Diaphorina citri psyllid: psy652


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
MLLGSESRQERDKQSTVNTLQWTLSKYSVSDPASLPGKILSPYLFNASYAPEFSADGVKILYNDQTPIRTTVKFGHSKGLVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDNLGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFAKTRELGDDLYKRISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVVEFRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNEALWSLYHSIISAVEPCPRE
ccccccccCEECccccccccccccccccccccccccHHccccccccccccccccccEEEEEEccccccccccccccCEEEEEEccccEEEEEEccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHccCEEEEcccccccccHHHHHHHHHccccccccccccEEEEEECcccccEEEEEccccccHHHHHHHHHHcccccEEEEccccccccccccccccEEEEEEEEEEEccccccccccccccEEEEccccccccccccccccccccccccEEEEccccccccccccccCEEEECcHHHHHHHHHHHHcccccccc
*****************NT**WTL**YS*SDPASLPGKILSPYLFNASYAPEFSADGVKILYNDQTPIRTTVKFGHSKGLVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDNLGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFAKTRELGDDLYKRISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVVEFRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNEALWSLYHSIISAVEPCP**
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MLLGSESRQERDKQSTVNTLQWTLSKYSVSDPASLPGKILSPYLFNASYAPEFSADGVKILYNDQTPIRTTVKFGHSKGLVVGNSRGGIWIVHSVPHFVDDSQTSYTYPHTGLMYGQNFLCLSLNASQLDSVGDNLGHNQIYKYSTFLSAGNKGVFPTLARVIAGEYATSGDNFFQSTIFTRFNQIPFHTFAKTRELGDDLYKRISDNLNVNLLVETWPNGPGRLRTDCESPAHEVMNVEGVALSGVVEFRSTHDHAKWTISFGNETRSNLNQDSISKHKTDGARHFVCNGDINRAEDQLKRGGGSVCIDNEALWSLYHSIISAVEPCPRE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Deoxyribonuclease-2-alpha Hydrolyzes DNA under acidic conditions with a preference for double-stranded DNA. Plays a major role in the degradation of nuclear DNA in cellular apoptosis during development. Necessary for proper fetal development and for definitive erythropoiesis in fetal liver, where it degrades nuclear DNA expelled from erythroid precursor cells.confidentQ9QZK8
Deoxyribonuclease-2-alpha Hydrolyzes DNA under acidic conditions with a preference for double-stranded DNA. Plays a major role in the degradation of nuclear DNA in cellular apoptosis during development. Necessary for proper fetal development and for definitive erythropoiesis in fetal liver, where it degrades nuclear DNA expelled from erythroid precursor cells.confidentO00115
Cell-death-related nuclease 7 confidentP34387

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0004531 [MF]deoxyribonuclease II activityprobableGO:0016787, GO:0003824, GO:0004536, GO:0004519, GO:0004520, GO:0016788, GO:0004518, GO:0003674, GO:0016894, GO:0016889
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0006259 [BP]DNA metabolic processprobableGO:0006139, GO:0044260, GO:0044238, GO:0009987, GO:0006725, GO:0044237, GO:0043170, GO:0090304, GO:0071704, GO:0034641, GO:0006807, GO:0008150, GO:0008152, GO:1901360, GO:0046483

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1QZV, chain F
Confidence level:probable
Coverage over the Query: 27-48
View the alignment between query and template
View the model in PyMOL