BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy653
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus
GN=ATP6V0A1 PE=2 SV=1
Length = 838
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/39 (87%), Positives = 34/39 (87%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus
GN=Atp6v0a1 PE=1 SV=3
Length = 839
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/39 (87%), Positives = 34/39 (87%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus
GN=ATP6V0A1 PE=1 SV=1
Length = 838
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/39 (87%), Positives = 34/39 (87%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens
GN=ATP6V0A1 PE=1 SV=3
Length = 837
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/39 (87%), Positives = 34/39 (87%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii
GN=ATP6V0A1 PE=2 SV=1
Length = 837
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/39 (87%), Positives = 34/39 (87%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
tropicalis GN=atp6v0a1 PE=2 SV=1
Length = 837
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/39 (87%), Positives = 34/39 (87%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
laevis GN=atp6v0a1 PE=2 SV=1
Length = 831
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/39 (87%), Positives = 34/39 (87%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus
norvegicus GN=Atp6v0a1 PE=2 SV=1
Length = 838
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/39 (84%), Positives = 33/39 (84%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
MG LFRSEEM L QLFLQSEAAY CVSEL ELG VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELEELGKVQFRD 39
>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens
GN=ATP6V0A4 PE=1 SV=2
Length = 840
Score = 68.9 bits (167), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSS 60
M S+FRSEEM L QLFLQ EAAY CV+ELGELGLVQF+D ++ + +N R S
Sbjct: 1 MVSVFRSEEMCLSQLFLQVEAAYCCVAELGELGLVQFKDLNMNVNSFQRKFVNEVRRCES 60
>sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus
GN=Atp6v0a4 PE=2 SV=1
Length = 833
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 40/60 (66%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSS 60
M S+FRSEEM L Q+FLQ EAAY CV+ELGELGLVQF+D + + +N R S
Sbjct: 1 MASVFRSEEMCLSQVFLQVEAAYCCVAELGELGLVQFKDLNANVNSFQRKFVNEVRRCES 60
>sp|Q13488|VPP3_HUMAN V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens
GN=TCIRG1 PE=1 SV=3
Length = 830
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRD 41
MGS+FRSEE+AL QLFL + AAY CVS LGELGLV+FRD +
Sbjct: 1 MGSMFRSEEVALVQLFLPTAAAYTCVSRLGELGLVEFRDLN 41
>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis
elegans GN=unc-32 PE=2 SV=3
Length = 905
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 4 LFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSER 56
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRD + + +N R
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVR 68
>sp|Q9Y487|VPP2_HUMAN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens
GN=ATP6V0A2 PE=1 SV=2
Length = 856
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 32/41 (78%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRD 41
MGSLFRSE M L QLFLQS AY C+S LGE GLVQFRD +
Sbjct: 1 MGSLFRSETMCLAQLFLQSGTAYECLSALGEKGLVQFRDLN 41
>sp|P15920|VPP2_MOUSE V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus
GN=Atp6v0a2 PE=1 SV=2
Length = 856
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 32/41 (78%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRD 41
MGSLFRSE M L QLFLQS AY C+S LGE GLVQFRD +
Sbjct: 1 MGSLFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRDLN 41
>sp|O97681|VPP2_BOVIN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus
GN=ATP6V0A2 PE=2 SV=1
Length = 854
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 32/41 (78%)
Query: 1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRD 41
MGSLFRSE M L QLFLQS AY C+S LGE GLV+FRD +
Sbjct: 1 MGSLFRSETMCLAQLFLQSGTAYECLSVLGEKGLVEFRDLN 41
>sp|Q54E04|VATM_DICDI Vacuolar proton translocating ATPase 100 kDa subunit
OS=Dictyostelium discoideum GN=vatM PE=1 SV=2
Length = 815
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 3 SLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
S++RS M + QLF+Q EAA+ V ELG+LGL+QF D
Sbjct: 7 SIWRSSPMQMVQLFVQIEAAHDTVDELGKLGLIQFLD 43
>sp|O13742|VPH1_SCHPO V-type proton ATPase subunit a OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=vph1 PE=3 SV=2
Length = 831
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 3 SLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
SLFRSEE++L QL+L +E+A +S LGEL + F+D
Sbjct: 4 SLFRSEEVSLVQLYLPTESARPIMSALGELSTIHFKD 40
>sp|Q8RWZ7|VHAA1_ARATH Vacuolar proton ATPase a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=1
SV=1
Length = 817
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 4 LFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
L RSE+M L QL + E+A+ ++ LGELGL+QFRD
Sbjct: 13 LMRSEKMTLVQLIIPVESAHRSITYLGELGLLQFRD 48
>sp|Q8W4S4|VHAA3_ARATH Vacuolar proton ATPase a3 OS=Arabidopsis thaliana GN=VHA-a3 PE=1
SV=1
Length = 821
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 4 LFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
L RSE M L QL + E+A+ VS LG+LGLVQF+D
Sbjct: 16 LMRSETMQLVQLIVPMESAHLTVSYLGDLGLVQFKD 51
>sp|P32563|VPH1_YEAST V-type proton ATPase subunit a, vacuolar isoform OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPH1 PE=1
SV=3
Length = 840
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 3 SLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
++FRS EMAL Q ++ E + LG+LGLVQFRD
Sbjct: 7 AIFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRD 43
>sp|Q9SJT7|VHAA2_ARATH Vacuolar proton ATPase a2 OS=Arabidopsis thaliana GN=VHA-a2 PE=1
SV=1
Length = 821
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 4 LFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
L RSE M L Q+ + E+A+ VS LG+LGLVQF+D
Sbjct: 17 LMRSEPMQLVQVIVPMESAHLTVSYLGDLGLVQFKD 52
>sp|Q01290|VPH1_NEUCR V-type proton ATPase subunit a OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vph-1 PE=3 SV=1
Length = 856
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 5 FRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
FRS +M++ QL++ +E + LGELGLV FRD
Sbjct: 9 FRSADMSMVQLYISNEIGREVCNALGELGLVHFRD 43
>sp|A8N9T6|GMT_COPC7 GDP-mannose transporter OS=Coprinopsis cinerea (strain Okayama-7
/ 130 / ATCC MYA-4618 / FGSC 9003) GN=VRG4 PE=3 SV=2
Length = 360
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 2 GSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDI 42
G+ F + LC +QS ACV + +LG++ FRD D+
Sbjct: 43 GANFSMNFLLLC---IQSSVCCACVFAVKKLGIISFRDFDM 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,570,276
Number of Sequences: 539616
Number of extensions: 1002244
Number of successful extensions: 2242
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2220
Number of HSP's gapped (non-prelim): 23
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)