RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6525
(360 letters)
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 45.1 bits (106), Expect = 2e-07
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSH 207
+ C C ++F +S +H Y C CGK + +L HM H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 39.7 bits (92), Expect = 2e-05
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKH 234
Y C +CGK +T + +HM H G + C C K F + LV HM+ H
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 37.4 bits (86), Expect = 1e-04
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 239 FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
+ C CGK + RHM +H GL + C +C K F K L HM+ H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 34.7 bits (79), Expect = 0.001
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 216 HCNKNFTHRALLVRHM-QKHSSERFKCDLCGKVTPYYQHYLRHMRIH 261
C K+FTH++ RHM + C +CGK H + HM+IH
Sbjct: 7 QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 33.9 bits (77), Expect = 0.002
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRH 317
C K F K HM H Y C +C K++ K L H++ H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 28.1 bits (62), Expect = 0.19
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 295 YQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLH 344
Y C C K + K ++H+ H G + Y C +CG ++ + +L H+++H
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 23.9 bits (51), Expect = 8.4
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 145 TRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKK 177
R + + C +C + F + +L H K
Sbjct: 19 DRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 39.5 bits (93), Expect = 1e-05
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
H G K Y C ECGK +++++ L QH H G
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 33.0 bits (76), Expect = 0.003
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 234 HSSER-FKCDLCGKVTPYYQHYLRHMRIHQG 263
HS E+ + C CGK ++H R+H G
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 29.9 bits (68), Expect = 0.026
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 260 IHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
IH G + + C C K F+ L H + H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 26.8 bits (60), Expect = 0.40
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 322 YKCYICGNRYATQKYLEEHIRLHQG 346
Y C CG ++ L +H R+H G
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTG 32
Score = 26.4 bits (59), Expect = 0.60
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 157 FKCDLCSRTFNSQSYLQQHKK 177
+ C C + F+ S L QH++
Sbjct: 8 YGCVECGKAFSRSSILVQHQR 28
Score = 24.9 bits (55), Expect = 1.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 295 YQCAMCKKQYASKKMLEKHIRRHEG 319
Y C C K ++ +L +H R H G
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTG 32
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 38.4 bits (90), Expect = 3e-05
Identities = 6/25 (24%), Positives = 17/25 (68%)
Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG 209
++C+ C + ++++ +L H+ +H G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 29.9 bits (68), Expect = 0.032
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 239 FKCDLCGKVTPYYQHYLRHMRIHQG 263
F+C +C + H H+R H G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 26.0 bits (58), Expect = 0.66
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 212 FICFHCNKNFTHRALLVRHMQKHS 235
F C C +NF+ L H++ H+
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHT 27
Score = 26.0 bits (58), Expect = 0.73
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 267 HECNLCAKLFACKRSLQDHMQRH 289
+C +C + F+ L H++ H
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTH 26
Score = 25.6 bits (57), Expect = 0.83
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 157 FKCDLCSRTFNSQSYLQQHKK 177
F+C +C R F+ +L H +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIR 24
Score = 25.6 bits (57), Expect = 0.87
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 322 YKCYICGNRYATQKYLEEHIRLHQG 346
++C IC ++ +L HIR H G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 24.1 bits (53), Expect = 3.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 295 YQCAMCKKQYASKKMLEKHIRRHEG 319
+QC +C + ++ L HIR H G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 38.0 bits (89), Expect = 4e-05
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG 209
+ C+ C + + + +LK+H SH
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 30.3 bits (69), Expect = 0.024
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 239 FKCDLCGKVTPYYQHYLRHMRIHQG 263
F C++C + +H RH R H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 29.1 bits (66), Expect = 0.050
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 212 FICFHCNKNFTHRALLVRHMQKHSSER 238
F+C C + F + L RH + H++E+
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 26.4 bits (59), Expect = 0.44
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 322 YKCYICGNRYATQKYLEEHIRLHQG 346
+ C +C +A Q++L+ H R H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 25.7 bits (57), Expect = 0.80
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 267 HECNLCAKLFACKRSLQDHMQRH 289
C +C + FA + L+ H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSH 25
Score = 25.7 bits (57), Expect = 0.98
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 157 FKCDLCSRTFNSQSYLQQHKK 177
F C++C+R F Q +L++H +
Sbjct: 3 FVCEVCTRAFARQEHLKRHYR 23
Score = 24.5 bits (54), Expect = 2.6
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 295 YQCAMCKKQYASKKMLEKHIRRHEG 319
+ C +C + +A ++ L++H R H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 36.1 bits (84), Expect = 2e-04
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSH 207
H G K Y+C C +TQ+ +K H+L
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 33.0 bits (76), Expect = 0.003
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
R H G + +EC +C F +++ H+ +
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 29.2 bits (66), Expect = 0.059
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 212 FICFHCNKNFTHRALLVRHMQKHSSE 237
+ C+ C+ FT + H+ + +E
Sbjct: 9 YECYICHARFTQSGTMKMHILQKHTE 34
Score = 26.9 bits (60), Expect = 0.34
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 157 FKCDLCSRTFNSQSYLQQHKKHDH 180
++C +C F ++ H H
Sbjct: 9 YECYICHARFTQSGTMKMHILQKH 32
Score = 24.9 bits (55), Expect = 1.8
Identities = 5/27 (18%), Positives = 14/27 (51%)
Query: 295 YQCAMCKKQYASKKMLEKHIRRHEGQD 321
Y+C +C ++ ++ HI + ++
Sbjct: 9 YECYICHARFTQSGTMKMHILQKHTEN 35
Score = 24.9 bits (55), Expect = 1.8
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 234 HSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEV 266
HS E+ ++C +C H+ V
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 35.4 bits (82), Expect = 3e-04
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG 209
+ C EC K + ++ +L +H+ +H+
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQN 27
Score = 30.0 bits (68), Expect = 0.030
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 239 FKCDLCGKVTPYYQHYLRHMRIHQG 263
F C C K H +H++ HQ
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQN 27
Score = 28.1 bits (63), Expect = 0.14
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 212 FICFHCNKNFTHRALLVRHMQKHSSER 238
F C C K F L +H++ H +++
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 26.5 bits (59), Expect = 0.40
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 322 YKCYICGNRYATQKYLEEHIRLHQG 346
+ C C R+ +L +HI+ HQ
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQN 27
Score = 24.6 bits (54), Expect = 2.1
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 267 HECNLCAKLFACKRSLQDHMQRH 289
C C K F L H++ H
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTH 25
Score = 24.2 bits (53), Expect = 3.0
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 295 YQCAMCKKQYASKKMLEKHIRRHEG 319
+ C C K++ L KHI+ H+
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQN 27
Score = 23.8 bits (52), Expect = 3.7
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 157 FKCDLCSRTFNSQSYLQQHKK 177
F C C + F +L +H K
Sbjct: 3 FACPECPKRFMRSDHLSKHIK 23
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 35.4 bits (82), Expect = 4e-04
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
H G K Y C C K + Q L H +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 33.5 bits (77), Expect = 0.002
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPN 293
R H G + + C+ C K F K+ L H +R+ +PN
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 30.8 bits (70), Expect = 0.017
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 212 FICFHCNKNFTHRALLVRHMQKHSSERF 239
+ C HC+K F + LL H +++ F
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYHDPNF 36
Score = 29.6 bits (67), Expect = 0.041
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 234 HSSER-FKCDLCGKVTPYYQHYLRHMRIHQG 263
H+ E+ + C C K Q H + +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 25.8 bits (57), Expect = 1.1
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 295 YQCAMCKKQYASKKMLEKHIRRHEGQDY 322
Y C+ C K + K++L+ H +R+ ++
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYHDPNF 36
Score = 25.4 bits (56), Expect = 1.5
Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 315 RRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQGHTY 349
R H G+ Y C C + ++ L+ H + + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36
Score = 25.0 bits (55), Expect = 2.0
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHE 181
+ C C +TF + L H K H+
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYHD 33
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 34.5 bits (80), Expect = 5e-04
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 185 YKCKECGKCYTQNTNLKQHMLSH 207
YKC ECGK ++QN+ L H H
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIH 25
Score = 24.9 bits (55), Expect = 1.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 239 FKCDLCGKVTPYYQHYLRHMRIH 261
+KC CGK + H RIH
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIH 25
Score = 24.1 bits (53), Expect = 2.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 157 FKCDLCSRTFNSQSYLQQHKK 177
+KC C + F+ S L H++
Sbjct: 3 YKCLECGKAFSQNSGLINHQR 23
Score = 23.3 bits (51), Expect = 5.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 212 FICFHCNKNFTHRALLVRHMQKHS 235
+ C C K F+ + L+ H + H+
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 22.9 bits (50), Expect = 8.2
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 267 HECNLCAKLFACKRSLQDHMQRH 289
++C C K F+ L +H + H
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIH 25
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 34.6 bits (80), Expect = 8e-04
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCK 188
+ C C + F+ +L H K H + +KC+
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 33.8 bits (78), Expect = 0.001
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 185 YKCKECGKCYTQNTNLKQHM 204
Y C+ CGK +++ +L H+
Sbjct: 6 YICQSCGKGFSRPDHLNGHI 25
Score = 32.7 bits (75), Expect = 0.004
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 212 FICFHCNKNFTHRALLVRHMQK-HSSER-FKCDL 243
+IC C K F+ L H+++ H+SER KC +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 29.2 bits (66), Expect = 0.063
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 239 FKCDLCGKVTPYYQHYLRHMR-IHQGLEVHECNL 271
+ C CGK H H++ +H H+C +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 28.8 bits (65), Expect = 0.090
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 267 HECNLCAKLFACKRSLQDHMQRH---EEPNKYQC 297
+ C C K F+ L H+++ E P ++C
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERP--HKC 37
Score = 25.3 bits (56), Expect = 1.5
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 295 YQCAMCKKQYASKKMLEKHIRR-HEGQD-YKC 324
Y C C K ++ L HI++ H + +KC
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 24.2 bits (53), Expect = 4.3
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 6/35 (17%)
Query: 322 YKCYICGNRYATQKYLEEHIRLHQGHT----YMCN 352
Y C CG ++ +L HI+ HT + C
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQV--HTSERPHKCQ 38
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 33.5 bits (77), Expect = 0.002
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 185 YKCKE--CGKCYTQNTNLKQHMLSHKG 209
+KC C K Y++ NLK H+ SH G
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 25.0 bits (55), Expect = 1.5
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 239 FKCD--LCGKVTPYYQHYLRHMRIHQG 263
KC C K ++ H+R H G
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 23.8 bits (52), Expect = 4.5
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 217 CNKNFTHRALLVRHMQKHSSE 237
C K+++ L H++ H+ E
Sbjct: 10 CRKSYSRLENLKTHLRSHTGE 30
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 33.6 bits (77), Expect = 0.002
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
R G++ +C C + F+ L H +RH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.2 bits (76), Expect = 0.002
Identities = 7/29 (24%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSH 207
G+K ++C +C + ++++ +L H H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.1 bits (68), Expect = 0.030
Identities = 6/33 (18%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 230 HMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIH 261
+ + + F+C C + H H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.8 bits (57), Expect = 0.99
Identities = 7/33 (21%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 313 HIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLH 344
R G ++C C ++ +L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.1 bits (55), Expect = 1.7
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 203 HMLSHKGI-FFICFHCNKNFTHRALLVRHMQKH 234
GI F C C+++F+ L H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 23.9 bits (52), Expect = 4.2
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRH 317
+ +QC C + ++ L H +RH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 33.6 bits (77), Expect = 0.002
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSH 207
G + + C+ C +T N +H+ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 28.2 bits (63), Expect = 0.12
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 234 HSSER-FKCDLCGKVTPYYQHYLRHMRIH 261
S +R F C +C + RH+++H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 26.3 bits (58), Expect = 0.66
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEE 291
G C +C F K + H++ H +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 25.5 bits (56), Expect = 1.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 212 FICFHCNKNFTHRALLVRHMQKHSSE 237
F+C C FT +A RH++ H+
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTDT 33
Score = 23.6 bits (51), Expect = 5.2
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 322 YKCYICGNRYATQKYLEEHIRLH 344
+ C IC + + T+ H+++H
Sbjct: 8 FVCRICLSAFTTKANCARHLKVH 30
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 33.2 bits (76), Expect = 0.002
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
R + ++C+ C K F+ L H + H
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 33.2 bits (76), Expect = 0.002
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 229 RHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQG 263
R + R +KCD CGK + +H R H G
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 32.4 bits (74), Expect = 0.005
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
+ + + YKC ECGK ++ +++L +H +H G
Sbjct: 2 RSEWQ-QRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 28.6 bits (64), Expect = 0.095
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 312 KHIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQG 346
+ + + YKC CG ++ L +H R H G
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 27.0 bits (60), Expect = 0.36
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 202 QHMLSHKGI-FFICFHCNKNFTHRALLVRHMQKHSSE 237
+ + + C C K+F+H + L +H + H+ E
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 25.5 bits (56), Expect = 1.4
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG 319
+ E +Y+C C K ++ L KH R H G
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 32.7 bits (75), Expect = 0.003
Identities = 7/27 (25%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 185 YKCKE--CGKCYTQNTNLKQHMLSHKG 209
Y C C + ++++ +L +H+ H G
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 24.6 bits (54), Expect = 2.2
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 239 FKCD--LCGKVTPYYQHYLRHMRIHQG 263
+ C C + RH+RIH G
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHTG 29
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 32.7 bits (75), Expect = 0.003
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 185 YKC--KECGKCYTQNTNLKQHMLSHKG 209
+ C CGK +T++ L++H +H G
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 25.7 bits (57), Expect = 0.78
Identities = 10/27 (37%), Positives = 10/27 (37%), Gaps = 2/27 (7%)
Query: 239 FKCDL--CGKVTPYYQHYLRHMRIHQG 263
F C CGK RH R H G
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 25.4 bits (56), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 212 FICFH--CNKNFTHRALLVRHMQKHSSER 238
F+C C K FT L RH + H+ E+
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 31.1 bits (71), Expect = 0.012
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 185 YKCKE--CGKCYTQNTNLKQHMLSHKG 209
Y C C K + +N +L +H SH+
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 23.4 bits (51), Expect = 6.5
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 239 FKCD--LCGKVTPYYQHYLRHMRIHQG 263
+ CD C K +RH + HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQE 30
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 30.8 bits (70), Expect = 0.012
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 185 YKCKE--CGKCYTQNTNLKQHMLSHKG 209
++C CGK ++ + NL+ H+ H G
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTHVRIHTG 29
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 31.4 bits (71), Expect = 0.014
Identities = 6/41 (14%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 170 SYLQQHKKHDHEG-VKYKCKECGKCYTQNTNLKQHMLSHKG 209
+ ++ K + + C K + + N++ H+ +H
Sbjct: 5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 27.2 bits (60), Expect = 0.43
Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 223 HRALLVRHMQKHSSER-FKCDLC--GKVTPYYQHYLRHMRIHQG 263
R + +++ K ++ F+C K + H++ H
Sbjct: 3 PRGSIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 26.0 bits (57), Expect = 0.97
Identities = 6/42 (14%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 279 KRSLQDHMQRHEE-PNKYQCAMCKKQYASKKMLEKHIRRHEG 319
+ S+ +++ + + C K + + + HI+ H
Sbjct: 4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 23.7 bits (51), Expect = 6.1
Identities = 6/42 (14%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 307 KKMLEKHIRRHEGQDYKC--YICGNRYATQKYLEEHIRLHQG 346
+ ++K+++ + ++C C + + + HI+ H
Sbjct: 4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 30.1 bits (68), Expect = 0.025
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 185 YKCKE--CGKCYTQNTNLKQHMLSHKG 209
+ C E CGK + +LK+HM H
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSD 28
Score = 27.8 bits (62), Expect = 0.17
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 212 FICFH--CNKNFTHRALLVRHMQKHSSER-FKCD 242
F C C K+F + L HM+ HS R + C+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 27.4 bits (61), Expect = 0.26
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 239 FKCD--LCGKVTPYYQHYLRHMRIHQGLEVHEC 269
F C CGK + +H HM++H + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 25.5 bits (56), Expect = 1.3
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 157 FKCD--LCSRTFNSQSYLQQHKKHDHEGVK-YKCK 188
F C C ++FN + +L++H K H + Y C+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKL-HSDTRDYICE 35
Score = 23.5 bits (51), Expect = 5.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 268 ECNLCAKLFACKRSLQDHMQRHEEPNKYQC 297
C K F K+ L++HM+ H + Y C
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 30.3 bits (68), Expect = 0.039
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 181 EGVKYKCKECGKCYTQNTNLKQHMLSH 207
E C CGK +T L+QH H
Sbjct: 3 EAGILPCGLCGKVFTDANRLRQHEAQH 29
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 28.9 bits (64), Expect = 0.060
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG 209
+KC+ CGKC+++ LK HM H G
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRCHTG 26
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.9 bits (65), Expect = 0.070
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 185 YKCKE--CGKCYTQNTNLKQHMLSH 207
Y C C K + Q+TNLK H+L+H
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILTH 27
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.4 bits (63), Expect = 0.11
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 187 CKECGKCYTQNTNLKQHMLSHKG 209
C ECGK + +++ LK+H L H G
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTG 27
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 27.4 bits (61), Expect = 0.23
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 266 VHECNLCAKLFACKRSLQDHMQRH 289
+ C+ C + F ++L HM H
Sbjct: 5 SYTCSFCKREFRSAQALGGHMNVH 28
Score = 26.2 bits (58), Expect = 0.80
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 291 EPNKYQCAMCKKQYASKKMLEKHIRRH 317
P Y C+ CK+++ S + L H+ H
Sbjct: 2 PPRSYTCSFCKREFRSAQALGGHMNVH 28
Score = 25.1 bits (55), Expect = 1.7
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 184 KYKCKECGKCYTQNTNLKQHMLSHK 208
Y C C + + L HM H+
Sbjct: 5 SYTCSFCKREFRSAQALGGHMNVHR 29
Score = 24.7 bits (54), Expect = 2.6
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 236 SERFKCDLCGKVTPYYQHYLRHMRIH 261
+ C C + Q HM +H
Sbjct: 3 PRSYTCSFCKREFRSAQALGGHMNVH 28
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 27.1 bits (60), Expect = 0.28
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 212 FICFHCNKNFTHRALLVRHMQK 233
+ C CN+ FT R LL+RH QK
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQK 23
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 27.1 bits (60), Expect = 0.30
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 294 KYQCAMCKKQYASKKMLEKHIRRHEGQ 320
KY C C + ML+KHIR H
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTDV 27
>d1k28a3 d.2.1.3 (A:130-345) Tail-associated lysozyme gp5, catalytic
domain {Bacteriophage T4 [TaxId: 10665]}
Length = 216
Score = 29.2 bits (65), Expect = 0.65
Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 9/52 (17%)
Query: 291 EPNKYQCAMCKKQYASKKM---------LEKHIRRHEGQDYKCYICGNRYAT 333
+ + A+ ++ + + +RR EG K Y Y T
Sbjct: 19 QDSNLDTAINPDDRPLSEIPTDDNPNMSMAEMLRRDEGLRLKVYWDTEGYPT 70
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 25.8 bits (56), Expect = 1.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 212 FICFHCNKNFTHRALLVRH 230
F+C C K FT R + RH
Sbjct: 5 FVCSKCGKTFTRRNTMARH 23
>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus
kodakaraensis [TaxId: 311400]}
Length = 218
Score = 28.3 bits (63), Expect = 1.1
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 185 YKCKECGKCYTQNTNLKQHMLSH 207
YKC+ECGK Y NL+ H+ H
Sbjct: 147 YKCEECGK-YVDIENLEAHLREH 168
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 106
Score = 27.1 bits (60), Expect = 1.5
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 88 SPSDPEIMDTKNVLCYICDEILKDIDDLR 116
+ + EI T N L I D++DL
Sbjct: 34 AATREEIDWTTNELRNNLRSIEWDLEDLD 62
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 25.2 bits (55), Expect = 1.6
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 185 YKCK--ECGKCYTQNTNLKQHMLSHKG 209
Y CK C K YT ++L++H+ + G
Sbjct: 3 YVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase
FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 165
Score = 27.4 bits (60), Expect = 1.9
Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 7/98 (7%)
Query: 254 YLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKH 313
+ + + + +F C++S DH+ R E + ++ Y +
Sbjct: 27 FWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTA------- 79
Query: 314 IRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGHTYMC 351
R + K + + + ++ GH Y+C
Sbjct: 80 YSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVC 117
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 24.7 bits (53), Expect = 2.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 296 QCAMCKKQYASKKMLEKHIRRHEGQ 320
+C C K++ SK L+ H R+H G+
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGE 26
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 25.4 bits (56), Expect = 2.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 262 QGLEVHECNLCAKLFACKRSLQDHMQ 287
G +H C CA+ F +L+ H +
Sbjct: 11 PGGGLHRCLACARYFIDSTNLKTHFR 36
Score = 25.4 bits (56), Expect = 2.5
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
Query: 156 RFKCDLCSRTFNSQSYLQQH---KKH 178
+C C+R F + L+ H K H
Sbjct: 15 LHRCLACARYFIDSTNLKTHFRSKDH 40
Score = 23.9 bits (52), Expect = 8.1
Identities = 6/25 (24%), Positives = 8/25 (32%), Gaps = 2/25 (8%)
Query: 212 FICFHCNKNFTHRALLVRHMQ--KH 234
C C + F L H + H
Sbjct: 16 HRCLACARYFIDSTNLKTHFRSKDH 40
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 24.6 bits (53), Expect = 2.5
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 295 YQCAMCKKQYASKKMLEKHIRRHEGQDYK 323
Y C +C ++ K + H+R H+G K
Sbjct: 4 YSCPVCGLRFKRKDRMSYHVRSHDGSVGK 32
Score = 24.2 bits (52), Expect = 3.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 322 YKCYICGNRYATQKYLEEHIRLHQG 346
Y C +CG R+ + + H+R H G
Sbjct: 4 YSCPVCGLRFKRKDRMSYHVRSHDG 28
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin
reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]}
Length = 160
Score = 26.8 bits (58), Expect = 2.7
Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 6/108 (5%)
Query: 247 VTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYAS 306
+ P+ +L + + ++ N A LF + + + E + A +
Sbjct: 20 IAPFRS-FLWK-MFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDF 77
Query: 307 KKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGHTYMCNAK 354
E+ + E K YI L E ++ + YMC K
Sbjct: 78 AVSREQTNEKGE----KMYIQTRMAQYAVELWEMLKKDNTYVYMCGLK 121
>d1zu1a2 g.37.1.4 (A:74-128) dsRNA-binding protein ZFa (ZNF346, JAZ)
{African clawed frog (Xenopus laevis) [TaxId: 8355]}
Length = 55
Score = 24.9 bits (54), Expect = 2.8
Identities = 8/23 (34%), Positives = 12/23 (52%), Gaps = 3/23 (13%)
Query: 159 CDLCSRTFNSQSYLQQH---KKH 178
C +C+ TF+S + H K H
Sbjct: 24 CPVCNMTFSSPVVAESHYIGKTH 46
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 28
Score = 24.2 bits (52), Expect = 3.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 185 YKCKECGKCYTQNTNLKQH 203
++C +CGKCY + NL +H
Sbjct: 2 FECPKCGKCYFRKENLLEH 20
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 24.3 bits (52), Expect = 3.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 187 CKECGKCYTQNTNLKQHMLSHKG 209
C+ CGK + +L +H LSH G
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSG 30
>d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase
8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 348
Score = 27.0 bits (58), Expect = 3.7
Identities = 16/137 (11%), Positives = 39/137 (28%), Gaps = 2/137 (1%)
Query: 127 GTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYK 186
QF+ V L + + T + + C+ + + ++ K D+ ++
Sbjct: 166 QGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNN--RFY 223
Query: 187 CKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGK 246
C C ++ L + + + L + + G
Sbjct: 224 CSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGP 283
Query: 247 VTPYYQHYLRHMRIHQG 263
++ L + H G
Sbjct: 284 KNNLKKYNLFSVSNHYG 300
>d1dxga_ g.41.5.2 (A:) Desulforedoxin {Desulfovibrio gigas [TaxId:
879]}
Length = 36
Score = 24.0 bits (52), Expect = 4.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 318 EGQDYKCYICGN 329
EG YKC +CG
Sbjct: 3 EGDVYKCELCGQ 14
>d1twfi2 g.41.3.1 (I:50-121) RBP9 subunit of RNA polymerase II
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 72
Score = 24.8 bits (54), Expect = 4.7
Identities = 9/43 (20%), Positives = 15/43 (34%)
Query: 155 VRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQN 197
+C C N QQ +K + + C C +T +
Sbjct: 22 SDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSD 64
>d2fzcb2 g.41.7.1 (B:101-153) Aspartate carbamoyltransferase,
Regulatory-chain, C-terminal domain {Escherichia coli
[TaxId: 562]}
Length = 53
Score = 24.3 bits (53), Expect = 4.9
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 175 HKKHDHEGVKYKCKECGKCYTQN 197
+ + KCK C K ++ N
Sbjct: 26 AVRKRANDIALKCKYCEKEFSHN 48
>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon Haloarcula
marismortui [TaxId: 2238]}
Length = 73
Score = 24.6 bits (54), Expect = 5.5
Identities = 10/39 (25%), Positives = 13/39 (33%), Gaps = 9/39 (23%)
Query: 184 KYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFT 222
K+KC CG + GI+ C HC
Sbjct: 27 KHKCPVCGFKKLKRAGT--------GIWM-CGHCGYKIA 56
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 23.5 bits (50), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 295 YQCAMCKKQYASKKMLEKHIRRHE 318
Y+C +C++ + K L +H R H+
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVHK 24
Score = 22.8 bits (48), Expect = 9.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 157 FKCDLCSRTFNSQSYLQQHKK 177
+KC LC R+F +S L +H++
Sbjct: 1 YKCGLCERSFVEKSALSRHQR 21
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 26.3 bits (58), Expect = 5.8
Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 18/80 (22%)
Query: 205 LSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTP-----YYQHYLRHMR 259
+ ++C +C K + H+ + C P Y + +
Sbjct: 25 YGKQPKLWLCEYCLKYMKYEKSYRFHLGQ----------CQWRQPPGKEIYRKSNISVHE 74
Query: 260 IHQGLEVHEC-NLC--AKLF 276
+ C NLC AKLF
Sbjct: 75 VDGKDHKIYCQNLCLLAKLF 94
>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different
fingers {Fruit fly (Drosophila melanogaster) [TaxId:
7227]}
Length = 36
Score = 23.7 bits (51), Expect = 5.8
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 159 CDLCSRTFNSQSYLQQHKKH 178
C C +FN HK+
Sbjct: 11 CSTCDISFNYVKTYLAHKQF 30
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 26.3 bits (58), Expect = 6.2
Identities = 5/29 (17%), Positives = 12/29 (41%)
Query: 205 LSHKGIFFICFHCNKNFTHRALLVRHMQK 233
L+ + +I + F + R+ +K
Sbjct: 28 LTDEDFIYIDDFTLQYFGSKKQYERYRKK 56
>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4
{Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 24.1 bits (52), Expect = 6.4
Identities = 8/25 (32%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 267 HECNLCAKLFACKRSLQDHM--QRH 289
EC LC ++ + S++DH+ ++H
Sbjct: 7 PECTLCGVKYSARLSIRDHIFSKQH 31
>d1pg5b2 g.41.7.1 (B:105-160) Aspartate carbamoyltransferase,
Regulatory-chain, C-terminal domain {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 56
Score = 24.3 bits (53), Expect = 6.4
Identities = 4/23 (17%), Positives = 9/23 (39%)
Query: 145 TRFHLLKHNWVRFKCDLCSRTFN 167
F L ++ +C+ C +
Sbjct: 24 PTFKTLTEKPLKMRCEYCETIID 46
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 24.0 bits (52), Expect = 8.4
Identities = 7/34 (20%), Positives = 11/34 (32%), Gaps = 2/34 (5%)
Query: 185 YKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCN 218
+KC C +T + F C C+
Sbjct: 15 FKCPVCSSTFTDLEAN--QLFDPMTGTFRCTFCH 46
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 23.6 bits (50), Expect = 9.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 263 GLEVHECNLCAKLFACKRSLQDH 285
G++ +ECN+CAK F + S H
Sbjct: 2 GIKPYECNICAKRFMWRDSFHRH 24
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.137 0.439
Gapped
Lambda K H
0.267 0.0564 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,396,238
Number of extensions: 70091
Number of successful extensions: 770
Number of sequences better than 10.0: 1
Number of HSP's gapped: 751
Number of HSP's successfully gapped: 276
Length of query: 360
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 274
Effective length of database: 1,226,816
Effective search space: 336147584
Effective search space used: 336147584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 53 (24.6 bits)