Query psy6528
Match_columns 421
No_of_seqs 501 out of 1926
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 20:23:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6528.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6528hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2olg_A Pro-phenoloxidase activ 100.0 8.2E-54 2.8E-58 405.6 29.5 242 60-303 13-277 (278)
2 4f4o_C Haptoglobin; globin fol 100.0 1.5E-54 5.2E-59 421.5 17.6 247 52-305 81-347 (347)
3 1t8o_A Chymotrypsin A; chymotr 100.0 4.8E-53 1.6E-57 393.0 26.4 229 67-304 13-244 (245)
4 3bg8_A Coagulation factor XIA 100.0 5.1E-53 1.8E-57 391.1 26.0 232 70-304 1-237 (238)
5 2oq5_A Transmembrane protease, 100.0 1.7E-52 6E-57 386.0 29.3 229 70-303 1-231 (232)
6 4dgj_A Enteropeptidase catalyt 100.0 9.6E-53 3.3E-57 388.4 27.6 231 70-303 1-235 (235)
7 1bru_P Elastase, PPE; serine p 100.0 2.2E-52 7.6E-57 387.6 28.4 231 70-304 1-240 (241)
8 1yc0_A Hepatocyte growth facto 100.0 2.3E-52 7.9E-57 396.7 29.1 244 59-305 20-276 (283)
9 2any_A Kininogenin, plasma kal 100.0 2.3E-52 8E-57 387.4 28.4 233 70-305 1-238 (241)
10 1ym0_A Fibrinotic enzyme compo 100.0 1.3E-52 4.6E-57 388.2 26.4 232 70-305 1-238 (238)
11 3ncl_A Suppressor of tumorigen 100.0 2.4E-52 8.3E-57 387.1 28.1 231 70-303 1-240 (241)
12 2f91_A Hepatopancreas trypsin; 100.0 2.2E-52 7.4E-57 386.7 27.6 228 70-302 1-236 (237)
13 1z8g_A Serine protease hepsin; 100.0 2.4E-52 8.2E-57 410.9 28.9 243 60-305 107-362 (372)
14 1pyt_D TC, PCPA-TC, chymotryps 100.0 4.2E-52 1.4E-56 388.1 27.6 232 67-303 11-250 (251)
15 2jde_A Urokinase-type plasmino 100.0 2.9E-52 9.8E-57 394.6 26.6 245 59-305 11-271 (276)
16 2bz6_H Blood coagulation facto 100.0 2.4E-52 8.1E-57 390.4 25.6 235 70-305 1-242 (254)
17 1ddj_A Plasminogen; catalytic 100.0 5.4E-52 1.8E-56 386.4 27.8 229 67-304 15-246 (247)
18 1gvk_B Elastase 1, peptide inh 100.0 6.8E-52 2.3E-56 384.1 28.2 230 70-304 1-239 (240)
19 1mza_A Pro-granzyme K; apoptos 100.0 7.2E-52 2.5E-56 383.9 28.2 231 68-304 1-236 (240)
20 3gov_B MAsp-1; complement, ser 100.0 7.4E-52 2.5E-56 386.0 27.8 232 70-304 1-249 (251)
21 3gyl_B Prostasin; ENAC, zymoge 100.0 4.8E-52 1.7E-56 389.7 26.6 235 70-305 1-244 (261)
22 1fiw_A Beta-acrosin heavy chai 100.0 1.2E-51 4.2E-56 392.7 28.5 235 70-305 1-251 (290)
23 2wph_S Coagulation factor IXA 100.0 3.5E-52 1.2E-56 384.7 23.5 229 70-304 1-234 (235)
24 2bdy_A Thrombin; thrombin, com 100.0 4.9E-52 1.7E-56 395.6 25.1 235 67-304 28-286 (289)
25 2r0l_A Hepatocyte growth facto 100.0 1.9E-51 6.6E-56 382.9 28.4 233 70-305 1-241 (248)
26 2zgc_A Granzyme M; serine prot 100.0 1.4E-51 4.9E-56 381.9 27.1 229 70-306 1-232 (240)
27 1rtf_B (TC)-T-PA, two chain ti 100.0 3.2E-51 1.1E-55 382.3 28.4 232 70-303 1-251 (252)
28 2jkh_A Activated factor XA hea 100.0 9.6E-52 3.3E-56 383.3 24.4 230 70-305 1-235 (241)
29 1aut_C Activated protein C; se 100.0 1.5E-51 5.2E-56 384.0 25.6 230 70-305 1-241 (250)
30 2f9n_A Alpha I tryptase; serin 100.0 2.3E-51 8E-56 381.6 26.7 229 70-304 1-243 (245)
31 2vnt_A Urokinase-type plasmino 100.0 4.2E-51 1.4E-55 386.5 28.5 246 58-305 10-271 (276)
32 1orf_A Granzyme A; hydrolase-h 100.0 2.8E-51 9.5E-56 378.5 26.0 228 70-305 1-233 (234)
33 1fxy_A Coagulation factor XA-t 100.0 1.7E-51 5.7E-56 378.5 24.3 223 70-304 1-226 (228)
34 3mhw_U Urokinase-type plasmino 100.0 3.7E-51 1.3E-55 380.4 26.9 233 70-304 1-247 (247)
35 1hj8_A Trypsin I; hydrolase, r 100.0 2.7E-51 9.4E-56 375.5 25.3 220 70-304 1-221 (222)
36 1m9u_A Earthworm fibrinolytic 100.0 3.6E-51 1.2E-55 379.4 26.1 230 70-302 1-241 (241)
37 2b9l_A Prophenoloxidase activa 100.0 1.7E-51 5.9E-56 406.4 24.7 245 59-305 116-385 (394)
38 1lo6_A Kallikrein 6, HK6; seri 100.0 5.2E-51 1.8E-55 373.9 26.1 220 70-304 1-222 (223)
39 3mfj_A Cationic trypsin; serin 100.0 4.1E-51 1.4E-55 374.6 24.7 220 70-304 1-222 (223)
40 2xw9_A Complement factor D; im 100.0 8E-51 2.7E-55 373.9 26.3 226 70-303 1-228 (228)
41 3tvj_B Mannan-binding lectin s 100.0 4.4E-51 1.5E-55 378.7 24.2 230 70-304 1-241 (242)
42 1eq9_A Chymotrypsin; FIRE ANT, 100.0 6.8E-51 2.3E-55 372.9 25.1 220 70-304 1-222 (222)
43 1iau_A Granzyme B; hydrolase-h 100.0 1E-50 3.4E-55 373.1 26.3 222 70-304 1-226 (227)
44 1md8_A C1R complement serine p 100.0 7.8E-52 2.7E-56 400.7 19.7 244 54-304 70-329 (329)
45 1elt_A Elastase; serine protei 100.0 1.7E-50 6E-55 373.6 27.7 227 70-302 1-236 (236)
46 1zjk_A Mannan-binding lectin s 100.0 7.6E-51 2.6E-55 405.1 26.4 247 53-304 143-402 (403)
47 1pq7_A Trypsin; ultra-high res 100.0 7.6E-51 2.6E-55 373.1 24.2 222 70-302 1-224 (224)
48 2bdg_A Kallikrein-4; serine pr 100.0 1.1E-50 3.7E-55 371.8 25.2 219 70-303 1-222 (223)
49 1ao5_A Glandular kallikrein-13 100.0 7E-51 2.4E-55 376.5 24.0 222 70-305 1-236 (237)
50 1spj_A Kallikrein 1; serine pr 100.0 1.7E-50 5.8E-55 374.1 26.5 222 70-305 1-237 (238)
51 2xxl_A GRAM-positive specific 100.0 4.2E-51 1.4E-55 405.5 23.4 241 60-306 110-376 (408)
52 1euf_A Duodenase; serine prote 100.0 3.8E-50 1.3E-54 369.2 27.5 221 70-304 1-225 (227)
53 2zch_P Prostate-specific antig 100.0 1.2E-50 4.2E-55 374.9 24.1 221 70-304 1-235 (237)
54 2psx_A Kallikrein-5; zinc inhi 100.0 2.3E-50 7.8E-55 370.7 25.6 221 70-305 1-226 (227)
55 2z7f_E Leukocyte elastase; ser 100.0 2.3E-50 8E-55 368.3 24.8 216 70-303 1-218 (218)
56 1si5_H Scatter factor, hepatoc 100.0 6.3E-50 2.2E-54 370.8 27.7 226 70-305 1-229 (240)
57 1npm_A Neuropsin; serine prote 100.0 2.4E-50 8E-55 370.1 24.4 219 70-303 1-225 (225)
58 4i8h_A Cationic trypsin, beta- 100.0 3.2E-50 1.1E-54 368.6 25.0 220 70-304 1-222 (223)
59 1gvz_A Kallikrein-1E2; antigen 100.0 1.1E-50 3.7E-55 375.2 21.5 222 70-305 1-236 (237)
60 1elv_A Complement C1S componen 100.0 1.7E-50 5.8E-55 392.5 23.9 241 53-305 62-327 (333)
61 3h7t_A Group 3 allergen smipp- 100.0 2E-50 6.8E-55 372.6 22.9 227 70-305 1-231 (235)
62 3fzz_A Granzyme C; hydrolase, 100.0 6.6E-50 2.2E-54 367.5 26.1 222 70-304 1-227 (227)
63 2qxi_A Kallikrein-7; S1 pocket 100.0 4.3E-50 1.5E-54 368.1 24.5 220 70-305 1-223 (224)
64 2asu_B Hepatocyte growth facto 100.0 7.2E-50 2.5E-54 369.0 25.9 222 70-305 1-228 (234)
65 1cgh_A Cathepsin G; inflammati 100.0 8E-50 2.7E-54 366.3 26.0 219 70-303 1-223 (224)
66 1sgf_A 7S NGF, nerve growth fa 100.0 6.4E-51 2.2E-55 377.5 18.9 224 68-305 2-239 (240)
67 1a7s_A Heparin binding protein 100.0 8.8E-50 3E-54 366.3 26.1 218 70-305 1-220 (225)
68 4e7n_A Snake-venom thrombin-li 100.0 9.4E-50 3.2E-54 369.0 26.1 225 70-305 1-231 (238)
69 4ag1_A Chymase; hydrolase-de n 100.0 1E-49 3.5E-54 366.0 26.0 220 70-304 1-225 (226)
70 1ton_A Tonin; hydrolase(serine 100.0 5.4E-50 1.8E-54 370.1 24.1 220 70-305 1-234 (235)
71 2qy0_B Complement C1R subcompo 100.0 2E-50 6.8E-55 374.6 20.2 229 70-305 1-241 (242)
72 1fon_A Procarboxypeptidase A-S 100.0 1.9E-50 6.4E-55 374.4 19.8 228 72-304 1-239 (240)
73 3s9c_A Vipera russelli protein 100.0 2.4E-49 8.1E-54 365.4 26.2 222 70-305 1-227 (234)
74 3rm2_H Thrombin heavy chain; s 100.0 8.4E-50 2.9E-54 373.8 23.5 232 70-304 1-256 (259)
75 3rp2_A RAT MAST cell protease 100.0 1.6E-49 5.5E-54 364.1 24.5 219 70-303 1-224 (224)
76 1azz_A Collagenase; complex (s 100.0 8.1E-50 2.8E-54 366.7 22.5 220 70-304 1-224 (226)
77 3s69_A Thrombin-like enzyme de 100.0 2.2E-49 7.4E-54 365.6 25.3 223 70-305 1-227 (234)
78 3nxp_A Prethrombin-1; alloster 100.0 2.7E-50 9.1E-55 402.8 20.6 235 67-304 163-421 (424)
79 1gpz_A Complement C1R componen 100.0 5.8E-50 2E-54 398.3 20.7 244 54-304 138-397 (399)
80 2aiq_A Protein C activator; sn 100.0 3.8E-49 1.3E-53 363.5 23.9 220 70-305 1-224 (231)
81 1fuj_A PR3, myeloblastin; hydr 100.0 8.8E-49 3E-53 358.6 25.8 217 70-303 1-221 (221)
82 2f83_A Coagulation factor XI; 100.0 1.6E-49 5.3E-54 414.6 23.2 241 60-304 379-624 (625)
83 3f1s_B Vitamin K-dependent pro 100.0 3.6E-49 1.2E-53 374.5 20.6 228 58-305 46-278 (283)
84 3h7o_A Group 3 allergen smipp- 100.0 4.1E-49 1.4E-53 362.3 20.1 223 71-304 1-227 (228)
85 3beu_A Trypsin, SGT; beta shee 100.0 9.7E-49 3.3E-53 359.0 22.5 221 70-304 1-223 (224)
86 2hlc_A Collagenase; serine pro 100.0 1.9E-47 6.6E-52 351.8 24.9 220 70-305 1-229 (230)
87 2xrc_A Human complement factor 100.0 1.7E-48 5.8E-53 402.3 17.9 241 60-305 308-558 (565)
88 4dur_A Plasminogen, serine pro 100.0 3.1E-47 1E-51 403.0 26.9 236 60-304 547-790 (791)
89 3h5c_B Vitamin K-dependent pro 100.0 1.4E-46 4.8E-51 362.6 21.5 226 58-303 87-317 (317)
90 1rrk_A Complement factor B; BB 100.0 1.2E-43 4.2E-48 362.6 17.2 235 58-306 208-493 (497)
91 2odp_A Complement C2; C3/C5 co 100.0 7.5E-44 2.6E-48 365.3 14.2 237 59-306 218-504 (509)
92 3hrz_D Complement factor B; se 100.0 6.5E-41 2.2E-45 358.4 18.3 227 70-305 457-734 (741)
93 1p3c_A Glutamyl-endopeptidase; 100.0 3.8E-40 1.3E-44 300.0 4.6 201 66-304 7-215 (215)
94 2pka_B Kallikrein A; serine pr 100.0 2.9E-34 1E-38 246.6 15.0 145 150-304 2-150 (152)
95 1yph_C Chymotrypsin A, chain B 100.0 1.3E-32 4.5E-37 230.3 15.9 128 70-200 1-130 (131)
96 3cp7_A Alkaline serine proteas 100.0 2.3E-31 7.7E-36 242.2 10.8 194 77-302 2-211 (218)
97 1arb_A Achromobacter protease 100.0 7.7E-30 2.6E-34 238.0 11.6 185 85-296 26-235 (268)
98 1wcz_A Glutamyl endopeptidase; 100.0 2.7E-29 9.3E-34 235.6 13.7 193 76-306 12-214 (268)
99 2o8l_A V8 protease, taphylococ 100.0 1.3E-28 4.3E-33 231.8 16.1 193 76-306 12-214 (274)
100 2w7s_A Serine protease SPLA; h 100.0 3.5E-29 1.2E-33 224.9 9.6 187 75-303 7-199 (200)
101 2vid_A Serine protease SPLB; h 99.9 2.7E-28 9.1E-33 219.7 10.2 185 75-303 7-203 (204)
102 1agj_A Epidermolytic toxin A; 99.9 1.2E-27 4.1E-32 221.3 13.9 192 75-298 35-236 (242)
103 2qa9_E Streptogrisin-B; chymot 99.9 6.2E-26 2.1E-30 201.1 7.3 169 92-302 11-184 (185)
104 2as9_A Serine protease; trypsi 99.9 1.8E-24 6E-29 195.7 13.0 186 76-304 9-204 (210)
105 1qtf_A Exfoliative toxin B; se 99.9 1.7E-23 5.9E-28 193.8 13.6 167 76-278 29-206 (246)
106 1yph_E Chymotrypsin A, chain C 99.9 1.6E-23 5.4E-28 165.3 8.4 94 205-304 3-96 (97)
107 2sga_A Proteinase A; hydrolase 99.8 4.2E-21 1.4E-25 169.3 7.8 159 92-299 11-177 (181)
108 2pka_A Kallikrein A; serine pr 99.8 5.7E-20 2E-24 139.5 10.8 78 70-151 1-79 (80)
109 3k6y_A Serine protease, possib 99.7 2E-16 6.9E-21 145.3 16.6 179 80-301 40-224 (237)
110 1l1j_A Heat shock protease HTR 99.7 4.3E-16 1.5E-20 143.0 11.6 173 92-303 55-228 (239)
111 1y8t_A Hypothetical protein RV 99.7 1.7E-15 5.7E-20 145.7 16.3 187 80-303 15-222 (324)
112 3tjo_A Serine protease HTRA1; 99.6 1.1E-15 3.6E-20 139.8 12.1 179 81-303 41-230 (231)
113 3qo6_A Protease DO-like 1, chl 99.6 9.6E-15 3.3E-19 141.7 14.9 173 93-304 53-227 (348)
114 1lcy_A HTRA2 serine protease; 99.5 2.7E-14 9.2E-19 137.2 12.7 165 93-301 47-212 (325)
115 1te0_A Protease DEGS; two doma 99.5 1.3E-13 4.4E-18 132.1 15.7 169 92-303 41-214 (318)
116 3lgi_A Protease DEGS; stress-s 99.5 4E-13 1.4E-17 123.2 17.8 168 93-303 53-225 (237)
117 3num_A Serine protease HTRA1; 99.5 3E-13 1E-17 130.3 16.2 165 93-302 46-212 (332)
118 1hpg_A Glutamic acid specific 99.5 1.7E-13 5.9E-18 120.8 12.4 163 91-298 10-182 (187)
119 2ea3_A Chymotrypsin; celloulom 99.4 1E-13 3.4E-18 122.3 7.2 160 90-299 12-177 (189)
120 3sti_A Protease DEGQ; serine p 99.4 1E-11 3.5E-16 114.0 16.1 169 92-303 62-233 (245)
121 2pfe_A Protease A, alkaline se 99.2 1.6E-11 5.5E-16 107.8 8.3 154 93-296 14-177 (186)
122 3stj_A Protease DEGQ; serine p 99.1 2E-09 6.9E-14 103.8 18.1 168 92-302 62-232 (345)
123 2oua_A Serine protease, protei 99.1 2.2E-10 7.5E-15 100.8 7.8 155 93-295 13-179 (188)
124 3pv2_A DEGQ; trypsin fold, PDZ 98.9 3.2E-08 1.1E-12 98.8 15.2 170 92-302 76-250 (451)
125 4a8c_A Periplasmic PH-dependen 98.8 1.2E-07 4E-12 94.4 18.8 144 92-278 62-207 (436)
126 2h5c_A Alpha-lytic protease; s 98.6 1.7E-07 5.6E-12 83.0 8.8 142 90-277 12-162 (198)
127 1ky9_A Protease DO, DEGP, HTRA 98.5 1.7E-06 5.9E-11 86.2 15.9 144 92-278 85-230 (448)
128 1zyo_A Serine protease; beta-b 98.2 2E-06 6.9E-11 75.0 6.1 168 84-300 18-188 (191)
129 2w5e_A Putative serine proteas 98.1 4.8E-05 1.7E-09 64.8 13.9 81 90-197 18-98 (163)
130 1wxr_A Haemoglobin protease; h 97.9 5.6E-05 1.9E-09 80.5 11.3 173 95-304 58-254 (1048)
131 4fln_A Protease DO-like 2, chl 97.8 0.00028 9.5E-09 71.3 15.2 184 79-303 62-245 (539)
132 1mbm_A NSP4 proteinase, chymot 96.4 0.034 1.2E-06 47.3 11.0 31 85-115 7-38 (198)
133 3syj_A Adhesion and penetratio 95.2 0.1 3.6E-06 54.9 10.9 53 249-305 213-266 (1011)
134 3fan_A Non-structural protein; 94.4 0.12 4.1E-06 44.7 7.7 36 82-117 19-55 (213)
135 3mmg_A Nuclear inclusion prote 90.5 2.2 7.4E-05 37.9 10.5 149 98-293 34-184 (241)
136 1lvm_A Catalytic domain of the 87.4 6 0.0002 34.8 11.1 157 98-301 42-201 (229)
137 3h09_A IGA1 protease, immunogl 80.8 1.2 4E-05 47.1 4.2 53 249-304 258-311 (989)
138 3sze_A Serine protease ESPP; p 78.8 1.4 4.8E-05 46.6 4.0 27 249-275 203-230 (968)
139 4ash_A NS6 protease; hydrolase 63.9 8.9 0.0003 31.1 4.6 30 247-277 134-163 (185)
140 3h8d_A Myosin-VI; myosin VI, m 52.9 4.1 0.00014 32.0 0.9 23 368-390 25-49 (141)
141 2fyq_A Chymotrypsin-like cyste 43.2 28 0.00097 28.3 4.4 30 247-277 145-174 (194)
142 3kl4_B DPAP B, YSCV, signal pe 35.6 16 0.00054 21.5 1.3 15 340-354 20-34 (42)
143 2hrv_A 2A cysteine proteinase; 31.2 51 0.0018 26.4 4.1 37 249-295 101-137 (142)
144 1fiw_L Beta-acrosin light chai 28.8 29 0.00098 18.9 1.5 19 55-73 3-26 (26)
145 3su6_A NS3 protease, NS4A prot 25.7 22 0.00076 29.7 1.1 22 249-274 155-176 (203)
146 1z8r_A Coxsackievirus B4 polyp 25.4 50 0.0017 27.1 3.1 56 228-299 105-160 (166)
147 2yew_A Capsid protein, coat pr 22.3 29 0.001 29.9 1.2 27 250-280 201-227 (253)
148 4agk_A Capsid protein, coat pr 22.2 26 0.00088 27.6 0.8 26 250-279 105-130 (158)
No 1
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=100.00 E-value=8.2e-54 Score=405.62 Aligned_cols=242 Identities=36% Similarity=0.741 Sum_probs=201.5
Q ss_pred CCCCCCCCCccccCeeCCCCCCceEEEEeecC-----eeEEEEEEEeCCEEEEccccccCc----ceeeEEEEEeeeecc
Q psy6528 60 SCGETNDATRIVGGQPTEVNQYPWMVRLSYFN-----RFYCGGTLINDRYVLTAAHCVKGR----LWFLIKATFGEYDRC 130 (421)
Q Consensus 60 ~cg~~~~~~rI~gG~~a~~~~~Pw~v~l~~~~-----~~~CgGtLIs~~~VLTAAhC~~~~----~~~~~~v~~G~~~~~ 130 (421)
.||......||+||++|.+++|||+|+|.+.. .++|+||||+++||||||||+.+. ......|++|.++..
T Consensus 13 ~CG~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~ 92 (278)
T 2olg_A 13 DCGYQVEADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGEWNTA 92 (278)
T ss_dssp SCSCCCCCCCSCCSSBCCTTSSTTEEEEEEECTTCCEEEEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESCSBTT
T ss_pred HhCCCCCCCceECCEECCCCCCCceEEEEEecCCCCcceeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCcccCC
Confidence 67876667899999999999999999997642 589999999999999999999653 134578999998765
Q ss_pred CCCC-----------CCceeEEEE-EEcCCCCCCCC--CCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEec
Q psy6528 131 DTSS-----------KPESRFVIR-AIVGDFTFSNF--DNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGW 196 (421)
Q Consensus 131 ~~~~-----------~~~~~~v~~-~i~p~y~~~~~--~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~Gw 196 (421)
...+ ..+...+.+ ++||+|+.... .||||||||++|+.|+++|+|||||........+..|+++||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GW 172 (278)
T 2olg_A 93 TDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGW 172 (278)
T ss_dssp CSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEES
T ss_pred CCccccccccccCCCCceEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcC
Confidence 4322 223344444 45699987664 799999999999999999999999986445567899999999
Q ss_pred ccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC
Q psy6528 197 GTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG 276 (421)
Q Consensus 197 G~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g 276 (421)
|.+..+ ..+..|+++.+++++.++|+..+......++++||||+... ++++|+|||||||++...+++|+|+||+|||
T Consensus 173 G~t~~~-~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~~~-~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g 250 (278)
T 2olg_A 173 GRTETG-QYSTIKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEK-AKDSCGGDSGGPLLAERANQQFFLEGLVSFG 250 (278)
T ss_dssp CCSSSC-CCCSBCEEEEEEBCCGGGGGGGGSSTTCCCCTTEEEECCTT-CTTCCCCCTTCEEEEEEGGGEEEEEEEEEEC
T ss_pred CcCCCC-CccchhhcccccccCHHHHHHHhccccccCCCceEeeecCC-CCeeCCCccCcceEEEcCCCcEEEEEEEEEC
Confidence 998654 45778999999999999998654433345889999998654 4899999999999998557899999999999
Q ss_pred CCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 277 AGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 277 ~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
.+|+..+.|+|||||+.|.+||+++++
T Consensus 251 ~~C~~~~~p~vyt~V~~y~~WI~~~i~ 277 (278)
T 2olg_A 251 ATCGTEGWPGIYTKVGKYRDWIEGNIR 277 (278)
T ss_dssp CBCSTTCBCEEEEEGGGGHHHHHTTCC
T ss_pred CCCCCCCCCcEEeEHHHHHHHHHHhhC
Confidence 999988899999999999999999875
No 2
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=100.00 E-value=1.5e-54 Score=421.53 Aligned_cols=247 Identities=25% Similarity=0.482 Sum_probs=194.6
Q ss_pred CCCCCccCCCCCCC----CCCccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeee
Q psy6528 52 EDYPMCDCSCGETN----DATRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEY 127 (421)
Q Consensus 52 ~~~~~~~~~cg~~~----~~~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~ 127 (421)
+..+.|.+.||++. ...||+||++|.+++|||||+|...+.++||||||+++||||||||+.........+..+..
T Consensus 81 ~~lp~C~p~CG~p~~~~~~~~RIvGG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~ 160 (347)
T 4f4o_C 81 EKLPECEAVCGKPKNPVDQVQRIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLRLGHKNDTKAKDIAP 160 (347)
T ss_dssp TCCCEEEECCSCCSSCC-----CCSCCBCCSCCCTTCEEEECTTCCEEECCBCSSSEEEECHHHHTTTSCTTCCHHHHGG
T ss_pred ccCCCccCCCCCCCCCCCCCCeEECCEECCCCCCCcEEEEEeCCCEEEEEEEEcCCEEEeCcccccCCCCCcceEEeeee
Confidence 34578999999864 24799999999999999999999888999999999999999999999643322222222222
Q ss_pred eccCCCCCCceeEEEEE-EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCc
Q psy6528 128 DRCDTSSKPESRFVIRA-IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPA 206 (421)
Q Consensus 128 ~~~~~~~~~~~~~v~~~-i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~ 206 (421)
.........+...+.++ +||+|+ .||||||||++|+.|+++|+|||||.. .....+..++++|||.+.. +..+
T Consensus 161 ~~~~~~~~~~~~~V~~i~~HP~y~----~nDIALlkL~~~v~~~~~v~PicLp~~-~~~~~g~~~~v~GWG~~~~-~~~s 234 (347)
T 4f4o_C 161 TLRLYVGKKQEVEIEKVIFHPDNS----TVDIGLIKLKQKVPVNERVMPICLPSK-DYVNVGLVGYVSGWGRNAN-LNFT 234 (347)
T ss_dssp GCEEEETTTEEECEEEEEECSCTT----TCCCEEEEESSCCCCSSSCCCCBCCSS-CCCCTTCEEEEEECSBCTT-SSBC
T ss_pred eeeecCCCeEEEEEEEEEECcCCC----CCCEEEEEECCCccCCCceeeeecCcc-ccCCCCcEEEEeccccCCC-CCCC
Confidence 21111123344445554 568885 589999999999999999999999975 4456789999999998754 3457
Q ss_pred cceeEEEeeeechhhhccccCC--------------CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEe-cCCceEEEE
Q psy6528 207 CIIRDVEVPILSNQYCRTSTNY--------------SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFER-EDSRYEQIG 271 (421)
Q Consensus 207 ~~L~~~~~~v~~~~~C~~~~~~--------------~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~-~~~~~~lvG 271 (421)
..|+++.++++++++|++.+.. ....++++||||+..++++++|+|||||||++.+ .+++|+|+|
T Consensus 235 ~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvG 314 (347)
T 4f4o_C 235 EHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAG 314 (347)
T ss_dssp SSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEE
T ss_pred ccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEE
Confidence 7899999999999999754321 1234788999999888889999999999999975 478999999
Q ss_pred EEEeCCCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 272 IVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 272 I~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
|+|||.+|+. +.|+|||||++|++||+++|.++
T Consensus 315 IvS~G~~C~~-~~pgVYTrVs~y~~WI~~~i~~N 347 (347)
T 4f4o_C 315 ILSFDKSCRT-AEYGVYVRVTSILDWIQTTIADN 347 (347)
T ss_dssp EEEECCCTTT-SSCEEEEEHHHHHHHHHHHHTC-
T ss_pred EEEeCCCCCC-CCCeEEEEHHHHHHHHHHHHHcC
Confidence 9999999975 56999999999999999999864
No 3
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=100.00 E-value=4.8e-53 Score=393.00 Aligned_cols=229 Identities=33% Similarity=0.642 Sum_probs=192.9
Q ss_pred CCccccCeeCCCCCCceEEEEee-cCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-
Q psy6528 67 ATRIVGGQPTEVNQYPWMVRLSY-FNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA- 144 (421)
Q Consensus 67 ~~rI~gG~~a~~~~~Pw~v~l~~-~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~- 144 (421)
..||+||++|.+++|||+|+|.. .+.++|+||||+++||||||||+.+ ....|++|.++........+...+.++
T Consensus 13 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~---~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 89 (245)
T 1t8o_A 13 LSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT---TSDVVVAGEFDQGSSSEKIQKLKIAKVF 89 (245)
T ss_dssp ---CBTCEECCTTSSTTEEEEECTTCCEEEEEEEEETTEEEECGGGCCC---TTSEEEESCSBTTCSSSCCEEEEEEEEE
T ss_pred CCceECCEECCCCCCCceEEEEcCCCCeEEEEEEeeCCEEEEcHHhCcC---CCcEEEEeeeecCCCCCCcEEEEEEEEE
Confidence 35999999999999999999987 4568999999999999999999865 234788998877654444455555554
Q ss_pred EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCC-CccceeEEEeeeechhhhc
Q psy6528 145 IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGR-PACIIRDVEVPILSNQYCR 223 (421)
Q Consensus 145 i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~~v~~~~~C~ 223 (421)
+||+|+.....||||||||++|+.|+++++|||||........+..++++|||.+...+. .+..|+++.+++++.++|+
T Consensus 90 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~ 169 (245)
T 1t8o_A 90 KNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCK 169 (245)
T ss_dssp ECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHH
T ss_pred eCCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhh
Confidence 469999988999999999999999999999999998644455789999999998876543 5778999999999999998
Q ss_pred cccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 224 TSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 224 ~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
+.+. ..+++.||||+ .++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||+++++
T Consensus 170 ~~~~---~~~~~~~~Ca~--~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 170 KYWG---TKIKDAMICAG--ASGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp HHHG---GGCCTTEEEEE--CSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHHH
T ss_pred Hhhc---CcCCCceEEcc--CCCCccCcccCcCCEEEEE-CCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 5432 35789999998 3457899999999999987 7899999999999999988899999999999999999986
Q ss_pred c
Q psy6528 304 E 304 (421)
Q Consensus 304 ~ 304 (421)
.
T Consensus 244 ~ 244 (245)
T 1t8o_A 244 A 244 (245)
T ss_dssp T
T ss_pred c
Confidence 5
No 4
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=100.00 E-value=5.1e-53 Score=391.11 Aligned_cols=232 Identities=33% Similarity=0.673 Sum_probs=198.8
Q ss_pred cccCeeCCCCCCceEEEEee---cCeeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCCCCCCceeEEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSY---FNRFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDTSSKPESRFVIRA- 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~---~~~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~~~~~~~~~v~~~- 144 (421)
|+||++|.+++|||+|+|.. .+.++|+||||+++||||||||+.+. ....+.|.+|.++........+...+.++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 80 (238)
T 3bg8_A 1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEII 80 (238)
T ss_dssp CBSCEECCTTSSTTEEEEEECSSSCEEEEEEEEEETTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEE
T ss_pred CCCCeECCCCCcCcEEEEEeecCCCcEEEEEEEeeCCEEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEE
Confidence 78999999999999999987 35689999999999999999999653 33567899998877654444455555554
Q ss_pred EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcc
Q psy6528 145 IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 145 i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
+||+|+.....||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|+.
T Consensus 81 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 160 (238)
T 3bg8_A 81 IHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQK 160 (238)
T ss_dssp ECTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHH
T ss_pred ECCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhh
Confidence 56999988889999999999999999999999999854445668899999999987766667889999999999999985
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
.+. ...+++.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||+++++.
T Consensus 161 ~~~--~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 237 (238)
T 3bg8_A 161 RYR--GHKITHKMICAGYREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQA 237 (238)
T ss_dssp HCT--TSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHSC
T ss_pred hhc--CCCCCCCeEeecCCCCCCCcCCCCCCcceEEEE-CCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHHHhc
Confidence 432 234789999998766678999999999999987 78999999999999999888999999999999999998864
No 5
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=100.00 E-value=1.7e-52 Score=386.04 Aligned_cols=229 Identities=34% Similarity=0.640 Sum_probs=196.4
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCCCCCCceeEEEEE-EcC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDTSSKPESRFVIRA-IVG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p 147 (421)
|+||++|.+++|||+|+|.+.+.++|+||||+++||||||||+... ....+.|.+|.... ...+...+.++ +||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~~v~~G~~~~----~~~~~~~v~~i~~hp 76 (232)
T 2oq5_A 1 IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIK----PSKMKRGLRRIIVHE 76 (232)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCCCGGGEEEEESSBST----TCSEEEEEEEEEECT
T ss_pred CCCCEECCCCCCCeeEEEEeCCCeeEEEEEEcCCEEEECHHHcCCCCCCceEEEEEeeEEC----CCceEEeEEEEEeCC
Confidence 7899999999999999999988899999999999999999999753 34567888887642 12334445554 569
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccC
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
+|+.....||||||||++|+.|+++++|||||........+..++++|||.+...+..+..|+++.+++++.++|+....
T Consensus 77 ~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 156 (232)
T 2oq5_A 77 KYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQA 156 (232)
T ss_dssp TCCTTCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTT
T ss_pred CCCCCCCCCCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccc
Confidence 99998899999999999999999999999999864445568999999999987766677889999999999999985433
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
+ ...+++.||||+..++..++|+|||||||++.+.+++|+|+||+|||.+|+..+.|++||||+.|++||+++++
T Consensus 157 ~-~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 231 (232)
T 2oq5_A 157 Y-NDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSKTG 231 (232)
T ss_dssp T-TTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHHHHC
T ss_pred c-CCccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHHhC
Confidence 2 34578999999976666899999999999998667899999999999999988899999999999999999874
No 6
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=100.00 E-value=9.6e-53 Score=388.39 Aligned_cols=231 Identities=36% Similarity=0.688 Sum_probs=199.7
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCc--ceeeEEEEEeeeeccCCCCC-CceeEEEEE-E
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGR--LWFLIKATFGEYDRCDTSSK-PESRFVIRA-I 145 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~--~~~~~~v~~G~~~~~~~~~~-~~~~~v~~~-i 145 (421)
|+||++|.+++|||+|+|...+.++|+||||+++||||||||+.+. ....+.+.+|.+........ .....+.++ +
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~ 80 (235)
T 4dgj_A 1 IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVI 80 (235)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEE
T ss_pred CCCCccCCCCCCCcEEEEeeCCCeEEEEEEeeCCEEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEE
Confidence 7899999999999999999988999999999999999999999542 34567899998765543332 233445554 5
Q ss_pred cCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccc
Q psy6528 146 VGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 146 ~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
||+|+.....||||||+|++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|+..
T Consensus 81 hp~y~~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 160 (235)
T 4dgj_A 81 NPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQ 160 (235)
T ss_dssp CTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHH
T ss_pred CCCCCCCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhh
Confidence 69999999999999999999999999999999998655556789999999999887777788999999999999999854
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
+. ...++++||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++||+++++
T Consensus 161 ~~--~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~i~ 235 (235)
T 4dgj_A 161 MP--EYNITENMICAGYEEGGIDSCQGDSGGPLMCQE-NNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSFLH 235 (235)
T ss_dssp CT--TSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHTTCC
T ss_pred cc--CccCCCCeEeecCCCCCCccCCCCCCCeEEEEE-CCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHHHhC
Confidence 32 245789999999777778999999999999987 7899999999999999988899999999999999999874
No 7
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=100.00 E-value=2.2e-52 Score=387.57 Aligned_cols=231 Identities=32% Similarity=0.648 Sum_probs=196.2
Q ss_pred cccCeeCCCCCCceEEEEeec--C--eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF--N--RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA- 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~--~--~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~- 144 (421)
|+||++|.+++|||+|+|.+. + .++|+||||+++||||||||+.. ...+.|++|.++........+...+.++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 78 (241)
T 1bru_P 1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS--SRTYRVVLGRHSLSTNEPGSLAVKVSKLV 78 (241)
T ss_dssp CBSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT--TSCEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred CCCCeECCCCCcCcEEEEEEecCCceeeEEEeEEeeCCEEEEcHHhccc--CCceEEEEEcccccCCCCccEEEEEEEEE
Confidence 789999999999999999863 3 48999999999999999999973 2567899999877655444455556555
Q ss_pred EcCCCCCCCCC--CceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhh
Q psy6528 145 IVGDFTFSNFD--NDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYC 222 (421)
Q Consensus 145 i~p~y~~~~~~--~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C 222 (421)
+||+|+..... ||||||||++|+.|+++|+|||||........+..|+++|||.+...+..+..|+++.+++++.++|
T Consensus 79 ~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C 158 (241)
T 1bru_P 79 VHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATC 158 (241)
T ss_dssp ECTTCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHH
T ss_pred ECCCCCCCCCCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHh
Confidence 56999987777 9999999999999999999999998644455688999999999877666678899999999999999
Q ss_pred ccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC--CCCCCCCCeEEEEeceehhhhhh
Q psy6528 223 RTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA--GCGRAGYPGVYTRITRYVEWIKE 300 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~--~c~~~~~p~vyt~V~~y~~WI~~ 300 (421)
++...+ ...+++.||||+. .+..++|+|||||||++...+++|+|+||+|||. +|+..+.|++||||+.|++||++
T Consensus 159 ~~~~~~-~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 236 (241)
T 1bru_P 159 SKPGWW-GSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINS 236 (241)
T ss_dssp TSTTTT-GGGCCTTEEEECC-SSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHH
T ss_pred Cccccc-CCcCCCceEeecC-CCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHH
Confidence 854222 3457899999984 4567999999999999986578999999999997 79887899999999999999999
Q ss_pred hccc
Q psy6528 301 KSKE 304 (421)
Q Consensus 301 ~~~~ 304 (421)
++++
T Consensus 237 ~i~~ 240 (241)
T 1bru_P 237 VIAN 240 (241)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9875
No 8
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=100.00 E-value=2.3e-52 Score=396.65 Aligned_cols=244 Identities=30% Similarity=0.638 Sum_probs=201.9
Q ss_pred CCCCCCCC-----CCccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcc-eeeEEEEEeeeeccCC
Q psy6528 59 CSCGETND-----ATRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRL-WFLIKATFGEYDRCDT 132 (421)
Q Consensus 59 ~~cg~~~~-----~~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~-~~~~~v~~G~~~~~~~ 132 (421)
..||.+.. ..||+||++|.+++|||+|+|+.. .++|+||||+++||||||||+.+.. ...+.|++|.++....
T Consensus 20 ~~CG~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~-~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~ 98 (283)
T 1yc0_A 20 QACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYIG-DSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRT 98 (283)
T ss_dssp -CCSCCSCC-------CBSCEECCTTSSTTEEEEEET-TEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCC
T ss_pred CCcCCcccccccCcCceECCeECCCCCCCeEEEEEcC-CcEEEEEEeeCCEEEECHHHcCCCCCCceEEEEEeeeecccC
Confidence 35776543 259999999999999999999865 6899999999999999999996542 4568899999887655
Q ss_pred CCCCceeEEEEEE-cCCCCC-CCCCCceEEEEECCC----cccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCC-C
Q psy6528 133 SSKPESRFVIRAI-VGDFTF-SNFDNDIALLRLNDR----VPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGR-P 205 (421)
Q Consensus 133 ~~~~~~~~v~~~i-~p~y~~-~~~~~DIALlkL~~p----v~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~ 205 (421)
....+...+.+++ ||.|+. ....||||||+|++| +.|+++|+|||||........+..|+++|||.+...+. .
T Consensus 99 ~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~ 178 (283)
T 1yc0_A 99 TDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGY 178 (283)
T ss_dssp CSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSC
T ss_pred CCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCcc
Confidence 4445555566554 699987 778899999999999 89999999999998645556789999999998876543 4
Q ss_pred ccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCC
Q psy6528 206 ACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYP 285 (421)
Q Consensus 206 ~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p 285 (421)
+..|+++.+++++.++|+.... +...+++.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|
T Consensus 179 ~~~L~~~~v~i~~~~~C~~~~~-~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GIvS~g~~C~~~~~p 256 (283)
T 1yc0_A 179 SSSLREALVPLVADHKCSSPEV-YGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGIISWGDGCGRLHKP 256 (283)
T ss_dssp CSBCEEEEEEBCCHHHHTSTTT-TGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSTTTCTTCC
T ss_pred CchheEeEEEEECHHHhcCccc-cCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEE-CCcEEEEEEEEECCCCCCCCCC
Confidence 7789999999999999985322 2345789999999766668999999999999987 7899999999999999988899
Q ss_pred eEEEEeceehhhhhhhcccc
Q psy6528 286 GVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 286 ~vyt~V~~y~~WI~~~~~~~ 305 (421)
++||||+.|.+||++++++.
T Consensus 257 ~vyt~V~~y~~WI~~~i~~~ 276 (283)
T 1yc0_A 257 GVYTRVANYVDWINDRIRPP 276 (283)
T ss_dssp EEEEEGGGGHHHHHHHCC--
T ss_pred eEEEEhhhHHHHHHHHhcCC
Confidence 99999999999999999864
No 9
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=100.00 E-value=2.3e-52 Score=387.40 Aligned_cols=233 Identities=35% Similarity=0.715 Sum_probs=198.9
Q ss_pred cccCeeCCCCCCceEEEEee---cCeeEEEEEEEeCCEEEEccccccCcc-eeeEEEEEeeeeccCCCCCCceeEEEE-E
Q psy6528 70 IVGGQPTEVNQYPWMVRLSY---FNRFYCGGTLINDRYVLTAAHCVKGRL-WFLIKATFGEYDRCDTSSKPESRFVIR-A 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~---~~~~~CgGtLIs~~~VLTAAhC~~~~~-~~~~~v~~G~~~~~~~~~~~~~~~v~~-~ 144 (421)
|+||++|.+++|||+|+|.. .+.++|+||||+++||||||||+.+.. ...+.|++|..+........+...+.+ +
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 80 (241)
T 2any_A 1 IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEII 80 (241)
T ss_dssp CBSCEECCTTSSTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEE
T ss_pred CCCCEECCCCCCCcEEEEEEEcCCCceEEEEEEecCCEEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEE
Confidence 78999999999999999987 346899999999999999999996532 345788999887765444444444555 4
Q ss_pred EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcc
Q psy6528 145 IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 145 i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
+||+|+.....||||||+|++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|+.
T Consensus 81 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 160 (241)
T 2any_A 81 IHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQK 160 (241)
T ss_dssp ECTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHT
T ss_pred ECCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhh
Confidence 56999988889999999999999999999999999865555678999999999987766667889999999999999985
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
.+. ...+++.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||++++++
T Consensus 161 ~~~--~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~~ 237 (241)
T 2any_A 161 RYQ--DYKITQRMVCAGYKEGGKDACKGDSGGPLVCKH-NGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQS 237 (241)
T ss_dssp TSC--TTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHSC
T ss_pred Hhc--cCCCCcCcEeecCCCCCCccCCCCCCCcEEEEE-CCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHhhc
Confidence 432 234789999998766678999999999999987 78999999999999999888999999999999999999875
Q ss_pred c
Q psy6528 305 G 305 (421)
Q Consensus 305 ~ 305 (421)
.
T Consensus 238 ~ 238 (241)
T 2any_A 238 S 238 (241)
T ss_dssp C
T ss_pred c
Confidence 3
No 10
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=100.00 E-value=1.3e-52 Score=388.23 Aligned_cols=232 Identities=34% Similarity=0.705 Sum_probs=199.4
Q ss_pred cccCeeCCCCCCceEEEEeecC--eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-Ec
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFN--RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IV 146 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~--~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~ 146 (421)
|+||+++.+++|||+|+|...+ .++|+||||+++||||||||+.+.....+.|++|.++........+...+.++ +|
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h 80 (238)
T 1ym0_A 1 IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVN 80 (238)
T ss_dssp CBSCEECCTTSSTTEEEEEEGGGTEEEEEEEEEETTEEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEEC
T ss_pred CCCCEECCCCccCCEEEEEeCCCCceEEEEEEeeCCEEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEEC
Confidence 7899999999999999998765 78999999999999999999977656678999999887665544555556655 46
Q ss_pred CCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCC-ccceeEEEeeeechhhhccc
Q psy6528 147 GDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRP-ACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 147 p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~-~~~L~~~~~~v~~~~~C~~~ 225 (421)
|+|+.....||||||||++|+.|+++++|||||.... ...+..++++|||.+...+.. +..|+++.+++++.++|+..
T Consensus 81 p~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~-~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~ 159 (238)
T 1ym0_A 81 ENYDPATLENDVSVIKTAVAITFDINVGPICAPDPAN-DYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAV 159 (238)
T ss_dssp TTCCTTTCTTCCEEEEESSCCCCSSSCCCCBCCCTTC-CCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHH
T ss_pred CCCCCCCCcccEEEEEeCCCccccCcccccCCCCCcC-CCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHh
Confidence 9999988999999999999999999999999998533 237889999999998766554 77899999999999999854
Q ss_pred cCCCCCCCCCCeEEeccCCCC--CCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGM--KDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~--~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
+. ...+.+.||||+...+. .++|+|||||||++..++++|+|+||+|||.+|+ .+.|++||||+.|.+||+++++
T Consensus 160 ~~--~~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~-~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 160 YT--SDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCA-SGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp CT--TSCCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSS-SSSCEEEEEHHHHHHHHHHHHH
T ss_pred hc--ccccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCC-CCCCcEEEEHHHhHHHHHHHhc
Confidence 32 23578999999876554 7899999999999987678999999999999998 6789999999999999999987
Q ss_pred cc
Q psy6528 304 EG 305 (421)
Q Consensus 304 ~~ 305 (421)
++
T Consensus 237 ~n 238 (238)
T 1ym0_A 237 NN 238 (238)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 11
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=100.00 E-value=2.4e-52 Score=387.08 Aligned_cols=231 Identities=34% Similarity=0.622 Sum_probs=199.5
Q ss_pred cccCeeCCCCCCceEEEEeecC-eeEEEEEEEeCCEEEEccccccCc------ceeeEEEEEeeeeccCCCC-CCceeEE
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFN-RFYCGGTLINDRYVLTAAHCVKGR------LWFLIKATFGEYDRCDTSS-KPESRFV 141 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~-~~~CgGtLIs~~~VLTAAhC~~~~------~~~~~~v~~G~~~~~~~~~-~~~~~~v 141 (421)
|+||++|.+++|||+|+|...+ .++|+||||+++||||||||+.+. ....+.|.+|.++...... ..+...+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v 80 (241)
T 3ncl_A 1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRL 80 (241)
T ss_dssp CBSCEECCTTSSTTEEEEEETTTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEE
T ss_pred CCCCeECCCCCCCcEEEEEcCCCceEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEE
Confidence 7899999999999999998754 589999999999999999999653 3456789999887655432 3344555
Q ss_pred EEE-EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechh
Q psy6528 142 IRA-IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQ 220 (421)
Q Consensus 142 ~~~-i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~ 220 (421)
.++ +||.|+..+..||||||||++|+.|+++++|||||........+..|+++|||.+..++..+..|+++.+++++.+
T Consensus 81 ~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~ 160 (241)
T 3ncl_A 81 KRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQT 160 (241)
T ss_dssp EEEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHH
T ss_pred EEEEECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHH
Confidence 554 4699999889999999999999999999999999986555567999999999998877777788999999999999
Q ss_pred hhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhh
Q psy6528 221 YCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKE 300 (421)
Q Consensus 221 ~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~ 300 (421)
+|+..+ ...+++.|+||+...++.++|+|||||||++...+++|+|+||+|||.+|+..+.|++||+|+.|++||++
T Consensus 161 ~C~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~ 237 (241)
T 3ncl_A 161 TCENLL---PQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKE 237 (241)
T ss_dssp HHHHHS---TTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHH
T ss_pred Hhhhhc---ccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 998543 24588999999977777899999999999988768899999999999999988899999999999999999
Q ss_pred hcc
Q psy6528 301 KSK 303 (421)
Q Consensus 301 ~~~ 303 (421)
+++
T Consensus 238 ~~~ 240 (241)
T 3ncl_A 238 NTG 240 (241)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
No 12
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=100.00 E-value=2.2e-52 Score=386.66 Aligned_cols=228 Identities=37% Similarity=0.720 Sum_probs=194.9
Q ss_pred cccCeeCCCCCCceEEEEeec--Ce--eEEEEEEEeCCEEEEccccccCc---ceeeEEEEEeeeeccCCCCCCceeEEE
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF--NR--FYCGGTLINDRYVLTAAHCVKGR---LWFLIKATFGEYDRCDTSSKPESRFVI 142 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~--~~--~~CgGtLIs~~~VLTAAhC~~~~---~~~~~~v~~G~~~~~~~~~~~~~~~v~ 142 (421)
|+||++|.+++|||+|+|... +. .+|+||||+++||||||||+.+. ....+.|++|.++........+...+.
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~ 80 (237)
T 2f91_A 1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVS 80 (237)
T ss_dssp CBSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEE
T ss_pred CCCccCCCCCCCCcEEEEEEecCCCCcceEEEEEeeCCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEE
Confidence 789999999999999999764 22 44999999999999999999654 456688999998776444444555565
Q ss_pred EE-EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhh
Q psy6528 143 RA-IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQY 221 (421)
Q Consensus 143 ~~-i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~ 221 (421)
++ +||+|+.....||||||||++|+.|+++++|||||... ...+..++++|||.+...+..+..|+++.+++++.++
T Consensus 81 ~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~--~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~ 158 (237)
T 2f91_A 81 KIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQG--HTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDED 158 (237)
T ss_dssp EEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTT--CCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHH
T ss_pred EEEECCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCCC--CCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHH
Confidence 55 46999988899999999999999999999999999742 3568899999999987776677889999999999999
Q ss_pred hccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhh
Q psy6528 222 CRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEK 301 (421)
Q Consensus 222 C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~ 301 (421)
|+..+. ...+.+.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|++||+++
T Consensus 159 C~~~~~--~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (237)
T 2f91_A 159 CRADYG--ADEILDSMICAGVPEGGKDSCQGDSGGPLAASD-TGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKAN 235 (237)
T ss_dssp HHHHHC--TTTSCTTEEEECCTTCCCBCCTTCTTCEEEECT-TSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHH
T ss_pred hhhhhC--CCCcCCCeEEEecCCCCCCCCCCcCCCCeEEec-CCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHHh
Confidence 985433 234788999998766678999999999999975 78999999999999999888999999999999999987
Q ss_pred c
Q psy6528 302 S 302 (421)
Q Consensus 302 ~ 302 (421)
+
T Consensus 236 ~ 236 (237)
T 2f91_A 236 A 236 (237)
T ss_dssp C
T ss_pred c
Confidence 6
No 13
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=100.00 E-value=2.4e-52 Score=410.88 Aligned_cols=243 Identities=38% Similarity=0.746 Sum_probs=202.6
Q ss_pred CCCCC-CCCCccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccC--cceeeEEEEEeeeeccCCCCCC
Q psy6528 60 SCGET-NDATRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKG--RLWFLIKATFGEYDRCDTSSKP 136 (421)
Q Consensus 60 ~cg~~-~~~~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~--~~~~~~~v~~G~~~~~~~~~~~ 136 (421)
.||.+ ....||+||.+|.+++|||+|+|.+.+.++|+||||+++||||||||+.. .....+.|++|.++.... ..
T Consensus 107 ~Cg~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~--~~ 184 (372)
T 1z8g_A 107 DCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASP--HG 184 (372)
T ss_dssp CCSCCCCC---CBSCEECCTTSSTTEEEEEETTEEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTCT--TS
T ss_pred ccCCcCCCCCceECCEECCCCCCCcEEEEEeCCceEEEEEEecCCEEEEChhhcCCCCCccceEEEEEeeEeccCC--CC
Confidence 57875 34679999999999999999999988899999999999999999999943 234567899998765432 22
Q ss_pred ceeEEEEE-EcCCC------CCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccce
Q psy6528 137 ESRFVIRA-IVGDF------TFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACII 209 (421)
Q Consensus 137 ~~~~v~~~-i~p~y------~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L 209 (421)
....+.++ +||+| +.....||||||||++|+.|+++|+|||||........+..|+++|||.+...+..+..|
T Consensus 185 ~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L 264 (372)
T 1z8g_A 185 LQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVL 264 (372)
T ss_dssp EEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBC
T ss_pred cEEEEEEEEECCCccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCcee
Confidence 23445554 56999 667788999999999999999999999999864455668999999999988766778899
Q ss_pred eEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEec---CCceEEEEEEEeCCCCCCCCCCe
Q psy6528 210 RDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFERE---DSRYEQIGIVSWGAGCGRAGYPG 286 (421)
Q Consensus 210 ~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~---~~~~~lvGI~S~g~~c~~~~~p~ 286 (421)
+++.+++++.++|+... .+...++++||||+...++.++|+|||||||++..+ +++|+|+||+|||.+|+..+.|+
T Consensus 265 ~~~~v~ii~~~~C~~~~-~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~ 343 (372)
T 1z8g_A 265 QEARVPIISNDVCNGAD-FYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPG 343 (372)
T ss_dssp EEEEEEEECHHHHTSTT-TTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCE
T ss_pred eEEEEEecChHHhCcch-hcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCe
Confidence 99999999999998532 233468899999997777789999999999999863 38999999999999999888999
Q ss_pred EEEEeceehhhhhhhcccc
Q psy6528 287 VYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 287 vyt~V~~y~~WI~~~~~~~ 305 (421)
|||||+.|++||+++++..
T Consensus 344 vyt~V~~y~~WI~~~i~~~ 362 (372)
T 1z8g_A 344 VYTKVSDFREWIFQAIKTH 362 (372)
T ss_dssp EEEEGGGGHHHHHHHHHHT
T ss_pred EEEEHHHHHHHHHHHHhcc
Confidence 9999999999999998753
No 14
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=100.00 E-value=4.2e-52 Score=388.07 Aligned_cols=232 Identities=32% Similarity=0.599 Sum_probs=195.4
Q ss_pred CCccccCeeCCCCCCceEEEEeec----CeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCC-CCceeEE
Q psy6528 67 ATRIVGGQPTEVNQYPWMVRLSYF----NRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSS-KPESRFV 141 (421)
Q Consensus 67 ~~rI~gG~~a~~~~~Pw~v~l~~~----~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~-~~~~~~v 141 (421)
..||+||++|.+++|||+|+|.+. ..++|+||||+++||||||||+.+ ...+.|++|.++...... ..+...+
T Consensus 11 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~~~~~~~~~~v 88 (251)
T 1pyt_D 11 SARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISN--TLTYRVALGKNNLEVEDEAGSLYVGV 88 (251)
T ss_dssp SSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT--TCCEEEEESCSBTTCSCCSSCEEEEE
T ss_pred CCccCCCEECCCCCCCceEEEEEEcCCCcceEEEeEEecCCEEEECHHHhCC--CceEEEEEcccccccCCCCCcEEEEE
Confidence 469999999999999999999752 358999999999999999999964 345789999987653322 2333445
Q ss_pred EEE-EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechh
Q psy6528 142 IRA-IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQ 220 (421)
Q Consensus 142 ~~~-i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~ 220 (421)
.++ +||+|+.....||||||||++|+.|+++|+|||||........+..|+++|||.+...+..+..|+++.+++++.+
T Consensus 89 ~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~ 168 (251)
T 1pyt_D 89 DTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYA 168 (251)
T ss_dssp EEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHH
T ss_pred EEEEECCCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHH
Confidence 554 5699998888999999999999999999999999986444556889999999998776666778999999999999
Q ss_pred hhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC--CCCCCCCCeEEEEeceehhhh
Q psy6528 221 YCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA--GCGRAGYPGVYTRITRYVEWI 298 (421)
Q Consensus 221 ~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~--~c~~~~~p~vyt~V~~y~~WI 298 (421)
+|+..+. ....+++.||||+. .+..++|+|||||||++.. +++|+|+||+|||. .|+..+.|++||||+.|.+||
T Consensus 169 ~C~~~~~-~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI 245 (251)
T 1pyt_D 169 TCSQRDW-WGTTVKETMVCAGG-DGVISACNGDSGGPLNCQA-DGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWI 245 (251)
T ss_dssp HHTSTTT-TTTTCCTTEEEECC-SCSSCCCCSCTTCEEEEES-SSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHH
T ss_pred Hcchhhc-cCCCcCCCeEEecC-CCCCccCCCCCCCceEEEE-CCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHH
Confidence 9985432 23457899999985 4557999999999999986 78999999999996 798878899999999999999
Q ss_pred hhhcc
Q psy6528 299 KEKSK 303 (421)
Q Consensus 299 ~~~~~ 303 (421)
+++++
T Consensus 246 ~~~~~ 250 (251)
T 1pyt_D 246 NQKLQ 250 (251)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99875
No 15
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=100.00 E-value=2.9e-52 Score=394.59 Aligned_cols=245 Identities=29% Similarity=0.584 Sum_probs=197.9
Q ss_pred CCCCCCC--CCCccccCeeCCCCCCceEEEEeecC-----eeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeecc
Q psy6528 59 CSCGETN--DATRIVGGQPTEVNQYPWMVRLSYFN-----RFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRC 130 (421)
Q Consensus 59 ~~cg~~~--~~~rI~gG~~a~~~~~Pw~v~l~~~~-----~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~ 130 (421)
..||... ...||+||+++.+++|||+|+|+... .++|+||||+++||||||||+.+. ....+.|++|.++..
T Consensus 11 ~~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~ 90 (276)
T 2jde_A 11 FQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLN 90 (276)
T ss_dssp -------------CBSSEECCGGGSTTEEEEEEECCCCCEEEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSS
T ss_pred CCCCCCCCCCCCCeECCEECCCCCCCeEEEEEEecCCCccceeeeeEEeeCCEEEEcHHhccCCCCcccEEEEecccccC
Confidence 4567643 45799999999999999999997642 479999999999999999999653 345678999998876
Q ss_pred CCCCCCceeEEEEE-EcCCCCCCC--CCCceEEEEECCC----cccCCCccccccCCCCCCCCCCCcEEEEecccCCCCC
Q psy6528 131 DTSSKPESRFVIRA-IVGDFTFSN--FDNDIALLRLNDR----VPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG 203 (421)
Q Consensus 131 ~~~~~~~~~~v~~~-i~p~y~~~~--~~~DIALlkL~~p----v~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~ 203 (421)
......+...+.++ +||+|+..+ ..||||||+|++| +.|+++++|||||........+..|+++|||.+...+
T Consensus 91 ~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~ 170 (276)
T 2jde_A 91 SNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTD 170 (276)
T ss_dssp SCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTTSCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTC
T ss_pred CCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCccccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCC
Confidence 65555555556555 469998776 6799999999999 8899999999999864555668999999999987655
Q ss_pred C-CccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCC
Q psy6528 204 R-PACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRA 282 (421)
Q Consensus 204 ~-~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~ 282 (421)
. .+..|+++.+++++.++|+... .....+++.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus 171 ~~~~~~l~~~~~~~~~~~~C~~~~-~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~ 248 (276)
T 2jde_A 171 YLYPEQLKMTVVKLISHRECQQPH-YYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALK 248 (276)
T ss_dssp SCCCSBCEEEEEEEECHHHHTSTT-TTGGGSCTTEEEEECTTSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCT
T ss_pred cccchhhhhceecccChHHhCccc-ccCccCCCCeEEecCCCCCCcccccccCcceEEEe-CCcEEEEEEEEECCCCCCC
Confidence 3 5778999999999999998543 23356889999999877778999999999999987 7899999999999999988
Q ss_pred CCCeEEEEeceehhhhhhhcccc
Q psy6528 283 GYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 283 ~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
+.|++||+|+.|.+||++++++.
T Consensus 249 ~~p~vyt~V~~y~~WI~~~~~~~ 271 (276)
T 2jde_A 249 DKPGVYTRVSHFLPWIRSHTKEE 271 (276)
T ss_dssp TCCEEEEEGGGGHHHHHHTC---
T ss_pred CCCeEEEEHHHHHHHHHHHhhhh
Confidence 89999999999999999999854
No 16
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=100.00 E-value=2.4e-52 Score=390.40 Aligned_cols=235 Identities=38% Similarity=0.679 Sum_probs=200.5
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcc-eeeEEEEEeeeeccCCCCCCceeEEEEE-EcC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRL-WFLIKATFGEYDRCDTSSKPESRFVIRA-IVG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~-~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p 147 (421)
|+||++|.+++|||+|+|..++.++|+||||+++||||||||+.+.. ...+.|++|.++........+...+.++ +||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp 80 (254)
T 2bz6_H 1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPS 80 (254)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEET
T ss_pred CCCCEECCCCCcCCEEEEEeCCCcEEEEEEecCCEEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECC
Confidence 78999999999999999998888999999999999999999997543 3568899999887655444555556555 469
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCC---CCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcc
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLN---NTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~---~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
+|+.....||||||||++|+.|+++|+|||||.... ....+..++++|||.+...+..+..|+++.+++++.++|..
T Consensus 81 ~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 160 (254)
T 2bz6_H 81 TYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQ 160 (254)
T ss_dssp TCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHH
T ss_pred CCCCCCCcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhh
Confidence 999988999999999999999999999999997421 13457899999999987766677889999999999999985
Q ss_pred ccCCC--CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhc
Q psy6528 225 STNYS--STRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKS 302 (421)
Q Consensus 225 ~~~~~--~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~ 302 (421)
.+... ...+++.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||++++
T Consensus 161 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 239 (254)
T 2bz6_H 161 QSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHY-RGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLM 239 (254)
T ss_dssp HSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred hhhccccCCccCCCEEeecCCCCCCccccccCCCceEEeE-CCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 43321 235789999999766668999999999999986 789999999999999998889999999999999999999
Q ss_pred ccc
Q psy6528 303 KEG 305 (421)
Q Consensus 303 ~~~ 305 (421)
+..
T Consensus 240 ~~~ 242 (254)
T 2bz6_H 240 RSE 242 (254)
T ss_dssp TSC
T ss_pred hcc
Confidence 854
No 17
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=100.00 E-value=5.4e-52 Score=386.40 Aligned_cols=229 Identities=33% Similarity=0.667 Sum_probs=191.0
Q ss_pred CCccccCeeCCCCCCceEEEEeec-CeeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCCCCCCceeEEEEE
Q psy6528 67 ATRIVGGQPTEVNQYPWMVRLSYF-NRFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDTSSKPESRFVIRA 144 (421)
Q Consensus 67 ~~rI~gG~~a~~~~~Pw~v~l~~~-~~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~~~~~~~~~v~~~ 144 (421)
..||+||++|.+++|||+|+|... +.++|+||||+++||||||||+.+. ....+.|++|.++........+...+.++
T Consensus 15 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~ 94 (247)
T 1ddj_A 15 PGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRL 94 (247)
T ss_dssp CTTCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEE
T ss_pred CCCcCCCEECCCCCCCcEEEEEcCCCCeEEEEEEeeCCEEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeE
Confidence 359999999999999999999864 5689999999999999999999653 33567899998876544333444445554
Q ss_pred E-cCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhc
Q psy6528 145 I-VGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCR 223 (421)
Q Consensus 145 i-~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~ 223 (421)
+ ||. .||||||||++|+.|+++++|||||........+..++++|||.+... ..+..|+++.+++++.++|+
T Consensus 95 ~~hp~------~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~-~~~~~L~~~~~~i~~~~~C~ 167 (247)
T 1ddj_A 95 FLEPT------RKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGT-FGAGLLKEAQLPVIENKVCN 167 (247)
T ss_dssp EECTT------SCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSS-TTTTBCEEEEEEEECHHHHT
T ss_pred EcCCC------CCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCC-CCCccceEEeeeecCHHHhc
Confidence 4 353 589999999999999999999999986444566889999999987643 34678999999999999998
Q ss_pred cccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 224 TSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 224 ~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
+. .+....+++.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||+++|+
T Consensus 168 ~~-~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 245 (247)
T 1ddj_A 168 RY-EFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFE-KDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 245 (247)
T ss_dssp ST-TTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEC-SSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred ch-hccCCCCcCCeEeecCCCCCCccccCcCcCcEEEEE-CCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHhh
Confidence 43 222345789999998766678999999999999986 6899999999999999988899999999999999999987
Q ss_pred c
Q psy6528 304 E 304 (421)
Q Consensus 304 ~ 304 (421)
+
T Consensus 246 ~ 246 (247)
T 1ddj_A 246 N 246 (247)
T ss_dssp T
T ss_pred c
Confidence 5
No 18
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=100.00 E-value=6.8e-52 Score=384.08 Aligned_cols=230 Identities=29% Similarity=0.579 Sum_probs=195.8
Q ss_pred cccCeeCCCCCCceEEEEeec-C---eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF-N---RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA- 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~-~---~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~- 144 (421)
|+||++|.+++|||+|+|... + .++|+||||+++||||||||+... ..+.|++|.++........+...+.++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 78 (240)
T 1gvk_B 1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRE--LTFRVVVGEHNLNQNNGTEQYVGVQKIV 78 (240)
T ss_dssp CBTCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCSC--CCEEEEESCSBTTSCCSCCEEEEEEEEE
T ss_pred CCCCeECCCCCcCEEEEEEecCCCccCceEEEEEeeCCEEEECHHHCCCC--cceEEEECCeecccCCCcceEEEEEEEE
Confidence 789999999999999999863 3 589999999999999999999653 457899999887655444455556555
Q ss_pred EcCCCCCCCC--CCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhh
Q psy6528 145 IVGDFTFSNF--DNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYC 222 (421)
Q Consensus 145 i~p~y~~~~~--~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C 222 (421)
+||+|+.... .||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.+.|
T Consensus 79 ~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C 158 (240)
T 1gvk_B 79 VHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAIC 158 (240)
T ss_dssp ECTTCCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHH
T ss_pred ECCCCCCCCCCCCCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHh
Confidence 4699998877 89999999999999999999999998644455789999999999877666778899999999999999
Q ss_pred ccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC--CCCCCCCCeEEEEeceehhhhhh
Q psy6528 223 RTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA--GCGRAGYPGVYTRITRYVEWIKE 300 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~--~c~~~~~p~vyt~V~~y~~WI~~ 300 (421)
+....+ ...+++.||||+. .+..++|+|||||||++.. +++|+|+||+|||. +|+..+.|++||||+.|.+||++
T Consensus 159 ~~~~~~-~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 235 (240)
T 1gvk_B 159 SSSSYW-GSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINN 235 (240)
T ss_dssp TSTTTT-GGGCCTTEEEECC-SSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHH
T ss_pred cccccc-CccCCcceEeecC-CCCCcccCCCCcCceEEEE-CCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHH
Confidence 854222 3357899999984 4568999999999999987 78999999999995 79887899999999999999999
Q ss_pred hccc
Q psy6528 301 KSKE 304 (421)
Q Consensus 301 ~~~~ 304 (421)
++++
T Consensus 236 ~i~~ 239 (240)
T 1gvk_B 236 VIAS 239 (240)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9864
No 19
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=100.00 E-value=7.2e-52 Score=383.88 Aligned_cols=231 Identities=30% Similarity=0.547 Sum_probs=195.9
Q ss_pred CccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccC-cceeeEEEEEeeeeccCCCCCCceeEEEEE-E
Q psy6528 68 TRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKG-RLWFLIKATFGEYDRCDTSSKPESRFVIRA-I 145 (421)
Q Consensus 68 ~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~-~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i 145 (421)
.||+||++|.+++|||+|+|...+.++|+||||+++||||||||+.+ .....+.|++|.++........+...+.++ +
T Consensus 1 ~rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 80 (240)
T 1mza_A 1 MEIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIP 80 (240)
T ss_dssp CCCCCCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEE
T ss_pred CceECCEECCCCCCCeEEEEeeCCceEEEEEEecCCEEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEe
Confidence 38999999999999999999988889999999999999999999864 234567899999887655444455555555 4
Q ss_pred cCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCC-CccceeEEEeeeechhhhcc
Q psy6528 146 VGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGR-PACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 146 ~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~~v~~~~~C~~ 224 (421)
||+|+.....||||||||++|+.|+++++|||||.. .....+..|+++|||.+...+. .+..|+++.+++++.++|+.
T Consensus 81 hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~ 159 (240)
T 1mza_A 81 FSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSK-TSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNS 159 (240)
T ss_dssp CCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSS-CCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTS
T ss_pred CCCccCCCCCceEEEEEeCCCcccCCceeeeecCCc-ccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCC
Confidence 599998888999999999999999999999999974 3456789999999999876654 57789999999999999983
Q ss_pred ccCCCC-CCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEece-ehhhhhhhc
Q psy6528 225 STNYSS-TRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITR-YVEWIKEKS 302 (421)
Q Consensus 225 ~~~~~~-~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~-y~~WI~~~~ 302 (421)
...+.. ..+++.||||+...++.++|+|||||||+++. +|+||+|||.+|+..+.|++||+|+. |.+||++++
T Consensus 160 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~~~-----~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~~ 234 (240)
T 1mza_A 160 QSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICKG-----VFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNL 234 (240)
T ss_dssp TTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEETT-----EEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHHT
T ss_pred cceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEECC-----EEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHhc
Confidence 222221 25789999999766678999999999999943 79999999999998889999999999 999999998
Q ss_pred cc
Q psy6528 303 KE 304 (421)
Q Consensus 303 ~~ 304 (421)
+.
T Consensus 235 ~~ 236 (240)
T 1mza_A 235 VP 236 (240)
T ss_dssp CC
T ss_pred cC
Confidence 74
No 20
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=100.00 E-value=7.4e-52 Score=385.97 Aligned_cols=232 Identities=31% Similarity=0.600 Sum_probs=199.4
Q ss_pred cccCeeCCCCCCceEEEEee-cCeeEEEEEEEeCCEEEEccccccC--------------cceeeEEEEEeeeeccCCCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSY-FNRFYCGGTLINDRYVLTAAHCVKG--------------RLWFLIKATFGEYDRCDTSS 134 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~-~~~~~CgGtLIs~~~VLTAAhC~~~--------------~~~~~~~v~~G~~~~~~~~~ 134 (421)
|+||++|.+++|||+|+|.. .+.++|+||||+++||||||||+.+ .....+.|++|.++......
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~ 80 (251)
T 3gov_B 1 IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDE 80 (251)
T ss_dssp CBTCEECCTTSCTTEEEEEETTCCEEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCS
T ss_pred CCCCEECCCCCcCeEEEEeccCCCeeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCC
Confidence 78999999999999999987 5678999999999999999999965 34457889999987755544
Q ss_pred CCceeEEEEE-EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEE
Q psy6528 135 KPESRFVIRA-IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVE 213 (421)
Q Consensus 135 ~~~~~~v~~~-i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~ 213 (421)
..+...+.++ +||+|+.....||||||+|++|+.|+++++|||||.. ....+..|+++|||.+..+ ..+..|+++.
T Consensus 81 ~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~--~~~~~~~~~v~GwG~~~~~-~~~~~L~~~~ 157 (251)
T 3gov_B 81 NEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEG--PQQEGAMVIVSGWGKQFLQ-RFPETLMEIE 157 (251)
T ss_dssp SCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSS--CCCTTCEEEEEECSCCTTS-CCCSBCEEEE
T ss_pred cceEeeeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCC--CCCCCCEEEEEcCCCCCCC-CCCccceEEe
Confidence 4555555554 5699999999999999999999999999999999984 3367899999999987654 4577899999
Q ss_pred eeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEe-cCCceEEEEEEEeCCCCCCCCCCeEEEEec
Q psy6528 214 VPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFER-EDSRYEQIGIVSWGAGCGRAGYPGVYTRIT 292 (421)
Q Consensus 214 ~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~-~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~ 292 (421)
+++++.++|+..+......++++||||+...++.++|+|||||||++.+ .+++|+|+||+|||.+|+..+.|++||+|+
T Consensus 158 ~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~ 237 (251)
T 3gov_B 158 IPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIH 237 (251)
T ss_dssp EEEECHHHHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETT
T ss_pred eEEECHHHhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHH
Confidence 9999999998654433456889999999777778999999999999984 478999999999999999888999999999
Q ss_pred eehhhhhhhccc
Q psy6528 293 RYVEWIKEKSKE 304 (421)
Q Consensus 293 ~y~~WI~~~~~~ 304 (421)
.|.+||+++++.
T Consensus 238 ~~~~WI~~~~~~ 249 (251)
T 3gov_B 238 HNKDWIQRVTGV 249 (251)
T ss_dssp TTHHHHHHHHCC
T ss_pred HhHHHHHHHhcc
Confidence 999999999863
No 21
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=100.00 E-value=4.8e-52 Score=389.68 Aligned_cols=235 Identities=32% Similarity=0.616 Sum_probs=202.4
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccC-cceeeEEEEEeeeeccCCCCCCceeEEEEE-EcC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKG-RLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~-~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p 147 (421)
|+||++|.+++|||+|+|...+.++|+||||+++||||||||+.+ .....+.|++|.++........+...+.++ +||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp 80 (261)
T 3gyl_B 1 ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHP 80 (261)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECT
T ss_pred CCCCcCCCCCCCCcEEEEeeCCceEEEEEEEcCCEEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECC
Confidence 789999999999999999998899999999999999999999953 344568899999887665555555555554 469
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCC--CccceeEEEeeeechhhhccc
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGR--PACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~--~~~~L~~~~~~v~~~~~C~~~ 225 (421)
+|+.....||||||||++|+.|+++++|||||........+..|+++|||.+..... .+..|+++.+++++.+.|+..
T Consensus 81 ~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~ 160 (261)
T 3gyl_B 81 SYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSL 160 (261)
T ss_dssp TCCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHH
T ss_pred CcCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhh
Confidence 999989999999999999999999999999998655556789999999998876543 367899999999999999864
Q ss_pred cCC-----CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhh
Q psy6528 226 TNY-----SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKE 300 (421)
Q Consensus 226 ~~~-----~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~ 300 (421)
+.. ....++++||||+...++.+.|+|||||||++.. +++|+|+||+|||.+|+..+.|++||+|+.|++||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI~~ 239 (261)
T 3gyl_B 161 YNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPV-EGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQS 239 (261)
T ss_dssp HTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEE-TTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHHHH
T ss_pred hcccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEe-CCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHHHH
Confidence 331 1245789999999767778999999999999987 7899999999999999988899999999999999999
Q ss_pred hcccc
Q psy6528 301 KSKEG 305 (421)
Q Consensus 301 ~~~~~ 305 (421)
++++.
T Consensus 240 ~i~~~ 244 (261)
T 3gyl_B 240 KVTEL 244 (261)
T ss_dssp HHHHH
T ss_pred HHhhc
Confidence 99764
No 22
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=100.00 E-value=1.2e-51 Score=392.74 Aligned_cols=235 Identities=37% Similarity=0.702 Sum_probs=195.3
Q ss_pred cccCeeCCCCCCceEEEEeec----C--eeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCCCC-----CCc
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF----N--RFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDTSS-----KPE 137 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~----~--~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~~~-----~~~ 137 (421)
|+||++|.+++|||||+|.+. + .++|+||||+++||||||||+... ....+.|++|..+...... ..+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~ 80 (290)
T 1fiw_A 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQ 80 (290)
T ss_dssp CBSCEECCTTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCE
T ss_pred CCCCEECCCCCCCcEEEEEEeccCCCccceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCce
Confidence 799999999999999999762 2 589999999999999999999653 3356789999887643221 234
Q ss_pred eeEEEEE-EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCC-CCCCCcEEEEecccCCCCCC-CccceeEEEe
Q psy6528 138 SRFVIRA-IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNN-TYEDETGVVMGWGTLEESGR-PACIIRDVEV 214 (421)
Q Consensus 138 ~~~v~~~-i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~-~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~ 214 (421)
.+.+.++ +||+|+.....||||||||++|+.|+++|+|||||..... ...+..|+++|||.+...+. .+..|+++.+
T Consensus 81 ~~~V~~i~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v 160 (290)
T 1fiw_A 81 ERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARV 160 (290)
T ss_dssp EEEEEEEEECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEE
T ss_pred EEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEE
Confidence 4445554 5699999889999999999999999999999999975332 23488999999999876543 4668999999
Q ss_pred eeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEec-CCceEEEEEEEeCCCCCCCCCCeEEEEece
Q psy6528 215 PILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFERE-DSRYEQIGIVSWGAGCGRAGYPGVYTRITR 293 (421)
Q Consensus 215 ~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~-~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~ 293 (421)
++++.++|+.... ....+.+.||||+...++.++|+|||||||++... +++|+|+||+|||.+|+..+.|+|||||++
T Consensus 161 ~i~~~~~C~~~~~-~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~ 239 (290)
T 1fiw_A 161 DLIDLGLCNSTRW-YNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWS 239 (290)
T ss_dssp EEECHHHHTSTTT-TTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGG
T ss_pred EEecHHHhccccc-cCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHH
Confidence 9999999985322 23457899999997777789999999999999863 689999999999999998889999999999
Q ss_pred ehhhhhhhcccc
Q psy6528 294 YVEWIKEKSKEG 305 (421)
Q Consensus 294 y~~WI~~~~~~~ 305 (421)
|++||+++++..
T Consensus 240 y~~WI~~~~~~~ 251 (290)
T 1fiw_A 240 YLNWIASKIGST 251 (290)
T ss_dssp GHHHHHHHHCHH
T ss_pred hHHHHHHHhCcc
Confidence 999999999864
No 23
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=100.00 E-value=3.5e-52 Score=384.73 Aligned_cols=229 Identities=38% Similarity=0.745 Sum_probs=196.0
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|...+.++|+||||+++||||||||+... ..+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 78 (235)
T 2wph_S 1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETG--VKITVVAGEHNIEETEHTEQKRNVIRIIPHHN 78 (235)
T ss_dssp CBSCEECCTTSSTTEEEEESSSTTCEEEEEEETTEEEECGGGCCTT--SCCEEEESCCBTTSCCSCCEEEEEEEEEECTT
T ss_pred CCCCEECCCCCCCeEEEEccCCCeeEEEEEEeCCEEEECHHHCcCC--CCEEEEEcccccCCCCCCcEEeeeEEEEeCCC
Confidence 7899999999999999998777889999999999999999999653 356899999887655444555556555 4699
Q ss_pred CCC--CCCCCceEEEEECCCcccCCCccccccCCCCCC--CCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcc
Q psy6528 149 FTF--SNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNN--TYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 149 y~~--~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~--~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
|+. ....||||||||++|+.|+++++|||||..... ...+..++++|||.+...+..+..|+++.+++++.++|+.
T Consensus 79 y~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 158 (235)
T 2wph_S 79 FNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLR 158 (235)
T ss_dssp TTSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHH
T ss_pred CcccCCcCCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcC
Confidence 987 678899999999999999999999999974211 2347889999999987766677889999999999999985
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
.+. ..++++||||+..+++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||+++++.
T Consensus 159 ~~~---~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 234 (235)
T 2wph_S 159 STK---FTITNNMFCAGFHEGGRDSCQGDSGGPHVTEV-EGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKL 234 (235)
T ss_dssp TCS---SCCCTTEEEESCTTCSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHCCC
T ss_pred ccc---CCCCCCEEEeCCCCCCCccCCCCCCCceEEeE-CCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHhc
Confidence 432 35789999998766678999999999999986 78899999999999999888999999999999999999874
No 24
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=100.00 E-value=4.9e-52 Score=395.56 Aligned_cols=235 Identities=38% Similarity=0.712 Sum_probs=190.4
Q ss_pred CCccccCeeCCCCCCceEEEEeec--CeeEEEEEEEeCCEEEEccccccC------cceeeEEEEEeeeeccCCCCC-Cc
Q psy6528 67 ATRIVGGQPTEVNQYPWMVRLSYF--NRFYCGGTLINDRYVLTAAHCVKG------RLWFLIKATFGEYDRCDTSSK-PE 137 (421)
Q Consensus 67 ~~rI~gG~~a~~~~~Pw~v~l~~~--~~~~CgGtLIs~~~VLTAAhC~~~------~~~~~~~v~~G~~~~~~~~~~-~~ 137 (421)
..||+||++|.+++|||+|+|+.. +.++|+||||+++||||||||+.. .....+.|++|.++....... .+
T Consensus 28 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~ 107 (289)
T 2bdy_A 28 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEK 107 (289)
T ss_dssp ---CBSCEECCTTSCTTEEEEEETTTTEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCE
T ss_pred CCeEECCEECCCCCCCCeEEEEECCCCCEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcce
Confidence 579999999999999999999764 468999999999999999999953 233567899999876543322 33
Q ss_pred eeEEEEE-EcCCCCC-CCCCCceEEEEECCCcccCCCccccccCCCCCC---CCCCCcEEEEecccCCCCC-----C-Cc
Q psy6528 138 SRFVIRA-IVGDFTF-SNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNN---TYEDETGVVMGWGTLEESG-----R-PA 206 (421)
Q Consensus 138 ~~~v~~~-i~p~y~~-~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~---~~~~~~~~v~GwG~~~~~~-----~-~~ 206 (421)
...+.++ +||+|+. ....||||||||++|+.|+++|+|||||..... ...+..|+++|||.+.... . .+
T Consensus 108 ~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~ 187 (289)
T 2bdy_A 108 ISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQP 187 (289)
T ss_dssp EEEEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCC
T ss_pred eeeeEEEEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCcccccc
Confidence 3445554 5699985 567899999999999999999999999974221 3468899999999876542 1 26
Q ss_pred cceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCC---CCCCCCcCCCCCeeEEEec-CCceEEEEEEEeCCCCCCC
Q psy6528 207 CIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPE---GMKDSCQGDSGGPMVFERE-DSRYEQIGIVSWGAGCGRA 282 (421)
Q Consensus 207 ~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~---~~~~~C~GDsGgPL~~~~~-~~~~~lvGI~S~g~~c~~~ 282 (421)
..|+++.+++++.+.|+..+ ...++++||||+... .+.++|+|||||||++... +++|+|+||+|||.+|+..
T Consensus 188 ~~L~~~~v~i~~~~~C~~~~---~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~ 264 (289)
T 2bdy_A 188 SVLQVVNLPIVERPVCKDST---RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD 264 (289)
T ss_dssp SBCEEEEEEBCCHHHHHHTC---SSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCT
T ss_pred ccceEEEEEEECHHHhhccc---cCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCC
Confidence 78999999999999998543 245789999998643 3578999999999999852 6899999999999999988
Q ss_pred CCCeEEEEeceehhhhhhhccc
Q psy6528 283 GYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 283 ~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+.|+|||||+.|++||++++++
T Consensus 265 ~~p~vyt~V~~y~~WI~~~i~~ 286 (289)
T 2bdy_A 265 GKYGFYTHVFRLKKWIQKVIDQ 286 (289)
T ss_dssp TCCEEEEETGGGHHHHHHHHHC
T ss_pred CCCEEEEEHHHHHHHHHHHHHh
Confidence 8999999999999999999875
No 25
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=100.00 E-value=1.9e-51 Score=382.87 Aligned_cols=233 Identities=30% Similarity=0.635 Sum_probs=197.4
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcc-eeeEEEEEeeeeccCCCCCCceeEEEEEE-cC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRL-WFLIKATFGEYDRCDTSSKPESRFVIRAI-VG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~-~~~~~v~~G~~~~~~~~~~~~~~~v~~~i-~p 147 (421)
|+||++|.+++|||+|+|+.. .++|+||||+++||||||||+.+.. ...+.|++|.++........+...+.+++ ||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~-~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp 79 (248)
T 2r0l_A 1 IIGGSSSLPGSHPWLAAIYIG-DSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYT 79 (248)
T ss_dssp CBSCEECCTTSSTTEEEEEET-TEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECT
T ss_pred CCCCccCCCCCCCeEEEEEcC-CceEEEEEEcCCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCC
Confidence 789999999999999999865 6899999999999999999996542 45688999998876554445555566554 69
Q ss_pred CCCC-CCCCCceEEEEECCC----cccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCC-CccceeEEEeeeechhh
Q psy6528 148 DFTF-SNFDNDIALLRLNDR----VPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGR-PACIIRDVEVPILSNQY 221 (421)
Q Consensus 148 ~y~~-~~~~~DIALlkL~~p----v~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~~v~~~~~ 221 (421)
.|+. ....||||||||++| +.|+++|+|||||........+..|+++|||.+..... .+..|+++.+++++.++
T Consensus 80 ~y~~~~~~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~ 159 (248)
T 2r0l_A 80 LYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHK 159 (248)
T ss_dssp TCCTTSTTTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHH
T ss_pred ccCcCCCCCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHH
Confidence 9987 778899999999999 89999999999998645556789999999998876543 47789999999999999
Q ss_pred hccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhh
Q psy6528 222 CRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEK 301 (421)
Q Consensus 222 C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~ 301 (421)
|+.... +...+++.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||+++
T Consensus 160 C~~~~~-~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 237 (248)
T 2r0l_A 160 CSSPEV-YGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDR 237 (248)
T ss_dssp HTSTTT-TGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred hCCccc-cCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEE-CCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 985322 2345789999998766668999999999999987 78999999999999999888999999999999999999
Q ss_pred cccc
Q psy6528 302 SKEG 305 (421)
Q Consensus 302 ~~~~ 305 (421)
++..
T Consensus 238 ~~~~ 241 (248)
T 2r0l_A 238 IRPP 241 (248)
T ss_dssp HC--
T ss_pred hcCC
Confidence 9864
No 26
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=100.00 E-value=1.4e-51 Score=381.85 Aligned_cols=229 Identities=27% Similarity=0.522 Sum_probs=194.0
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|..++.++|+||||+++||||||||+.+... .+.|++|..+.... .+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~-~~~v~~G~~~~~~~---~~~~~v~~i~~Hp~ 76 (240)
T 2zgc_A 1 IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRMA-QLRLVLGLHTLDSP---GLTFHIKAAIQHPR 76 (240)
T ss_dssp CBTCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGCSCGG-GEEEEESCSBSSSC---CEEEEEEEEEECTT
T ss_pred CCCCEECCCCCcCcEEEEEeCCCeEEEEEEEcCCEEEEcHHhcCCCCC-CEEEEecccccCCC---CeEEEEEEEEECCC
Confidence 789999999999999999988889999999999999999999976433 67899998776442 244445554 5699
Q ss_pred CCCCC-CCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccC
Q psy6528 149 FTFSN-FDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 149 y~~~~-~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
|+... ..||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|+....
T Consensus 77 y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 156 (240)
T 2zgc_A 77 YKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRF 156 (240)
T ss_dssp CBCTTSCBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTT
T ss_pred CCCCCCCcccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccc
Confidence 99876 88999999999999999999999999864445678999999999987766778899999999999999985212
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceehhhhhhhcccce
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYVEWIKEKSKEGC 306 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~~WI~~~~~~~~ 306 (421)
+ ...+.++||||+...++.++|+|||||||++.+ .|+|+||+||| ..|+..+.|++||||+.|++||+++++...
T Consensus 157 ~-~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~---~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~~~ 232 (240)
T 2zgc_A 157 W-NGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGK---GRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRSA 232 (240)
T ss_dssp T-TTCCCTTEEEEECSSTTCBCCTTCTTCEEEETT---TTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCCC-
T ss_pred c-CCCCCCceEeeccCCCCCccCCCCccCeeEECC---CCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhhcc
Confidence 2 245788999998766668999999999999953 37999999999 689888889999999999999999998653
No 27
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=100.00 E-value=3.2e-51 Score=382.26 Aligned_cols=232 Identities=32% Similarity=0.630 Sum_probs=195.1
Q ss_pred cccCeeCCCCCCceEEEEeec------CeeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCCCCCCceeEEE
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF------NRFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDTSSKPESRFVI 142 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~------~~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~~~~~~~~~v~ 142 (421)
|+||.+|.+++|||+|+|... ..++|+||||+++||||||||+.+. ....+.|++|..+........+...+.
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~ 80 (252)
T 1rtf_B 1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVE 80 (252)
T ss_dssp CBSSEECCGGGSTTEEEEEEEC----CEEEEEEEEECSSSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEE
T ss_pred CCCCeECCCCCcCCEEEEEEecCCCCCCCEEEEEEEEeCCEEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEE
Confidence 789999999999999999752 3589999999999999999999653 345688999988765544445555565
Q ss_pred EE-EcCCCCCCCCCCceEEEEECCC----cccCCCccccccCCCCCCCCCCCcEEEEecccCCCCC-CCccceeEEEeee
Q psy6528 143 RA-IVGDFTFSNFDNDIALLRLNDR----VPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG-RPACIIRDVEVPI 216 (421)
Q Consensus 143 ~~-i~p~y~~~~~~~DIALlkL~~p----v~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~v 216 (421)
++ +||+|+.....||||||+|++| +.|+++++|||||........+..|+++|||.+.... ..+..|+++.+++
T Consensus 81 ~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~ 160 (252)
T 1rtf_B 81 KYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRL 160 (252)
T ss_dssp EEEECTTCCTTTCTTCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEE
T ss_pred EEEeCCCCCcCCCCCCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEE
Confidence 55 5699999889999999999999 8999999999999864445568899999999886554 3567899999999
Q ss_pred echhhhccccCCCCCCCCCCeEEeccCCCC------CCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEE
Q psy6528 217 LSNQYCRTSTNYSSTRISDNMMCAGYPEGM------KDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTR 290 (421)
Q Consensus 217 ~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~------~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~ 290 (421)
++.++|+.... ....+.++||||+...++ .++|+|||||||++.. +++|+|+||+|||.+|+..+.|++|||
T Consensus 161 ~~~~~C~~~~~-~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~ 238 (252)
T 1rtf_B 161 YPSSRCTSQHL-LNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLN-DGRMTLVGIISWGLGCGQKDVPGVYTK 238 (252)
T ss_dssp CCGGGSSTTTT-TTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEE
T ss_pred ecHHHhhhhhc-cCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEe-CCcEEEEEEEEEcCCCCCCCCCeEEEE
Confidence 99999985432 234578999999866544 7899999999999987 789999999999999998888999999
Q ss_pred eceehhhhhhhcc
Q psy6528 291 ITRYVEWIKEKSK 303 (421)
Q Consensus 291 V~~y~~WI~~~~~ 303 (421)
|+.|.+||+++++
T Consensus 239 V~~y~~WI~~~~~ 251 (252)
T 1rtf_B 239 VTNYLDWIRDNMR 251 (252)
T ss_dssp GGGGHHHHHHHCC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999885
No 28
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=100.00 E-value=9.6e-52 Score=383.28 Aligned_cols=230 Identities=36% Similarity=0.658 Sum_probs=195.3
Q ss_pred cccCeeCCCCCCceEEEEee-cCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSY-FNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~-~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p 147 (421)
|+||++|.+++|||+|+|.. .+.++|+||||+++||||||||+... ..+.|++|.++........+...+.++ +||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAhC~~~~--~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp 78 (241)
T 2jkh_A 1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQA--KRFKVRVGDRNTEQEEGGEAVHEVEVVIKHN 78 (241)
T ss_dssp CBSSEECCTTSSTTEEEEECTTSCEEEEEEECSSSEEEECGGGGGSC--SSCEEEESCSBTTCCCSCCEEECEEEEEECT
T ss_pred CCCCEECCCCCcCcEEEEEcCCCCcEEEEEEeeCCEEEEcHHHcCCC--CcEEEEECCccCCCCCCCcEEEEeEEEEeCC
Confidence 78999999999999999975 45789999999999999999999653 356899998876554444455556555 469
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCC---CCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcc
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLN---NTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~---~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
+|+.....||||||+|++|+.|+++|+|||||.... ....+..|+++|||.+...+..+..|+++.+++++.++|+.
T Consensus 79 ~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 158 (241)
T 2jkh_A 79 RFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKL 158 (241)
T ss_dssp TCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHH
T ss_pred CCCCCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcc
Confidence 999988999999999999999999999999997421 13458899999999987766677889999999999999985
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
.+. ..++++||||+...+..++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||+++++.
T Consensus 159 ~~~---~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 234 (241)
T 2jkh_A 159 SSS---FIITQNMFCAGYDTKQEDACQGDSGGPHVTRF-KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT 234 (241)
T ss_dssp HCS---SCCCTTEEEESCSSSSCBCCTTTTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC-
T ss_pred ccc---CcCCCCeEEeeCCCCCCccCcCcCCCeeEEEE-CCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHhcc
Confidence 432 35789999998766668999999999999986 68999999999999999888999999999999999999986
Q ss_pred c
Q psy6528 305 G 305 (421)
Q Consensus 305 ~ 305 (421)
.
T Consensus 235 ~ 235 (241)
T 2jkh_A 235 R 235 (241)
T ss_dssp -
T ss_pred c
Confidence 4
No 29
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=100.00 E-value=1.5e-51 Score=384.03 Aligned_cols=230 Identities=32% Similarity=0.630 Sum_probs=193.2
Q ss_pred cccCeeCCCCCCceEEEEeec-CeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF-NRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~-~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p 147 (421)
|+||++|.+++|||+|+|... +.++|+||||+++||||||||+.+. ..+.|++|.++........+...+.++ +||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLI~~~~VLTAAHC~~~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp 78 (250)
T 1aut_C 1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDES--KKLLVRLGEYDLRRWEKWELDLDIKEVFVHP 78 (250)
T ss_dssp CBSCEECCTTSCTTEEEEECTTSCEEEEEEEEETTEEEECGGGSSSC--SCCEEEESCCBTTCCCTTCEEEEEEEEEECT
T ss_pred CCCCEECCCCCCCCEEEEecCCCceEEEEEEeeCCEEEEChHHcCCC--CceEEEEcccccCCCCCccEEEEEEEEEECC
Confidence 789999999999999999864 4689999999999999999999653 346799999887654444455556554 569
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCC----CCCCCCcEEEEecccCCCCCCCc-----cceeEEEeeeec
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLN----NTYEDETGVVMGWGTLEESGRPA-----CIIRDVEVPILS 218 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~----~~~~~~~~~v~GwG~~~~~~~~~-----~~L~~~~~~v~~ 218 (421)
+|+..+..||||||||++|+.|+++++|||||.... ....+..|+++|||.+......+ ..|+++.+++++
T Consensus 79 ~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~ 158 (250)
T 1aut_C 79 NYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVP 158 (250)
T ss_dssp TCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEEC
T ss_pred CCCCCCCCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEec
Confidence 999988999999999999999999999999997421 23468899999999876544332 479999999999
Q ss_pred hhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhh
Q psy6528 219 NQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWI 298 (421)
Q Consensus 219 ~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI 298 (421)
.++|++.+. ..++++||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||
T Consensus 159 ~~~C~~~~~---~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI 234 (250)
T 1aut_C 159 HNECSEVMS---NMVSENMLCAGILGDRQDACEGDSGGPMVASF-HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWI 234 (250)
T ss_dssp HHHHHHHCS---SCCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHH
T ss_pred HHHhhHHhc---cCCCCCEEEeCCCCCCCCCCCCCCchheEEEE-CCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHH
Confidence 999985432 35789999998766668999999999999986 78999999999999999888999999999999999
Q ss_pred hhhcccc
Q psy6528 299 KEKSKEG 305 (421)
Q Consensus 299 ~~~~~~~ 305 (421)
++++++.
T Consensus 235 ~~~~~~~ 241 (250)
T 1aut_C 235 HGHIRDK 241 (250)
T ss_dssp HHHHC--
T ss_pred HHHhhcc
Confidence 9999764
No 30
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=100.00 E-value=2.3e-51 Score=381.63 Aligned_cols=229 Identities=35% Similarity=0.665 Sum_probs=191.0
Q ss_pred cccCeeCCCCCCceEEEEeec-C--eeEEEEEEEeCCEEEEccccccC--cceeeEEEEEeeeeccCCCCCCceeEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF-N--RFYCGGTLINDRYVLTAAHCVKG--RLWFLIKATFGEYDRCDTSSKPESRFVIR- 143 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~-~--~~~CgGtLIs~~~VLTAAhC~~~--~~~~~~~v~~G~~~~~~~~~~~~~~~v~~- 143 (421)
|+||++|.+++|||+|+|... + .++|+||||+++||||||||+.. .....+.|.+|..+.... .+...+.+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~---~~~~~v~~i 77 (245)
T 2f9n_A 1 IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQ---DQLLPVSRI 77 (245)
T ss_dssp CBSCEECCTTSCTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGCSSCCCGGGEEEECSCSBTTTT---CCCBCEEEE
T ss_pred CCCCeECCCCCCCcEEEEEEcCCCcceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEEeCCcccccC---ceEEEEEEE
Confidence 789999999999999999873 3 58999999999999999999954 334567888998766432 23334444
Q ss_pred EEcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCC--ccceeEEEeeeechhh
Q psy6528 144 AIVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRP--ACIIRDVEVPILSNQY 221 (421)
Q Consensus 144 ~i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~--~~~L~~~~~~v~~~~~ 221 (421)
++||+|+.....||||||||++|+.|+++++|||||........+..|+++|||.+...+.. +..|+++.+++++.++
T Consensus 78 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~ 157 (245)
T 2f9n_A 78 IVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHI 157 (245)
T ss_dssp EECTTCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHH
T ss_pred EECCCccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHH
Confidence 45699998889999999999999999999999999986445557899999999988765433 4579999999999999
Q ss_pred hccccCCC------CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceeh
Q psy6528 222 CRTSTNYS------STRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYV 295 (421)
Q Consensus 222 C~~~~~~~------~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~ 295 (421)
|+..+... ...+++.||||+. .+.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.
T Consensus 158 C~~~~~~~~~~~~~~~~~~~~~~Ca~~--~~~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~ 234 (245)
T 2f9n_A 158 CDAKYHLGAYTGDDVRIIRDDMLCAGN--SQRDSCQGDSGGPLVCKV-NGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYL 234 (245)
T ss_dssp HHHHHHTTCCSCTTSCCSCTTEEEECC--SSSBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEEEEEGGGGH
T ss_pred hhhhhcccccccccccccccccEeecC--CCCCcCCCCCCCceEEEE-CCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHH
Confidence 98543211 1247899999983 457899999999999987 78999999999999999888999999999999
Q ss_pred hhhhhhccc
Q psy6528 296 EWIKEKSKE 304 (421)
Q Consensus 296 ~WI~~~~~~ 304 (421)
+||++++++
T Consensus 235 ~WI~~~~~~ 243 (245)
T 2f9n_A 235 DWIHHYVPK 243 (245)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHHhhc
Confidence 999999875
No 31
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=100.00 E-value=4.2e-51 Score=386.53 Aligned_cols=246 Identities=29% Similarity=0.582 Sum_probs=202.5
Q ss_pred cCCCCCCC--CCCccccCeeCCCCCCceEEEEeecC-----eeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeec
Q psy6528 58 DCSCGETN--DATRIVGGQPTEVNQYPWMVRLSYFN-----RFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDR 129 (421)
Q Consensus 58 ~~~cg~~~--~~~rI~gG~~a~~~~~Pw~v~l~~~~-----~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~ 129 (421)
++.||.+. ...||+||++|.+++|||||+|++.. .++||||||+++||||||||+.+. ....+.|.+|..+.
T Consensus 10 ~~~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~v~~g~~~~ 89 (276)
T 2vnt_A 10 KFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRL 89 (276)
T ss_dssp CCCTTCCCC-----CCSSEECCGGGSTTEEEEEEECSSSCEEEEEEEEEEETTEEEECGGGTTTCCCGGGEEEEESCCBS
T ss_pred CCCCCCcCCCCCCcEECCEECCCCCCCcEEEEEEecCCCcceeEEEEEEeeCCEEEECcccccCCCCCccEEEEeeeeec
Confidence 35678654 35799999999999999999997643 479999999999999999999653 34567888998887
Q ss_pred cCCCCCCceeEEEEEE-cCCCCCCC--CCCceEEEEECCCc----ccCCCccccccCCCCCCCCCCCcEEEEecccCCCC
Q psy6528 130 CDTSSKPESRFVIRAI-VGDFTFSN--FDNDIALLRLNDRV----PIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEES 202 (421)
Q Consensus 130 ~~~~~~~~~~~v~~~i-~p~y~~~~--~~~DIALlkL~~pv----~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~ 202 (421)
.......+...+.+++ ||+|+... .++|||||+|+.++ .|+++|+|||||........+..+.++|||.+...
T Consensus 90 ~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~ 169 (276)
T 2vnt_A 90 NSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENST 169 (276)
T ss_dssp SSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTT
T ss_pred cCCCCceEEEEEEEEEEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccC
Confidence 7666666666666654 69997654 46899999998765 58899999999987666667899999999987654
Q ss_pred C-CCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCC
Q psy6528 203 G-RPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGR 281 (421)
Q Consensus 203 ~-~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~ 281 (421)
+ ..+..|+.+.+++++.++|...+.. .....+.++|++...+..++|+|||||||++.. +++|+|+||+|||.+|+.
T Consensus 170 ~~~~~~~l~~~~~~i~~~~~C~~~~~~-~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~-~~~~~lvGIvS~G~~C~~ 247 (276)
T 2vnt_A 170 DYLYPEQLKMTVVKLISHRECQQPHYY-GSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCAL 247 (276)
T ss_dssp CSCCCSBCEEEEEEEECHHHHTSTTTT-GGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSB
T ss_pred CCCcchhheeeeeeEecHHHhhhhhcc-CcccCccceeeccCCCCCCCCCCCCCCeEEEee-CCeEEEEEEEEECCCCCC
Confidence 4 4567899999999999999854332 244677889988777788999999999999987 789999999999999999
Q ss_pred CCCCeEEEEeceehhhhhhhcccc
Q psy6528 282 AGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 282 ~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
.+.|+|||||++|++||+++|++.
T Consensus 248 ~~~P~vyt~V~~y~~WI~~~~~~~ 271 (276)
T 2vnt_A 248 KDKPGVYTRVSHFLPWIRSHTKEE 271 (276)
T ss_dssp TTBCEEEEEGGGGHHHHHHHHSCC
T ss_pred CCCCEEEEEHHHHHHHHHHHhhhh
Confidence 899999999999999999999875
No 32
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=100.00 E-value=2.8e-51 Score=378.52 Aligned_cols=228 Identities=29% Similarity=0.523 Sum_probs=192.2
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|..++.++|+||||+++||||||||+.+ ....|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~---~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~ 77 (234)
T 1orf_A 1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN---KRSQVILGAHSITREEPTKQIMLVKKEFPYPC 77 (234)
T ss_dssp CBSCEECCTTSSTTEEEEECSSSCEEEEEEEETTEEEECTTCCCC---TTCEEEESCSBSSSCCTTCEEECEEEEEECTT
T ss_pred CCCCEECCCCCCCeEEEEccCCceEEEEEEeeCCEEEEchhcCCC---CCceEEEeccccCcCCCceEEEEEEEEEcCCC
Confidence 789999999999999999988889999999999999999999965 345789999877655444455555554 5699
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNY 228 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~ 228 (421)
|+..+..||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|++...+
T Consensus 78 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 157 (234)
T 1orf_A 78 YDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHY 157 (234)
T ss_dssp CCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTT
T ss_pred CCCCCCCCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCcccc
Confidence 99988999999999999999999999999998644456789999999999877666678899999999999999842222
Q ss_pred C-CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC--CCCCCCCCeEEEEec-eehhhhhhhccc
Q psy6528 229 S-STRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA--GCGRAGYPGVYTRIT-RYVEWIKEKSKE 304 (421)
Q Consensus 229 ~-~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~--~c~~~~~p~vyt~V~-~y~~WI~~~~~~ 304 (421)
. ...+.++||||+...+++++|+|||||||+++. +|+||+|||. +|+..+.|++||||+ +|.+||++++++
T Consensus 158 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~~~ 232 (234)
T 1orf_A 158 NFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEG-----VFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIKG 232 (234)
T ss_dssp TTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEETT-----EEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHHCC
T ss_pred ccCCccCCCEEEecCCCCCCcCCCCCCCCeEEECC-----EEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHHHh
Confidence 1 123445999999766678999999999999942 7999999998 898888999999999 999999999875
Q ss_pred c
Q psy6528 305 G 305 (421)
Q Consensus 305 ~ 305 (421)
.
T Consensus 233 ~ 233 (234)
T 1orf_A 233 A 233 (234)
T ss_dssp -
T ss_pred c
Confidence 3
No 33
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=100.00 E-value=1.7e-51 Score=378.52 Aligned_cols=223 Identities=37% Similarity=0.671 Sum_probs=191.1
Q ss_pred cccCeeCCCCCCceEEEEeec-CeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEE-cC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF-NRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAI-VG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~-~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i-~p 147 (421)
|+||++|.+++|||+|+|... +.++|+||||+++||||||||+.. ...+.|++|..+........+...+.+++ ||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp 78 (228)
T 1fxy_A 1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQ--AKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHN 78 (228)
T ss_dssp CBSCEECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGTTS--CSSCEEEEECSCTTTCCCCEEEEEEEEEEECT
T ss_pred CCCCEECCCCCcCcEEEEEcCCCCeeEEEEEeeCCEEEECHHHCCC--CCcEEEEECccCccccCCCcEEEEEEEEEECC
Confidence 789999999999999999875 568999999999999999999953 24568999988775544444555565554 69
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCC-CccceeEEEeeeechhhhcccc
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGR-PACIIRDVEVPILSNQYCRTST 226 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~~v~~~~~C~~~~ 226 (421)
+|+.....||||||||++|+.|+++++|||||.. ....+..|+++|||.+...+. .+..|+++.+++++.++|+..+
T Consensus 79 ~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~--~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 156 (228)
T 1fxy_A 79 RFTKETYDFDIAVLRLKTPITFRMNVAPASLPTA--PPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASY 156 (228)
T ss_dssp TCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCSS--CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHS
T ss_pred CCCCCCCcCcEEEEEECCcccCCCceeccCCCCC--CCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhc
Confidence 9999889999999999999999999999999974 345789999999999876554 5788999999999999998543
Q ss_pred CCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 227 NYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 227 ~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
. ..+++.||||+...++.++|+|||||||+++. +|+||+|||.+|+..+.|++||||++|.+||++++++
T Consensus 157 ~---~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 226 (228)
T 1fxy_A 157 P---GKITSNMFCVGFLEGGKDSCQGDSGGPVVCNG-----QLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAA 226 (228)
T ss_dssp T---TTCCTTEEEESCTTCSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHHH
T ss_pred C---CCCCCCEEEeccCCCCCccccCccccceEECC-----EEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHHHhc
Confidence 2 35788999998766678999999999999953 7999999999999888999999999999999999875
No 34
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=100.00 E-value=3.7e-51 Score=380.41 Aligned_cols=233 Identities=30% Similarity=0.576 Sum_probs=198.3
Q ss_pred cccCeeCCCCCCceEEEEeecC-----eeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCCCCCCceeEEEE
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFN-----RFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDTSSKPESRFVIR 143 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~-----~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~~~~~~~~~v~~ 143 (421)
|+||++|.+++|||+|+|+... .++|+||||+++||||||||+.+. ....+.|++|..+........+...+.+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~ 80 (247)
T 3mhw_U 1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN 80 (247)
T ss_dssp CBSSEECCGGGSTTEEEEEEECTTSCEEEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEE
T ss_pred CCCCEECCCCCCCCEEEEEEecCCCccceEEEEEEEeCCEEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEE
Confidence 7899999999999999997642 589999999999999999999653 3456789999988776655555555665
Q ss_pred EE-cCCCCCCC--CCCceEEEEECCC----cccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCC-CccceeEEEee
Q psy6528 144 AI-VGDFTFSN--FDNDIALLRLNDR----VPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGR-PACIIRDVEVP 215 (421)
Q Consensus 144 ~i-~p~y~~~~--~~~DIALlkL~~p----v~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~~ 215 (421)
++ ||+|+... ..||||||+|++| +.+++.++|||||........+..|+++|||.+..... .+..|+++.++
T Consensus 81 i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~ 160 (247)
T 3mhw_U 81 LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK 160 (247)
T ss_dssp EEECTTCEEC-CCEESCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEE
T ss_pred EEECCCCCCCcCCCCCcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEE
Confidence 54 69998766 5799999999999 78999999999998655566789999999998866543 57789999999
Q ss_pred eechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceeh
Q psy6528 216 ILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYV 295 (421)
Q Consensus 216 v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~ 295 (421)
+++.++|+... .....++++||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|+
T Consensus 161 ~~~~~~C~~~~-~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~ 238 (247)
T 3mhw_U 161 LISHRECQQPH-YYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFL 238 (247)
T ss_dssp EECHHHHTSTT-TTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEEEEEGGGCH
T ss_pred EEChHHhcCcc-ccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEE-CCCEEEEEEEEECCCCCCCCCCeEEEEHHHHH
Confidence 99999998543 23356889999999777778999999999999987 78999999999999999888999999999999
Q ss_pred hhhhhhccc
Q psy6528 296 EWIKEKSKE 304 (421)
Q Consensus 296 ~WI~~~~~~ 304 (421)
+||++++++
T Consensus 239 ~WI~~~~~e 247 (247)
T 3mhw_U 239 PWIRSHTKE 247 (247)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcC
Confidence 999999874
No 35
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=100.00 E-value=2.7e-51 Score=375.50 Aligned_cols=220 Identities=36% Similarity=0.665 Sum_probs=189.5
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|.. +.++|+||||+++||||||||+.+ .+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~-~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 75 (222)
T 1hj8_A 1 IVGGYECKAYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCYKS----RVEVRLGEHNIKVTEGSEQFISSSRVIRHPN 75 (222)
T ss_dssp CBSCEECCTTSCTTEEEEES-SSEEEEEEEEETTEEEECGGGCCS----SCEEEESCSBTTSCCSCCEEEEEEEEEECTT
T ss_pred CCCCEECCCCCCCEEEEEEc-CCcEEEeEEecCCEEEECHHhcCC----CeEEEEcccccccCCCCcEEEEEEEEEECCC
Confidence 78999999999999999974 578999999999999999999962 35789999877654444455556555 4699
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNY 228 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~ 228 (421)
|+.....||||||||++|+.|+++++|||||.. ....+..++++|||.+...+..+..|+++.+++++.++|+..+.
T Consensus 76 y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~--~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~- 152 (222)
T 1hj8_A 76 YSSYNIDNDIMLIKLSKPATLNTYVQPVALPTS--CAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYP- 152 (222)
T ss_dssp CBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSS--CCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHST-
T ss_pred CCCCCCCCcEEEEEECCcccCCCceeccCCCCC--CCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhcc-
Confidence 998889999999999999999999999999974 35578999999999987766677889999999999999985432
Q ss_pred CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 229 SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 229 ~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
..+.+.||||+..+++.++|+|||||||+++. +|+||+|||.+|+..+.|++||||+.|.+||++++++
T Consensus 153 --~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~~~ 221 (222)
T 1hj8_A 153 --GMITNAMFCAGYLEGGKDSCQGDSGGPVVCNG-----ELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMAS 221 (222)
T ss_dssp --TCCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHHC
T ss_pred --CCCCCCeEEeccCCCCCccCCCCcccceEECC-----EEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHhhc
Confidence 35789999998766678999999999999943 7999999999999888999999999999999998864
No 36
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=100.00 E-value=3.6e-51 Score=379.41 Aligned_cols=230 Identities=30% Similarity=0.618 Sum_probs=192.7
Q ss_pred cccCeeCCCCCCceEEEEeecC---eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEE-EE
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFN---RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIR-AI 145 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~---~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~-~i 145 (421)
|+||++|.+++|||+|+|.... .++|+||||+++||||||||+.+.....+.|++|.++..... ..+...+.+ ++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~-~~~~~~v~~i~~ 79 (241)
T 1m9u_A 1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTS-GTQTANVDSYTM 79 (241)
T ss_dssp CBTCEECCTTSSTTEEEEEEESSSEEEEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCT-TCEEEEEEEEEE
T ss_pred CCCCeECCCCCcCeEEEEEecCCceeeeeEEEEEeCCEEEecHHhCCCCCcceEEEEEEeecCCCCC-CceEEEEEEEEe
Confidence 7899999999999999998753 489999999999999999999776566789999998776433 234444554 45
Q ss_pred cCCC--CCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhc
Q psy6528 146 VGDF--TFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCR 223 (421)
Q Consensus 146 ~p~y--~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~ 223 (421)
||+| +.....||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|+
T Consensus 80 hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 159 (241)
T 1m9u_A 80 HENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCT 159 (241)
T ss_dssp CTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHH
T ss_pred CCCcCCCCCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhh
Confidence 6999 77778999999999999999999999999985222347899999999998776667789999999999999998
Q ss_pred cccCC-CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEe----CCCCCCCCCCeEEEEeceehhhh
Q psy6528 224 TSTNY-SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSW----GAGCGRAGYPGVYTRITRYVEWI 298 (421)
Q Consensus 224 ~~~~~-~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~----g~~c~~~~~p~vyt~V~~y~~WI 298 (421)
..+.. ....+.++||||+...++.++|+|||||||++.+ ++|+|+||+|| |.+|+..+.|++||||+.|.+||
T Consensus 160 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~--~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI 237 (241)
T 1m9u_A 160 AAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPD--GGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWI 237 (241)
T ss_dssp HHHTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEES--SSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHH
T ss_pred hhhcccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeC--CCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHH
Confidence 54321 1123789999998766668999999999999974 78999999999 46798878999999999999999
Q ss_pred hhhc
Q psy6528 299 KEKS 302 (421)
Q Consensus 299 ~~~~ 302 (421)
+++|
T Consensus 238 ~~~~ 241 (241)
T 1m9u_A 238 GDNS 241 (241)
T ss_dssp HHHC
T ss_pred hhhC
Confidence 9875
No 37
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=100.00 E-value=1.7e-51 Score=406.45 Aligned_cols=245 Identities=32% Similarity=0.641 Sum_probs=201.0
Q ss_pred CCCCCCCC---CCccccC-eeCCCCCCceEEEEeecC--------eeEEEEEEEeCCEEEEccccccCcce--eeEEEEE
Q psy6528 59 CSCGETND---ATRIVGG-QPTEVNQYPWMVRLSYFN--------RFYCGGTLINDRYVLTAAHCVKGRLW--FLIKATF 124 (421)
Q Consensus 59 ~~cg~~~~---~~rI~gG-~~a~~~~~Pw~v~l~~~~--------~~~CgGtLIs~~~VLTAAhC~~~~~~--~~~~v~~ 124 (421)
..||.... ..||+|| .+|..++|||||+|.+.. .++||||||+++||||||||+.+... ..+.|++
T Consensus 116 ~~CG~~~~~~~~~rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~ 195 (394)
T 2b9l_A 116 SFCGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRA 195 (394)
T ss_dssp CCTTBCCTTCSSCEEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEE
T ss_pred CCCCCCCCCCCCceeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecCCCCCcccEEEEe
Confidence 46887653 3599999 899999999999997642 58999999999999999999965432 5689999
Q ss_pred eeeeccCCCC--CCceeEEEE-EEcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCC
Q psy6528 125 GEYDRCDTSS--KPESRFVIR-AIVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEE 201 (421)
Q Consensus 125 G~~~~~~~~~--~~~~~~v~~-~i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~ 201 (421)
|+++...... ..+...+.+ ++||+|+.....||||||||++|+.|+++|+|||||.. .....+..|+++|||.+..
T Consensus 196 G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~-~~~~~~~~~~v~GWG~t~~ 274 (394)
T 2b9l_A 196 GEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQ-SQIFDSTECFASGWGKKEF 274 (394)
T ss_dssp SCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCT-TCCCCCSCEEEEECCTTTT
T ss_pred ceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCc-ccCccCCEEEEEeccCccC
Confidence 9988754432 234445555 45699999889999999999999999999999999975 3345678999999998865
Q ss_pred CC--CCccceeEEEeeeechhhhccccCC----CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEe--cCCceEEEEEE
Q psy6528 202 SG--RPACIIRDVEVPILSNQYCRTSTNY----SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFER--EDSRYEQIGIV 273 (421)
Q Consensus 202 ~~--~~~~~L~~~~~~v~~~~~C~~~~~~----~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~--~~~~~~lvGI~ 273 (421)
+. ..+..|+++.+++++.++|+..+.. ....++++||||+... ++++|+|||||||++.. .+++|+|+||+
T Consensus 275 ~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~~-g~d~C~GDSGGPLv~~~~~~~~~~~lvGIv 353 (394)
T 2b9l_A 275 GSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQ-GKDTCTGDGGSPLFCPDPRNPSRYMQMGIV 353 (394)
T ss_dssp TCTTSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCBS-SCSCCSSCTTCEEEEEETTEEEEEEEEEEE
T ss_pred CCCCcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEeeCCC-CCcCCCCCcchhhEEEEcCCCCeEEEEEEE
Confidence 43 3567899999999999999854321 1124789999998643 57999999999999973 25789999999
Q ss_pred EeCCCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 274 SWGAGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 274 S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
|||.+|+..+.|+|||||+.|++||++++++.
T Consensus 354 S~G~~C~~~~~PgVYT~V~~y~~WI~~~i~~~ 385 (394)
T 2b9l_A 354 AWGIGCGDENVPGVYANVAHFRNWIDQEMQAK 385 (394)
T ss_dssp SCTTCCCBSSSCEEEEEGGGGHHHHHHHHHHT
T ss_pred EECCCCCCCCCCeEEEEHHHhHHHHHHHHHhc
Confidence 99999998889999999999999999998754
No 38
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=100.00 E-value=5.2e-51 Score=373.90 Aligned_cols=220 Identities=35% Similarity=0.637 Sum_probs=189.3
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|+..+.++|+||||+++||||||||+.. .+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 76 (223)
T 1lo6_A 1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCKKP----NLQVFLGKHNLRQRESSQEQSSVVRAVIHPD 76 (223)
T ss_dssp CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCT----TCEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CCCCEECCCCCCCCEEEEecCCCEEEEeEEecCCEEEECccCCCC----CeEEEEcceecCCCCCCcEEEEEEEEEECCC
Confidence 789999999999999999888889999999999999999999863 35789999887655444455555554 5699
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNY 228 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~ 228 (421)
|+..+..||||||+|++|+.|+++++|||||.. ....+..|+++|||.+. .+..+..|+++.+++++.++|+..+.
T Consensus 77 y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~--~~~~~~~~~v~GwG~~~-~~~~~~~l~~~~~~~~~~~~C~~~~~- 152 (223)
T 1lo6_A 77 YDAASHDQDIMLLRLARPAKLSELIQPLPLERD--CSANTTSCHILGWGKTA-DGDFPDTIQCAYIHLVSREECEHAYP- 152 (223)
T ss_dssp CCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCC--TTCCCCEEEEEESSCCT-TSSCCSBCEEEEEEEECHHHHHHHST-
T ss_pred CCCCCCcCeEEEEEECCcccCCCceeecccCCC--CCCCCCEEEEEEECCCC-CCCcCceeeEEEEEEeCHHHhhhhhC-
Confidence 999889999999999999999999999999974 34678999999999986 55567789999999999999985432
Q ss_pred CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 229 SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 229 ~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
..++++||||+...++.++|+|||||||++.+ +|+||+||| ..|+..+.|++||||+.|.+||++++++
T Consensus 153 --~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 222 (223)
T 1lo6_A 153 --GQITQNMLCAGDEKYGKDSCQGDSGGPLVCGD-----HLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQA 222 (223)
T ss_dssp --TTCCTTEEEEECTTTCCBCCTTTTTCEEEETT-----EEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC-
T ss_pred --CCCCCCeEEeecCCCCCeeccccCCCcEEeCC-----EEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhcc
Confidence 35789999999766678999999999999943 799999999 6898888999999999999999999864
No 39
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=100.00 E-value=4.1e-51 Score=374.56 Aligned_cols=220 Identities=35% Similarity=0.692 Sum_probs=187.8
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+| +.+.++|+||||+++||||||||+. ..+.|++|..+........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l-~~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 75 (223)
T 3mfj_A 1 IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYK----SGIQVRLGEDNINVVEGNEQFISASKSIVHPS 75 (223)
T ss_dssp CBSCEECCTTSSTTEEEE-ESSSEEEEEEEEETTEEEECGGGCC----SSCEEEESCSSTTSCCSCCEEEEEEEEEECTT
T ss_pred CCCCEECCCCcCCEEEEE-EcCCeEEEEEEecCCEEEEhHHhcC----CCcEEEECCceecccCCCcEEEEeeEEEECCC
Confidence 789999999999999999 4667999999999999999999994 346789999877554444455555554 5699
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCC-CCCCccceeEEEeeeechhhhccccC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEE-SGRPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~-~~~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
|+.....||||||||++|+.|+++++|||||.. ....+..|+++|||.+.. +...+..|+++.+++++.++|+..+.
T Consensus 76 y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 153 (223)
T 3mfj_A 76 YNSNTLNNDIMLIKLKSAASLNSRVASISLPTS--CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYP 153 (223)
T ss_dssp CCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSS--CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHST
T ss_pred CCCCCCCCCEEEEEeCCCcccCCcEeeeECCCC--CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhc
Confidence 999889999999999999999999999999974 345789999999998863 33457789999999999999985432
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
..+++.||||+...++.++|+|||||||++.. +|+||+|||.+|+..+.|++||||++|.+||++++++
T Consensus 154 ---~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 222 (223)
T 3mfj_A 154 ---GQITSNMFCAGYLEGGKDSCQGDSGGPVVCSG-----KLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIAS 222 (223)
T ss_dssp ---TTCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHHH
T ss_pred ---CcCCCCEEEccCCCCCCCcCCCCcccceEECC-----EEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHhc
Confidence 35789999998766678999999999999943 6999999999999888999999999999999998864
No 40
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=100.00 E-value=8e-51 Score=373.91 Aligned_cols=226 Identities=29% Similarity=0.560 Sum_probs=192.3
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|..++.++|+||||+++||||||||+.+.....+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~ 80 (228)
T 2xw9_A 1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPD 80 (228)
T ss_dssp CBCC-CCCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTT
T ss_pred CCCCeECCCCCCCcEEEEEECCCeEEEEEEEeCCEEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCC
Confidence 789999999999999999988889999999999999999999976555678999999887655444455555554 4699
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNY 228 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~ 228 (421)
|+.....||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|++.+..
T Consensus 81 y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~ 160 (228)
T 2xw9_A 81 SQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHH 160 (228)
T ss_dssp CCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTT
T ss_pred CCCCCCCCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCcccc
Confidence 99988999999999999999999999999998645556789999999999877666678899999999999999854322
Q ss_pred CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC-CCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 229 SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA-GCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 229 ~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~-~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
...+++.||||+. ++.++|+|||||||++.. +|+||+|||. .|+..+.|++||||+.|.+||+++++
T Consensus 161 -~~~~~~~~~Ca~~--~~~~~C~GDsGgPL~~~~-----~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 228 (228)
T 2xw9_A 161 -DGAITERLMCAES--NRRDSCKGDAGGPLVCGG-----VLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVLA 228 (228)
T ss_dssp -TTCCCTTEEEECC--SSCBCCTTCTTCEEEETT-----EEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHHC
T ss_pred -CCcccCCEEecCC--CCCccCCCCCcccEEECC-----EEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHhC
Confidence 1357899999984 457899999999999943 8999999998 79887899999999999999999874
No 41
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=100.00 E-value=4.4e-51 Score=378.66 Aligned_cols=230 Identities=37% Similarity=0.663 Sum_probs=193.4
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccC--cceeeEEEEEeeeeccCCCCCCceeEEEE-EEc
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKG--RLWFLIKATFGEYDRCDTSSKPESRFVIR-AIV 146 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~--~~~~~~~v~~G~~~~~~~~~~~~~~~v~~-~i~ 146 (421)
|+||++|.+++|||+|+|. +.++|+||||+++||||||||+.+ .....+.|++|..+..... .+...+.+ ++|
T Consensus 1 IvgG~~a~~~~~Pw~v~l~--~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~--~~~~~v~~i~~h 76 (242)
T 3tvj_B 1 IYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPH--YTQAWSEAVFIH 76 (242)
T ss_dssp CBSCEECCTTSSTTEEEEE--SSEEEEEEEETTTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSC--CEEEEEEEEEEC
T ss_pred CcCCeeCCCCCCCCEEEEe--cCCcEEEEEecCCEEEECHHHCCCCCCCcceEEEEeccccccCcc--cceeeEEEEEeC
Confidence 7899999999999999997 578999999999999999999965 4456678999987764332 23344444 456
Q ss_pred CCCCC-CCCCCceEEEEECCCcccCCCccccccCCCCC--CCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhc
Q psy6528 147 GDFTF-SNFDNDIALLRLNDRVPIVDIIKPVCLPTVLN--NTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCR 223 (421)
Q Consensus 147 p~y~~-~~~~~DIALlkL~~pv~~s~~v~picLp~~~~--~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~ 223 (421)
|+|+. ....||||||||++|+.|+++++|||||.... ....+..++++|||.+.. +..+..|+++.+++++.++|+
T Consensus 77 p~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~-~~~~~~l~~~~~~i~~~~~C~ 155 (242)
T 3tvj_B 77 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQR-GFLARNLMYVDIPIVDHQKCT 155 (242)
T ss_dssp TTCCTTSCSTTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTT-SSCCSBCEEEEEEBCCHHHHH
T ss_pred CCCCCCCCCcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCC-CCcCccceEEeeeEEcHHHHH
Confidence 99987 66789999999999999999999999998533 245688999999998864 556778999999999999998
Q ss_pred cccCC---CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEe-cCCceEEEEEEEeC-CCCCCCCCCeEEEEeceehhhh
Q psy6528 224 TSTNY---SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFER-EDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYVEWI 298 (421)
Q Consensus 224 ~~~~~---~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~-~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~~WI 298 (421)
..+.. ....++++||||+...++.++|+|||||||++.+ .+++|+|+||+||| .+|+..+.|++||||+.|++||
T Consensus 156 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI 235 (242)
T 3tvj_B 156 AAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWI 235 (242)
T ss_dssp HHHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHH
T ss_pred HhhccCCcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHH
Confidence 54321 1235889999999777778999999999999975 47899999999999 7899888999999999999999
Q ss_pred hhhccc
Q psy6528 299 KEKSKE 304 (421)
Q Consensus 299 ~~~~~~ 304 (421)
++++++
T Consensus 236 ~~~i~~ 241 (242)
T 3tvj_B 236 ENIISD 241 (242)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998864
No 42
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=100.00 E-value=6.8e-51 Score=372.91 Aligned_cols=220 Identities=31% Similarity=0.613 Sum_probs=187.1
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcc-eeeEEEEEeeeeccCCCCCCceeEEEEE-EcC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRL-WFLIKATFGEYDRCDTSSKPESRFVIRA-IVG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~-~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p 147 (421)
|+||++|.+++|||+|+|+..+.++|+||||+++||||||||+.+.. ...+.|++|..+... ..+...+.++ +||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~---~~~~~~v~~~~~hp 77 (222)
T 1eq9_A 1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSE---SGDVYDVEDAVVNK 77 (222)
T ss_dssp CBSCEECCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTS---CCEEEEEEEEEECT
T ss_pred CCCCEECCCCCcceEEEEEeCCCeEEEEEEeeCCEEEEhhhcCCCCCCCceEEEEECceecCC---CCeEEEEEEEEECC
Confidence 78999999999999999998888999999999999999999996533 456789999876632 2334445554 569
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccC
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
+|+.....||||||+|++|+.|+++++|||||.... ...+..|+++|||.+...+..+..|+++.+++++.++|++..
T Consensus 78 ~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~-~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~- 155 (222)
T 1eq9_A 78 NYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDE-DLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQ- 155 (222)
T ss_dssp TCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCT-TCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHS-
T ss_pred CCCCCCCCCCEEEEEECCccccCCceEccCCCCCCc-CCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCccc-
Confidence 999888899999999999999999999999998532 356889999999998776667788999999999999998321
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+ .+.+.|+||+. .++.++|+|||||||+++. +|+||+|||.+|+. +.|++||||++|.+||++++++
T Consensus 156 ~---~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~C~~-~~p~vyt~V~~~~~WI~~~~~~ 222 (222)
T 1eq9_A 156 W---RVIDSHICTLT-KRGEGACHGDSGGPLVANG-----AQIGIVSFGSPCAL-GEPDVYTRVSSFVSWINANLKK 222 (222)
T ss_dssp S---SCCTTEEEECC-CTTCBCCTTCTTCEEEETT-----EEEEEEEECSTTTS-SSCEEEEEGGGGHHHHHHTSCC
T ss_pred C---CCCccEEeecC-CCCCeeeeCCccceEEECC-----EEEEEEEECCCcCC-CCCCEEEEHHHHHHHHHHHhhC
Confidence 1 26789999986 4457899999999999943 79999999999987 7899999999999999998864
No 43
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=100.00 E-value=1e-50 Score=373.06 Aligned_cols=222 Identities=31% Similarity=0.525 Sum_probs=188.5
Q ss_pred cccCeeCCCCCCceEEEEee--cC-eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-E
Q psy6528 70 IVGGQPTEVNQYPWMVRLSY--FN-RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-I 145 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~--~~-~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i 145 (421)
|+||++|.+++|||+|+|.+ .+ .++|+||||+++||||||||+.+ .+.|++|.++........+...+.++ +
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 76 (227)
T 1iau_A 1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCWGS----SINVTLGAHNIKEQEPTQQFIPVKRPIP 76 (227)
T ss_dssp CBTCEECCTTSSTTEEEEEEECSSCEEEEEEEEEETTEEEECGGGCCS----EEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred CCCCeECCCCCcCcEEEEEEECCCCceEEEEEEEcCCEEEECHHhCCC----ceEEEEccccccCCCCccEEEEEEEEEC
Confidence 78999999999999999976 33 48999999999999999999964 36899999887655444555556665 4
Q ss_pred cCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccc
Q psy6528 146 VGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 146 ~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
||+|+..+..||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|+..
T Consensus 77 Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~ 156 (227)
T 1iau_A 77 HPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESD 156 (227)
T ss_dssp CTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHH
T ss_pred CCCCCCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhH
Confidence 69999988999999999999999999999999998644456789999999999876666778999999999999999854
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+. .....+.|+||+...++.++|+|||||||+++. +|+||+||| |+..+.|++||||+.|.+||++++++
T Consensus 157 ~~--~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g--c~~~~~p~vyt~v~~~~~WI~~~~~~ 226 (227)
T 1iau_A 157 LR--HYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNK-----VAQGIVSYG--RNNGMPPRACTKVSSFVHWIKKTMKR 226 (227)
T ss_dssp TT--TTCCTTTEEEESCTTSCCBCCTTCTTSEEEETT-----EEEEEEEEE--CTTSCSCEEEEEGGGGHHHHHHHHHC
T ss_pred hc--cccCCCcEEEeECCCCCCeeeecCCCchheEee-----EEEEEEeEe--cCCCCCCeEEEEHHHHHHHHHHHHhh
Confidence 32 223445599999776678999999999999943 799999998 87767899999999999999999875
No 44
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=100.00 E-value=7.8e-52 Score=400.66 Aligned_cols=244 Identities=34% Similarity=0.602 Sum_probs=193.5
Q ss_pred CCCccCCCCCCC----CCCccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCc-----ceeeEEEEE
Q psy6528 54 YPMCDCSCGETN----DATRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGR-----LWFLIKATF 124 (421)
Q Consensus 54 ~~~~~~~cg~~~----~~~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~-----~~~~~~v~~ 124 (421)
.+.|...||... ...||+||++|.+++|||+|+|... +.||||||+++||||||||+... ....+.|++
T Consensus 70 ~~~c~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~--~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~~ 147 (329)
T 1md8_A 70 IPRCLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 147 (329)
T ss_dssp CCCEEECCSCCSSCCCCC--CBSCCBCCTTSCTTEEEEESS--SEEEEEEETTTEEEECGGGTSCTTC-----CCCCEEE
T ss_pred cCCCCCCCCCCCCcccccccccCCEECCCCCCCCeEeeccC--CCcceEEecCCEEEecCCEEEeCCcccCCCceEEEEe
Confidence 567888899853 3579999999999999999999753 47999999999999999999632 234567899
Q ss_pred eeeeccCCCCCCceeEEEE-EEcCCCCCC---CCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCC
Q psy6528 125 GEYDRCDTSSKPESRFVIR-AIVGDFTFS---NFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLE 200 (421)
Q Consensus 125 G~~~~~~~~~~~~~~~v~~-~i~p~y~~~---~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~ 200 (421)
|.++...... .+...+.+ ++||+|+.. ...||||||||++|+.|+++|+|||||........+..++++|||.+.
T Consensus 148 G~~~~~~~~~-~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~ 226 (329)
T 1md8_A 148 GHTNVEELMK-LGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME 226 (329)
T ss_dssp SCSBHHHHHH-HCCCCEEEEEECSSCCSSCTTCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCS
T ss_pred cccccccccc-ccceeeEEEEECCCcccccCCCCCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCC
Confidence 9876432111 11223444 457999865 678999999999999999999999999753333468899999999876
Q ss_pred CCCCCccceeEEEeeeechhhhccccCC--CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEe-cCCceEEEEEEEeCC
Q psy6528 201 ESGRPACIIRDVEVPILSNQYCRTSTNY--SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFER-EDSRYEQIGIVSWGA 277 (421)
Q Consensus 201 ~~~~~~~~L~~~~~~v~~~~~C~~~~~~--~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~-~~~~~~lvGI~S~g~ 277 (421)
.. .+..|+++.+++++.++|++.+.. ....++++||||+...+++++|+|||||||++.+ .+++|+|+||+|||.
T Consensus 227 ~~--~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~ 304 (329)
T 1md8_A 227 EK--IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 304 (329)
T ss_dssp SS--BCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECS
T ss_pred CC--CCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECC
Confidence 54 567899999999999999853211 1234788999999766678999999999999964 468999999999999
Q ss_pred CCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 278 GCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 278 ~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+|+. .|++||||+.|++||+++|++
T Consensus 305 ~C~~--~~gvyT~V~~y~~WI~~~i~~ 329 (329)
T 1md8_A 305 GCSR--GYGFYTKVLNYVDWIKKEMEE 329 (329)
T ss_dssp SSSS--SCEEEEEGGGTHHHHHHHHHC
T ss_pred CcCC--CCcEEEEHHHHHHHHHHHHhC
Confidence 9984 489999999999999998863
No 45
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=100.00 E-value=1.7e-50 Score=373.62 Aligned_cols=227 Identities=28% Similarity=0.580 Sum_probs=192.4
Q ss_pred cccCeeCCCCCCceEEEEeec--Ce--eEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF--NR--FYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA- 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~--~~--~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~- 144 (421)
|+||++|.+++|||+|+|.+. +. ++|+||||+++||||||||+.+. ..+.|++|.++........+...+.++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~--~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 78 (236)
T 1elt_A 1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSA--RTWRVVLGEHNLNTNEGKEQIMTVNSVF 78 (236)
T ss_dssp CBSSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSSC--CCEEEEESCSBTTSCCSCCEEECEEEEE
T ss_pred CCCCEECCCCCCCCEEEEEEecCCceeeEEEEEEEeCCEEEECHHhhCCc--CceEEEEccccCCCCCCCcEEEEEEEEE
Confidence 789999999999999999863 33 89999999999999999999653 467899999887655444455555554
Q ss_pred EcCCCCCCCC--CCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhh
Q psy6528 145 IVGDFTFSNF--DNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYC 222 (421)
Q Consensus 145 i~p~y~~~~~--~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C 222 (421)
+||+|+.... .||||||||++|+.|++.++|||||........+..|+++|||.+...+..+..|+++.+++++.++|
T Consensus 79 ~hp~y~~~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C 158 (236)
T 1elt_A 79 IHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATC 158 (236)
T ss_dssp ECTTCCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHH
T ss_pred ECCCCCCCCCCCCccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHh
Confidence 5699988776 89999999999999999999999998644455689999999999877666678899999999999999
Q ss_pred ccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC--CCCCCCCCeEEEEeceehhhhhh
Q psy6528 223 RTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA--GCGRAGYPGVYTRITRYVEWIKE 300 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~--~c~~~~~p~vyt~V~~y~~WI~~ 300 (421)
+....+ ...+++.||||+. .+ .++|+|||||||++.. +++|+|+||+|||. +|+..+.|++||||+.|.+||++
T Consensus 159 ~~~~~~-~~~~~~~~~Ca~~-~~-~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 234 (236)
T 1elt_A 159 SSSGWW-GSTVKTTMVCAGG-GA-NSGCNGDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNG 234 (236)
T ss_dssp TSTTTT-GGGSCTTEEEECC-SS-CBCCTTCTTCEEEEEE-TTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHH
T ss_pred cccccc-CCcCCcceEEecC-CC-CccCCCCCCCeeEEEE-CCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHh
Confidence 854222 3457899999983 33 7899999999999987 78999999999985 79887899999999999999998
Q ss_pred hc
Q psy6528 301 KS 302 (421)
Q Consensus 301 ~~ 302 (421)
+|
T Consensus 235 ~i 236 (236)
T 1elt_A 235 IM 236 (236)
T ss_dssp HC
T ss_pred hC
Confidence 75
No 46
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=100.00 E-value=7.6e-51 Score=405.12 Aligned_cols=247 Identities=36% Similarity=0.665 Sum_probs=203.4
Q ss_pred CCCCccCCCCCCCC--CCccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCc--ceeeEEEEEeeee
Q psy6528 53 DYPMCDCSCGETND--ATRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGR--LWFLIKATFGEYD 128 (421)
Q Consensus 53 ~~~~~~~~cg~~~~--~~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~--~~~~~~v~~G~~~ 128 (421)
..+.|...||.... ..||+||++|.+++|||+|+|.. .++|+||||+++||||||||+.+. ....+.|++|.++
T Consensus 143 ~~p~C~~~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~--~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~V~~G~~~ 220 (403)
T 1zjk_A 143 SLPVCEPVCGLSARTTGGQIYGGQKAKPGDFPWQVLILG--GTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLK 220 (403)
T ss_dssp SCCEEEECCCCCSSCCSCCCSSCEECCTTSSTTEEEEEE--SCCEEEEEETTTEEEECHHHHGGGTTCSTTEEEEESCSB
T ss_pred cCCCCCCCCCCCCCCCCccccCCcCCCCCCcCCEeEecc--CCceEEEEecCCEEEEcHHhCCCCCCCcceEEEEccccc
Confidence 46778889998653 47999999999999999999986 568999999999999999999653 2456789999985
Q ss_pred ccCCCCCCceeEEEEE-EcCCCCCC-CCCCceEEEEECCCcccCCCccccccCCCCCC--CCCCCcEEEEecccCCCCCC
Q psy6528 129 RCDTSSKPESRFVIRA-IVGDFTFS-NFDNDIALLRLNDRVPIVDIIKPVCLPTVLNN--TYEDETGVVMGWGTLEESGR 204 (421)
Q Consensus 129 ~~~~~~~~~~~~v~~~-i~p~y~~~-~~~~DIALlkL~~pv~~s~~v~picLp~~~~~--~~~~~~~~v~GwG~~~~~~~ 204 (421)
.. ....+...+.++ +||+|+.. ...||||||||++|+.|+++|+|||||..... ...+..++++|||.+..+ .
T Consensus 221 ~~--~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~-~ 297 (403)
T 1zjk_A 221 RL--SPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRG-F 297 (403)
T ss_dssp TT--CSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSS-C
T ss_pred cC--CCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCC-c
Confidence 32 223344445554 56999887 78899999999999999999999999975322 356889999999988654 4
Q ss_pred CccceeEEEeeeechhhhccccCCC---CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEe-cCCceEEEEEEEeC-CCC
Q psy6528 205 PACIIRDVEVPILSNQYCRTSTNYS---STRISDNMMCAGYPEGMKDSCQGDSGGPMVFER-EDSRYEQIGIVSWG-AGC 279 (421)
Q Consensus 205 ~~~~L~~~~~~v~~~~~C~~~~~~~---~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~-~~~~~~lvGI~S~g-~~c 279 (421)
.+..|+++.+++++.++|+..+... ...++++||||+...+++++|+|||||||++.+ .+++|+|+||+||| .+|
T Consensus 298 ~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C 377 (403)
T 1zjk_A 298 LARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNC 377 (403)
T ss_dssp CCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC
T ss_pred cCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCC
Confidence 5778999999999999998643221 125889999999777678999999999999975 46899999999999 789
Q ss_pred CCCCCCeEEEEeceehhhhhhhccc
Q psy6528 280 GRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 280 ~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+..+.|+|||||+.|++||+++|++
T Consensus 378 ~~~~~p~vyt~V~~y~~WI~~~i~~ 402 (403)
T 1zjk_A 378 GEAGQYGVYTKVINYIPWIENIISD 402 (403)
T ss_dssp --CCCCEEEEEGGGGHHHHHHHHTT
T ss_pred CCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 9888899999999999999999864
No 47
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=100.00 E-value=7.6e-51 Score=373.09 Aligned_cols=222 Identities=34% Similarity=0.625 Sum_probs=189.0
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEE-EEcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIR-AIVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~-~i~p~ 148 (421)
|+||++|.+++|||+|+|..++.++|+||||+++||||||||+.+.....+.|++|.++... ..+...+.+ ++||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~---~~~~~~v~~i~~hp~ 77 (224)
T 1pq7_A 1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTS---GGITSSLSSVRVHPS 77 (224)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSS---SSEEECEEEEEECTT
T ss_pred CCCCEECCCCCcCeEEEEEECCCeEEEEEEecCCEEEEcHHccCCCCCCceEEEeCcceecC---CCEEEEEEEEEECCC
Confidence 78999999999999999998888999999999999999999997765667889999887632 233444444 45699
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCC-CCccceeEEEeeeechhhhccccC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG-RPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
|+.. .||||||||++|+.|+++++|||||........+..|+++|||.+...+ ..+..|+++.+++++.++|+..+.
T Consensus 78 y~~~--~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~ 155 (224)
T 1pq7_A 78 YSGN--NNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYG 155 (224)
T ss_dssp CBTT--BTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHC
T ss_pred CCCC--CCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhc
Confidence 9876 7999999999999999999999999643445678999999999987665 556789999999999999986543
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhc
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKS 302 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~ 302 (421)
...+.+.||||+...++.++|+|||||||++.+ + +|+||+|||.+|+..+.|++||||+.|.+||++++
T Consensus 156 --~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~--g--~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i 224 (224)
T 1pq7_A 156 --TSAITNQMFCAGVSSGGKDSCQGDSGGPIVDSS--N--TLIGAVSWGNGCARPNYSGVYASVGALRSFIDTYA 224 (224)
T ss_dssp --TTTSCTTEEEECCTTCCCBCCTTCTTCEEECTT--C--CEEEEEEECSSSSCTTCCEEEEETTTSHHHHHHHC
T ss_pred --CCCCCCCeEEeecCCCCCCCCcCCCCcceECcC--C--eEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHhhC
Confidence 134789999998766678999999999999853 2 79999999999998889999999999999999875
No 48
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=100.00 E-value=1.1e-50 Score=371.77 Aligned_cols=219 Identities=28% Similarity=0.590 Sum_probs=186.0
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCC-CCCceeEEEE-EEcC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTS-SKPESRFVIR-AIVG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~-~~~~~~~v~~-~i~p 147 (421)
|+||++|.+++|||+|+|...+.++|+||||+++||||||||+.+ .+.|.+|.++..... ...+...+.+ ++||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp 76 (223)
T 2bdg_A 1 IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQN----SYTIGLGLHSLEADQEPGSQMVEASLSVRHP 76 (223)
T ss_dssp CBTCEECCTTSSTTEEEEECSSCEEEEEEEEETTEEEECGGGCCS----SEEEEESCSBSCGGGCTTCEEEEEEEEEECT
T ss_pred CCCCEECCCCCCCcEEEEeeCCCEEEEEEEecCCEEEEhHHhCCC----CeEEEEeeeecCCCCCCCcEEEEEEEEEeCC
Confidence 789999999999999999988889999999999999999999964 357888987654321 2233444444 4579
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccC
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
+|+.....||||||||++|+.|+++++|||||.. ....+..|+++|||.+..+ ..+..|+++.+++++.++|++.+.
T Consensus 77 ~y~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~--~~~~~~~~~v~GwG~~~~~-~~~~~L~~~~~~~~~~~~C~~~~~ 153 (223)
T 2bdg_A 77 EYNRPLLANDLMLIKLDESVSESDTIRSISIASQ--CPTAGNSCLVSGWGLLANG-RMPTVLQCVNVSVVSEEVCSKLYD 153 (223)
T ss_dssp TTTSSTTCSCCEEEEESSCCCCCSSCCCCCBCSS--CCCTTCEEEEEESCCCTTS-CCCSBCEEEEEEBCCHHHHHHHST
T ss_pred CCCCCCCcCcEEEEEECCcccCCCceecccCCCC--CCCCCCEEEEEeCcccCCC-CCCCcceEEEEEEeCHHHhhhhhC
Confidence 9999889999999999999999999999999974 3557899999999988654 557789999999999999985432
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC-CCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA-GCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~-~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
..+.+.||||+...++.++|+|||||||+++. +|+||+|||. .|+..+.|++||||+.|.+||+++++
T Consensus 154 ---~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 222 (223)
T 2bdg_A 154 ---PLYHPSMFCAGGGQDQKDSCNGDSGGPLICNG-----YLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQ 222 (223)
T ss_dssp ---TTCCTTEEEECCSTTCCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHHH
T ss_pred ---CCCCCCeEeccCCCCCCCcCCCCCCchheEcc-----EEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHhc
Confidence 35788999998756668999999999999953 7999999997 79888899999999999999999875
No 49
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=100.00 E-value=7e-51 Score=376.53 Aligned_cols=222 Identities=32% Similarity=0.637 Sum_probs=188.8
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|.+++.++|+||||+++||||||||+. ..+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~ 76 (237)
T 1ao5_A 1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYV----DQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPG 76 (237)
T ss_dssp CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECTTCCC----SSCEEEESCCBSSSCCSSCEECCEEEEEECTT
T ss_pred CCCCeECCCCCcCCEEEEeeCCCeEEEEEEeeCCEEEECHHHCC----CCCEEEecccccccCCCCcEEEEEEEEEcCCC
Confidence 78999999999999999998888999999999999999999995 346789999877554444444555554 5699
Q ss_pred CCCCCC-----------CCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCC-CCCccceeEEEeee
Q psy6528 149 FTFSNF-----------DNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEES-GRPACIIRDVEVPI 216 (421)
Q Consensus 149 y~~~~~-----------~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~-~~~~~~L~~~~~~v 216 (421)
|+.... .||||||||++|+.|+++++|||||.. ....+..|+++|||.+... ...+..|+++.+++
T Consensus 77 y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~ 154 (237)
T 1ao5_A 77 FNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTK--EPKPGSKCLASGWGSITPTRWQKPDDLQCVFITL 154 (237)
T ss_dssp SCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCS--CCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEE
T ss_pred cCcccccccccccccCCCCCEEEEEeCCccccCCceeCCCcCCC--CCCCCCEEEEEECCccCCCCCCCCCcccEEEEEe
Confidence 987655 899999999999999999999999974 3467899999999988765 45677899999999
Q ss_pred echhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceeh
Q psy6528 217 LSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYV 295 (421)
Q Consensus 217 ~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~ 295 (421)
++.++|++.+ ...+++.||||+...++.++|+|||||||+++. +|+||+||| .+|+..+.|++||||+.|.
T Consensus 155 ~~~~~C~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~ 226 (237)
T 1ao5_A 155 LPNENCAKVY---LQKVTDVMLCAGEMGGGKDTCRDDSGGPLICDG-----ILQGTTSYGPVPCGKPGVPAIYTNLIKFN 226 (237)
T ss_dssp ECHHHHHHHC---SSCCCTTEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEECGGGGH
T ss_pred cChhHhhhhh---cccCCCCEEEEccCCCCCCCCCCCCcceEEECC-----EEeEEEeEcCCCCCCCCCCcEEEEHHHHH
Confidence 9999998543 235789999998445568999999999999943 799999999 7899888999999999999
Q ss_pred hhhhhhcccc
Q psy6528 296 EWIKEKSKEG 305 (421)
Q Consensus 296 ~WI~~~~~~~ 305 (421)
+||+++++++
T Consensus 227 ~WI~~~~~~n 236 (237)
T 1ao5_A 227 SWIKDTMMKN 236 (237)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhc
Confidence 9999998753
No 50
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-50 Score=374.14 Aligned_cols=222 Identities=34% Similarity=0.646 Sum_probs=189.0
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|+..+.++|+||||+++||||||||+.+ .+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~ 76 (238)
T 1spj_A 1 IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISD----NYQLWLGRHNLFDDENTAQFVHVSESFPHPG 76 (238)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS----SEEEEESCSBTTSCCTTCEEECEEEEEECTT
T ss_pred CCCCEECCCCCCCcEEEEEeCCCeeEEEEEecCCEEEEcHHhCCC----CceEEEEeccccCCCCCceEEEEEEEEcCCC
Confidence 789999999999999999988889999999999999999999964 35788999877655444455555554 5699
Q ss_pred CC-----------CCCCCCceEEEEECCCcc-cCCCccccccCCCCCCCCCCCcEEEEecccCCCCC-CCccceeEEEee
Q psy6528 149 FT-----------FSNFDNDIALLRLNDRVP-IVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG-RPACIIRDVEVP 215 (421)
Q Consensus 149 y~-----------~~~~~~DIALlkL~~pv~-~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~ 215 (421)
|+ .....||||||||++|+. |++.++|||||.. ....+..|+++|||.+...+ ..+..|+++.++
T Consensus 77 y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~ 154 (238)
T 1spj_A 77 FNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTE--EPEVGSTCLASGWGSIEPENFSFPDDLQCVDLK 154 (238)
T ss_dssp SCGGGGCC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCSS--CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEE
T ss_pred ccccccccccccccccCCCCeEEEEECccccccCCceeeccCCCC--CCCCCCEEEEEecCCCCCCCCCCcCcccEEEEe
Confidence 98 456789999999999998 9999999999974 34568999999999887544 457789999999
Q ss_pred eechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEecee
Q psy6528 216 ILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRY 294 (421)
Q Consensus 216 v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y 294 (421)
+++.++|++.+. ..+++.||||+...+++++|+|||||||+++. +|+||+||| .+|+..+.|++||||+.|
T Consensus 155 ~~~~~~C~~~~~---~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~y 226 (238)
T 1spj_A 155 ILPNDECKKAHV---QKVTDFMLCVGHLEGGKDTCVGDSGGPLMCDG-----VLQGVTSWGYVPCGTPNKPSVAVRVLSY 226 (238)
T ss_dssp EECHHHHHHHCS---SCCCTTEEEEECTTCSSBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEEGGGG
T ss_pred ecCHHHhhhhcc---CCCCCCeEEeeCCCCCCCCCCCCCCCcEEEcC-----EEEEEEEeCCCCCCCCCCCeEEEEHHHh
Confidence 999999985432 34789999999766678999999999999953 899999999 689988899999999999
Q ss_pred hhhhhhhcccc
Q psy6528 295 VEWIKEKSKEG 305 (421)
Q Consensus 295 ~~WI~~~~~~~ 305 (421)
.+||+++++++
T Consensus 227 ~~WI~~~i~~~ 237 (238)
T 1spj_A 227 VKWIEDTIAEN 237 (238)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHhhcC
Confidence 99999998753
No 51
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=100.00 E-value=4.2e-51 Score=405.45 Aligned_cols=241 Identities=33% Similarity=0.639 Sum_probs=199.4
Q ss_pred CCCCCCCCCccccCeeCCCCCCceEEEEeec--C--eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCC-
Q psy6528 60 SCGETNDATRIVGGQPTEVNQYPWMVRLSYF--N--RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSS- 134 (421)
Q Consensus 60 ~cg~~~~~~rI~gG~~a~~~~~Pw~v~l~~~--~--~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~- 134 (421)
.|| .....||+||++|..++|||||+|.+. + .++||||||+++||||||||+.+.....+.|++|+++.....+
T Consensus 110 ~CG-~~~~~rIvgG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~ 188 (408)
T 2xxl_A 110 DCG-NFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDC 188 (408)
T ss_dssp CCS-CCCCCCCCSSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTTTCTTTEEEEEESCSBTTCSCCE
T ss_pred ccC-CCCCCceECCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcCCCCCceEEEEeeeeECCCccch
Confidence 688 445789999999999999999999873 2 6899999999999999999997655567899999988754432
Q ss_pred -----------CCceeEEEEE-EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCC---CCCCCCcEEEEecccC
Q psy6528 135 -----------KPESRFVIRA-IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLN---NTYEDETGVVMGWGTL 199 (421)
Q Consensus 135 -----------~~~~~~v~~~-i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~---~~~~~~~~~v~GwG~~ 199 (421)
..+...+.++ +||+|+..+..||||||||++|+.|+++|+|||||.... ....+..++++|||.+
T Consensus 189 ~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t 268 (408)
T 2xxl_A 189 RQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTT 268 (408)
T ss_dssp EEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCB
T ss_pred hhcccccccCCceEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcC
Confidence 2233445554 569999988999999999999999999999999997422 1456889999999998
Q ss_pred CCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEe-----cCCceEEEEEEE
Q psy6528 200 EESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFER-----EDSRYEQIGIVS 274 (421)
Q Consensus 200 ~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~-----~~~~~~lvGI~S 274 (421)
..+. .+..|+++.+++++.++|++.+.. .+..+||||+... ++++|+|||||||++.. .+++|+|+||+|
T Consensus 269 ~~~~-~s~~L~~~~v~iv~~~~C~~~~~~---~~~~~~iCAg~~~-g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS 343 (408)
T 2xxl_A 269 ENGS-SSDVLLQANVPLQPRSACSQAYRR---AVPLSQLCVGGGD-LQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVS 343 (408)
T ss_dssp TTBC-SCSBCEEEEEEEECHHHHHHHHTS---CCCTTEEEECCSC-SSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEE
T ss_pred CCCC-CCchheEeeeeecCHHHHHHHhcc---cCCCceEeecCCC-CCccCCCcccChhhcCccceEEECCEEEEEEEEE
Confidence 7654 578899999999999999865432 2456999998654 57999999999995432 256899999999
Q ss_pred eC-CCCCCCCCCeEEEEeceehhhhhhhcccce
Q psy6528 275 WG-AGCGRAGYPGVYTRITRYVEWIKEKSKEGC 306 (421)
Q Consensus 275 ~g-~~c~~~~~p~vyt~V~~y~~WI~~~~~~~~ 306 (421)
|| .+|+..+.|+|||||+.|++||+++++...
T Consensus 344 ~G~~~Cg~~~~PgVYTrVs~y~~WI~~~i~~~~ 376 (408)
T 2xxl_A 344 QGVVTCGQISLPGLYTNVGEYVQWITDTMASNG 376 (408)
T ss_dssp ECCCCTTSCCCCEEEEEGGGGHHHHHHHHHHHC
T ss_pred ECCCCCCCCCCCeEEEEHHHHHHHHHHHHhhcC
Confidence 99 789988899999999999999999998653
No 52
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=100.00 E-value=3.8e-50 Score=369.21 Aligned_cols=221 Identities=32% Similarity=0.565 Sum_probs=187.5
Q ss_pred cccCeeCCCCCCceEEEEeec--C-eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-E
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF--N-RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-I 145 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~--~-~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i 145 (421)
|+||++|.+++|||+|+|.+. + .++|+||||+++||||||||+.+ .+.|++|.++........+...+.++ +
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 76 (227)
T 1euf_A 1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLGS----SINVTLGAHNIMERERTQQVIPVRRPIP 76 (227)
T ss_dssp CBSCEECCTTSCTTEEEEEEESSSSEEEEEEEEEETTEEEECGGGCCE----EEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred CCCCeECCCCCcCCEEEEEEeCCCCceEEEEEEeeCCEEEECHHHCCC----CcEEEEcccccCCCCCccEEEEEEEEEe
Confidence 789999999999999999763 2 68999999999999999999963 46899999887654444555556654 5
Q ss_pred cCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccc
Q psy6528 146 VGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 146 ~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
||+|+..+..||||||||++|+.|+++++|||||........+..|+++|||.+......+..|+++.+++++.++|+..
T Consensus 77 Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~ 156 (227)
T 1euf_A 77 HPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIAR 156 (227)
T ss_dssp CTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTT
T ss_pred CCCCCCCCCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHh
Confidence 69999988999999999999999999999999998644456789999999999876666678899999999999999854
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+ ...++++||||+...+..+.|+|||||||++.. +|+||+||| |+..+.|++||||+.|.+||++++++
T Consensus 157 ~---~~~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~~~-----~l~Gi~S~g--c~~~~~p~vyt~V~~y~~WI~~~~~~ 225 (227)
T 1euf_A 157 F---KNYIPFTQICAGDPSKRKNSFSGDSGGPLVCNG-----VAQGIVSYG--RNDGTTPDVYTRISSFLSWIHSTMRR 225 (227)
T ss_dssp C---TTCCTTTEEEESCTTSCCBCCTTCTTCEEEETT-----EEEEEEEEC--CTTCCSCEEEEEGGGTHHHHHHHTC-
T ss_pred h---cCcCCCcEEEccCCCCCCcccccCCCCceEECC-----EEEEEEEEe--CCCCCCCeEEEEHHHhHHHHHHHHhh
Confidence 3 234788999998765545678999999999943 899999998 87777899999999999999999874
No 53
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=100.00 E-value=1.2e-50 Score=374.86 Aligned_cols=221 Identities=31% Similarity=0.583 Sum_probs=187.8
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|...+.++|+||||+++||||||||+.+. ..|++|.++........+...+.++ +||.
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~----~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~ 76 (237)
T 2zch_P 1 IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRNK----SVILLGRHSLFHPEDTGQVFQVSHSFPHPL 76 (237)
T ss_dssp CBSCEECCTTSCTTEEEEESSSSEEEEEEEEETTEEEECGGGCCSS----CEEEESCSBSSSCCTTCEEEEEEEEEECTT
T ss_pred CCCCEECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEcHHhcCCC----ceEEEecccccCCCCCcEEEEEEEEecCCC
Confidence 7899999999999999998888899999999999999999999653 3588898876554444455555554 5699
Q ss_pred CCCCCC-----------CCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCC-CccceeEEEeee
Q psy6528 149 FTFSNF-----------DNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGR-PACIIRDVEVPI 216 (421)
Q Consensus 149 y~~~~~-----------~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~~v 216 (421)
|+.... .||||||||++|+.|+++++|||||.. ....+..|+++|||.+...+. .+..|+++.+++
T Consensus 77 y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~ 154 (237)
T 2zch_P 77 YDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQ--EPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHV 154 (237)
T ss_dssp SCGGGGTSSSCCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCSS--CCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEE
T ss_pred cchhhhcccccccCCCCCcceEEEEeCCCCccCCcEeeeECCCC--CCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEE
Confidence 987554 789999999999999999999999974 355689999999999876544 367899999999
Q ss_pred echhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC-CCCCCCCCeEEEEeceeh
Q psy6528 217 LSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA-GCGRAGYPGVYTRITRYV 295 (421)
Q Consensus 217 ~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~-~c~~~~~p~vyt~V~~y~ 295 (421)
++.++|++.+. ..+++.||||+...+++++|+|||||||++.. +|+||+|||. .|+..+.|++||||+.|.
T Consensus 155 ~~~~~C~~~~~---~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~ 226 (237)
T 2zch_P 155 ISNDVCAQVHP---QKVTKFMLCAGRWTGGKSTCSGDSGGPLVCNG-----VLQGITSWGSEPCALPERPSLYTKVVHYR 226 (237)
T ss_dssp ECHHHHHHHCS---SBCCTTEEEEECTTCSCBCCTTCTTCEEESSS-----SEEEEEEECCSSTTCTTCCEEEEEGGGGH
T ss_pred eCHHHhccccc---CCCCceEEeecCCCCCCcccCCCccCeEEECC-----EEEEEEEeCcCCCCCCCCCcEEEEHHHHH
Confidence 99999985432 35788999999766678999999999999853 7999999998 798888999999999999
Q ss_pred hhhhhhccc
Q psy6528 296 EWIKEKSKE 304 (421)
Q Consensus 296 ~WI~~~~~~ 304 (421)
+||+++++.
T Consensus 227 ~WI~~~i~~ 235 (237)
T 2zch_P 227 KWIKDTIVA 235 (237)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999999875
No 54
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=100.00 E-value=2.3e-50 Score=370.65 Aligned_cols=221 Identities=30% Similarity=0.657 Sum_probs=187.1
Q ss_pred cccCeeCCCCCCceEEEEeec-CeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCC-CCCCceeEEEE-EEc
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF-NRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDT-SSKPESRFVIR-AIV 146 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~-~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~-~~~~~~~~v~~-~i~ 146 (421)
|+||++|.+++|||+|+|... +.++|+||||+++||||||||+.+ .+.|++|.++.... ....+...+.+ ++|
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~~v~~~~~H 76 (227)
T 2psx_A 1 IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRKK----VFRVRLGHYSLSPVYESGQQMFQGVKSIPH 76 (227)
T ss_dssp CBTCEECCTTSCTTEEEEEETTTEEEEEEEEEETTEEEECGGGCCS----SCEEEESCCBSSCCCCTTCEEEEEEEEEEC
T ss_pred CCCCEECCCCCCCCEEEEEecCCCceEEEEEEcCCEEEEhHHcCCC----CcEEEEeeeecccCCCCCcEEEEEEEEEeC
Confidence 789999999999999999876 678999999999999999999863 35789999876543 22333444444 456
Q ss_pred CCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCC-CCccceeEEEeeeechhhhccc
Q psy6528 147 GDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG-RPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 147 p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
|+|+.....||||||||++|+.|+++++|||||. .....+..|+++|||.+...+ ..+..|+++.+++++.++|+..
T Consensus 77 p~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~--~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~ 154 (227)
T 2psx_A 77 PGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSS--HCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDA 154 (227)
T ss_dssp TTCCSSSCTTCCEEEEESSCCCCCSSSCCCCBCS--SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEeCCCCCCCCceeeeECCC--CCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhh
Confidence 9999888899999999999999999999999996 345678999999999987654 4577899999999999999854
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+. ..+++.||||+. .++.++|+|||||||++.. +|+||+||| .+|+..+.|++||||+.|.+||++++++
T Consensus 155 ~~---~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 225 (227)
T 2psx_A 155 YP---RQIDDTMFCAGD-KAGRDSCQGDSGGPVVCNG-----SLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQA 225 (227)
T ss_dssp ST---TTCCTTEEEECC-STTCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHHH
T ss_pred cC---CCCCCCEEcccC-CCCCccCCCCCCcceeeCC-----EEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHhc
Confidence 32 357899999985 3457999999999999953 799999999 6899888999999999999999999875
Q ss_pred c
Q psy6528 305 G 305 (421)
Q Consensus 305 ~ 305 (421)
+
T Consensus 226 ~ 226 (227)
T 2psx_A 226 N 226 (227)
T ss_dssp T
T ss_pred C
Confidence 3
No 55
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=100.00 E-value=2.3e-50 Score=368.30 Aligned_cols=216 Identities=27% Similarity=0.523 Sum_probs=188.4
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDF 149 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y 149 (421)
|+||++|.+++|||+|+|...+.++|+||||+++||||||||+.+.....+.|++|.++........+...+.+++.++|
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y 80 (218)
T 2z7f_E 1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGY 80 (218)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCC
T ss_pred CCCCEECCCCccCcEEEEEeCCCcEEEEEEccCCEEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCC
Confidence 78999999999999999998888999999999999999999997765567899999988765554455566666654599
Q ss_pred CCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCC
Q psy6528 150 TFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYS 229 (421)
Q Consensus 150 ~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~ 229 (421)
+.....||||||||++|+.|+++++|||||........+..++++|||.+...+..+..|+++.++++ .+.|+.
T Consensus 81 ~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~----- 154 (218)
T 2z7f_E 81 DPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRR----- 154 (218)
T ss_dssp BTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCT-----
T ss_pred CCCCCCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCc-----
Confidence 88889999999999999999999999999986444567899999999998876667889999999999 999973
Q ss_pred CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEe--CCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 230 STRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSW--GAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 230 ~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~--g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
.|+||+...++.++|+|||||||+++. +|+||+|| |. |+..+.|++||||+.|.+||+++++
T Consensus 155 ------~~~Ca~~~~~~~~~C~GDSGgPl~~~~-----~l~Gi~S~~~g~-C~~~~~p~vyt~V~~~~~WI~~~~~ 218 (218)
T 2z7f_E 155 ------SNVCTLVRGRQAGVCFGDSGSPLVCNG-----LIHGIASFVRGG-CASGLYPDAFAPVAQFVNWIDSIIQ 218 (218)
T ss_dssp ------TSEEEECTTSCCBCCTTCTTCEEEETT-----EEEEEEEEESSS-TTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred ------ceeeeccCCCCCeeCCCcCCCceEEcc-----EEEEEEEeCCcc-CCCCCCCeEEEEHHHhHHHHHHHhC
Confidence 189998766668999999999999853 89999999 66 9887889999999999999999874
No 56
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=100.00 E-value=6.3e-50 Score=370.82 Aligned_cols=226 Identities=27% Similarity=0.506 Sum_probs=189.8
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCC--CCCCceeEEEEEEc-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDT--SSKPESRFVIRAIV- 146 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~--~~~~~~~~v~~~i~- 146 (421)
|+||++|.. +|||+|+|...+.++|+||||+++||||||||+.+.....+.|++|.++.... ....+...+.+++.
T Consensus 1 IvgG~~a~~-~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~ 79 (240)
T 1si5_H 1 VVNGIPTRT-NIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYG 79 (240)
T ss_dssp CBSCEECSS-CCTTEEEEEESSSEEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEEC
T ss_pred CCCCeeCCC-CCCeEEEEEeCCCeEEEEEEeeCCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcC
Confidence 789999999 99999999988889999999999999999999977656678999999877654 22334445555543
Q ss_pred CCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcccc
Q psy6528 147 GDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTST 226 (421)
Q Consensus 147 p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~ 226 (421)
|. .||||||+|++|+.|+++++|||||........+..++++|||.+.... .+..|+++.+++++.++|+..+
T Consensus 80 p~------~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~L~~~~~~~~~~~~C~~~~ 152 (240)
T 1si5_H 80 PE------GSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLIN-YDGLLRVAHLYIMGNEKCSQHH 152 (240)
T ss_dssp SS------TTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSS-CCCBCEEEEEEEECGGGTCC--
T ss_pred CC------CCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCC-CCCeeEEEEEeecCHHHhhhhh
Confidence 43 7999999999999999999999999864455678999999999886543 4678999999999999998543
Q ss_pred CCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 227 NYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 227 ~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
. ....+.+.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||+++++..
T Consensus 153 ~-~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 229 (240)
T 1si5_H 153 R-GKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQ-HKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILTY 229 (240)
T ss_dssp ------CCTTEEEEECSSSCCBCCTTCTTCEEEEEC-SSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred c-CCccCCCCEEeecCCCCCCEeccCCCCCcEEEEE-CCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHhcc
Confidence 2 1123789999999776678999999999999987 789999999999999998889999999999999999999864
No 57
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=100.00 E-value=2.4e-50 Score=370.08 Aligned_cols=219 Identities=34% Similarity=0.623 Sum_probs=184.1
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|+..+.++|+||||+++||||||||+. ..+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 76 (225)
T 1npm_A 1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKK----QKYSVRLGDHSLQSRDQPEQEIQVAQSIQHPC 76 (225)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC----SSCEEEESCSBTTC--CCCEEECEEEEEECTT
T ss_pred CCCCEECCCCCcCcEEEEeeCCceEEEEEEECCCEEEEhHHcCC----CCceEEEeeeEcCCCCCCcEEEEEEEEEECCC
Confidence 78999999999999999988788999999999999999999985 345789999877654444455555554 5699
Q ss_pred C-CC--CCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCC-CCCCCccceeEEEeeeechhhhcc
Q psy6528 149 F-TF--SNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLE-ESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 149 y-~~--~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~-~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
| +. ....||||||||++|+.|+++++|||||.. ....+..|+++|||.+. ..+..+..|+++.+++++.++|+.
T Consensus 77 y~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~ 154 (225)
T 1npm_A 77 YNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANL--CPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCER 154 (225)
T ss_dssp CCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECSS--CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHH
T ss_pred CCCCCccCccccEEEEeeCCcccCCCceeceECCCC--CCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhH
Confidence 9 55 567899999999999999999999999974 34578999999999874 344567789999999999999985
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
.+. ..+++.||||+..+ +.++|+|||||||+++. +|+||+||| ..|+..+.|++||||+.|++||+++++
T Consensus 155 ~~~---~~~~~~~~Ca~~~~-~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 225 (225)
T 1npm_A 155 AYP---GKITEGMVCAGSSN-GADTCQGDSGGPLVCDG-----MLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTMD 225 (225)
T ss_dssp HST---TTCCTTEEEEECTT-CCBCCTTCTTCEEEETT-----EEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHHC
T ss_pred HhC---CCCCCCEEeecCCC-CCeecCCCCCchheECC-----EEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHhC
Confidence 432 35789999998654 57999999999999843 799999999 679888899999999999999999874
No 58
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=100.00 E-value=3.2e-50 Score=368.61 Aligned_cols=220 Identities=36% Similarity=0.716 Sum_probs=190.1
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|. .+.++|+||||+++||||||||+.+ .+.|++|..+........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~-~~~~~C~GtLI~~~~VLTAAhC~~~----~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~ 75 (223)
T 4i8h_A 1 IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKS----GIQVRLGEDNINVVEGNEQFISASKSIVHPS 75 (223)
T ss_dssp CBSCEECCTTSSTTEEEEE-SSSEEEEEEECSSSEEEECGGGCCS----SCEEEESCSSTTSCCSCCEEEEEEEEEECTT
T ss_pred CCCCEECCCCCCCeEEEec-CCCcEEEEEEEcCCEEEecHHhCCC----CcEEEEccccccccCCCcEEEEEeEEEECcC
Confidence 7899999999999999997 5568899999999999999999964 45788999877655545555555554 5699
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCC-CCccceeEEEeeeechhhhccccC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG-RPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
|+..+..||||||||++|+.|+++++|||||.. ....+..++++|||.+...+ ..+..|+++.+++++.++|+..+
T Consensus 76 y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~- 152 (223)
T 4i8h_A 76 YNSNTLNNDIMLIKLKSAASLNSRVASISLPTS--CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAY- 152 (223)
T ss_dssp CCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSS--CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHS-
T ss_pred CCCCCCcCCEEEEEECCcCcCCCceeceECCCC--CCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhh-
Confidence 999999999999999999999999999999974 35679999999999887644 45678999999999999998543
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
...++++||||+...++.+.|+|||||||++.. +|+||+|||.+|+..+.|++||||+.|.+||++++++
T Consensus 153 --~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~~ 222 (223)
T 4i8h_A 153 --PGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSG-----KLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIAS 222 (223)
T ss_dssp --TTTCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred --CCCCCCCeEeccCCCCCCccCCCCCCCcEEECC-----EEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 245789999998777778999999999999954 7999999999999888999999999999999999875
No 59
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=100.00 E-value=1.1e-50 Score=375.23 Aligned_cols=222 Identities=29% Similarity=0.515 Sum_probs=189.2
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|+..+.++|+||||+++||||||||+. ..+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~ 76 (237)
T 1gvz_A 1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMS----DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQ 76 (237)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC----SSCEEEESCSBTTSCCTTCEEECEEEEEECTT
T ss_pred CCCCEECCCCCCCeEEEEeeCCceEEEeEEeeCCEEEEcHHhCC----CCCeEEEeecccccCCCCceEEEeeeEecCCc
Confidence 78999999999999999988888999999999999999999995 346789999887655444555555554 5699
Q ss_pred CCCCCC-----------CCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCC-CCCCCccceeEEEeee
Q psy6528 149 FTFSNF-----------DNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLE-ESGRPACIIRDVEVPI 216 (421)
Q Consensus 149 y~~~~~-----------~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~-~~~~~~~~L~~~~~~v 216 (421)
|+.... .||||||+|++|+.|+++++|||||.. ....+..|+++|||.+. ..+..+..|+++.+++
T Consensus 77 y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~ 154 (237)
T 1gvz_A 77 FDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQ--EPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRL 154 (237)
T ss_dssp SCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSS--CCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEE
T ss_pred cCcccccccccccccccCCceEEEEeCCCcccCCcEeeeECCCC--CCCCCCEEEEECCCcccCCCCCCCCccEEEEEeE
Confidence 987666 899999999999999999999999974 34568999999999874 3455678899999999
Q ss_pred echhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC-CCCCCCCCeEEEEeceeh
Q psy6528 217 LSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA-GCGRAGYPGVYTRITRYV 295 (421)
Q Consensus 217 ~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~-~c~~~~~p~vyt~V~~y~ 295 (421)
++.++|++.+ ...+++.||||+...++.++|+|||||||+++. +|+||+|||. .|+..+.|++||||+.|.
T Consensus 155 ~~~~~C~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~~C~~~~~p~vyt~V~~~~ 226 (237)
T 1gvz_A 155 QSNEKCARAY---PEKMTEFVLCATHRDDSGSICLGDSGGALICDG-----VFQGITSWGYSECADFNDNFVFTKVMPHK 226 (237)
T ss_dssp ECGGGGCSSC---GGGCCTTEEEEECSSTTCEECGGGTTCEEEETT-----EEEEEECCCSSSCEETTTSCCEEESGGGH
T ss_pred eChhHhhhhh---hhcCCCceEEEeeCCCCCccCCCCccCcEeeCC-----EEEEEEEeCCCCCCCCCCCcEEEEHHHHH
Confidence 9999998543 245789999999766667899999999999843 7999999998 898778899999999999
Q ss_pred hhhhhhcccc
Q psy6528 296 EWIKEKSKEG 305 (421)
Q Consensus 296 ~WI~~~~~~~ 305 (421)
+||+++++++
T Consensus 227 ~WI~~~~~~~ 236 (237)
T 1gvz_A 227 KWIKETIEKN 236 (237)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 9999998753
No 60
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=100.00 E-value=1.7e-50 Score=392.50 Aligned_cols=241 Identities=33% Similarity=0.675 Sum_probs=189.4
Q ss_pred CCCCccCCCCCCCC----CCccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeee
Q psy6528 53 DYPMCDCSCGETND----ATRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYD 128 (421)
Q Consensus 53 ~~~~~~~~cg~~~~----~~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~ 128 (421)
..+.|...||.... ..||+||++|.+++|||+|+|.. ++||||||+++||||||||+.+... ..|++|.++
T Consensus 62 ~~~~c~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~---~~CgGsLIs~~~VLTAAHC~~~~~~--~~v~~G~~~ 136 (333)
T 1elv_A 62 ELPKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDN---PWAGGALINEYWVLTAAHVVEGNRE--PTMYVGSTS 136 (333)
T ss_dssp SCCCEEECCSCCSSCC-----CBTCEECCGGGSTTEEEEET---TEEEEEEEETTEEEECHHHHTTCSS--CCEECSCSB
T ss_pred ccccccCCcCCCCCcccccceeecCcccCCCCcCeEEEecC---CceeEEEecCCEEEehhheeCCCCC--CeEEEeeee
Confidence 56788889998653 47999999999999999999942 3799999999999999999975432 367888876
Q ss_pred ccCCCCCCceeE----EEEEEcCCCCC-------CCCCCceEEEEECCCcccCCCccccccCCCCCC--CCCCCcEEEEe
Q psy6528 129 RCDTSSKPESRF----VIRAIVGDFTF-------SNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNN--TYEDETGVVMG 195 (421)
Q Consensus 129 ~~~~~~~~~~~~----v~~~i~p~y~~-------~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~--~~~~~~~~v~G 195 (421)
.... ..+... ...++||+|+. ....||||||||++|+.|+++|+|||||..... ...+..++++|
T Consensus 137 ~~~~--~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~G 214 (333)
T 1elv_A 137 VQTS--RLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISG 214 (333)
T ss_dssp CC---------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEE
T ss_pred cccC--ccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEE
Confidence 6221 122222 33456799984 567899999999999999999999999975322 34588999999
Q ss_pred cccCCCCCCCccceeEEEeeeechhhhccccCCC------CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEec-CC-ce
Q psy6528 196 WGTLEESGRPACIIRDVEVPILSNQYCRTSTNYS------STRISDNMMCAGYPEGMKDSCQGDSGGPMVFERE-DS-RY 267 (421)
Q Consensus 196 wG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~------~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~-~~-~~ 267 (421)
||.+... ..+..|+++.+++++.++|++.+... ...++++||||+... ++++|+|||||||++... ++ +|
T Consensus 215 WG~t~~~-~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~-~~~~C~GDSGGPL~~~~~~~~~~~ 292 (333)
T 1elv_A 215 WGRTEKR-DRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEK-GMDSCKGDSGGAFAVQDPNDKTKF 292 (333)
T ss_dssp SCCCSSC-SSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEEEEECST-TCBCCTTCTTCEEEEECSSCTTCE
T ss_pred CcCcCCC-CcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeECccCCC-CCCcCcCcCCCceEEEECCCCcEE
Confidence 9998654 45678999999999999998543211 125789999998655 689999999999999752 34 89
Q ss_pred EEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 268 EQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 268 ~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
+|+||+|||.+|+. |++||||+.|++||+++|++.
T Consensus 293 ~l~GIvS~g~~C~~---~~vyt~V~~y~~WI~~~~~~~ 327 (333)
T 1elv_A 293 YAAGLVSWGPQCGT---YGLYTRVKNYVDWIMKTMQEN 327 (333)
T ss_dssp EEEEEEEECSSTTS---EEEEEEGGGGHHHHHHHHHHT
T ss_pred EEEEEEeeCCCCCC---CcEEeEHHHHHHHHHHHHhcc
Confidence 99999999999974 899999999999999998754
No 61
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=100.00 E-value=2e-50 Score=372.61 Aligned_cols=227 Identities=23% Similarity=0.418 Sum_probs=195.3
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDF 149 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y 149 (421)
|+||++|.+++|||+|+|...+.++|+||||+++||||||||+.+.....+.|++|..+.... .+...+.+++.++|
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~---~~~~~v~~i~~h~y 77 (235)
T 3h7t_A 1 IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYRTTK---GTSVMAKKIYIVRY 77 (235)
T ss_dssp CBTCEECCTTTSTTEEEEEETTSCCEEEEESSSSEEEECHHHHTTCCGGGEEEEESCSBSSSS---SEEEEEEEEEECSC
T ss_pred CCCCEECCCCCCCcEEEEecCCCceEeEEEeeCCEEEECHHHCCCCCCCeeEEEcCccccccC---CceeeeeeEEeeec
Confidence 789999999999999999998889999999999999999999987667788999999876532 24445555544499
Q ss_pred CCCCCCCceEEEEECCCcccCC-CccccccCCCCCCCCCCCcEEEEecccCCCCC-CCccceeEEEeeeechhhhccccC
Q psy6528 150 TFSNFDNDIALLRLNDRVPIVD-IIKPVCLPTVLNNTYEDETGVVMGWGTLEESG-RPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 150 ~~~~~~~DIALlkL~~pv~~s~-~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
+.....||||||+|++|+.|++ .++|||||........+..|+++|||.+...+ ..+..|+++.+++++.++|+..+.
T Consensus 78 ~~~~~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~ 157 (235)
T 3h7t_A 78 HPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYK 157 (235)
T ss_dssp BTTTTBTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHH
T ss_pred CCCCCCCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhh
Confidence 9888999999999999999999 99999999865446779999999999987665 668889999999999999986532
Q ss_pred CC--CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 228 YS--STRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 228 ~~--~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
.. ...+.++||||+...++.+.|+|||||||++++ .|+||+|||.+|+. +.|++||||+.|.+||++++++.
T Consensus 158 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~C~~-~~p~vyt~v~~~~~WI~~~i~~~ 231 (235)
T 3h7t_A 158 QIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNG-----TLVGVASYISSMPS-EFPSVFLRVGYYVLDIKDIISGK 231 (235)
T ss_dssp TTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEETT-----EEEEEECCCTTCCT-TSCEEEEEGGGGHHHHHHHHTTC
T ss_pred hcccCccccCCeEecCCCCCCCccccCCCCCceeeCC-----eEEEEEEecCCCCC-CCCceEEEHHHHHHHHHHHHhCC
Confidence 21 124789999999877678999999999999943 59999999999987 88999999999999999999864
No 62
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=100.00 E-value=6.6e-50 Score=367.45 Aligned_cols=222 Identities=30% Similarity=0.553 Sum_probs=191.4
Q ss_pred cccCeeCCCCCCceEEEEeec---C-eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF---N-RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA- 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~---~-~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~- 144 (421)
|+||+++.+++|||+|+|.+. + .++|+||||+++||||||||+. ..+.|++|.++........+...+.++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~ 76 (227)
T 3fzz_A 1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKG----RSMTVTLGAHNIKAKEETQQIIPVAKAI 76 (227)
T ss_dssp CBTCEECCTTSSTTEEEEEEECSSSCEEEEEEEEEETTEEEECTTCCC----EEEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred CCCCEECCCCCcCCEEEEEEEeCCCceeEEEEEEEeCCEEEECcccCC----CCcEEEEcccccCCCCCCceEEEEEEEE
Confidence 789999999999999999763 3 6899999999999999999984 357899999887666555555555555
Q ss_pred EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcc
Q psy6528 145 IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 145 i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
+||+|+.....||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.+.|+.
T Consensus 77 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 156 (227)
T 3fzz_A 77 PHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCES 156 (227)
T ss_dssp ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHH
T ss_pred ECcCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhh
Confidence 46999999999999999999999999999999999865555679999999999988777778899999999999999985
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
.+. .....+.|+|++...+..+.|+|||||||++.. +|+||+|||..|+.. |++||||++|.+||+++|++
T Consensus 157 ~~~--~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~-----~l~Gi~S~g~~c~~~--p~vyt~V~~~~~WI~~~i~~ 227 (227)
T 3fzz_A 157 QFQ--SSYNRANEICVGDSKIKGASFEEDSGGPLVCKR-----AAAGIVSYGQTDGSA--PQVFTRVLSFVSWIKKTMKH 227 (227)
T ss_dssp HHT--TTCCTTTEEEECCCSSCBCCTTTTTTCEEEETT-----EEEEEEEECCTTCSS--SEEEEEGGGTHHHHHHHHTC
T ss_pred hhc--cccCCCceEEEeCCCCCCcccccCCccceEEec-----CCcEEEEECCCCCCC--CeEEEEhHHhHHHHHHHHhC
Confidence 432 233578999999777778999999999999954 899999999998754 99999999999999999864
No 63
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=100.00 E-value=4.3e-50 Score=368.07 Aligned_cols=220 Identities=33% Similarity=0.618 Sum_probs=185.2
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEE-EEcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIR-AIVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~-~i~p~ 148 (421)
|+||++|.+++|||+|+|+....++|+||||+++||||||||+. ..+.|++|..+... ...+...+.+ ++||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~--~~~~~~~v~~~~~Hp~ 74 (224)
T 2qxi_A 1 IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKM----NEYTVHLGSDTLGD--RRAQRIKASKSFRHPG 74 (224)
T ss_dssp CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCC----SCEEEEESCSBTTC--TTSEEEEECEEEECTT
T ss_pred CCCCeECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEhHHcCC----CCcEEEEeeeecCC--CccEEEEEEEEEECCC
Confidence 78999999999999999965444599999999999999999984 35689999877642 2233444444 45699
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCC-CCCCccceeEEEeeeechhhhccccC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEE-SGRPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~-~~~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
|+.....||||||||++|+.|+++++|||||.. ....+..|+++|||.+.. ....+..|+++.+++++.++|++.+.
T Consensus 75 y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 152 (224)
T 2qxi_A 75 YSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSR--CEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYK 152 (224)
T ss_dssp CCTTTCTTCCEEEECSSCCCCBTTBCCCCCCSS--CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHG
T ss_pred CCCCCCcCcEEEEEeCCCCcCCCceeeEECCCC--CCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhc
Confidence 999889999999999999999999999999974 245789999999998853 33557789999999999999985432
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
..+.+.||||+..+++.++|+|||||||+++. +|+||+||| ..|+..+.|++||||+.|.+||+++++++
T Consensus 153 ---~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~~ 223 (224)
T 2qxi_A 153 ---DLLENSMLCAGIPDSKKNACNGDSGGPLVCRG-----TLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMKKH 223 (224)
T ss_dssp ---GGCCTTEEEEECTTCCCBCCTTCTTCEEEETT-----EEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHHHT
T ss_pred ---CcCCCCeEEecCCCCCCccCCCCccccEEECC-----EEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHhcc
Confidence 34788999999766678999999999999943 799999999 68988889999999999999999998753
No 64
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=100.00 E-value=7.2e-50 Score=369.05 Aligned_cols=222 Identities=24% Similarity=0.503 Sum_probs=184.7
Q ss_pred cccCeeCCCCCCceEEEEeec-CeeEEEEEEEeCCEEEEccccccCc--ceeeEEEEEeeeeccCC--CCCCceeEEEEE
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF-NRFYCGGTLINDRYVLTAAHCVKGR--LWFLIKATFGEYDRCDT--SSKPESRFVIRA 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~-~~~~CgGtLIs~~~VLTAAhC~~~~--~~~~~~v~~G~~~~~~~--~~~~~~~~v~~~ 144 (421)
|+||+ +++|||+|+|... +.++|+||||+++||||||||+.+. ....+.|++|..+.... ....+...+.++
T Consensus 1 IvgG~---~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i 77 (234)
T 2asu_B 1 VVGGH---PGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKM 77 (234)
T ss_dssp CBSCE---ECCCTTEEEEECTTSCEEEEEEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEE
T ss_pred CCCcc---cCCCcceEEeeccCCCEEEEEEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEE
Confidence 68998 6789999999876 6789999999999999999999653 34567899999876544 223444555555
Q ss_pred E-cCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhc
Q psy6528 145 I-VGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCR 223 (421)
Q Consensus 145 i-~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~ 223 (421)
+ ||. .||||||+|++|+.|+++++|||||........+..|+++|||.+...+ .+..|+++.+++++.++|+
T Consensus 78 ~~hp~------~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~L~~~~~~~~~~~~C~ 150 (234)
T 2asu_B 78 VCGPS------GSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTG-NDTVLNVALLNVISNQECN 150 (234)
T ss_dssp EECST------TCCEEEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSS-CTTBCEEEEEEEECHHHHH
T ss_pred ecCCC------CCCeEEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCC-CCccceEEEeeEEcHHHcc
Confidence 4 454 5899999999999999999999999864445678999999999986544 4678999999999999998
Q ss_pred cccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 224 TSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 224 ~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
..+ ...+.+.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|++||||+.|.+||+++++
T Consensus 151 ~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 226 (234)
T 2asu_B 151 IKH---RGRVRESEMCTEGLLAPVGACEGDYGGPLACFT-HNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVMR 226 (234)
T ss_dssp HHT---TTCCCTTEEEECCCSSCCBCCTTCTTCEEEEEE-TTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHHC-
T ss_pred ccc---CCccCcceEeecCCCCCCeeccCCCCCceEEEE-CCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 543 245789999998766678999999999999987 7899999999999999988899999999999999999987
Q ss_pred cc
Q psy6528 304 EG 305 (421)
Q Consensus 304 ~~ 305 (421)
+.
T Consensus 227 ~~ 228 (234)
T 2asu_B 227 LG 228 (234)
T ss_dssp --
T ss_pred cc
Confidence 53
No 65
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=100.00 E-value=8e-50 Score=366.29 Aligned_cols=219 Identities=28% Similarity=0.512 Sum_probs=184.6
Q ss_pred cccCeeCCCCCCceEEEEeec--C-eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-E
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF--N-RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-I 145 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~--~-~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i 145 (421)
|+||+++.+++|||+|+|... + .++|+||||+++||||||||+.+ .+.|++|.++........+...+.++ +
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 76 (224)
T 1cgh_A 1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGS----NINVTLGAHNIQRRENTQQHITARRAIR 76 (224)
T ss_dssp CBSCEECCTTSSTTEEEEEESTTTTSCEEEEEEEETTEEEECGGGCCS----SEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred CCCCEECCCCCCCcEEEEEEECCCCCeEEEEEEeeCCEEEEhHHhCCC----CCEEEEeecccCCCCCccEEEEEEEEEc
Confidence 789999999999999999873 3 48999999999999999999964 46899999887654444555556555 4
Q ss_pred cCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccc
Q psy6528 146 VGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 146 ~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
||+|+.....||||||||++|+.|+++++|||||........+..|+++|||.+. .+..+..|+++.+++++.++|+..
T Consensus 77 Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~-~~~~~~~l~~~~~~i~~~~~C~~~ 155 (224)
T 1cgh_A 77 HPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVS-MRRGTDTLREVQLRVQRDRQCLRI 155 (224)
T ss_dssp CTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSS-SSCCCSBCEEEEEEBCCHHHHHHH
T ss_pred CCCCCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCC-CCCCCCcceEEEEEeeCHHHHHHH
Confidence 6999998899999999999999999999999999864445678999999999987 445577899999999999999854
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
+ .....+.||||+...++.+.|+|||||||++++ +|+||+|||. |. ...|++||||+.|.+||+++++
T Consensus 156 ~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~-~~-~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 156 F---GSYDPRRQICVGDRRERKAAFKGDSGGPLLCNN-----VAHGIVSYGK-SS-GVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp C---TTCCTTTEEEECCTTSCCBCCTTCTTCEEEETT-----EEEEEEEECC-TT-CCSCEEEEEGGGGHHHHHHHHH
T ss_pred h---CcCCCcceEeeccCCCCCeEeeCCCccceEEcc-----EEEEEEEEEC-CC-CCCCeEEEEHHHhHHHHHHHhh
Confidence 3 233456699998766668999999999999943 8999999998 43 3569999999999999999875
No 66
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=100.00 E-value=6.4e-51 Score=377.53 Aligned_cols=224 Identities=33% Similarity=0.644 Sum_probs=163.5
Q ss_pred CccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-Ec
Q psy6528 68 TRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IV 146 (421)
Q Consensus 68 ~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~ 146 (421)
.||+||++|..++|||+|+|+..+.++|+||||+++||||||||+.+ .+.|++|..+........+...+.++ +|
T Consensus 2 arIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~~~~H 77 (240)
T 1sgf_A 2 APPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYND----KYQVWLGKNNFLEDEPSDQHRLVSKAIPH 77 (240)
T ss_dssp -----------CCCTTEEEEECTTSCCEEEEECSSSEEEECGGGCCS----CCEEEECC----C-CTTCEEEEEEEEEEC
T ss_pred CcccCCeECCCCCcCCEEEEEeCCCeEEEEEEecCCEEEECHHhCCC----CceEEeCCcccccCCCCceEEEEEEEEcC
Confidence 58999999999999999999544678999999999999999999963 35788998876544444455555555 46
Q ss_pred CCCCCC-----------CCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCC-CCCccceeEEEe
Q psy6528 147 GDFTFS-----------NFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEES-GRPACIIRDVEV 214 (421)
Q Consensus 147 p~y~~~-----------~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~-~~~~~~L~~~~~ 214 (421)
|+|+.. ...||||||+|++|+.|+++|+|||||.. ....+..|+++|||.+... ...+..|+++.+
T Consensus 78 p~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~ 155 (240)
T 1sgf_A 78 PDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTE--EPKLGSTCLASGWGSTTPIKFKYPDDLQCVNL 155 (240)
T ss_dssp TTSCGGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCS--CCCTTCEEEEC-------C---------CEEE
T ss_pred CCCcccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCCC--CCCCCCEEEEEecCCCCCCCCCCCccccEEee
Confidence 999865 67899999999999999999999999974 3456899999999988654 345678999999
Q ss_pred eeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEece
Q psy6528 215 PILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITR 293 (421)
Q Consensus 215 ~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~ 293 (421)
++++.++|+..+ ...+++.||||+...++.++|+|||||||+++. +|+||+||| ..|+..+.|++||||+.
T Consensus 156 ~~~~~~~C~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~~C~~~~~p~vyt~V~~ 227 (240)
T 1sgf_A 156 KLLPNEDCDKAH---EMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDG-----ILQGITSWGPEPCGEPTEPSVYTKLIK 227 (240)
T ss_dssp EEECTHHHHTTC---SSBCCTTEEEEEECSSSEEECCCCTTCEEEETT-----EEEEEECCCCSSCCCSSCCEEEEESGG
T ss_pred eEeCHHHhhhhh---CCCcCCCeEeEccCCCCCCCCCCCCcCcEEEcc-----EEEEEEEECCCCCCCCCCCeEEEeHHH
Confidence 999999998543 245789999999766667899999999999942 799999999 67988889999999999
Q ss_pred ehhhhhhhcccc
Q psy6528 294 YVEWIKEKSKEG 305 (421)
Q Consensus 294 y~~WI~~~~~~~ 305 (421)
|++||+++++++
T Consensus 228 ~~~WI~~~~~~~ 239 (240)
T 1sgf_A 228 FSSWIRETMANN 239 (240)
T ss_dssp GHHHHHHHHHSC
T ss_pred HHHHHHHHHhcC
Confidence 999999998753
No 67
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=100.00 E-value=8.8e-50 Score=366.25 Aligned_cols=218 Identities=27% Similarity=0.522 Sum_probs=187.0
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCC-ceeEEEEEEcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKP-ESRFVIRAIVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~-~~~~v~~~i~p~ 148 (421)
|+||+++.+++|||+|+|...+.++|+||||+++||||||||+.+.....+.|++|.++........ +...+.++++++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~ 80 (225)
T 1a7s_A 1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENG 80 (225)
T ss_dssp CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSS
T ss_pred CCCCEECCCCCCCcEEEEecCCCcEEEEEEeeCCEEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEeccc
Confidence 7899999999999999999888899999999999999999999776566789999998776544333 455566666568
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNY 228 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~ 228 (421)
|+.....||||||||++|+.|+++++|||||........+..++++|||.+...+..+..|+++.+++++.++|+.
T Consensus 81 y~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~---- 156 (225)
T 1a7s_A 81 YDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP---- 156 (225)
T ss_dssp CBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT----
T ss_pred ccCCCCcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhcc----
Confidence 9888889999999999999999999999999864444678999999999988777778899999999999999972
Q ss_pred CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 229 SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 229 ~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
+|+||+...++.++|+|||||||++.+ +|+||+||| ..|+.. |++||||+.|.+||++++++.
T Consensus 157 -------~~~Ca~~~~~~~~~C~GDSGgPl~~~g-----~l~Gi~S~g~~~C~~~--p~vyt~V~~~~~WI~~~~~~~ 220 (225)
T 1a7s_A 157 -------NNVCTGVLTRRGGICNGDGGTPLVCEG-----LAHGVASFSLGPCGRG--PDFFTRVALFRDWIDGVLNNP 220 (225)
T ss_dssp -------TEEEEECSSSSCBCCTTCTTCEEEETT-----EEEEEEEEECSSTTSS--CEEEEEGGGGHHHHHHHHHSC
T ss_pred -------CceEEeccCCCCCcccCCCcchheeCC-----EEEEEEEEccCCcCCC--CcEEEEhHHhHHHHHHHhcCC
Confidence 699999776668999999999999962 899999999 678764 999999999999999999764
No 68
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=100.00 E-value=9.4e-50 Score=368.98 Aligned_cols=225 Identities=29% Similarity=0.579 Sum_probs=190.6
Q ss_pred cccCeeCCCCCCceEEEEeec--CeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCcee-EEEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF--NRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESR-FVIRAI- 145 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~--~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~-~v~~~i- 145 (421)
|+||+++.+++|||+|+|... +.++|+||||+++||||||||+.. .+.|++|...........+.. .+..++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~----~~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (238)
T 4e7n_A 1 IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCDRK----NFRIKLGMHSKKVPNEDEQTRVPKEKFFC 76 (238)
T ss_dssp CBSCEECCTTSCTTEEEEECTTTCCEEEEEEECSSSEEEECGGGCCS----SCEEEESCSCSSSCCTTCEEECEEEEECS
T ss_pred CCCCeeCCCCCcCcEEEEEECCCCCEEEEEEEecCCEEEEhHHcCCC----CCeEEeceeeccccCCCceeEeeeeeEEc
Confidence 789999999999999999876 678999999999999999999863 357888987765544444433 344444
Q ss_pred cCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCC-CCccceeEEEeeeechhhhcc
Q psy6528 146 VGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG-RPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 146 ~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~v~~~~~C~~ 224 (421)
||.|+.....||||||||++|+.|+++++|||||.. ....+..|+++|||.+.... ..+..|+++.+++++.++|+.
T Consensus 77 h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~ 154 (238)
T 4e7n_A 77 LSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSS--PPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRA 154 (238)
T ss_dssp STTCCCCSSSCCCEEEEESSCCCCBTTBCCCCCCSS--CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTT
T ss_pred CCCCCCCCCCCcEEEEEeCCCccCCCceeeeeCCCC--CCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhh
Confidence 699999899999999999999999999999999974 34458999999999886543 567789999999999999986
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCC-CCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAG-CGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
.+......+++.||||+...++.++|+|||||||++.. .|+||+|||.. |+..+.|++||||+.|.+||+++++
T Consensus 155 ~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 229 (238)
T 4e7n_A 155 PYPEFELPATSRTLCAGILEGGKDTCKGDSGGPLICNG-----QFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIA 229 (238)
T ss_dssp TCGGGCCCSCCSEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHT
T ss_pred hcccccCCCCCCeEEeCCCCCCCccCCCCCCcceEECC-----EEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHh
Confidence 54332345789999999777778999999999999954 69999999987 9888899999999999999999998
Q ss_pred cc
Q psy6528 304 EG 305 (421)
Q Consensus 304 ~~ 305 (421)
+.
T Consensus 230 ~~ 231 (238)
T 4e7n_A 230 GN 231 (238)
T ss_dssp TC
T ss_pred cC
Confidence 64
No 69
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=100.00 E-value=1e-49 Score=366.00 Aligned_cols=220 Identities=28% Similarity=0.505 Sum_probs=186.9
Q ss_pred cccCeeCCCCCCceEEEEeecC----eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFN----RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA- 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~----~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~- 144 (421)
|+||+++.+++|||+|+|.... .++|+||||+++||||||||+. ..+.|++|.++........+...+.++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~ 76 (226)
T 4ag1_A 1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLGAHNITEEEDTWQKLEVIKQF 76 (226)
T ss_dssp CBSCEECCTTSSTTEEEEEEECSSSSCEEEEEEEEETTEEEECGGGCC----SEEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred CCCCEECCCCCCCcEEEEEEEcCCCcccEEEEEEEeCCEEEECcccCC----CCeEEEeCCcccCCCCCcceEEEEEEEE
Confidence 7899999999999999998643 6899999999999999999984 357899999887665555555555554
Q ss_pred EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcc
Q psy6528 145 IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 145 i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
+||+|+.....||||||||++|+.|++.++|||||........+..|+++|||.+......+..|+++.+++++.++|+.
T Consensus 77 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 156 (226)
T 4ag1_A 77 RHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSH 156 (226)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTT
T ss_pred eCCCCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHccc
Confidence 46999999999999999999999999999999999865555679999999999987776678899999999999999983
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
.. ....+.||||+...++.++|+|||||||++.. +|+||+|||..|+.. |++||||+.|.+||++++++
T Consensus 157 ~~----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~--p~vyt~v~~~~~WI~~~i~~ 225 (226)
T 4ag1_A 157 FR----DFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAG-----VAQGIVSYGRSDAKP--PAVFTRISHYRPWINQILQA 225 (226)
T ss_dssp ST----TCCTTTEEEESCTTSCCBCCTTCTTCEEEETT-----EEEEEEEECBTTCCS--CEEEEEHHHHHHHHHHHHHH
T ss_pred cc----CcCccceEeeccCCCCCcCccCCCCCceEEcC-----EEEEEEEECCCCCCC--CCEEEEhHHHHHHHHHHHhc
Confidence 21 33578899999777778999999999999943 899999999998764 99999999999999999875
No 70
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=100.00 E-value=5.4e-50 Score=370.12 Aligned_cols=220 Identities=33% Similarity=0.602 Sum_probs=186.3
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|.. + ++|+||||+++||||||||+. ..+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~-~-~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 74 (235)
T 1ton_A 1 IVGGYKCEKNSQPWQVAVIN-E-YLCGGVLIDPSWVITAAHCYS----NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPD 74 (235)
T ss_dssp CBSCEECCTTSCTTEEEEES-S-SEEEEEEEETTEEEECGGGCC----SCCEEEESCSBTTSCCTTCEEECEEEEEECTT
T ss_pred CCCCEECCCCCcCcEEEEcc-C-CeEEEEEecCCEEEEcHHhCC----CCcEEEeCcccccCCCCcceEEEEEEEEeCCC
Confidence 78999999999999999976 3 899999999999999999994 346789999877544444444555554 5699
Q ss_pred CCC-----------CCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCC-CCCccceeEEEeee
Q psy6528 149 FTF-----------SNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEES-GRPACIIRDVEVPI 216 (421)
Q Consensus 149 y~~-----------~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~-~~~~~~L~~~~~~v 216 (421)
|+. ....||||||||++|+.|+++++|||||.. ....+..|+++|||.+... ...+..|+++.+++
T Consensus 75 y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~ 152 (235)
T 1ton_A 75 YIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTK--EPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHL 152 (235)
T ss_dssp CCCC--------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCS--CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEE
T ss_pred CcccccccccccccCCCcCCEEEEEcCCccccCCcceeeeCCCC--CCCCCCEEEEEecCCCCCCCCccCccceEEEEEE
Confidence 987 677899999999999999999999999974 3556899999999998654 44577899999999
Q ss_pred echhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceeh
Q psy6528 217 LSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYV 295 (421)
Q Consensus 217 ~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~ 295 (421)
++.++|+..+. ..+++.||||+..+++.++|+|||||||+++. +|+||+||| ..|+..+.|++||||+.|+
T Consensus 153 ~~~~~C~~~~~---~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~ 224 (235)
T 1ton_A 153 LSNEKCIETYK---DNVTDVMLCAGEMEGGKDTCAGDSGGPLICDG-----VLQGITSGGATPCAKPKTPAIYAKLIKFT 224 (235)
T ss_dssp ECGGGCGGGGS---TTGGGGEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEECCCCSSCSCTTCCEEEEEGGGGH
T ss_pred eCHHHHHHHhc---CcCCCCeEeeccCCCCCcCCCCCCccccEECC-----EEEEEEeeCCCCCCCCCCCeEEEEHHHHH
Confidence 99999985432 35788999999766668999999999999942 799999999 6799888999999999999
Q ss_pred hhhhhhcccc
Q psy6528 296 EWIKEKSKEG 305 (421)
Q Consensus 296 ~WI~~~~~~~ 305 (421)
+||+++++++
T Consensus 225 ~WI~~~~~~~ 234 (235)
T 1ton_A 225 SWIKKVMKEN 234 (235)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHccC
Confidence 9999998753
No 71
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=100.00 E-value=2e-50 Score=374.58 Aligned_cols=229 Identities=34% Similarity=0.597 Sum_probs=183.7
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCc-----ceeeEEEEEeeeeccCCCCCCceeEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGR-----LWFLIKATFGEYDRCDTSSKPESRFVIR- 143 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~-----~~~~~~v~~G~~~~~~~~~~~~~~~v~~- 143 (421)
|+||++|.+++|||+|+|.. .+.|+||||+++||||||||+... ....+.|++|..+...... .+...+.+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~--~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~-~~~~~v~~i 77 (242)
T 2qy0_B 1 IIGGQKAKMGNFPWQVFTNI--HGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMK-LGNHPIRRV 77 (242)
T ss_dssp CBSCEECCTTSSTTEEEEES--SSEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHH-HCCCCEEEE
T ss_pred CCCCEECCCCCCCcEEEEcc--CCCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEEeecccccccc-ccceeEEEE
Confidence 78999999999999999975 357999999999999999999632 3345678999876532111 11223444
Q ss_pred EEcCCCCCC---CCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechh
Q psy6528 144 AIVGDFTFS---NFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQ 220 (421)
Q Consensus 144 ~i~p~y~~~---~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~ 220 (421)
++||+|+.. ...||||||||++|+.|+++++|||||........+..++++|||.+... .+..|+++.+++++.+
T Consensus 78 ~~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~--~~~~L~~~~~~~~~~~ 155 (242)
T 2qy0_B 78 SVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK--IAHDLRFVRLPVANPQ 155 (242)
T ss_dssp EECTTCCTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSS--CCSBCEEEEEEBCCHH
T ss_pred EECCCCccCcCCCCCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCc--CCccceEEEEEEeCHH
Confidence 457999865 67899999999999999999999999975333456889999999987654 5678999999999999
Q ss_pred hhccccCC--CCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEe-cCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhh
Q psy6528 221 YCRTSTNY--SSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFER-EDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEW 297 (421)
Q Consensus 221 ~C~~~~~~--~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~-~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~W 297 (421)
+|+..+.. ....++++||||+...++.++|+|||||||++.+ .+++|+|+||+|||.+|+. .|++||||+.|.+|
T Consensus 156 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~--~~~vyt~V~~y~~W 233 (242)
T 2qy0_B 156 ACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GYGFYTKVLNYVDW 233 (242)
T ss_dssp HHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSS--SCEEEEEGGGGHHH
T ss_pred HHHHHhccccccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCC--CCcEEEEHHHHHHH
Confidence 99853211 1234788999999766668999999999999963 4789999999999999985 48999999999999
Q ss_pred hhhhcccc
Q psy6528 298 IKEKSKEG 305 (421)
Q Consensus 298 I~~~~~~~ 305 (421)
|+++++++
T Consensus 234 I~~~~~~~ 241 (242)
T 2qy0_B 234 IKKEMEEE 241 (242)
T ss_dssp HHHHTTC-
T ss_pred HHHHhhcc
Confidence 99998753
No 72
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=100.00 E-value=1.9e-50 Score=374.36 Aligned_cols=228 Identities=26% Similarity=0.514 Sum_probs=182.1
Q ss_pred cCeeCCCCCCceEEEEee--cC--eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCC--ceeEE-EEE
Q psy6528 72 GGQPTEVNQYPWMVRLSY--FN--RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKP--ESRFV-IRA 144 (421)
Q Consensus 72 gG~~a~~~~~Pw~v~l~~--~~--~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~--~~~~v-~~~ 144 (421)
||++|.+++|||+|+|.+ .+ .++|+||||+++||||||||+.+. ..+.|++|.++........ +...+ ..+
T Consensus 1 gG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAhC~~~~--~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~ 78 (240)
T 1fon_A 1 NGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTS--RTYQVVLGEYDRSVLEGSEQVIPINAGDLF 78 (240)
T ss_dssp --------CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCTT--SCEEEEEEEEETTEEEEEEEEEEECTTSEE
T ss_pred CCccCCcCCcccEEEEEEecCCcEeeEEEEEEeeCCEEEECHHHCCCC--CceEEEeeeeeccccCCCceeEeeeeeEEE
Confidence 789999999999999987 33 489999999999999999999653 4578999998764322111 22222 235
Q ss_pred EcCCCCCCCCC--CceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhh
Q psy6528 145 IVGDFTFSNFD--NDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYC 222 (421)
Q Consensus 145 i~p~y~~~~~~--~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C 222 (421)
+||+|+..... ||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|
T Consensus 79 ~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C 158 (240)
T 1fon_A 79 VHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHC 158 (240)
T ss_dssp ECTTCCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHH
T ss_pred ECCCCcCCCccCCCCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHh
Confidence 67999988777 9999999999999999999999998644456788999999999877666778999999999999999
Q ss_pred ccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC--CCCCCCCCeEEEEeceehhhhhh
Q psy6528 223 RTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA--GCGRAGYPGVYTRITRYVEWIKE 300 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~--~c~~~~~p~vyt~V~~y~~WI~~ 300 (421)
++...+ ...+++.||||+. .+ .++|+|||||||++...+++|+|+||+|||. +|+..+.|++||||+.|.+||++
T Consensus 159 ~~~~~~-~~~~~~~~~Ca~~-~~-~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 235 (240)
T 1fon_A 159 SQWDWW-GITVKKTMVCAGG-DT-RSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDE 235 (240)
T ss_dssp TSTTTT-GGGCCTTEEEECC-SS-SCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHH
T ss_pred ccceec-CCccccceEeecC-CC-CcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHH
Confidence 854322 3457899999984 33 8999999999999986578999999999996 79887889999999999999999
Q ss_pred hccc
Q psy6528 301 KSKE 304 (421)
Q Consensus 301 ~~~~ 304 (421)
++++
T Consensus 236 ~~~~ 239 (240)
T 1fon_A 236 TIAS 239 (240)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9864
No 73
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=100.00 E-value=2.4e-49 Score=365.43 Aligned_cols=222 Identities=30% Similarity=0.541 Sum_probs=188.9
Q ss_pred cccCeeCCCCCCceEEEEeec--CeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCcee-EEEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF--NRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESR-FVIRAI- 145 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~--~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~-~v~~~i- 145 (421)
|+||++|.+++|||+|+|... +.++|+||||+++||||||||+.. ...|.+|..+........+.. .+..++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~----~~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (234)
T 3s9c_A 1 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDRR----NIRIKLGMHSKNIRNEDEQIRVPRGKYFC 76 (234)
T ss_dssp CBSCEECCTTSCTTEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT----TEEEEESCSSSSSCCTTCEEECEEEEECC
T ss_pred CCCCeeCCCCCCCeEEEEEECCCCcEEEeeEEeeCCEEEEchhhcCC----CceEEEeecccccccCCcceEEeeeEEEe
Confidence 789999999999999999876 578999999999999999999853 367889988766544444333 344444
Q ss_pred cCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccc
Q psy6528 146 VGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 146 ~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
||.|+.....||||||||++|+.|+++++|||||.. ....+..|+++|||.+... ..+..|+++.+++++.++|+..
T Consensus 77 h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~L~~~--~~~~~~~~~v~GwG~~~~~-~~~~~l~~~~~~~~~~~~C~~~ 153 (234)
T 3s9c_A 77 LNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSR--SRGVGSRCRIMGWGKISTT-TYPDVPHCTNIFIVKHKWCEPL 153 (234)
T ss_dssp SSCSSTTCGGGCCEEEEESSCCCCBTTBCCCBCCSS--CCCTTCEEEEEESSCSBTT-BCCSSCEEEEEEEECGGGTTTT
T ss_pred CCCCCCCCCcCceEEEEECCccccCCcccccccCCC--CCCCCCeEEEEeeCCCCCC-CCCccccccceEecCHHHhhhc
Confidence 699998889999999999999999999999999984 3445899999999988655 5677899999999999999854
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCC-CCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAG-CGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+ ....+.+.||||+...++.++|+|||||||++.. .|+||+|||.. |+..+.|++||||+.|.+||++++++
T Consensus 154 ~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~ 226 (234)
T 3s9c_A 154 Y--PWVPADSRTLCAGILKGGRDTCHGDSGGPLICNG-----EMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAG 226 (234)
T ss_dssp C--TTSCTTSSEEEEECTTSSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred c--cCCCCCcceEEeecCCCCCccCCCCCCCeEEEeC-----CcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcC
Confidence 3 2245789999999777778999999999999964 59999999986 98888999999999999999999986
Q ss_pred c
Q psy6528 305 G 305 (421)
Q Consensus 305 ~ 305 (421)
.
T Consensus 227 ~ 227 (234)
T 3s9c_A 227 N 227 (234)
T ss_dssp C
T ss_pred C
Confidence 4
No 74
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=100.00 E-value=8.4e-50 Score=373.80 Aligned_cols=232 Identities=38% Similarity=0.702 Sum_probs=190.1
Q ss_pred cccCeeCCCCCCceEEEEeec--CeeEEEEEEEeCCEEEEccccccC------cceeeEEEEEeeeeccCCCCCCc-eeE
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF--NRFYCGGTLINDRYVLTAAHCVKG------RLWFLIKATFGEYDRCDTSSKPE-SRF 140 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~--~~~~CgGtLIs~~~VLTAAhC~~~------~~~~~~~v~~G~~~~~~~~~~~~-~~~ 140 (421)
|+||++|.+++|||+|+|+.. +.++|+||||+++||||||||+.. .....+.|++|.++......... ...
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~ 80 (259)
T 3rm2_H 1 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM 80 (259)
T ss_dssp CBSCEECCTTSSTTEEEEEEETTEEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEE
T ss_pred CCCCEECCCCCcCCEEEEEECCCCceEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeE
Confidence 789999999999999999654 368999999999999999999942 23456789999987755443333 333
Q ss_pred EEEE-EcCCCC-CCCCCCceEEEEECCCcccCCCccccccCCCCCC---CCCCCcEEEEecccCCCCC------CCccce
Q psy6528 141 VIRA-IVGDFT-FSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNN---TYEDETGVVMGWGTLEESG------RPACII 209 (421)
Q Consensus 141 v~~~-i~p~y~-~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~---~~~~~~~~v~GwG~~~~~~------~~~~~L 209 (421)
+.++ +||+|+ .....||||||+|++|+.|+++++|||||..... ...+..|+++|||.+.... ..+..|
T Consensus 81 v~~i~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l 160 (259)
T 3rm2_H 81 LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL 160 (259)
T ss_dssp EEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBC
T ss_pred EEEEEECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccc
Confidence 5554 569998 4677899999999999999999999999974221 2458899999999876532 126789
Q ss_pred eEEEeeeechhhhccccCCCCCCCCCCeEEeccCC---CCCCCCcCCCCCeeEEEec-CCceEEEEEEEeCCCCCCCCCC
Q psy6528 210 RDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPE---GMKDSCQGDSGGPMVFERE-DSRYEQIGIVSWGAGCGRAGYP 285 (421)
Q Consensus 210 ~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~---~~~~~C~GDsGgPL~~~~~-~~~~~lvGI~S~g~~c~~~~~p 285 (421)
+++.+++++.+.|+..+ ...++++||||+... ...++|+|||||||++... +++|+|+||+|||.+|+..+.|
T Consensus 161 ~~~~~~~~~~~~C~~~~---~~~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p 237 (259)
T 3rm2_H 161 QVVNLPIVERPVCKDST---RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKY 237 (259)
T ss_dssp EEEEEEBCCHHHHHHTC---SSCCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCC
T ss_pred eEEEEEEeCHHHhhhhh---cccCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCC
Confidence 99999999999998543 345789999998542 2358999999999999863 7899999999999999988899
Q ss_pred eEEEEeceehhhhhhhccc
Q psy6528 286 GVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 286 ~vyt~V~~y~~WI~~~~~~ 304 (421)
++||+|+.|.+||+++|++
T Consensus 238 ~vyt~V~~~~~WI~~~i~~ 256 (259)
T 3rm2_H 238 GFYTHVFRLKKWIQKVIDQ 256 (259)
T ss_dssp EEEEETGGGHHHHHHHHHH
T ss_pred eEEEEHHHhHHHHHHHHHH
Confidence 9999999999999999875
No 75
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=100.00 E-value=1.6e-49 Score=364.10 Aligned_cols=219 Identities=29% Similarity=0.500 Sum_probs=189.1
Q ss_pred cccCeeCCCCCCceEEEEeecC----eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFN----RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA- 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~----~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~- 144 (421)
|+||+++.+++|||+|+|.... .++|+||||+++||||||||+. ..+.|++|.++........+...+.++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~----~~~~v~~g~~~~~~~~~~~~~~~v~~~~ 76 (224)
T 3rp2_A 1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKG----REITVILGAHDVRKRESTQQKIKVEKQI 76 (224)
T ss_dssp CBSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCC----SEEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred CCCCEECCCCCCCcEEEEEEecCCCcEEEEEeEEeeCCEEEEchhcCC----CCcEEEEeccccCcCCCCcEEEEEEEEE
Confidence 7899999999999999998754 6899999999999999999984 357899999887665555555555554
Q ss_pred EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcc
Q psy6528 145 IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 145 i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
+||+|+..+..||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.+++++.++|+.
T Consensus 77 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 156 (224)
T 3rp2_A 77 IHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVD 156 (224)
T ss_dssp ECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTT
T ss_pred ECCCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhcc
Confidence 56999998899999999999999999999999999865555679999999999987666667789999999999999984
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
. .....+.|+|++...+..+.|+|||||||++.. +|+||+|||..|+.. |++||||+.|.+||+++|+
T Consensus 157 ~----~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~--p~vyt~v~~y~~WI~~~i~ 224 (224)
T 3rp2_A 157 Y----RYYEYKFQVCVGSPTTLRAAFMGDSGGPLLCAG-----VAHGIVSYGHPDAKP--PAIFTRVSTYVPWINAVIN 224 (224)
T ss_dssp T----TCCCTTTEEEECCTTSCCBCCTTTTTCEEEETT-----EEEEEEEECCTTCCS--CEEEEEHHHHHHHHHHHHC
T ss_pred c----cccCcCCEEEecCCCCCCeeccCCCCCeEEEcc-----eeeEEEEECCCCCCC--CcEEEEHHHhHHHHHHHhC
Confidence 2 234578899999777778999999999999954 899999999998764 9999999999999999874
No 76
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=100.00 E-value=8.1e-50 Score=366.73 Aligned_cols=220 Identities=32% Similarity=0.606 Sum_probs=186.8
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||++|.+++|||+|+|..++.++|+||||+++||||||||+.+ ...+.|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~ 78 (226)
T 1azz_A 1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDG--AGFVDVVLGAHNIREDEATQVTIQSTDFTVHEN 78 (226)
T ss_dssp CBSCEECCTTSSTTEEEEEETTTEEEEEEEEETTEEEECHHHHTT--CSCEEEEESCSBSSSCCTTCEEEEECCEEECTT
T ss_pred CCCCEECCCCCcCCEEEEEECCcEEEEEEEecCCEEEEhHHhcCC--CCceEEEEcceEcCCCCCccEEEEEEEEEECCC
Confidence 789999999999999999987789999999999999999999965 3457899999877654434444455544 5699
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCC-CCccceeEEEeeeechhhhccccC
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG-RPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
|+.....||||||||++|+.|+++++|||||... ...+..++++|||.+...+ ..+..|+++.+++++.++|+..+.
T Consensus 79 y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~--~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~ 156 (226)
T 1azz_A 79 YNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTD--VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYG 156 (226)
T ss_dssp CBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSC--CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHS
T ss_pred CCCCCCCCceEEEEECCccccCCCcccccCCCCC--CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhC
Confidence 9988889999999999999999999999999853 3678999999999887643 567789999999999999985432
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC--CCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA--GCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~--~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
.+++.||||+. .++.++|+|||||||+++. +|+||+|||. +|. .+.|++||||+.|.+||+++++.
T Consensus 157 ----~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~~C~-~~~p~vyt~V~~~~~WI~~~~~~ 224 (226)
T 1azz_A 157 ----IVTDGNICIDS-TGGKGTCNGDSGGPLNYNG-----LTYGITSFGAAAGCE-AGYPDAFTRVTYFLDWIQTQTGI 224 (226)
T ss_dssp ----CCCTTEEEECC-TTTCBCCTTCTTCEEEETT-----EEEEEEEEEETTCTT-SCCCEEEEESGGGHHHHHHHHCC
T ss_pred ----cCCCceEeecC-CCCCccCCCCCCcceEECC-----EEEEEEEEECCCCCC-CCCCCEEEEHHHHHHHHHHHhCC
Confidence 47899999985 4557999999999999632 8999999997 676 47899999999999999999864
No 77
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=100.00 E-value=2.2e-49 Score=365.62 Aligned_cols=223 Identities=30% Similarity=0.546 Sum_probs=189.9
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCcee-EEEEEE-cC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESR-FVIRAI-VG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~-~v~~~i-~p 147 (421)
|+||+++.+++|||+|+|...+.++|+||||+++||||||||+.. ...+.+|...........+.. .+..++ ||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~----~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~ 76 (234)
T 3s69_A 1 VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCDNT----NFQMKLGVHSKKVLNEDEQTRNPKEKFICPN 76 (234)
T ss_dssp CBSCEECCTTSCTTEEEEECSSCEEEEEEEEETTEEEECGGGCCS----SCEEEESCCCSSSCCTTCEEECEEEEEECTT
T ss_pred CCCCccCCCCCCceEEEEeeCCCeEEeEEEeeCCEEEEchhhCCC----CceEEecccccccccCCcceeeceEEEECCC
Confidence 789999999999999999988889999999999999999999853 357888887765544443333 344554 69
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCC-CCccceeEEEeeeechhhhcccc
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG-RPACIIRDVEVPILSNQYCRTST 226 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~v~~~~~C~~~~ 226 (421)
.|+.....||||||||++|+.|+++++|||||.. ....+..|+++|||.+.... ..+..|+++.+++++.+.|+..+
T Consensus 77 ~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~--~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 154 (234)
T 3s69_A 77 KKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPSS--PPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGY 154 (234)
T ss_dssp CCTTCTTSSCCEEEEESSCCCCBTTBCCCCCCSS--CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHC
T ss_pred ccCCCCCcccEEEEeeCCcCCCCCcceeeecCCC--CCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhc
Confidence 9999999999999999999999999999999984 34458999999999886643 55778999999999999998543
Q ss_pred CCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCC-CCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 227 NYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAG-CGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 227 ~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
. ...+.+.||||+...++.++|+|||||||++.. .|+||+|||.. |+..+.|++||||+.|.+||++++++.
T Consensus 155 ~--~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 155 P--ELLTEYRTLCAGILEGGKDTCGGDSGGPLICNG-----QFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp T--TCCTTSCEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred c--cccCCcceEeccCCCCCCccCCCCCccceEEcC-----EEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 2 245788999999777778999999999999954 59999999976 988889999999999999999999864
No 78
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-50 Score=402.82 Aligned_cols=235 Identities=38% Similarity=0.695 Sum_probs=192.6
Q ss_pred CCccccCeeCCCCCCceEEEEeec--CeeEEEEEEEeCCEEEEccccccC------cceeeEEEEEeeeeccCCCCC-Cc
Q psy6528 67 ATRIVGGQPTEVNQYPWMVRLSYF--NRFYCGGTLINDRYVLTAAHCVKG------RLWFLIKATFGEYDRCDTSSK-PE 137 (421)
Q Consensus 67 ~~rI~gG~~a~~~~~Pw~v~l~~~--~~~~CgGtLIs~~~VLTAAhC~~~------~~~~~~~v~~G~~~~~~~~~~-~~ 137 (421)
..||+||.+|.+++|||+|+|+.. +.++||||||+++||||||||+.. .....+.|++|.++....... .+
T Consensus 163 ~~RIvgG~~a~~g~~Pw~v~l~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~ 242 (424)
T 3nxp_A 163 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEK 242 (424)
T ss_dssp SSCCCCCEECCTTSCTTEEEEEETTTTEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCE
T ss_pred CCeeECCEECCCCCCCCEEEEeecCCCCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCCcee
Confidence 469999999999999999999765 468999999999999999999842 234568899999887654332 33
Q ss_pred eeEEEEE-EcCCCC-CCCCCCceEEEEECCCcccCCCccccccCCCCCC---CCCCCcEEEEecccCCC------CCCCc
Q psy6528 138 SRFVIRA-IVGDFT-FSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNN---TYEDETGVVMGWGTLEE------SGRPA 206 (421)
Q Consensus 138 ~~~v~~~-i~p~y~-~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~---~~~~~~~~v~GwG~~~~------~~~~~ 206 (421)
...+.++ +||+|+ .....||||||||++|+.|+++|+|||||..... ...+..|+++|||.+.. +...+
T Consensus 243 ~~~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~ 322 (424)
T 3nxp_A 243 ISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQP 322 (424)
T ss_dssp EECEEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CC
T ss_pred EEEEEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCC
Confidence 3345554 569998 4577899999999999999999999999974211 23588999999997643 12336
Q ss_pred cceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCC---CCCCCCcCCCCCeeEEEe-cCCceEEEEEEEeCCCCCCC
Q psy6528 207 CIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPE---GMKDSCQGDSGGPMVFER-EDSRYEQIGIVSWGAGCGRA 282 (421)
Q Consensus 207 ~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~---~~~~~C~GDsGgPL~~~~-~~~~~~lvGI~S~g~~c~~~ 282 (421)
..|+++.+++++.+.|+..+ ...++++||||++.. ...++|+|||||||++.. .+++|+|+||+|||.+|+..
T Consensus 323 ~~L~~~~v~ii~~~~C~~~~---~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~ 399 (424)
T 3nxp_A 323 SVLQVVNLPIVERPVCKDST---RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD 399 (424)
T ss_dssp SBCEEEEEEBCCHHHHHHTC---SSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTC
T ss_pred ccceEEEeeEEcHHHhhhhc---cCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCC
Confidence 78999999999999998543 246889999998643 235999999999999985 37899999999999999998
Q ss_pred CCCeEEEEeceehhhhhhhccc
Q psy6528 283 GYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 283 ~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+.|+|||||+.|++||+++|++
T Consensus 400 ~~pgVyT~Vs~y~~WI~~~i~~ 421 (424)
T 3nxp_A 400 GKYGFYTHVFRLKKWIQKVIDQ 421 (424)
T ss_dssp CSCEEEEECTTCHHHHHHHHHH
T ss_pred CCCEEEEEHHHHHHHHHHHHHH
Confidence 9999999999999999999874
No 79
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=100.00 E-value=5.8e-50 Score=398.33 Aligned_cols=244 Identities=34% Similarity=0.600 Sum_probs=188.4
Q ss_pred CCCccCCCCCCC----CCCccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcc-----eeeEEEEE
Q psy6528 54 YPMCDCSCGETN----DATRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRL-----WFLIKATF 124 (421)
Q Consensus 54 ~~~~~~~cg~~~----~~~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~-----~~~~~v~~ 124 (421)
.+.|...||... ...||+||++|.+++|||+|+|... +.||||||+++||||||||+.... ...+.|++
T Consensus 138 ~p~C~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~--~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~ 215 (399)
T 1gpz_A 138 IPRCLPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 215 (399)
T ss_dssp CCEEEECCSCCSSCCCSSCCCCSCEECCTTSSTTEEEEESS--SEEEEEEETTTEEEECGGGTSCTTC-----CCCEEEE
T ss_pred cCCccCCCCCcCCcccCCCEEECCEECCCCCCCCEEEECCC--CCeEEEEeCCCEEEeChhcccccccccCCcceEEEEe
Confidence 566877899763 2579999999999999999998643 479999999999999999996432 23467899
Q ss_pred eeeeccCCCCCCceeEEEE-EEcCCCCCC---CCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCC
Q psy6528 125 GEYDRCDTSSKPESRFVIR-AIVGDFTFS---NFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLE 200 (421)
Q Consensus 125 G~~~~~~~~~~~~~~~v~~-~i~p~y~~~---~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~ 200 (421)
|.++........ ...+.+ ++||+|+.. ...||||||||++|+.|+++|+|||||........+..++++|||.+.
T Consensus 216 G~~~~~~~~~~~-~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~ 294 (399)
T 1gpz_A 216 GHTNVEELMKLG-NHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME 294 (399)
T ss_dssp SCSBHHHHHHTC-CCCEEEEEECSSCCSSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC---
T ss_pred cccccccccccc-ccceEEEEECCCCCcCCCCCCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCC
Confidence 987653221111 233444 567999753 567999999999999999999999999854333458899999999876
Q ss_pred CCCCCccceeEEEeeeechhhhccccCCC--CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEe-cCCceEEEEEEEeCC
Q psy6528 201 ESGRPACIIRDVEVPILSNQYCRTSTNYS--STRISDNMMCAGYPEGMKDSCQGDSGGPMVFER-EDSRYEQIGIVSWGA 277 (421)
Q Consensus 201 ~~~~~~~~L~~~~~~v~~~~~C~~~~~~~--~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~-~~~~~~lvGI~S~g~ 277 (421)
. ..+..|+++.+++++.++|++.+... ...++++||||+...+++++|+|||||||++.. ++++|+|+||+|||.
T Consensus 295 ~--~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~ 372 (399)
T 1gpz_A 295 E--KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 372 (399)
T ss_dssp ----CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCT
T ss_pred C--ccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCC
Confidence 4 34668999999999999998543211 124788999999766668999999999999875 367999999999999
Q ss_pred CCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 278 GCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 278 ~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
+|+. .|+|||||+.|++||+++|++
T Consensus 373 ~C~~--~~~vyt~V~~y~~WI~~~~~~ 397 (399)
T 1gpz_A 373 GCSR--GYGFYTKVLNYVDWIKKEMEE 397 (399)
T ss_dssp TTTT--TEEEEEEGGGGHHHHHHHTC-
T ss_pred CcCC--CCeEEEEhHHhHHHHHHHhcc
Confidence 9985 489999999999999999875
No 80
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=100.00 E-value=3.8e-49 Score=363.51 Aligned_cols=220 Identities=30% Similarity=0.550 Sum_probs=186.1
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCC-CceeEEEEEE-cC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSK-PESRFVIRAI-VG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~-~~~~~v~~~i-~p 147 (421)
|+||++|.+++|||+|+|+. +.++|+||||+++||||||||+.+ .+.|++|.++....... .+...+.+++ ||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~-~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp 75 (231)
T 2aiq_A 1 VIGGDECNINEHRFLALVYA-NGSLCGGTLINQEWVLTARHCDRG----NMRIYLGMHNLKVLNKDALRRFPKEKYFCLN 75 (231)
T ss_dssp CBSCEECCTTSCTTEEEEEE-TTEEEEEEECSSSEEEECGGGCCS----SCEEEESCSCTTSCCTTCEEECEEEEECCSS
T ss_pred CCCCeECCCCCCCeEEEEEc-CCCeEEEEEEeCCEEEEcHHcCCC----CCEEEEecccccccCCCceEEEEEEEEEECC
Confidence 78999999999999999985 568899999999999999999865 35788998876543322 2334455554 59
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCC-CCCccceeEEEeeeechhhhcccc
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEES-GRPACIIRDVEVPILSNQYCRTST 226 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~-~~~~~~L~~~~~~v~~~~~C~~~~ 226 (421)
.|+.....||||||||++|+.|+++++|||||... ...+..++++|||.+... ...+..|+++.+++++.++|+..+
T Consensus 76 ~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~--~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 153 (231)
T 2aiq_A 76 TRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNP--PSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAY 153 (231)
T ss_dssp CCSSSTTTTCCEEEEESSCCCCBTTBCCCCCCSSC--CCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHC
T ss_pred CCCCCCCCCCEEEEEecCCCCCCCcEEeeECCCCC--CCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhh
Confidence 99998899999999999999999999999999743 356899999999987654 345778999999999999998543
Q ss_pred CCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 227 NYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 227 ~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
. . +.+.||||+..+++.++|+|||||||+++. +|+||+||| ..|+..+.|++||||+.|.+||+++++.+
T Consensus 154 ~---~-~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~~ 224 (231)
T 2aiq_A 154 K---G-LAATTLCAGILEGGKDTCKGDSGGPLICNG-----QFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISGN 224 (231)
T ss_dssp T---T-CCSSEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred c---C-CCcCcEEeccCCCCCcccCCcCCCcEEECC-----EEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcCC
Confidence 2 2 788999998766678999999999999943 799999999 78988889999999999999999998764
No 81
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=100.00 E-value=8.8e-49 Score=358.56 Aligned_cols=217 Identities=29% Similarity=0.579 Sum_probs=187.0
Q ss_pred cccCeeCCCCCCceEEEEeec---CeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEc
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF---NRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIV 146 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~---~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~ 146 (421)
|+||++|.+++|||+|+|... +.++|+||||+++||||||||+.+.....+.|++|.++........+...+.++++
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 80 (221)
T 1fuj_A 1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFL 80 (221)
T ss_dssp CBSCEECCTTSCTTEEEEEETTBTTCCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred CCCCEECCCCCcCCEEEEEEecCCCCEEEEEEEecCCEEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEe
Confidence 789999999999999999874 36899999999999999999998765567899999988765554555666666665
Q ss_pred CCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcccc
Q psy6528 147 GDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTST 226 (421)
Q Consensus 147 p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~ 226 (421)
++|+.....||||||||++|+.|+++++|||||........+..|+++|||.+...+..+..|+++.++++ .+.|+.
T Consensus 81 h~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~-- 157 (221)
T 1fuj_A 81 NNYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCRP-- 157 (221)
T ss_dssp CCCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCCT--
T ss_pred CCCCCCCCcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecCC--
Confidence 69998889999999999999999999999999986444567899999999998776667788999999999 888972
Q ss_pred CCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC-CCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 227 NYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA-GCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 227 ~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~-~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
.|+|++...++.+.|+|||||||+++. +|+||+||+. +|+..+.|++||||+.|.+||+++++
T Consensus 158 ---------~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i~ 221 (221)
T 1fuj_A 158 ---------HNICTFVPRRKAGICFGDSGGPLICDG-----IIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTLR 221 (221)
T ss_dssp ---------TEEEEECSSSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred ---------ceeeeccCCCCCCCCCCCCCCeeEECC-----EEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHhC
Confidence 289998776678999999999999942 7999999954 49877889999999999999999874
No 82
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=100.00 E-value=1.6e-49 Score=414.59 Aligned_cols=241 Identities=33% Similarity=0.680 Sum_probs=187.5
Q ss_pred CCCCCCCCCccccCeeCCCCCCceEEEEeec---CeeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCCCCC
Q psy6528 60 SCGETNDATRIVGGQPTEVNQYPWMVRLSYF---NRFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDTSSK 135 (421)
Q Consensus 60 ~cg~~~~~~rI~gG~~a~~~~~Pw~v~l~~~---~~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~~~~ 135 (421)
.||.. ...||+||++|.+++|||+|+|... +.++||||||+++||||||||+.+. ....+.|++|.++.......
T Consensus 379 ~Cg~~-~~~rIvgG~~a~~~~~Pw~v~L~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~ 457 (625)
T 2f83_A 379 ECTTK-IKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKED 457 (625)
T ss_dssp SSCSC-CCSCCCSSSSCCTTSSTTEEEEEECSSSSEEEEEEEECSSSEEEECGGGGSSCCCGGGEEEEESCSBGGGCCSS
T ss_pred ccCCC-CCCceECCEECCCCCCCeEEEEEEecCCCcEEEEEEEECCCEEEEcHHhCCCCCCCceEEEEEEeccCCCCCCC
Confidence 57865 4689999999999999999999875 4689999999999999999999653 34567899998876544333
Q ss_pred CceeEEEE-EEcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEe
Q psy6528 136 PESRFVIR-AIVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEV 214 (421)
Q Consensus 136 ~~~~~v~~-~i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~ 214 (421)
.+...+.+ ++||+|+.....||||||||++|+.|+++|+|||||........+..++++|||.+...+..+..|+++.+
T Consensus 458 ~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v 537 (625)
T 2f83_A 458 TSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKI 537 (625)
T ss_dssp CCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEE
T ss_pred ceEEeEEEEEECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEE
Confidence 33444554 45699999888999999999999999999999999986444456889999999998776666789999999
Q ss_pred eeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEecee
Q psy6528 215 PILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRY 294 (421)
Q Consensus 215 ~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y 294 (421)
++++.++|++.+ ....+++.||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|+|||||+.|
T Consensus 538 ~i~~~~~C~~~~--~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~-~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y 614 (625)
T 2f83_A 538 PLVTNEECQKRY--RGHKITHKMICAGYREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEY 614 (625)
T ss_dssp CCCCHHHHHTTC--TTSCCCTTBCCC----------CCCTTCEEEEEE-TTEEEEEEEEEECCC----CCCCEEEEGGGG
T ss_pred EEcCHHHHHHHh--ccCCCCCCeEEeecCCCCCcCCCCCcccceEEEE-CCeEEEEEEEEeCCCCCCCCCCeEEEEHHHH
Confidence 999999998543 2345789999999766678999999999999987 7899999999999999988899999999999
Q ss_pred hhhhhhhccc
Q psy6528 295 VEWIKEKSKE 304 (421)
Q Consensus 295 ~~WI~~~~~~ 304 (421)
++||+++++.
T Consensus 615 ~~WI~~~~~~ 624 (625)
T 2f83_A 615 VDWILEKTQA 624 (625)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHHHHhc
Confidence 9999998853
No 83
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.6e-49 Score=374.50 Aligned_cols=228 Identities=18% Similarity=0.345 Sum_probs=177.3
Q ss_pred cCCCCCCCCCCccccCeeCCCCCCceEEEEee-cCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCC
Q psy6528 58 DCSCGETNDATRIVGGQPTEVNQYPWMVRLSY-FNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKP 136 (421)
Q Consensus 58 ~~~cg~~~~~~rI~gG~~a~~~~~Pw~v~l~~-~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~ 136 (421)
+|.||+.... |.++..++|||+|+|.. .+.++|+||||+++||||||||+.+. ..+.|++|.++.. ...
T Consensus 46 ~c~CG~~~~~-----g~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~--~~~~V~~G~~~~~---~~~ 115 (283)
T 3f1s_B 46 QCACGVLTSE-----KRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLH--RNITVKTYFNRTS---QDP 115 (283)
T ss_dssp TTCTTCCCC-------------CCTTEEEEECTTSCEEEEEEEEETTEEEECHHHHTSC--SSCEEEECTTC-C---CCC
T ss_pred ccccCccccC-----CccccccccCCEEEEEecCCCeeeccEEecCCEEEEcHHhcCcc--CceEEEEeeeeCC---CCc
Confidence 4689976543 99999999999999987 56799999999999999999999653 3578999986542 234
Q ss_pred ceeEEEEE-EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCC---CCCCCCCcEEEEecccCCCCCCCccceeEE
Q psy6528 137 ESRFVIRA-IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVL---NNTYEDETGVVMGWGTLEESGRPACIIRDV 212 (421)
Q Consensus 137 ~~~~v~~~-i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~---~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~ 212 (421)
+...+.++ +||+|+..+..||||||||++|+.|+++|+|||||... .....+..++++|||. ..+..+..|+++
T Consensus 116 ~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~--~~~~~~~~L~~~ 193 (283)
T 3f1s_B 116 LMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR--NGTDLGNSLTTR 193 (283)
T ss_dssp EEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBC--C-------CEEE
T ss_pred EEEEeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCC--CCCCCCceeeEE
Confidence 44555554 56999999999999999999999999999999999843 1345689999999998 345567789999
Q ss_pred EeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEec
Q psy6528 213 EVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRIT 292 (421)
Q Consensus 213 ~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~ 292 (421)
.+++++.++|+..+ ...++++||||+... +.|+|||||||++.. +++|+|+||+|||. |+..+.|+|||||+
T Consensus 194 ~v~~~~~~~C~~~~---~~~~~~~~~Ca~~~~---~~~~gDSGgPlv~~~-~~~~~l~GIvS~g~-c~~~~~p~vyt~V~ 265 (283)
T 3f1s_B 194 PVTLVEGEECGQVL---NVTVTTRTYCERSSV---AAMHWMDGSVVTREH-RGSWFLTGVLGSQP-VGGQAHMVLVTKVS 265 (283)
T ss_dssp EEEEECHHHHHHHH---TSCCCTTEEEEECSS---CGGGBCTTCEEEEEC-SSCEEEEEEECCCS-GGGCSSEEEEEEGG
T ss_pred EEeEeCHHHHhhhh---cCCCCCCeEcccCCC---CCCCCCCCCcEEEEE-CCEEEEEEEEEeCC-CCCCCcceEEEEhH
Confidence 99999999998653 245889999998543 356789999999986 78999999999985 77778999999999
Q ss_pred eehhhhhhhcccc
Q psy6528 293 RYVEWIKEKSKEG 305 (421)
Q Consensus 293 ~y~~WI~~~~~~~ 305 (421)
.|++||+++|++.
T Consensus 266 ~y~~WI~~~~~~~ 278 (283)
T 3f1s_B 266 RYSLWFKQIMNAH 278 (283)
T ss_dssp GGHHHHHHHHTC-
T ss_pred HhHHHHHHHhhcc
Confidence 9999999999864
No 84
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=100.00 E-value=4.1e-49 Score=362.30 Aligned_cols=223 Identities=25% Similarity=0.446 Sum_probs=190.7
Q ss_pred ccCeeCCCCCCceEEEEeecCe--e-EEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcC
Q psy6528 71 VGGQPTEVNQYPWMVRLSYFNR--F-YCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVG 147 (421)
Q Consensus 71 ~gG~~a~~~~~Pw~v~l~~~~~--~-~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p 147 (421)
+||++|.+++|||+|+|...+. + +|+||||+++||||||||+.+.....+.|.+|..+....... +...+.+++++
T Consensus 1 ~gG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~-~~~~v~~i~~h 79 (228)
T 3h7o_A 1 KGGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTNLWEDPGK-SDPYVSHVYLS 79 (228)
T ss_dssp CCCEECCGGGSTTEEEEEECGGGCCEEEEEEESSSSEEEECHHHHTTSCGGGCEEEESCSBTTTBCCE-EECCEEEEEES
T ss_pred CCCccCCcCCCCeEEEEeecCCCCceEeeeEEeeCCEEEEcHHhcccCCCCcEEEEecccccccCCCc-eeeeEEEEEcc
Confidence 4899999999999999987543 4 999999999999999999977666778899998876543332 44456666556
Q ss_pred CCCCCCCCCceEEEEECCCcccCC-CccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcccc
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVD-IIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTST 226 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~-~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~ 226 (421)
.|+.....||||||||++|+.|++ .++|||||........+..++++|||.+...+..+..|+++.+++++.++|+..+
T Consensus 80 ~y~~~~~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 159 (228)
T 3h7o_A 80 FYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKY 159 (228)
T ss_dssp SCBTTTTBTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHH
T ss_pred ccCCCCccCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHh
Confidence 999888999999999999999999 9999999986544677999999999998877777888999999999999998653
Q ss_pred CCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 227 NYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 227 ~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
. ...+++.||||+... .++|+|||||||++.. .|+||+|||..|+. +.|++||||+.|.+||++++++
T Consensus 160 ~--~~~~~~~~~Ca~~~~--~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~-~~p~vyt~v~~~~~WI~~~i~~ 227 (228)
T 3h7o_A 160 G--PIFLSLQVFCAQKVG--VSLESGDAGDPTVQQD-----TLVGVAAYFPKRPE-GAPEVFTKVGSYVSWIQDIIKK 227 (228)
T ss_dssp T--TSCCCSSEEEEECTT--CCCCGGGTTCEEEETT-----EEEEEECCCTTCCT-TCCEEEEEGGGTHHHHHHHHTT
T ss_pred c--CccCCceEEecCCCC--CcCCCCCCCCcceecC-----eEEEEEeecCcCCC-CCCcEEEEHHHHHHHHHHHhhc
Confidence 2 245789999998553 7999999999999954 59999999999987 7899999999999999999875
No 85
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=100.00 E-value=9.7e-49 Score=358.97 Aligned_cols=221 Identities=36% Similarity=0.647 Sum_probs=185.2
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCCCCCCceeEEEE-EEcC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDTSSKPESRFVIR-AIVG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~~~~~~~~~v~~-~i~p 147 (421)
|+||++|.+++|||+|+|. +.|+||||+++||||||||+.+. ....+.|++|..+..... .+...+.+ ++||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~----~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~--~~~~~v~~i~~hp 74 (224)
T 3beu_A 1 VVGGTRAAQGEFPFMVRLS----MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSS--AVKVRSTKVLQAP 74 (224)
T ss_dssp CBTCEECCTTTSTTEEEET----TTEEEEEEETTEEEECGGGSCSSEEBCCCEEEESCSBTTCTT--CEEEEEEEEEECT
T ss_pred CCCCeECCCCCCCEEEEEC----CceeEEEeeCCEEEEChhhcCCCCCcceEEEEeeEeecCCCC--ceEEEEEEEEeCC
Confidence 7899999999999999995 46999999999999999999764 345678999987764332 23344444 4569
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccC
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTN 227 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~ 227 (421)
+|+..+..||||||||++|+.+ .|+||+.. ....+..++++|||.+..++..+..|+++.+++++.++|+..+.
T Consensus 75 ~y~~~~~~~DIALl~L~~~v~~----~~i~l~~~--~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~ 148 (224)
T 3beu_A 75 GFTKETYGKDWALIKLAQPINQ----PTLKIATT--TAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSS 148 (224)
T ss_dssp TCCCGGGSCCCEEEEESSCCCS----CCCEECCS--STTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCS
T ss_pred CcCCCcCCCCEEEEEeCCCCCC----Cccccccc--cccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcC
Confidence 9998888999999999999963 68899864 23445699999999988777777889999999999999985432
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
...+.+.||||+...++.++|+|||||||++..++++|+|+||+|||.+|+..+.|++||||+.|.+||++++++
T Consensus 149 --~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (224)
T 3beu_A 149 --FILVANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAART 223 (224)
T ss_dssp --SCCCGGGEEEECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHHHTT
T ss_pred --CccCCCCeEEeccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 234778999999766678999999999999987678999999999999999888999999999999999999874
No 86
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=100.00 E-value=1.9e-47 Score=351.84 Aligned_cols=220 Identities=29% Similarity=0.564 Sum_probs=181.9
Q ss_pred cccCeeCCCCCCceEEEEee----cCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEE-E
Q psy6528 70 IVGGQPTEVNQYPWMVRLSY----FNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIR-A 144 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~-~ 144 (421)
|+||++|.+++|||+|+|.. .+.++|+||||+++||||||||+.+ ...+.|++|..+.... .+...+.+ +
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~--~~~~~v~~G~~~~~~~---~~~~~v~~i~ 75 (230)
T 2hlc_A 1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD--AVSVVVYLGSAVQYEG---EAVVNSERII 75 (230)
T ss_dssp CBTCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTT--EEEEEEEESCSBTTCC---SEEEECSEEE
T ss_pred CCCCeECCCCCCCcEEEEEEEecCCCCEEEEEEEeeCCEEEECHHHCCC--CcceEEEEeeeecCCC---CeEEEEEEEE
Confidence 78999999999999999987 4578999999999999999999975 3567899998766442 23344444 4
Q ss_pred EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCC--CCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhh
Q psy6528 145 IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLN--NTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYC 222 (421)
Q Consensus 145 i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~--~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C 222 (421)
+||+|+.....||||||||+ |+.|+++++|||||.... ....+..++++|||.+.... ..|+++.+++++.++|
T Consensus 76 ~hp~y~~~~~~~DiALl~L~-~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~---~~l~~~~~~~~~~~~C 151 (230)
T 2hlc_A 76 SHSMFNPDTYLNDVALIKIP-HVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDT---VILQYTYNLVIDNDRC 151 (230)
T ss_dssp ECTTCBTTTTBTCCEEEECS-CCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCC---CBCEEEEEEEECHHHH
T ss_pred ECCCCCCCCccccEEEEEec-CCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCC---ceeEEEEEEEeCHHHh
Confidence 56999998899999999999 999999999999998532 23568899999999876543 5799999999999999
Q ss_pred ccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC--CCCCCCCCeEEEEeceehhhhhh
Q psy6528 223 RTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA--GCGRAGYPGVYTRITRYVEWIKE 300 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~--~c~~~~~p~vyt~V~~y~~WI~~ 300 (421)
++.+ ....+.+.||||+.. ++.++|+|||||||++.. +++|+||+|||. +| ..+.|++||||+.|.+||++
T Consensus 152 ~~~~--~~~~~~~~~~Ca~~~-~~~~~C~GDSGgPl~~~~---~~~l~Gi~S~g~~~~C-~~~~p~vyt~V~~~~~WI~~ 224 (230)
T 2hlc_A 152 AQEY--PPGIIVESTICGDTS-DGKSPCFGDSGGPFVLSD---KNLLIGVVSFVSGAGC-ESGKPVGFSRVTSYMDWIQQ 224 (230)
T ss_dssp HTTS--CTTSSCTTEEEECCT-TSCBCCTTCTTCEEEEGG---GTEEEEEEEECCTTCT-TSCCCEEEEEGGGGHHHHHH
T ss_pred hhhh--CCCcccCCeEEecCC-CCCCcCCCCCCCeeEECc---CCEEEEEEEEeCCCCC-CCCCCCEEEEhHHhHHHHHH
Confidence 8543 223578999999854 457999999999999864 348999999987 67 45789999999999999999
Q ss_pred hcccc
Q psy6528 301 KSKEG 305 (421)
Q Consensus 301 ~~~~~ 305 (421)
+++..
T Consensus 225 ~~~~~ 229 (230)
T 2hlc_A 225 NTGIK 229 (230)
T ss_dssp HHCCC
T ss_pred hhCcC
Confidence 98753
No 87
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=100.00 E-value=1.7e-48 Score=402.28 Aligned_cols=241 Identities=30% Similarity=0.582 Sum_probs=154.4
Q ss_pred CCCCCC----CCCccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCC-C
Q psy6528 60 SCGETN----DATRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTS-S 134 (421)
Q Consensus 60 ~cg~~~----~~~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~-~ 134 (421)
.||... ...||+||++|.+++|||+|+|...+.++||||||+++||||||||+.+.....+.|++|.++..... .
T Consensus 308 ~CG~~~~~~~~~~rIvgG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~ 387 (565)
T 2xrc_A 308 SCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDLK 387 (565)
T ss_dssp CCCC--------------------CCTTBCEEEESSSCCCCCEEEETTEEEECHHHHTTCSSCCEEEEC-----------
T ss_pred ccCCCCCcccCCCceECCEECCCCCCCcEEEEecCCceeeeEEEEeCCEEEEChhhcccCCCcceEEEEEEeeccCCCCC
Confidence 577654 24699999999999999999998877899999999999999999999776666788999988764433 2
Q ss_pred CCceeEEEEE-EcCCCCCCCCCCceEEEEECCCcccCC----CccccccCCCCCCCCCCCcEEEEecccCCCCCCCccce
Q psy6528 135 KPESRFVIRA-IVGDFTFSNFDNDIALLRLNDRVPIVD----IIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACII 209 (421)
Q Consensus 135 ~~~~~~v~~~-i~p~y~~~~~~~DIALlkL~~pv~~s~----~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L 209 (421)
..+...+.++ +||+|+..++.||||||||++|+.|++ .++|||||........+..++++|||.+..+ ..+..|
T Consensus 388 ~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~-~~~~~L 466 (565)
T 2xrc_A 388 RIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDN-ERVFSL 466 (565)
T ss_dssp --CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC--------------
T ss_pred ccEEEEEEEEEeCCCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCC-Ccccee
Confidence 3344445554 569999999999999999999999864 6899999976444556899999999988653 356789
Q ss_pred eEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEE
Q psy6528 210 RDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYT 289 (421)
Q Consensus 210 ~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt 289 (421)
+++.+++++. |+..+. .......||||+...++.++|+|||||||++...+++|+|+||+|||.+|+..+.|+|||
T Consensus 467 ~~~~v~i~~~--C~~~~~--~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYT 542 (565)
T 2xrc_A 467 QWGEVKLISN--CSKFYG--NRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYT 542 (565)
T ss_dssp CEEEEEECSC--THHHHT--TSCCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC------CCCCEEEE
T ss_pred eEEeeeehHH--hHHhhc--cCcCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEE
Confidence 9999999984 975432 223345599999877778999999999999986678999999999999999888999999
Q ss_pred Eeceehhhhhhhcccc
Q psy6528 290 RITRYVEWIKEKSKEG 305 (421)
Q Consensus 290 ~V~~y~~WI~~~~~~~ 305 (421)
||++|++||+++++..
T Consensus 543 rVs~y~~WI~~~i~~~ 558 (565)
T 2xrc_A 543 KVANYFDWISYHVGRP 558 (565)
T ss_dssp EGGGGHHHHHHHC---
T ss_pred EHHHHHHHHHHHhccc
Confidence 9999999999999754
No 88
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=100.00 E-value=3.1e-47 Score=403.00 Aligned_cols=236 Identities=33% Similarity=0.676 Sum_probs=198.6
Q ss_pred CCCCCCC-----CCccccCeeCCCCCCceEEEEeec-CeeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCC
Q psy6528 60 SCGETND-----ATRIVGGQPTEVNQYPWMVRLSYF-NRFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDT 132 (421)
Q Consensus 60 ~cg~~~~-----~~rI~gG~~a~~~~~Pw~v~l~~~-~~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~ 132 (421)
.||.+.. ..||+||.+|.+++|||||+|... +.++||||||+++||||||||+... ....+.|++|.++....
T Consensus 547 ~CG~~~~~~~~~~~RIvGG~~a~~~~~PW~VsL~~~~~~~~CGGSLIs~~wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~ 626 (791)
T 4dur_A 547 DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNL 626 (791)
T ss_dssp CTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGSSCCCGGGCEEEESCCBSSSC
T ss_pred CcCCcccccccCCCceECCEECCCCCCCeEEEEEecCCCeEEEEEEEeCCEEEECHHHcCCcCCCceEEEEeccccccCC
Confidence 5887543 369999999999999999999865 6789999999999999999999653 34567899999877655
Q ss_pred CCCCceeEEEEEEc-CCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeE
Q psy6528 133 SSKPESRFVIRAIV-GDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRD 211 (421)
Q Consensus 133 ~~~~~~~~v~~~i~-p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~ 211 (421)
....+...+.+++. |. .||||||+|++|+.|+++|+|||||........+..++++|||.+.. +..+..|++
T Consensus 627 ~~~~q~~~V~~i~~hp~------~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~-~~~s~~L~~ 699 (791)
T 4dur_A 627 EPHVQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQG-TFGAGLLKE 699 (791)
T ss_dssp CTTCEEEEEEEEEECTT------CCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC----CCTTBCEE
T ss_pred CCccEEEEEEEEECCCC------CCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCC-CCCCCeeEE
Confidence 55555555666554 54 58999999999999999999999998655566789999999998764 345678999
Q ss_pred EEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEe
Q psy6528 212 VEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRI 291 (421)
Q Consensus 212 ~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V 291 (421)
+.+++++.+.|+.. .+....++++||||+...++.++|+|||||||++.. +++|+|+||+|||.+|+..+.|+|||||
T Consensus 700 ~~v~ii~~~~C~~~-~~~~~~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~-~~~~~LvGIvS~G~gC~~~~~PgVYTrV 777 (791)
T 4dur_A 700 AQLPVIENKVCNRY-EFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFE-KDKYILQGVTSWGLGCARPNKPGVYVRV 777 (791)
T ss_dssp EEEEEECHHHHTST-TTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEE-TTEEEEEEECCTTTCCBBTTBCEEEEEG
T ss_pred EEEEEeCHHHhhcc-cccCCCCCCCeEEeccCCCCCCCCCCCcccceEEEe-CCeEEEEEEEEeCCCCCCCCCCeEEEEH
Confidence 99999999999843 233356899999999877788999999999999987 7899999999999999998999999999
Q ss_pred ceehhhhhhhccc
Q psy6528 292 TRYVEWIKEKSKE 304 (421)
Q Consensus 292 ~~y~~WI~~~~~~ 304 (421)
+.|++||+++|++
T Consensus 778 s~y~dWI~~~i~~ 790 (791)
T 4dur_A 778 SRFVTWIEGVMRN 790 (791)
T ss_dssp GGTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 89
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=100.00 E-value=1.4e-46 Score=362.61 Aligned_cols=226 Identities=19% Similarity=0.354 Sum_probs=186.2
Q ss_pred cCCCCCCCCCCccccCeeCCCCCCceEEEEee-cCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCC
Q psy6528 58 DCSCGETNDATRIVGGQPTEVNQYPWMVRLSY-FNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKP 136 (421)
Q Consensus 58 ~~~cg~~~~~~rI~gG~~a~~~~~Pw~v~l~~-~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~ 136 (421)
+|.||.... .|+++..++|||+|+|.. .+.++|+||||+++||||||||+.+. ..+.|++|.++... ..
T Consensus 87 ~c~cg~~~~-----~G~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~--~~~~V~~G~~~~~~---~~ 156 (317)
T 3h5c_B 87 QCACGVLTS-----EKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLH--RNITVKTYFNRTSQ---DP 156 (317)
T ss_dssp SCCCCCCSC-----CCSSCCTTCCTTEEEEECSSSCEEEEEEEEETTEEEECHHHHHSC--SSCEEEECTTSCTT---SC
T ss_pred ccccccccc-----ccccCccCCCCcEEEEeccCCceeeeeEEeeCCEEEEChHhcCcC--CceEEEEeeecCCC---Cc
Confidence 356665432 389999999999999986 56789999999999999999999543 35688999765432 33
Q ss_pred ceeEEEEE-EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCC---CCCCCCCcEEEEecccCCCCCCCccceeEE
Q psy6528 137 ESRFVIRA-IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVL---NNTYEDETGVVMGWGTLEESGRPACIIRDV 212 (421)
Q Consensus 137 ~~~~v~~~-i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~---~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~ 212 (421)
+...+.++ +||+|+..+..||||||||++|+.|+++|+|||||... .....+..++++|||. ..+..+..|+++
T Consensus 157 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~--~~~~~~~~L~~~ 234 (317)
T 3h5c_B 157 LMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR--NGTDLGNSLTTR 234 (317)
T ss_dssp EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCT--TCCSSSCCCBCC
T ss_pred EEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCC--CCCCCCccceEE
Confidence 44455554 56999999999999999999999999999999999853 1345689999999998 345567789999
Q ss_pred EeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEec
Q psy6528 213 EVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRIT 292 (421)
Q Consensus 213 ~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~ 292 (421)
.+++++.++|++.+. ..++++||||+... +.|+|||||||++.. +++|+|+||+|||. |+..+.|++||||+
T Consensus 235 ~v~~~~~~~C~~~~~---~~~~~~~~Ca~~~~---~~~~gDsGgPl~~~~-~~~~~l~Gi~S~g~-~~~~~~p~vyt~V~ 306 (317)
T 3h5c_B 235 PVTLVEGEECGQVLN---VTVTTRTYCERSSV---AAMHWMDGSVVTREH-RGSWFLTGVLGSQP-VGGQAHMVLVTKVS 306 (317)
T ss_dssp EEEEECHHHHHHHHT---CCCCTTEEEEECSC---CCCCCCTTCEEEEEE-TTEEEEEEEECCCC-SSCCTTEEEEEEGG
T ss_pred EEEEECHHHHhhhhc---CcCCCceeECCCCC---CCcCCCCCCCEEEec-CCEEEEEEEEEECC-CCCCCcceEEEEhH
Confidence 999999999986532 45889999998543 468899999999986 78999999999985 77778899999999
Q ss_pred eehhhhhhhcc
Q psy6528 293 RYVEWIKEKSK 303 (421)
Q Consensus 293 ~y~~WI~~~~~ 303 (421)
.|++||+++|+
T Consensus 307 ~y~~WI~~~i~ 317 (317)
T 3h5c_B 307 RYSLWFKQIMN 317 (317)
T ss_dssp GCHHHHHHHHC
T ss_pred HhHHHHHHHhC
Confidence 99999999874
No 90
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=100.00 E-value=1.2e-43 Score=362.63 Aligned_cols=235 Identities=25% Similarity=0.483 Sum_probs=180.4
Q ss_pred cCCCCCCCCCCccccCeeCCCCCCceEEEEeec----CeeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCC
Q psy6528 58 DCSCGETNDATRIVGGQPTEVNQYPWMVRLSYF----NRFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDT 132 (421)
Q Consensus 58 ~~~cg~~~~~~rI~gG~~a~~~~~Pw~v~l~~~----~~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~ 132 (421)
...||.... ++..+.+++|||+|+|.+. +.++||||||+++||||||||+... ....+.|++|..
T Consensus 208 ~~~CG~~~~-----~~~~~~~~~~Pw~v~l~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~----- 277 (497)
T 1rrk_A 208 LSLCGMVWE-----HRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGE----- 277 (497)
T ss_dssp TTCTTCCCC-----CTTCCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEETTC-----
T ss_pred cCCCCCCCC-----CCCCCCccccCcEEEEEEEcCCCCCceeEEEEecCCEEEECHHhCCCCCCceEEEEEeCCc-----
Confidence 346886532 2456788999999999762 4689999999999999999999653 335678888863
Q ss_pred CCCCceeEEEE-EEcCCCCCC---------CCCCceEEEEECCCcccCCCccccccCCCCC-----CCCCCCcEEEEecc
Q psy6528 133 SSKPESRFVIR-AIVGDFTFS---------NFDNDIALLRLNDRVPIVDIIKPVCLPTVLN-----NTYEDETGVVMGWG 197 (421)
Q Consensus 133 ~~~~~~~~v~~-~i~p~y~~~---------~~~~DIALlkL~~pv~~s~~v~picLp~~~~-----~~~~~~~~~v~GwG 197 (421)
.+...+.+ ++||+|+.. .+.||||||||++|+.|+++|+|||||.... ....+..|++.|||
T Consensus 278 ---~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g 354 (497)
T 1rrk_A 278 ---KRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEE 354 (497)
T ss_dssp ---SSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHH
T ss_pred ---cceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhccccc
Confidence 22344444 457999864 5789999999999999999999999997421 23457888899999
Q ss_pred cCCCCC-------CCccceeEEEeeeec---hhhhccccC----CC-----CCCCCCCeEEeccCCC--CCCCCcCCCCC
Q psy6528 198 TLEESG-------RPACIIRDVEVPILS---NQYCRTSTN----YS-----STRISDNMMCAGYPEG--MKDSCQGDSGG 256 (421)
Q Consensus 198 ~~~~~~-------~~~~~L~~~~~~v~~---~~~C~~~~~----~~-----~~~~~~~~lCa~~~~~--~~~~C~GDsGg 256 (421)
.+.... ..+..|+++.+++++ .++|+.... +. ...++++||||+...+ ++++|+|||||
T Consensus 355 ~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGG 434 (497)
T 1rrk_A 355 LLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGG 434 (497)
T ss_dssp HSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTC
T ss_pred ccCCccccceeeccCCCcceeeeEEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCC
Confidence 764321 235679999999998 689985321 11 1247899999986543 47899999999
Q ss_pred eeEEEecCCceEEEEEEEeCC--CCC----CCCCCe----EEEEeceehhhhhhhcccce
Q psy6528 257 PMVFEREDSRYEQIGIVSWGA--GCG----RAGYPG----VYTRITRYVEWIKEKSKEGC 306 (421)
Q Consensus 257 PL~~~~~~~~~~lvGI~S~g~--~c~----~~~~p~----vyt~V~~y~~WI~~~~~~~~ 306 (421)
||++.. +++|+|+||+|||. +|+ ..+.|+ +||+|++|++||++++++..
T Consensus 435 PL~~~~-~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~~~~~WI~~~~~~~~ 493 (497)
T 1rrk_A 435 PLIVHK-RSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDED 493 (497)
T ss_dssp EEEEEE-TTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTTTSS
T ss_pred eeEEEe-CCEEEEEEEEEecCCCCCCCccccCCCCCccceeeeeHHHHHHHHHHHhCccc
Confidence 999987 78999999999998 698 456785 99999999999999998653
No 91
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=100.00 E-value=7.5e-44 Score=365.28 Aligned_cols=237 Identities=25% Similarity=0.485 Sum_probs=175.4
Q ss_pred CCCCCCCCCCccccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCc-ceeeEEEEEeeeeccCCCCCCc
Q psy6528 59 CSCGETNDATRIVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGR-LWFLIKATFGEYDRCDTSSKPE 137 (421)
Q Consensus 59 ~~cg~~~~~~rI~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~-~~~~~~v~~G~~~~~~~~~~~~ 137 (421)
+.||.. .++|.++.+++|||+|+|...+.++||||||+++||||||||+.+. ....+.|++|.++.. ..+
T Consensus 218 ~~CG~~-----~~~g~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~----~~~ 288 (509)
T 2odp_A 218 TICGVG-----NMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQ----WGK 288 (509)
T ss_dssp CCSSCC-----CCCTTSCHHHHCTTEEEEEC----CEEEEECSSSEEEECGGGC--------CEEEECCTTCT----TCE
T ss_pred cccCCc-----CCCCCccccCCCCcEEEEEeCCCcEEEEEEEcCCEEEEcHHHcCCCCCcceEEEEeCCcccC----CCc
Confidence 567864 4689999999999999998877899999999999999999999652 345578999987532 223
Q ss_pred eeEEEE-EEcCCCCCC---------CCCCceEEEEECCCcccCCCccccccCCCCC-----CCCCCCcEEEEecccCCCC
Q psy6528 138 SRFVIR-AIVGDFTFS---------NFDNDIALLRLNDRVPIVDIIKPVCLPTVLN-----NTYEDETGVVMGWGTLEES 202 (421)
Q Consensus 138 ~~~v~~-~i~p~y~~~---------~~~~DIALlkL~~pv~~s~~v~picLp~~~~-----~~~~~~~~~v~GwG~~~~~ 202 (421)
...+.+ ++||+|+.. .+.||||||+|++|+.|+++|+|||||.... ....+..|++.|||.+...
T Consensus 289 ~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~ 368 (509)
T 2odp_A 289 EFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQ 368 (509)
T ss_dssp EECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSS
T ss_pred eeeeEEEEECCCCccccccccccccccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccc
Confidence 344544 457999874 5789999999999999999999999997421 2345788889999976543
Q ss_pred CCCc----cceeEEEeeee---chhhhccccC-----CC-----CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCC
Q psy6528 203 GRPA----CIIRDVEVPIL---SNQYCRTSTN-----YS-----STRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDS 265 (421)
Q Consensus 203 ~~~~----~~L~~~~~~v~---~~~~C~~~~~-----~~-----~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~ 265 (421)
.... ...+++.+.++ +.++|+.... +. ...++++||||+. .+++++|+|||||||+|.. ++
T Consensus 369 ~~~~~~~~l~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~-~~~~~~C~GDSGGPL~~~~-~~ 446 (509)
T 2odp_A 369 SVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGT-QEDESPCKGESGGAVFLER-RF 446 (509)
T ss_dssp EEEEEEECTTSCEEEEEEECTHHHHHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECC-TTCCCCCGGGTTCEEEEEE-TT
T ss_pred cceeeeecccCceeeEEEecCccHHHHHHHhhcccccccccccccccccCCEEEeCC-CCCCcccCCCccCceEEEE-CC
Confidence 2111 11134555554 6899985321 11 2357899999985 4568999999999999987 78
Q ss_pred ceEEEEEEEeCC--CCC---------CCCCC------eEEEEeceehhhhhhhcccce
Q psy6528 266 RYEQIGIVSWGA--GCG---------RAGYP------GVYTRITRYVEWIKEKSKEGC 306 (421)
Q Consensus 266 ~~~lvGI~S~g~--~c~---------~~~~p------~vyt~V~~y~~WI~~~~~~~~ 306 (421)
+|+|+||+|||. +|+ ....| ++||||++|.+||+++++...
T Consensus 447 ~~~l~GIvS~G~~~~C~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~~~~WI~~~~~~~~ 504 (509)
T 2odp_A 447 RFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHLGDVL 504 (509)
T ss_dssp EEEEEEEEEEESCCTTC-----CCCCCCCTTCSSCCCEEEEEGGGCHHHHHHHHTTTS
T ss_pred eEEEEEEEEEcCCCCCCCcccccccccCcccCCCCCCceeeeHHHHhHHHHHHhCCcc
Confidence 999999999997 696 34556 599999999999999998653
No 92
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=100.00 E-value=6.5e-41 Score=358.42 Aligned_cols=227 Identities=24% Similarity=0.471 Sum_probs=173.8
Q ss_pred cccCeeCCCCCCceEEEEeec----CeeEEEEEEEeCCEEEEccccccC-cceeeEEEEEeeeeccCCCCCCceeEEE-E
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYF----NRFYCGGTLINDRYVLTAAHCVKG-RLWFLIKATFGEYDRCDTSSKPESRFVI-R 143 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~----~~~~CgGtLIs~~~VLTAAhC~~~-~~~~~~~v~~G~~~~~~~~~~~~~~~v~-~ 143 (421)
..+|.++..++|||+|.|... +.++|+||||+++||||||||+.. .....+.|++|... +...+. .
T Consensus 457 ~~~~~~~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~--------~~~~v~~i 528 (741)
T 3hrz_D 457 WEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK--------RDLEIEVV 528 (741)
T ss_dssp CCC---CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC-----CCEEEEETTCS--------CCEEEEEE
T ss_pred cccCCcccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhccccCCcceEEEEeCCCc--------eEEEEEEE
Confidence 456899999999998888763 458999999999999999999965 23456788888532 233344 4
Q ss_pred EEcCCCCCCC---------CCCceEEEEECCCcccCCCccccccCCCC-----CCCCCCCcEEEEecccCCCCC------
Q psy6528 144 AIVGDFTFSN---------FDNDIALLRLNDRVPIVDIIKPVCLPTVL-----NNTYEDETGVVMGWGTLEESG------ 203 (421)
Q Consensus 144 ~i~p~y~~~~---------~~~DIALlkL~~pv~~s~~v~picLp~~~-----~~~~~~~~~~v~GwG~~~~~~------ 203 (421)
++||+|+... +.||||||||++|+.|+++|+|||||... .....+..|.+.|||.+....
T Consensus 529 ~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~ 608 (741)
T 3hrz_D 529 LFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFV 608 (741)
T ss_dssp EECTTCCTTTTGGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEE
T ss_pred EECCCCCcccccccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceec
Confidence 5579998643 68999999999999999999999999632 124568889999999876543
Q ss_pred -CCccceeEEEeeeec---hhhhccccCCC---------CCCCCCCeEEeccCCC--CCCCCcCCCCCeeEEEecCCceE
Q psy6528 204 -RPACIIRDVEVPILS---NQYCRTSTNYS---------STRISDNMMCAGYPEG--MKDSCQGDSGGPMVFEREDSRYE 268 (421)
Q Consensus 204 -~~~~~L~~~~~~v~~---~~~C~~~~~~~---------~~~~~~~~lCa~~~~~--~~~~C~GDsGgPL~~~~~~~~~~ 268 (421)
..+..|+++.+++++ .+.|+....+. ...++++||||+...+ ++++|+|||||||++.. +++|+
T Consensus 609 ~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~-~~~~~ 687 (741)
T 3hrz_D 609 SEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHK-RSRFI 687 (741)
T ss_dssp EESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEE-TTEEE
T ss_pred cccccccccceeEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEee-CCeEE
Confidence 235679999999998 78898632211 2358999999987653 57899999999999987 78999
Q ss_pred EEEEEEeCC--CCCC---CCCC-----eEEEEeceehhhhhhhcccc
Q psy6528 269 QIGIVSWGA--GCGR---AGYP-----GVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 269 lvGI~S~g~--~c~~---~~~p-----~vyt~V~~y~~WI~~~~~~~ 305 (421)
|+||+|||. +|+. .+.| ++||+|+.|++||++++++.
T Consensus 688 lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 688 QVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE 734 (741)
T ss_dssp EEEEEEEESSCCCC------CCCTTCEEEEEEGGGSHHHHHHHTTTS
T ss_pred EEEEEeecCCcccCCcccccCCCCCccceEEEhHHhHHHHHHHhcCC
Confidence 999999997 8987 6789 99999999999999999875
No 93
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=100.00 E-value=3.8e-40 Score=299.97 Aligned_cols=201 Identities=17% Similarity=0.220 Sum_probs=157.6
Q ss_pred CCCccccCeeCCCCCCce--EEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeE----EEEEeeeeccCCCCCCcee
Q psy6528 66 DATRIVGGQPTEVNQYPW--MVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLI----KATFGEYDRCDTSSKPESR 139 (421)
Q Consensus 66 ~~~rI~gG~~a~~~~~Pw--~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~----~v~~G~~~~~~~~~~~~~~ 139 (421)
...||+||.+ +|| ++.+. .+.++|+||||+++||||||||+.+.....+ .|++|..+...... ..
T Consensus 7 ~~~rI~~g~~-----~P~~~~~~~~-~~~~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~---~~ 77 (215)
T 1p3c_A 7 GRTKVANTRV-----APYNSIAYIT-FGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNG---SA 77 (215)
T ss_dssp CCEECSCTTS-----TTGGGEEEEE-CSSCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTC---CE
T ss_pred CCEEecCCCc-----CCCeEEEEEE-cCCceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCC---eE
Confidence 3568999865 588 45554 5678999999999999999999965433344 88999887644322 34
Q ss_pred EEEEE-EcCCCC-CCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeee
Q psy6528 140 FVIRA-IVGDFT-FSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPIL 217 (421)
Q Consensus 140 ~v~~~-i~p~y~-~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~ 217 (421)
.+.++ +||+|+ .....||||||||++| |+++++|||||.. ....+..++++|||.+... ..+..|+++.++++
T Consensus 78 ~v~~i~~hp~y~~~~~~~~DiAll~L~~~--~~~~v~pi~l~~~--~~~~g~~~~~~Gwg~~~~~-~~~~~l~~~~~~~~ 152 (215)
T 1p3c_A 78 NMTEFYVPSGYINTGASQYDFAVIKTDTN--IGNTVGYRSIRQV--TNLTGTTIKISGYPGDKMR-STGKVSQWEMSGSV 152 (215)
T ss_dssp EEEEEECCHHHHHHCCGGGCCEEEEESSC--HHHHHCCCCBCCC--SCCTTCEEEEEECCHHHHH-HHSSCCCEEEEEEC
T ss_pred EEEEEEeCCccccCCCcccCEEEEEECCC--CcccceeeecCCC--cccCCCeEEEecCCCCCcc-cccceechhccCcc
Confidence 45554 468994 5677899999999996 6788999999974 3467899999999976432 33567899999999
Q ss_pred chhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhh
Q psy6528 218 SNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEW 297 (421)
Q Consensus 218 ~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~W 297 (421)
+.+.|.... ++.++|+|||||||++.+ + +|+||+|||..|+ ..|++||+|++|.+|
T Consensus 153 ~~~~c~~~~------------------~~~~~C~GDSGgPl~~~~--g--~lvGi~S~g~~c~--~~p~v~t~v~~~~~W 208 (215)
T 1p3c_A 153 TREDTNLAY------------------YTIDTFSGNSGSAMLDQN--Q--QIVGVHNAGYSNG--TINGGPKATAAFVEF 208 (215)
T ss_dssp CEECSSEEE------------------ECCCCCTTCTTCEEECTT--S--CEEEECCEEEGGG--TEEEEEBCCHHHHHH
T ss_pred Ccccchhee------------------eccccCCCCCCCeeEccC--C--eEEEEEecccCCC--ccCceeEechHHHHH
Confidence 999997321 136899999999999853 2 7999999999887 679999999999999
Q ss_pred hhhhccc
Q psy6528 298 IKEKSKE 304 (421)
Q Consensus 298 I~~~~~~ 304 (421)
|++++++
T Consensus 209 I~~~~~~ 215 (215)
T 1p3c_A 209 INYAKAQ 215 (215)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9998753
No 94
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=100.00 E-value=2.9e-34 Score=246.61 Aligned_cols=145 Identities=35% Similarity=0.716 Sum_probs=125.9
Q ss_pred CCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCC---CCccceeEEEeeeechhhhcccc
Q psy6528 150 TFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESG---RPACIIRDVEVPILSNQYCRTST 226 (421)
Q Consensus 150 ~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~---~~~~~L~~~~~~v~~~~~C~~~~ 226 (421)
+..++.||||||||++|+.|+++|+|||||... ...+..|+++|||.+...+ ..+..|+++.+++++.++|++.+
T Consensus 2 d~~~~~nDIALl~L~~~v~~~~~v~picLp~~~--~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~ 79 (152)
T 2pka_B 2 DGKDYSHDLMLLRLQSPAKITDAVKVLELPTQE--PELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAH 79 (152)
T ss_dssp CCSBCTTCCEEEEESSCCCCCSSCCCCCCCSSC--CCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHC
T ss_pred CCCCCCCCEEEEEECCCCcCCCCEEeEECCCCC--CCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhh
Confidence 445678999999999999999999999999743 3468999999999987665 56788999999999999998543
Q ss_pred CCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeC-CCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 227 NYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWG-AGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 227 ~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g-~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
...++++||||+...++.++|+|||||||++.. +|+||+||| ..|+..+.|++||||++|.+||++++++
T Consensus 80 ---~~~~~~~~iCa~~~~~~~~~C~GDsGgPL~~~g-----~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 150 (152)
T 2pka_B 80 ---PDKVTESMLCAGYLPGGKDTCMGDSGGPLICNG-----MWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTITE 150 (152)
T ss_dssp ---SSBCCTTEEEEECTTSSCBCCTTCTTCEEEETT-----EEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred ---cCCCCCCEEeeccCCCCCcccCCccccceEECC-----EEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhcc
Confidence 235789999998766668999999999999953 699999999 7899888999999999999999999865
No 95
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=100.00 E-value=1.3e-32 Score=230.28 Aligned_cols=128 Identities=30% Similarity=0.556 Sum_probs=108.2
Q ss_pred cccCeeCCCCCCceEEEEee-cCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSY-FNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVG 147 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~-~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p 147 (421)
|+||++|.+++|||+|+|.. .+.++||||||+++||||||||+.+ ....|++|.++........+...+.++ +||
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~---~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp 77 (131)
T 1yph_C 1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT---TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNS 77 (131)
T ss_dssp CBTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGCCC---TTSEEEESCSBTTCSSSCCEEEEEEEEEECT
T ss_pred CCCCEECCCCCcCcEEEEEeCCCCEEEEEEEeeCCEEEECHHHCCC---CCeEEEEeEccCCCCCCceEEEEEEEEEeCC
Confidence 78999999999999999987 4678999999999999999999965 345788999877554444455556555 469
Q ss_pred CCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCC
Q psy6528 148 DFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLE 200 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~ 200 (421)
+|+..+..||||||||++|+.|+++++|||||........+..|+++|||.+.
T Consensus 78 ~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~ 130 (131)
T 1yph_C 78 KYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTR 130 (131)
T ss_dssp TCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSC
T ss_pred CCCCCCCCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCccC
Confidence 99998899999999999999999999999999864445578999999999864
No 96
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.97 E-value=2.3e-31 Score=242.24 Aligned_cols=194 Identities=12% Similarity=0.143 Sum_probs=133.8
Q ss_pred CCCCCceEEEEeec---CeeEEEEEEEe---CCEEEEccccccCcc----eeeEEEEEeeeeccCCCCCCceeEEEE-EE
Q psy6528 77 EVNQYPWMVRLSYF---NRFYCGGTLIN---DRYVLTAAHCVKGRL----WFLIKATFGEYDRCDTSSKPESRFVIR-AI 145 (421)
Q Consensus 77 ~~~~~Pw~v~l~~~---~~~~CgGtLIs---~~~VLTAAhC~~~~~----~~~~~v~~G~~~~~~~~~~~~~~~v~~-~i 145 (421)
.+++|||+++|.+. +.++||||||+ ++||||||||+.+.. ...+.+++|.++... ......+.+ ++
T Consensus 2 ~~~~~p~~g~l~~~~~~~~~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~---~~~~~~v~~~~~ 78 (218)
T 3cp7_A 2 NPADSPHIGKVFFSTNQGDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGES---EHGVWAAEELVT 78 (218)
T ss_dssp -CTTCTTEEEEEEEETTEEEEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCC---TTCCEEEEEEEE
T ss_pred CCCCCceEEEEEEEcCCCCeEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCC---CccEEEEEEEEE
Confidence 36799999999863 35899999999 999999999996532 245677788665321 122334444 45
Q ss_pred cCCCCC-CCCCCceEEEEECCC--cccCCCcc-ccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhh
Q psy6528 146 VGDFTF-SNFDNDIALLRLNDR--VPIVDIIK-PVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQY 221 (421)
Q Consensus 146 ~p~y~~-~~~~~DIALlkL~~p--v~~s~~v~-picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~ 221 (421)
||+|+. ....||||||||++| +.|++.++ |++|+.. ...+..++++|||.+..... ..| ..
T Consensus 79 hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~---~~~g~~~~v~GwG~~~~~~~--~~l----------~~ 143 (218)
T 3cp7_A 79 SAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFN---QPRGQYYSAYGYPAAAPFNG--QEL----------HS 143 (218)
T ss_dssp CHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCS---CCSSCEEEEEECCCSTTCCS--SSC----------EE
T ss_pred CcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeec---CCCCCEEEEEeCCCCCCCCC--cee----------eE
Confidence 689964 467899999999999 88889999 9999863 24688999999998653211 112 35
Q ss_pred hccccCCC-CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhh
Q psy6528 222 CRTSTNYS-STRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKE 300 (421)
Q Consensus 222 C~~~~~~~-~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~ 300 (421)
|....... .......|+|+. |+|||||||++.. +++++|+||+|||.+|+.. .+| -.++-+.+++
T Consensus 144 C~~~~~~~~~~~~~~~~~Ca~--------~~GDSGGPlv~~~-~g~~~lvGIvS~G~gc~~~---~~~--~p~~~~~~~~ 209 (218)
T 3cp7_A 144 CHGTATNDPMGSSTQGIPCNM--------TGGSSGGPWFLGN-GTGGAQNSTNSYGYTFLPN---VMF--GPYFGSGAQQ 209 (218)
T ss_dssp EEEECEECTTSSSCEEEECCC--------CTTCTTCEEEESS-SSSSCEEEECCEEETTEEE---EEE--ECCCCHHHHH
T ss_pred eeeeEEcCCCCCceEEecCCC--------CCCCcCCeeEEcc-CCCeEEEEEEccccCCCCC---cEE--cCcCCHHHHH
Confidence 75321100 011334799972 5799999999974 6678999999999998642 222 2334555554
Q ss_pred hc
Q psy6528 301 KS 302 (421)
Q Consensus 301 ~~ 302 (421)
..
T Consensus 210 l~ 211 (218)
T 3cp7_A 210 NY 211 (218)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 97
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.96 E-value=7.7e-30 Score=237.99 Aligned_cols=185 Identities=19% Similarity=0.184 Sum_probs=120.3
Q ss_pred EEEeecCeeEEEEEEEeC------CEEEEccccccCc--ceeeEEEEEeeeeccCCC-----------CCCceeEEEE-E
Q psy6528 85 VRLSYFNRFYCGGTLIND------RYVLTAAHCVKGR--LWFLIKATFGEYDRCDTS-----------SKPESRFVIR-A 144 (421)
Q Consensus 85 v~l~~~~~~~CgGtLIs~------~~VLTAAhC~~~~--~~~~~~v~~G~~~~~~~~-----------~~~~~~~v~~-~ 144 (421)
++|...+.++|||+||++ +||||||||+.+. ....+.|.++.....-.. .......+.. +
T Consensus 26 ~rl~~~g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~i 105 (268)
T 1arb_A 26 GAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPASGANGDGSMSQTQSGSTV 105 (268)
T ss_dssp EEEEETTEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTSGGGGSCCCCCCCCEEECEEE
T ss_pred EEEEeCCccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccccccccccCCcceEEeccceE
Confidence 677777889999999998 6999999998652 233456766643221110 0111122322 3
Q ss_pred EcCCCCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccc--eeEEEeeeechhhh
Q psy6528 145 IVGDFTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACI--IRDVEVPILSNQYC 222 (421)
Q Consensus 145 i~p~y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~--L~~~~~~v~~~~~C 222 (421)
+|+ ...||||||||++|++ .+..++++|||.+......... ++...++.++...|
T Consensus 106 ~h~-----~~~nDIALLrL~~~v~------------------~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l~~i~~~~~ 162 (268)
T 1arb_A 106 KAT-----YATSDFTLLELNNAAN------------------PAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNSTS 162 (268)
T ss_dssp EEE-----ETTTTEEEEEESSCCC------------------GGGCCEEBCEECCSCCCSCEEEEECGGGCSCEEEEECS
T ss_pred ecC-----CCCCceEEEEecCCCC------------------CCCceEEeCcCccCCCCCcceeeccCCcccEEEEeecc
Confidence 345 3579999999999742 2345789999998754321111 12234555566666
Q ss_pred ccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC-CCCCC--CCCeEEEEeceehh
Q psy6528 223 RTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA-GCGRA--GYPGVYTRITRYVE 296 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~-~c~~~--~~p~vyt~V~~y~~ 296 (421)
......+...+.+.|+|++...+..++|+|||||||++.. ++|+||+|||. .|+.. +.|+|||||+.|.+
T Consensus 163 ~~~~~~~~~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~----~~~~Gi~s~g~~~C~~~~~~~p~vyt~v~~~~~ 235 (268)
T 1arb_A 163 PTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPE----KRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWT 235 (268)
T ss_dssp CCEEECTTSSSCSSEEEEECCTTSCCCCTTCTTCEEECTT----SCEEEEEEECSCCTTCCGGGSEEEEEEHHHHHH
T ss_pred ccccccccccccCCeEEEeeecCCCCCccCcccCCcEeeC----CEEEEEEeecCcccCCCCCCCCceEEEeeeeec
Confidence 5211111234678999997542223799999999998732 36999999997 68876 38999999976654
No 98
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.96 E-value=2.7e-29 Score=235.61 Aligned_cols=193 Identities=16% Similarity=0.165 Sum_probs=135.8
Q ss_pred CCCCCCceEEE--Eee---cCeeEEEEEEEeCCEEEEccccccCcc--eeeEEEEEeeeeccCCCCCCceeEEEEEEcCC
Q psy6528 76 TEVNQYPWMVR--LSY---FNRFYCGGTLINDRYVLTAAHCVKGRL--WFLIKATFGEYDRCDTSSKPESRFVIRAIVGD 148 (421)
Q Consensus 76 a~~~~~Pw~v~--l~~---~~~~~CgGtLIs~~~VLTAAhC~~~~~--~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~ 148 (421)
+..++|||++. |.. .+.++|+|+||+++||||||||+.+.. ...+.|++|..+....... ...+.+++...
T Consensus 12 ~~~~~~P~~~~v~l~~~~~~g~~~CgG~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g--~~~~~~i~~~~ 89 (268)
T 1wcz_A 12 TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNG--GFTAEQITKYS 89 (268)
T ss_dssp SCTTSGGGTTEEEEEEEC-CCEEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTC--CEEEEEEEECS
T ss_pred cCCCCCCccEEEEEEEEcCCCCEEEEEEEEECCEEEEChhhCCCccCCcceEEEEecccCcccccCC--cEEEEEEecCC
Confidence 56788899764 543 356899999999999999999996532 2357888988765332222 23344444321
Q ss_pred CCCCCCCCceEEEEECCCc---ccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccc
Q psy6528 149 FTFSNFDNDIALLRLNDRV---PIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv---~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
..+|||||||++++ .|+..++|+||+.. .....+..++++|||.... ..++.....++..
T Consensus 90 -----~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~-~~~~~g~~v~v~Gwg~~~~-----~~~~~~~~g~i~~------ 152 (268)
T 1wcz_A 90 -----GEGDLAIVKFSPNEQNKHIGEVVKPATMSNN-AETQVNQNITVTGYPGDKP-----VATMWESKGKITY------ 152 (268)
T ss_dssp -----SSSCCEEEEECCCTTSCCHHHHSCCCCBCCC-SSCCTTCEEEEEECCTTSS-----TTCEEEEEEEEEE------
T ss_pred -----CCCcEEEEEecCcccccccccccceeecccc-cccCCCCEEEEEECCCCCC-----CceEEeecceEEe------
Confidence 36899999999997 47788999999863 3355689999999996532 1233333333321
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
+...++|.+ .++|+|||||||++.. ++|+||+|||..|+. .+++|+ ++.|++||++.++..
T Consensus 153 -------~~~~~i~~~-----~~~c~GdSGGPLv~~~----g~lvGIvS~G~~~~~--~~~~~~-~~~~~~wI~~~i~~~ 213 (268)
T 1wcz_A 153 -------LKGEAMQYD-----LSTTGGNSGSPVFNEK----NEVIGIHWGGVPNEF--NGAVFI-NENVRNFLKQNIEDI 213 (268)
T ss_dssp -------EETTEEEES-----BCCCTTCTTCEEECTT----SCEEEEEEEEETTTE--EEEEEC-CHHHHHHHHHHCTTC
T ss_pred -------eCCCeEEEe-----cccCCCCccCeEEccC----CEEEEEEeCCccCCc--ceeEEc-CHHHHHHHHHHHHhc
Confidence 124577763 6899999999999632 379999999988874 255555 689999999998764
Q ss_pred e
Q psy6528 306 C 306 (421)
Q Consensus 306 ~ 306 (421)
.
T Consensus 214 ~ 214 (268)
T 1wcz_A 214 N 214 (268)
T ss_dssp C
T ss_pred c
Confidence 3
No 99
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.96 E-value=1.3e-28 Score=231.82 Aligned_cols=193 Identities=16% Similarity=0.166 Sum_probs=134.3
Q ss_pred CCCCCCceEEE--Eee---cCeeEEEEEEEeCCEEEEccccccCcc--eeeEEEEEeeeeccCCCCCCceeEEEEEEcCC
Q psy6528 76 TEVNQYPWMVR--LSY---FNRFYCGGTLINDRYVLTAAHCVKGRL--WFLIKATFGEYDRCDTSSKPESRFVIRAIVGD 148 (421)
Q Consensus 76 a~~~~~Pw~v~--l~~---~~~~~CgGtLIs~~~VLTAAhC~~~~~--~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~ 148 (421)
+..++|||++. |.. .+.++|+|+||+++||||||||+.+.. ...+.|++|..+....... ...+.+++...
T Consensus 12 ~~~~~~P~~~~v~i~~~~~~~~~~C~G~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g--~~~~~~i~~~~ 89 (274)
T 2o8l_A 12 TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNG--GFTAEQITKYS 89 (274)
T ss_dssp SSTTSGGGTTEEEEEEEETTEEEEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTC--CEEEEEEEECS
T ss_pred cCCCCCCcceEEEEEEEcCCCCEEEEEEEEECCEEEEChhhCcccCCCcceEEEEecccCcccccCc--cEEEEEEEeCC
Confidence 56678888754 443 246899999999999999999996532 2347888887654332222 23344444321
Q ss_pred CCCCCCCCceEEEEECCCc---ccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccc
Q psy6528 149 FTFSNFDNDIALLRLNDRV---PIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv---~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
..+|||||||++++ .|+..++|+||+.. .....+..++++|||..... .++......+..
T Consensus 90 -----~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~-~~~~~g~~v~v~Gwg~~~~~-----~~~~~~~g~i~~------ 152 (274)
T 2o8l_A 90 -----GEGDLAIVKFSPNEQNKHIGEVVKPATMSNN-AETQTNQNITVTGYPGDKPV-----ATMWESKGKITY------ 152 (274)
T ss_dssp -----SSSCCEEEEECCCTTSCCTTTSSCCCEECCC-TTCCTTCEEEEEECCTTSST-----TCEEEEEEEEEE------
T ss_pred -----CCCcEEEEEecCccccccccccccccccccc-ccccCCCEEEEEECCCCCCC-----ceEEecCceEEe------
Confidence 36899999999997 47889999999863 34566999999999965321 122222222221
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
+...++|.+ .++|+|||||||++.. ++|+||+|||..|+. .+++|+ ++.|++||++.+...
T Consensus 153 -------~~~~~i~~~-----~~~c~GdSGGPLv~~~----g~lvGIvS~G~~~~~--~~~~~~-~~~~~~wI~~~i~~~ 213 (274)
T 2o8l_A 153 -------LKGEAMQYD-----LSTTGGNSGSPVFNEK----NEVIGIHWGGVPNEF--NGAVFI-NENVRNFLKQNIEDI 213 (274)
T ss_dssp -------EETTEEEES-----CCCCTTCTTCEEECTT----SCEEEEEEEEETTTE--EEEEEC-CHHHHHHHHHHCTTC
T ss_pred -------cCCCeEEeC-----cccCCCCchhheeccC----CeEEEEEeCcccCCC--CceEEe-cHHHHHHHHHHHhhh
Confidence 123467753 6899999999999632 369999999998874 245554 789999999999875
Q ss_pred e
Q psy6528 306 C 306 (421)
Q Consensus 306 ~ 306 (421)
.
T Consensus 214 ~ 214 (274)
T 2o8l_A 214 N 214 (274)
T ss_dssp E
T ss_pred c
Confidence 4
No 100
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.96 E-value=3.5e-29 Score=224.87 Aligned_cols=187 Identities=15% Similarity=0.198 Sum_probs=123.2
Q ss_pred eCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCC
Q psy6528 75 PTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNF 154 (421)
Q Consensus 75 ~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~ 154 (421)
.+..++|||+|++. .++|+|+||+++||||||||+.+.......+.++.... ........+.+++. |+.
T Consensus 7 i~~~~~~P~~v~~~---~~~c~G~lI~~~~VLTaaHcv~~~~~~~~~v~v~~~~~---~~~~~~~~~~~i~~--~~~--- 75 (200)
T 2w7s_A 7 ITDATKEPYNSVVA---FVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSK---GKGGGNYDVKDIVE--YPG--- 75 (200)
T ss_dssp ESCTTSTTGGGEEE---ETTEEEEEEETTEEEECHHHHHHHHHTTCCEEETCCSS---SCCCCEECEEEEEE--CSS---
T ss_pred eeccccCCcccccc---cceEEEEEEECCEEEEChhhcCCcccCCcEEEEEecCc---cCCCcEEEEEEEec--CCC---
Confidence 47789999999885 36799999999999999999964322112344433211 11122233334443 332
Q ss_pred CCceEEEEECCC----cccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCC
Q psy6528 155 DNDIALLRLNDR----VPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSS 230 (421)
Q Consensus 155 ~~DIALlkL~~p----v~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~ 230 (421)
.+|||||||+++ +.|++.++|+||+. ....+..++++||+....... .+.+...+++. +.
T Consensus 76 ~~DiAll~l~~~~~~~~~~~~~v~pi~l~~---~~~~g~~v~v~G~p~g~~~~~----~~~~~~g~v~~--~~------- 139 (200)
T 2w7s_A 76 KEDLAIVHVHETSTEGLNFNKNVSYTKFAD---GAKVKDRISVIGYPKGAQTKY----KMFESTGTINH--IS------- 139 (200)
T ss_dssp SSSCEEEEECSBCTTSCBGGGSCCCCCBCC---CCCTTCEEEEEECTTHHHHTS----CEEEEEEEEEE--EE-------
T ss_pred cceEEEEEECCCCCCcccccccccceeccc---cCCCCCEEEEEECCCCCCCcc----ceEEeEEEEEc--cC-------
Confidence 589999999985 88999999999973 345689999999853111110 13344444443 11
Q ss_pred CCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCC-CCCCeE-EEEeceehhhhhhhcc
Q psy6528 231 TRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGR-AGYPGV-YTRITRYVEWIKEKSK 303 (421)
Q Consensus 231 ~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~-~~~p~v-yt~V~~y~~WI~~~~~ 303 (421)
..++|.. .+.|+|||||||++.+ + .|+||+|||..|+. ...+++ |+ +.|++||+++++
T Consensus 140 ----~~~~~~~-----~~~~~GdSGGPl~~~~--g--~lvGI~s~g~~~~~~~~~~~v~~~--~~~~~wI~~~~~ 199 (200)
T 2w7s_A 140 ----GTFMEFD-----AYAQPGNSGSPVLNSK--H--ELIGILYAGSGKDESEKNFGVYFT--PQLKEFIQNNIE 199 (200)
T ss_dssp ----TTEEEEC-----SCCCTTCTTCEEECTT--S--CEEEEEEEEC----CCCEEEEECC--HHHHHHHHHTSC
T ss_pred ----CCEEEEc-----ceeCCCCccCeEECcC--C--EEEEEEeccccCCCCccceeeecH--HHHHHHHHhhcc
Confidence 3467763 5789999999999632 2 68999999988742 222366 56 899999999875
No 101
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.95 E-value=2.7e-28 Score=219.66 Aligned_cols=185 Identities=15% Similarity=0.207 Sum_probs=122.6
Q ss_pred eCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcce-eeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCC
Q psy6528 75 PTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLW-FLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSN 153 (421)
Q Consensus 75 ~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~ 153 (421)
.+..++|||+|.+.. ++|+|+||+++||||||||+.+... ..+.+..+. . ........+.+++. |+
T Consensus 7 ~~~~~~~P~~~~~~~---~~c~G~lI~~~~VLTaaHcv~~~~~~~~v~v~~~~---~--~~~~~~~~~~~i~~--~~--- 73 (204)
T 2vid_A 7 VKDTNIFPYTGVVAF---KSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNS---D--KGNGGIYSIKKIIN--YP--- 73 (204)
T ss_dssp CSCTTSTTGGGEEEC---SSCEEEEEETTEEEECHHHHTTCCTTCEEEESCCS---S--SCCSCEEEEEEEEE--CS---
T ss_pred eccCCcCchhheEEe---eeEEEEEEECCEEEEChhHCCCccCCceEEEEecc---c--cCCCcEEEeeEEec--CC---
Confidence 377899999997642 4799999999999999999965331 223332111 1 11122233344443 22
Q ss_pred CCCceEEEEECC--------CcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccc
Q psy6528 154 FDNDIALLRLND--------RVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 154 ~~~DIALlkL~~--------pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
..+|||||||++ ++.|++.++|+||+. ....+..++++|||..... ...+ ......+..
T Consensus 74 ~~~DiAll~l~~~~~~~~~~~~~~~~~v~pi~l~~---~~~~g~~~~~~G~g~~~~~---~~~~-~~~~g~v~~------ 140 (204)
T 2vid_A 74 GKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAA---GAKAGERIKVIGYPHPYKN---KYVL-YESTGPVMS------ 140 (204)
T ss_dssp SSSCCEEEEECSEEEEEETTEEEHHHHCCCCCBCS---CCCTTCEEEEEECCCCCC-----CCC-EEEEEEEEE------
T ss_pred CCCeEEEEEEcCcccccccccccccccccccccCC---cCCCCCEEEEEeCCCCCCC---Ccce-EeeccEEee------
Confidence 268999999995 677888899999974 3456899999999975322 1112 111122211
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCC---CCCCCCCeEEEEeceehhhhhhhc
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAG---CGRAGYPGVYTRITRYVEWIKEKS 302 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~---c~~~~~p~vyt~V~~y~~WI~~~~ 302 (421)
+...++|.+ .++|+|||||||++. .+.|+||+|+|.. |...+++.+|+ +.|.+||++++
T Consensus 141 -------~~~~~~~~~-----~~~~~GdSGGPl~~~----~g~lvGI~s~g~~~~~~~~~~~~~~~~--~~~~~wI~~~~ 202 (204)
T 2vid_A 141 -------VEGSSIVYS-----AHTESGNSGSPVLNS----NNELVGIHFASDVKNDDNRNAYGVYFT--PEIKKFIAENI 202 (204)
T ss_dssp -------EETTEEEEC-----CCCCGGGTTCEEECT----TSCEEEEEEEECC---CCCCEEEECCC--HHHHHHHHHHS
T ss_pred -------ccCCeEEEe-----cccCCCCccCcEECC----CCeEEEEEecCccCCCcccccceeEeC--HHHHHHHHhhc
Confidence 124578863 589999999999853 2379999999973 55444433344 88999999987
Q ss_pred c
Q psy6528 303 K 303 (421)
Q Consensus 303 ~ 303 (421)
+
T Consensus 203 ~ 203 (204)
T 2vid_A 203 D 203 (204)
T ss_dssp C
T ss_pred C
Confidence 5
No 102
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.95 E-value=1.2e-27 Score=221.32 Aligned_cols=192 Identities=19% Similarity=0.130 Sum_probs=130.4
Q ss_pred eCCCCCCceEEE--EeecCeeEEEEEEEeCCEEEEccccccCcce--eeEEEEEeeeeccCCC--CCCceeEEEEEEcCC
Q psy6528 75 PTEVNQYPWMVR--LSYFNRFYCGGTLINDRYVLTAAHCVKGRLW--FLIKATFGEYDRCDTS--SKPESRFVIRAIVGD 148 (421)
Q Consensus 75 ~a~~~~~Pw~v~--l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~--~~~~v~~G~~~~~~~~--~~~~~~~v~~~i~p~ 148 (421)
++..++|||++. |...+.++|+|+||+++||||||||+.+... ..+.+..|........ .......+..++++.
T Consensus 35 ~a~~~~~p~~~~v~i~~~~~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~ 114 (242)
T 1agj_A 35 EKDRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEP 114 (242)
T ss_dssp TTGGGSTTGGGEEEEEETTTEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCT
T ss_pred cccccccccceEEEEEECCCccEEEEEEeCCEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCC
Confidence 467889999854 4445678999999999999999999965332 2344444665432111 011223344444432
Q ss_pred CCCCCCCCceEEEEECCCcc---cCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccc
Q psy6528 149 FTFSNFDNDIALLRLNDRVP---IVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTS 225 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~---~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~ 225 (421)
|+ ..+|||||||+.|+. |++.++|+||+.. .....+..++++|||..... ..++...+++++...
T Consensus 115 ~~---~~~DiAll~l~~~~~~~~~~~~v~~i~L~~~-~~~~~g~~~~v~Gwg~~~~~----~~l~~~~~~~~~~~~---- 182 (242)
T 1agj_A 115 FG---AGVDLALIRLKPDQNGVSLGDKISPAKIGTS-NDLKDGDKLELIGYPFDHKV----NQMHRSEIELTTLSR---- 182 (242)
T ss_dssp TC---TTSCCEEEEECCCTTSCCHHHHSCCCEECCS-TTCCTTCEEEEEECCTTTST----TCCEEEEEEECCGGG----
T ss_pred CC---CCCcEEEEEEcCCCccccccccccceecCcc-ccCCCCCEEEEEeCCCCCCC----ccceeeeeeEecCCc----
Confidence 64 479999999999964 6678999999863 34557899999999976432 146666666654321
Q ss_pred cCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCC-CCCCCeEEEEeceehhhh
Q psy6528 226 TNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCG-RAGYPGVYTRITRYVEWI 298 (421)
Q Consensus 226 ~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~-~~~~p~vyt~V~~y~~WI 298 (421)
+++.. .++|+|||||||++.+ ..|+||+|||.+|+ .....++.+.|...+.|+
T Consensus 183 -----------~~~~~-----~~~c~GdSGGPl~~~~----g~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~ 236 (242)
T 1agj_A 183 -----------GLRYY-----GFTVPGNSGSGIFNSN----GELVGIHSSKVSHLDREHQINYGVGIGNYVKRI 236 (242)
T ss_dssp -----------SEEEE-----CCCCGGGTTCEEECTT----SEEEEEEEEEEECSSTTCEEEEEEECCHHHHHH
T ss_pred -----------eEEEe-----CCcCCCCCchHhcccC----CEEEEEEeccccccCcCCCceeeEEehHHHHHH
Confidence 12221 4689999999999632 27999999999997 334457788887544444
No 103
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.92 E-value=6.2e-26 Score=201.11 Aligned_cols=169 Identities=20% Similarity=0.240 Sum_probs=118.5
Q ss_pred eeEEE-EEEEe---CCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECC-C
Q psy6528 92 RFYCG-GTLIN---DRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLND-R 166 (421)
Q Consensus 92 ~~~Cg-GtLIs---~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~-p 166 (421)
...|+ |.++. ++||||||||+.+.. .+.+.. .... .+.......| ..||||||||++ +
T Consensus 11 ~~~ct~Gf~v~~~~~~~ilTaaHcv~~~~--~~~v~~--------~~~~---~~g~~~~~~~----~~~DiAll~l~~~~ 73 (185)
T 2qa9_E 11 TGRCSLGFNVRSGSTYYFLTAGHCTDGAT--TWWANS--------ARTT---VLGTTSGSSF----PNNDYGIVRYTNTT 73 (185)
T ss_dssp SCEEECCEEEEETTEEEEEECHHHHTTCS--EEESST--------TSCS---EEEEEEEEEC----SBSCEEEEEECCSS
T ss_pred CCcEeccEEEEECCceEEEECcccCCCCC--cEEecC--------CCce---EeEEEecccc----CCCCEEEEEecCCC
Confidence 45799 89887 479999999996532 222210 0001 1111222222 368999999999 9
Q ss_pred cccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCC
Q psy6528 167 VPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGM 246 (421)
Q Consensus 167 v~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~ 246 (421)
+.+++.++|++|+.. .....+..+.++||+.. .....|+.+.+++ +...|. . + ..+...|+|+
T Consensus 74 ~~~~~~v~~~~l~~~-~~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v-~~~~~~-~--~--~~~~~~~~ca------ 136 (185)
T 2qa9_E 74 IPKDGTVGGQDITSA-ANATVGMAVTRRGSTTG----THSGSVTALNATV-NYGGGD-V--V--YGMIRTNVCA------ 136 (185)
T ss_dssp SCCCCEETTEECCEE-CCCCTTCEEEEEETTTE----EEEEEEEEEEEEE-ECSTTC-E--E--EEEEEESCCC------
T ss_pred ccccCccceeeeCCc-ccCCCCCEEEEecCCCc----eeEeEEEEEEEEE-EcCCCC-E--E--eceEEecccC------
Confidence 999999999999753 34567899999999642 2345678877775 333342 1 1 1123466775
Q ss_pred CCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhc
Q psy6528 247 KDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKS 302 (421)
Q Consensus 247 ~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~ 302 (421)
|+|||||||++.+ +++||+|||..|+..+.|++|++|+.|++||+..+
T Consensus 137 ---c~GDSGGPlv~~~-----~~vGI~s~g~~~~~~~~p~vyt~v~~~~~wI~~~l 184 (185)
T 2qa9_E 137 ---EPGDSGGPLYSGT-----RAIGLTSGGSGNCSSGGTTFFQPVTEALSAYGVSV 184 (185)
T ss_dssp ---CTTCTTCEEEETT-----EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHTCEE
T ss_pred ---CCCCccceEEECC-----EEEEEEEecCCCCCCCCcEEEEEHHHHHHhhCcEE
Confidence 9999999999742 79999999988877778999999999999998654
No 104
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.91 E-value=1.8e-24 Score=195.67 Aligned_cols=186 Identities=16% Similarity=0.184 Sum_probs=122.9
Q ss_pred CCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcc-eeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCC
Q psy6528 76 TEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRL-WFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNF 154 (421)
Q Consensus 76 a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~-~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~ 154 (421)
+..++|||+|++. .++|+|+||+++||||||||+.+.. ...+.|.+|... .......+.+++. |+ .
T Consensus 9 ~~~~~~P~~v~~~---~~~c~G~lI~~~~VLTaaHcv~~~~~~~~i~v~~~~~~-----~~g~~~~~~~v~~--~~---~ 75 (210)
T 2as9_A 9 KDTNNFPYNGVVS---FKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDK-----GNGGIYKIKSISD--YP---G 75 (210)
T ss_dssp SCTTSTTGGGEEE---CSSCEEEEEETTEEEECHHHHHHCCTTCEEEESCCGGG-----CCSCEEEEEEEEE--CS---S
T ss_pred ecCCcCCeEEEEE---eeeEEEEEEeCCEEEECHhHCCccCCCCEEEEEeCccc-----CCCCEEEEEEEEe--CC---C
Confidence 5578999999874 3679999999999999999996432 124555544311 1122233433443 33 2
Q ss_pred CCceEEEEECC--------CcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcccc
Q psy6528 155 DNDIALLRLND--------RVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTST 226 (421)
Q Consensus 155 ~~DIALlkL~~--------pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~ 226 (421)
.+|||||||+. |+.|++.++|+||+. ....+..++++|||...... ..+ .+...+++..
T Consensus 76 ~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~---~~~~g~~v~v~G~p~~~~~~---~~l-~~~~g~v~~~------ 142 (210)
T 2as9_A 76 DEDISVMNIEEQAVERGPKGFNFNENVQAFNFAK---DAKVDDKIKVIGYPLPAQNS---FKQ-FESTGTIKRI------ 142 (210)
T ss_dssp SSSCEEEEECSEEEEEETTEEEGGGSCCCCCBCS---CCCTTCEEEEEECSSTTTTT---SCC-EEEEEEEEEE------
T ss_pred CCcEEEEEecCccccccccccccccccceeecCC---CCCCCCEEEEEeCCCCCCCC---cce-EEeeeEEccc------
Confidence 68999999988 688899999999973 35578999999998643221 123 4444555432
Q ss_pred CCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEe-ceehhhhhhhccc
Q psy6528 227 NYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRI-TRYVEWIKEKSKE 304 (421)
Q Consensus 227 ~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V-~~y~~WI~~~~~~ 304 (421)
...++|+. .+.|+|||||||++.+ + .|+||+||+......... .|+.+ ....+|+++.-.+
T Consensus 143 -------~~~~i~~~-----~~~~~GdSGGPlv~~~--g--~lvGI~s~g~~~~~~~~~-~~~~~~~~i~~f~~~~~~~ 204 (210)
T 2as9_A 143 -------KDNILNFD-----AYIEPGNSGSPVLNSN--N--EVIGVVYGGIGKIGSEYN-GAVYFTPQIKDFIQKHIEQ 204 (210)
T ss_dssp -------ETTEEEEE-----CCCCTTCTTCEEECTT--S--CEEEEECCSCCCTTCSSE-EEEECCHHHHHHHHTTCCC
T ss_pred -------cCCeEEEc-----CccCCCCccCcEECCC--C--eEEEEEecccccCCcccc-ccEEEcHHHHHHHHHhhhh
Confidence 13578864 4789999999999643 2 689999999763322222 35554 4456666655443
No 105
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.90 E-value=1.7e-23 Score=193.80 Aligned_cols=167 Identities=16% Similarity=0.154 Sum_probs=112.0
Q ss_pred CCCCCCceEEEE--eecCeeEEEEEEEeCCEEEEccccccCcce--eeEEEEEeeeeccC-CC--CCCceeEEEEEEc-C
Q psy6528 76 TEVNQYPWMVRL--SYFNRFYCGGTLINDRYVLTAAHCVKGRLW--FLIKATFGEYDRCD-TS--SKPESRFVIRAIV-G 147 (421)
Q Consensus 76 a~~~~~Pw~v~l--~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~--~~~~v~~G~~~~~~-~~--~~~~~~~v~~~i~-p 147 (421)
+..++|||++.+ ...+.++|+|+||+++||||||||+.+... ..+.+..|...... .. .......+..++. |
T Consensus 29 ~~~~~~P~~~~~~i~~~~~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp 108 (246)
T 1qtf_A 29 TDNARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESP 108 (246)
T ss_dssp SCCSSTTGGGEEEEEETTTEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCT
T ss_pred hhcCcCchhcEEEEEECCCceEEEEEEECCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCC
Confidence 567899999654 455678999999999999999999965433 45677777654321 00 0112333444443 5
Q ss_pred CCCCCCCCCceEEEEECCCc---ccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcc
Q psy6528 148 DFTFSNFDNDIALLRLNDRV---PIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRT 224 (421)
Q Consensus 148 ~y~~~~~~~DIALlkL~~pv---~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~ 224 (421)
|+ ..+|||||+|+.++ .|++.++|+||+.. .....+..++++||+..... +. +....+++.+ .
T Consensus 109 -~~---~~~DiALLkl~~~~~~~~~~~~v~~i~L~~~-~~~~~g~~v~v~G~p~g~~~---~~-~~~~~~~~~~----~- 174 (246)
T 1qtf_A 109 -YG---QGLDLAIIKLKPNEKGESAGDLIQPANIPDH-IDIAKGDKYSLLGYPYNYSA---YS-LYQSQIEMFN----D- 174 (246)
T ss_dssp -TC---TTSCCEEEEECCCTTSCCHHHHSCCCCCCSS-CCCCTTCEEEEEECCTTTST---TC-CEEEEEEESS----S-
T ss_pred -CC---CCCCEEEEEEeCCccccccccceeeeecCCc-cccCCCCEEEEEECCCCCCC---ce-eEeeeeeecC----c-
Confidence 54 47899999999998 67778999999864 34567899999999753221 11 2222333322 0
Q ss_pred ccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCC
Q psy6528 225 STNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAG 278 (421)
Q Consensus 225 ~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~ 278 (421)
.. ...++|+|||||||+..+ + .|+||+||+..
T Consensus 175 -~~-----------------~~~~~~~GdSGGPlv~~~--g--~lvGI~s~g~~ 206 (246)
T 1qtf_A 175 -SQ-----------------YFGYTEVGNSGSGIFNLK--G--ELIGIHSGKGG 206 (246)
T ss_dssp -SB-----------------EESCCCGGGTTCEEECTT--C--CEEEEEEEEET
T ss_pred -EE-----------------EeCCCCCCCchhheECCC--C--EEEEEEecccc
Confidence 00 013689999999999632 2 68999999864
No 106
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=99.89 E-value=1.6e-23 Score=165.29 Aligned_cols=94 Identities=37% Similarity=0.786 Sum_probs=82.2
Q ss_pred CccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCC
Q psy6528 205 PACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGY 284 (421)
Q Consensus 205 ~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~ 284 (421)
.+..|+++.++++++++|++.+. ..++++||||+. .++++|+|||||||++.. +++|+|+||+|||..|+..+.
T Consensus 3 ~~~~L~~~~v~i~~~~~C~~~~~---~~i~~~~iCa~~--~~~~~C~GDSGGPL~~~~-~~~~~l~GIvS~g~~c~~~~~ 76 (97)
T 1yph_E 3 TPDRLQQASLPLLSNTNCKKYWG---TKIKDAMICAGA--SGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCSTST 76 (97)
T ss_dssp CCSBCEEEEEEBCCHHHHHHHHG---GGCCTTEEEEEC--SSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCCTTS
T ss_pred cCccceEEEEEECCHHHhhHHhc---CCCCCceEeecC--CCCCCCcCCCCCcEEEEe-CCeEEEEEEEEeCCCCCCCCC
Confidence 35679999999999999985432 357899999983 347999999999999987 789999999999999988889
Q ss_pred CeEEEEeceehhhhhhhccc
Q psy6528 285 PGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 285 p~vyt~V~~y~~WI~~~~~~ 304 (421)
|++||||++|++||+++++.
T Consensus 77 p~vyt~V~~y~~WI~~~~~~ 96 (97)
T 1yph_E 77 PGVYARVTALVNWVQQTLAA 96 (97)
T ss_dssp EEEEEEHHHHHHHHHHHHHH
T ss_pred CeEEEEHHHhHHHHHHHHcc
Confidence 99999999999999998864
No 107
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.83 E-value=4.2e-21 Score=169.32 Aligned_cols=159 Identities=19% Similarity=0.200 Sum_probs=109.9
Q ss_pred eeEEE-EEEEe---CCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCc
Q psy6528 92 RFYCG-GTLIN---DRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRV 167 (421)
Q Consensus 92 ~~~Cg-GtLIs---~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv 167 (421)
...|+ |.+|+ ++||||||||+.+.. .+.+|..+. +.| ..+|||||||++++
T Consensus 11 ~~~ct~G~~v~~~~~~~vlTaaHc~~~~~----~~~~G~~~~-----------------~~~----~~~DiAlikl~~~~ 65 (181)
T 2sga_A 11 GSRCSLGFNVSVNGVAHALTAGHCTNISA----SWSIGTRTG-----------------TSF----PNNDYGIIRHSNPA 65 (181)
T ss_dssp TEEEECCEEEEETTEEEEEECHHHHTTCS----EETTEEEEE-----------------EEC----SBSCEEEEEESCGG
T ss_pred CCcEeccEEEEECCceEEEECcccCCCCC----ceeecceeC-----------------CcC----CCCCEEEEEccCCC
Confidence 45799 99998 689999999986432 233443320 111 25799999999999
Q ss_pred ccCCCcccc----ccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccC
Q psy6528 168 PIVDIIKPV----CLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYP 243 (421)
Q Consensus 168 ~~s~~v~pi----cLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~ 243 (421)
.+++.|+++ +++........++.+.+.||+... ....++.+.+++ +...+. . + ..+++..
T Consensus 66 ~~~~~v~~i~~~~~~~~~~~~~~~G~~v~~~G~~~~~----t~G~v~~~~~~v-~~~~~~-~--~------~~~i~~~-- 129 (181)
T 2sga_A 66 AADGRVYLYNGSYQDITTAGNAFVGQAVQRSGSTTGL----RSGSVTGLNATV-NYGSSG-I--V------YGMIQTN-- 129 (181)
T ss_dssp GCCCEEECSSSCEEECCEECCCCTTCEEEEEETTTEE----EEEEEEEEEEEE-ECGGGC-E--E------EEEEEES--
T ss_pred cccceEEecCCcceeecccccCCCCCEEEEeecCCCc----cEEEEEEeEEEE-ECCCCC-E--E------eeeEecc--
Confidence 888889998 777533456678999998886421 123466666664 333332 0 0 1133321
Q ss_pred CCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhh
Q psy6528 244 EGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIK 299 (421)
Q Consensus 244 ~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~ 299 (421)
.-+|+|||||||++.+ .++||+||+..|+....|++|++|+.|++|+.
T Consensus 130 ---~c~~~GDSGGPlv~~~-----~~vGI~s~g~~~~~~~~~~v~~~v~~~~~~l~ 177 (181)
T 2sga_A 130 ---VCAQPGDSGGSLFAGS-----TALGLTSGGSGNCRTGGTTFYQPVTEALSAYG 177 (181)
T ss_dssp ---CCCCTTCTTCEEEETT-----EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHT
T ss_pred ---cccCCCCCCCEEEECC-----EEEEEEEeeCCCCcCCCceEEEEHHHHHHhcC
Confidence 2346899999999743 79999999986444467999999999999986
No 108
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=99.82 E-value=5.7e-20 Score=139.48 Aligned_cols=78 Identities=31% Similarity=0.563 Sum_probs=64.3
Q ss_pred cccCeeCCCCCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCC
Q psy6528 70 IVGGQPTEVNQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGD 148 (421)
Q Consensus 70 I~gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~ 148 (421)
|+||+++.+++|||+|+|...+.++|+||||+++||||||||+.+ ...|++|.++........+...+.++ +||+
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGslIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 76 (80)
T 2pka_A 1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKND----NYEVWLGRHNLFENENTAQFFGVTADFPHPG 76 (80)
T ss_dssp CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS----CCEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CCCCEECCCCCCCcEEEEEECCceEEEEEEEcCCEEEECHHHCCC----CcEEEEeeeEcCCCCCCcEEEEEEEEEECcC
Confidence 789999999999999999988889999999999999999999964 24688999887655444455556555 4699
Q ss_pred CCC
Q psy6528 149 FTF 151 (421)
Q Consensus 149 y~~ 151 (421)
|+.
T Consensus 77 y~~ 79 (80)
T 2pka_A 77 FNL 79 (80)
T ss_dssp TTT
T ss_pred CCC
Confidence 975
No 109
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.71 E-value=2e-16 Score=145.31 Aligned_cols=179 Identities=17% Similarity=0.169 Sum_probs=109.7
Q ss_pred CCceEEEEeecC-----eeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCC
Q psy6528 80 QYPWMVRLSYFN-----RFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNF 154 (421)
Q Consensus 80 ~~Pw~v~l~~~~-----~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~ 154 (421)
--|.+|.|.... ...|+|+||+++||||||||+.+. ..+.|.++.. .... +.+. ++ .
T Consensus 40 ~~~svV~I~~~~~~~~~~~~GsG~iI~~~~VlTaaH~v~~~--~~~~V~~~~~----------~~~~-~~v~--~~---~ 101 (237)
T 3k6y_A 40 TEPSVVKIRSLAPRCQKVLEGTGFVISPDRVMTNAHVVAGS--NNVTVYAGDK----------PFEA-TVVS--YD---P 101 (237)
T ss_dssp HGGGEEEEEEEEGGGTEEEEEEEEEEETTEEEECGGGTTTC--SEEEEEETTE----------EEEC-EEEE--EE---T
T ss_pred hcCCEEEEEEEecCCCcceeEEEEEEECCEEEECHHHcCCC--ceEEEEECCc----------EEEE-EEEE--Ec---C
Confidence 458899986542 468999999999999999999653 3456666531 1111 1111 11 1
Q ss_pred CCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCC-C
Q psy6528 155 DNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTR-I 233 (421)
Q Consensus 155 ~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~-~ 233 (421)
.+|||||||+ +..++|++|+. .....+..++++||+.... ..+....+..+....|...+. ... .
T Consensus 102 ~~DiAll~l~-----~~~~~~~~l~~--~~~~~G~~v~v~G~p~g~~-----~~~~~g~v~~~~~~~~~~~~~--~~~~~ 167 (237)
T 3k6y_A 102 SVDVAILAVP-----HLPPPPLVFAA--EPAKTGADVVVLGYPGGGN-----FTATPARIREAIRLSGPDIYG--DPEPV 167 (237)
T ss_dssp TTTEEEEECT-----TCCSCCCCBCS--SCCCTTCEEEEEECGGGCS-----CEEEEEEEEEEEEEEECCTTC--CSSCE
T ss_pred CCCEEEEEeC-----CCCCCceecCC--CCCCCCCEEEEEECCCCCC-----CccceeEEEeeEeeccccccc--CCCcc
Confidence 5799999998 34688999983 4566799999999986422 123333333333333432111 010 1
Q ss_pred CCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhh
Q psy6528 234 SDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEK 301 (421)
Q Consensus 234 ~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~ 301 (421)
...+++. ....|+|||||||+..+ + .++||+|++..... .-+....+....++|++.
T Consensus 168 ~~~~~~~-----~~~~~~GdSGGPLv~~~--G--~vvGI~s~~~~~~~--~~~~aip~~~v~~~l~~~ 224 (237)
T 3k6y_A 168 TRDVYTI-----RADVEQGDSGGPLIDLN--G--QVLGVVFGAAIDDA--ETGFVLTAGEVAGQLAKI 224 (237)
T ss_dssp EEEEEEE-----ESCCCTTCTTCEEECTT--S--CEEEEEEEECSSST--TEEEEEEHHHHHGGGGGT
T ss_pred cccEEEe-----cCccCCCccHHHEECCC--C--EEEEEEEeeccCCC--cEEEEEEHHHHHHHHHHc
Confidence 1123333 25789999999999643 3 58999999764321 124445566666666654
No 110
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=99.65 E-value=4.3e-16 Score=142.98 Aligned_cols=173 Identities=18% Similarity=0.149 Sum_probs=107.8
Q ss_pred eeEEEEEEEeCC-EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCcccC
Q psy6528 92 RFYCGGTLINDR-YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPIV 170 (421)
Q Consensus 92 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~s 170 (421)
...|+|+||+++ ||||||||+.+. ..+.|.++.. ..... +++ .+ ...+|||||||+.++
T Consensus 55 ~~~gsG~iI~~~g~ILTnaHvv~~~--~~i~V~~~~g---------~~~~a-~vv--~~---d~~~DlAllkl~~~~--- 114 (239)
T 1l1j_A 55 ASLGSGFIFDPEGYILTNYHVVGGA--DNITVTMLDG---------SKYDA-EYI--GG---DEELDIAVIKIKASD--- 114 (239)
T ss_dssp EEEEEEEEEETTTEEEEEHHHHSSC--SSCEEECTTS---------CEEEB-CCC--EE---ETTTTEEEEEBCCSS---
T ss_pred CceEEEEEEeCCCEEEEChHHhCCC--CEEEEEECCC---------CEEEE-EEE--EE---cCCCCEEEEEEcCCC---
Confidence 467999999986 999999999653 3455655421 11111 111 11 136899999999875
Q ss_pred CCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCC
Q psy6528 171 DIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSC 250 (421)
Q Consensus 171 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C 250 (421)
..+.|++|+.. .....+..+.++||+..... .+...+++...|.-... ........++|+. ...|
T Consensus 115 ~~~~~~~l~~s-~~~~~G~~v~~iG~p~g~~~--------~vt~Givs~~~r~~~~~-~~~~~~~~~i~td-----a~i~ 179 (239)
T 1l1j_A 115 KKFPYLEFGDS-DKVKIGEWAIAIGNPLGFQH--------TVTVGVVSATNRRIPKP-DGSGYYVGLIQTD-----AAIN 179 (239)
T ss_dssp SCCCCCEECCG-GGCCTTCEEEEEECTTSSSC--------EEEEEEEEEEEEEEECT-TSSCEEEEEEEES-----SCCC
T ss_pred CCCceEEecCc-cCCccccEEEEEECCCCCCC--------cEEEEEEeccccccccC-CCccccCCEEEEC-----CCCC
Confidence 45789999863 33567999999999864211 12223333333320000 0000124578874 5789
Q ss_pred cCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 251 QGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 251 ~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
+|||||||+..+ + .++||+|++..-+....-+....+....+++++.++
T Consensus 180 ~G~SGGPLv~~~--G--~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~ 228 (239)
T 1l1j_A 180 PGNSGGPLLNIH--G--EVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILT 228 (239)
T ss_dssp TTTTTSEEECSS--S--EEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC
T ss_pred CCCccHHhccCC--C--eEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHH
Confidence 999999998543 2 799999998651111123566777777788877764
No 111
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=99.65 E-value=1.7e-15 Score=145.74 Aligned_cols=187 Identities=17% Similarity=0.130 Sum_probs=114.1
Q ss_pred CCceEEEEeec---CeeEEEEEEEeC-CEEEEccccccCcc-------eeeEEEEEeeeeccCCCCCCceeEEEEEEcCC
Q psy6528 80 QYPWMVRLSYF---NRFYCGGTLIND-RYVLTAAHCVKGRL-------WFLIKATFGEYDRCDTSSKPESRFVIRAIVGD 148 (421)
Q Consensus 80 ~~Pw~v~l~~~---~~~~CgGtLIs~-~~VLTAAhC~~~~~-------~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~ 148 (421)
..|++|.|... ....|+|+||++ .||||||||+.+.. ...+.|.++.. ..... +++.
T Consensus 15 ~~~svV~I~~~~~~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g---------~~~~a-~vv~-- 82 (324)
T 1y8t_A 15 VVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDG---------RTAPF-TVVG-- 82 (324)
T ss_dssp HGGGEEEEEEEC----CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTC---------CEECE-EEEE--
T ss_pred hcCcEEEEEEEccCCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCC---------CEEEE-EEEE--
Confidence 46999999763 357899999998 79999999996543 22566766521 11111 2222
Q ss_pred CCCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhcccc-C
Q psy6528 149 FTFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTST-N 227 (421)
Q Consensus 149 y~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~-~ 227 (421)
|+ ..+|||||||+.+ ..+.|++|+.. .....+..+.++||+..... .. ...+++...+.... .
T Consensus 83 ~d---~~~DlAllkl~~~----~~~~~~~l~~~-~~~~~G~~v~~~G~p~g~~~-----~~---~~G~vs~~~~~~~~~~ 146 (324)
T 1y8t_A 83 AD---PTSDIAVVRVQGV----SGLTPISLGSS-SDLRVGQPVLAIGSPLGLEG-----TV---TTGIVSALNRPVSTTG 146 (324)
T ss_dssp CC---TTTTEEEEEECSC----CSCCCCEECCS-TTCCTTCEEEEEECGGGCTT-----EE---EEEEEEEEEEEECC--
T ss_pred eC---CCCCEEEEEECCC----CCCceEEecCc-ccCCCCCEEEEEEcCCCCCC-----cE---eeeEEeeccccccccc
Confidence 22 3689999999987 45789999863 34567999999999542111 11 11122221121000 0
Q ss_pred -CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCC--------CCCCeEEEEeceehhhh
Q psy6528 228 -YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGR--------AGYPGVYTRITRYVEWI 298 (421)
Q Consensus 228 -~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~--------~~~p~vyt~V~~y~~WI 298 (421)
.........++|+. ...|+|||||||+..+ + .++||+|++..-.. ...-+....+....+++
T Consensus 147 ~~g~~~~~~~~i~~d-----~~~~~G~SGGPlv~~~--G--~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l 217 (324)
T 1y8t_A 147 EAGNQNTVLDAIQTD-----AAINPGNSGGALVNMN--A--QLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIA 217 (324)
T ss_dssp -----CCCEEEEEEC-----SCCCTTCTTEEEECTT--S--EEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHH
T ss_pred ccCcccccCCEEEEc-----CCCCCCCccCcEECCC--C--eEEEEEeeecccCcccccccccccceEEecCHHHHHHHH
Confidence 00011345689974 5789999999999643 2 79999999754211 11235566777777777
Q ss_pred hhhcc
Q psy6528 299 KEKSK 303 (421)
Q Consensus 299 ~~~~~ 303 (421)
++.++
T Consensus 218 ~~l~~ 222 (324)
T 1y8t_A 218 DELIS 222 (324)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 112
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=99.64 E-value=1.1e-15 Score=139.84 Aligned_cols=179 Identities=16% Similarity=0.186 Sum_probs=104.1
Q ss_pred CceEEEEeecCe----------eEEEEEEEeCC-EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCC
Q psy6528 81 YPWMVRLSYFNR----------FYCGGTLINDR-YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDF 149 (421)
Q Consensus 81 ~Pw~v~l~~~~~----------~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y 149 (421)
-|.+|.|..... ..++|+||+++ ||||||||+.+. ..+.|.++. ...... +++..
T Consensus 41 ~~sVV~I~~~~~~~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~--~~i~V~~~~---------g~~~~a-~v~~~-- 106 (231)
T 3tjo_A 41 APAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTNK--HRVKVELKN---------GATYEA-KIKDV-- 106 (231)
T ss_dssp GGGEEEEEEEEECTTSSCEEEEEEEEEEECSTTCEEEEETTTCCSS--SEEEEECTT---------SCEEEE-EEEEE--
T ss_pred cCcEEEEEEEeccccCCCccccceEEEEEEeCCCEEEEchhcccCC--ceEEEEcCC---------CCEEEE-EEEEe--
Confidence 467777754321 57999999998 999999999753 334554421 111111 12211
Q ss_pred CCCCCCCceEEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCC
Q psy6528 150 TFSNFDNDIALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYS 229 (421)
Q Consensus 150 ~~~~~~~DIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~ 229 (421)
...+|||||||+.+. .+.|++|+.. .....|..++++||+.... ..+....+.-.....+.. ..
T Consensus 107 ---d~~~DlAlL~l~~~~----~~~~~~l~~~-~~~~~G~~v~~~G~p~g~~-----~~~~~g~vs~~~~~~~~~--~~- 170 (231)
T 3tjo_A 107 ---DEKADIALIKIDHQG----KLPVLLLGRS-SELRPGEFVVAIGSPFSLQ-----NTVTTGIVSTTQRGGKEL--GL- 170 (231)
T ss_dssp ---ETTTTEEEEECCCSS----CCCCCCBCCG-GGCCTTCEEEEEEEEETTE-----EEEEEEEEEECC-----------
T ss_pred ---cCCCCEEEEEecCCC----CCCceecCCc-CCCCCCCEEEEEECCCCCC-----CceeeEEEeecccccccc--cc-
Confidence 125799999999763 3568888754 3456699999999986321 112222222221111110 00
Q ss_pred CCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 230 STRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 230 ~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
......++|+. ...|+|||||||+..+ + .++||+||+..++ -+....+....+|+++..+
T Consensus 171 -~~~~~~~i~~d-----a~i~~G~SGGPLv~~~--G--~vVGI~s~~~~~g----~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 171 -RNSDMDYIQTD-----AIINYGNAGGPLVNLD--G--EVIGINTLKVTAG----ISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp ------CCEEES-----SCCCTTTTTSEEECTT--S--CEEEEEEEEEETT----EEEEEEHHHHHHHHHHHHT
T ss_pred -CCCcccEEEEc-----CCcCCCCchhHeecCC--C--eEEEEEeEEecCC----eEEEEEHHHHHHHHHHHhh
Confidence 01112345543 4689999999998533 3 5899999986532 2455666777777766543
No 113
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=99.60 E-value=9.6e-15 Score=141.67 Aligned_cols=173 Identities=14% Similarity=0.184 Sum_probs=110.6
Q ss_pred eEEEEEEEeCC-EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCcccCC
Q psy6528 93 FYCGGTLINDR-YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPIVD 171 (421)
Q Consensus 93 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~s~ 171 (421)
..|+|+||+++ ||||||||+.+. ..+.|.++. ...... +++.. ...+|||||||+.|- .
T Consensus 53 g~GSG~iI~~~G~IlT~aHvv~~~--~~i~V~~~~---------g~~~~a-~~v~~-----d~~~DlAlLkl~~~~---~ 112 (348)
T 3qo6_A 53 GSGSGFVWDKQGHIVTNYHVIRGA--SDLRVTLAD---------QTTFDA-KVVGF-----DQDKDVAVLRIDAPK---N 112 (348)
T ss_dssp EEEEEEEEETTTEEEECHHHHTTC--SEEEEECTT---------SCEEEE-EEEEE-----EGGGTEEEEECCCCG---G
T ss_pred ceEEEEEEeCCCEEEECHHHhCCC--cEEEEEECC---------CCEEEE-EEEEE-----cCcCCEEEEEEcCCC---C
Confidence 47999999998 999999999753 334554421 111111 12211 124799999999872 4
Q ss_pred CccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCc
Q psy6528 172 IIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQ 251 (421)
Q Consensus 172 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~ 251 (421)
.+.|++|+.. .....|..++++||+..... .+....+..+....|.... ......+++.. ...|+
T Consensus 113 ~~~~i~l~~s-~~~~~G~~v~~iG~p~g~~~-----~~~~g~vs~~~~~~~~~~~----~~~~~~~i~~d-----a~i~~ 177 (348)
T 3qo6_A 113 KLRPIPVGVS-ADLLVGQKVFAIGNPFGLDH-----TLTTGVISGLRREISSAAT----GRPIQDVIQTD-----AAINP 177 (348)
T ss_dssp GCCCCCBCCS-TTCCTTCEEEEEECGGGCTT-----EEEEEEEEEEEEEECCSSS----SSCEEEEEEEC-----SCCCT
T ss_pred CceeEEecCc-ccCCCCCEEEEEECCCCCCC-----cEeEEEEEeeccccccccC----CCcccCEEEEe-----CCcCC
Confidence 5789999864 34567999999999864322 2333334333333332110 00112334432 57899
Q ss_pred CCCCCeeEEEecCCceEEEEEEEeCCC-CCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 252 GDSGGPMVFEREDSRYEQIGIVSWGAG-CGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 252 GDsGgPL~~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
|||||||+..+ | .++||+|++.. ++.....+.+..+....+||++.++.
T Consensus 178 G~SGGPLvn~~--G--~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~ 227 (348)
T 3qo6_A 178 GNSGGPLLDSS--G--TLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRF 227 (348)
T ss_dssp TCTTCEEECTT--S--CEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHH
T ss_pred CCcHHHhhCCC--C--eEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhC
Confidence 99999998643 3 58999999764 33334567888999999999988763
No 114
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=99.55 E-value=2.7e-14 Score=137.19 Aligned_cols=165 Identities=17% Similarity=0.163 Sum_probs=104.6
Q ss_pred eEEEEEEEeCC-EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCcccCC
Q psy6528 93 FYCGGTLINDR-YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPIVD 171 (421)
Q Consensus 93 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~s~ 171 (421)
..|+|++|+++ ||||+|||+.+. ..+.|.++. . ..... +++. ++ ..+||||||++.+.
T Consensus 47 ~~gsG~iI~~~G~IlT~aHvv~~~--~~i~V~~~~--------g-~~~~a-~v~~--~d---~~~DlAllkl~~~~---- 105 (325)
T 1lcy_A 47 SNGSGFVVAADGLIVTNAHVVADR--RRVRVRLLS--------G-DTYEA-VVTA--VD---PVADIATLRIQTKE---- 105 (325)
T ss_dssp EEEEEEEEETTTEEEECHHHHTTC--SEEEEECTT--------S-CEEEE-EEEE--EE---TTTTEEEEECCCSS----
T ss_pred ccEEEEEEeCCCEEEECHHHcCCC--CEEEEEeCC--------C-CEEEE-EEEE--EC---CCCCEEEEEEcCCC----
Confidence 68999999998 999999999763 345565532 1 11111 2222 22 36899999998763
Q ss_pred CccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCc
Q psy6528 172 IIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQ 251 (421)
Q Consensus 172 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~ 251 (421)
.+.|++|+.. .....+..+.++||+.... +.+...+++...|.... +........++|+. ...|+
T Consensus 106 ~~~~~~l~~~-~~~~~G~~v~~~G~p~~~~--------~~v~~G~vs~~~~~~~~-~g~~~~~~~~i~~d-----~~~~~ 170 (325)
T 1lcy_A 106 PLPTLPLGRS-ADVRQGEFVVAMGSPFALQ--------NTITSGIVSSAQRPARD-LGLPQTNVEYIQTD-----AAIDF 170 (325)
T ss_dssp CCCCCCBCCG-GGCCTTCEEEECCCTTSSS--------SCCEEEEBCSCSCC----------CCCCEEES-----SCCST
T ss_pred CCceEEeccc-ccCCCCCEEEEEECCCCCC--------CcEEeEEEecccccccc-cCCCCCCCCEEEEc-----CCCCC
Confidence 4678888763 3456689999999986432 12345566666674211 11112356789984 46899
Q ss_pred CCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhh
Q psy6528 252 GDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEK 301 (421)
Q Consensus 252 GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~ 301 (421)
|||||||+..+ + .++||++++... .-+....+....+++++.
T Consensus 171 G~SGGPl~~~~--G--~vVGI~s~~~~~----g~~~aip~~~i~~~l~~~ 212 (325)
T 1lcy_A 171 GNAGGPLVNLD--G--EVIGVNTMKVTA----GISFAIPSDRLREFLHRG 212 (325)
T ss_dssp TTTTSEEEETT--S--CEEEEEEEEEET----TEEEEEEHHHHHHHTCC-
T ss_pred CCccccEECCC--C--EEEEEEeEeecC----CeeEEEEHHHHHHHHHHh
Confidence 99999999643 3 689999997531 124455555555666554
No 115
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=99.53 E-value=1.3e-13 Score=132.11 Aligned_cols=169 Identities=14% Similarity=0.126 Sum_probs=105.8
Q ss_pred eeEEEEEEEeCC-EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCcccC
Q psy6528 92 RFYCGGTLINDR-YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPIV 170 (421)
Q Consensus 92 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~s 170 (421)
...|+|+||+++ ||||||||+.+.. .+.|.++. . ... ..+++. |+ ..+||||||++.+
T Consensus 41 ~~~gsG~iI~~~G~IlT~aHvv~~~~--~i~V~~~~--------g-~~~-~a~v~~--~d---~~~DlAllk~~~~---- 99 (318)
T 1te0_A 41 RTLGSGVIMDQRGYIITNKHVINDAD--QIIVALQD--------G-RVF-EALLVG--SD---SLTDLAVLIIKAT---- 99 (318)
T ss_dssp EEEEEEEECSTTCEEEEEHHHHTTCS--EEEEECTT--------S-CEE-EEEEEE--EE---TTTTEEEEECCCS----
T ss_pred CccEEEEEEeCCCEEEECHHHcCCCC--EEEEEeCC--------C-CEE-EEEEEE--eC---CCceEEEEEEeCC----
Confidence 478999999998 9999999997543 34554431 1 111 122222 22 3689999999876
Q ss_pred CCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCC
Q psy6528 171 DIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSC 250 (421)
Q Consensus 171 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C 250 (421)
..+.|++|+.. .....+..++++||..... ..+...+++..... .. .......++|+. ...|
T Consensus 100 ~~~~~~~l~~~-~~~~~G~~v~~~G~p~g~~--------~~~~~g~vs~~~~~-~~---~~~~~~~~i~~d-----~~~~ 161 (318)
T 1te0_A 100 GGLPTIPINAR-RVPHIGDVVLAIGNPYNLG--------QTITQGIISATGRI-GL---NPTGRQNFLQTD-----ASIN 161 (318)
T ss_dssp SCCCCCCCCTT-CCCCTTCEEEEECCCSSSS--------CCEEEEEEEECCCC-CC---CTTCSCCSEEES-----SCCC
T ss_pred CCCceEEeeCc-cCCCCCCEEEEEEcCCCCC--------CcEEeeEEeccccc-cc---CCCCcCCEEEEC-----CCCC
Confidence 34678888753 3456799999999754211 11223333322211 01 111235688873 4789
Q ss_pred cCCCCCeeEEEecCCceEEEEEEEeCCCCC----CCCCCeEEEEeceehhhhhhhcc
Q psy6528 251 QGDSGGPMVFEREDSRYEQIGIVSWGAGCG----RAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 251 ~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~----~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
+|||||||+..+ + .++||++++..-. ....-+....+.....++++.++
T Consensus 162 ~G~SGGPl~~~~--G--~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 214 (318)
T 1te0_A 162 HGNSGGALVNSL--G--ELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIR 214 (318)
T ss_dssp TTTTTSEEECTT--C--CEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHH
T ss_pred CCCCcCceECCC--C--eEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHH
Confidence 999999999643 3 5899999986431 11223566777777788877654
No 116
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.52 E-value=4e-13 Score=123.17 Aligned_cols=168 Identities=13% Similarity=0.102 Sum_probs=100.7
Q ss_pred eEEEEEEEeCC-EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCcccCC
Q psy6528 93 FYCGGTLINDR-YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPIVD 171 (421)
Q Consensus 93 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~s~ 171 (421)
..++|+||+++ ||||||||+.+. ..+.|.+.. ...... +++. ++ ..+||||||++.+.
T Consensus 53 ~~GsG~ii~~~G~IlTaaHvv~~~--~~~~V~~~~---------g~~~~a-~vv~--~d---~~~DlAll~l~~~~---- 111 (237)
T 3lgi_A 53 TLGSGVIMDQRGYIITNKHVINDA--DQIIVALQD---------GRVFEA-LLVG--SD---SLTDLAVLKINATG---- 111 (237)
T ss_dssp EEEEEEEEETTTEEEEEHHHHTTC--SEEEEECTT---------SCEEEE-EEEE--EE---TTTTEEEEECCCSS----
T ss_pred eEEEEEEEeCCCEEEEeeeecCCC--CEEEEEeCC---------CCEEEE-EEEE--Ec---CCCCEEEEEecCCC----
Confidence 47999999998 999999999754 234454321 111111 1222 11 24799999998764
Q ss_pred CccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCc
Q psy6528 172 IIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQ 251 (421)
Q Consensus 172 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~ 251 (421)
.+.|++|+.. .....|..++++||+.... ..+....+..+....+. ......+++.. ...|+
T Consensus 112 ~~~~~~l~~~-~~~~~G~~v~~~G~p~~~~-----~~~~~g~vs~~~~~~~~-------~~~~~~~i~~d-----~~i~~ 173 (237)
T 3lgi_A 112 GLPTIPINAR-RVPHIGDVVLAIGNPYNLG-----QTITQGIISATGRIGLN-------PTGRQNFLQTD-----ASINH 173 (237)
T ss_dssp CCCCCCCCTT-CCCCTTBEEEEEECGGGSC-----SEEEEEEEEEECCSSCC-------TTSCSCCEEEC-----SCCCT
T ss_pred CCceEeccCc-ccCCCCCEEEEEECCCCCC-----CcEEEEEEEeccccccc-------CCCcCCEEEEc-----CccCC
Confidence 3568888753 4456799999999986422 12223333322222221 01123345542 46799
Q ss_pred CCCCCeeEEEecCCceEEEEEEEeCCCCCC----CCCCeEEEEeceehhhhhhhcc
Q psy6528 252 GDSGGPMVFEREDSRYEQIGIVSWGAGCGR----AGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 252 GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~----~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
|||||||+..+ | .++||+|++..... ...-+....+....+++++.++
T Consensus 174 G~SGGPlv~~~--G--~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~ 225 (237)
T 3lgi_A 174 GNSGGALVNSL--G--ELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIR 225 (237)
T ss_dssp TCTTCEEECTT--C--CEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHH
T ss_pred CCchHHeeCCC--C--eEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHH
Confidence 99999999642 3 58999999764321 1112445566666777776655
No 117
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=99.50 E-value=3e-13 Score=130.29 Aligned_cols=165 Identities=16% Similarity=0.177 Sum_probs=95.6
Q ss_pred eEEEEEEEeCC-EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEE-EcCCCCCCCCCCceEEEEECCCcccC
Q psy6528 93 FYCGGTLINDR-YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRA-IVGDFTFSNFDNDIALLRLNDRVPIV 170 (421)
Q Consensus 93 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~-i~p~y~~~~~~~DIALlkL~~pv~~s 170 (421)
..++|+||+++ ||||||||+.+. ..+.|.++. ........+ .++ .+|||||+|+.+
T Consensus 46 ~~GSG~iI~~~G~ILTaaHvv~~~--~~i~V~~~~---------g~~~~a~~~~~d~-------~~DlAlL~l~~~---- 103 (332)
T 3num_A 46 ASGSGFIVSEDGLIVTNAHVVTNK--HRVKVELKN---------GATYEAKIKDVDE-------KADIALIKIDHQ---- 103 (332)
T ss_dssp EEEEEEEEETTTEEEECTTTCCTT--SEEEEEETT---------SCEEEEEEEEEET-------TTTEEEEEECCS----
T ss_pred eeEEEEEEeCCCEEEEChHHcCCC--CEEEEEECC---------CCEEEEEEEEecC-------CCCeEEEEEcCC----
Confidence 57999999998 999999999753 345555432 111112111 112 479999999976
Q ss_pred CCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCC
Q psy6528 171 DIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSC 250 (421)
Q Consensus 171 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C 250 (421)
..+.+++|+.. .....|..++++||+..... .+....+.......+... + ......+++.. ...|
T Consensus 104 ~~~~~~~l~~~-~~~~~G~~v~~~G~p~g~~~-----~~~~g~vs~~~~~~~~~~--~--~~~~~~~i~~d-----~~i~ 168 (332)
T 3num_A 104 GKLPVLLLGRS-SELRPGEFVVAIGSPFSLQN-----TVTTGIVSTTQRGGKELG--L--RNSDMDYIQTD-----AIIN 168 (332)
T ss_dssp SCCCCCCBCCT-TSCCTTCEEEEECC-----C-----CEEEEEEEEC------------------CCEEES-----SCCC
T ss_pred CCCceeeecCc-ccCCCCCEEEEEECCCCCCc-----ceeeeEEEeecccccccC--c--CCCcCCEEEEE-----CCcC
Confidence 33667888753 34566999999999863221 122222222222222110 0 01112345542 4578
Q ss_pred cCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhc
Q psy6528 251 QGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKS 302 (421)
Q Consensus 251 ~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~ 302 (421)
+|||||||+..+ | .++||+|++...+ -+....+.....++++.+
T Consensus 169 ~G~SGGPlv~~~--G--~vvGI~s~~~~~g----~~~aip~~~i~~~l~~~~ 212 (332)
T 3num_A 169 YGNAGGPLVNLD--G--EVIGINTLKVTAG----ISFAIPSDKIKKFLTESH 212 (332)
T ss_dssp TTTTTSEEEETT--S--CEEEEEEEEEETT----EEEEEEHHHHHHHHHHHC
T ss_pred CCCcHHHhhCCC--C--cEEEEEeeEeccc----ceEEECHHHHHHHHHHHh
Confidence 899999999643 3 5899999986532 255566666777777654
No 118
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.49 E-value=1.7e-13 Score=120.84 Aligned_cols=163 Identities=20% Similarity=0.180 Sum_probs=99.3
Q ss_pred CeeEEE-EEEEeC---CEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCC
Q psy6528 91 NRFYCG-GTLIND---RYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDR 166 (421)
Q Consensus 91 ~~~~Cg-GtLIs~---~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~p 166 (421)
+...|+ |.++++ .+||||+||+.+.. . +.++ . ..+ .+-...-..| ..+|||||||+.+
T Consensus 10 ~~~~CT~Gfiv~~~g~~~ilT~~Hv~~~~~--~--v~~~------~--~~~--~~g~~~~~~~----~~~DiAlikl~~~ 71 (187)
T 1hpg_A 10 GGSRCSAAFNVTKGGARYFVTAGHCTNISA--N--WSAS------S--GGS--VVGVREGTSF----PTNDYGIVRYTDG 71 (187)
T ss_dssp TTEEEECCEEEEETTEEEEEECHHHHTTCS--E--EESS------T--TCC--EEEEEEEEEC----SBSCEEEEEECSS
T ss_pred CCCcCcceEEEEECCeeEEEECcccCCCCC--e--EEeC------C--Cce--eEEEEeCccC----CCCCEEEEEeCCC
Confidence 346799 888877 49999999996532 1 2111 0 001 1111111122 1479999999987
Q ss_pred cccCCCccc-----cccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEec
Q psy6528 167 VPIVDIIKP-----VCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAG 241 (421)
Q Consensus 167 v~~s~~v~p-----icLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~ 241 (421)
+.+.+.+.. +.+... .....++.+..+||... .....+..+...+.-. .. ....|+|+.
T Consensus 72 ~~~~~~v~~~~g~~~~i~~~-~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~~~----------~~-~~~~~i~t~ 135 (187)
T 1hpg_A 72 SSPAGTVDLYNGSTQDISSA-ANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVNYG----------DG-PVYNMVRTT 135 (187)
T ss_dssp CCCCSEEECSSSCEEECCEE-CCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEET----------TE-EEEEEEEEC
T ss_pred CCcCceEEecCCceeeeccc-cCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEEeC----------CC-eEeeeEEec
Confidence 665443321 333322 34566889999998632 1122333333332100 01 134588974
Q ss_pred cCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCC-CCCCCCCeEEEEeceehhhh
Q psy6528 242 YPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAG-CGRAGYPGVYTRITRYVEWI 298 (421)
Q Consensus 242 ~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~V~~y~~WI 298 (421)
...|+|||||||++.. .++||+|++.. |.. ..|++|++|..+++.+
T Consensus 136 -----~~~~~GdSGgpl~~~~-----~~vGi~s~~~~~~~~-~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 136 -----ACSAGGDSGGAHFAGS-----VALGIHSGSSGCSGT-AGSAIHQPVTEALSAY 182 (187)
T ss_dssp -----CCCCTTCTTCEEEETT-----EEEEEEEEESCCBTT-BCCCEEEEHHHHHHHH
T ss_pred -----cccCCCCCCCeEEECC-----EEEEEEEeeCCCCCC-CCceEEEEHHHHHHHc
Confidence 4688999999999742 79999999976 653 5799999999887655
No 119
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.44 E-value=1e-13 Score=122.31 Aligned_cols=160 Identities=18% Similarity=0.214 Sum_probs=95.4
Q ss_pred cCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCccc
Q psy6528 90 FNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPI 169 (421)
Q Consensus 90 ~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~ 169 (421)
.+...|+.-.+-..+||||+||+..... +.+ . + -+++..+| ..+|||||||+.+..+
T Consensus 12 ~~~~~CT~Gf~~~~~ilTa~Hc~~~~~~----v~~-----~---d-------g~v~~~~~----~~~DiAlikl~~~~~~ 68 (189)
T 2ea3_A 12 GGRSRCSIGFAVNGGFITAGHCGRTGAT----TAN-----P---T-------GTFAGSSF----PGNDYAFVRTGAGVNL 68 (189)
T ss_dssp TTEEEEECCEEETTEEEECGGGCCTTCE----EET-----T---T-------EEEEEEEC----SBSCEEEEEECTTCEE
T ss_pred CCCCCCccCEEccCeEEEchhcCCCCCE----EEe-----C---C-------cEEEeeCC----CCCCEEEEEECCCCcc
Confidence 4557899666666699999999865321 211 0 0 11222222 2579999999998777
Q ss_pred CCCcc-----ccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCC
Q psy6528 170 VDIIK-----PVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPE 244 (421)
Q Consensus 170 s~~v~-----picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~ 244 (421)
++.++ +++|+.. .....++.+. .||++.. +....+..++...+-..... ..+...++|+.
T Consensus 69 ~~~v~~~~g~~v~l~~s-~~~~vG~~v~--~~G~~tG-------~t~G~Vs~~~~~v~~~~~~~--~~~~~~~~~~~--- 133 (189)
T 2ea3_A 69 LAQVNNYSGGRVQVAGH-TAAPVGSAVC--RSGSTTG-------WHCGTITALNSSVTYPEGTV--RGLIRTTVCAE--- 133 (189)
T ss_dssp EEEEECSSSCEEECCBC-CCCCTTCEEE--EEETTTE-------EEEEEEEEEEEEEEETTEEE--EEEEEESCCCC---
T ss_pred ccceEecCCceeecCCC-cCCCCCCEEE--EEEeCCc-------cEEEEEEecceEEEeCCccC--cceEEeeeecc---
Confidence 76665 6777653 3344566544 4554311 33333333333222100000 01222345542
Q ss_pred CCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCC-CCCCCCCeEEEEeceehhhhh
Q psy6528 245 GMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAG-CGRAGYPGVYTRITRYVEWIK 299 (421)
Q Consensus 245 ~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~V~~y~~WI~ 299 (421)
+|||||||++.. .++||+|++.. |.. ..|++|++|..+++|..
T Consensus 134 ------~GDSGgpl~~~~-----~~vGi~s~~~~~c~~-~~~~~~~pi~~~l~~~g 177 (189)
T 2ea3_A 134 ------PGDSGGSLLAGN-----QAQGVTSGGSGNCRT-GGTTFFQPVNPILQAYG 177 (189)
T ss_dssp ------TTCTTCEEEETT-----EEEEEEEEEEEETTT-EEEEEEEEHHHHHHHHT
T ss_pred ------CCCccCeEEECC-----EEEEEEeecCCCCCC-CCcEEEEEHHHHHHHCC
Confidence 799999999632 78999999876 543 46899999999988873
No 120
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=99.38 E-value=1e-11 Score=114.00 Aligned_cols=169 Identities=18% Similarity=0.149 Sum_probs=95.5
Q ss_pred eeEEEEEEEeCC--EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCccc
Q psy6528 92 RFYCGGTLINDR--YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPI 169 (421)
Q Consensus 92 ~~~CgGtLIs~~--~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~ 169 (421)
...++|+||+++ ||||+|||+.+. ..+.|.+.. ...... +++.. ...+||||||++.+.
T Consensus 62 ~~~GSGfiI~~~~G~IlTnaHvv~~a--~~i~V~~~d---------g~~~~a-~vv~~-----d~~~DlAlLkv~~~~-- 122 (245)
T 3sti_A 62 EGLGSGVIINASKGYVLTNNHVINQA--QKISIQLND---------GREFDA-KLIGS-----DDQSDIALLQIQNPS-- 122 (245)
T ss_dssp --CCEEEEEETTTTEEEECGGGC------CEEEECTT---------SCEEEE-EEEEE-----ETTTTEEEEEESSCC--
T ss_pred cceEEEEEEeCCCCEEEEcHHHhCCC--CEEEEEECC---------CCEEEE-EEEEe-----cCCCCEEEEEeccCC--
Confidence 357999999998 999999999753 334554421 111111 22221 125799999998653
Q ss_pred CCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCC
Q psy6528 170 VDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDS 249 (421)
Q Consensus 170 s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~ 249 (421)
.+.++.|... .....|..++++||...... .+..-+++...+. .. .......++|+. ...
T Consensus 123 --~~~~~~l~~s-~~~~~G~~v~aiG~P~g~~~--------~vt~G~vs~~~~~-~~---~~~~~~~~i~td-----a~i 182 (245)
T 3sti_A 123 --KLTQIAIADS-DKLRVGDFAVAVGNPFGLGQ--------TATSGIVSALGRS-GL---NLEGLENFIQTD-----ASI 182 (245)
T ss_dssp --SCCCCCBCCG-GGCCTTBEEEEEECGGGSCC--------EEEEEEEEECSSC-SS---CCTTCSSCEEES-----SCC
T ss_pred --CCceeeecCc-CCCCCCCEEEEEECCCCCCC--------cEEeeEEeeeccc-cc---CCCCccCEEEEc-----CCc
Confidence 3567778753 34567999999998542211 1222233332222 01 011224567763 467
Q ss_pred CcCCCCCeeEEEecCCceEEEEEEEeCCCCCC-CCCCeEEEEeceehhhhhhhcc
Q psy6528 250 CQGDSGGPMVFEREDSRYEQIGIVSWGAGCGR-AGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 250 C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~-~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
|+|+|||||+..+ | .++||+|+...... ...-+....+....+++++.++
T Consensus 183 ~~G~SGGPLvn~~--G--~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~ 233 (245)
T 3sti_A 183 NRGNSGGALLNLN--G--ELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLID 233 (245)
T ss_dssp CTTTTTSEEECTT--S--CEEEEEECCC------CCCEEEEEHHHHHHHHHHHHH
T ss_pred CCCcchhHeecCC--C--eEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHH
Confidence 9999999998533 3 69999999765321 1122444555666666666654
No 121
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.23 E-value=1.6e-11 Score=107.81 Aligned_cols=154 Identities=21% Similarity=0.352 Sum_probs=84.2
Q ss_pred eEEE-EEEEeC---CEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCcc
Q psy6528 93 FYCG-GTLIND---RYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVP 168 (421)
Q Consensus 93 ~~Cg-GtLIs~---~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~ 168 (421)
..|+ |.++++ .+||||+||+..... +.+ . .-.+ +-..| ..+|+|||||+.+..
T Consensus 14 ~~CT~Gf~v~~~~~~~ilTa~Hc~~~g~~--v~~-------------~-~g~v---~~~~~----~~~D~Alikl~~~~~ 70 (186)
T 2pfe_A 14 YRCSIGFSVRQGSQTGFATAGHCGSTGTR--VSS-------------P-SGTV---AGSYF----PGRDMGWVRITSADT 70 (186)
T ss_dssp EEEECCEEEEETTEEEEEECGGGCCTTCE--EBT-------------T-TEEE---EEEEC----SBSCEEEEEECTTSE
T ss_pred CcEEeeEEEEcCCeeEEEEChhhCCCCCE--EEE-------------e-eEEE---EecCC----CCCCEEEEEeCCCcc
Confidence 5688 777754 599999999965321 111 0 0011 11011 257999999998876
Q ss_pred cCCCcc-----ccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccC
Q psy6528 169 IVDIIK-----PVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYP 243 (421)
Q Consensus 169 ~s~~v~-----picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~ 243 (421)
.++.+. ++.+... .....++.+...|.-. +............+.. .... + ..+...++|++
T Consensus 71 ~~~~v~~~~g~~~~i~~~-~~~~vG~~vc~~G~~t----G~t~G~vs~~~~tv~~---~~~~--~--~~~~~~~~c~~-- 136 (186)
T 2pfe_A 71 VTPLVNRYNGGTVTVTGS-QEAATGSSVCRSGATT----GWRCGTIQSKNQTVRY---AEGT--V--TGLTRTTACAE-- 136 (186)
T ss_dssp EEEEEECSSSCEEECCBC-CCCCTTCEEEEEETTT----EEEEEEEEEEEEEEEE---TTEE--E--EEEEEESCCCC--
T ss_pred cccceeccCCceEecCCC-CCCCCCCeEEEEEeCC----ceEEEEEEEEeeeEEe---CCce--E--eceEeccEEec--
Confidence 555554 4445432 3345566544444311 0001112222222210 0100 0 01233456753
Q ss_pred CCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCC-CCCCCCCeEEEEeceehh
Q psy6528 244 EGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAG-CGRAGYPGVYTRITRYVE 296 (421)
Q Consensus 244 ~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~V~~y~~ 296 (421)
+|||||||++.. .++||+||+.. |.. ..|++|++|...++
T Consensus 137 -------~GDSGgpl~~~~-----~~vGi~s~g~~~c~~-~~~~~~~pi~~~l~ 177 (186)
T 2pfe_A 137 -------GGDSGGPWLTGS-----QAQGVTSGGTGDCRS-GGITFFQPINPLLS 177 (186)
T ss_dssp -------TTCTTCEEEETT-----EEEEEEEEEEEETTT-EEEEEEEEHHHHHH
T ss_pred -------CCCccCeEEECC-----EEEEEEeecCCCCCC-CCcEEEEEHHHHHH
Confidence 699999999632 78999999875 543 45789999876544
No 122
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=99.12 E-value=2e-09 Score=103.81 Aligned_cols=168 Identities=19% Similarity=0.156 Sum_probs=95.4
Q ss_pred eeEEEEEEEeCC--EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCccc
Q psy6528 92 RFYCGGTLINDR--YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPI 169 (421)
Q Consensus 92 ~~~CgGtLIs~~--~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~ 169 (421)
...++|.+|+++ ||||+|||+.+. ..+.|.+.. ...... +++..+ ..+||||||++.+.
T Consensus 62 ~~~GSGfiI~~~~G~IlTnaHVv~~~--~~i~V~~~d---------g~~~~a-~vv~~d-----~~~DlAlLkv~~~~-- 122 (345)
T 3stj_A 62 EGLGSGVIINASKGYVLTNNHVINQA--QKISIQLND---------GREFDA-KLIGSD-----DQSDIALLQIQNPS-- 122 (345)
T ss_dssp EEEEEEEEEETTTTEEEECHHHHTTE--EEEEEECTT---------SCEEEE-EEEEEE-----TTTTEEEEEESSCC--
T ss_pred ceeEEEEEEECCCCEEEEChHHhCCC--CEEEEEeCC---------CcEEEE-EEEEEc-----CCCCEEEEEEcccC--
Confidence 357999999997 999999999753 334454321 111112 222210 14799999997653
Q ss_pred CCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCC
Q psy6528 170 VDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDS 249 (421)
Q Consensus 170 s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~ 249 (421)
.+.++.|... .....|..+.++||...... .+..-+++...+.. .. ......++++. ...
T Consensus 123 --~~~~~~l~~s-~~~~~G~~V~aiG~p~g~~~--------~vt~G~Vs~~~~~~-~~---~~~~~~~iq~d-----a~i 182 (345)
T 3stj_A 123 --KLTQIAIADS-DKLRVGDFAVAVGNPFGLGQ--------TATSGIVSALGRSG-LN---LEGLENFIQTD-----ASI 182 (345)
T ss_dssp --SCCCCCBCCG-GGCCTTBEEEEEECGGGCSC--------EEEEEEEEEEEECC-SS---SSSSCCEEEEC-----SCC
T ss_pred --CCceEeecCc-ccCCCCCEEEEEECCCCCCC--------cEEeeEEeeecccc-cC---CCCccCEEEEe-----ccc
Confidence 3567777653 34567999999999643211 12222333222220 00 11123455542 468
Q ss_pred CcCCCCCeeEEEecCCceEEEEEEEeCCCCC-CCCCCeEEEEeceehhhhhhhc
Q psy6528 250 CQGDSGGPMVFEREDSRYEQIGIVSWGAGCG-RAGYPGVYTRITRYVEWIKEKS 302 (421)
Q Consensus 250 C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~-~~~~p~vyt~V~~y~~WI~~~~ 302 (421)
|+|+|||||+..+ | .++||.++...-. ....-+....+.....++++.+
T Consensus 183 ~~GnSGGPLvn~~--G--~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~ 232 (345)
T 3stj_A 183 NRGNSGGALLNLN--G--ELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLI 232 (345)
T ss_dssp CTTCTTCEEECTT--S--CEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHH
T ss_pred CCCcCccceeCCC--C--EEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHH
Confidence 9999999998543 3 5899999864422 1111233344444555555544
No 123
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.07 E-value=2.2e-10 Score=100.82 Aligned_cols=155 Identities=19% Similarity=0.243 Sum_probs=82.4
Q ss_pred eEEE-EEEEe--CC--EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCc
Q psy6528 93 FYCG-GTLIN--DR--YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRV 167 (421)
Q Consensus 93 ~~Cg-GtLIs--~~--~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv 167 (421)
..|+ |.+++ +. +||||+||+.+... +.+ . . .+-+++--+| ..+|+||||++.+.
T Consensus 13 ~~CTsGf~v~~~~G~~~ilTa~Hc~~~g~~----v~~--------~-d----~~g~v~~~~~----p~~DiAlikl~~~~ 71 (188)
T 2oua_A 13 GRCSVGFAATNASGQPGFVTAGHCGSVGTQ----VSI--------G-N----GRGVFERSVF----PGNDAAFVRGTSNF 71 (188)
T ss_dssp SEEECCEEEECTTCCEEEEECGGGCCTTCE----EEE--------T-T----EEEEEEEEEC----SBSCEEEEEEEESC
T ss_pred CcEecCEEEEeCCCCEEEEECcccCCCCCE----EEe--------c-C----ceEEEEeeCC----CCCCEEEEEeCCCC
Confidence 4587 77775 33 99999999854321 111 0 0 1111221112 25799999998876
Q ss_pred ccCCCccc------cccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEec
Q psy6528 168 PIVDIIKP------VCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAG 241 (421)
Q Consensus 168 ~~s~~v~p------icLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~ 241 (421)
...+.+++ +.++.. .....++.+...|.-. +.....+......+...+ .. . ..+...++|+.
T Consensus 72 ~~~~~v~~~g~~~~~~l~~~-~~~~vG~~v~~~G~~t----G~t~G~v~~~~~~v~~~~-~~----~--~~~~~~~~~~~ 139 (188)
T 2oua_A 72 TLTNLVSRYNSGGYATVSGS-STAPIGSQVCRSGSTT----GWYCGTIQARNQTVSYPQ-GT----V--HSLTRTSVCAE 139 (188)
T ss_dssp EEEEEEECGGGCSEEECCBC-CCCCTTCEEEEEETTT----EEEEEEEEEEEEEEEETT-EE----E--EEEEEESCCCC
T ss_pred ccccceeecCCcceEeccCc-cCCCCCCeEEEEEcCC----CeEEEEEEEEeeEEEeCC-Cc----E--eeeEeeeeecC
Confidence 55544443 345442 3445577665554311 000111222222221000 00 0 01122345542
Q ss_pred cCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCC-CCCCCCCeEEEEeceeh
Q psy6528 242 YPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAG-CGRAGYPGVYTRITRYV 295 (421)
Q Consensus 242 ~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~V~~y~ 295 (421)
+|||||||++.. .++||+|++.. |.. ..++.|++|...+
T Consensus 140 ---------~GDSGgpl~~~~-----~~vGi~s~~~~~~~~-~~~~~~~pi~~~l 179 (188)
T 2oua_A 140 ---------PGDSGGSFISGT-----QAQGVTSGGSGNCRT-GGTTFYQEVNPML 179 (188)
T ss_dssp ---------TTCTTCEEEETT-----EEEEEEEEEEEETTT-EEEEEEEESHHHH
T ss_pred ---------CCCccceEEECC-----EEEEEEeccCCCCCC-CCceEEEEHHHHH
Confidence 699999999632 78999999875 653 3468888876644
No 124
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.86 E-value=3.2e-08 Score=98.79 Aligned_cols=170 Identities=19% Similarity=0.205 Sum_probs=90.6
Q ss_pred eeEEEEEEEeC--CEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCccc
Q psy6528 92 RFYCGGTLIND--RYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPI 169 (421)
Q Consensus 92 ~~~CgGtLIs~--~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~ 169 (421)
...++|.+|++ .||||+|||+.+. ..+.|.+.. . ..... +++.. ...+||||||++.
T Consensus 76 ~~~GSGfiI~~~~G~IlTn~HVv~~a--~~i~V~~~d--------g-~~~~a-~vv~~-----d~~~DlAlLkv~~---- 134 (451)
T 3pv2_A 76 ESIGSGVIIDPNNGVIITNDHVIRNA--SLITVTLQD--------G-RRLKA-RLIGG-----DSETDLAVLKIDA---- 134 (451)
T ss_dssp EEEEEEEEEETTTTEEEECHHHHTTE--EEEEEECTT--------S-CEEEC-EEEEE-----ETTTTEEEEECCC----
T ss_pred ceeEEEEEEECCCCEEEEChHHhCCC--CEEEEEEcC--------C-CEEEE-EEEec-----CcCCcEEEEEEcC----
Confidence 35799999997 4999999999763 344554421 1 11111 22211 1247999999964
Q ss_pred CCCccccccCCCCCCCCCCCcEEEEe--cccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCC
Q psy6528 170 VDIIKPVCLPTVLNNTYEDETGVVMG--WGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMK 247 (421)
Q Consensus 170 s~~v~picLp~~~~~~~~~~~~~v~G--wG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~ 247 (421)
..+.++.|... .....|..+.++| ||..... .+.......+.-+.+.... ......+++.. .
T Consensus 135 -~~l~~~~l~~s-~~~~~G~~V~aiG~P~G~~~~~--~~~~vt~Givs~~~r~~~~-------~~~~~~~iqtd-----a 198 (451)
T 3pv2_A 135 -KNLKSLVIGDS-DKLEVGDFVVAIGNPFGLNSFG--NSQSATFGIVSALKRSDLN-------IEGVENFIQTD-----A 198 (451)
T ss_dssp -SSCCCCCBCCG-GGCCTTCEEEEEECCCCC-------CCEEEEEEEEEEC-----------------CCEEES-----S
T ss_pred -cCCceeEecCc-ccCCCCCEEEEEECCCCccccc--cCCceeEEEEeeccccccC-------CCCcceEEEEe-----c
Confidence 34567777643 3456699999999 5542111 1122222222222221111 01113345653 4
Q ss_pred CCCcCCCCCeeEEEecCCceEEEEEEEeCCCC-CCCCCCeEEEEeceehhhhhhhc
Q psy6528 248 DSCQGDSGGPMVFEREDSRYEQIGIVSWGAGC-GRAGYPGVYTRITRYVEWIKEKS 302 (421)
Q Consensus 248 ~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c-~~~~~p~vyt~V~~y~~WI~~~~ 302 (421)
..|+|+|||||+..+ | .++||.++...- +....-+....+.....++++.+
T Consensus 199 ~i~~GnSGGPl~n~~--G--~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~ 250 (451)
T 3pv2_A 199 AINPGNSGGALVNAK--G--ELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQII 250 (451)
T ss_dssp CCCGGGTTSEEEETT--C--CEEEEEECCC------CCCEEEEEHHHHHHHHHHHH
T ss_pred ccCCCCCcCcccCCC--C--eEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHH
Confidence 678999999999643 2 589999886542 11112234455555555665544
No 125
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.85 E-value=1.2e-07 Score=94.42 Aligned_cols=144 Identities=19% Similarity=0.201 Sum_probs=85.8
Q ss_pred eeEEEEEEEeCC--EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCccc
Q psy6528 92 RFYCGGTLINDR--YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPI 169 (421)
Q Consensus 92 ~~~CgGtLIs~~--~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~ 169 (421)
...++|.+|+++ ||||+|||+.+. ..+.|.+.. .... ..+++.. ...+||||||++.+.
T Consensus 62 ~~~GSGfii~~~~G~IlTn~Hvv~~a--~~i~V~~~d---------g~~~-~a~vv~~-----d~~~DlAllkv~~~~-- 122 (436)
T 4a8c_A 62 EGLGSGVIINASKGYVLTNNHVINQA--QKISIQLND---------GREF-DAKLIGS-----DDQSDIALLQIQNPS-- 122 (436)
T ss_pred ceEEEEEEEECCCCEEEECHHHhCCC--CEEEEEeCC---------CCEE-EEEEEEE-----cCCCCEEEEEecCCC--
Confidence 457999999997 999999999764 345555431 1111 1122221 124799999997653
Q ss_pred CCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCC
Q psy6528 170 VDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDS 249 (421)
Q Consensus 170 s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~ 249 (421)
.+.++.|... .....|..+.++||...... .. ..-+++...+.. .. ..-...++... ...
T Consensus 123 --~l~~~~l~~s-~~~~~G~~v~aiG~P~g~~~-----~v---t~G~vs~~~r~~-~~---~~~~~~~iq~d-----a~i 182 (436)
T 4a8c_A 123 --KLTQIAIADS-DKLRVGDFAVAVGNPFGLGQ-----TA---TSGIVSALGRSG-LN---LEGLENFIQTD-----ASI 182 (436)
T ss_pred --CCceEeccCc-ccCCCCCEEEEEEcCCCCCc-----cE---EEEEEeeecccc-cC---CCCccCEEEEc-----Ccc
Confidence 3567778653 44567999999999642211 11 122222222210 00 00112344442 467
Q ss_pred CcCCCCCeeEEEecCCceEEEEEEEeCCC
Q psy6528 250 CQGDSGGPMVFEREDSRYEQIGIVSWGAG 278 (421)
Q Consensus 250 C~GDsGgPL~~~~~~~~~~lvGI~S~g~~ 278 (421)
|+|+|||||+..+ | .++||.+....
T Consensus 183 ~~GnSGGPl~n~~--G--~vvGI~~~~~~ 207 (436)
T 4a8c_A 183 NRGNAGGALLNLN--G--ELIGINTAILA 207 (436)
T ss_pred CCCCCcCcccCCC--C--EEEEEEeeecc
Confidence 8999999998654 2 79999988654
No 126
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=98.56 E-value=1.7e-07 Score=83.01 Aligned_cols=142 Identities=17% Similarity=0.160 Sum_probs=69.5
Q ss_pred cCeeEEE-EEEEeC---CEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECC
Q psy6528 90 FNRFYCG-GTLIND---RYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLND 165 (421)
Q Consensus 90 ~~~~~Cg-GtLIs~---~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~ 165 (421)
.+...|+ |.++++ .+||||+||+.... .+ . .+ . ..+-+++.-.| ..+|+||||++.
T Consensus 12 ~~~~~CT~Gf~v~~~~~~~ilTa~Hc~~~~~--~v--~---~~------~---~~~g~vv~~~~----~~~D~Avi~i~~ 71 (198)
T 2h5c_A 12 NNASLCSVGFSVTRGATKGFVTAGHCGTVNA--TA--R---IG------G---AVVGTFAARVF----PGNDRAWVSLTS 71 (198)
T ss_dssp TTTEEEECCEEEEETTEEEEEECGGGCCTTC--EE--E---ET------T---EEEEEEEEEEC----SBSCEEEEEECT
T ss_pred CCCCCCCcCEEEecCCeeEEEECcccCCCCC--EE--E---eC------C---cEEEEEEecCC----CCCCEEEEEeCC
Confidence 3335788 777765 59999999996532 11 1 10 1 11112221111 247999999988
Q ss_pred CcccCCCccc----cccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCC-CCCCCCeEEe
Q psy6528 166 RVPIVDIIKP----VCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSS-TRISDNMMCA 240 (421)
Q Consensus 166 pv~~s~~v~p----icLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~-~~~~~~~lCa 240 (421)
+....+.+.+ +.+ ........++.+...|.- .-+....+..++...- +.... ..+...+.|+
T Consensus 72 ~~~~~~~v~~~g~~~~v-~g~~~~~vG~~V~~~G~~---------tg~t~G~V~~~~~~~~---~~~g~~~~~i~t~~~~ 138 (198)
T 2h5c_A 72 AQTLLPRVANGSSFVTV-RGSTEAAVGAAVCRSGRT---------TGYQCGTITAKNVTAN---YAEGAVRGLTQGNACM 138 (198)
T ss_dssp TSEEEEEEEETTEEEEC-CBCCCCCTTCEEEEEETT---------TEEEEEEEEEEEEEEE---ETTEEEEEEEEECSCC
T ss_pred CCccCceEecCCceEEe-cCcccCCCCCeEEEeecC---------cceEEEEEEeeeeEEE---eCCCeEeeeEEecccC
Confidence 7544444332 111 111233445555555431 1134444444332100 00000 0001111222
Q ss_pred ccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCC
Q psy6528 241 GYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGA 277 (421)
Q Consensus 241 ~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~ 277 (421)
-+|||||||+.. ++ +++||+|++.
T Consensus 139 ---------~~GDSGGPl~~~--~g--~~vGI~s~~~ 162 (198)
T 2h5c_A 139 ---------GRGDSGGSWITS--AG--QAQGVMSGGN 162 (198)
T ss_dssp ---------BTTCTTCEEECT--TC--BEEEEEEEEC
T ss_pred ---------CCCcceeEEEee--CC--EEEEEEEeec
Confidence 279999999942 22 6899999984
No 127
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.52 E-value=1.7e-06 Score=86.19 Aligned_cols=144 Identities=19% Similarity=0.234 Sum_probs=83.6
Q ss_pred eeEEEEEEEeCC--EEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCccc
Q psy6528 92 RFYCGGTLINDR--YVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPI 169 (421)
Q Consensus 92 ~~~CgGtLIs~~--~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~ 169 (421)
...|+|.+|+++ ||||++||+.+. ..+.|.+.. . .. ...+++.. ....||||||++.+
T Consensus 85 ~~~GSG~ii~~~~g~IlTn~HVv~~a--~~i~V~~~d--------g-~~-~~a~vv~~-----d~~~DlAvlkv~~~--- 144 (448)
T 1ky9_A 85 MALGSGVIIDADKGYVVTNNHVVDNA--TVIKVQLSD--------G-RK-FDAKMVGK-----DPRSDIALIQIQNP--- 144 (448)
T ss_dssp EEEEEEEEEETTTTEEEEEHHHHTTE--EEEEEEETT--------S-CE-EEEEEEEE-----ETTTTEEEEEESSC---
T ss_pred ccEEEEEEEECCCCEEEEChHHhCCC--CEEEEEECC--------C-CE-EEEEEEEE-----cCCCCEEEEEecCC---
Confidence 357999999975 999999999753 345565531 1 11 11222221 12579999999864
Q ss_pred CCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCC
Q psy6528 170 VDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDS 249 (421)
Q Consensus 170 s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~ 249 (421)
..+.++.|... .....|..+.++||..... .......+.-+.+..-. ..-...++++. ...
T Consensus 145 -~~~~~~~l~~s-~~~~~G~~V~aiG~P~g~~-----~tvt~Givs~~~r~~~~-------~~~~~~~iqtd-----a~i 205 (448)
T 1ky9_A 145 -KNLTAIKMADS-DALRVGDYTVAIGNPFGLG-----ETVTSGIVSALGRSGLN-------AENYENFIQTD-----AAI 205 (448)
T ss_dssp -CSCCCCCBCCG-GGCCTTCEEEEEECTTSSS-----CEEEEEEEEEESSCC------------CCCCEEES-----CCC
T ss_pred -CCCceEEeccc-ccCCCCCEEEEEECCCCCC-----CeEEeEEEeeccccccC-------CCCccCEEEEc-----CCC
Confidence 23456666543 3455699999999754211 11222222222111000 00113455553 467
Q ss_pred CcCCCCCeeEEEecCCceEEEEEEEeCCC
Q psy6528 250 CQGDSGGPMVFEREDSRYEQIGIVSWGAG 278 (421)
Q Consensus 250 C~GDsGgPL~~~~~~~~~~lvGI~S~g~~ 278 (421)
++|+|||||+..+ | .++||.+....
T Consensus 206 ~~GnSGGpl~n~~--G--~vvGI~~~~~~ 230 (448)
T 1ky9_A 206 NRGNAGGALVNLN--G--ELIGINTAILA 230 (448)
T ss_dssp TTSCCCSEEECTT--S--CEEEEEECSST
T ss_pred CCCCCCCeeECCC--C--EEEEEEEEeec
Confidence 8999999999643 3 68999997643
No 128
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=98.17 E-value=2e-06 Score=75.03 Aligned_cols=168 Identities=14% Similarity=0.012 Sum_probs=87.7
Q ss_pred EEEEeecCeeEEEEEEE---eCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEE
Q psy6528 84 MVRLSYFNRFYCGGTLI---NDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIAL 160 (421)
Q Consensus 84 ~v~l~~~~~~~CgGtLI---s~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIAL 160 (421)
++.|+..+.++|.|+.+ ...++||||||+...... +........... .. . .+.|.......|+||
T Consensus 18 vv~l~~~d~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~---~~~~k~g~~ip~-~~--~------~~~~~~~d~~~D~al 85 (191)
T 1zyo_A 18 LVAIKSGPTTIGFGCRTKIDGEDCLLTAHHVWCNSMRP---TGLAKAGKQVSV-ED--W------EISMSSSDKMLDFAI 85 (191)
T ss_dssp EEEEEETTEEEEEEEEEEC--CEEEEECHHHHTSSSCC---CEEEETTEEEEC-CS--C------EEEEEECCTTTCEEE
T ss_pred EEEEEeCCeEEEEEEEEEECCCcEEEEChhhCcCCcce---eeecCCCCEEEc-cc--c------eeeEccCCCCCcEEE
Confidence 78888877999999999 567999999998653211 111110000000 00 0 011222333589999
Q ss_pred EEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEe
Q psy6528 161 LRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCA 240 (421)
Q Consensus 161 lkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa 240 (421)
+++...+.-.-.++++-+-. ...+..+++.|+....+ +..- ...|+.. ...++-.
T Consensus 86 l~vp~~~~s~lg~~~a~~~~----~~~~~~vt~yg~~~~~~-------~~s~------~g~~~~~--------~~~~~~~ 140 (191)
T 1zyo_A 86 VRVPTHVWSKLGVKSTPLVC----PSSKDVITCYGGSSSDC-------LMSG------VGSSSTS--------EFTWKLT 140 (191)
T ss_dssp EECCHHHHHHHTCCCCCBCC----CCSCEEEEEEEESSTTS-------EEEE------EEEEEEC--------SSTTEEE
T ss_pred EEcCCChhhhcCcceeEeec----CCCCccEEEEeecCCCC-------Eeec------ccceeec--------cCCcEEE
Confidence 99986543111234433422 12467788877754211 1110 0011100 0011111
Q ss_pred ccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhh
Q psy6528 241 GYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKE 300 (421)
Q Consensus 241 ~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~ 300 (421)
- ...+-.|+||+|++..+ .+|||..-+..-+ .-..-+++..+.+||.+
T Consensus 141 ~----~~~T~~G~SGsP~~ng~-----~IVGvh~G~~~~~---~~N~a~n~~~~~~~~~~ 188 (191)
T 1zyo_A 141 H----TCPTAAGWSGTPLYSSR-----GVVGMHVGFEEIG---KLNRGVNMFYVANYLLR 188 (191)
T ss_dssp E----CCCCCTTCTTCEEECSS-----CEEEEEEEEEETT---TEEEEECHHHHHHHTCC
T ss_pred E----EcCCCCCCCCCcEEcCC-----eEEEEEeCcccCC---ceeeeeehHHHhhhhhh
Confidence 0 12346799999999743 5789987653322 22345778888888644
No 129
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=98.14 E-value=4.8e-05 Score=64.78 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=49.0
Q ss_pred cCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCccc
Q psy6528 90 FNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPI 169 (421)
Q Consensus 90 ~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~ 169 (421)
.....++|.+| +.+|||++||+.+.. .+.|.+. . .. ...+++ ++ ...||||||++.+.
T Consensus 18 ~~~~~GSGfii-~g~IlTn~HVV~~~~--~i~V~~d---------g-~~-~~a~vv---~d---~~~DlAlLkv~~~~-- 75 (163)
T 2w5e_A 18 TPEGKGTGFFS-GNDIVTAAHVVGNNT--FVNVCYE---------G-LM-YEAKVR---YM---PEKDIAFITCPGDL-- 75 (163)
T ss_dssp ETTEEEEEEEE-TTEEEEEHHHHTTCS--EEEEEET---------T-EE-EEEEEE---EC---CSSSEEEEECCTTC--
T ss_pred CCceeEEEEEE-CCEEEecHHHhCCCc--eEEEEEC---------C-EE-EEEEEE---EE---CCCCEEEEEecCCC--
Confidence 34567999999 899999999997643 3445441 0 11 112222 12 25899999998642
Q ss_pred CCCccccccCCCCCCCCCCCcEEEEecc
Q psy6528 170 VDIIKPVCLPTVLNNTYEDETGVVMGWG 197 (421)
Q Consensus 170 s~~v~picLp~~~~~~~~~~~~~v~GwG 197 (421)
..+.|+.|... .......++|+.
T Consensus 76 -~~~~~l~l~~~----~~~~~v~~~G~p 98 (163)
T 2w5e_A 76 -HPTARLKLSKN----PDYSCVTVMAYV 98 (163)
T ss_dssp -CCSCCCCBCSS----CCTTEEEEEEEE
T ss_pred -CCcceEEcCCC----CCCCEEEEEEeC
Confidence 22345555432 123566777775
No 130
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=97.88 E-value=5.6e-05 Score=80.50 Aligned_cols=173 Identities=18% Similarity=0.248 Sum_probs=89.9
Q ss_pred EEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCcccCCCcc
Q psy6528 95 CGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPIVDIIK 174 (421)
Q Consensus 95 CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~s~~v~ 174 (421)
--+|||+|+||+|+||=. +. -.|.+|. ......+ +.+++|. ..|+++.||++.|. -+.
T Consensus 58 G~aTLI~pqYiVSvaHn~-gy----~~v~fG~--------~~n~Y~i--V~rnn~~----~~Dy~~pRL~K~VT---Eva 115 (1048)
T 1wxr_A 58 GVATLINPQYIASVKHNG-GY----TNVSFGD--------GENRYNI--VDRNNAP----SLDFHAPRLDKLVT---EVA 115 (1048)
T ss_dssp CCCEEEETTEEEBCTTCC-SC----CEECCTT--------SCCCEEE--EECCBCS----SSSCBCCEESSCCC---SSC
T ss_pred ceEEEEcCcEEEEeeecC-CC----ceEEeCC--------CcceEEE--EeeCCCC----CCCeeeeecccccc---ccc
Confidence 357899999999999932 22 1344443 0111111 3446554 24999999999885 367
Q ss_pred ccccCCCC------CCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCC-------CCCCCCCeEE-e
Q psy6528 175 PVCLPTVL------NNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYS-------STRISDNMMC-A 240 (421)
Q Consensus 175 picLp~~~------~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~-------~~~~~~~~lC-a 240 (421)
||.+.... .........+-+|=|...-..... .+.. +.. .+.+. .....+..++ .
T Consensus 116 P~~~t~~g~~~~~y~d~ery~~f~RvGsG~q~~~~~ng-~~~~-----l~~-----aY~yltGGt~~~~~~~~~~~li~~ 184 (1048)
T 1wxr_A 116 PTAVTAQGAVAGAYLDKERYPVFYRLGSGTQYIKDSNG-QLTK-----MGG-----AYSWLTGGTVGSLSSYQNGEMIST 184 (1048)
T ss_dssp CCCBCSSCSCTTGGGCTTTCCCEEEEECSCEEEECTTC-CEEE-----EEC-----TTSSCEEEEECCCEEETTTTEEEE
T ss_pred ceeeccccCccccccccccCceEEEECCcEEEEEcCCC-ceeE-----ccc-----cceEEecccccCccccCCceEEec
Confidence 87776532 112335667778887652100000 0110 000 00000 0000111122 0
Q ss_pred c---------cCCCCCCCCcCCCCCeeEEEe-cCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 241 G---------YPEGMKDSCQGDSGGPMVFER-EDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 241 ~---------~~~~~~~~C~GDsGgPL~~~~-~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
. ...-....-.||||+||+..+ ..++|+|+|+.|.|..-+..+ ..|.-+. .+|+++++++
T Consensus 185 ~~g~~f~~~~~~PL~~~~~~GDSGSPlF~yD~~~kKWvLvGv~s~g~~~g~~~--~~~~~~~--~~f~~~~~~~ 254 (1048)
T 1wxr_A 185 SSGLVFDYKLNGAMPIYGEAGDSGSPLFAFDTVQNKWVLVGVLTAGNGAGGRG--NNWAVIP--LDFIGQKFNE 254 (1048)
T ss_dssp CTTCTTCHHHHCSSBCBCCTTCTTCEEEEEETTTTEEEEEEEEEEESSTTCSC--EEEEECC--HHHHHHHHHT
T ss_pred cCCcccccccCCcccCCCCCCCCCCeeeEEEcCCCeEEEEEEecccccCCccc--ceEEEeC--HHHhhhhhhc
Confidence 0 000112345799999998876 478999999998554312111 3444443 3788776654
No 131
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.84 E-value=0.00028 Score=71.32 Aligned_cols=184 Identities=20% Similarity=0.223 Sum_probs=90.2
Q ss_pred CCCceEEEEeecCeeEEEEEEEeCCEEEEccccccCcceeeEEEEEeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCce
Q psy6528 79 NQYPWMVRLSYFNRFYCGGTLINDRYVLTAAHCVKGRLWFLIKATFGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDI 158 (421)
Q Consensus 79 ~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DI 158 (421)
...||+-.- .....-+|.+|++.+|||.+|++.+. ..+.|.+- .+.. ....+++.. ....||
T Consensus 62 ~~~Pw~~~~--~~~s~GSGfiI~dG~IlTN~HVV~~a--~~i~V~~~-------~dg~--~~~A~vv~~-----D~~~DL 123 (539)
T 4fln_A 62 YSLPWQKQR--QFTSTGSAFMIGDGKLLTNAHCVEHD--TQVKVKRR-------GDDR--KYVAKVLVR-----GVDCDI 123 (539)
T ss_dssp SSSTTSBCC--CEEEEEEEEEEETTEEEECGGGGTTE--EEEEEECT-------TCCC--CEEEEEEEE-----ETTTTE
T ss_pred CCCccccCC--ccceEEEEEEEECCEEEEChHHcCCC--CeEEEEEc-------cCCE--EEEEEEEEE-----CCCCCE
Confidence 345775432 12345789999999999999999753 33444321 0111 111222221 124799
Q ss_pred EEEEECCCcccCCCccccccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeE
Q psy6528 159 ALLRLNDRVPIVDIIKPVCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMM 238 (421)
Q Consensus 159 ALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~l 238 (421)
||||++.+-. ...+.|+.+.. ....+..+.++|+...... .. +..-+++.-.-. .... . .....
T Consensus 124 AvLkv~~~~~-~~~~~pl~~g~---~~~vGd~V~aiG~P~g~~~----~t---vT~GIVSa~~r~-~~~~--~--~~~~~ 187 (539)
T 4fln_A 124 ALLSVESEDF-WKGAEPLRLGH---LPRLQDSVTVVGYPLGGDT----IS---VTKGVVSRIEVT-SYAH--G--SSDLL 187 (539)
T ss_dssp EEEEECCSSS-STTCCCCCBCC---CCCTTCEEEEEECCSSSCC----CE---EEEEEEEEEEEE-ECTT--S--CCEEE
T ss_pred EEEEEeCCcC-CcCCceeecCC---cCcCCCeEEEEEcCCCCCC----Cc---EEeEEECccccc-ccCC--C--Cccee
Confidence 9999976422 23344555532 2345888899987532111 01 122233221111 0000 0 01111
Q ss_pred EeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcc
Q psy6528 239 CAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSK 303 (421)
Q Consensus 239 Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 303 (421)
... -....-+|.|||||+-.. | .++||.+....-.....-+...-+......+.+.++
T Consensus 188 ~IQ---tDAaInpGnSGGPLvn~~--G--eVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~ 245 (539)
T 4fln_A 188 GIQ---IDAAINPGNSGGPAFNDQ--G--ECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYER 245 (539)
T ss_dssp EEE---ESSCCCTTTTTSEEECSS--S--CEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHT
T ss_pred EEE---EEeEecCCCccchhccCC--C--cEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHH
Confidence 111 113456799999998543 3 689998765432211122333444444455555443
No 132
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=96.38 E-value=0.034 Score=47.35 Aligned_cols=31 Identities=23% Similarity=-0.052 Sum_probs=22.9
Q ss_pred EEEeecCeeEEEEEEEeCC-EEEEccccccCc
Q psy6528 85 VRLSYFNRFYCGGTLINDR-YVLTAAHCVKGR 115 (421)
Q Consensus 85 v~l~~~~~~~CgGtLIs~~-~VLTAAhC~~~~ 115 (421)
|++.-.....++|-.|+.+ +||||+|=+.+.
T Consensus 7 ~~v~g~~~G~GsgF~i~~~g~vVTA~HVv~~~ 38 (198)
T 1mbm_A 7 GFVAGSSYGTGSVWTRNNEVVVLTASHVVGRA 38 (198)
T ss_dssp EEEESSSEEEEEEEEETTEEEEEEEHHHHCTT
T ss_pred EEEecccCCccceEEECCCeEEEEeeeEEccC
Confidence 4444344567999999966 699999999553
No 133
>3syj_A Adhesion and penetration protein autotransporter; bacterial aggregation and biofilm formation, SELF-associatin autotransporter (SAAT); 2.20A {Haemophilus influenzae}
Probab=95.17 E-value=0.1 Score=54.94 Aligned_cols=53 Identities=21% Similarity=0.320 Sum_probs=33.3
Q ss_pred CCcCCCCCeeEEEe-cCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhcccc
Q psy6528 249 SCQGDSGGPMVFER-EDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKEG 305 (421)
Q Consensus 249 ~C~GDsGgPL~~~~-~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~~ 305 (421)
.-.||||+||+..+ ..++|+|+|+.+.+.+..... ..|+-+ ..+|+.+++.+.
T Consensus 213 g~~GDSGSPLFayD~~~~KWvl~Gv~~~~~~~~g~~--n~~~i~--~~~f~~~~~~~D 266 (1011)
T 3syj_A 213 GSKGDSGSPMFIYDAEKQKWLINGILREGNPFEGKE--NGFQLV--RKSYFDEIFERD 266 (1011)
T ss_dssp CCTTCTTCEEEEEETTTTEEEEEEEECC----------EEEEEC--CHHHHHHHHHHH
T ss_pred CCCCCCCCcceeeEcCCCeEEEEEEeeccccccCcc--cceEEe--chHHhhhhhhcc
Confidence 46799999998876 477999999998765443211 234422 357888887643
No 134
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=94.44 E-value=0.12 Score=44.73 Aligned_cols=36 Identities=22% Similarity=0.013 Sum_probs=24.0
Q ss_pred ceEEEEeecCeeEEEEEEEeC-CEEEEccccccCcce
Q psy6528 82 PWMVRLSYFNRFYCGGTLIND-RYVLTAAHCVKGRLW 117 (421)
Q Consensus 82 Pw~v~l~~~~~~~CgGtLIs~-~~VLTAAhC~~~~~~ 117 (421)
|=.|.+.-.....++|--|+. ..||||+|=+.+.+.
T Consensus 19 ~N~v~V~G~~~GsGt~F~i~g~~~VvTA~HVVg~~~~ 55 (213)
T 3fan_A 19 LNTVNVVGSSMGSGGVFTIDGKIKCVTAAHVLTGNSA 55 (213)
T ss_dssp TTEEEEESSSEEEEEEEEETTEEEEEEEGGGSBTTEE
T ss_pred CCeEEEeecCCCceEEEEECCcEEEEEeccEeCCCCE
Confidence 344555444455677777774 499999999876543
No 135
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=90.49 E-value=2.2 Score=37.87 Aligned_cols=149 Identities=11% Similarity=0.189 Sum_probs=76.2
Q ss_pred EEEeCCEEEEccccccCcceeeEEEE--EeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCcccCCCccc
Q psy6528 98 TLINDRYVLTAAHCVKGRLWFLIKAT--FGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPIVDIIKP 175 (421)
Q Consensus 98 tLIs~~~VLTAAhC~~~~~~~~~~v~--~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~s~~v~p 175 (421)
-|.-..||||-+|-+...+. .+++. -|.+....... ..+ +| -...||.||||.+.++ +.-+-
T Consensus 34 gigyG~~iItn~HLf~rnng-~L~I~s~hG~f~v~nt~~----lki----~~-----i~g~DiiiIrmPkDfp--Pf~~k 97 (241)
T 3mmg_A 34 GIGFGPYIIANQHLFRRNNG-ELTIKTMHGEFAVANSTQ----LQM----KP-----VEGRDIIVIKMAKDFP--PFPQK 97 (241)
T ss_dssp EEEETTEEEECGGGGSSTTC-EEEEEETTEEEEEEEGGG----SCE----EE-----CTBSSCEEEECCTTSC--CCCSC
T ss_pred EEeECCEEEEChhhcccCCC-eEEEEECCceEEccCCCc----eee----EE-----eCCccEEEEeCCCCCC--Ccchh
Confidence 35567899999999865432 23333 24443321110 011 11 1257999999977654 33233
Q ss_pred cccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCC
Q psy6528 176 VCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSG 255 (421)
Q Consensus 176 icLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsG 255 (421)
+++ ..+..+..+.++|--..... .+....+.. .+.+...+ .|= ....++=.||-|
T Consensus 98 l~F----R~P~~~E~V~lVg~~fq~k~--~~s~vSesS-~i~p~~~~--------------~fW----kHwIsT~~G~CG 152 (241)
T 3mmg_A 98 LKF----RQPTIKDRVCMVSTNFQQKS--VSSLVSESS-HIVHKEDT--------------SFW----QHWITTKDGQAG 152 (241)
T ss_dssp CCB----CCCCTTCCEEEEEEEECSSC--EEEEEEEEE-CCEECTTS--------------SEE----EECBCCCTTCTT
T ss_pred ccc----CCCCCCCeEEEEEeecccCC--ccEEECCcc-eeEEcCCC--------------CEE----EEEcCCCCCcCC
Confidence 333 33445666677775433211 111111110 01111111 111 112344568999
Q ss_pred CeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEece
Q psy6528 256 GPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITR 293 (421)
Q Consensus 256 gPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~ 293 (421)
+||+... ++ .+|||-|.+..-.. -..|+.+..
T Consensus 153 lPlVs~~-Dg--~IVGiHsl~~~~~~---~N~F~~f~~ 184 (241)
T 3mmg_A 153 SPLVSII-DG--NILGIHSLTHTTNG---SNYFVEFPE 184 (241)
T ss_dssp CEEEETT-TC--CEEEEEEEEETTTC---CEEEEECCT
T ss_pred CeEEEcC-CC--cEEEEEecccCCCC---cEEEEcCCH
Confidence 9999876 33 68999998764332 367887754
No 136
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=87.44 E-value=6 Score=34.78 Aligned_cols=157 Identities=14% Similarity=0.225 Sum_probs=82.2
Q ss_pred EEEeCCEEEEccccccCcceeeEEEE--EeeeeccCCCCCCceeEEEEEEcCCCCCCCCCCceEEEEECCCcccCCCccc
Q psy6528 98 TLINDRYVLTAAHCVKGRLWFLIKAT--FGEYDRCDTSSKPESRFVIRAIVGDFTFSNFDNDIALLRLNDRVPIVDIIKP 175 (421)
Q Consensus 98 tLIs~~~VLTAAhC~~~~~~~~~~v~--~G~~~~~~~~~~~~~~~v~~~i~p~y~~~~~~~DIALlkL~~pv~~s~~v~p 175 (421)
-|.--.|+||-+|-+...+ ..+++. -|.+...... ...+..+ ...||.||||.+.++ +.-+-
T Consensus 42 gigyG~~iItn~HLf~~nn-G~L~I~s~hG~f~v~nt~----~lki~~i---------~g~DiiiIrmPkDfp--Pf~~~ 105 (229)
T 1lvm_A 42 GIGFGPFIITNKHLFRRNN-GTLLVQSLHGVFKVKNTT----TLQQHLI---------DGRDMIIIRMPKDFP--PFPQK 105 (229)
T ss_dssp EEEETTEEEECGGGGGCCS-SEEEEEETTEEEEESCGG----GSEEEEC---------TTSSCEEEECCTTSC--CCCSC
T ss_pred EEeECCEEEeChhhhccCC-CcEEEEeCCCeEEeCCCC----ceeeEEe---------CCccEEEEeCCCcCC--Ccccc
Confidence 3456789999999997642 234444 3555542221 1112211 257999999988765 33233
Q ss_pred cccCCCCCCCCCCCcEEEEecccCCCCCCCccceeEEEeeeechhhhccccCCCCCCCCCCeEEeccCCCCCCCCcCCCC
Q psy6528 176 VCLPTVLNNTYEDETGVVMGWGTLEESGRPACIIRDVEVPILSNQYCRTSTNYSSTRISDNMMCAGYPEGMKDSCQGDSG 255 (421)
Q Consensus 176 icLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~lCa~~~~~~~~~C~GDsG 255 (421)
+++ ..+..+..+.++|--...... +....+... +.+.. .+.|= .-.-++=.||=|
T Consensus 106 l~F----R~P~~~e~V~lVg~~fq~k~~--~s~vSesS~-i~p~~--------------~~~fW----kHwIsT~~G~CG 160 (229)
T 1lvm_A 106 LKF----REPQREERICLVTTNFQTKSM--SSMVSDTSC-TFPSS--------------DGIFW----KHWIQTKDGQCG 160 (229)
T ss_dssp CCB----CCCCTTCEEEEEEEECSSSSC--EEEECCCEE-CEEET--------------TTTEE----EECBCCCTTCTT
T ss_pred ccc----CCCCCCCeEEEEEeEeecCCc--cEEECCcce-eEecC--------------CCCEe----EEEeeCCCCcCC
Confidence 333 334456666667654432211 101100000 00000 00000 011344457889
Q ss_pred CeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEece-ehhhhhhh
Q psy6528 256 GPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITR-YVEWIKEK 301 (421)
Q Consensus 256 gPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~-y~~WI~~~ 301 (421)
.||+... ++ .+|||-|.+..-.. -..|+.+.. +.+.|+..
T Consensus 161 lPlVs~~-Dg--~IVGiHsl~~~~~~---~NyF~~f~~~f~~~L~~~ 201 (229)
T 1lvm_A 161 SPLVSTR-DG--FIVGIHSASNFTNT---NNYFTSVPKNFMELLTNQ 201 (229)
T ss_dssp CEEEETT-TC--CEEEEEEEEETTSC---SEEEEECCTTHHHHHHCG
T ss_pred CcEEECC-CC--cEEEEEcccccCCC---eEEEeCCCHHHHHHHhcc
Confidence 9999876 33 68999998765332 367888865 44555543
No 137
>3h09_A IGA1 protease, immunoglobulin A1 protease; serine protease, beta helix, hydrolase, M protease, secreted, transmembrane, virulence; 1.75A {Haemophilus influenzae}
Probab=80.81 E-value=1.2 Score=47.10 Aligned_cols=53 Identities=21% Similarity=0.365 Sum_probs=34.5
Q ss_pred CCcCCCCCeeEEEe-cCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhhhhccc
Q psy6528 249 SCQGDSGGPMVFER-EDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIKEKSKE 304 (421)
Q Consensus 249 ~C~GDsGgPL~~~~-~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~ 304 (421)
.-.||||+||+..+ ..++|+|+|+.++..+-....+ ..|+-+ -.+++++++++
T Consensus 258 ~~~GDSGSPlF~yD~~~~kWvl~Gvl~~~~g~~~~~~-~~w~i~--~~~f~~~i~~~ 311 (989)
T 3h09_A 258 AVLGDSGSPLFVYDREKGKWLFLGSYDFWAGYNKKSW-QEWNIY--KPEFAKTVLDK 311 (989)
T ss_dssp CCTTCTTCEEEEEETTTTEEEEEEEEEEECHHHHCCE-EEEEEC--CHHHHHHHHHH
T ss_pred CCcCCCCCccceeecccceEEEEEEeecccccCCccc-ceeEec--cHHHHHhHhhc
Confidence 45799999998875 4789999999987432211111 123333 35678877765
No 138
>3sze_A Serine protease ESPP; parallel beta-helix, hydrolase; 2.50A {Escherichia coli O157}
Probab=78.81 E-value=1.4 Score=46.58 Aligned_cols=27 Identities=22% Similarity=0.379 Sum_probs=22.5
Q ss_pred CCcCCCCCeeEEEe-cCCceEEEEEEEe
Q psy6528 249 SCQGDSGGPMVFER-EDSRYEQIGIVSW 275 (421)
Q Consensus 249 ~C~GDsGgPL~~~~-~~~~~~lvGI~S~ 275 (421)
.-.||||+||+..+ ..++|+|+||++-
T Consensus 203 ~~~GDSGSPlFaYD~~~~KWvl~GVl~~ 230 (968)
T 3sze_A 203 ASQGDAGSALFVYDNQKKKWVVAGTVWG 230 (968)
T ss_dssp CCTTCTTCEEEEEETTTTEEEEEEEEEE
T ss_pred CCcCCCCCcceeEEcCCCeEEEEEEEec
Confidence 46799999998776 4789999999764
No 139
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=63.87 E-value=8.9 Score=31.09 Aligned_cols=30 Identities=23% Similarity=0.498 Sum_probs=25.4
Q ss_pred CCCCcCCCCCeeEEEecCCceEEEEEEEeCC
Q psy6528 247 KDSCQGDSGGPMVFEREDSRYEQIGIVSWGA 277 (421)
Q Consensus 247 ~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~ 277 (421)
-++-+||-|.|.+... ++.|+++||-.-+.
T Consensus 134 LGT~PGDCGcPYvykr-gn~~vv~GVHtAat 163 (185)
T 4ash_A 134 LGTIPGDAGCPYVYKK-GNTWVVIGVHVAAT 163 (185)
T ss_dssp CSCCTTCTTCEEEEEE-TTEEEEEEEEEEEC
T ss_pred CCCCCCCCCCceEEee-CCceEEEEEEEeec
Confidence 3567899999999988 88999999987653
No 140
>3h8d_A Myosin-VI; myosin VI, myosin 6, DAB2, cargo binding, protein-peptide complex, actin-binding, ATP-binding, calmodulin-binding; 2.20A {Mus musculus} PDB: 2kia_A
Probab=52.89 E-value=4.1 Score=32.01 Aligned_cols=23 Identities=30% Similarity=0.952 Sum_probs=18.9
Q ss_pred cCCCCCCCCcccCceeeeEE--Eee
Q psy6528 368 SDTDADPHNASRGFFFSHIG--WLM 390 (421)
Q Consensus 368 ~~~~~dp~~~~~g~~~~~~~--w~~ 390 (421)
+|..++|.+..+|+||+|+- |+-
T Consensus 25 ~~~~k~~~~~k~G~WYAHFdGqwIa 49 (141)
T 3h8d_A 25 ADQYKDPQNKKKGWWYAHFDGPWIA 49 (141)
T ss_dssp GGTTSCGGGCCEEEEEEEEETTEEE
T ss_pred cccccCCCCcccceEEEeeCChhhh
Confidence 56777888899999999995 654
No 141
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=43.16 E-value=28 Score=28.29 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=23.7
Q ss_pred CCCCcCCCCCeeEEEecCCceEEEEEEEeCC
Q psy6528 247 KDSCQGDSGGPMVFEREDSRYEQIGIVSWGA 277 (421)
Q Consensus 247 ~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~ 277 (421)
-++-+||-|.|.+... ++.|+++||-.-+.
T Consensus 145 LGT~PGDCGcPYvykr-gndwvv~GVH~Aat 174 (194)
T 2fyq_A 145 LGTIPGDCGAPYVHKR-GNDWVVCGVHAAAT 174 (194)
T ss_dssp ---CGGGTTCEEEEEE-TTEEEEEEEEEEEC
T ss_pred CCCCCCCCCCceEEee-CCceEEEEEEEeec
Confidence 3567899999999988 88999999987653
No 142
>3kl4_B DPAP B, YSCV, signal peptide of yeast dipeptidyl aminopeptidase; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Saccharomyces cerevisiae}
Probab=35.59 E-value=16 Score=21.55 Aligned_cols=15 Identities=27% Similarity=0.273 Sum_probs=11.4
Q ss_pred HHHHHHHhhhcCccc
Q psy6528 340 TVLLVTSTIAGQNCL 354 (421)
Q Consensus 340 ~~l~~~~~~~~~~~~ 354 (421)
.+|+++|+.++..++
T Consensus 20 lvlliwgtvlllksi 34 (42)
T 3kl4_B 20 LVLLIWGTVLLLKSI 34 (42)
T ss_pred hhHHHHHHHHHhhcC
Confidence 367788988887765
No 143
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=31.21 E-value=51 Score=26.40 Aligned_cols=37 Identities=24% Similarity=0.487 Sum_probs=26.4
Q ss_pred CCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceeh
Q psy6528 249 SCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYV 295 (421)
Q Consensus 249 ~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~ 295 (421)
.-+||-||.|.|.. -++||++.|-. + -..|+++..+.
T Consensus 101 ~epGDCGG~L~C~H-----GviGivTaGG~----g-~VaF~D~R~l~ 137 (142)
T 2hrv_A 101 CEPGDCGGKLLCKH-----GVIGIVTAGGD----N-HVAFIDLRHFH 137 (142)
T ss_dssp CCTTCTTCEEEETT-----EEEEEEEEECS----S-EEEEEEGGGGS
T ss_pred CCCCCCCceeeeCC-----CceEEEecCCC----C-EEEEEEchhhh
Confidence 34689999999987 58899987632 1 23488877654
No 144
>1fiw_L Beta-acrosin light chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2
Probab=28.81 E-value=29 Score=18.92 Aligned_cols=19 Identities=26% Similarity=0.522 Sum_probs=12.0
Q ss_pred CCccCCCCCCC-----CCCccccC
Q psy6528 55 PMCDCSCGETN-----DATRIVGG 73 (421)
Q Consensus 55 ~~~~~~cg~~~-----~~~rI~gG 73 (421)
..|+..||.+. ...||+||
T Consensus 3 ~tcdgpCGlrfrqn~q~~~rivGG 26 (26)
T 1fiw_L 3 TTCDGPCGVRFRQNRQGGVRXXXX 26 (26)
T ss_pred cccccccCceeccCccccccccCC
Confidence 45777888653 23577776
No 145
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=25.74 E-value=22 Score=29.72 Aligned_cols=22 Identities=27% Similarity=0.649 Sum_probs=16.8
Q ss_pred CCcCCCCCeeEEEecCCceEEEEEEE
Q psy6528 249 SCQGDSGGPMVFEREDSRYEQIGIVS 274 (421)
Q Consensus 249 ~C~GDsGgPL~~~~~~~~~~lvGI~S 274 (421)
.-.|.||||++|..+ ..+||.-
T Consensus 155 ~lkGSSGgPvLC~~G----HaVGmf~ 176 (203)
T 3su6_A 155 YLKGSAGGPLLCPAG----HAVGIFR 176 (203)
T ss_dssp GTTTCTTCEEECTTS----CEEEEEE
T ss_pred eccCCCCCceecCCC----CEEEEEE
Confidence 346889999999763 5788863
No 146
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=25.38 E-value=50 Score=27.14 Aligned_cols=56 Identities=27% Similarity=0.504 Sum_probs=34.9
Q ss_pred CCCCCCCCCeEEeccCCCCCCCCcCCCCCeeEEEecCCceEEEEEEEeCCCCCCCCCCeEEEEeceehhhhh
Q psy6528 228 YSSTRISDNMMCAGYPEGMKDSCQGDSGGPMVFEREDSRYEQIGIVSWGAGCGRAGYPGVYTRITRYVEWIK 299 (421)
Q Consensus 228 ~~~~~~~~~~lCa~~~~~~~~~C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~V~~y~~WI~ 299 (421)
|++..++..++=+. ...-+||-||.|.|.. -++||++.|-. + -..|++|..+. |.+
T Consensus 105 YYP~ryQ~~vl~~~-----G~~epGDCGG~L~C~H-----GviGivTaGG~----g-~VaF~DiR~l~-~~e 160 (166)
T 1z8r_A 105 YYPKRYQSHVLLAT-----GFSEPGDAGGILRCEH-----GVIGLVTMGGE----G-VVGFADVRDLL-WLE 160 (166)
T ss_dssp TBCSEEEESEEEEE-----CSSSCCCCBSEEECSS-----SEEEEEEEECS----S-EEEEEESTTCC-TTS
T ss_pred CCchhhhccEEEEe-----cCCCCCCCCceeeeCC-----CceEEEecCCC----C-EEEEEEcchhh-ccc
Confidence 44444455554322 1234689999999987 38899987632 2 24588887755 554
No 147
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=22.31 E-value=29 Score=29.94 Aligned_cols=27 Identities=37% Similarity=0.501 Sum_probs=19.2
Q ss_pred CcCCCCCeeEEEecCCceEEEEEEEeCCCCC
Q psy6528 250 CQGDSGGPMVFEREDSRYEQIGIVSWGAGCG 280 (421)
Q Consensus 250 C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c~ 280 (421)
-.||||-|++-+. | .+|+|+--|.+-+
T Consensus 201 ~~GDSGRpI~DN~--G--rVVaIVLGGanEG 227 (253)
T 2yew_A 201 KPGDSGRPIFDNT--G--KVVAIVLGGANEG 227 (253)
T ss_dssp CSSCTTCEEECSS--C--BEEEEEEEEEECS
T ss_pred CCCCCCCccccCC--C--cEEEEEecCCCcC
Confidence 4689999988654 3 5778887765443
No 148
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=22.18 E-value=26 Score=27.58 Aligned_cols=26 Identities=35% Similarity=0.468 Sum_probs=18.2
Q ss_pred CcCCCCCeeEEEecCCceEEEEEEEeCCCC
Q psy6528 250 CQGDSGGPMVFEREDSRYEQIGIVSWGAGC 279 (421)
Q Consensus 250 C~GDsGgPL~~~~~~~~~~lvGI~S~g~~c 279 (421)
-.||||-|++-+. + .+++|+--|..-
T Consensus 105 ~~GdSGrPi~Dn~--G--rVVaIVlGG~ne 130 (158)
T 4agk_A 105 GPGDSGRPILDNS--G--KVVAIVLGGANE 130 (158)
T ss_dssp CTTCTTCEEECTT--S--CEEEEEEEEEEC
T ss_pred CCCCCCCccccCC--C--CEEEEEecCCCc
Confidence 4689999987543 3 577888766543
Done!