BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy6532
MLIRIYKSLIRSKLDYGCPVYNSASSNSLQILNPVQNLCLRLATGAFRSSPVVSLEAETG
EPNLDIRRKILSSNYIAKTLSIENHPNIMRTLNPLYVRKYENSNMKPTIDGSKNEQGVGC
ALTIPEKDIVKRFGLNKNASIFHAELFALLQSLLTIKQLGTCKALIITDSLSCLQAIMNM
FHENPLVKRVQEELSSTESPVEFLWCPSHVGIAGNETADEEAKQAINNDVIHNELFFDEV
KIIIKKKYTEEWNTKWVNISPNENKLRKIKNSILPSS

High Scoring Gene Products

Symbol, full name Information P value

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy6532
        (277 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ASPGD|ASPL0000075333 - symbol:AN10625 species:162425 "Eme...   151  4.5e-08   1


>ASPGD|ASPL0000075333 [details] [associations]
            symbol:AN10625 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR002156 InterPro:IPR012337 Pfam:PF00075 PROSITE:PS50879
            GO:GO:0003676 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0004523
            EnsemblFungi:CADANIAT00005305 Uniprot:C8V7Z8
        Length = 486

 Score = 151 (58.2 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 55/190 (28%), Positives = 88/190 (46%)

Query:    77 AKTLSIENHPNIMRTLNPLYVRKYENSNMKPTIDGSKNEQGVGCALTIPEKDIVKR---F 133
             A+T +IE H NI+    P  +  Y         DGS     VG A   P K ++ R    
Sbjct:   165 AET-AIETHRNILNRA-PRPIALYT--------DGSGINGRVGAAAICP-KYLISRSSYM 213

Query:   134 GLNKNASIFHAELFALLQSLLTIKQLGTCKALIITDSLSCLQAIMNMFHENP--LVKRVQ 191
             G    ++++ AEL  +L +L+ I Q     A+I TD+ + LQA+ N   ++   +++ + 
Sbjct:   214 GQQSESTVYVAELQGILLALVIILQRQMQHAVIFTDNQATLQALRNPGSQSGQYILEAII 273

Query:   192 EELSSTESP---VEFLWCPSHVGIAGNETADEEAKQAINNDVIHNELFFDEVKIIIKKKY 248
               L+        V F W P+H G+ GNE AD  AK+A     I        ++  +K++ 
Sbjct:   274 MALNKGRKAGLNVHFRWIPAHRGVEGNEQADRRAKEATGWRRIRGHRGRMTIRSAVKRRA 333

Query:   249 TEEWNTKWVN 258
              E  N +W N
Sbjct:   334 HEVVNARWEN 343


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      277       277   0.00080  115 3  11 22  0.38    34
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  201 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.32u 0.15s 24.47t   Elapsed:  00:00:02
  Total cpu time:  24.32u 0.15s 24.47t   Elapsed:  00:00:02
  Start:  Thu Aug 15 16:52:59 2013   End:  Thu Aug 15 16:53:01 2013

Back to top