Sbjct: 152 VTYADVGGLDMQKQEIKEAVELPL 175
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 222 (83.2 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 57/129 (44%), Positives = 78/129 (60%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF-GL 540
G +++++ ++E L +DGFD +KV+MATNR DTLDPAL+RPGRLDRK+EF L
Sbjct: 270 GADREVQRI--LLEL-LNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSL 326
Query: 541 PDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 598
D R IF A MS+ E D+ L+ R P S GA I ++ EAG+ A+R R +
Sbjct: 327 KDRRERRLIFSTIASKMSLAPEADLD-SLIIRNDPLS-GAVIAAIMQEAGLRAVRKNRYM 384
Query: 599 ASEKDFLEA 607
+ D EA
Sbjct: 385 ILQSDLEEA 393
Score = 195 (73.7 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 37/62 (59%), Positives = 49/62 (79%)
Query: 113 LEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+EL + Q + + +GI+PP+GVLL+GPPGTGKT+ +AVAN T A FIR+ GSE VQKY+
Sbjct: 171 VELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYL 230
Query: 172 GE 173
GE
Sbjct: 231 GE 232
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K IK+V I ++ ++E TGI S TG T D++ L+ + +H
Sbjct: 70 KRIKSVPLVIGQFLEPIDENTGIVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNAL 129
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D +++++ ++KPDVTY+D+GG Q ++++E VE PL D G DP
Sbjct: 130 VDILPPEADSSISIVGEDQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPP 189
Query: 507 RG 508
RG
Sbjct: 190 RG 191
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 24/84 (28%), Positives = 50/84 (59%)
Query: 628 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 687
I++ + +VV + ++ ++ V + R+ + LPP+ D +++++ ++KPD
Sbjct: 92 IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPD 151
Query: 688 VTYSDIGGCKEQIEKLREVVETPL 711
VTY+D+GG Q ++++E VE PL
Sbjct: 152 VTYADVGGLDMQKQEIKEAVELPL 175
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 214 (80.4 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG ++ V+ ATNRP+++DPAL R GR DR+++ G+PD GR +
Sbjct: 319 RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVL 378
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDFLEA 607
+IH ++M + D+ E +A GA++ S+C+EA + IR + + E D ++A
Sbjct: 379 RIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDA 436
Score = 195 (73.7 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 47/162 (29%), Positives = 82/162 (50%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 597 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKA 656
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA--RRKVASEKDFLEAVNK 610
+ R + +++ +A++ +GA++ +C A AIR ++ EK+ E N
Sbjct: 657 NLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNS 716
Query: 611 VARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEE 652
++ D ++P I F + + SV+ DI +
Sbjct: 717 A------MDMDEDDPVPEITSAHFEEAMKFARRSVSDNDIRK 752
Score = 177 (67.4 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+L++GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 214 KEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 273
Query: 169 KYVGE 173
K GE
Sbjct: 274 KLAGE 278
Score = 164 (62.8 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q + + P+KF+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL
Sbjct: 485 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 544
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 545 LTMWFGE 551
Score = 89 (36.4 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
DP + E V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 184 DPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRH 223
Score = 84 (34.6 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
++DL D ++ + V ++ +Y + K P+ V E P+ T++DIGG +
Sbjct: 426 LIDLEDDKIDAEVLASLAVTMENFRYAM-----TKSSPSALRETVVEVPNTTWTDIGGLE 480
Query: 698 EQIEKLREVVETPLLH 713
++L+E+V+ P+ H
Sbjct: 481 SVKKELQELVQYPVEH 496
Score = 81 (33.6 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
K P+ V E P+ T++DIGG + ++L+E+V+ P+ H D F
Sbjct: 455 KSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKF 500
Score = 61 (26.5 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 247 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 278
Score = 57 (25.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTD 67
K + A+AN A FI V G EL+ + GE AN D
Sbjct: 521 KTLLAKAIANECQANFISVKGPELLTMWFGESE-ANVRD 558
Score = 56 (24.8 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 254 AVANETGAFFFLINGPEIMSKLAGE 278
Score = 52 (23.4 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI V G EL+ + GE
Sbjct: 527 AIANECQANFISVKGPELLTMWFGE 551
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 231 (86.4 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 52/135 (38%), Positives = 82/135 (60%)
Query: 477 YSDIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 536
Y G + +I+ R ++E L LDGFD RG++KV+MATNR TLDPAL L ++
Sbjct: 293 YDSNSGGEREIQ--RTMLEL-LNQLDGFDSRGDVKVIMATNRIKTLDPALSHQAALTGRL 349
Query: 537 EFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 596
LPD + + HIF+IH M++ D+ +L+ + +GA+I+++CTEAG+ A+R R
Sbjct: 350 S-PLPDEKTKKHIFQIHTSRMTLADDVTLDLIMAK-DDLSGADIKAICTEAGLMALREHR 407
Query: 597 KVASEKDFLEAVNKV 611
+ +DF ++ V
Sbjct: 408 MKVTNEDFKKSKENV 422
Score = 186 (70.5 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 106 NEVQ--RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
N++Q + LEL + PE + +GI+PPKGV+L+GPPGT K AVANRT A F+RV
Sbjct: 195 NQIQEIKESLELPLTHPENYEEMGIKPPKGVILYGPPGTVK-----AVANRTSATFLRVA 249
Query: 163 GSELVQKYVGE 173
GSEL+QKY+G+
Sbjct: 250 GSELIQKYLGD 260
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 39/117 (33%), Positives = 55/117 (47%)
Query: 12 QTFNNISVKPLD--IFNGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTDAC 69
+ + + +KP I G + AVANRT A F+RV GSEL+QKY+G+G R
Sbjct: 212 ENYEEMGIKPPKGVILYGPPGTVK-AVANRTSATFLRVAGSELIQKYLGDGPKVVRESFR 270
Query: 70 FIRVIGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELINQPEKFVNLG 126
+V ++ E I E+QRTMLEL+NQ + F + G
Sbjct: 271 VAEEHAPSIV--FIDE----IDAIGTRRYDSNSGGEREIQRTMLELLNQLDGFDSRG 321
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 267 (99.0 bits), Expect = 5.0e-31, Sum P(2) = 5.0e-31
Identities = 55/131 (41%), Positives = 83/131 (63%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ I V+ ATNRPD LDPAL+RPGR DR+V GL
Sbjct: 266 GGHDEREQTLNQM----LVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGL 321
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I K+H R + + DI ++AR P +GA++ ++ EA +FA R ++V S
Sbjct: 322 PDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVS 381
Query: 601 EKDFLEAVNKV 611
+F +A +K+
Sbjct: 382 MVEFEKAKDKI 392
Score = 155 (59.6 bits), Expect = 5.0e-31, Sum P(2) = 5.0e-31
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 87 ARMIXXXXXXXXXXXXXXXNEVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGK 143
ARM+ +E + + EL+ +P +F LG + PKGVL+ GPPGTGK
Sbjct: 139 ARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGK 198
Query: 144 TLCARAVANRTDACFIRVIGSELVQKYVG 172
TL A+A+A F + GS+ V+ +VG
Sbjct: 199 TLLAKAIAGEAKVPFFTISGSDFVEMFVG 227
Score = 54 (24.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GS+ V+ +VG GA
Sbjct: 198 KTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGA 230
Score = 52 (23.4 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
A+A F + GS+ V+ +VG GA +
Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRV 233
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 213 (80.0 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 41/113 (36%), Positives = 68/113 (60%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+++ G+PD GR +
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 385
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +++ GA++ ++CTEA + IR + V D
Sbjct: 386 RIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438
Score = 210 (79.0 bits), Expect = 3.6e-28, Sum P(3) = 3.6e-28
Identities = 57/174 (32%), Positives = 87/174 (50%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
D GG +++ L ++ L +DG + + + ++ ATNRPD +DPAL+RPGRLD+ +
Sbjct: 596 DAGGAADRV--LNQL----LTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 649
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 598
LPD E R IFK R V +D+ LA+ +GA+I +C + +AIR
Sbjct: 650 PLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIREN--- 706
Query: 599 ASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEE 652
EKD +E K A + + D E I F + + SV+ DI +
Sbjct: 707 -IEKD-IEKERKRAESPEAMEEDEEEIAEI-KAGHFEESMKYARRSVSDADIRK 757
Score = 182 (69.1 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + P+ F ++G++PPKG+LL+GPPG+GKTL ARAVAN T A F + G E++
Sbjct: 221 RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMS 280
Query: 169 KYVGE 173
K GE
Sbjct: 281 KLAGE 285
Score = 170 (64.9 bits), Expect = 3.6e-28, Sum P(3) = 3.6e-28
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q T+ + PEKF G+ P KGVL +GPPG GKTL A+A+AN A FI + G EL
Sbjct: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 551
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 552 LTMWFGE 558
Score = 82 (33.9 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 470 EEKPD-VTYSDIGGCKEQIEKLREVVETPLLH 500
EE+ D V Y D+GG ++Q+ ++RE+VE PL H
Sbjct: 199 EERLDEVGYDDVGGVRKQMAQIRELVELPLRH 230
Score = 79 (32.9 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+DL D +I M V D +Q + +P+ V E P+V++ DIGG +
Sbjct: 433 VIDLDDEEIDAEILNSMAVSNDH--FQTALG---NSNPSALRETVVEVPNVSWEDIGGLE 487
Query: 698 EQIEKLREVVETPLLH 713
+L+E V+ P+ H
Sbjct: 488 NVKRELQETVQYPVEH 503
Score = 76 (31.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGFDPRG 508
+P+ V E P+V++ DIGG + +L+E V+ P+ H + F+ G
Sbjct: 464 NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 511
Score = 67 (28.6 bits), Expect = 3.6e-28, Sum P(3) = 3.6e-28
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 12 QTFNNISVKP---LDIF----NGHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
Q F +I VKP + ++ +G IAR AVAN T A F + G E++ K GE
Sbjct: 232 QLFKSIGVKPPKGILLYGPPGSGKTLIAR-AVANETGAFFFCINGPEIMSKLAGE 285
Score = 55 (24.4 bits), Expect = 6.8e-18, Sum P(3) = 6.8e-18
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 261 AVANETGAFFFCINGPEIMSKLAGE 285
Score = 54 (24.1 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 528 KTLLAKAIANECQANFISIKGPELLTMWFGE 558
Score = 51 (23.0 bits), Expect = 6.2e-16, Sum P(3) = 6.2e-16
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 534 AIANECQANFISIKGPELLTMWFGE 558
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 268 (99.4 bits), Expect = 8.1e-31, Sum P(2) = 8.1e-31
Identities = 55/146 (37%), Positives = 90/146 (61%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ + I V+ ATNRPD LDPAL+RPGR DR+V L
Sbjct: 270 GGHDEREQTLNQL----LVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPL 325
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD++GR +I K+H + + +D++ ++AR P +GA++ ++ EA +FA R +K S
Sbjct: 326 PDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAARENKKDVS 385
Query: 601 EKDFLEAVNKV---ARCTKIINADSE 623
+F A +K+ A ++ +D E
Sbjct: 386 MSEFERAKDKIMMGAERRSMVMSDDE 411
Score = 152 (58.6 bits), Expect = 8.1e-31, Sum P(2) = 8.1e-31
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E + ++E + P KF LG + P GVLL GPPGTGKTL A+AVA F + GS+
Sbjct: 166 EEVKELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGEAKVPFFTISGSDF 225
Query: 167 VQKYVG 172
V+ +VG
Sbjct: 226 VEMFVG 231
Score = 59 (25.8 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 43 CFIRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGARMI 90
C + ++G K + AVA F + GS+ V+ +VG GA +
Sbjct: 190 CGVLLVGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRV 237
Score = 55 (24.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + AVA F + GS+ V+ +VG GA
Sbjct: 202 KTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGA 234
Score = 52 (23.4 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVE 495
+++ VT+ D+ G E E+++E+VE
Sbjct: 148 QDQVKVTFDDVAGVDEAKEEVKELVE 173
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 279 (103.3 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 59/137 (43%), Positives = 84/137 (61%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+ GG EQ L ++ L+ +DGF+ N+ VL TNRPD LDPALMRPGR DR++
Sbjct: 415 NFGGQSEQENTLNQL----LVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYI 470
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLAR----LCPNSTGAEIRSVCTEAGMFAIRA 594
G PD++GR IFK+H R + +E ++ E LAR L P +GA+I +VC EA + A R
Sbjct: 471 GPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARH 530
Query: 595 RRKVASEKDFLEAVNKV 611
++K F +A+ +V
Sbjct: 531 LSDAINQKHFEQAIERV 547
Score = 149 (57.5 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 163
E + ++E +N P+++ +LG + PKG +L GPPGTGKTL A+A A + FI V G
Sbjct: 310 EAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNG 369
Query: 164 SELVQKYVG 172
SE ++ +VG
Sbjct: 370 SEFLEMFVG 378
Score = 54 (24.1 bits), Expect = 7.5e-21, Sum P(3) = 7.5e-21
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 1 MLELINQIHISQTFNNISVK-PLD-IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
++E +N + + + ++ K P I G K + A A + FI V GSE ++
Sbjct: 315 IMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLE 374
Query: 55 KYVGEG 60
+VG G
Sbjct: 375 MFVGVG 380
Score = 51 (23.0 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEG-ARM 89
A A + FI V GSE ++ +VG G AR+
Sbjct: 355 ATAGEANVPFITVNGSEFLEMFVGVGPARV 384
Score = 39 (18.8 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 313 EKFTQRT-GTVVGWGRVEESGQIASDL 338
+K TQ +V +G E+ GQ++ DL
Sbjct: 646 KKVTQSAYAQIVQFGMNEKVGQVSFDL 672
Score = 37 (18.1 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 673 IDPTVTMMQVEEKPDVTYSDIG 694
++ ++Q EEK V Y + G
Sbjct: 551 LEKKTQVLQPEEKKTVAYHEAG 572
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIG 481
++ ++Q EEK V Y + G
Sbjct: 551 LEKKTQVLQPEEKKTVAYHEAG 572
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 220 (82.5 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 54/128 (42%), Positives = 78/128 (60%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF-GL 540
G +++++ ++E L +DGF+ N+KV+MATNR DTLDPAL+RPGRLDRK+EF L
Sbjct: 281 GADREVQRI--LLEL-LNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSL 337
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA 599
D R IF A MS+ ++ + L+ R P S GA I ++ EAG+ A+R R
Sbjct: 338 RDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLS-GAVIAAIMQEAGLRAVRKNRYNI 396
Query: 600 SEKDFLEA 607
+ D +A
Sbjct: 397 IQSDLEDA 404
Score = 192 (72.6 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R +EL + + + +GI+PP+GVLL+GPPGTGKT+ +AVAN T A FIRV GSE VQ
Sbjct: 179 REAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQ 238
Query: 169 KYVGE 173
KY+GE
Sbjct: 239 KYLGE 243
Score = 159 (61.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 43/122 (35%), Positives = 65/122 (53%)
Query: 400 KSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPALWDLTADKQTLQNEQPLQIHIP---- 455
K I++V I ++ +++ TGI +S TG T D++ L+ + +H
Sbjct: 81 KRIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNAL 140
Query: 456 ---LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLD-----GFDP- 506
LPP+ D ++ M+ EKPDVTY+D+GG Q +++RE VE PL H D G DP
Sbjct: 141 VDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPP 200
Query: 507 RG 508
RG
Sbjct: 201 RG 202
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 32/120 (26%), Positives = 63/120 (52%)
Query: 595 RRKVASEKDFLEAVNKVARCT-KIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEEG 653
+R++ ++ ++ + V + + A +N I+ + +VV + ++ ++
Sbjct: 70 KRELVRAQEEIKRIQSVPLVIGQFMEAIDQNTG-IVQSSTGSNYVVRILSTLDREKLKPS 128
Query: 654 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V + R+ + LPP+ D ++ M+ EKPDVTY+D+GG Q +++RE VE PL H
Sbjct: 129 SSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTH 188
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 224 (83.9 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 47/130 (36%), Positives = 79/130 (60%)
Query: 486 QIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEG 545
++EK +V L +DG R ++ V+ ATNRP+++D AL R GR DR+++ G+PD G
Sbjct: 324 EVEK--RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 546 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDF 604
R I +IH ++M + D+ E +A C GA++ S+C+EA + IR + ++ E D
Sbjct: 382 RLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDT 441
Query: 605 LEA--VNKVA 612
++A +N +A
Sbjct: 442 IDAEVLNSLA 451
Score = 208 (78.3 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 51/162 (31%), Positives = 82/162 (50%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD R IFK
Sbjct: 605 VINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKA 664
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA--RRKVASEKDFLEAVNK 610
R + D+ LA+ +GA++ +C A AIR R++ EK E ++
Sbjct: 665 SLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEK---ERQDR 721
Query: 611 VARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEE 652
AR +++ + +P I F + + SV DI +
Sbjct: 722 SARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDIRK 763
Score = 182 (69.1 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P+ F +G++PP+G+LLFGPPGTGKTL ARAVAN T A F + G E++
Sbjct: 222 KEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMS 281
Query: 169 KYVGE 173
K GE
Sbjct: 282 KMSGE 286
Score = 163 (62.4 bits), Expect = 3.9e-27, Sum P(3) = 3.9e-27
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q + + PEK++ G++P +GVL +GPPG GKTL A+A+AN A FI + G EL
Sbjct: 493 ELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 552
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 553 LTMWFGE 559
Score = 87 (35.7 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 27/119 (22%), Positives = 55/119 (46%)
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFV--VDLADSVAPTDIEEGM 654
K+ + D + N+ C + AD + ++Q + + +DL D ++ +
Sbjct: 394 KLGEDVDLEQVANE---CHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSL 450
Query: 655 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V ++ ++ + K P+ V E P+ T+SDIGG + +L+E+V+ P+ H
Sbjct: 451 AVTMENFRFAMG-----KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEH 504
Score = 80 (33.2 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
DP + E +V Y D+GG ++Q+ +++E+VE PL H
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRH 231
Score = 77 (32.2 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
K P+ V E P+ T+SDIGG + +L+E+V+ P+ H
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEH 504
Score = 66 (28.3 bits), Expect = 3.9e-27, Sum P(3) = 3.9e-27
Identities = 26/66 (39%), Positives = 33/66 (50%)
Query: 1 MLELINQIHISQTFNNISVKP---LDIFN----GHKNIARGAVANRTDACFIRVIGSELV 53
M+EL + Q F I VKP + +F G IAR AVAN T A F + G E++
Sbjct: 224 MVEL--PLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIAR-AVANETGAFFFLINGPEIM 280
Query: 54 QKYVGE 59
K GE
Sbjct: 281 SKMSGE 286
Score = 56 (24.8 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTD 67
K + A+AN A FI + G EL+ + GE AN D
Sbjct: 529 KTLLAKAIANECQANFISIKGPELLTMWFGESE-ANVRD 566
Score = 54 (24.1 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 262 AVANETGAFFFLINGPEIMSKMSGE 286
Score = 51 (23.0 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 535 AIANECQANFISIKGPELLTMWFGE 559
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 224 (83.9 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 47/130 (36%), Positives = 79/130 (60%)
Query: 486 QIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEG 545
++EK +V L +DG R ++ V+ ATNRP+++D AL R GR DR+++ G+PD G
Sbjct: 324 EVEK--RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 546 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDF 604
R I +IH ++M + D+ E +A C GA++ S+C+EA + IR + ++ E D
Sbjct: 382 RLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDT 441
Query: 605 LEA--VNKVA 612
++A +N +A
Sbjct: 442 IDAEVLNSLA 451
Score = 208 (78.3 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 51/162 (31%), Positives = 82/162 (50%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD R IFK
Sbjct: 605 VINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKA 664
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA--RRKVASEKDFLEAVNK 610
R + D+ LA+ +GA++ +C A AIR R++ EK E ++
Sbjct: 665 SLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEK---ERQDR 721
Query: 611 VARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEE 652
AR +++ + +P I F + + SV DI +
Sbjct: 722 SARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDIRK 763
Score = 182 (69.1 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P+ F +G++PP+G+LLFGPPGTGKTL ARAVAN T A F + G E++
Sbjct: 222 KEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMS 281
Query: 169 KYVGE 173
K GE
Sbjct: 282 KMSGE 286
Score = 163 (62.4 bits), Expect = 3.9e-27, Sum P(3) = 3.9e-27
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q + + PEK++ G++P +GVL +GPPG GKTL A+A+AN A FI + G EL
Sbjct: 493 ELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 552
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 553 LTMWFGE 559
Score = 87 (35.7 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 27/119 (22%), Positives = 55/119 (46%)
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFV--VDLADSVAPTDIEEGM 654
K+ + D + N+ C + AD + ++Q + + +DL D ++ +
Sbjct: 394 KLGEDVDLEQVANE---CHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSL 450
Query: 655 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V ++ ++ + K P+ V E P+ T+SDIGG + +L+E+V+ P+ H
Sbjct: 451 AVTMENFRFAMG-----KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEH 504
Score = 80 (33.2 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
DP + E +V Y D+GG ++Q+ +++E+VE PL H
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRH 231
Score = 77 (32.2 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
K P+ V E P+ T+SDIGG + +L+E+V+ P+ H
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEH 504
Score = 66 (28.3 bits), Expect = 3.9e-27, Sum P(3) = 3.9e-27
Identities = 26/66 (39%), Positives = 33/66 (50%)
Query: 1 MLELINQIHISQTFNNISVKP---LDIFN----GHKNIARGAVANRTDACFIRVIGSELV 53
M+EL + Q F I VKP + +F G IAR AVAN T A F + G E++
Sbjct: 224 MVEL--PLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIAR-AVANETGAFFFLINGPEIM 280
Query: 54 QKYVGE 59
K GE
Sbjct: 281 SKMSGE 286
Score = 56 (24.8 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTD 67
K + A+AN A FI + G EL+ + GE AN D
Sbjct: 529 KTLLAKAIANECQANFISIKGPELLTMWFGESE-ANVRD 566
Score = 54 (24.1 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 262 AVANETGAFFFLINGPEIMSKMSGE 286
Score = 51 (23.0 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 535 AIANECQANFISIKGPELLTMWFGE 559
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 271 (100.5 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 59/136 (43%), Positives = 81/136 (59%)
Query: 480 IGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFG 539
+GG EQ L ++ L+ +DGF+ N+ VL TNRPD LDPAL RPGR DR++ G
Sbjct: 385 LGGQSEQENTLNQM----LVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIG 440
Query: 540 LPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 595
PD++GR+ IFK+H R + S+ RD LA L P TGA+I +VC EA + A R
Sbjct: 441 PPDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNEAALIAARHL 500
Query: 596 RKVASEKDFLEAVNKV 611
E+ F +A+ +V
Sbjct: 501 SPSVQERHFEQAIERV 516
Score = 148 (57.2 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 34/93 (36%), Positives = 48/93 (51%)
Query: 83 VGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPP 139
VGE I E + ++E +N P+++ +LG + PKG +L GPP
Sbjct: 255 VGETTAKILKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPP 314
Query: 140 GTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
GTGKTL A+A A FI V GSE ++ +VG
Sbjct: 315 GTGKTLLAKATAGEAKVPFITVNGSEFLEMFVG 347
Score = 51 (23.0 bits), Expect = 3.5e-20, Sum P(3) = 3.5e-20
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEG 60
K + A A FI V GSE ++ +VG G
Sbjct: 318 KTLLAKATAGEAKVPFITVNGSEFLEMFVGVG 349
Score = 49 (22.3 bits), Expect = 5.7e-20, Sum P(3) = 5.7e-20
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEG-ARM 89
A A FI V GSE ++ +VG G AR+
Sbjct: 324 ATAGEAKVPFITVNGSEFLEMFVGVGPARV 353
Score = 41 (19.5 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 696 CKEQIEKL-REVVETPLL 712
C+EQ+EK+ R ++E +L
Sbjct: 683 CREQVEKVGRRLLEKEVL 700
Score = 41 (19.5 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 483 CKEQIEKL-REVVETPLL 499
C+EQ+EK+ R ++E +L
Sbjct: 683 CREQVEKVGRRLLEKEVL 700
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 267 (99.0 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 53/131 (40%), Positives = 82/131 (62%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ I V+ ATNRPD LD AL+RPGR DR+V GL
Sbjct: 271 GGHDEREQTLNQM----LVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGL 326
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I K+H R + + D++ ++AR P +GA++ ++ EA +FA R R+V
Sbjct: 327 PDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNRRVVG 386
Query: 601 EKDFLEAVNKV 611
++F A +K+
Sbjct: 387 MEEFERAKDKI 397
Score = 147 (56.8 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E + +++ + P KF LG P GVL+ GPPGTGKTL A+A+A + F + GS+
Sbjct: 167 EEVKELVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGESKVPFFTISGSDF 226
Query: 167 VQKYVG 172
V+ +VG
Sbjct: 227 VEMFVG 232
Score = 55 (24.4 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A + F + GS+ V+ +VG GA
Sbjct: 203 KTLLAKAIAGESKVPFFTISGSDFVEMFVGVGA 235
Score = 53 (23.7 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
A+A + F + GS+ V+ +VG GA +
Sbjct: 209 AIAGESKVPFFTISGSDFVEMFVGVGASRV 238
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 269 (99.8 bits), Expect = 4.4e-30, Sum P(3) = 4.4e-30
Identities = 58/136 (42%), Positives = 81/136 (59%)
Query: 480 IGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFG 539
+GG EQ L ++ L+ +DGF+ N+ VL TNRPD LDPAL RPGR DR++ G
Sbjct: 413 LGGQSEQENTLNQM----LVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIG 468
Query: 540 LPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 595
PD++GR+ IFK+H R + S+ +D LA L P TGA+I +VC EA + A R
Sbjct: 469 PPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHL 528
Query: 596 RKVASEKDFLEAVNKV 611
E+ F +A+ +V
Sbjct: 529 SPSVQERHFEQAIERV 544
Score = 150 (57.9 bits), Expect = 4.4e-30, Sum P(3) = 4.4e-30
Identities = 34/93 (36%), Positives = 49/93 (52%)
Query: 83 VGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPP 139
VGE I E + ++E +N P+++ +LG + PKG +L GPP
Sbjct: 283 VGETTAKILKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPP 342
Query: 140 GTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
GTGKTL A+A A + FI V GSE ++ +VG
Sbjct: 343 GTGKTLLAKATAGEANVPFITVNGSEFLEMFVG 375
Score = 53 (23.7 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEG 60
K + A A + FI V GSE ++ +VG G
Sbjct: 346 KTLLAKATAGEANVPFITVNGSEFLEMFVGVG 377
Score = 51 (23.0 bits), Expect = 7.3e-20, Sum P(3) = 7.3e-20
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEG-ARM 89
A A + FI V GSE ++ +VG G AR+
Sbjct: 352 ATAGEANVPFITVNGSEFLEMFVGVGPARV 381
Score = 41 (19.5 bits), Expect = 4.4e-30, Sum P(3) = 4.4e-30
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 696 CKEQIEKL-REVVETPLL 712
C+EQ+EK+ R ++E +L
Sbjct: 711 CREQVEKVGRRLLEKEVL 728
Score = 41 (19.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 483 CKEQIEKL-REVVETPLL 499
C+EQ+EK+ R ++E +L
Sbjct: 711 CREQVEKVGRRLLEKEVL 728
>UNIPROTKB|G1K2D7 [details] [associations]
symbol:F9 "Coagulation factor IX" species:9615 "Canis lupus
familiaris" [GO:0007596 "blood coagulation" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] InterPro:IPR000294 InterPro:IPR000742
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR001881
InterPro:IPR009003 InterPro:IPR012224 InterPro:IPR018097
InterPro:IPR018114 Pfam:PF00008 Pfam:PF00089 Pfam:PF00594
PIRSF:PIRSF001143 PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50240 PROSITE:PS50998 SMART:SM00020 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0007596 GO:GO:0006508 GO:GO:0005509 GO:GO:0004252
InterPro:IPR013032 PROSITE:PS00022 SUPFAM:SSF50494 PROSITE:PS01186
PROSITE:PS00010 GeneTree:ENSGT00560000076714 Gene3D:4.10.740.10
InterPro:IPR017857 SUPFAM:SSF57630 OMA:SAECTVF EMBL:AAEX03026964
Ensembl:ENSCAFT00000030166 Uniprot:G1K2D7
Length = 459
Score = 340 (124.7 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 74/194 (38%), Positives = 111/194 (57%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
N R+VGG + ++PW V L FCGG++I++++V+TAAHC+ + + +V
Sbjct: 220 NDFTRVVGGKDAKPGQFPWQVLLNGKVDAFCGGSIINEKWVVTAAHCIEPDVK---ITIV 276
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EHN T+ + R V++ + H YNA K ++HDIALL+LD PL V+P+C+
Sbjct: 277 AGEHNTEKREHTE-QKRNVIRTILHHSYNATINK-YNHDIALLELDEPLTLNSYVTPICI 334
Query: 309 P--QLGEKFTQ-RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTGNM 365
+ F + +G V GWGRV G+ AS L+ +VP++ C + F + NM
Sbjct: 335 ADREYSNIFLKFGSGYVSGWGRVFNKGRSASILQYLKVPLVDRATCLRSTKFT--IYNNM 392
Query: 366 MCAGYVEGGKDSCQ 379
CAG+ EGGKDSCQ
Sbjct: 393 FCAGFHEGGKDSCQ 406
>UNIPROTKB|P19540 [details] [associations]
symbol:F9 "Coagulation factor IX" species:9615 "Canis lupus
familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] InterPro:IPR000294 InterPro:IPR000742
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR001881
InterPro:IPR009003 InterPro:IPR012224 InterPro:IPR018097
InterPro:IPR018114 Pfam:PF00008 Pfam:PF00089 Pfam:PF00594
PIRSF:PIRSF001143 PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50240 PROSITE:PS50998 SMART:SM00020 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0007596 GO:GO:0006508 GO:GO:0005509 GO:GO:0004252
InterPro:IPR013032 PROSITE:PS00022 SUPFAM:SSF50494 eggNOG:COG5640
HOVERGEN:HBG013304 PROSITE:PS01186 PROSITE:PS00010
HOGENOM:HOG000251821 Gene3D:4.10.740.10 InterPro:IPR017857
SUPFAM:SSF57630 MEROPS:S01.214 OrthoDB:EOG4THVTF EMBL:M21757
EMBL:M33826 PIR:A30351 RefSeq:NP_001003323.1 UniGene:Cfa.3857
ProteinModelPortal:P19540 SMR:P19540 STRING:P19540 GeneID:404015
KEGG:cfa:404015 CTD:2158 InParanoid:P19540 KO:K01321
NextBio:20817502 Uniprot:P19540
Length = 452
Score = 340 (124.7 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 74/194 (38%), Positives = 111/194 (57%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
N R+VGG + ++PW V L FCGG++I++++V+TAAHC+ + + +V
Sbjct: 213 NDFTRVVGGKDAKPGQFPWQVLLNGKVDAFCGGSIINEKWVVTAAHCIEPDVK---ITIV 269
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EHN T+ + R V++ + H YNA K ++HDIALL+LD PL V+P+C+
Sbjct: 270 AGEHNTEKREHTE-QKRNVIRTILHHSYNATINK-YNHDIALLELDEPLTLNSYVTPICI 327
Query: 309 P--QLGEKFTQ-RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTGNM 365
+ F + +G V GWGRV G+ AS L+ +VP++ C + F + NM
Sbjct: 328 ADREYSNIFLKFGSGYVSGWGRVFNKGRSASILQYLKVPLVDRATCLRSTKFT--IYNNM 385
Query: 366 MCAGYVEGGKDSCQ 379
CAG+ EGGKDSCQ
Sbjct: 386 FCAGFHEGGKDSCQ 399
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 274 (101.5 bits), Expect = 5.5e-30, Sum P(2) = 5.5e-30
Identities = 55/131 (41%), Positives = 84/131 (64%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ + V+ ATNRPD LDPAL+RPGR DR+V GL
Sbjct: 268 GGHDEREQTLNQM----LVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVGL 323
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I K+H R + + D++ E++AR P +GA++ ++ EA + A R R+V S
Sbjct: 324 PDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTARRVVS 383
Query: 601 EKDFLEAVNKV 611
K+F A +K+
Sbjct: 384 MKEFDAAKDKI 394
Score = 138 (53.6 bits), Expect = 5.5e-30, Sum P(2) = 5.5e-30
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+++ + +P +F LG P G+LL G PGTGKTL A+A+A F + GS+ V+ +V
Sbjct: 169 LVDYLREPSRFQKLGGRIPSGILLVGQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFV 228
Query: 172 G 172
G
Sbjct: 229 G 229
Score = 54 (24.1 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GS+ V+ +VG GA
Sbjct: 200 KTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGA 232
Score = 54 (24.1 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 45 IRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGARMI 90
I ++G K + A+A F + GS+ V+ +VG GA +
Sbjct: 190 ILLVGQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRV 235
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 255 (94.8 bits), Expect = 5.7e-30, Sum P(2) = 5.7e-30
Identities = 55/150 (36%), Positives = 86/150 (57%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ I ++ ATNRPD LDPAL+RPGR DR +
Sbjct: 272 GGHDEREQTLNQL----LVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDT 327
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I K+H + + D+ ++LAR P TGA++ ++ EA + A R +KV +
Sbjct: 328 PDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVIN 387
Query: 601 EKDFLEAVNKV-ARCTKIINADSENPKYII 629
++ EA+ +V A K SE K ++
Sbjct: 388 MEEMEEAIERVIAGPEKKSKVISEREKRLV 417
Score = 157 (60.3 bits), Expect = 5.7e-30, Sum P(2) = 5.7e-30
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
++E + P K+ LG PKGVLLFG PGTGKTL ARA+A F + GS+ V+ +V
Sbjct: 173 IVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFV 232
Query: 172 G 172
G
Sbjct: 233 G 233
Score = 63 (27.2 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 467 MQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+ +EK VT++D+ G E E+L E+VE
Sbjct: 147 LHTDEKKRVTFADVAGIDEVKEELAEIVE 175
Score = 54 (24.1 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GS+ V+ +VG GA
Sbjct: 204 KTLLARAIAGEAGVPFFSISGSDFVEMFVGVGA 236
Score = 52 (23.4 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
A+A F + GS+ V+ +VG GA +
Sbjct: 210 AIAGEAGVPFFSISGSDFVEMFVGVGASRV 239
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 255 (94.8 bits), Expect = 5.7e-30, Sum P(2) = 5.7e-30
Identities = 55/150 (36%), Positives = 86/150 (57%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ I ++ ATNRPD LDPAL+RPGR DR +
Sbjct: 272 GGHDEREQTLNQL----LVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDT 327
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I K+H + + D+ ++LAR P TGA++ ++ EA + A R +KV +
Sbjct: 328 PDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVIN 387
Query: 601 EKDFLEAVNKV-ARCTKIINADSENPKYII 629
++ EA+ +V A K SE K ++
Sbjct: 388 MEEMEEAIERVIAGPEKKSKVISEREKRLV 417
Score = 157 (60.3 bits), Expect = 5.7e-30, Sum P(2) = 5.7e-30
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
++E + P K+ LG PKGVLLFG PGTGKTL ARA+A F + GS+ V+ +V
Sbjct: 173 IVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFV 232
Query: 172 G 172
G
Sbjct: 233 G 233
Score = 63 (27.2 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 467 MQVEEKPDVTYSDIGGCKEQIEKLREVVE 495
+ +EK VT++D+ G E E+L E+VE
Sbjct: 147 LHTDEKKRVTFADVAGIDEVKEELAEIVE 175
Score = 54 (24.1 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GS+ V+ +VG GA
Sbjct: 204 KTLLARAIAGEAGVPFFSISGSDFVEMFVGVGA 236
Score = 52 (23.4 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
A+A F + GS+ V+ +VG GA +
Sbjct: 210 AIAGEAGVPFFSISGSDFVEMFVGVGASRV 239
>ZFIN|ZDB-GENE-051127-11 [details] [associations]
symbol:zgc:123295 "zgc:123295" species:7955 "Danio
rerio" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008236 "serine-type peptidase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114
Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135
PROSITE:PS50240 SMART:SM00020 ZFIN:ZDB-GENE-051127-11 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304
HOGENOM:HOG000251820 MEROPS:S01.146 EMBL:BC110117 IPI:IPI00679270
RefSeq:NP_001032651.1 UniGene:Dr.18631 ProteinModelPortal:Q2YDQ2
GeneID:641564 KEGG:dre:641564 InParanoid:Q2YDQ2 NextBio:20901608
ArrayExpress:Q2YDQ2 Uniprot:Q2YDQ2
Length = 310
Score = 339 (124.4 bits), Expect = 6.3e-30, P = 6.3e-30
Identities = 78/206 (37%), Positives = 119/206 (57%)
Query: 180 CNNEGCGVPNRMDRIVGGWTTEVNEYPWVVALEQA--GKFFCGGTLISDRYVLTAAHCVR 237
C CG +IVGG +PW V+L+ G FCGG+LI+ +VL+AAHC +
Sbjct: 22 CQLNVCGRAPLNTKIVGGQNAGAGSWPWQVSLQSPTYGGHFCGGSLINKDWVLSAAHCFQ 81
Query: 238 SSKRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPL 297
S ++V + +++ QI T+ VV+V+ HP YN S+D+DIAL+KLD+ +
Sbjct: 82 DSIGT--IMVKLGLQSQSGSNPYQI-TKTVVQVINHPNYNNP---SNDNDIALVKLDSSV 135
Query: 298 EFKPTVSPVCLPQLGEKFTQRT-GTVVGWGRVEESG-QIASDLRATQVPVMSNQEC-RQF 354
F + PVCL G + T V GWG++ + QI L+ ++P++S+ +C R +
Sbjct: 136 TFNDYIEPVCLAAAGNTYAAGTLSWVTGWGKLSSAANQIPDILQEVEIPIVSHSDCKRAY 195
Query: 355 PGFEAKLTGNMMCAGYVE-GGKDSCQ 379
PG ++T NM+CAG ++ GGKDSCQ
Sbjct: 196 PG---EITSNMICAGLLDQGGKDSCQ 218
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 204 (76.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ E LA++ +GA++ +C A AIR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 178 (67.7 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 544 GPELLTMWFGE 554
Score = 88 (36.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 82 (33.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Score = 61 (26.5 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 8.9e-26, Sum P(3) = 8.9e-26
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 725
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 204 (76.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ E LA++ +GA++ +C A AIR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 178 (67.7 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 544 GPELLTMWFGE 554
Score = 88 (36.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 82 (33.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Score = 61 (26.5 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 8.9e-26, Sum P(3) = 8.9e-26
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 725
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 204 (76.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ E LA++ +GA++ +C A AIR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 178 (67.7 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 544 GPELLTMWFGE 554
Score = 88 (36.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 82 (33.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Score = 61 (26.5 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 8.9e-26, Sum P(3) = 8.9e-26
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 725
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 204 (76.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ E LA++ +GA++ +C A AIR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 178 (67.7 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 544 GPELLTMWFGE 554
Score = 88 (36.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 82 (33.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Score = 61 (26.5 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 8.9e-26, Sum P(3) = 8.9e-26
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 725
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 204 (76.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ E LA++ +GA++ +C A AIR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 178 (67.7 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 544 GPELLTMWFGE 554
Score = 88 (36.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 82 (33.9 bits), Expect = 6.5e-30, Sum P(3) = 6.5e-30
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Score = 61 (26.5 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 8.9e-26, Sum P(3) = 8.9e-26
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 725
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 266 (98.7 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 58/137 (42%), Positives = 82/137 (59%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG EQ L ++ L+ +DGF+ N+ VL TNRPD LDPALMRPGR DR++ G
Sbjct: 417 GGQSEQENTLNQL----LVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGP 472
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLAR----LCPNSTG--AEIRSVCTEAGMFAIRA 594
PD++GR+ IF++H R + ++ + + LAR L P TG A+I +VC EA + A R
Sbjct: 473 PDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAALIAARH 532
Query: 595 RRKVASEKDFLEAVNKV 611
EK F +A+ +V
Sbjct: 533 LNPSVGEKHFEQAIERV 549
Score = 149 (57.5 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 163
E + ++E +N P+++ +LG + PKG LL GPPGTGKTL A+A A FI V G
Sbjct: 310 EAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEAGVPFITVNG 369
Query: 164 SELVQKYVG 172
SE ++ +VG
Sbjct: 370 SEFLEMFVG 378
Score = 52 (23.4 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEG--------AVANRTDACFIRVIGSELVQ 80
K + A A FI V GSE ++ +VG G A+A + C + V + +
Sbjct: 349 KTLLAKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIG 408
Query: 81 KYVGEG 86
+ G G
Sbjct: 409 RKRGRG 414
Score = 42 (19.8 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVV 494
I T+ + +++ V ++D+ GC+E ++ E V
Sbjct: 286 IGETIAKI-IKDDIGVRFADVAGCEEAKLEIMEFV 319
Score = 39 (18.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 314 KFTQRT-GTVVGWGRVEESGQIASDL 338
K TQ +V +G E+ GQ++ DL
Sbjct: 649 KVTQSAYAQIVQFGMSEKLGQVSFDL 674
Score = 37 (18.1 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 158 FIRVIGSELVQKYVGERVLMEGCNNEGCGVPNRMDRIVGGWTTEVNEYPW 207
+ R G E+ K+ + L G + V + R++ T + +Y W
Sbjct: 160 YFRDPGKEITWKHFVQYYLARGLVDRLEVVNKQFVRVIPAPGTSLEKYAW 209
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 221 (82.9 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 338 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 397
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 398 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 450
Score = 204 (76.9 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 616 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 675
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ E LA++ +GA++ +C A AIR
Sbjct: 676 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 716
Score = 178 (67.7 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 233 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 292
Query: 169 KYVGE 173
K GE
Sbjct: 293 KLAGE 297
Score = 164 (62.8 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 500 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 559
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 560 GPELLTMWFGE 570
Score = 88 (36.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 212 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 242
Score = 82 (33.9 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 476 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 519
Score = 61 (26.5 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 266 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 297
Score = 56 (24.8 bits), Expect = 9.7e-26, Sum P(3) = 9.7e-26
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 273 AVANETGAFFFLINGPEIMSKLAGE 297
Score = 54 (24.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 540 KTLLAKAIANECQANFISIKGPELLTMWFGE 570
Score = 51 (23.0 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 546 AIANECQANFISIKGPELLTMWFGE 570
Score = 43 (20.2 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 690 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 741
>ZFIN|ZDB-GENE-070424-102 [details] [associations]
symbol:zgc:163025 "zgc:163025" species:7955 "Danio
rerio" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0007596 "blood coagulation" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008236 "serine-type
peptidase activity" evidence=IEA] InterPro:IPR000294
InterPro:IPR000742 InterPro:IPR001254 InterPro:IPR001314
InterPro:IPR001881 InterPro:IPR009003 InterPro:IPR012224
InterPro:IPR018114 Pfam:PF00008 Pfam:PF00089 Pfam:PF00594
PIRSF:PIRSF001143 PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50026 PROSITE:PS50240
PROSITE:PS50998 SMART:SM00020 SMART:SM00069 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 ZFIN:ZDB-GENE-070424-102
GO:GO:0005576 GO:GO:0007596 GO:GO:0006508 GO:GO:0005509
GO:GO:0004252 InterPro:IPR013032 PROSITE:PS00022 SUPFAM:SSF50494
PROSITE:PS00010 GeneTree:ENSGT00560000076714 Gene3D:4.10.740.10
InterPro:IPR017857 SUPFAM:SSF57630 EMBL:FP017167 EMBL:FP067451
IPI:IPI00846088 Ensembl:ENSDART00000109479 Bgee:F1R612
Uniprot:F1R612
Length = 431
Score = 338 (124.0 bits), Expect = 8.1e-30, P = 8.1e-30
Identities = 75/192 (39%), Positives = 112/192 (58%)
Query: 193 RIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVVISEH 252
RIV G + PW LE G++ CGG +++ ++++TAAHC+ K L V++ EH
Sbjct: 194 RIVKGDVCPKGQCPWQALLEYDGQYKCGGVILNSQWIITAAHCIWR-KDPALLQVIVGEH 252
Query: 253 NRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCLPQLG 312
R T+ + R+V +V HP+YN S D D+ALL+L P+ P PVCLP
Sbjct: 253 IRDRDEGTE-QMRKVSEVFLHPQYNHS---STDSDVALLRLHRPVTLGPYALPVCLPPPN 308
Query: 313 EKFTQ-----RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTGNMMC 367
F++ R TV GWGR+ +SG ++ L+ QVP +S+++CR G ++ NM+C
Sbjct: 309 GTFSRTLASIRMSTVSGWGRLAQSGPPSTVLQRLQVPRVSSEDCRARSGLT--VSRNMLC 366
Query: 368 AGYVEGGKDSCQ 379
AG+ EGG+DSCQ
Sbjct: 367 AGFAEGGRDSCQ 378
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 266 (98.7 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 56/137 (40%), Positives = 82/137 (59%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+ GG EQ L ++ L+ +DGF+ N+ +L TNRPD LDPALMRPGR DR++
Sbjct: 264 NFGGQSEQENTLNQL----LVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYI 319
Query: 539 GLPDLEGRTHIFKIHARSMSVE----RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 594
G PD++GR IFK+H R + ++ +D LA L P +GA+I +VC EA + A R
Sbjct: 320 GPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARH 379
Query: 595 RRKVASEKDFLEAVNKV 611
++K F +A+ +V
Sbjct: 380 LSDAINQKHFEQAIERV 396
Score = 149 (57.5 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 163
E + ++E +N P+++ +LG + PKG +L GPPGTGKTL A+A A + FI V G
Sbjct: 159 EAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNG 218
Query: 164 SELVQKYVG 172
SE ++ +VG
Sbjct: 219 SEFLEMFVG 227
Score = 55 (24.4 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 1 MLELINQIHISQTFNNISVK-PLD-IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
++E +N + + + ++ K P I G K + A A + FI V GSE ++
Sbjct: 164 IMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLE 223
Query: 55 KYVGEG--------AVANRTDACFIRVIGSELVQKYVGEG 86
+VG G A+A + C + + + V + G G
Sbjct: 224 MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG 263
Score = 40 (19.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 313 EKFTQRT-GTVVGWGRVEESGQIASDL 338
+K TQ +V +G E+ GQI+ DL
Sbjct: 495 KKVTQSAYAQIVQFGMNEKVGQISFDL 521
Score = 37 (18.1 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 673 IDPTVTMMQVEEKPDVTYSDIG 694
++ ++Q EEK V Y + G
Sbjct: 400 LEKKTQVLQPEEKKTVAYHEAG 421
Score = 37 (18.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIG 481
++ ++Q EEK V Y + G
Sbjct: 400 LEKKTQVLQPEEKKTVAYHEAG 421
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 269 (99.8 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+ GG EQ L ++ L+ +DGF+ N+ +L TNRPD LDPALMRPGR DR++
Sbjct: 421 NFGGQSEQENTLNQL----LVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFI 476
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLAR----LCPNSTGAEIRSVCTEAGMFAIRA 594
G PD++GR IFK+H R + ++ + E LAR L P +GA++ +VC EA + A R
Sbjct: 477 GPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARH 536
Query: 595 RRKVASEKDFLEAVNKV 611
++K F +A+ +V
Sbjct: 537 LSDSINQKHFEQAIERV 553
Score = 150 (57.9 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 163
E + ++E +N P+++ +LG + PKG +L GPPGTGKTL A+A A + FI V G
Sbjct: 316 EAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSG 375
Query: 164 SELVQKYVG 172
SE ++ +VG
Sbjct: 376 SEFLEMFVG 384
Score = 56 (24.8 bits), Expect = 6.4e-20, Sum P(3) = 6.4e-20
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 1 MLELINQIHISQTFNNISVK-PLD-IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
++E +N + + + ++ K P I G K + A A + FI V GSE ++
Sbjct: 321 IMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 380
Query: 55 KYVGEG--------AVANRTDACFIRVIGSELVQKYVGEG 86
+VG G A+A + C + + + V + G G
Sbjct: 381 MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG 420
Score = 39 (18.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 314 KFTQRT-GTVVGWGRVEESGQIASDL 338
K TQ +V +G E+ GQI+ DL
Sbjct: 653 KVTQSAYAQIVQFGMNEKVGQISFDL 678
Score = 37 (18.1 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 673 IDPTVTMMQVEEKPDVTYSDIG 694
++ ++Q EEK V Y + G
Sbjct: 557 LEKKTQVLQPEEKKTVAYHEAG 578
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIG 481
++ ++Q EEK V Y + G
Sbjct: 557 LEKKTQVLQPEEKKTVAYHEAG 578
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 214 (80.4 bits), Expect = 7.4e-28, Sum P(2) = 7.4e-28
Identities = 43/120 (35%), Positives = 70/120 (58%)
Query: 484 KEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDL 543
K Q E R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+++ +PD
Sbjct: 313 KTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDA 372
Query: 544 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
GR I +IH ++M ++ + E +A GA++ ++CTE+ + IR + V +D
Sbjct: 373 TGRLEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLED 432
Score = 200 (75.5 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 52/161 (32%), Positives = 81/161 (50%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + + N+ ++ ATNRPD +DPA++RPGRLD+ + LPDL R I K
Sbjct: 598 VINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKA 657
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEA-VNKV 611
V +D+ E L + +GA++ +C A AIR + EKD +
Sbjct: 658 CLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRE----SIEKDIESTKARQE 713
Query: 612 ARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEE 652
+ TK+ + DS +P I F + + SV+ DI +
Sbjct: 714 SGDTKMED-DSVDPVPEITRDHFQEAMRSARRSVSDNDIRK 753
Score = 184 (69.8 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R ++EL + P+ F N+G++PPKG+LL+GPPG GKT+ ARAVAN T A F + G E++
Sbjct: 215 RELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMS 274
Query: 169 KYVGE 173
K GE
Sbjct: 275 KLAGE 279
Score = 167 (63.8 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E++ T+ + PEKF G++P KGVL +GPPG GKTL A+A+AN A FI + G EL
Sbjct: 486 ELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 545
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 546 LTMWFGE 552
Score = 80 (33.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 470 EEKPD-VTYSDIGGCKEQIEKLREVVETPLLH 500
E++ D V Y DIGG ++Q+ ++RE+VE PL H
Sbjct: 193 EDRLDEVGYDDIGGVRKQLGQIRELVELPLRH 224
Score = 77 (32.2 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 434 LWDLTADKQTLQNEQPLQIHIPLPPKI-DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLRE 492
L D T + L++ Q H + +P+ V E P T+ DIGG + +LRE
Sbjct: 430 LEDETISAEILESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKRELRE 489
Query: 493 VVETPLLHLDGF 504
V+ P+ H + F
Sbjct: 490 TVQYPVEHPEKF 501
Score = 73 (30.8 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 12 QTFNNISVKP---LDIFN----GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
Q F NI VKP + ++ G IAR AVAN T A F + G E++ K GE
Sbjct: 226 QLFKNIGVKPPKGILLYGPPGCGKTMIAR-AVANETGAFFFLINGPEIMSKLAGE 279
Score = 56 (24.8 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 255 AVANETGAFFFLINGPEIMSKLAGE 279
Score = 54 (24.1 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 522 KTLLAKAIANECQANFISIKGPELLTMWFGE 552
Score = 51 (23.0 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 528 AIANECQANFISIKGPELLTMWFGE 552
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 204 (76.9 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ E LA++ +GA++ +C A AIR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 178 (67.7 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 161 (61.7 bits), Expect = 5.5e-26, Sum P(3) = 5.5e-26
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q + + P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI + G EL
Sbjct: 488 ELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 547
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 548 LTMWFGE 554
Score = 88 (36.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 79 (32.9 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+++V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKF 503
Score = 61 (26.5 bits), Expect = 5.5e-26, Sum P(3) = 5.5e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 43 (20.2 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 725
>UNIPROTKB|Q5FBE1 [details] [associations]
symbol:F9 "Coagulation factor IX" species:9606 "Homo
sapiens" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR000294 InterPro:IPR000742 InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR012224
InterPro:IPR018114 Pfam:PF00089 Pfam:PF00594 PIRSF:PIRSF001143
PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 PROSITE:PS50998 SMART:SM00020
SMART:SM00069 SMART:SM00181 GO:GO:0005576 GO:GO:0007596
GO:GO:0006508 GO:GO:0005509 GO:GO:0004252 SUPFAM:SSF50494
HOVERGEN:HBG013304 Gene3D:4.10.740.10 InterPro:IPR017857
SUPFAM:SSF57630 EMBL:AL033403 UniGene:Hs.522798 Allergome:9616
HGNC:HGNC:3551 EMBL:AB186358 IPI:IPI01012693
ProteinModelPortal:Q5FBE1 SMR:Q5FBE1 STRING:Q5FBE1 PRIDE:Q5FBE1
Ensembl:ENST00000394090 UCSC:uc004fat.1 ArrayExpress:Q5FBE1
Bgee:Q5FBE1 Uniprot:Q5FBE1
Length = 423
Score = 336 (123.3 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 71/196 (36%), Positives = 112/196 (57%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
N R+VGG + ++PW V L FCGG+++++++++TAAHCV + + + VV
Sbjct: 184 NDFTRVVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVK---ITVV 240
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EHN T+ + R V++++ H YNA ++HDIALL+LD PL V+P+C+
Sbjct: 241 AGEHNIEETEHTE-QKRNVIRIIPHHNYNA-AINKYNHDIALLELDEPLVLNSYVTPICI 298
Query: 309 PQLGEKFTQ-----RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTG 363
+++T +G V GWGRV G+ A L+ +VP++ C + F +
Sbjct: 299 AD--KEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFT--IYN 354
Query: 364 NMMCAGYVEGGKDSCQ 379
NM CAG+ EGG+DSCQ
Sbjct: 355 NMFCAGFHEGGRDSCQ 370
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 268 (99.4 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+ GG EQ L ++ L+ +DGF+ N+ +L TNRPD LDPAL+RPGR DR++
Sbjct: 419 NFGGQSEQENTLNQL----LVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 474
Query: 539 GLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 594
G PD++GR IFK+H R + ++E+D LA L P +GA++ +VC EA + A R
Sbjct: 475 GPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARH 534
Query: 595 RRKVASEKDFLEAVNKV 611
+EK F +A+ +V
Sbjct: 535 LSDAINEKHFEQAIERV 551
Score = 150 (57.9 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 163
E + ++E +N P+++ +LG + PKG +L GPPGTGKTL A+A A + FI V G
Sbjct: 314 EAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSG 373
Query: 164 SELVQKYVG 172
SE ++ +VG
Sbjct: 374 SEFLEMFVG 382
Score = 56 (24.8 bits), Expect = 8.1e-20, Sum P(3) = 8.1e-20
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 1 MLELINQIHISQTFNNISVK-PLD-IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
++E +N + + + ++ K P I G K + A A + FI V GSE ++
Sbjct: 319 IMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 378
Query: 55 KYVGEG--------AVANRTDACFIRVIGSELVQKYVGEG 86
+VG G A+A + C + + + V + G G
Sbjct: 379 MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG 418
Score = 39 (18.8 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 314 KFTQRT-GTVVGWGRVEESGQIASDL 338
K TQ +V +G E+ GQI+ DL
Sbjct: 651 KVTQSAYAQIVQFGMNEKVGQISFDL 676
Score = 37 (18.1 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 673 IDPTVTMMQVEEKPDVTYSDIG 694
++ ++Q EEK V Y + G
Sbjct: 555 LEKKTQVLQPEEKKTVAYHEAG 576
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIG 481
++ ++Q EEK V Y + G
Sbjct: 555 LEKKTQVLQPEEKKTVAYHEAG 576
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 268 (99.4 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+ GG EQ L ++ L+ +DGF+ N+ +L TNRPD LDPAL+RPGR DR++
Sbjct: 419 NFGGQSEQENTLNQL----LVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 474
Query: 539 GLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 594
G PD++GR IFK+H R + ++E+D LA L P +GA++ +VC EA + A R
Sbjct: 475 GPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARH 534
Query: 595 RRKVASEKDFLEAVNKV 611
+EK F +A+ +V
Sbjct: 535 LSDAINEKHFEQAIERV 551
Score = 150 (57.9 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 163
E + ++E +N P+++ +LG + PKG +L GPPGTGKTL A+A A + FI V G
Sbjct: 314 EAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSG 373
Query: 164 SELVQKYVG 172
SE ++ +VG
Sbjct: 374 SEFLEMFVG 382
Score = 56 (24.8 bits), Expect = 8.1e-20, Sum P(3) = 8.1e-20
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 1 MLELINQIHISQTFNNISVK-PLD-IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
++E +N + + + ++ K P I G K + A A + FI V GSE ++
Sbjct: 319 IMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 378
Query: 55 KYVGEG--------AVANRTDACFIRVIGSELVQKYVGEG 86
+VG G A+A + C + + + V + G G
Sbjct: 379 MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG 418
Score = 39 (18.8 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 314 KFTQRT-GTVVGWGRVEESGQIASDL 338
K TQ +V +G E+ GQI+ DL
Sbjct: 651 KVTQSAYAQIVQFGMNEKVGQISFDL 676
Score = 37 (18.1 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 673 IDPTVTMMQVEEKPDVTYSDIG 694
++ ++Q EEK V Y + G
Sbjct: 555 LEKKTQVLQPEEKKTVAYHEAG 576
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIG 481
++ ++Q EEK V Y + G
Sbjct: 555 LEKKTQVLQPEEKKTVAYHEAG 576
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 268 (99.4 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+ GG EQ L ++ L+ +DGF+ N+ +L TNRPD LDPALMRPGR DR++
Sbjct: 421 NFGGQSEQENTLNQL----LVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFI 476
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLAR----LCPNSTGAEIRSVCTEAGMFAIRA 594
G PD++GR IFK+H R + ++ + E LAR L P +GA++ +VC EA + A R
Sbjct: 477 GPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARH 536
Query: 595 RRKVASEKDFLEAVNKV 611
++K F +A+ +V
Sbjct: 537 LSDSINQKHFEQAIERV 553
Score = 150 (57.9 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 163
E + ++E +N P+++ +LG + PKG +L GPPGTGKTL A+A A + FI V G
Sbjct: 316 EAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSG 375
Query: 164 SELVQKYVG 172
SE ++ +VG
Sbjct: 376 SEFLEMFVG 384
Score = 56 (24.8 bits), Expect = 8.3e-20, Sum P(3) = 8.3e-20
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 1 MLELINQIHISQTFNNISVK-PLD-IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
++E +N + + + ++ K P I G K + A A + FI V GSE ++
Sbjct: 321 IMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 380
Query: 55 KYVGEG--------AVANRTDACFIRVIGSELVQKYVGEG 86
+VG G A+A + C + + + V + G G
Sbjct: 381 MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG 420
Score = 39 (18.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 314 KFTQRT-GTVVGWGRVEESGQIASDL 338
K TQ +V +G E+ GQI+ DL
Sbjct: 653 KVTQSAYAQIVQFGMNEKVGQISFDL 678
Score = 37 (18.1 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 673 IDPTVTMMQVEEKPDVTYSDIG 694
++ ++Q EEK V Y + G
Sbjct: 557 LEKKTQVLQPEEKKTVAYHEAG 578
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIG 481
++ ++Q EEK V Y + G
Sbjct: 557 LEKKTQVLQPEEKKTVAYHEAG 578
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 227 (85.0 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 47/125 (37%), Positives = 76/125 (60%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R N+ V+ ATNRP+++D AL R GR DR+++ G+PD GR I
Sbjct: 328 RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 387
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDFLEA-- 607
+IH ++M + D+ E +A C GA++ S+C+EA + IR + ++ E D ++A
Sbjct: 388 RIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEV 447
Query: 608 VNKVA 612
+N +A
Sbjct: 448 LNSLA 452
Score = 204 (76.9 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 50/162 (30%), Positives = 83/162 (51%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD R I K
Sbjct: 607 VINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKA 666
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA--RRKVASEKDFLEAVNK 610
R + +D+ LA+ +GA++ +C A AIR +++ EK E ++
Sbjct: 667 SLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEK---ERQDR 723
Query: 611 VARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEE 652
AR +++ D+ +P I F + + SV DI +
Sbjct: 724 QARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDIRK 765
Score = 179 (68.1 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P+ F +GI+PP+G+LLFGPPGTGKTL ARAVAN T + F + G E++
Sbjct: 223 KEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMS 282
Query: 169 KYVGE 173
K GE
Sbjct: 283 KMSGE 287
Score = 163 (62.4 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q + + PEK++ G++P +GVL +GPPG GKTL A+A+AN A FI + G EL
Sbjct: 494 ELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 553
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 554 LTMWFGE 560
Score = 85 (35.0 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
DP + E D+ Y D+GG ++Q+ +++E+VE PL H
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRH 232
Score = 84 (34.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFV--VDLADSVAPTDIEEGM 654
K+A + D + N+ C + AD + ++Q + + +DL D ++ +
Sbjct: 395 KLADDVDLEQIANE---CHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSL 451
Query: 655 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V ++ ++ K P+ V E P+ T+SDIGG + +L+E+V+ P+ H
Sbjct: 452 AVTMENFRFA-----QGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEH 505
Score = 77 (32.2 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
K P+ V E P+ T+SDIGG + +L+E+V+ P+ H
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEH 505
Score = 61 (26.5 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 1 MLELINQIHISQTFNNISVKP---LDIFN----GHKNIARGAVANRTDACFIRVIGSELV 53
M+EL + Q F I +KP + +F G IAR AVAN T + F + G E++
Sbjct: 225 MVEL--PLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIAR-AVANETGSFFFLINGPEVM 281
Query: 54 QKYVGE 59
K GE
Sbjct: 282 SKMSGE 287
Score = 56 (24.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTD 67
K + A+AN A FI + G EL+ + GE AN D
Sbjct: 530 KTLLAKAIANECQANFISIKGPELLTMWFGESE-ANVRD 567
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 536 AIANECQANFISIKGPELLTMWFGE 560
Score = 50 (22.7 bits), Expect = 4.8e-25, Sum P(3) = 4.8e-25
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T + F + G E++ K GE
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGE 287
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 227 (85.0 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 47/125 (37%), Positives = 76/125 (60%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R N+ V+ ATNRP+++D AL R GR DR+++ G+PD GR I
Sbjct: 328 RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 387
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS-EKDFLEA-- 607
+IH ++M + D+ E +A C GA++ S+C+EA + IR + ++ E D ++A
Sbjct: 388 RIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEV 447
Query: 608 VNKVA 612
+N +A
Sbjct: 448 LNSLA 452
Score = 204 (76.9 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 50/162 (30%), Positives = 83/162 (51%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD R I K
Sbjct: 607 VINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKA 666
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA--RRKVASEKDFLEAVNK 610
R + +D+ LA+ +GA++ +C A AIR +++ EK E ++
Sbjct: 667 SLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEK---ERQDR 723
Query: 611 VARCTKIINADSENPKYIINVKQFAKFVVDLADSVAPTDIEE 652
AR +++ D+ +P I F + + SV DI +
Sbjct: 724 QARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDIRK 765
Score = 179 (68.1 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P+ F +GI+PP+G+LLFGPPGTGKTL ARAVAN T + F + G E++
Sbjct: 223 KEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMS 282
Query: 169 KYVGE 173
K GE
Sbjct: 283 KMSGE 287
Score = 163 (62.4 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q + + PEK++ G++P +GVL +GPPG GKTL A+A+AN A FI + G EL
Sbjct: 494 ELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 553
Query: 167 VQKYVGE 173
+ + GE
Sbjct: 554 LTMWFGE 560
Score = 85 (35.0 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
DP + E D+ Y D+GG ++Q+ +++E+VE PL H
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRH 232
Score = 84 (34.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 597 KVASEKDFLEAVNKVARCTKIINADSENPKYIINVKQFAKFV--VDLADSVAPTDIEEGM 654
K+A + D + N+ C + AD + ++Q + + +DL D ++ +
Sbjct: 395 KLADDVDLEQIANE---CHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSL 451
Query: 655 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 713
V ++ ++ K P+ V E P+ T+SDIGG + +L+E+V+ P+ H
Sbjct: 452 AVTMENFRFA-----QGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEH 505
Score = 77 (32.2 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 459 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
K P+ V E P+ T+SDIGG + +L+E+V+ P+ H
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEH 505
Score = 61 (26.5 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 1 MLELINQIHISQTFNNISVKP---LDIFN----GHKNIARGAVANRTDACFIRVIGSELV 53
M+EL + Q F I +KP + +F G IAR AVAN T + F + G E++
Sbjct: 225 MVEL--PLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIAR-AVANETGSFFFLINGPEVM 281
Query: 54 QKYVGE 59
K GE
Sbjct: 282 SKMSGE 287
Score = 56 (24.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGAVANRTD 67
K + A+AN A FI + G EL+ + GE AN D
Sbjct: 530 KTLLAKAIANECQANFISIKGPELLTMWFGESE-ANVRD 567
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 536 AIANECQANFISIKGPELLTMWFGE 560
Score = 50 (22.7 bits), Expect = 4.8e-25, Sum P(3) = 4.8e-25
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T + F + G E++ K GE
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGE 287
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 200 (75.5 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKA 659
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V +D+ + LA++ +GA++ +C A AIR
Sbjct: 660 NLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 178 (67.7 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 7.4e-26, Sum P(3) = 7.4e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 544 GPELLTMWFGE 554
Score = 88 (36.0 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 82 (33.9 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Score = 61 (26.5 bits), Expect = 7.4e-26, Sum P(3) = 7.4e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 40 (19.1 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ ++ + Q S VE+D
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEED 725
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 200 (75.5 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 40/113 (35%), Positives = 65/113 (57%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKA 659
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA--RRKVASEKD 603
+ R V +D+ + LA++ +GA++ +C A AIR ++ E+D
Sbjct: 660 NLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERD 712
Score = 178 (67.7 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 7.4e-26, Sum P(3) = 7.4e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 544 GPELLTMWFGE 554
Score = 88 (36.0 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 82 (33.9 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Score = 61 (26.5 bits), Expect = 7.4e-26, Sum P(3) = 7.4e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 38 (18.4 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ ++ Q S VE+D
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEED 725
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 261 (96.9 bits), Expect = 2.2e-29, Sum P(2) = 2.2e-29
Identities = 54/131 (41%), Positives = 81/131 (61%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ I V+ ATNRPD LDPAL+RPGR DR+V GL
Sbjct: 270 GGHDEREQTLNQM----LVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGL 325
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I K+H R + + D+ L+AR P +GA++ ++ EA +FA R ++ S
Sbjct: 326 PDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVS 385
Query: 601 EKDFLEAVNKV 611
+F A +K+
Sbjct: 386 MVEFELAKDKI 396
Score = 146 (56.5 bits), Expect = 2.2e-29, Sum P(2) = 2.2e-29
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 87 ARMIXXXXXXXXXXXXXXXNEVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGK 143
ARM+ +E + + EL++ P +F LG + P GVL+ GPPGTGK
Sbjct: 143 ARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGK 202
Query: 144 TLCARAVANRTDACFIRVIGSELVQKYVG 172
TL A+A+A F + GS+ V+ +VG
Sbjct: 203 TLLAKAIAGEAKVPFFTISGSDFVEMFVG 231
Score = 54 (24.1 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GS+ V+ +VG GA
Sbjct: 202 KTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGA 234
Score = 52 (23.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
A+A F + GS+ V+ +VG GA +
Sbjct: 208 AIAGEAKVPFFTISGSDFVEMFVGVGASRV 237
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 261 (96.9 bits), Expect = 2.2e-29, Sum P(2) = 2.2e-29
Identities = 54/131 (41%), Positives = 81/131 (61%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ I V+ ATNRPD LDPAL+RPGR DR+V GL
Sbjct: 270 GGHDEREQTLNQM----LVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGL 325
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I K+H R + + D+ L+AR P +GA++ ++ EA +FA R ++ S
Sbjct: 326 PDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVS 385
Query: 601 EKDFLEAVNKV 611
+F A +K+
Sbjct: 386 MVEFELAKDKI 396
Score = 146 (56.5 bits), Expect = 2.2e-29, Sum P(2) = 2.2e-29
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 87 ARMIXXXXXXXXXXXXXXXNEVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGK 143
ARM+ +E + + EL++ P +F LG + P GVL+ GPPGTGK
Sbjct: 143 ARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGK 202
Query: 144 TLCARAVANRTDACFIRVIGSELVQKYVG 172
TL A+A+A F + GS+ V+ +VG
Sbjct: 203 TLLAKAIAGEAKVPFFTISGSDFVEMFVG 231
Score = 54 (24.1 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GS+ V+ +VG GA
Sbjct: 202 KTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGA 234
Score = 52 (23.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
A+A F + GS+ V+ +VG GA +
Sbjct: 208 AIAGEAKVPFFTISGSDFVEMFVGVGASRV 237
>UNIPROTKB|P00741 [details] [associations]
symbol:F9 "Coagulation factor IX" species:9913 "Bos taurus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR000294 InterPro:IPR000742 InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR001881 InterPro:IPR009003
InterPro:IPR012224 InterPro:IPR018097 InterPro:IPR018114
Pfam:PF00008 Pfam:PF00089 Pfam:PF00594 PIRSF:PIRSF001143
PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50240
PROSITE:PS50998 SMART:SM00020 SMART:SM00069 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005576 GO:GO:0007596
GO:GO:0006508 GO:GO:0005509 GO:GO:0004252 InterPro:IPR013032
PROSITE:PS00022 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304
PROSITE:PS01186 PROSITE:PS00010 HOGENOM:HOG000251821
Gene3D:4.10.740.10 InterPro:IPR017857 SUPFAM:SSF57630 EMBL:J00007
IPI:IPI00905351 PIR:A14757 UniGene:Bt.13106 PDB:1J34 PDB:1J35
PDBsum:1J34 PDBsum:1J35 ProteinModelPortal:P00741 SMR:P00741
STRING:P00741 MEROPS:S01.214 GlycoSuiteDB:P00741 PRIDE:P00741
InParanoid:P00741 OrthoDB:EOG4THVTF EvolutionaryTrace:P00741
PMAP-CutDB:P00741 Uniprot:P00741
Length = 416
Score = 334 (122.6 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 74/196 (37%), Positives = 111/196 (56%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
+ R+VGG E ++PW V L FCGG+++++++V+TAAHC++ + + VV
Sbjct: 177 DEFSRVVGGEDAERGQFPWQVLLHGEIAAFCGGSIVNEKWVVTAAHCIKPGVK---ITVV 233
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EHN T+ + R V++ + + YNA K + HDIALL+LD PLE V+P+C+
Sbjct: 234 AGEHNTEKPEPTE-QKRNVIRAIPYHSYNASINK-YSHDIALLELDEPLELNSYVTPICI 291
Query: 309 PQ-----LGEKFTQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTG 363
+ KF G V GWG+V G+ AS L+ +VP++ C + F +
Sbjct: 292 ADRDYTNIFSKFGY--GYVSGWGKVFNRGRSASILQYLKVPLVDRATCLRSTKFS--IYS 347
Query: 364 NMMCAGYVEGGKDSCQ 379
+M CAGY EGGKDSCQ
Sbjct: 348 HMFCAGYHEGGKDSCQ 363
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 266 (98.7 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 55/137 (40%), Positives = 83/137 (60%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+ GG EQ L ++ L+ +DGF+ N+ +L TNRPD LDPAL+RPGR DR++
Sbjct: 212 NFGGQSEQENTLNQL----LVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 267
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLAR----LCPNSTGAEIRSVCTEAGMFAIRA 594
G PD++GR IFK+H R + ++ + E LAR L P +GA++ +VC EA + A R
Sbjct: 268 GPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARH 327
Query: 595 RRKVASEKDFLEAVNKV 611
++K F +A+ +V
Sbjct: 328 LSDSINQKHFEQAIERV 344
Score = 143 (55.4 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIE-PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
E + ++E +N P+++ +LG + P KG +L GPPGTGKTL A+A A + FI V
Sbjct: 106 EAKLEIMEFVNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVS 165
Query: 163 GSELVQKYVG 172
GSE ++ +VG
Sbjct: 166 GSEFLEMFVG 175
Score = 55 (24.4 bits), Expect = 2.8e-20, Sum P(3) = 2.8e-20
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEG--------AVANRTDACFIRVIGSELVQ 80
K + A A + FI V GSE ++ +VG G A+A + C + + + V
Sbjct: 146 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 205
Query: 81 KYVGEG 86
+ G G
Sbjct: 206 RKRGRG 211
Score = 39 (18.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 314 KFTQRT-GTVVGWGRVEESGQIASDL 338
K TQ +V +G E+ GQI+ DL
Sbjct: 444 KVTQSAYAQIVQFGMNEKVGQISFDL 469
Score = 37 (18.1 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 673 IDPTVTMMQVEEKPDVTYSDIG 694
++ ++Q EEK V Y + G
Sbjct: 348 LEKKTQVLQPEEKKTVAYHEAG 369
Score = 37 (18.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIG 481
++ ++Q EEK V Y + G
Sbjct: 348 LEKKTQVLQPEEKKTVAYHEAG 369
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 224 (83.9 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 50/133 (37%), Positives = 76/133 (57%)
Query: 482 GCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 541
G +++++ ++E L +DGFD ++K +MATNR DTLDP L+RPG LD K+EF LP
Sbjct: 229 GADREVQRI--LLEL-LNQMDGFDQNISVKAIMATNRKDTLDPTLLRPGHLDHKIEFPLP 285
Query: 542 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVAS 600
D R IF M++ ++ E CP+ +GA+I S+C E+GM + +
Sbjct: 286 DHRKRL-IFSTITSKMNLSEEVNVEDYVA-CPDKISGADINSICQESGMLTVCENCHIFL 343
Query: 601 EKDFLEAVNKVAR 613
KDF +A V +
Sbjct: 344 AKDFKKAYKTVIK 356
Score = 171 (65.3 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
EV M + E + +GI+PP+GVL++GPPG GKT+ A+ VA+ A FI V+GSE
Sbjct: 125 EVWEAMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEF 184
Query: 167 VQKYVGE 173
V KY+GE
Sbjct: 185 VHKYLGE 191
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 200 (75.5 bits), Expect = 2.9e-29, Sum P(3) = 2.9e-29
Identities = 37/101 (36%), Positives = 60/101 (59%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKA 659
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R + +D+ + LA++ +GA++ +C A AIR
Sbjct: 660 NLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 178 (67.7 bits), Expect = 2.9e-29, Sum P(3) = 2.9e-29
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 165 (63.1 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 106 NEVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 161
++V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 483 DDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Query: 162 IGSELVQKYVGE 173
G EL+ + GE
Sbjct: 543 KGPELLTMWFGE 554
Score = 80 (33.2 bits), Expect = 2.9e-29, Sum P(3) = 2.9e-29
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P++T+ DIGG + +L+E+V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKF 503
Score = 78 (32.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGG ++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGVRKQLAQIKEMVELPLRH 226
Score = 61 (26.5 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 1.9e-25, Sum P(3) = 1.9e-25
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 40 (19.1 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ ++ + Q S VE+D
Sbjct: 674 FLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEED 725
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 249 (92.7 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 52/131 (39%), Positives = 79/131 (60%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGFD ++ V+ ATNRPD LDPAL+RPGR DR+V
Sbjct: 273 GGHDEREQTLNQI----LVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDK 328
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I KIHA+ + + E LA+ +GA++ ++ EA + A R RKV
Sbjct: 329 PDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVE 388
Query: 601 EKDFLEAVNKV 611
+D E++++V
Sbjct: 389 TEDLEESIDRV 399
Score = 156 (60.0 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
++E + EKF LG PKG+LL GPPGTGKTL A+A+A F + GSE V+ +V
Sbjct: 174 VVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFV 233
Query: 172 G 172
G
Sbjct: 234 G 234
Score = 57 (25.1 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GSE V+ +VG GA
Sbjct: 205 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA 237
Score = 57 (25.1 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 45 IRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGARMI 90
I +IG K + A+A F + GSE V+ +VG GA +
Sbjct: 195 ILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRV 240
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 266 (98.7 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
Identities = 56/137 (40%), Positives = 82/137 (59%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+ GG EQ L ++ L+ +DGF+ N+ +L TNRPD LDPALMRPGR DR++
Sbjct: 420 NFGGQSEQENTLNQL----LVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYI 475
Query: 539 GLPDLEGRTHIFKIHARSMSVE----RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 594
G PD++GR IFK+H R + ++ +D LA L P +GA+I +VC EA + A R
Sbjct: 476 GPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARH 535
Query: 595 RRKVASEKDFLEAVNKV 611
++K F +A+ +V
Sbjct: 536 LSDAINQKHFEQAIERV 552
Score = 149 (57.5 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 163
E + ++E +N P+++ +LG + PKG +L GPPGTGKTL A+A A + FI V G
Sbjct: 315 EAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNG 374
Query: 164 SELVQKYVG 172
SE ++ +VG
Sbjct: 375 SEFLEMFVG 383
Score = 55 (24.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 1 MLELINQIHISQTFNNISVK-PLD-IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
++E +N + + + ++ K P I G K + A A + FI V GSE ++
Sbjct: 320 IMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLE 379
Query: 55 KYVGEG--------AVANRTDACFIRVIGSELVQKYVGEG 86
+VG G A+A + C + + + V + G G
Sbjct: 380 MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG 419
Score = 40 (19.1 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 313 EKFTQRT-GTVVGWGRVEESGQIASDL 338
+K TQ +V +G E+ GQI+ DL
Sbjct: 651 KKVTQSAYAQIVQFGMNEKVGQISFDL 677
Score = 37 (18.1 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 673 IDPTVTMMQVEEKPDVTYSDIG 694
++ ++Q EEK V Y + G
Sbjct: 556 LEKKTQVLQPEEKKTVAYHEAG 577
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIG 481
++ ++Q EEK V Y + G
Sbjct: 556 LEKKTQVLQPEEKKTVAYHEAG 577
>UNIPROTKB|F1MBC5 [details] [associations]
symbol:F9 "Coagulation factor IXa heavy chain" species:9913
"Bos taurus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 GeneTree:ENSGT00560000076714
EMBL:DAAA02067809 EMBL:DAAA02067810 IPI:IPI00867133
Ensembl:ENSBTAT00000053637 Uniprot:F1MBC5
Length = 324
Score = 331 (121.6 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 73/194 (37%), Positives = 110/194 (56%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
+ R+VGG E ++PW V L FCGG+++++++V+TAAHC++ + + VV
Sbjct: 85 DEFSRVVGGEDAERGQFPWQVLLHGEIAAFCGGSIVNEKWVVTAAHCIKPGVK---ITVV 141
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EHN T+ + R V++ + + YNA K + HDIALL+LD PLE V+P+C+
Sbjct: 142 AGEHNTEKPEPTE-QKRNVIRAIPYHSYNASINK-YSHDIALLELDEPLELNSYVTPICI 199
Query: 309 PQLGEK--FTQ-RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTGNM 365
F + G V GWG+V G+ AS L+ +VP++ C + F + +M
Sbjct: 200 ADRDYTNIFLKFGYGYVSGWGKVFNRGRSASILQYLKVPLVDRATCLRSTKFS--IYSHM 257
Query: 366 MCAGYVEGGKDSCQ 379
CAGY EGGKDSCQ
Sbjct: 258 FCAGYHEGGKDSCQ 271
>UNIPROTKB|F1Q4A4 [details] [associations]
symbol:F7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] InterPro:IPR000294 InterPro:IPR000742
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR001881
InterPro:IPR009003 InterPro:IPR012224 InterPro:IPR018097
InterPro:IPR018114 Pfam:PF00008 Pfam:PF00089 Pfam:PF00594
PIRSF:PIRSF001143 PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50240 PROSITE:PS50998 SMART:SM00020 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0007596 GO:GO:0006508 GO:GO:0005509 GO:GO:0004252
InterPro:IPR013032 PROSITE:PS00022 SUPFAM:SSF50494 PROSITE:PS00010
GeneTree:ENSGT00560000076714 Gene3D:4.10.740.10 InterPro:IPR017857
SUPFAM:SSF57630 OMA:GCEQYCS EMBL:AAEX03013408
Ensembl:ENSCAFT00000010113 Uniprot:F1Q4A4
Length = 446
Score = 331 (121.6 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 82/201 (40%), Positives = 113/201 (56%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
N RIVGG E PW A++ GK CGGTLI +V++AAHC K K+L VV
Sbjct: 188 NPQGRIVGGKVCPKGECPWQAAVKVDGKLLCGGTLIDAAWVVSAAHCFERIKNWKNLTVV 247
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
+ EH+ + + E R V +V+ KY K++ HDIALL L TP+ + V P+CL
Sbjct: 248 LGEHDLSEDDGDEQE-RHVAQVIVPDKYIP--LKTN-HDIALLHLRTPVAYTDHVVPLCL 303
Query: 309 PQLGEKFTQRT------GTVVGWGRVEESGQIASDLRATQVPVMSNQEC----RQFPGFE 358
P+ + F++RT TV GWG++ + G A L A VP + Q+C R+ G
Sbjct: 304 PE--KTFSERTLAFIRFSTVSGWGQLLDRGATALQLMAIDVPRVMTQDCQEQSRRRSGSP 361
Query: 359 AKLTGNMMCAGYVEGGKDSCQ 379
A +T NM CAGY++G KD+CQ
Sbjct: 362 A-ITENMFCAGYLDGSKDACQ 381
>ZFIN|ZDB-GENE-050320-109 [details] [associations]
symbol:zgc:101788 "zgc:101788" species:7955 "Danio
rerio" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005044 "scavenger receptor
activity" evidence=IEA] [GO:0030247 "polysaccharide binding"
evidence=IEA] [GO:0006955 "immune response" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001212
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 Pfam:PF01033 PRINTS:PR00722
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 PROSITE:PS50958
SMART:SM00020 SMART:SM00201 ZFIN:ZDB-GENE-050320-109 GO:GO:0006955
GO:GO:0030247 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494
eggNOG:COG5640 HOVERGEN:HBG013304 GO:GO:0005044 MEROPS:S01.146
EMBL:BC090827 IPI:IPI00495491 UniGene:Dr.109950
ProteinModelPortal:Q5BL24 InParanoid:Q5BL24 Uniprot:Q5BL24
Length = 328
Score = 331 (121.6 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 73/200 (36%), Positives = 108/200 (54%)
Query: 185 CGVPNRMDRIVGGWTTEVNEYPWVVALEQA--GKFFCGGTLISDRYVLTAAHCVRSSKRQ 242
CG RIVGG +PW V+L+ G FCGG+LIS +VLTAAHC+ +
Sbjct: 25 CGQAPLNSRIVGGVNAPEGSWPWQVSLQSPKYGGHFCGGSLISSEWVLTAAHCLPGVS-E 83
Query: 243 KDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPT 302
LIV + + V T +R V K++ H YN+ ++D+DIALL+L + + F
Sbjct: 84 SSLIVYLGRRTQQGV-NTHETSRNVAKIIVHSSYNSN---TNDNDIALLRLSSAVTFNDY 139
Query: 303 VSPVCLPQLGEKFTQRTGT-VVGWGRVEESGQIASD--LRATQVPVMSNQECRQFPGFEA 359
+ PVCL ++ T + + GWG V+ + + L+ T +PV++N C G
Sbjct: 140 IRPVCLAAQNSVYSAGTSSWITGWGDVQAGVNLPAPGILQETMIPVVANDRCNALLG-SG 198
Query: 360 KLTGNMMCAGYVEGGKDSCQ 379
+T NM+CAG +GGKD+CQ
Sbjct: 199 TVTNNMICAGLAKGGKDTCQ 218
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 246 (91.7 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 51/131 (38%), Positives = 78/131 (59%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ + +L ATNR D LDPAL+RPGR DR V G
Sbjct: 270 GGNDEREQTLNQL----LVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGN 325
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD++GR I +HAR + D+ ++AR P +GA++ ++ EA + A R R+ +
Sbjct: 326 PDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVT 385
Query: 601 EKDFLEAVNKV 611
+DF A +KV
Sbjct: 386 MEDFENAKDKV 396
Score = 158 (60.7 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
++E + P+KF LG + PKG LL GPPGTGKTL ARA+A F + GS+ V+ +V
Sbjct: 171 IVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFV 230
Query: 172 G 172
G
Sbjct: 231 G 231
Score = 54 (24.1 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GS+ V+ +VG GA
Sbjct: 202 KTLLARAIAGEAGVPFFTISGSDFVEMFVGVGA 234
Score = 52 (23.4 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
A+A F + GS+ V+ +VG GA +
Sbjct: 208 AIAGEAGVPFFTISGSDFVEMFVGVGASRV 237
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 246 (91.7 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 51/131 (38%), Positives = 78/131 (59%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ + +L ATNR D LDPAL+RPGR DR V G
Sbjct: 270 GGNDEREQTLNQL----LVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGN 325
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD++GR I +HAR + D+ ++AR P +GA++ ++ EA + A R R+ +
Sbjct: 326 PDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVT 385
Query: 601 EKDFLEAVNKV 611
+DF A +KV
Sbjct: 386 MEDFENAKDKV 396
Score = 158 (60.7 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
++E + P+KF LG + PKG LL GPPGTGKTL ARA+A F + GS+ V+ +V
Sbjct: 171 IVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFV 230
Query: 172 G 172
G
Sbjct: 231 G 231
Score = 54 (24.1 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GS+ V+ +VG GA
Sbjct: 202 KTLLARAIAGEAGVPFFTISGSDFVEMFVGVGA 234
Score = 52 (23.4 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
A+A F + GS+ V+ +VG GA +
Sbjct: 208 AIAGEAGVPFFTISGSDFVEMFVGVGASRV 237
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 263 (97.6 bits), Expect = 5.7e-29, Sum P(3) = 5.7e-29
Identities = 54/137 (39%), Positives = 83/137 (60%)
Query: 479 DIGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+ GG EQ L ++ L+ +DGF+ N+ +L TNRPD LDPAL+RPGR DR++
Sbjct: 420 NFGGQSEQENTLNQL----LVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 475
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLAR----LCPNSTGAEIRSVCTEAGMFAIRA 594
G PD++GR IFK+H R + ++ + + LAR L P +GA++ +VC EA + A R
Sbjct: 476 GPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARH 535
Query: 595 RRKVASEKDFLEAVNKV 611
++K F +A+ +V
Sbjct: 536 LSDSINQKHFEQAIERV 552
Score = 150 (57.9 bits), Expect = 5.7e-29, Sum P(3) = 5.7e-29
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 107 EVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 163
E + ++E +N P+++ +LG + PKG +L GPPGTGKTL A+A A + FI V G
Sbjct: 315 EAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSG 374
Query: 164 SELVQKYVG 172
SE ++ +VG
Sbjct: 375 SEFLEMFVG 383
Score = 56 (24.8 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 1 MLELINQIHISQTFNNISVK-PLD-IFNGH----KNIARGAVANRTDACFIRVIGSELVQ 54
++E +N + + + ++ K P I G K + A A + FI V GSE ++
Sbjct: 320 IMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 379
Query: 55 KYVGEG--------AVANRTDACFIRVIGSELVQKYVGEG 86
+VG G A+A + C + + + V + G G
Sbjct: 380 MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG 419
Score = 39 (18.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 314 KFTQRT-GTVVGWGRVEESGQIASDL 338
K TQ +V +G E+ GQI+ DL
Sbjct: 652 KVTQSAYAQIVQFGMNEKVGQISFDL 677
Score = 37 (18.1 bits), Expect = 5.7e-29, Sum P(3) = 5.7e-29
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 673 IDPTVTMMQVEEKPDVTYSDIG 694
++ ++Q EEK V Y + G
Sbjct: 556 LEKKTQVLQPEEKKTVAYHEAG 577
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 460 IDPTVTMMQVEEKPDVTYSDIG 481
++ ++Q EEK V Y + G
Sbjct: 556 LEKKTQVLQPEEKKTVAYHEAG 577
>UNIPROTKB|E2RSM7 [details] [associations]
symbol:CTRB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 GeneTree:ENSGT00640000091333
OMA:ADCKKFW EMBL:AAEX03004066 Ensembl:ENSCAFT00000031965
Uniprot:E2RSM7
Length = 265
Score = 330 (121.2 bits), Expect = 5.9e-29, P = 5.9e-29
Identities = 94/260 (36%), Positives = 139/260 (53%)
Query: 179 GCNNEGCGVP------NRMDRIVGGWTTEVNEYPWVVALEQAGKF-FCGGTLISDRYVLT 231
G + CGVP N + RIV G +PW V+L+ + F FCGG+LIS+ +V+T
Sbjct: 15 GAASSHCGVPAIEPVLNGLSRIVNGEDAVPGSWPWQVSLQDSTGFHFCGGSLISEDWVVT 74
Query: 232 AAHC-VRSSKRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIAL 290
AAHC VR+S +VV E ++++ E I+ ++ +V +PK+N ++ DI L
Sbjct: 75 AAHCGVRTSH-----LVVAGEFDQSSS-EENIQVLKIAEVFKNPKFNMFTVRN---DITL 125
Query: 291 LKLDTPLEFKPTVSPVCLPQLGEKFTQRTGTVV-GWGRVEESGQIASD-LRATQVPVMSN 348
LKL TP F TVSPVCLPQ ++F V GWGR + + D L+ +P++SN
Sbjct: 126 LKLATPARFSETVSPVCLPQATDEFPPGLMCVTTGWGRTKYNANKTPDKLQQAALPLLSN 185
Query: 349 QECRQFPGFEAKLTGNMMCAGYV--------EGGKDSCQVTLDEA-DIALLKSYGQGQYT 399
EC++F G +K+T M+CAG GG CQ D A + + S+G G +
Sbjct: 186 AECKKFWG--SKITDVMICAGASGVSSCMGDSGGPLVCQK--DGAWTLVGIVSWGSGTCS 241
Query: 400 KSIKAVEDDIQAVIKRVNEL 419
S+ AV + +I V E+
Sbjct: 242 TSVPAVYSRVTELIPWVQEI 261
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 241 (89.9 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 50/131 (38%), Positives = 78/131 (59%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ + ++ ATNRPD LDPAL+RPGR DR+V
Sbjct: 267 GGHDEREQTLNQL----LVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQ 322
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD++GR I K+H + + D+ ++AR P +GA++ +V EA + A R +
Sbjct: 323 PDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVE 382
Query: 601 EKDFLEAVNKV 611
KDF +A +KV
Sbjct: 383 MKDFDDAKDKV 393
Score = 162 (62.1 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
+++ + P+KF LG PKGVLL GPPGTGKTL ARAVA F + GS+ V+ +V
Sbjct: 168 IIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFV 227
Query: 172 G---ERV---LMEGCNNEGC 185
G RV ++G N C
Sbjct: 228 GVGASRVRDLFVQGKKNAPC 247
Score = 55 (24.4 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + AVA F + GS+ V+ +VG GA
Sbjct: 199 KTLLARAVAGEAGVPFFSISGSDFVEMFVGVGA 231
Score = 53 (23.7 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
AVA F + GS+ V+ +VG GA +
Sbjct: 205 AVAGEAGVPFFSISGSDFVEMFVGVGASRV 234
>UNIPROTKB|P00740 [details] [associations]
symbol:F9 "Coagulation factor IX" species:9606 "Homo
sapiens" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=NAS;TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006508 "proteolysis" evidence=TAS] [GO:0007596 "blood
coagulation" evidence=TAS] [GO:0007597 "blood coagulation,
intrinsic pathway" evidence=TAS] [GO:0007598 "blood coagulation,
extrinsic pathway" evidence=TAS] [GO:0017187 "peptidyl-glutamic
acid carboxylation" evidence=TAS] [GO:0043687 "post-translational
protein modification" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_604
Reactome:REACT_17015 InterPro:IPR000294 InterPro:IPR000742
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR001881
InterPro:IPR009003 InterPro:IPR012224 InterPro:IPR018097
InterPro:IPR018114 Pfam:PF00008 Pfam:PF00089 Pfam:PF00594
PIRSF:PIRSF001143 PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50240 PROSITE:PS50998 SMART:SM00020 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005886
GO:GO:0005576 GO:GO:0007597 GO:GO:0006508 GO:GO:0005509
GO:GO:0004252 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005788
SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 PROSITE:PS01186
DrugBank:DB00170 GO:GO:0043687 PROSITE:PS00010 GO:GO:0005796
PDB:3KCG PDBsum:3KCG DrugBank:DB01109 EMBL:CH471150
DrugBank:DB00025 HOGENOM:HOG000251821 Gene3D:4.10.740.10
InterPro:IPR017857 SUPFAM:SSF57630 DrugBank:DB00100 GO:GO:0007598
GO:GO:0017187 MEROPS:S01.214 OrthoDB:EOG4THVTF CTD:2158 KO:K01321
EMBL:J00136 EMBL:J00137 EMBL:K02053 EMBL:K02048 EMBL:K02049
EMBL:K02051 EMBL:K02052 EMBL:K02402 EMBL:M11309 EMBL:AL033403
EMBL:AF536327 EMBL:FR846239 EMBL:AK292749 EMBL:BC109214
EMBL:BC109215 EMBL:S68634 EMBL:M35672 EMBL:M19063 EMBL:S66752
IPI:IPI00296176 PIR:A00922 RefSeq:NP_000124.1 UniGene:Hs.522798
PDB:1CFH PDB:1CFI PDB:1EDM PDB:1IXA PDB:1MGX PDB:1NL0 PDB:1RFN
PDB:2WPH PDB:2WPI PDB:2WPJ PDB:2WPK PDB:2WPL PDB:2WPM PDB:3LC3
PDB:3LC5 PDBsum:1CFH PDBsum:1CFI PDBsum:1EDM PDBsum:1IXA
PDBsum:1MGX PDBsum:1NL0 PDBsum:1RFN PDBsum:2WPH PDBsum:2WPI
PDBsum:2WPJ PDBsum:2WPK PDBsum:2WPL PDBsum:2WPM PDBsum:3LC3
PDBsum:3LC5 ProteinModelPortal:P00740 SMR:P00740 DIP:DIP-58520N
STRING:P00740 Allergome:9616 GlycoSuiteDB:P00740 PhosphoSite:P00740
DMDM:67476446 PaxDb:P00740 PeptideAtlas:P00740 PRIDE:P00740
DNASU:2158 Ensembl:ENST00000218099 GeneID:2158 KEGG:hsa:2158
UCSC:uc004fas.1 GeneCards:GC0XP138612 HGNC:HGNC:3551 HPA:HPA000254
MIM:300746 MIM:300807 MIM:306900 neXtProt:NX_P00740 Orphanet:169799
Orphanet:169796 Orphanet:169793 Orphanet:177929 PharmGKB:PA27954
InParanoid:P00740 OMA:SAECTVF PhylomeDB:P00740 SABIO-RK:P00740
BindingDB:P00740 ChEMBL:CHEMBL2016 EvolutionaryTrace:P00740
GenomeRNAi:2158 NextBio:8719 PMAP-CutDB:P00740 ArrayExpress:P00740
Bgee:P00740 CleanEx:HS_F9 Genevestigator:P00740
GermOnline:ENSG00000101981 Uniprot:P00740
Length = 461
Score = 336 (123.3 bits), Expect = 6.6e-29, P = 6.6e-29
Identities = 71/196 (36%), Positives = 112/196 (57%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
N R+VGG + ++PW V L FCGG+++++++++TAAHCV + + + VV
Sbjct: 222 NDFTRVVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVK---ITVV 278
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EHN T+ + R V++++ H YNA ++HDIALL+LD PL V+P+C+
Sbjct: 279 AGEHNIEETEHTE-QKRNVIRIIPHHNYNA-AINKYNHDIALLELDEPLVLNSYVTPICI 336
Query: 309 PQLGEKFTQ-----RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTG 363
+++T +G V GWGRV G+ A L+ +VP++ C + F +
Sbjct: 337 AD--KEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFT--IYN 392
Query: 364 NMMCAGYVEGGKDSCQ 379
NM CAG+ EGG+DSCQ
Sbjct: 393 NMFCAGFHEGGRDSCQ 408
>UNIPROTKB|P25155 [details] [associations]
symbol:F10 "Coagulation factor X" species:9031 "Gallus
gallus" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR000294 InterPro:IPR000742
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR001881
InterPro:IPR009003 InterPro:IPR012224 InterPro:IPR018097
InterPro:IPR018114 Pfam:PF00008 Pfam:PF00089 Pfam:PF00594
PIRSF:PIRSF001143 PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50240 PROSITE:PS50998 SMART:SM00020 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0007596 GO:GO:0006508 GO:GO:0005509 GO:GO:0004252
InterPro:IPR013032 PROSITE:PS00022 SUPFAM:SSF50494
HOVERGEN:HBG013304 PROSITE:PS01186 PROSITE:PS00010 MEROPS:S01.216
CTD:2159 KO:K01314 Gene3D:4.10.740.10 InterPro:IPR017857
SUPFAM:SSF57630 EMBL:D00844 IPI:IPI00587100 PIR:S15838
RefSeq:NP_990353.1 UniGene:Gga.514 ProteinModelPortal:P25155
SMR:P25155 GeneID:395876 KEGG:gga:395876 NextBio:20815943
Uniprot:P25155
Length = 475
Score = 340 (124.7 bits), Expect = 6.9e-29, P = 6.9e-29
Identities = 77/197 (39%), Positives = 112/197 (56%)
Query: 188 PNRMDRIVGGWTTEVNEYPW-VVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLI 246
PN RIVGG E PW V + + G+ FCGGT++++ ++LTAAHC+ SK K
Sbjct: 235 PNVDTRIVGGDECRPGECPWQAVLINEKGEEFCGGTILNEDFILTAAHCINQSKEIK--- 291
Query: 247 VVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPV 306
VV+ E +R ++ T K+ H KY A+ ++D+DIAL+KL P++F V P
Sbjct: 292 VVVGEVDREKEEHSET-THTAEKIFVHSKYIAE---TYDNDIALIKLKEPIQFSEYVVPA 347
Query: 307 CLPQL---GEKF-TQRTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLT 362
CLPQ E Q++G V G+GR E+G+++ L+ +VP + C+Q F +T
Sbjct: 348 CLPQADFANEVLMNQKSGMVSGFGREFEAGRLSKRLKVLEVPYVDRSTCKQSTNFA--IT 405
Query: 363 GNMMCAGYVEGGKDSCQ 379
NM CAGY KD+CQ
Sbjct: 406 ENMFCAGYETEQKDACQ 422
>RGD|2589 [details] [associations]
symbol:F9 "coagulation factor IX" species:10116 "Rattus norvegicus"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007596 "blood coagulation" evidence=IEA;ISO;IDA]
[GO:0008152 "metabolic process" evidence=ISO] [GO:0008233 "peptidase
activity" evidence=ISO] InterPro:IPR001254 InterPro:IPR001314
InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020
RGD:2589 GO:GO:0005576 GO:GO:0007596 GO:GO:0006508 GO:GO:0004252
SUPFAM:SSF50494 HOVERGEN:HBG013304 MEROPS:S01.214 CTD:2158 KO:K01321
EMBL:M26247 IPI:IPI00765267 PIR:I84621 RefSeq:NP_113728.1
UniGene:Rn.37599 ProteinModelPortal:P16296 SMR:P16296 PRIDE:P16296
GeneID:24946 KEGG:rno:24946 NextBio:604947 Genevestigator:P16296
Uniprot:P16296
Length = 282
Score = 329 (120.9 bits), Expect = 7.6e-29, P = 7.6e-29
Identities = 73/196 (37%), Positives = 113/196 (57%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
N R+VGG + + PW V L + FCGG +I++++++TAAHC++ + + VV
Sbjct: 51 NDFTRVVGGENAKPGQIPWQVILNGEIEAFCGGAIINEKWIVTAAHCLKPGDK---IEVV 107
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EHN +T+ + R V++ + H +YNA K + HDIALL+LD PL V+P+C+
Sbjct: 108 AGEHNIDEKEDTE-QRRNVIRTIPHHQYNATINK-YSHDIALLELDKPLILNSYVTPICV 165
Query: 309 PQLGEKFTQ-----RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTG 363
+++T +G V GWG+V G+ AS L+ +VP++ C + F +
Sbjct: 166 AN--KEYTNIFLKFGSGYVSGWGKVFNKGRQASILQYLRVPLVDRATCLRSTKFS--IYN 221
Query: 364 NMMCAGYVEGGKDSCQ 379
NM CAGY EGGKDSC+
Sbjct: 222 NMFCAGYREGGKDSCE 237
>UNIPROTKB|P16296 [details] [associations]
symbol:F9 "Coagulation factor IX" species:10116 "Rattus
norvegicus" [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 RGD:2589
GO:GO:0005576 GO:GO:0007596 GO:GO:0006508 GO:GO:0004252
SUPFAM:SSF50494 HOVERGEN:HBG013304 MEROPS:S01.214 CTD:2158
KO:K01321 EMBL:M26247 IPI:IPI00765267 PIR:I84621 RefSeq:NP_113728.1
UniGene:Rn.37599 ProteinModelPortal:P16296 SMR:P16296 PRIDE:P16296
GeneID:24946 KEGG:rno:24946 NextBio:604947 Genevestigator:P16296
Uniprot:P16296
Length = 282
Score = 329 (120.9 bits), Expect = 7.6e-29, P = 7.6e-29
Identities = 73/196 (37%), Positives = 113/196 (57%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
N R+VGG + + PW V L + FCGG +I++++++TAAHC++ + + VV
Sbjct: 51 NDFTRVVGGENAKPGQIPWQVILNGEIEAFCGGAIINEKWIVTAAHCLKPGDK---IEVV 107
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EHN +T+ + R V++ + H +YNA K + HDIALL+LD PL V+P+C+
Sbjct: 108 AGEHNIDEKEDTE-QRRNVIRTIPHHQYNATINK-YSHDIALLELDKPLILNSYVTPICV 165
Query: 309 PQLGEKFTQ-----RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTG 363
+++T +G V GWG+V G+ AS L+ +VP++ C + F +
Sbjct: 166 AN--KEYTNIFLKFGSGYVSGWGKVFNKGRQASILQYLRVPLVDRATCLRSTKFS--IYN 221
Query: 364 NMMCAGYVEGGKDSCQ 379
NM CAGY EGGKDSC+
Sbjct: 222 NMFCAGYREGGKDSCE 237
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 253 (94.1 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 54/151 (35%), Positives = 87/151 (57%)
Query: 480 IGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFG 539
+GG ++ E + + L +DGF + VL ATNRPD LD AL+RPGR DR+V
Sbjct: 362 MGGGNDERE---QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 418
Query: 540 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA 599
PD+ GR I K+H+R ++ +D+ +E +AR P TGA+++++ EA + A R K
Sbjct: 419 RPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEI 478
Query: 600 SEKDFLEAVNKVARCTKIINAD-SENPKYII 629
S+ + +A+ ++ + NA SE K ++
Sbjct: 479 SKDEISDALERIIAGPEKKNAVVSEEKKRLV 509
Score = 150 (57.9 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q +++ + P+K+ LG + PKG LL GPPGTGKTL ARAVA F SE
Sbjct: 261 ELQE-VVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEF 319
Query: 167 VQKYVG 172
V+ +VG
Sbjct: 320 VELFVG 325
Score = 48 (22.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + AVA F SE V+ +VG GA
Sbjct: 296 KTLLARAVAGEAGVPFFSCAASEFVELFVGVGA 328
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 374 GKDSCQVTLDEADIA----LLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTG 421
G+ QVT+D D+A +LK + +G K+I + D + V +R TG
Sbjct: 409 GRFDRQVTVDRPDVAGRVQILKVHSRG---KAI-GKDVDYEKVARRTPGFTG 456
Score = 45 (20.9 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 470 EEKPD--VTYSDIGGCKEQIEKLREVVE 495
+E P+ VT+ D+ G + +L+EVV+
Sbjct: 240 QEVPETGVTFGDVAGADQAKLELQEVVD 267
>UNIPROTKB|F1PD94 [details] [associations]
symbol:PRSS8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 GeneTree:ENSGT00700000104471
OMA:HFVQEDM EMBL:AAEX03004380 Ensembl:ENSCAFT00000026685
Uniprot:F1PD94
Length = 331
Score = 328 (120.5 bits), Expect = 9.8e-29, P = 9.8e-29
Identities = 72/204 (35%), Positives = 111/204 (54%)
Query: 185 CGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKD 244
CGV ++ RI GG ++PW V++ G CGG+L+S+++VL+AAHC ++D
Sbjct: 31 CGVASQA-RITGGSGAAAGQWPWQVSITYDGVHVCGGSLVSEQWVLSAAHCFPREHLKED 89
Query: 245 LIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVS 304
V + H + Y + E R V +V++H Y +G++ DIALL+L +P+ F +
Sbjct: 90 YEVKLGAHQLDS-YTPEAEVRTVAQVISHTSYQQEGSQG---DIALLQLSSPVTFSRYIR 145
Query: 305 PVCLPQLGEKFTQRTG-TVVGWGRVEESGQIAS--DLRATQVPVMSNQECRQFPGFEAK- 360
P+CLP F TV GWG V S + + L+ +VP++S + C AK
Sbjct: 146 PICLPAANASFPNGLQCTVTGWGHVAPSVSLLAPRQLQQLEVPLISRETCNCLYNINAKP 205
Query: 361 -----LTGNMMCAGYVEGGKDSCQ 379
+ +M+CAGYV GGKD+CQ
Sbjct: 206 EEPHFIQQDMVCAGYVRGGKDACQ 229
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 221 (82.9 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R +V L +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD GR I
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKD 603
+IH ++M + D+ E +A GA++ ++C+EA + AIR + + +D
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 193 (73.0 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 39/103 (37%), Positives = 60/103 (58%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG + N+ ++ ATNRPD +DPA++RPGRLD+ + LPD + R I K
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 553 HARSMSVER--DIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 593
+ R V + D+ E LA++ +GA++ +C A AIR
Sbjct: 660 NLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 702
Score = 178 (67.7 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
+ M+EL + P F +G++PP+G+LL+GPPGTGKTL ARAVAN T A F + G E++
Sbjct: 217 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 276
Query: 169 KYVGE 173
K GE
Sbjct: 277 KLAGE 281
Score = 164 (62.8 bits), Expect = 4.5e-25, Sum P(3) = 4.5e-25
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 107 EVQRTMLELIN----QPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 162
+V+R + EL+ P+KF+ G+ P KGVL +GPPG GKTL A+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 163 GSELVQKYVGE 173
G EL+ + GE
Sbjct: 544 GPELLTMWFGE 554
Score = 88 (36.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVETPLLH 500
E +V Y DIGGC++Q+ +++E+VE PL H
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRH 226
Score = 82 (33.9 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 461 DPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHLDGF 504
+P+ V E P VT+ DIGG ++ +L+E+V+ P+ H D F
Sbjct: 460 NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Score = 61 (26.5 bits), Expect = 4.5e-25, Sum P(3) = 4.5e-25
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 27 GHKNIARGAVANRTDACFIRVIGSELVQKYVGE 59
G IAR AVAN T A F + G E++ K GE
Sbjct: 250 GKTLIAR-AVANETGAFFFLINGPEIMSKLAGE 281
Score = 56 (24.8 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 54 (24.1 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + A+AN A FI + G EL+ + GE
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGE 554
Score = 51 (23.0 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
A+AN A FI + G EL+ + GE
Sbjct: 530 AIANECQANFISIKGPELLTMWFGE 554
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQVTLDEADIALLKSYGQGQYTKSIKAVEDD 408
F AK+T A E + +C++ + E+ + ++ + Q S VE+D
Sbjct: 676 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEED 727
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 239 (89.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 51/148 (34%), Positives = 84/148 (56%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF I ++ ATNRPD LDPAL+RPGR DR++
Sbjct: 276 GGHDEREQTLNQL----LVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDR 331
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR + K+HAR+ ++ +I +A P +GA++ ++ EA + A R +K
Sbjct: 332 PDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKID 391
Query: 601 EKDFLEAVNKV----ARCTKIINADSEN 624
D EA ++V A+ +++I+ N
Sbjct: 392 MSDIDEATDRVIAGPAKKSRVISEKERN 419
Score = 162 (62.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 31/61 (50%), Positives = 39/61 (63%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
++E + P KF +G PKGVLL GPPGTGKTL ARAVA F + GS+ V+ +V
Sbjct: 177 VVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFV 236
Query: 172 G 172
G
Sbjct: 237 G 237
Score = 55 (24.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 470 EEKPDVTYSDIGGCKEQIEKLREVVE 495
+EK V + D+ G E+ ++L EVVE
Sbjct: 154 DEKKKVRFRDVAGADEEKQELVEVVE 179
Score = 55 (24.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + AVA F + GS+ V+ +VG GA
Sbjct: 208 KTLLARAVAGEAGVPFFSISGSDFVEMFVGVGA 240
Score = 53 (23.7 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
AVA F + GS+ V+ +VG GA +
Sbjct: 214 AVAGEAGVPFFSISGSDFVEMFVGVGASRV 243
>ZFIN|ZDB-GENE-070912-70 [details] [associations]
symbol:tmprss3a "transmembrane protease, serine 3a"
species:7955 "Danio rerio" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008236 "serine-type peptidase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001190
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172
InterPro:IPR009003 InterPro:IPR017448 InterPro:IPR018114
Pfam:PF00057 Pfam:PF00089 Pfam:PF00530 PRINTS:PR00722
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50068 PROSITE:PS50240
PROSITE:PS50287 SMART:SM00020 SMART:SM00192 SMART:SM00202
ZFIN:ZDB-GENE-070912-70 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252
SUPFAM:SSF50494 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0005044 SUPFAM:SSF56487
GeneTree:ENSGT00700000104118 MEROPS:S01.079 OrthoDB:EOG4XH002
OMA:TLKCTAC EMBL:CR361548 IPI:IPI00769685 UniGene:Dr.116567
UniGene:Dr.156941 UniGene:Dr.157181 Ensembl:ENSDART00000134874
Uniprot:B0UXG9
Length = 543
Score = 344 (126.2 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 73/197 (37%), Positives = 106/197 (53%)
Query: 185 CGV-PNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQK 243
CG P RIVGG + ++PW V+L + CGG++I+ R++LTAAHCV
Sbjct: 288 CGSRPKFSARIVGGNLSAEGQFPWQVSLHFQNEHLCGGSIITSRWILTAAHCVYGIAYPM 347
Query: 244 DLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTV 303
+V + ++ V K++ H +Y +G DHDIAL+KL PL F V
Sbjct: 348 YWMVYAG---LTELPLNAVKAFAVEKIIYHSRYRPKGL---DHDIALMKLAQPLTFNGMV 401
Query: 304 SPVCLPQLGEKFTQ-RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLT 362
P+CLP GE+F + + GWG E+ G + VP++SN+ C Q ++ LT
Sbjct: 402 EPICLPNFGEQFEDGKMCWISGWGATEDGGDASVSQHCASVPLISNKACSQPEVYQGYLT 461
Query: 363 GNMMCAGYVEGGKDSCQ 379
M+CAGY++GG DSCQ
Sbjct: 462 AGMICAGYLDGGTDSCQ 478
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 244 (91.0 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 45/131 (34%), Positives = 80/131 (61%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ + ++ ATNRPD LDPAL+RPGR DR++ +
Sbjct: 271 GGNDEREQTLNQL----LVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISI 326
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I ++H + + ++ ++AR P +GA++ ++ E+ + A R +KV +
Sbjct: 327 PDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVT 386
Query: 601 EKDFLEAVNKV 611
+DF A +K+
Sbjct: 387 NEDFEYARDKI 397
Score = 156 (60.0 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
++E + +P+KF LG + PKG LL GPPGTGKTL A+A+A F + GS+ V+ +V
Sbjct: 172 IVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFV 231
Query: 172 G 172
G
Sbjct: 232 G 232
Score = 54 (24.1 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GS+ V+ +VG GA
Sbjct: 203 KTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGA 235
Score = 52 (23.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
A+A F + GS+ V+ +VG GA +
Sbjct: 209 AIAGEAKVPFFSISGSDFVEMFVGVGASRV 238
Score = 39 (18.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPK-YNAQGAK 282
++ H+ A + E + E +V+ L PK + G K
Sbjct: 154 VTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGK 188
>UNIPROTKB|F1NSE5 [details] [associations]
symbol:PRSS56 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 GeneTree:ENSGT00700000104440
EMBL:AADN02020672 EMBL:AADN02020673 IPI:IPI00589282
Ensembl:ENSGALT00000007102 OMA:FNPKTFH ArrayExpress:F1NSE5
Uniprot:F1NSE5
Length = 272
Score = 326 (119.8 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 75/190 (39%), Positives = 104/190 (54%)
Query: 193 RIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVVISEH 252
RI+GG +PW+V++ G+ CGG L+S + LTAAHC ++ + VV+ +H
Sbjct: 1 RIMGGNVARHGAWPWLVSVRLHGELVCGGVLVSRAWALTAAHCFNGNQNELAWTVVVGDH 60
Query: 253 N--RATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCLPQ 310
+A E + RR+V HPK+N K+ D+ALL+L PL TVSPVCLP
Sbjct: 61 ELGKADPGERAVPVRRIVP---HPKFNP---KTFHGDLALLELAEPLAPSGTVSPVCLPS 114
Query: 311 LGEKFTQRTGT-VVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTGNMMCAG 369
+ + T + GWG + E G A + QVP++S + CR G E LT M CAG
Sbjct: 115 GTTEPSPGTPCHIAGWGSLYEEGPSAEVVMEAQVPLLSQETCRAALGREL-LTSTMFCAG 173
Query: 370 YVEGGKDSCQ 379
Y+ GG DSCQ
Sbjct: 174 YLSGGIDSCQ 183
>UNIPROTKB|F1MUB9 [details] [associations]
symbol:PRSS8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010765 "positive regulation of sodium ion transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114
Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135
PROSITE:PS50240 SMART:SM00020 GO:GO:0005886 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 GO:GO:0010765
GeneTree:ENSGT00700000104471 EMBL:DAAA02057919 IPI:IPI00706481
UniGene:Bt.46193 Ensembl:ENSBTAT00000037413 OMA:GPRWLEA
Uniprot:F1MUB9
Length = 343
Score = 326 (119.8 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 73/207 (35%), Positives = 112/207 (54%)
Query: 183 EGCG-VPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKR 241
+ CG VP RI GG T + ++PW V++ G CGG+L+SD++VL+AAHC S +
Sbjct: 36 DSCGMVPQ--GRITGGTTAALGQWPWQVSINHHGTHVCGGSLVSDQWVLSAAHCFPSDNK 93
Query: 242 QKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKP 301
++ V + H + + T + R V +V++H KY+ +G+ DIALL+L + + F
Sbjct: 94 IEEYEVKLGAH-QLDYFSTDTQVRGVAQVISHEKYSHEGSMG---DIALLQLSSSVTFSR 149
Query: 302 TVSPVCLPQLGEKFTQRTGTVV-GWGRVEESGQIASD--LRATQVPVMSNQECRQFPGFE 358
+ P+CLP F VV GWG V S + L+ +VP++S + C
Sbjct: 150 YIRPICLPAANASFPNGLQCVVTGWGHVAPSVSLQHPRPLQQLEVPLISRETCNCLYNIN 209
Query: 359 AK------LTGNMMCAGYVEGGKDSCQ 379
AK + +M+CAGYV G KD+CQ
Sbjct: 210 AKPGEPHVIDQDMLCAGYVNGSKDACQ 236
>UNIPROTKB|Q16651 [details] [associations]
symbol:PRSS8 "Prostasin" species:9606 "Homo sapiens"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0010765 "positive regulation of sodium
ion transport" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005576
"extracellular region" evidence=TAS] [GO:0008236 "serine-type
peptidase activity" evidence=TAS] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114
Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135
PROSITE:PS50240 SMART:SM00020 GO:GO:0016021 GO:GO:0005886
GO:GO:0017080 GO:GO:0005615 GO:GO:0042493 GO:GO:0051385
GO:GO:0043434 GO:GO:0006508 GO:GO:0004252 GO:GO:0008236
SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 GO:GO:0010765
HOGENOM:HOG000251820 PDB:3GYM PDBsum:3GYM EMBL:L41351 EMBL:U33446
EMBL:BC001462 IPI:IPI00329538 PIR:A57014 RefSeq:NP_002764.1
UniGene:Hs.75799 PDB:3DFJ PDB:3DFL PDB:3E0N PDB:3E0P PDB:3E16
PDB:3E1X PDB:3FVF PDB:3GYL PDBsum:3DFJ PDBsum:3DFL PDBsum:3E0N
PDBsum:3E0P PDBsum:3E16 PDBsum:3E1X PDBsum:3FVF PDBsum:3GYL
ProteinModelPortal:Q16651 SMR:Q16651 MINT:MINT-5000236
STRING:Q16651 MEROPS:S01.159 DMDM:2833277 PaxDb:Q16651 PRIDE:Q16651
DNASU:5652 Ensembl:ENST00000317508 GeneID:5652 KEGG:hsa:5652
UCSC:uc002ebc.4 CTD:5652 GeneCards:GC16M031142 HGNC:HGNC:9491
HPA:HPA030436 MIM:600823 neXtProt:NX_Q16651 PharmGKB:PA33840
InParanoid:Q16651 KO:K08664 OMA:HFVQEDM OrthoDB:EOG4FN4J9
BindingDB:Q16651 ChEMBL:CHEMBL5610 ChiTaRS:PRSS8
EvolutionaryTrace:Q16651 GenomeRNAi:5652 NextBio:21962
ArrayExpress:Q16651 Bgee:Q16651 CleanEx:HS_PRSS8
Genevestigator:Q16651 GermOnline:ENSG00000052344 Uniprot:Q16651
Length = 343
Score = 326 (119.8 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 77/231 (33%), Positives = 121/231 (52%)
Query: 162 IGSELVQKYVGERVLMEGCNNEG----CGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKF 217
+G+ + Y+G +L G EG CGV + RI GG + ++PW V++ G
Sbjct: 12 LGAVAILLYLG--LLRSGTGAEGAEAPCGVAPQA-RITGGSSAVAGQWPWQVSITYEGVH 68
Query: 218 FCGGTLISDRYVLTAAHCVRSSKRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYN 277
CGG+L+S+++VL+AAHC S ++ V + H + Y + + ++ HP Y
Sbjct: 69 VCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDS-YSEDAKVSTLKDIIPHPSYL 127
Query: 278 AQGAKSHDHDIALLKLDTPLEFKPTVSPVCLPQLGEKFTQRTG-TVVGWGRVEESGQIAS 336
+G++ DIALL+L P+ F + P+CLP F TV GWG V S + +
Sbjct: 128 QEGSQG---DIALLQLSRPITFSRYIRPICLPAANASFPNGLHCTVTGWGHVAPSVSLLT 184
Query: 337 D--LRATQVPVMSNQECRQFPGFEAK------LTGNMMCAGYVEGGKDSCQ 379
L+ +VP++S + C +AK + +M+CAGYVEGGKD+CQ
Sbjct: 185 PKPLQQLEVPLISRETCNCLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQ 235
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 227 (85.0 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 49/134 (36%), Positives = 75/134 (55%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R VV L +DG RG + V+ ATNR +++DPAL R GR DR+++ G+PD GR I
Sbjct: 325 RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEIL 384
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNK 610
+IH ++M + D++ E LA GA++ +CTEA + IR + V +D E ++K
Sbjct: 385 RIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLED--EIIDK 442
Query: 611 VARCTKIINADSEN 624
+ + D N
Sbjct: 443 EVLESMCVTQDHFN 456
Score = 178 (67.7 bits), Expect = 3.4e-27, Sum P(3) = 3.4e-27
Identities = 43/120 (35%), Positives = 63/120 (52%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG P+ N+ + ATNRP+ LD AL+RPGRLD+ + LPDL R I
Sbjct: 603 VMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTA 662
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR--RKVASEKDFLEAVNK 610
R V ++ + LA+ +GA++ +C A AIR + ++K LE NK
Sbjct: 663 ILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAIDAEEMNKKSKLELSNK 722
Score = 176 (67.0 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R M+EL + P F LG++PP+GVLL+GPPG+GKT ARAVAN T A F + G E++
Sbjct: 220 REMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMS 279
Query: 169 KYVGE 173
K GE
Sbjct: 280 KMAGE 284
Score = 158 (60.7 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 106 NEVQRTMLELI----NQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 161
+EV+ T+ E+I + P+KF G+ P +GVL +GPPG GKTL A+AVA+ A F+ +
Sbjct: 486 DEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSI 545
Query: 162 IGSELVQKYVGE 173
G EL+ + GE
Sbjct: 546 KGPELLTMWFGE 557
Score = 98 (39.6 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 470 EEKPD-VTYSDIGGCKEQIEKLREVVETPLLH 500
EEK D + Y DIGGCK+Q+ ++RE++E PL H
Sbjct: 198 EEKLDEIGYDDIGGCKKQLAQIREMIELPLRH 229
Score = 86 (35.3 bits), Expect = 3.4e-27, Sum P(3) = 3.4e-27
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 434 LWDLTADKQTLQNEQPLQIHIPLP-PKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLRE 492
L D DK+ L++ Q H + +P+ V E P+V + DIGG E LRE
Sbjct: 435 LEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLRE 494
Query: 493 VVETPLLHLDGFDPRG 508
++ P+ H D F+ G
Sbjct: 495 MILYPIDHPDKFEKFG 510
Score = 83 (34.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/76 (31%), Positives = 35/76 (46%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+DL D + ++ E M V D + P + TV E P+V + DIGG
Sbjct: 432 VIDLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVV-----EVPNVKWDDIGGLD 486
Query: 698 EQIEKLREVVETPLLH 713
E LRE++ P+ H
Sbjct: 487 EVKSTLREMILYPIDH 502
Score = 64 (27.6 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 26 NGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAVAN 64
+G IAR AVAN T A F + G E++ K GE A AN
Sbjct: 252 SGKTCIAR-AVANETGAFFFLINGPEVMSKMAGE-AEAN 288
Score = 55 (24.4 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 260 AVANETGAFFFLINGPEVMSKMAGE 284
Score = 49 (22.3 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + AVA+ A F+ + G EL+ + GE
Sbjct: 527 KTLLAKAVASECSANFVSIKGPELLTMWFGE 557
Score = 46 (21.3 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVA+ A F+ + G EL+ + GE
Sbjct: 533 AVASECSANFVSIKGPELLTMWFGE 557
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 227 (85.0 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 49/134 (36%), Positives = 75/134 (55%)
Query: 491 REVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIF 550
R VV L +DG RG + V+ ATNR +++DPAL R GR DR+++ G+PD GR I
Sbjct: 325 RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEIL 384
Query: 551 KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVASEKDFLEAVNK 610
+IH ++M + D++ E LA GA++ +CTEA + IR + V +D E ++K
Sbjct: 385 RIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLED--EIIDK 442
Query: 611 VARCTKIINADSEN 624
+ + D N
Sbjct: 443 EVLESMCVTQDHFN 456
Score = 178 (67.7 bits), Expect = 3.4e-27, Sum P(3) = 3.4e-27
Identities = 43/120 (35%), Positives = 63/120 (52%)
Query: 493 VVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKI 552
V+ L +DG P+ N+ + ATNRP+ LD AL+RPGRLD+ + LPDL R I
Sbjct: 603 VMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTA 662
Query: 553 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR--RKVASEKDFLEAVNK 610
R V ++ + LA+ +GA++ +C A AIR + ++K LE NK
Sbjct: 663 ILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAIDAEEMNKKSKLELSNK 722
Score = 176 (67.0 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 110 RTMLEL-INQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 168
R M+EL + P F LG++PP+GVLL+GPPG+GKT ARAVAN T A F + G E++
Sbjct: 220 REMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMS 279
Query: 169 KYVGE 173
K GE
Sbjct: 280 KMAGE 284
Score = 158 (60.7 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 106 NEVQRTMLELI----NQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 161
+EV+ T+ E+I + P+KF G+ P +GVL +GPPG GKTL A+AVA+ A F+ +
Sbjct: 486 DEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSI 545
Query: 162 IGSELVQKYVGE 173
G EL+ + GE
Sbjct: 546 KGPELLTMWFGE 557
Score = 98 (39.6 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 470 EEKPD-VTYSDIGGCKEQIEKLREVVETPLLH 500
EEK D + Y DIGGCK+Q+ ++RE++E PL H
Sbjct: 198 EEKLDEIGYDDIGGCKKQLAQIREMIELPLRH 229
Score = 86 (35.3 bits), Expect = 3.4e-27, Sum P(3) = 3.4e-27
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 434 LWDLTADKQTLQNEQPLQIHIPLP-PKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLRE 492
L D DK+ L++ Q H + +P+ V E P+V + DIGG E LRE
Sbjct: 435 LEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLRE 494
Query: 493 VVETPLLHLDGFDPRG 508
++ P+ H D F+ G
Sbjct: 495 MILYPIDHPDKFEKFG 510
Score = 83 (34.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 24/76 (31%), Positives = 35/76 (46%)
Query: 638 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCK 697
V+DL D + ++ E M V D + P + TV E P+V + DIGG
Sbjct: 432 VIDLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVV-----EVPNVKWDDIGGLD 486
Query: 698 EQIEKLREVVETPLLH 713
E LRE++ P+ H
Sbjct: 487 EVKSTLREMILYPIDH 502
Score = 64 (27.6 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 26 NGHKNIARGAVANRTDACFIRVIGSELVQKYVGEGAVAN 64
+G IAR AVAN T A F + G E++ K GE A AN
Sbjct: 252 SGKTCIAR-AVANETGAFFFLINGPEVMSKMAGE-AEAN 288
Score = 55 (24.4 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVAN T A F + G E++ K GE
Sbjct: 260 AVANETGAFFFLINGPEVMSKMAGE 284
Score = 49 (22.3 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGE 59
K + AVA+ A F+ + G EL+ + GE
Sbjct: 527 KTLLAKAVASECSANFVSIKGPELLTMWFGE 557
Score = 46 (21.3 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGE 85
AVA+ A F+ + G EL+ + GE
Sbjct: 533 AVASECSANFVSIKGPELLTMWFGE 557
>UNIPROTKB|F1NZZ9 [details] [associations]
symbol:OVCH2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 GeneTree:ENSGT00700000104440 OMA:LHYPEDY
EMBL:AADN02030629 IPI:IPI00571825 ProteinModelPortal:F1NZZ9
Ensembl:ENSGALT00000008522 Uniprot:F1NZZ9
Length = 805
Score = 348 (127.6 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 74/194 (38%), Positives = 111/194 (57%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
N RIVGG + +PW V+L++ K FCGGT++S ++V+TAAHCV K L V
Sbjct: 16 NLFTRIVGGNQVKQGSHPWQVSLKRREKHFCGGTIVSAQWVVTAAHCVSDRNLLKYLNVT 75
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EH+ + E +T V ++ HP ++ + + ++DIALLKLD F +V P CL
Sbjct: 76 AGEHD-LRIRENGEQTLPVKYIIKHPNFDPR--RPMNYDIALLKLDGTFNFSSSVLPACL 132
Query: 309 PQLGEKFTQR-TGTVVGWGRVEESGQIASDLRATQVPVMSNQEC-RQFPGFEAKLTGN-M 365
P GEKF T GWGR+ E+G + L +P++++ EC R + G+ +
Sbjct: 133 PDPGEKFEAGYICTACGWGRLRENGVLPQVLYEVNLPILNSMECSRALSTLRKPIQGDTI 192
Query: 366 MCAGYVEGGKDSCQ 379
+CAG+ +GGKD+CQ
Sbjct: 193 LCAGFPDGGKDACQ 206
Score = 318 (117.0 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 84/261 (32%), Positives = 136/261 (52%)
Query: 153 RTDACFIRVIGSE-LVQKYVGERVLMEGCN---NEGCGVPNRM-----DRIVGGWTTEVN 203
R F+ V GS LV+ + + E ++ CG+P+ RI+GG +
Sbjct: 516 RATITFVHVTGSRILVEVFENTDMTEEEIQVTTDDVCGMPSNQPRFIFSRIIGGEEAVPH 575
Query: 204 EYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVVISEHNRATVYETQIE 263
+PW V+++ + + CGG +++ +V+TAAHC S + +DL +V++ + T E + +
Sbjct: 576 SWPWQVSIQISDQHICGGAVLAKEWVITAAHCFNSKELYRDLWMVVTGIHDLTEQEYR-Q 634
Query: 264 TRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCLPQLGEKFTQRTGT-- 321
R V + + HP +N + D DIALL+L PLEF V PVCLP E+ Q +
Sbjct: 635 KRSVKQYIIHPSFNKT---TMDSDIALLQLAEPLEFNHYVHPVCLPAK-EEVVQPSSVCI 690
Query: 322 VVGWGRVEESGQIASDLRATQVPVMSNQECRQFP-GFEAKLTGNMMCAGY-VEGGKDSCQ 379
+ GWG EE + + L +VP++ + C+ + +++T M+CAG+ +E GKDSC
Sbjct: 691 ITGWGAQEEDREKSKKLYQLEVPILMLEACQTYYINLPSRVTQRMICAGFPLEEGKDSC- 749
Query: 380 VTLDEADIALLKSY-GQGQYT 399
T D + S G G YT
Sbjct: 750 -TGDSGGPLVCPSEDGSGFYT 769
>ZFIN|ZDB-GENE-030131-7092 [details] [associations]
symbol:wu:fk80d04 "wu:fk80d04" species:7955 "Danio
rerio" [GO:0030247 "polysaccharide binding" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006955 "immune
response" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005044 "scavenger receptor activity"
evidence=IEA] InterPro:IPR001212 InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114
Pfam:PF00089 Pfam:PF01033 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 PROSITE:PS50958 SMART:SM00020
SMART:SM00201 ZFIN:ZDB-GENE-030131-7092 GO:GO:0006955 GO:GO:0030247
GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 GO:GO:0005044
GeneTree:ENSGT00700000104123 EMBL:CR936541 IPI:IPI00961536
Ensembl:ENSDART00000104096 OMA:ICAGLTE Uniprot:E7F2C1
Length = 328
Score = 324 (119.1 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 73/202 (36%), Positives = 108/202 (53%)
Query: 185 CGVPNRMDRIVGGWTTEVNEYPWVVALEQA--GKFFCGGTLISDRYVLTAAHCVRSSKRQ 242
CG RIVGG +PW V+L G FCGG+LIS +VLTAAHC+ S +
Sbjct: 25 CGQAPLNTRIVGGVNASPGSWPWQVSLHSPKYGGHFCGGSLISSEWVLTAAHCL-SGVSE 83
Query: 243 KDLIVVISEHNRA--TVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFK 300
L+V + + +YET +R V K+ H YN+ ++D+DIALL+L + + F
Sbjct: 84 TTLVVYLGRRTQQGINIYET---SRNVAKLFVHSSYNSN---TNDNDIALLRLSSAVTFT 137
Query: 301 PTVSPVCLPQLGEKFTQRTGT-VVGWGRVEESGQIASD--LRATQVPVMSNQECRQFPGF 357
+ PVCL ++ T + + GWG + + + L+ T +PV++N C G
Sbjct: 138 NYIRPVCLAAQNSVYSAGTSSWITGWGDIRAGVNLPAPGILQETMIPVVANDRCNALLG- 196
Query: 358 EAKLTGNMMCAGYVEGGKDSCQ 379
+T NM+CAG +GGKD+CQ
Sbjct: 197 SGTVTNNMICAGLAKGGKDTCQ 218
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 234 (87.4 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 47/132 (35%), Positives = 79/132 (59%)
Query: 480 IGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFG 539
IGG ++ E + + L +DGF+ + V+ ATNR D LD AL+RPGR DR+V
Sbjct: 339 IGGGNDERE---QTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVD 395
Query: 540 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA 599
+PD++GRT I K+HA + + D+ E++A P +GA++ ++ EA + A R R
Sbjct: 396 VPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSI 455
Query: 600 SEKDFLEAVNKV 611
S K+ ++++++
Sbjct: 456 SSKEIDDSIDRI 467
Score = 164 (62.8 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 112 MLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYV 171
++E + +PE+F +G + PKGVLL GPPGTGKTL A+A+A F + GSE V+ +V
Sbjct: 242 VVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFV 301
Query: 172 G 172
G
Sbjct: 302 G 302
Score = 57 (25.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A F + GSE V+ +VG GA
Sbjct: 273 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA 305
Score = 56 (24.8 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 45 IRVIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGARMI 90
+ +IG K + A+A F + GSE V+ +VG GA +
Sbjct: 263 VLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRV 308
>UNIPROTKB|F1NY88 [details] [associations]
symbol:TMPRSS2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR001190 InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003
InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00057 Pfam:PF00089
PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50068
PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00192
SMART:SM00202 GO:GO:0005886 GO:GO:0005737 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0005044 SUPFAM:SSF56487
GeneTree:ENSGT00700000104118 OMA:FYSSQGI EMBL:AADN02010841
EMBL:AADN02010842 IPI:IPI00573994 ProteinModelPortal:F1NY88
Ensembl:ENSGALT00000026003 Uniprot:F1NY88
Length = 487
Score = 336 (123.3 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 71/203 (34%), Positives = 111/203 (54%)
Query: 185 CGVPNR----MDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSK 240
CG+P + M RIVGG + ++PW V+L CGG++I+ +++TAAHCV
Sbjct: 238 CGLPTKSTAVMSRIVGGSMASLGQWPWQVSLHVQDTHVCGGSIITREWLVTAAHCVEGLF 297
Query: 241 RQKDLIVVISEHNRATVYETQIETR---RVVKVLTHPKYNAQGAKSHDHDIALLKLDTPL 297
+ V + + + ++ +R RV K+++HP Y+ S D+D+AL+KL+TPL
Sbjct: 298 SDPYIWSVYA----GILSQNEMHSRPGYRVQKIISHPNYDTD---SKDNDVALMKLETPL 350
Query: 298 EFKPTVSPVCLPQLGEKFTQRTGT-VVGWGRVEESGQIASDLRATQVPVMSNQECRQFPG 356
F T+ PVCLP G F + GWG + G+ A+DL VP++ C
Sbjct: 351 SFTNTIRPVCLPNPGMMFQPNQQCWISGWGAEYQGGKTANDLNYVMVPLIERSTCNSVYV 410
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQ 379
++ + M+CAGY++GG DSCQ
Sbjct: 411 YDGMVLPTMVCAGYLQGGIDSCQ 433
>UNIPROTKB|P16293 [details] [associations]
symbol:F9 "Coagulation factor IX" species:9823 "Sus scrofa"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR000294 InterPro:IPR000742 InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR001881 InterPro:IPR009003
InterPro:IPR012224 InterPro:IPR018097 InterPro:IPR018114
Pfam:PF00008 Pfam:PF00089 Pfam:PF00594 PIRSF:PIRSF001143
PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50240
PROSITE:PS50998 SMART:SM00020 SMART:SM00069 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005576 GO:GO:0007596
GO:GO:0006508 GO:GO:0005509 GO:GO:0004252 InterPro:IPR013032
PROSITE:PS00022 SUPFAM:SSF50494 HOVERGEN:HBG013304 PROSITE:PS01186
PROSITE:PS00010 Gene3D:4.10.740.10 InterPro:IPR017857
SUPFAM:SSF57630 MEROPS:S01.214 EMBL:U51135 EMBL:M26235 EMBL:X92427
EMBL:X92593 PIR:I46580 UniGene:Ssc.16252 PDB:1PFX PDB:1X7A
PDBsum:1PFX PDBsum:1X7A ProteinModelPortal:P16293 SMR:P16293
STRING:P16293 eggNOG:NOG145536 EvolutionaryTrace:P16293
Uniprot:P16293
Length = 409
Score = 322 (118.4 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 71/191 (37%), Positives = 109/191 (57%)
Query: 193 RIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVVISEH 252
RIVGG + ++PW V L FCGG++I++++V+TAAHC+ + + VV E+
Sbjct: 182 RIVGGENAKPGQFPWQVLLNGKIDAFCGGSIINEKWVVTAAHCIEPGVK---ITVVAGEY 238
Query: 253 NRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCLPQLG 312
N T+ + R V++ + H YNA K + HDIALL+LD PL V+P+C+
Sbjct: 239 NTEETEPTE-QRRNVIRAIPHHSYNATVNK-YSHDIALLELDEPLTLNSYVTPICIAD-- 294
Query: 313 EKFTQ-----RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTGNMMC 367
+++T +G V GWGRV G+ A+ L+ +VP++ C + + + NM C
Sbjct: 295 KEYTNIFLKFGSGYVSGWGRVFNRGRSATILQYLKVPLVDRATCLR--STKVTIYSNMFC 352
Query: 368 AGYVEGGKDSC 378
AG+ EGGKDSC
Sbjct: 353 AGFHEGGKDSC 363
>RGD|708437 [details] [associations]
symbol:Prss3 "protease, serine, 3" species:10116 "Rattus
norvegicus" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007586 "digestion"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 RGD:708437
GO:GO:0005615 GO:GO:0046872 GO:GO:0007586 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304
HOGENOM:HOG000251820 MEROPS:S01.151 KO:K01312 OrthoDB:EOG4SJ5FV
CTD:5646 EMBL:M16624 IPI:IPI00211212 PIR:A27547 RefSeq:NP_775150.1
UniGene:Rn.9817 ProteinModelPortal:P08426 SMR:P08426 STRING:P08426
PhosphoSite:P08426 PRIDE:P08426 GeneID:286911 KEGG:rno:286911
UCSC:RGD:708437 InParanoid:P08426 NextBio:625019
Genevestigator:P08426 GermOnline:ENSRNOG00000013382 Uniprot:P08426
Length = 247
Score = 322 (118.4 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 78/191 (40%), Positives = 110/191 (57%)
Query: 192 DRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVVISE 251
D+IVGG+T + N P+ V+L AG FCGG+LI+ ++V++AAHC +S + V + E
Sbjct: 23 DKIVGGYTCQKNSLPYQVSLN-AGYHFCGGSLINSQWVVSAAHCYKSR-----IQVRLGE 76
Query: 252 HNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCLPQ- 310
HN V E + K++ HP YNA + D+DI L+KL++P VS V LP+
Sbjct: 77 HN-IDVVEGGEQFIDAAKIIRHPSYNAN---TFDNDIMLIKLNSPATLNSRVSTVSLPRS 132
Query: 311 LGEKFTQRTGTVVGWGRVEESG-QIASDLRATQVPVMSNQECRQ-FPGFEAKLTGNMMCA 368
G T+ V GWG SG S L+ PV+S+ C+ +PG K+T NM C
Sbjct: 133 CGSSGTKCL--VSGWGNTLSSGTNYPSLLQCLDAPVLSDSSCKSSYPG---KITSNMFCL 187
Query: 369 GYVEGGKDSCQ 379
G++EGGKDSCQ
Sbjct: 188 GFLEGGKDSCQ 198
>UNIPROTKB|P08426 [details] [associations]
symbol:Try3 "Cationic trypsin-3" species:10116 "Rattus
norvegicus" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 RGD:708437
GO:GO:0005615 GO:GO:0046872 GO:GO:0007586 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304
HOGENOM:HOG000251820 MEROPS:S01.151 KO:K01312 OrthoDB:EOG4SJ5FV
CTD:5646 EMBL:M16624 IPI:IPI00211212 PIR:A27547 RefSeq:NP_775150.1
UniGene:Rn.9817 ProteinModelPortal:P08426 SMR:P08426 STRING:P08426
PhosphoSite:P08426 PRIDE:P08426 GeneID:286911 KEGG:rno:286911
UCSC:RGD:708437 InParanoid:P08426 NextBio:625019
Genevestigator:P08426 GermOnline:ENSRNOG00000013382 Uniprot:P08426
Length = 247
Score = 322 (118.4 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 78/191 (40%), Positives = 110/191 (57%)
Query: 192 DRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVVISE 251
D+IVGG+T + N P+ V+L AG FCGG+LI+ ++V++AAHC +S + V + E
Sbjct: 23 DKIVGGYTCQKNSLPYQVSLN-AGYHFCGGSLINSQWVVSAAHCYKSR-----IQVRLGE 76
Query: 252 HNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCLPQ- 310
HN V E + K++ HP YNA + D+DI L+KL++P VS V LP+
Sbjct: 77 HN-IDVVEGGEQFIDAAKIIRHPSYNAN---TFDNDIMLIKLNSPATLNSRVSTVSLPRS 132
Query: 311 LGEKFTQRTGTVVGWGRVEESG-QIASDLRATQVPVMSNQECRQ-FPGFEAKLTGNMMCA 368
G T+ V GWG SG S L+ PV+S+ C+ +PG K+T NM C
Sbjct: 133 CGSSGTKCL--VSGWGNTLSSGTNYPSLLQCLDAPVLSDSSCKSSYPG---KITSNMFCL 187
Query: 369 GYVEGGKDSCQ 379
G++EGGKDSCQ
Sbjct: 188 GFLEGGKDSCQ 198
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 249 (92.7 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 49/131 (37%), Positives = 80/131 (61%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ + ++ ATNRPD LDPAL+RPGR DR+V +
Sbjct: 272 GGNDEREQTLNQL----LVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISI 327
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I +HA+ + + D+ ++AR P +GA++ ++ EA + A R +K+ +
Sbjct: 328 PDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVT 387
Query: 601 EKDFLEAVNKV 611
DF A +KV
Sbjct: 388 MCDFEYARDKV 398
Score = 145 (56.1 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 74 IGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELIN---QPEKFVNLGIEPP 130
+G + AR++ E + ++E+++ +KF LG + P
Sbjct: 132 LGGNRTMGFSKSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIP 191
Query: 131 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
KG LL G PGTGKTL ARA+A + F + GS+ V+ +VG
Sbjct: 192 KGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVG 233
Score = 59 (25.8 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 47 VIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGARMI 90
+IGS K + A+A + F + GS+ V+ +VG GA +
Sbjct: 196 LIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRV 239
Score = 56 (24.8 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A + F + GS+ V+ +VG GA
Sbjct: 204 KTLLARAIAGEANVPFFSISGSDFVEMFVGVGA 236
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 249 (92.7 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 49/131 (37%), Positives = 80/131 (61%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG E+ + L ++ L+ +DGF+ + ++ ATNRPD LDPAL+RPGR DR+V +
Sbjct: 272 GGNDEREQTLNQL----LVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISI 327
Query: 541 PDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAS 600
PD+ GR I +HA+ + + D+ ++AR P +GA++ ++ EA + A R +K+ +
Sbjct: 328 PDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVT 387
Query: 601 EKDFLEAVNKV 611
DF A +KV
Sbjct: 388 MCDFEYARDKV 398
Score = 145 (56.1 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 74 IGSELVQKYVGEGARMIXXXXXXXXXXXXXXXNEVQRTMLELIN---QPEKFVNLGIEPP 130
+G + AR++ E + ++E+++ +KF LG + P
Sbjct: 132 LGGNRTMGFSKSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIP 191
Query: 131 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 172
KG LL G PGTGKTL ARA+A + F + GS+ V+ +VG
Sbjct: 192 KGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVG 233
Score = 59 (25.8 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 47 VIGSELVQKYVGEGAVANRTDACFIRVIGSELVQKYVGEGARMI 90
+IGS K + A+A + F + GS+ V+ +VG GA +
Sbjct: 196 LIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRV 239
Score = 56 (24.8 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + A+A + F + GS+ V+ +VG GA
Sbjct: 204 KTLLARAIAGEANVPFFSISGSDFVEMFVGVGA 236
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 257 (95.5 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 51/132 (38%), Positives = 81/132 (61%)
Query: 481 GGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 540
GG ++ + L+ +DGF P N+ VL ATNRPD LD AL+RPGR DR++
Sbjct: 413 GGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQITIDN 472
Query: 541 PDLEGRTHIFKIHARSMSVERDIRF-ELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA 599
PDL+ R IF++H ++ +++ I + E L++L P +GA+I +VC EA + A R ++
Sbjct: 473 PDLKSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARRHAEII 532
Query: 600 SEKDFLEAVNKV 611
+ + F AV++V
Sbjct: 533 TLEHFDAAVDRV 544
Score = 140 (54.3 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E++ + + P+KF ++G + P+G +L GPPGTGKTL A+A A + F GS+
Sbjct: 313 EIEE-FVNFLKNPKKFHDIGAKIPRGAILVGPPGTGKTLIAKATAGEANVPFYSTSGSDF 371
Query: 167 VQKYVG 172
V+ +VG
Sbjct: 372 VEMFVG 377
Score = 46 (21.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 3 ELINQIHISQTFNNISVK-PLD-IFNGH----KNIARGAVANRTDACFIRVIGSELVQKY 56
E +N + + F++I K P I G K + A A + F GS+ V+ +
Sbjct: 316 EFVNFLKNPKKFHDIGAKIPRGAILVGPPGTGKTLIAKATAGEANVPFYSTSGSDFVEMF 375
Query: 57 VGEG 60
VG G
Sbjct: 376 VGVG 379
Score = 42 (19.8 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEG 86
A A + F GS+ V+ +VG G
Sbjct: 354 ATAGEANVPFYSTSGSDFVEMFVGVG 379
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 230 (86.0 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 53/152 (34%), Positives = 84/152 (55%)
Query: 480 IGGCKEQIEKLREVVETPLLHLDGFDPRGN-IKVLMATNRPDTLDPALMRPGRLDRKVEF 538
+GG E+ + L ++ L +DGF + + VL ATNRP+ LD AL+RPGR DR+V
Sbjct: 292 MGGNDEREQTLNQL----LAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQVLV 347
Query: 539 GLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 598
PD +GR I K+H + + + ++ E +ARL GA++ ++ EA + A R +K
Sbjct: 348 DKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSKKY 407
Query: 599 ASEKDFLEAVNK-VARCTKIINADSENPKYII 629
+ D +EAV + +A K +E K I+
Sbjct: 408 VEQNDLVEAVERAIAGLEKKSRRINEKEKKIV 439
Score = 166 (63.5 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 45/150 (30%), Positives = 76/150 (50%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA---VANRTDACFIRVIGSELVQKYVGE 85
KNIA GA + F ++ S ++ ++ G +A+R + +GS ++ +G
Sbjct: 112 KNIAYGAYSETN--WFTDILFSWVLPVFIFFGIWMFLASRMQ----KNMGSSILG--IGS 163
Query: 86 GARMIXXXXXXXXXXXXXXXNEVQRTMLELIN---QPEKFVNLGIEPPKGVLLFGPPGTG 142
+++ E + + E+++ PE+++ LG + PKG+LL GPPGTG
Sbjct: 164 SKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTG 223
Query: 143 KTLCARAVANRTDACFIRVIGSELVQKYVG 172
KTL A+AVA D F V GS ++ +VG
Sbjct: 224 KTLLAKAVAGEADVPFFSVSGSSFIEMFVG 253
Score = 65 (27.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 471 EKPDVTYSDIGGCKEQIEKLREVVE 495
EKP V +SD+ G +E E+++E+V+
Sbjct: 171 EKPKVKFSDVAGVEEAKEEVKEIVD 195
Score = 60 (26.2 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + AVA D F V GS ++ +VG GA
Sbjct: 224 KTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGA 256
Score = 58 (25.5 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 61 AVANRTDACFIRVIGSELVQKYVGEGARMI 90
AVA D F V GS ++ +VG GA +
Sbjct: 230 AVAGEADVPFFSVSGSSFIEMFVGVGASRV 259
Score = 42 (19.8 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 237 RSSKRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPK 275
R ++++K IV E A + ET +RV KV P+
Sbjct: 430 RINEKEKK-IVTYHECGHALIAETTKGAKRVSKVSVIPR 467
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 246 (91.7 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 53/151 (35%), Positives = 87/151 (57%)
Query: 480 IGGCKEQIEKLREVVETPLLHLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFG 539
+GG ++ E + + L +DGF + VL ATNRPD LD AL+RPGR DR+V
Sbjct: 374 MGGGNDERE---QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 430
Query: 540 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA 599
PD+ GR I ++H+R ++ +D+ F+ +AR P TGA+++++ EA + A R K
Sbjct: 431 RPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEI 490
Query: 600 SEKDFLEAVNKVARCTKIINAD-SENPKYII 629
S+ + +A+ ++ + NA SE K ++
Sbjct: 491 SKDEISDALERIIAGPEKKNAVVSEEKKRLV 521
Score = 150 (57.9 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 107 EVQRTMLELINQPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 166
E+Q +++ + P+K+ LG + PKG LL GPPGTGKTL ARAVA F SE
Sbjct: 273 ELQE-VVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEF 331
Query: 167 VQKYVG 172
V+ +VG
Sbjct: 332 VELFVG 337
Score = 48 (22.0 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 29 KNIARGAVANRTDACFIRVIGSELVQKYVGEGA 61
K + AVA F SE V+ +VG GA
Sbjct: 308 KTLLARAVAGEAGVPFFSCAASEFVELFVGVGA 340
Score = 42 (19.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 470 EEKPD--VTYSDIGGCKEQIEKLREVVE 495
+E P+ V+++D+ G + +L+EVV+
Sbjct: 252 QEVPETGVSFADVAGADQAKLELQEVVD 279
Score = 39 (18.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 374 GKDSCQVTLDEADIA----LLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTG 421
G+ QVT+D D+A +L+ + +G K++ + D V +R TG
Sbjct: 421 GRFDRQVTVDRPDVAGRVKILQVHSRG---KAL-GKDVDFDKVARRTPGFTG 468
>UNIPROTKB|F1MFL4 [details] [associations]
symbol:F9 "Coagulation factor IXa heavy chain" species:9913
"Bos taurus" [GO:0007596 "blood coagulation" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] InterPro:IPR000294 InterPro:IPR000742
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR001881
InterPro:IPR009003 InterPro:IPR012224 InterPro:IPR018097
InterPro:IPR018114 Pfam:PF00008 Pfam:PF00089 Pfam:PF00594
PIRSF:PIRSF001143 PRINTS:PR00001 PRINTS:PR00722 PROSITE:PS00011
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50240 PROSITE:PS50998 SMART:SM00020 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0007596 GO:GO:0006508 GO:GO:0005509 GO:GO:0004252
InterPro:IPR013032 PROSITE:PS00022 SUPFAM:SSF50494 PROSITE:PS01186
PROSITE:PS00010 GeneTree:ENSGT00560000076714 Gene3D:4.10.740.10
InterPro:IPR017857 SUPFAM:SSF57630 IPI:IPI00905351 OMA:SAECTVF
EMBL:DAAA02067809 EMBL:DAAA02067810 ProteinModelPortal:F1MFL4
Ensembl:ENSBTAT00000005227 ArrayExpress:F1MFL4 Uniprot:F1MFL4
Length = 462
Score = 331 (121.6 bits), Expect = 6.0e-28, P = 6.0e-28
Identities = 73/194 (37%), Positives = 110/194 (56%)
Query: 189 NRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVV 248
+ R+VGG E ++PW V L FCGG+++++++V+TAAHC++ + + VV
Sbjct: 223 DEFSRVVGGEDAERGQFPWQVLLHGEIAAFCGGSIVNEKWVVTAAHCIKPGVK---ITVV 279
Query: 249 ISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCL 308
EHN T+ + R V++ + + YNA K + HDIALL+LD PLE V+P+C+
Sbjct: 280 AGEHNTEKPEPTE-QKRNVIRAIPYHSYNASINK-YSHDIALLELDEPLELNSYVTPICI 337
Query: 309 PQLGEK--FTQ-RTGTVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAKLTGNM 365
F + G V GWG+V G+ AS L+ +VP++ C + F + +M
Sbjct: 338 ADRDYTNIFLKFGYGYVSGWGKVFNRGRSASILQYLKVPLVDRATCLRSTKFS--IYSHM 395
Query: 366 MCAGYVEGGKDSCQ 379
CAGY EGGKDSCQ
Sbjct: 396 FCAGYHEGGKDSCQ 409
>UNIPROTKB|F1RIS0 [details] [associations]
symbol:F1RIS0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006508 "proteolysis" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003
InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134
PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 GeneTree:ENSGT00700000104052
EMBL:CU464163 Ensembl:ENSSSCT00000008507 OMA:LCAGYPK Uniprot:F1RIS0
Length = 855
Score = 344 (126.2 bits), Expect = 7.0e-28, P = 7.0e-28
Identities = 72/203 (35%), Positives = 112/203 (55%)
Query: 185 CG-VPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQK 243
CG VP RI GG ++ ++PW V++ G+ CGG+L+SD++VL+AAHC
Sbjct: 605 CGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTS 664
Query: 244 DLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTV 303
V + H + + + + R V +V++HP Y +G++ DIALL+L +P+ F +
Sbjct: 665 AYEVKLGAHQLDS-FSSSMTVRTVAQVISHPSYLQEGSEG---DIALLQLSSPVTFSRYI 720
Query: 304 SPVCLPQLGEKFTQRTG-TVVGWGRVEESGQIASDLRATQVPVMSNQECRQFPGFEAK-- 360
P+CLP F TV GWG V SG+ L+ +VP++S + C +A
Sbjct: 721 WPICLPAANASFPNGLQCTVTGWGHVAPSGERPRTLQQLEVPLISRETCNCLYNIDANPD 780
Query: 361 ----LTGNMMCAGYVEGGKDSCQ 379
+ +M+CAGYV+GGKD+CQ
Sbjct: 781 EPHFIQQDMLCAGYVKGGKDACQ 803
Score = 258 (95.9 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 67/201 (33%), Positives = 104/201 (51%)
Query: 193 RIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSS---KRQKDLIVVI 249
RI+GG +PW V+L Q G CGG+LI+ +VL+AAHC ++ + + VV+
Sbjct: 1 RIMGGSDARPGTWPWQVSLHQGGGHICGGSLIAPSWVLSAAHCFMNNGTLEPAAEWSVVL 60
Query: 250 SEHNRATVYETQIETRRVVKVLTHPKYNA--QGAKSHDHDIALLKLDTPLEFKPTVSPVC 307
H++ + R V +L Y++ QGA D+ALL+L +P P V PVC
Sbjct: 61 GVHSQDGPLDGA-HIRAVAAILVPDNYSSVEQGA-----DVALLRLASPARLGPAVRPVC 114
Query: 308 LPQLGEKFTQRTGT-VVGWGRVEESGQIASD--LRATQVPVMSNQECRQF---PG-FEA- 359
LP+ +F + T GWG V+E+ + L+ ++ ++ C+ PG F
Sbjct: 115 LPRASHRFARGTACWATGWGDVQEADPLPLPWALQEVELRLLGEAACQCLYSRPGPFNLT 174
Query: 360 -KLTGNMMCAGYVEGGKDSCQ 379
+L M+CAGY EG +D+CQ
Sbjct: 175 FQLLPGMLCAGYPEGRRDTCQ 195
Score = 148 (57.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 59/231 (25%), Positives = 98/231 (42%)
Query: 205 YPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKDLIVVISEHNRATVYETQIET 264
+PW + G C G L+S+ ++L A C S + D E N + ++
Sbjct: 306 WPWEAQVMVPGSRPCYGALVSESWLLAPASCF-SGRVSSDQPPGDLE-NWHVLLPSRPRA 363
Query: 265 RRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKPTVSPVCLPQLGEKFTQRTGT-VV 323
+V +++ H + A D+ALL+L P+ PVCLP F + +
Sbjct: 364 EQVARLVLHENASWDDAS----DLALLQLRVPVNLSAAPRPVCLPHPEHYFLPGSRCRLA 419
Query: 324 GWGRVEESGQIASDLR-ATQVPVMSNQECRQFPGFEAKLTGNMMCAGYVEGGKDSCQVTL 382
WGR ++ S + A V +++ + C ++ L +C Y EG +DSC+VT
Sbjct: 420 RWGRGVRVRRVRSPVPVAAAVSILTARLCHCL--YQGILPPGTLCVLYAEGQEDSCEVT- 476
Query: 383 DEADIALLKSYGQGQYTKSIKAVEDDIQAVIKRVNELTGIKESDTGLAPPA 433
A L ++ G G + A+ + E T I ++ LAPPA
Sbjct: 477 -SAPPLLCQTEG-GSWVLVGMALRGSRELFAAVGPEETWISQT-VALAPPA 524
>UNIPROTKB|F1Q3B8 [details] [associations]
symbol:TMPRSS11B "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR017329
InterPro:IPR018114 Pfam:PF00089 PIRSF:PIRSF037941 PRINTS:PR00722
PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020
GO:GO:0005576 GO:GO:0005887 GO:GO:0006508 GO:GO:0004252
SUPFAM:SSF50494 InterPro:IPR000082 Pfam:PF01390
GeneTree:ENSGT00700000104052 OMA:INNRCGR EMBL:AAEX03009131
Ensembl:ENSCAFT00000004496 Uniprot:F1Q3B8
Length = 420
Score = 320 (117.7 bits), Expect = 7.2e-28, P = 7.2e-28
Identities = 74/203 (36%), Positives = 110/203 (54%)
Query: 182 NEGCGVPNRM----DRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVR 237
N CG+ RM DRI GG + E+PW L++ G+ CG +LIS+RY++TAAHC +
Sbjct: 173 NNRCGIRARMSATYDRIKGGSNAQKGEWPWQATLKKNGQHHCGASLISERYLVTAAHCFQ 232
Query: 238 SSKRQKDLIVVISEHNRATVYETQIETRRVVKVLTHPKYNAQGAKSHDHDIALLKLDTPL 297
+K K+ V S R Q R V +++ H Y QG + HD DIA+++L +
Sbjct: 233 KTKNPKNYTV--SFGTRVNPPYMQ---RYVQQIIVHEDY-IQG-EHHD-DIAVIQLSEKV 284
Query: 298 EFKPTVSPVCLPQLGEKFTQRTGTVV-GWGRVEESGQIASDLRATQVPVMSNQECRQFPG 356
F+ V VCLP+ + F G VV GWG +G+ L+ V ++ C G
Sbjct: 285 LFQNDVHRVCLPEATQVFPPGEGVVVTGWGAFSYNGKYPEVLQKAPVKIIDTNTCNAREG 344
Query: 357 FEAKLTGNMMCAGYVEGGKDSCQ 379
++ ++ M+CAGY+EG KD+CQ
Sbjct: 345 YDGLVSDTMLCAGYLEGNKDACQ 367
>RGD|727870 [details] [associations]
symbol:Prss21 "protease, serine, 21" species:10116 "Rattus
norvegicus" [GO:0007283 "spermatogenesis" evidence=IEP] [GO:0008236
"serine-type peptidase activity" evidence=TAS] InterPro:IPR001254
InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114
Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135
PROSITE:PS50240 SMART:SM00020 RGD:727870 GO:GO:0006508
GO:GO:0007283 GO:GO:0004252 GO:GO:0008236 SUPFAM:SSF50494
HOVERGEN:HBG013304 EMBL:CH473948 HSSP:P00766 MEROPS:S01.011
CTD:10942 KO:K09625 EMBL:AB074516 IPI:IPI00331929
RefSeq:NP_852142.1 UniGene:Rn.60786 GeneID:353251 KEGG:rno:353251
NextBio:672631 Genevestigator:Q80Z40 Uniprot:Q80Z40
Length = 328
Score = 320 (117.7 bits), Expect = 7.2e-28, P = 7.2e-28
Identities = 74/203 (36%), Positives = 106/203 (52%)
Query: 185 CGVPNRMDRIVGGWTTEVNEYPWVVALEQAGKFFCGGTLISDRYVLTAAHCVRSSKRQKD 244
CG RIVGG E+ +PW +L G CG TL++ R+VLTAAHC + D
Sbjct: 49 CGHRTIPSRIVGGEEAELGRWPWQGSLRVWGNHLCGATLLNRRWVLTAAHCFQKDNDPFD 108
Query: 245 LIVVISE-HNRATVYETQIETRR--VVKVLTHPKYNAQGAKSHDHDIALLKLDTPLEFKP 301
V E +R +++ Q + R + + PKY Q HDIALLKL +P+ +
Sbjct: 109 WTVQFGELTSRPSLWNLQAYSNRYQIEDIFLSPKYTEQ----FPHDIALLKLSSPVTYSN 164
Query: 302 TVSPVCLPQLGEKFTQRTGT-VVGWGRV--EESGQIASDLRATQVPVMSNQECRQF---P 355
+ P+CL KF RT V GWG + +ES + ++L+ QV +++N C P
Sbjct: 165 FIQPICLLNSTYKFANRTDCWVTGWGAIGEDESLPLPNNLQEVQVAIINNTMCNHLFKKP 224
Query: 356 GFEAKLTGNMMCAGYVEGGKDSC 378
F + G+M+CAG EGGKD+C
Sbjct: 225 DFRINIWGDMVCAGSPEGGKDAC 247
WARNING: HSPs involving 1829 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 713 698 0.00082 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2079
No. of states in DFA: 616 (65 KB)
Total size of DFA: 338 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.43u 0.09s 58.52t Elapsed: 00:00:18
Total cpu time: 58.51u 0.10s 58.61t Elapsed: 00:00:18
Start: Thu Aug 15 16:07:01 2013 End: Thu Aug 15 16:07:19 2013
WARNINGS ISSUED: 2