BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6536
(67 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPA--KCTTTSEDGVGTL 61
P + T P + G T TC GVPTP+++WRLNW HIPA + T TSE G GTL
Sbjct: 405 PPQVVTPPQQSIQASRGQTVTFTCVATGVPTPIINWRLNWGHIPAHPRVTMTSEGGRGTL 464
Query: 62 TCPDIQ 67
D++
Sbjct: 465 IIRDVK 470
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 2 TSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSW 39
TS A + + PP++T+ G C G PTP++ W
Sbjct: 1861 TSTAPVASIHPPQLTVQPGQQAEFRCSATGNPTPMLEW 1898
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPA--KCTTTSEDGVGTL 61
P + T P + G T TC +GVPTP+++WRLNW HIP+ + T TSE G GTL
Sbjct: 405 PPQVVTPPRESIQASRGQTVTFTCVAIGVPTPIINWRLNWGHIPSHPRVTVTSEGGRGTL 464
Query: 62 TCPDIQ 67
D++
Sbjct: 465 IIRDVK 470
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTCPDI 66
P + + G T + C GVP+ ++WR +P + + D + TL P I
Sbjct: 1962 PERTQVHAGRTVRLYCRAAGVPSATITWRKEGGSLPPQARSERTD-IATLLIPAI 2015
>sp|Q06561|UNC52_CAEEL Basement membrane proteoglycan OS=Caenorhabditis elegans GN=unc-52
PE=1 SV=2
Length = 3375
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 12 PPKVTLDI--GATFVITCETVGVPTPLVSWRLNWNHI--PAKCTTTSEDGVGTLTCPDIQ 67
PP+ L + G TF +TC+ V VP P ++WRLNW + P +C TSE G GTLT D Q
Sbjct: 276 PPQTNLQVPRGTTFSLTCKAVAVPEPYINWRLNWGPVCEPPRCLQTSEGGYGTLTIHDAQ 335
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 7 IKTNPP-PKVTLDIGATFVITCETVGV---PTPLVSW 39
+KTNPP PK+ + +G + CE G P P V W
Sbjct: 1977 VKTNPPGPKLIVTVGEPLQVKCEAFGAPGDPEPEVEW 2013
>sp|A2AJ76|HMCN2_MOUSE Hemicentin-2 OS=Mus musculus GN=Hmcn2 PE=1 SV=1
Length = 5100
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 9 TNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHI--PAKCTTTSEDGVGTL 61
T+PP VT+++G + +TC G P P+V+WR P + + T + G L
Sbjct: 790 TDPPQDVTVELGKSVFLTCRATGRPPPIVTWRRGDGQALEPGRGSRTGQRDSGVL 844
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWR 40
P V + + T ++ C+T GVPTPLVSWR
Sbjct: 3713 PNTVNVSVNRTTLLPCQTHGVPTPLVSWR 3741
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWRLNWN 44
P +VT+ G + CE G PTPL++W + N
Sbjct: 1076 PLRVTVKAGEEVTLDCEAQGSPTPLLTWTKDAN 1108
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAK 49
P + P +T+ G T ++C+ G+P P +SWR + +P +
Sbjct: 2195 PPAFPSKEPYTLTVTEGQTARLSCDCQGIPFPKISWRKDGQPLPGE 2240
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 11 PPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSE 55
P P VT+ G T +++C+ +G ++W +W +PA S+
Sbjct: 523 PGPNVTVSPGETAILSCQVLGETPYNLTWVRDWRALPATTGRISQ 567
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 15 VTLDIGATFVITCETVGVPTPLVSW 39
VT + +F + CE GVP P V W
Sbjct: 2396 VTATLHGSFTLLCEAAGVPAPTVQW 2420
>sp|Q8NDA2|HMCN2_HUMAN Hemicentin-2 OS=Homo sapiens GN=HMCN2 PE=2 SV=2
Length = 5065
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWR 40
PP V + + T ++ C+ GVP PLVSWR
Sbjct: 3679 PPAVNVSVNQTALLPCQADGVPAPLVSWR 3707
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 9 TNPPPKVTLDIGATFVITCETVGVPTPLVSWR 40
T P VT+++G + ++ C G P P V+WR
Sbjct: 789 TELPRDVTVELGRSALLACRATGRPPPTVTWR 820
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 11 PPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPA 48
P P VT+ G T V++C +G ++W +W +PA
Sbjct: 522 PAPNVTVSPGETAVLSCRVLGEAPYNLTWVRDWRVLPA 559
>sp|Q8AV58|SDK1_CHICK Protein sidekick-1 OS=Gallus gallus GN=SDK1 PE=2 SV=1
Length = 2169
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWR 40
PA+I+ PP T+ G T ++TCE G P P +SW+
Sbjct: 432 PAFIQ--PPEDTTVTEGMTAMLTCEVSGAPKPAISWK 466
>sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2
Length = 5635
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 9 TNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPA 48
T P V+L+ G ++C+ G+P P ++W N N IPA
Sbjct: 4263 TELPGDVSLNKGEQLRLSCKATGIPLPKLTWTFNNNIIPA 4302
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWR 40
P +I+ P V+++IG+ + C G P P + WR
Sbjct: 793 PVFIQE--PADVSMEIGSNVTLPCYVQGYPEPTIKWR 827
>sp|P11799|MYLK_CHICK Myosin light chain kinase, smooth muscle OS=Gallus gallus PE=1 SV=2
Length = 1906
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 16 TLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTCPD 65
T+ G FV+ C GVP P ++W LN I +T E GV LT D
Sbjct: 538 TVSEGQDFVLQCYVGGVPVPEITWLLNEQPIQY-AHSTFEAGVAKLTVQD 586
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 3 SPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIP 47
+PA+ T PP + + +GAT + G P P ++W N + +P
Sbjct: 27 APAF--TLPPRNIRVQLGATARFEGKVRGYPEPQITWYRNGHPLP 69
>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1
Length = 1527
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPA 48
P T+ +G FV+ C+ G P P + W+LN +P
Sbjct: 464 PQSQTIKLGKAFVLECDADGNPLPTIDWQLNGVPLPG 500
>sp|Q8BHA1|LRC24_MOUSE Leucine-rich repeat-containing protein 24 OS=Mus musculus GN=Lrrc24
PE=2 SV=1
Length = 521
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWR 40
PP+ T ++G + C+ G P PLV WR
Sbjct: 274 PPEFTANLGEDLQVACQASGYPQPLVVWR 302
>sp|P29533|VCAM1_MOUSE Vascular cell adhesion protein 1 OS=Mus musculus GN=Vcam1 PE=1
SV=1
Length = 739
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 7 IKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNH-IPAKCTTTSEDGVGTL 61
I+ +P K IG + +TC T G +PL SWR + + AK T V T+
Sbjct: 27 IEISPEYKTIAQIGDSMALTCSTTGCESPLFSWRTQIDSPLNAKVRTEGSKSVLTM 82
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWR 40
P + +P +V +G + V+TC +G +P SWR
Sbjct: 312 PFIVDISPGSQVAAQVGDSVVLTCAAIGCDSPSFSWR 348
>sp|P19320|VCAM1_HUMAN Vascular cell adhesion protein 1 OS=Homo sapiens GN=VCAM1 PE=1 SV=1
Length = 739
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLT 62
P ++ +P P++ IG + ++TC +G +P SWR + P SE TLT
Sbjct: 312 PFTVEISPGPRIAAQIGDSVMLTCSVMGCESPSFSWRTQIDS-PLSGKVRSEGTNSTLT 369
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 7 IKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLT 62
I+T P + IG + +TC T G +P SWR + P T+E TLT
Sbjct: 27 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDS-PLNGKVTNEGTTSTLT 81
>sp|G5EBF1|SAX3_CAEEL Protein sax-3 OS=Caenorhabditis elegans GN=sax-3 PE=2 SV=1
Length = 1273
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVG 59
P +T+D+GA + C G P P ++W+ +P ++D G
Sbjct: 233 PKDMTVDVGAAVLFDCRVTGDPQPQITWKRKNEPMPVTRAYIAKDNRG 280
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 11 PPPKV-------TLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTC 63
PPP + TL +G++ ++ C+ G PTP +SW + I + S+ G+L
Sbjct: 423 PPPTIEHGHQNQTLMVGSSAILPCQASGKPTPGISWLRDGLPIDITDSRISQHSTGSLHI 482
Query: 64 PDIQ 67
D++
Sbjct: 483 ADLK 486
>sp|Q6WRI0|IGS10_HUMAN Immunoglobulin superfamily member 10 OS=Homo sapiens GN=IGSF10 PE=2
SV=1
Length = 2623
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRL 41
P I PP + GA F + C +GVP P ++W +
Sbjct: 2527 PPRITNRPPRSIVTRTGAAFQLHCVALGVPKPEITWEM 2564
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGT 60
+TSP I+ + ++ G ++ C G P P + WRL P+K + VG+
Sbjct: 1938 VTSPR-IEAASQKRTEVNFGDKLLLNCSATGEPKPQIMWRL-----PSKAVVDQQHRVGS 1991
>sp|Q9ERC8|DSCAM_MOUSE Down syndrome cell adhesion molecule homolog OS=Mus musculus
GN=Dscam PE=1 SV=1
Length = 2013
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTC 63
PA I+ P +T G I C +G P + W N N +P + + GTL
Sbjct: 504 PASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKL 561
Query: 64 PDIQ 67
D+Q
Sbjct: 562 SDVQ 565
>sp|Q8VHZ8|DSCAM_RAT Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus
GN=Dscam PE=1 SV=1
Length = 2013
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTC 63
PA I+ P +T G I C +G P + W N N +P + + GTL
Sbjct: 504 PASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKL 561
Query: 64 PDIQ 67
D+Q
Sbjct: 562 SDVQ 565
>sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE=1 SV=3
Length = 18141
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 3 SPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPA-KCTTTSED 56
SP +++ P +D G ++TC+ G PTP V W N I K TT S+D
Sbjct: 6941 SPRFVEELVQPVEVMD-GEALLLTCQVTGKPTPKVEWYHNAEKITENKETTISQD 6994
>sp|O60469|DSCAM_HUMAN Down syndrome cell adhesion molecule OS=Homo sapiens GN=DSCAM PE=1
SV=2
Length = 2012
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTC 63
PA I+ P +T G I C +G P + W N N +P + + GTL
Sbjct: 504 PASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKL 561
Query: 64 PDIQ 67
D+Q
Sbjct: 562 SDVQ 565
>sp|Q9Y6N7|ROBO1_HUMAN Roundabout homolog 1 OS=Homo sapiens GN=ROBO1 PE=1 SV=1
Length = 1651
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSED 56
+ P+++K VT+D A F CE G P P V WR + +P +D
Sbjct: 259 LERPSFVKRPSNLAVTVDDSAEF--KCEARGDPVPTVRWRKDDGELPKSRYEIRDD 312
>sp|Q90W79|CNTN5_CHICK Contactin-5 OS=Gallus gallus GN=CNTN5 PE=1 SV=1
Length = 1027
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 7 IKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTCPDI 66
I+ + P VT G T + C +G P P +SW+ H P+K V L P++
Sbjct: 229 IEVHFPYTVTAARGTTVKMECFALGNPVPTISWKKVNGHNPSKARLRKSQAV--LEIPNV 286
Query: 67 Q 67
Q
Sbjct: 287 Q 287
>sp|O89026|ROBO1_MOUSE Roundabout homolog 1 OS=Mus musculus GN=Robo1 PE=1 SV=1
Length = 1612
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSED 56
+ P+++K VT+D A F CE G P P V WR + +P +D
Sbjct: 220 LERPSFVKRPSNLAVTVDDSAEF--KCEARGDPVPTVRWRKDDGELPKSRYEIRDD 273
>sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=4
Length = 34350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPA--KCTTTSEDGVGTL 61
P +IK P P + L G + C+ G P VSW L+ N I A K + DG+ T
Sbjct: 5788 PQFIK-KPSPVLVLRNGQSTTFECQITGTPKIRVSWYLDGNEITAIQKHGISFIDGLATF 5846
>sp|B4MR28|PTK7_DROWI Tyrosine-protein kinase-like otk OS=Drosophila willistoni GN=otk
PE=3 SV=1
Length = 1059
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 8 KTNPPPKVTLDIG--ATFVITCETVGVPTPLVSW 39
K + PP V ++I +T VI C+ +G P P + W
Sbjct: 481 KFSVPPNVPMEIAEQSTVVIHCQAIGDPKPTIQW 514
>sp|Q50LG9|LRC24_HUMAN Leucine-rich repeat-containing protein 24 OS=Homo sapiens GN=LRRC24
PE=2 SV=2
Length = 513
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWR 40
P ++T ++G + C+ G P PLV+WR
Sbjct: 266 PLELTANLGEDLRVACQASGYPQPLVTWR 294
>sp|Q23551|UNC22_CAEEL Twitchin OS=Caenorhabditis elegans GN=unc-22 PE=1 SV=3
Length = 7158
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 24 VITCETVGVPTPLVSWRLNWNHIP--AKCTTTSEDGVGTLTCPDI 66
V TCE VG P P W N +P ++ + DGV T ++
Sbjct: 5551 VFTCEAVGRPEPTARWLRNGRELPESSRYRFEASDGVYKFTIKEV 5595
>sp|A5PKD8|IBPL1_BOVIN Insulin-like growth factor-binding protein-like 1 OS=Bos taurus
GN=IGFBPL1 PE=2 SV=1
Length = 274
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 5 AYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWR 40
A + PP V GA ++CE VPTP+V+WR
Sbjct: 150 APVVITPPQSVHNVTGAQVYLSCEVRAVPTPVVTWR 185
>sp|P29534|VCAM1_RAT Vascular cell adhesion protein 1 OS=Rattus norvegicus GN=Vcam1 PE=2
SV=1
Length = 739
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLT 62
P + +P +V +G + V+TC VG +P SWR + P E TLT
Sbjct: 312 PFTVDISPGSQVAAQVGDSVVLTCAAVGCDSPSFSWRTQTDS-PLNGEVRDEGATSTLT 369
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 7 IKTNPPPKVTLDIGATFVITCETVGVPTPLVSWR 40
I+ +P K IG + ++TC T G +P SWR
Sbjct: 27 IEISPEYKTLAQIGDSMLLTCSTTGCESPSFSWR 60
>sp|Q52KR2|LRIG2_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Mus musculus GN=Lrig2 PE=2 SV=1
Length = 1054
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWR 40
P+++KT P +T+ GA + C G PTP +SW+
Sbjct: 601 PSFLKT--PMDLTIRTGAMARLECAAEGHPTPQISWQ 635
>sp|Q2EY15|PRTG_MOUSE Protogenin OS=Mus musculus GN=Prtg PE=2 SV=1
Length = 1191
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTCPDIQ 67
P VT + T V+ C G P P++SW +H T G G L D++
Sbjct: 235 PQNVTASLHQTVVLECMATGYPRPIISWS-RLDHKSIDVFNTRVLGNGNLIISDVK 289
>sp|Q3UH53|SDK1_MOUSE Protein sidekick-1 OS=Mus musculus GN=Sdk1 PE=2 SV=1
Length = 2193
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 3 SPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCT 51
+PA+ T P T+ G T V+ CE G P P ++W+ NHI A +
Sbjct: 461 APAF--TQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKRG-NHILASGS 506
>sp|P70232|CHL1_MOUSE Neural cell adhesion molecule L1-like protein OS=Mus musculus
GN=Chl1 PE=1 SV=2
Length = 1209
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWRLN 42
P G++ ++ CE G P P + WRLN
Sbjct: 337 PQSAVYSTGSSGILLCEAEGEPQPTIKWRLN 367
>sp|Q2VWP9|PRTG_RAT Protogenin OS=Rattus norvegicus GN=Prtg PE=2 SV=1
Length = 1193
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTCPDIQ 67
P VT + T V+ C G P P++SW +H T G G L D++
Sbjct: 236 PQNVTASLHQTVVLECMATGYPKPIISWS-RLDHKSIDVFNTRVLGNGNLIISDVK 290
>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHI 46
P +IK P P + L G + C+ G P VSW L+ N I
Sbjct: 5749 PQFIK-KPSPVLVLRNGQSTTFECQVTGTPEIRVSWYLDGNEI 5790
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPA--KCTTTSEDGVGTL 61
P++++ TL GA+ V+ C G V W L+ N I + KC ++ D V TL
Sbjct: 7629 PSFVRRLKDTSATL--GASVVLECRVSGSAPISVGWFLDGNEIISSPKCQSSFADNVCTL 7686
Query: 62 TCPDIQ 67
T ++
Sbjct: 7687 TLSSLE 7692
>sp|Q6WRH9|IGS10_RAT Immunoglobulin superfamily member 10 OS=Rattus norvegicus GN=Igsf10
PE=2 SV=1
Length = 2597
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGT 60
PA I ++T+ G+T + C G+P P VSW I A T SE G+
Sbjct: 1718 PARILDRHVKEITVHFGSTVELKCRVEGMPRPTVSW------ILANQTVVSETAKGS 1768
>sp|P17948|VGFR1_HUMAN Vascular endothelial growth factor receptor 1 OS=Homo sapiens
GN=FLT1 PE=1 SV=2
Length = 1338
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSW---RLNWNHIPAKCTTTSED 56
P +G+ ++TC G+P P + W N NH A+C S +
Sbjct: 439 PDPALYPLGSRQILTCTAYGIPQPTIKWFWHPCNHNHSEARCDFCSNN 486
>sp|Q7Z5N4|SDK1_HUMAN Protein sidekick-1 OS=Homo sapiens GN=SDK1 PE=1 SV=3
Length = 2213
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSW 39
+ P Y P +++ ++ T I C+ +GVP P + W
Sbjct: 382 IIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQW 420
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCT 51
+T+ A + T P T+ G T ++ CE G P P ++W+ NHI A +
Sbjct: 475 VTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRE-NHILASGS 524
>sp|Q7ZW34|CNTN5_DANRE Contactin-5 OS=Danio rerio GN=cntn5 PE=2 SV=1
Length = 1056
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 7 IKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTCPDI 66
I+ + P V G T + C +G P P ++WR +IP K V L P+I
Sbjct: 260 IEAHFPQTVLAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQAV--LEIPNI 317
Query: 67 Q 67
Q
Sbjct: 318 Q 318
>sp|O55005|ROBO1_RAT Roundabout homolog 1 OS=Rattus norvegicus GN=Robo1 PE=1 SV=1
Length = 1651
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSED 56
+ P+++K VT+D A F CE G P P WR + +P +D
Sbjct: 259 LERPSFVKRPSNLAVTVDDSAEF--KCEARGDPVPTFGWRKDDGELPKSRYEIRDD 312
>sp|Q92823|NRCAM_HUMAN Neuronal cell adhesion molecule OS=Homo sapiens GN=NRCAM PE=1 SV=3
Length = 1304
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNH--IPAKCTTTSEDGV 58
+ P I P +D VI CE G P P SW N H I T + G
Sbjct: 42 LVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGT 101
Query: 59 GTL 61
GTL
Sbjct: 102 GTL 104
>sp|Q28260|VCAM1_CANFA Vascular cell adhesion protein 1 OS=Canis familiaris GN=VCAM1 PE=2
SV=1
Length = 739
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 4 PAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLT 62
P ++ +P P++ IG + V+TC +P SWR + P T E TLT
Sbjct: 312 PFTVEISPGPQIIAQIGDSVVLTCGVTDCESPSFSWRTQIDS-PLSGTVKVEGAKSTLT 369
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 13 PKVTLDIGATFVITCETVGVPTPLVSWR 40
P+V IG +TC T G TP SWR
Sbjct: 33 PRVAAQIGDVISLTCSTTGCETPSFSWR 60
>sp|Q15746|MYLK_HUMAN Myosin light chain kinase, smooth muscle OS=Homo sapiens GN=MYLK
PE=1 SV=4
Length = 1914
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 20 GATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTCPD 65
G FV+ C G P P ++W LN I +T E GV L D
Sbjct: 528 GQDFVLQCSVRGTPVPRITWLLNGQPI-QYARSTCEAGVAELHIQD 572
>sp|O00533|CHL1_HUMAN Neural cell adhesion molecule L1-like protein OS=Homo sapiens
GN=CHL1 PE=1 SV=4
Length = 1208
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 9 TNPPPKVTLDIGATFVITCETVGVPTPLVSWRLN 42
T P G+ ++ CE G P P + WR+N
Sbjct: 334 TKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVN 367
>sp|Q5VST9|OBSCN_HUMAN Obscurin OS=Homo sapiens GN=OBSCN PE=1 SV=3
Length = 7968
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPA 48
P + +G ++C+ VG PTP VSW + + A
Sbjct: 16 PKAFVVSVGKDATLSCQIVGNPTPQVSWEKDQQPVAA 52
>sp|P97686|NRCAM_RAT Neuronal cell adhesion molecule OS=Rattus norvegicus GN=Nrcam PE=1
SV=2
Length = 1214
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNH--IPAKCTTTSEDGV 58
+ P I P +D VI CE G P P SW N H I T + G
Sbjct: 42 LVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGS 101
Query: 59 GTL 61
GTL
Sbjct: 102 GTL 104
>sp|Q810U4|NRCAM_MOUSE Neuronal cell adhesion molecule OS=Mus musculus GN=Nrcam PE=1
SV=2
Length = 1256
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNH--IPAKCTTTSEDGV 58
+ P I P +D VI CE G P P SW N H I T + G
Sbjct: 36 LVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGS 95
Query: 59 GTL 61
GTL
Sbjct: 96 GTL 98
>sp|Q5IS82|NTRK3_SAIBB NT-3 growth factor receptor OS=Saimiri boliviensis boliviensis
GN=NTRK3 PE=2 SV=1
Length = 825
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 17/66 (25%)
Query: 15 VTLDIGATFVITCETVGVPTPLVSW-------------RLNWNHIPAKCTT----TSEDG 57
+T+ G + VITC G P P V W LNW ++ A T TSED
Sbjct: 219 LTVREGDSAVITCNGSGSPLPDVDWIVTGLQSINTHQTNLNWTNVHAINLTLVNVTSEDN 278
Query: 58 VGTLTC 63
TLTC
Sbjct: 279 GFTLTC 284
>sp|P31398|HEMO_MANSE Hemolin OS=Manduca sexta PE=2 SV=2
Length = 413
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGT 60
++ P + K P +V G FVI CE +P VSW N I S G
Sbjct: 324 VSGPRFTK-KPEKQVIAKQGQDFVIPCEVSALPAAPVSWTFNAKPISGSRVVASPSG--- 379
Query: 61 LTCPDIQ 67
LT IQ
Sbjct: 380 LTIKGIQ 386
>sp|Q3V1M1|IGS10_MOUSE Immunoglobulin superfamily member 10 OS=Mus musculus GN=Igsf10 PE=2
SV=2
Length = 2594
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1 MTSPAYIKTNPPPKVTLDIGATFVITCETVGVPTPLVSWRLNWNHI 46
+T+ I+ N V + G T V+ CE G P P V W L N++
Sbjct: 2108 LTAIPRIRQNYRSNVRIKAGDTAVLDCEVTGEPKPNVFWLLPSNNV 2153
>sp|A2AAJ9|OBSCN_MOUSE Obscurin OS=Mus musculus GN=Obscn PE=2 SV=2
Length = 8891
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 12 PPKVTLDIGATFVITCETVGVPTPLVSW 39
P + +G ++C+ VG PTP VSW
Sbjct: 15 PKAFVVSVGKDATLSCQIVGNPTPHVSW 42
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 16 TLDIGATFVITCETVGVPTPLVSW 39
T ++G T + C G P P+VSW
Sbjct: 6964 TAELGETVKLACRVTGTPKPIVSW 6987
>sp|Q6PDN3|MYLK_MOUSE Myosin light chain kinase, smooth muscle OS=Mus musculus GN=Mylk
PE=1 SV=3
Length = 1941
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 20 GATFVITCETVGVPTPLVSWRLNWNHIPAKCTTTSEDGVGTLTCPD 65
G FV+ C G P P V+W LN I + E GV L D
Sbjct: 516 GQDFVLRCSVQGTPAPRVTWLLNGQPIQF-AHSICEAGVAELHIQD 560
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,935,768
Number of Sequences: 539616
Number of extensions: 1027118
Number of successful extensions: 2709
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 2168
Number of HSP's gapped (non-prelim): 597
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)