RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy6537
         (66 letters)



>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich
          repeat, ligand binding domain, calcium CAGE, ligand
          binding protein; NMR {Rattus norvegicus}
          Length = 48

 Score = 50.0 bits (120), Expect = 9e-11
 Identities = 17/40 (42%), Positives = 23/40 (57%)

Query: 25 PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
            ++C  ++F C D   C+    RC+GV DCRD SDE  C
Sbjct: 3  MVLNCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGC 42


>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling
          protein; NMR {Homo sapiens}
          Length = 43

 Score = 48.9 bits (117), Expect = 3e-10
 Identities = 17/40 (42%), Positives = 23/40 (57%)

Query: 26 TVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCG 65
           V C+   F C +  +C+P    CNGV DC + +DE NCG
Sbjct: 4  DVKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNCG 43


>1cr8_A Protein (LOW density lipoprotein receptor related protein);
          ligand binding, calcium binding, LDLR, LRP, lipid
          binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
          Length = 42

 Score = 46.1 bits (110), Expect = 3e-09
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 28 SCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
           C   EF C     C+PL  RC+G +DC D SDE +C
Sbjct: 3  GCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSC 39


>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand
          binding module, ligand binding repeat, compleme repeat,
          protein binding; NMR {Homo sapiens}
          Length = 50

 Score = 44.3 bits (105), Expect = 2e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 25 PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCG 65
             +C  S FSC     CVP    C+G  DC D +DE    
Sbjct: 3  EGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAA 43


>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein
          complex, RAP, escort protein, calcium- binding; 1.26A
          {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
          Length = 80

 Score = 45.0 bits (107), Expect = 2e-08
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 25 PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
          P ++C  + F C+    C+P    C+   DC D SDE   
Sbjct: 38 PVLTCGPASFQCNSS-TCIPQLWACDNDPDCEDGSDEWPQ 76



 Score = 44.2 bits (105), Expect = 4e-08
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 28 SCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCGK 66
          +C+ +EF CHD  +C+     C+   DC D SDE +C  
Sbjct: 2  TCSQAEFRCHDG-KCISRQFVCDSDRDCLDGSDEASCPV 39


>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor,
          cysteine-rich module, calcium; 1.70A {Homo sapiens}
          SCOP: g.12.1.1
          Length = 37

 Score = 43.3 bits (103), Expect = 3e-08
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 29 CAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCG 65
          C+  EF C    +C+  S RC+G  DC+D SDE NC 
Sbjct: 2  CSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEENCA 37


>3a7q_B Low-density lipoprotein receptor-related protein; signaling
          protein; HET: NAG; 2.60A {Homo sapiens}
          Length = 44

 Score = 42.3 bits (100), Expect = 1e-07
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 25 PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCGK 66
          P   C   +F C +  +C+P   RC+   DC D+SDE +C K
Sbjct: 4  PAKECEKDQFQCRNE-RCIPSVWRCDEDDDCLDHSDEDDCPK 44


>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding
          module, COMP repeat, calcium, cell membrane, coated
          PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
          Length = 80

 Score = 43.3 bits (102), Expect = 1e-07
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 25 PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCG 65
             +C  S FSC     CVP    C+G  DC D +DE    
Sbjct: 5  EGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAA 45


>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor,
          virus-protein complex, icosahedral virus, ATP-binding,
          capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB:
          1v9u_5*
          Length = 39

 Score = 42.0 bits (99), Expect = 1e-07
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 29 CAWSEFSCHDRL-QCVPLSARCNGVSDCRDYSDEVNCG 65
          C   E SC     QC+P+S RC+G +DC    DE NCG
Sbjct: 1  CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38


>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta
          hairpin, 3-10 helix, calcium binding, membrane protein;
          NMR {Coturnix coturnix} SCOP: g.12.1.1
          Length = 47

 Score = 41.3 bits (97), Expect = 3e-07
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 28 SCAWSEFSCHDRL----QCVPLSARCNGVSDCRDYSDEVNCG 65
          SC   +F C +      +C P    C+G  DC D  DE  CG
Sbjct: 6  SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 47


>2fyj_A Low-density lipoprotein receptor-related protein 1; double
          module, complement type repeat, calcium, beta-2
          hairpin, loop-structures; NMR {Homo sapiens} PDB:
          2fyl_B
          Length = 82

 Score = 42.3 bits (100), Expect = 3e-07
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 29 CAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
             ++F+C++  +C+ ++ RC+  +DC D SDE  C
Sbjct: 46 FPLTQFTCNNG-RCININWRCDNDNDCGDNSDEAGC 80



 Score = 40.3 bits (95), Expect = 1e-06
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 28 SCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
          +C  ++FSC    +C+P+S  C+   DC D SDE   
Sbjct: 4  TCPPNQFSCASG-RCIPISWTCDLDDDCGDRSDESAS 39


>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800
          and PG950; disulfide bond, alpha helix, calcium CAGE,
          signaling protein; NMR {Coturnix japonica} SCOP:
          g.12.1.1
          Length = 47

 Score = 41.3 bits (97), Expect = 3e-07
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 26 TVSCAWSEFSCHDRL----QCVPLSARCNGVSDCRDYSDEVNCG 65
          +  C   +F C +      +C P    C+G  DC D  DE  CG
Sbjct: 2  SSRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 45


>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand
          binding, calcium binding, complement-like repeat, LRP
          receptor, signaling protein; 1.85A {Homo sapiens} SCOP:
          g.12.1.1
          Length = 44

 Score = 40.7 bits (96), Expect = 4e-07
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 28 SCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
          SC+ ++F C+   +C+P    C+G +DC DYSDE + 
Sbjct: 4  SCSSTQFKCNSG-RCIPEHWTCDGDNDCGDYSDETHA 39


>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium
          binding, complement-like repeat, signaling protein; NMR
          {Homo sapiens} SCOP: g.12.1.1
          Length = 45

 Score = 40.0 bits (94), Expect = 7e-07
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 25 PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
              C   EF+C +  +C+    +C+G +DC D SDE   
Sbjct: 2  SPPQCQPGEFACANS-RCIQERWKCDGDNDCLDNSDEAPA 40


>1n7d_A LDL receptor, low-density lipoprotein receptor; familial
           hypercholesterolemia, cholestero metabolism, lipid
           transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens}
           SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1
           g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A
           1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
          Length = 699

 Score = 40.2 bits (93), Expect = 9e-06
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 16  PPVTTPAYYPTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
              +        +C   EF C D   C+  S +C+   DC+D SDEV C
Sbjct: 202 KDKSDEENCAVATCRPDEFQCSDG-NCIHGSRQCDREYDCKDMSDEVGC 249



 Score = 39.4 bits (91), Expect = 2e-05
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 20 TPAYYPTVSCAWSEFSCHDRL-QCVPLSARCNGVSDCRDYSDEVNC 64
          +     +V+C   +FSC  R+ +C+P   RC+G  DC + SDE  C
Sbjct: 38 SQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 83



 Score = 34.4 bits (78), Expect = 0.001
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 29 CAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
          C  +EF C D  +C+     C+G ++C+D SDE   
Sbjct: 6  CERNEFQCQDG-KCISYKWVCDGSAECQDGSDESQE 40



 Score = 33.6 bits (76), Expect = 0.002
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 25  PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
           P ++C  + F C+    C+P    C+   DC D SDE   
Sbjct: 123 PVLTCGPASFQCNSS-TCIPQLWACDNDPDCEDGSDEWPQ 161



 Score = 33.6 bits (76), Expect = 0.002
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 25  PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
           P  +C+  EF CHD  +C+     C+   DC D SDE +C
Sbjct: 84  PPKTCSQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEASC 122



 Score = 33.2 bits (75), Expect = 0.002
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 25  PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
            T+    ++F CH   +C+ L   CN   DCRD+SDE   
Sbjct: 252 VTLCEGPNKFKCHSG-ECITLDKVCNMARDCRDWSDEPIK 290



 Score = 32.5 bits (73), Expect = 0.005
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 25  PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCG 65
            +  C+  EF C    +C+  S RC+G  DC+D SDE NC 
Sbjct: 172 DSSPCSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEENCA 211


>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex,
           beta propeller, cholesterol clearance, PCSK
           autocatalytic cleavage; 7.01A {Homo sapiens}
          Length = 791

 Score = 39.8 bits (92), Expect = 1e-05
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 20  TPAYYPTVSCAWSEFSCHDRL-QCVPLSARCNGVSDCRDYSDEVNC 64
           +     +V+C   +FSC  R+ +C+P   RC+G  DC + SDE  C
Sbjct: 56  SQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 101



 Score = 37.1 bits (85), Expect = 1e-04
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 25  PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCG 65
            +  C+  EF C    +C+  S RC+G  DC+D SDE NC 
Sbjct: 190 DSSPCSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEENCA 229



 Score = 36.0 bits (82), Expect = 2e-04
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 25  PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
           P  +C+  EF CHD  +C+     C+   DC D SDE +C
Sbjct: 102 PPKTCSQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEASC 140



 Score = 35.6 bits (81), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 29 CAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCG 65
          C  +EF C D  +C+     C+G ++C+D SDE    
Sbjct: 24 CERNEFQCQDG-KCISYKWVCDGSAECQDGSDESQET 59



 Score = 34.8 bits (79), Expect = 6e-04
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 25  PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCG 65
           P ++C  + F C+    C+P    C+   DC D SDE    
Sbjct: 141 PVLTCGPASFQCNSS-TCIPQLWACDNDPDCEDGSDEWPQR 180



 Score = 34.4 bits (78), Expect = 0.001
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 25  PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
              +C   EF C D   C+  S +C+   DC+D SDEV C
Sbjct: 229 AVATCRPDEFQCSDG-NCIHGSRQCDREYDCKDMSDEVGC 267



 Score = 32.9 bits (74), Expect = 0.003
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 20  TPAYYPTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
                 T+    ++F CH   +C+ L   CN   DCRD+SDE   
Sbjct: 265 VGCVNVTLCEGPNKFKCHSG-ECITLDKVCNMARDCRDWSDEPIK 308


>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid
          erythrocruorins, respiratory protein, hexagonal
          bilayer, dihedral D6 symmetry; HET: HEM; 3.50A
          {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
          Length = 215

 Score = 38.7 bits (89), Expect = 2e-05
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 27 VSCAWSEFSCHDRL-QCVPLSARCNGVSDCRDYSDEVNCG 65
           SC   E  C     QC+     C+G +DCR+  DE +C 
Sbjct: 53 PSCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDCT 92


>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
           activating factor, S protease, complement system; HET:
           NAG; 2.69A {Homo sapiens}
          Length = 565

 Score = 37.2 bits (86), Expect = 1e-04
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 28  SCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
           S     F C +  + +     C+G++DC D SDE+ C
Sbjct: 203 SPMDDFFQCVNG-KYISQMKACDGINDCGDQSDELCC 238



 Score = 26.8 bits (59), Expect = 0.52
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 27  VSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
            +C    F C   + C+P   +CNG  DC    DEV C
Sbjct: 239 KACQGKGFHCKSGV-CIPSQYQCNGEVDCITGEDEVGC 275



 Score = 25.6 bits (56), Expect = 1.1
 Identities = 7/47 (14%), Positives = 8/47 (17%), Gaps = 4/47 (8%)

Query: 24  YPTVSCAWSEFSCH----DRLQCVPLSARCNGVSDCRDYSDEVNCGK 66
               S       C        +C     R  G  D  D         
Sbjct: 156 LSINSTECLHVHCRGLETSLAECTFTKRRTMGYQDFADVVCYTQKAD 202


>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory
          protein, hexagonal bilayer, dihedral D6 symmetry; HET:
          HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1
          g.12.1.1 h.1.32.1
          Length = 217

 Score = 33.3 bits (75), Expect = 0.002
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 28 SCAWSEFSCH-DRLQCVPLSARCNGVSDCRDYSDE 61
           C   E  C  D  +C+     C+G  DCRD SDE
Sbjct: 53 HCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDE 87


>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid
          erythrocruorins, respiratory protein, hexagonal
          bilayer, dihedral D6 symmetry; HET: HEM; 3.50A
          {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
          Length = 220

 Score = 32.2 bits (72), Expect = 0.005
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 28 SCAWSEFSC-HDRLQCVPLSARCNGVSDCRDYSDE 61
           C    F C  +  +C+     C+G  DC +  DE
Sbjct: 52 HCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDE 86


>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune
           system; HET: TPO BMA; 2.51A {Homo sapiens}
          Length = 554

 Score = 30.3 bits (67), Expect = 0.028
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 25  PTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNCGK 66
              +    +F C +  +C+     CNG  DC D SDE +C  
Sbjct: 61  VRQAQCGQDFQCKETGRCLKRHLVCNGDQDCLDGSDEDDCED 102


>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune
           system; HET: TPO BMA; 2.51A {Homo sapiens}
          Length = 537

 Score = 25.2 bits (54), Expect = 1.6
 Identities = 15/37 (40%), Positives = 17/37 (45%)

Query: 28  SCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
                 F C    +CV     CNG +DC D SDE NC
Sbjct: 65  QVRCEGFVCAQTGRCVNRRLLCNGDNDCGDQSDEANC 101


>3t5o_A Complement component C6; macpf, MAC, membrane attack complex,
           innate IMMU system, blood, membrane, cytolysin, immune
           SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens}
           PDB: 4a5w_B* 4e0s_B*
          Length = 913

 Score = 25.2 bits (54), Expect = 2.0
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 5   RLCLGCATSYVPPVTTPAYYPTVSCAWSEFSCHDRLQCVPLSARCNGVSDCRDYSDEVNC 64
           + C     ++ P + +       +   ++F C    +C+     CNG +DC D SDE +C
Sbjct: 94  QPCTAPLVAFQPCIPSKLCKIEEADCKNKFRCDSG-RCIARKLECNGENDCGDNSDERDC 152

Query: 65  GK 66
           G+
Sbjct: 153 GR 154


>3tia_A Neuraminidase; 6-bladed beta-propeller, calcium binding,
           glycosylation, ANT hydrolase-hydrolase inhibitor
           complex; HET: NAG BMA MAN LNV; 1.80A {Influenza a virus}
           PDB: 3tib_A* 3tic_A* 2bat_A* 1ivd_A* 1inh_A* 1inw_A*
           1inx_A* 1ivc_A* 1ing_A* 1ive_A* 1ivf_A* 1ivg_A* 1nn2_A*
           2aep_A* 2aeq_A*
          Length = 469

 Score = 23.9 bits (51), Expect = 6.0
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 17  PVTTPAYYPT--VSCAWSEFSCHD 38
            +  P +  T  V  AWS  SCHD
Sbjct: 162 ELGVPFHLGTRQVCIAWSSSSCHD 185


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.324    0.136    0.484 

Gapped
Lambda     K      H
   0.267   0.0531    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,016,267
Number of extensions: 43630
Number of successful extensions: 172
Number of sequences better than 10.0: 1
Number of HSP's gapped: 158
Number of HSP's successfully gapped: 52
Length of query: 66
Length of database: 6,701,793
Length adjustment: 37
Effective length of query: 29
Effective length of database: 5,668,716
Effective search space: 164392764
Effective search space used: 164392764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (23.9 bits)